Multiple sequence alignment - TraesCS2A01G021700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G021700 chr2A 100.000 3305 0 0 1 3305 10464069 10467373 0.000000e+00 6104
1 TraesCS2A01G021700 chr2D 92.009 2753 144 29 346 3040 10309546 10312280 0.000000e+00 3795
2 TraesCS2A01G021700 chr2D 87.017 1448 151 18 975 2411 19544869 19543448 0.000000e+00 1598
3 TraesCS2A01G021700 chr2D 89.096 1073 112 3 1251 2323 19245513 19244446 0.000000e+00 1328
4 TraesCS2A01G021700 chr2D 92.453 212 15 1 29 240 10308079 10308289 5.360000e-78 302
5 TraesCS2A01G021700 chr2B 88.044 1447 141 21 976 2411 38841521 38842946 0.000000e+00 1685
6 TraesCS2A01G021700 chr2B 88.683 1352 134 14 999 2347 4482080 4483415 0.000000e+00 1631
7 TraesCS2A01G021700 chr3D 87.536 1396 146 15 975 2359 589696099 589697477 0.000000e+00 1589
8 TraesCS2A01G021700 chrUn 85.989 1456 169 20 975 2411 169570792 169572231 0.000000e+00 1526
9 TraesCS2A01G021700 chrUn 84.683 1025 145 7 1293 2305 2359 1335 0.000000e+00 1013
10 TraesCS2A01G021700 chrUn 84.083 578 62 16 975 1530 391746556 391747125 6.280000e-147 531
11 TraesCS2A01G021700 chr1B 85.989 1456 169 20 975 2411 44790128 44788689 0.000000e+00 1526


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G021700 chr2A 10464069 10467373 3304 False 6104.0 6104 100.000 1 3305 1 chr2A.!!$F1 3304
1 TraesCS2A01G021700 chr2D 10308079 10312280 4201 False 2048.5 3795 92.231 29 3040 2 chr2D.!!$F1 3011
2 TraesCS2A01G021700 chr2D 19543448 19544869 1421 True 1598.0 1598 87.017 975 2411 1 chr2D.!!$R2 1436
3 TraesCS2A01G021700 chr2D 19244446 19245513 1067 True 1328.0 1328 89.096 1251 2323 1 chr2D.!!$R1 1072
4 TraesCS2A01G021700 chr2B 38841521 38842946 1425 False 1685.0 1685 88.044 976 2411 1 chr2B.!!$F2 1435
5 TraesCS2A01G021700 chr2B 4482080 4483415 1335 False 1631.0 1631 88.683 999 2347 1 chr2B.!!$F1 1348
6 TraesCS2A01G021700 chr3D 589696099 589697477 1378 False 1589.0 1589 87.536 975 2359 1 chr3D.!!$F1 1384
7 TraesCS2A01G021700 chrUn 169570792 169572231 1439 False 1526.0 1526 85.989 975 2411 1 chrUn.!!$F1 1436
8 TraesCS2A01G021700 chrUn 1335 2359 1024 True 1013.0 1013 84.683 1293 2305 1 chrUn.!!$R1 1012
9 TraesCS2A01G021700 chrUn 391746556 391747125 569 False 531.0 531 84.083 975 1530 1 chrUn.!!$F2 555
10 TraesCS2A01G021700 chr1B 44788689 44790128 1439 True 1526.0 1526 85.989 975 2411 1 chr1B.!!$R1 1436

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
20 21 0.036388 TGGAACTGTCGATTGGCCTC 60.036 55.0 3.32 0.0 0.0 4.70 F
39 40 0.179100 CTATGTCACTCCGCCACCAG 60.179 60.0 0.00 0.0 0.0 4.00 F
593 1753 0.249953 TGCGGCGGTTTTCAGAAGTA 60.250 50.0 9.78 0.0 0.0 2.24 F
1869 3076 0.179084 CCACGATACCAGCAACCGAT 60.179 55.0 0.00 0.0 0.0 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1143 2315 0.550914 TGAGGTGTTGGCTCTTGGTT 59.449 50.000 0.0 0.0 0.0 3.67 R
1326 2527 1.076014 TAGCTCCTCCGTGTGGTGA 59.924 57.895 0.0 0.0 36.3 4.02 R
2113 3323 0.328592 TACTCTCTCAGCACGGTCCT 59.671 55.000 0.0 0.0 0.0 3.85 R
2751 4010 0.037232 GAGTCCGCTGCCAAGTTAGT 60.037 55.000 0.0 0.0 0.0 2.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.941210 TTGGAACTGTCGATTGGCC 58.059 52.632 0.00 0.00 0.00 5.36
19 20 0.400213 TTGGAACTGTCGATTGGCCT 59.600 50.000 3.32 0.00 0.00 5.19
20 21 0.036388 TGGAACTGTCGATTGGCCTC 60.036 55.000 3.32 0.00 0.00 4.70
21 22 0.250513 GGAACTGTCGATTGGCCTCT 59.749 55.000 3.32 0.00 0.00 3.69
22 23 1.480954 GGAACTGTCGATTGGCCTCTA 59.519 52.381 3.32 0.00 0.00 2.43
23 24 2.103263 GGAACTGTCGATTGGCCTCTAT 59.897 50.000 3.32 0.00 0.00 1.98
24 25 2.898729 ACTGTCGATTGGCCTCTATG 57.101 50.000 3.32 0.00 0.00 2.23
25 26 2.111384 ACTGTCGATTGGCCTCTATGT 58.889 47.619 3.32 0.00 0.00 2.29
26 27 2.101582 ACTGTCGATTGGCCTCTATGTC 59.898 50.000 3.32 0.00 0.00 3.06
27 28 2.101415 CTGTCGATTGGCCTCTATGTCA 59.899 50.000 3.32 0.00 0.00 3.58
28 29 2.159099 TGTCGATTGGCCTCTATGTCAC 60.159 50.000 3.32 0.00 0.00 3.67
29 30 2.101582 GTCGATTGGCCTCTATGTCACT 59.898 50.000 3.32 0.00 0.00 3.41
30 31 2.362397 TCGATTGGCCTCTATGTCACTC 59.638 50.000 3.32 0.00 0.00 3.51
31 32 2.546795 CGATTGGCCTCTATGTCACTCC 60.547 54.545 3.32 0.00 0.00 3.85
32 33 0.824109 TTGGCCTCTATGTCACTCCG 59.176 55.000 3.32 0.00 0.00 4.63
33 34 1.068250 GGCCTCTATGTCACTCCGC 59.932 63.158 0.00 0.00 0.00 5.54
34 35 1.068250 GCCTCTATGTCACTCCGCC 59.932 63.158 0.00 0.00 0.00 6.13
35 36 1.676678 GCCTCTATGTCACTCCGCCA 61.677 60.000 0.00 0.00 0.00 5.69
39 40 0.179100 CTATGTCACTCCGCCACCAG 60.179 60.000 0.00 0.00 0.00 4.00
62 63 3.627577 TGTCTTTCTTTGAACAGTGCCTC 59.372 43.478 0.00 0.00 0.00 4.70
76 77 2.584608 CCTCGACCCATCCACCAC 59.415 66.667 0.00 0.00 0.00 4.16
103 104 1.447317 AAGCGTCCACAACCAGCTTG 61.447 55.000 0.00 0.00 45.12 4.01
136 137 2.498726 CTGCGAAGAGGAGGAGGC 59.501 66.667 0.00 0.00 34.34 4.70
143 144 2.821245 CGAAGAGGAGGAGGCTATGGAT 60.821 54.545 0.00 0.00 0.00 3.41
146 147 1.905894 GAGGAGGAGGCTATGGATTCC 59.094 57.143 0.00 0.00 0.00 3.01
148 149 1.349357 GGAGGAGGCTATGGATTCCAC 59.651 57.143 7.76 0.00 35.80 4.02
155 156 1.599542 GCTATGGATTCCACAAGCGTC 59.400 52.381 20.34 2.98 36.56 5.19
163 164 3.767230 CACAAGCGTCGCTGACCG 61.767 66.667 22.50 12.19 39.62 4.79
172 173 4.337060 CGCTGACCGGTCGTGTCA 62.337 66.667 28.70 11.39 40.28 3.58
197 198 2.624838 CCTAATGGATGATGTGCCCAAC 59.375 50.000 0.00 0.00 33.15 3.77
218 219 0.683412 GCGGAGGTATATTCCCGGTT 59.317 55.000 0.00 0.00 42.02 4.44
240 241 3.269381 TCTCCCCTCTATGCCATTTGTTT 59.731 43.478 0.00 0.00 0.00 2.83
242 243 3.099141 CCCCTCTATGCCATTTGTTTGT 58.901 45.455 0.00 0.00 0.00 2.83
244 245 3.763360 CCCTCTATGCCATTTGTTTGTGA 59.237 43.478 0.00 0.00 0.00 3.58
245 246 4.403432 CCCTCTATGCCATTTGTTTGTGAT 59.597 41.667 0.00 0.00 0.00 3.06
246 247 5.345702 CCTCTATGCCATTTGTTTGTGATG 58.654 41.667 0.00 0.00 0.00 3.07
247 248 5.105635 CCTCTATGCCATTTGTTTGTGATGT 60.106 40.000 0.00 0.00 0.00 3.06
250 251 2.433604 TGCCATTTGTTTGTGATGTGGT 59.566 40.909 0.00 0.00 0.00 4.16
251 252 3.638627 TGCCATTTGTTTGTGATGTGGTA 59.361 39.130 0.00 0.00 0.00 3.25
252 253 4.100035 TGCCATTTGTTTGTGATGTGGTAA 59.900 37.500 0.00 0.00 0.00 2.85
254 255 5.229423 CCATTTGTTTGTGATGTGGTAAGG 58.771 41.667 0.00 0.00 0.00 2.69
255 256 5.221422 CCATTTGTTTGTGATGTGGTAAGGT 60.221 40.000 0.00 0.00 0.00 3.50
256 257 5.923733 TTTGTTTGTGATGTGGTAAGGTT 57.076 34.783 0.00 0.00 0.00 3.50
257 258 5.923733 TTGTTTGTGATGTGGTAAGGTTT 57.076 34.783 0.00 0.00 0.00 3.27
258 259 5.508200 TGTTTGTGATGTGGTAAGGTTTC 57.492 39.130 0.00 0.00 0.00 2.78
259 260 4.950475 TGTTTGTGATGTGGTAAGGTTTCA 59.050 37.500 0.00 0.00 0.00 2.69
261 262 4.431416 TGTGATGTGGTAAGGTTTCAGT 57.569 40.909 0.00 0.00 0.00 3.41
262 263 5.554437 TGTGATGTGGTAAGGTTTCAGTA 57.446 39.130 0.00 0.00 0.00 2.74
263 264 5.302360 TGTGATGTGGTAAGGTTTCAGTAC 58.698 41.667 0.00 0.00 0.00 2.73
264 265 4.694037 GTGATGTGGTAAGGTTTCAGTACC 59.306 45.833 0.00 0.00 38.23 3.34
265 266 4.348461 TGATGTGGTAAGGTTTCAGTACCA 59.652 41.667 0.00 0.00 43.91 3.25
266 267 4.774660 TGTGGTAAGGTTTCAGTACCAA 57.225 40.909 3.45 0.00 46.70 3.67
267 268 4.710324 TGTGGTAAGGTTTCAGTACCAAG 58.290 43.478 3.45 0.00 46.70 3.61
268 269 4.409574 TGTGGTAAGGTTTCAGTACCAAGA 59.590 41.667 3.45 0.00 46.70 3.02
269 270 4.753610 GTGGTAAGGTTTCAGTACCAAGAC 59.246 45.833 3.45 0.00 46.70 3.01
271 272 5.840149 TGGTAAGGTTTCAGTACCAAGACTA 59.160 40.000 0.00 0.00 43.32 2.59
272 273 6.499350 TGGTAAGGTTTCAGTACCAAGACTAT 59.501 38.462 0.00 0.00 43.32 2.12
273 274 7.040494 GGTAAGGTTTCAGTACCAAGACTATC 58.960 42.308 0.00 0.00 40.82 2.08
274 275 6.681729 AAGGTTTCAGTACCAAGACTATCA 57.318 37.500 0.00 0.00 40.82 2.15
277 278 6.213600 AGGTTTCAGTACCAAGACTATCATGT 59.786 38.462 0.00 0.00 40.82 3.21
279 280 5.011090 TCAGTACCAAGACTATCATGTGC 57.989 43.478 0.00 0.00 0.00 4.57
280 281 4.711846 TCAGTACCAAGACTATCATGTGCT 59.288 41.667 0.00 0.00 0.00 4.40
281 282 5.891551 TCAGTACCAAGACTATCATGTGCTA 59.108 40.000 0.00 0.00 0.00 3.49
283 284 5.894393 AGTACCAAGACTATCATGTGCTAGT 59.106 40.000 0.00 0.00 30.50 2.57
284 285 5.269505 ACCAAGACTATCATGTGCTAGTC 57.730 43.478 13.44 13.44 41.55 2.59
285 286 4.100189 ACCAAGACTATCATGTGCTAGTCC 59.900 45.833 16.29 4.04 41.94 3.85
286 287 4.100035 CCAAGACTATCATGTGCTAGTCCA 59.900 45.833 16.29 0.00 41.94 4.02
287 288 4.927978 AGACTATCATGTGCTAGTCCAC 57.072 45.455 16.29 0.00 41.94 4.02
288 289 4.541705 AGACTATCATGTGCTAGTCCACT 58.458 43.478 16.29 1.24 41.94 4.00
289 290 5.696030 AGACTATCATGTGCTAGTCCACTA 58.304 41.667 16.29 0.00 41.94 2.74
290 291 5.767665 AGACTATCATGTGCTAGTCCACTAG 59.232 44.000 16.29 9.12 46.63 2.57
302 439 4.273300 AGTCCACTAGCTAATCTTCCCT 57.727 45.455 0.00 0.00 0.00 4.20
303 440 5.405063 AGTCCACTAGCTAATCTTCCCTA 57.595 43.478 0.00 0.00 0.00 3.53
308 445 5.420739 CCACTAGCTAATCTTCCCTATCCTC 59.579 48.000 0.00 0.00 0.00 3.71
309 446 6.252995 CACTAGCTAATCTTCCCTATCCTCT 58.747 44.000 0.00 0.00 0.00 3.69
311 448 4.424842 AGCTAATCTTCCCTATCCTCTGG 58.575 47.826 0.00 0.00 0.00 3.86
313 450 2.037385 ATCTTCCCTATCCTCTGGCC 57.963 55.000 0.00 0.00 0.00 5.36
319 456 1.006043 CCCTATCCTCTGGCCGATCTA 59.994 57.143 0.00 0.00 0.00 1.98
320 457 2.358721 CCCTATCCTCTGGCCGATCTAT 60.359 54.545 0.00 0.00 0.00 1.98
322 459 0.901124 ATCCTCTGGCCGATCTATGC 59.099 55.000 0.00 0.00 0.00 3.14
323 460 0.469892 TCCTCTGGCCGATCTATGCA 60.470 55.000 0.00 0.00 0.00 3.96
324 461 0.612229 CCTCTGGCCGATCTATGCAT 59.388 55.000 3.79 3.79 0.00 3.96
325 462 1.405256 CCTCTGGCCGATCTATGCATC 60.405 57.143 0.19 0.00 0.00 3.91
326 463 1.549620 CTCTGGCCGATCTATGCATCT 59.450 52.381 0.19 0.00 0.00 2.90
327 464 2.757314 CTCTGGCCGATCTATGCATCTA 59.243 50.000 0.19 0.00 0.00 1.98
342 479 2.996631 CATCTATGCCCTAGCCAATCC 58.003 52.381 0.00 0.00 38.69 3.01
343 480 2.116869 TCTATGCCCTAGCCAATCCA 57.883 50.000 0.00 0.00 38.69 3.41
450 1609 4.305989 TGATGTTTCTCTTGCCAAACAC 57.694 40.909 0.00 0.00 43.48 3.32
538 1698 0.320334 TGAGAAATCGCGTCCTTGCA 60.320 50.000 5.77 0.00 34.15 4.08
540 1700 0.320771 AGAAATCGCGTCCTTGCAGT 60.321 50.000 5.77 0.00 34.15 4.40
556 1716 4.057406 TGCAGTGGTTTTGAGAAAATGG 57.943 40.909 0.00 0.00 32.22 3.16
569 1729 2.372837 AGAAAATGGTGGGCAAAGCAAT 59.627 40.909 0.00 0.00 0.00 3.56
574 1734 0.686789 GGTGGGCAAAGCAATTCCTT 59.313 50.000 0.00 0.00 0.00 3.36
591 1751 0.385974 CTTGCGGCGGTTTTCAGAAG 60.386 55.000 9.78 0.00 0.00 2.85
593 1753 0.249953 TGCGGCGGTTTTCAGAAGTA 60.250 50.000 9.78 0.00 0.00 2.24
595 1755 1.136057 GCGGCGGTTTTCAGAAGTAAG 60.136 52.381 9.78 0.00 0.00 2.34
598 1758 1.136057 GCGGTTTTCAGAAGTAAGCCG 60.136 52.381 4.65 4.65 46.40 5.52
600 1760 3.000727 CGGTTTTCAGAAGTAAGCCGAT 58.999 45.455 3.19 0.00 46.53 4.18
641 1801 5.009610 ACTTGGAAAATATGCACTTGTCGTT 59.990 36.000 0.00 0.00 0.00 3.85
721 1882 1.846007 ACTTGCCACCTTGTTGTTCA 58.154 45.000 0.00 0.00 0.00 3.18
722 1883 2.175202 ACTTGCCACCTTGTTGTTCAA 58.825 42.857 0.00 0.00 34.61 2.69
789 1950 4.827835 CCCTCTCGTCCATCTCAATAAGTA 59.172 45.833 0.00 0.00 0.00 2.24
791 1952 5.533154 CCTCTCGTCCATCTCAATAAGTACT 59.467 44.000 0.00 0.00 0.00 2.73
839 2004 6.823689 TCTGTTTTTGATTCCCATCTAGTAGC 59.176 38.462 0.00 0.00 0.00 3.58
859 2024 3.315191 AGCGCAAAGAAGCTTTTGTCTTA 59.685 39.130 11.47 0.00 41.52 2.10
868 2033 4.917906 AGCTTTTGTCTTACTCTCCCAT 57.082 40.909 0.00 0.00 0.00 4.00
948 2113 8.119845 TGTAATTGATGTTGTCGTATGTATTGC 58.880 33.333 0.00 0.00 0.00 3.56
949 2114 5.478233 TTGATGTTGTCGTATGTATTGCC 57.522 39.130 0.00 0.00 0.00 4.52
950 2115 4.508662 TGATGTTGTCGTATGTATTGCCA 58.491 39.130 0.00 0.00 0.00 4.92
951 2116 4.331443 TGATGTTGTCGTATGTATTGCCAC 59.669 41.667 0.00 0.00 0.00 5.01
952 2117 3.665190 TGTTGTCGTATGTATTGCCACA 58.335 40.909 0.00 0.00 0.00 4.17
959 2128 7.438564 TGTCGTATGTATTGCCACATATAGTT 58.561 34.615 6.28 0.00 41.97 2.24
994 2163 5.930135 TGTCAATTCTATTTCTAGGCTCCC 58.070 41.667 0.00 0.00 0.00 4.30
1022 2194 1.170290 GGCAGCAACACCCTTACGTT 61.170 55.000 0.00 0.00 0.00 3.99
1047 2219 4.654412 GAGATCCGGCGCTCGCAT 62.654 66.667 16.36 0.00 44.11 4.73
1211 2383 3.813529 CTGTAAGCAGAAGGGAAAACG 57.186 47.619 0.00 0.00 45.28 3.60
1249 2445 3.386768 AGTGCATATTAGCTACCCACG 57.613 47.619 0.00 0.00 34.99 4.94
1279 2480 4.709397 TGATGTGGTCCAAACTTGTTTCTT 59.291 37.500 0.00 0.00 0.00 2.52
1280 2481 5.888724 TGATGTGGTCCAAACTTGTTTCTTA 59.111 36.000 0.00 0.00 0.00 2.10
1281 2482 6.378564 TGATGTGGTCCAAACTTGTTTCTTAA 59.621 34.615 0.00 0.00 0.00 1.85
1282 2483 6.783708 TGTGGTCCAAACTTGTTTCTTAAT 57.216 33.333 0.00 0.00 0.00 1.40
1290 2491 9.638239 TCCAAACTTGTTTCTTAATTATGATGC 57.362 29.630 2.19 0.50 0.00 3.91
1326 2527 1.000506 TCAACGGAGAAGCGCTACTTT 59.999 47.619 12.05 0.00 39.29 2.66
1344 2545 0.541063 TTCACCACACGGAGGAGCTA 60.541 55.000 0.00 0.00 35.59 3.32
1347 2548 0.966370 ACCACACGGAGGAGCTACTC 60.966 60.000 18.48 18.48 36.76 2.59
1797 3004 2.278857 GTCATCGTCGGCGCTGAT 60.279 61.111 24.03 10.50 43.61 2.90
1869 3076 0.179084 CCACGATACCAGCAACCGAT 60.179 55.000 0.00 0.00 0.00 4.18
2079 3289 4.832608 GACCACATCGACGGGGCC 62.833 72.222 0.00 0.00 0.00 5.80
2398 3625 9.448438 ACAAGTACAATTGTAAGCATTCAGATA 57.552 29.630 19.63 0.00 41.53 1.98
2411 3638 6.878317 AGCATTCAGATAGTACAACTTGCTA 58.122 36.000 0.00 0.00 35.15 3.49
2413 3640 6.758886 GCATTCAGATAGTACAACTTGCTAGT 59.241 38.462 0.00 0.00 35.68 2.57
2414 3641 7.921214 GCATTCAGATAGTACAACTTGCTAGTA 59.079 37.037 0.00 0.00 33.17 1.82
2415 3642 9.973450 CATTCAGATAGTACAACTTGCTAGTAT 57.027 33.333 0.00 0.00 33.17 2.12
2432 3678 2.165641 AGTATTCATCGGAGTTGCGTCA 59.834 45.455 0.00 0.00 0.00 4.35
2437 3683 2.927477 TCATCGGAGTTGCGTCAAATAC 59.073 45.455 0.00 0.00 0.00 1.89
2511 3770 5.562890 GCGAAGGCTGACTAACTTTGAATTT 60.563 40.000 0.00 0.00 35.83 1.82
2512 3771 6.348213 GCGAAGGCTGACTAACTTTGAATTTA 60.348 38.462 0.00 0.00 35.83 1.40
2513 3772 7.015877 CGAAGGCTGACTAACTTTGAATTTAC 58.984 38.462 0.00 0.00 0.00 2.01
2514 3773 7.307751 CGAAGGCTGACTAACTTTGAATTTACA 60.308 37.037 0.00 0.00 0.00 2.41
2527 3786 5.798125 TGAATTTACAAAGCCATCAACCA 57.202 34.783 0.00 0.00 0.00 3.67
2533 3792 1.747355 CAAAGCCATCAACCAGCTAGG 59.253 52.381 0.00 0.00 45.67 3.02
2539 3798 4.105377 AGCCATCAACCAGCTAGGAATTAT 59.895 41.667 8.91 0.00 41.22 1.28
2544 3803 4.907875 TCAACCAGCTAGGAATTATAGCCT 59.092 41.667 15.25 4.04 45.53 4.58
2545 3804 5.369699 TCAACCAGCTAGGAATTATAGCCTT 59.630 40.000 15.25 5.53 45.53 4.35
2547 3806 4.021016 ACCAGCTAGGAATTATAGCCTTCG 60.021 45.833 15.25 6.33 45.53 3.79
2564 3823 3.556213 CCTTCGTTACATCTCCCAACACA 60.556 47.826 0.00 0.00 0.00 3.72
2589 3848 7.406799 ACACACAAAGAAAAGAAAACAACAG 57.593 32.000 0.00 0.00 0.00 3.16
2594 3853 4.695217 AGAAAAGAAAACAACAGCGACA 57.305 36.364 0.00 0.00 0.00 4.35
2596 3855 3.420839 AAAGAAAACAACAGCGACAGG 57.579 42.857 0.00 0.00 0.00 4.00
2603 3862 3.895232 ACAACAGCGACAGGAAGATAT 57.105 42.857 0.00 0.00 0.00 1.63
2605 3864 3.055819 ACAACAGCGACAGGAAGATATGT 60.056 43.478 0.00 0.00 0.00 2.29
2616 3875 0.694444 AAGATATGTGGGAGCCGGGT 60.694 55.000 5.45 5.45 0.00 5.28
2619 3878 0.399376 ATATGTGGGAGCCGGGTACA 60.399 55.000 19.57 14.37 0.00 2.90
2639 3898 1.202927 ACAGCTTACAGCACAACCCAT 60.203 47.619 0.00 0.00 45.56 4.00
2640 3899 1.200716 CAGCTTACAGCACAACCCATG 59.799 52.381 0.00 0.00 45.56 3.66
2700 3959 2.019156 GCATAGTGTGAAGCCCTTCCC 61.019 57.143 5.64 0.00 38.77 3.97
2701 3960 0.919710 ATAGTGTGAAGCCCTTCCCC 59.080 55.000 5.64 0.00 38.77 4.81
2702 3961 1.205460 TAGTGTGAAGCCCTTCCCCC 61.205 60.000 5.64 0.00 38.77 5.40
2703 3962 2.121506 TGTGAAGCCCTTCCCCCT 60.122 61.111 5.64 0.00 38.77 4.79
2704 3963 1.778383 TGTGAAGCCCTTCCCCCTT 60.778 57.895 5.64 0.00 38.77 3.95
2705 3964 1.000771 GTGAAGCCCTTCCCCCTTC 60.001 63.158 5.64 0.00 38.77 3.46
2706 3965 2.238701 TGAAGCCCTTCCCCCTTCC 61.239 63.158 5.64 0.00 38.77 3.46
2736 3995 2.607631 TGGACGGAAAAGAAGAACGT 57.392 45.000 0.00 0.00 40.85 3.99
2751 4010 1.679153 GAACGTCAAGGGAAAAGCCAA 59.321 47.619 0.00 0.00 38.95 4.52
2753 4012 1.318576 CGTCAAGGGAAAAGCCAACT 58.681 50.000 0.00 0.00 38.95 3.16
2766 4025 1.875963 CCAACTAACTTGGCAGCGG 59.124 57.895 0.00 0.00 43.37 5.52
2860 4120 1.544825 CCTTGTCCTGGCTCGAAGGA 61.545 60.000 0.00 0.00 41.66 3.36
2891 4157 3.801114 TCGAGATGTGTTCACCATAGG 57.199 47.619 0.37 0.00 0.00 2.57
2895 4161 2.168521 AGATGTGTTCACCATAGGACGG 59.831 50.000 0.37 0.00 0.00 4.79
2962 4228 1.964373 CGTAGCGGGCAAACCTTGT 60.964 57.895 0.00 0.00 36.97 3.16
2978 4244 1.129998 CTTGTCTGCCATGAAGAAGCG 59.870 52.381 0.00 0.00 0.00 4.68
2985 4251 1.377725 CATGAAGAAGCGCCCACCT 60.378 57.895 2.29 0.00 0.00 4.00
3036 4302 3.643763 CAGGTAGCGGTTCACAGATATC 58.356 50.000 0.00 0.00 0.00 1.63
3040 4306 3.085443 AGCGGTTCACAGATATCGAAG 57.915 47.619 0.00 0.00 0.00 3.79
3041 4307 2.688446 AGCGGTTCACAGATATCGAAGA 59.312 45.455 0.00 0.00 45.75 2.87
3042 4308 3.130516 AGCGGTTCACAGATATCGAAGAA 59.869 43.478 0.00 0.30 43.58 2.52
3043 4309 3.487574 GCGGTTCACAGATATCGAAGAAG 59.512 47.826 0.00 0.00 43.58 2.85
3044 4310 3.487574 CGGTTCACAGATATCGAAGAAGC 59.512 47.826 18.14 18.14 43.58 3.86
3045 4311 3.487574 GGTTCACAGATATCGAAGAAGCG 59.512 47.826 15.31 0.00 43.58 4.68
3046 4312 3.355626 TCACAGATATCGAAGAAGCGG 57.644 47.619 0.00 0.00 43.58 5.52
3047 4313 2.688446 TCACAGATATCGAAGAAGCGGT 59.312 45.455 0.00 0.00 43.58 5.68
3048 4314 2.791560 CACAGATATCGAAGAAGCGGTG 59.208 50.000 0.00 0.00 43.58 4.94
3049 4315 2.688446 ACAGATATCGAAGAAGCGGTGA 59.312 45.455 0.00 0.00 43.58 4.02
3050 4316 3.243234 ACAGATATCGAAGAAGCGGTGAG 60.243 47.826 0.00 0.00 43.58 3.51
3051 4317 2.055100 GATATCGAAGAAGCGGTGAGC 58.945 52.381 0.00 0.00 43.58 4.26
3067 4333 2.184322 GCTCGAGGCGGACATCAA 59.816 61.111 15.58 0.00 0.00 2.57
3068 4334 1.880340 GCTCGAGGCGGACATCAAG 60.880 63.158 15.58 0.00 0.00 3.02
3069 4335 1.880340 CTCGAGGCGGACATCAAGC 60.880 63.158 3.91 0.00 0.00 4.01
3070 4336 2.125552 CGAGGCGGACATCAAGCA 60.126 61.111 0.00 0.00 0.00 3.91
3071 4337 2.456119 CGAGGCGGACATCAAGCAC 61.456 63.158 0.00 0.00 0.00 4.40
3072 4338 1.375908 GAGGCGGACATCAAGCACA 60.376 57.895 0.00 0.00 0.00 4.57
3073 4339 1.639298 GAGGCGGACATCAAGCACAC 61.639 60.000 0.00 0.00 0.00 3.82
3074 4340 1.965930 GGCGGACATCAAGCACACA 60.966 57.895 0.00 0.00 0.00 3.72
3075 4341 1.514678 GGCGGACATCAAGCACACAA 61.515 55.000 0.00 0.00 0.00 3.33
3076 4342 0.310543 GCGGACATCAAGCACACAAA 59.689 50.000 0.00 0.00 0.00 2.83
3077 4343 1.068333 GCGGACATCAAGCACACAAAT 60.068 47.619 0.00 0.00 0.00 2.32
3078 4344 2.607771 GCGGACATCAAGCACACAAATT 60.608 45.455 0.00 0.00 0.00 1.82
3079 4345 3.365868 GCGGACATCAAGCACACAAATTA 60.366 43.478 0.00 0.00 0.00 1.40
3080 4346 4.793071 CGGACATCAAGCACACAAATTAA 58.207 39.130 0.00 0.00 0.00 1.40
3081 4347 4.853196 CGGACATCAAGCACACAAATTAAG 59.147 41.667 0.00 0.00 0.00 1.85
3082 4348 5.334802 CGGACATCAAGCACACAAATTAAGA 60.335 40.000 0.00 0.00 0.00 2.10
3083 4349 6.446318 GGACATCAAGCACACAAATTAAGAA 58.554 36.000 0.00 0.00 0.00 2.52
3084 4350 6.363357 GGACATCAAGCACACAAATTAAGAAC 59.637 38.462 0.00 0.00 0.00 3.01
3085 4351 5.914635 ACATCAAGCACACAAATTAAGAACG 59.085 36.000 0.00 0.00 0.00 3.95
3086 4352 4.286910 TCAAGCACACAAATTAAGAACGC 58.713 39.130 0.00 0.00 0.00 4.84
3087 4353 3.282831 AGCACACAAATTAAGAACGCC 57.717 42.857 0.00 0.00 0.00 5.68
3088 4354 2.621055 AGCACACAAATTAAGAACGCCA 59.379 40.909 0.00 0.00 0.00 5.69
3089 4355 3.067461 AGCACACAAATTAAGAACGCCAA 59.933 39.130 0.00 0.00 0.00 4.52
3090 4356 3.181575 GCACACAAATTAAGAACGCCAAC 59.818 43.478 0.00 0.00 0.00 3.77
3091 4357 4.355437 CACACAAATTAAGAACGCCAACA 58.645 39.130 0.00 0.00 0.00 3.33
3092 4358 4.800993 CACACAAATTAAGAACGCCAACAA 59.199 37.500 0.00 0.00 0.00 2.83
3093 4359 5.040635 ACACAAATTAAGAACGCCAACAAG 58.959 37.500 0.00 0.00 0.00 3.16
3094 4360 4.444056 CACAAATTAAGAACGCCAACAAGG 59.556 41.667 0.00 0.00 41.84 3.61
3095 4361 4.339814 ACAAATTAAGAACGCCAACAAGGA 59.660 37.500 0.00 0.00 41.22 3.36
3096 4362 5.163499 ACAAATTAAGAACGCCAACAAGGAA 60.163 36.000 0.00 0.00 41.22 3.36
3097 4363 4.766404 ATTAAGAACGCCAACAAGGAAG 57.234 40.909 0.00 0.00 41.22 3.46
3098 4364 2.341846 AAGAACGCCAACAAGGAAGA 57.658 45.000 0.00 0.00 41.22 2.87
3099 4365 2.341846 AGAACGCCAACAAGGAAGAA 57.658 45.000 0.00 0.00 41.22 2.52
3100 4366 2.222027 AGAACGCCAACAAGGAAGAAG 58.778 47.619 0.00 0.00 41.22 2.85
3101 4367 1.266989 GAACGCCAACAAGGAAGAAGG 59.733 52.381 0.00 0.00 41.22 3.46
3102 4368 0.472471 ACGCCAACAAGGAAGAAGGA 59.528 50.000 0.00 0.00 41.22 3.36
3103 4369 0.875059 CGCCAACAAGGAAGAAGGAC 59.125 55.000 0.00 0.00 41.22 3.85
3104 4370 1.248486 GCCAACAAGGAAGAAGGACC 58.752 55.000 0.00 0.00 41.22 4.46
3105 4371 1.478654 GCCAACAAGGAAGAAGGACCA 60.479 52.381 0.00 0.00 41.22 4.02
3106 4372 2.508526 CCAACAAGGAAGAAGGACCAG 58.491 52.381 0.00 0.00 41.22 4.00
3107 4373 2.508526 CAACAAGGAAGAAGGACCAGG 58.491 52.381 0.00 0.00 0.00 4.45
3108 4374 1.821088 ACAAGGAAGAAGGACCAGGT 58.179 50.000 0.00 0.00 0.00 4.00
3109 4375 2.986050 ACAAGGAAGAAGGACCAGGTA 58.014 47.619 0.00 0.00 0.00 3.08
3110 4376 3.323775 ACAAGGAAGAAGGACCAGGTAA 58.676 45.455 0.00 0.00 0.00 2.85
3111 4377 3.072622 ACAAGGAAGAAGGACCAGGTAAC 59.927 47.826 0.00 0.00 0.00 2.50
3124 4390 2.662150 GGTAACTCCATGTCGCGAC 58.338 57.895 31.66 31.66 35.97 5.19
3125 4391 1.138047 GGTAACTCCATGTCGCGACG 61.138 60.000 31.88 20.34 35.97 5.12
3126 4392 1.138036 TAACTCCATGTCGCGACGG 59.862 57.895 31.88 26.99 0.00 4.79
3127 4393 2.274232 TAACTCCATGTCGCGACGGG 62.274 60.000 32.28 32.28 0.00 5.28
3128 4394 3.822192 CTCCATGTCGCGACGGGA 61.822 66.667 35.39 35.39 36.43 5.14
3129 4395 4.124351 TCCATGTCGCGACGGGAC 62.124 66.667 34.88 31.32 44.15 4.46
3134 4400 2.659244 GTCGCGACGGGACAAACA 60.659 61.111 32.48 2.51 43.51 2.83
3135 4401 2.659244 TCGCGACGGGACAAACAC 60.659 61.111 3.71 0.00 0.00 3.32
3136 4402 3.708734 CGCGACGGGACAAACACC 61.709 66.667 0.00 0.00 0.00 4.16
3141 4407 2.111460 CGGGACAAACACCGGGAA 59.889 61.111 6.32 0.00 46.08 3.97
3142 4408 1.526455 CGGGACAAACACCGGGAAA 60.526 57.895 6.32 0.00 46.08 3.13
3143 4409 1.512156 CGGGACAAACACCGGGAAAG 61.512 60.000 6.32 0.00 46.08 2.62
3144 4410 1.176619 GGGACAAACACCGGGAAAGG 61.177 60.000 6.32 0.00 37.30 3.11
3145 4411 1.176619 GGACAAACACCGGGAAAGGG 61.177 60.000 6.32 0.00 35.02 3.95
3146 4412 0.179012 GACAAACACCGGGAAAGGGA 60.179 55.000 6.32 0.00 35.02 4.20
3147 4413 0.259356 ACAAACACCGGGAAAGGGAA 59.741 50.000 6.32 0.00 35.02 3.97
3148 4414 0.671796 CAAACACCGGGAAAGGGAAC 59.328 55.000 6.32 0.00 35.02 3.62
3162 4428 2.674754 GAACCCATTCCCCTCGCA 59.325 61.111 0.00 0.00 0.00 5.10
3163 4429 1.749258 GAACCCATTCCCCTCGCAC 60.749 63.158 0.00 0.00 0.00 5.34
3164 4430 3.282374 AACCCATTCCCCTCGCACC 62.282 63.158 0.00 0.00 0.00 5.01
3165 4431 4.506255 CCCATTCCCCTCGCACCC 62.506 72.222 0.00 0.00 0.00 4.61
3166 4432 3.727258 CCATTCCCCTCGCACCCA 61.727 66.667 0.00 0.00 0.00 4.51
3167 4433 2.124570 CATTCCCCTCGCACCCAG 60.125 66.667 0.00 0.00 0.00 4.45
3168 4434 3.411517 ATTCCCCTCGCACCCAGG 61.412 66.667 0.00 0.00 0.00 4.45
3169 4435 4.974438 TTCCCCTCGCACCCAGGT 62.974 66.667 0.00 0.00 0.00 4.00
3170 4436 4.974438 TCCCCTCGCACCCAGGTT 62.974 66.667 0.00 0.00 0.00 3.50
3171 4437 4.410400 CCCCTCGCACCCAGGTTC 62.410 72.222 0.00 0.00 0.00 3.62
3172 4438 4.760047 CCCTCGCACCCAGGTTCG 62.760 72.222 2.24 2.24 36.20 3.95
3173 4439 3.691342 CCTCGCACCCAGGTTCGA 61.691 66.667 11.02 11.02 40.93 3.71
3175 4441 3.691342 TCGCACCCAGGTTCGAGG 61.691 66.667 7.49 0.00 38.66 4.63
3180 4446 3.727387 CCCAGGTTCGAGGGTGAT 58.273 61.111 0.00 0.00 40.34 3.06
3181 4447 1.221840 CCCAGGTTCGAGGGTGATG 59.778 63.158 0.00 0.00 40.34 3.07
3182 4448 1.264749 CCCAGGTTCGAGGGTGATGA 61.265 60.000 0.00 0.00 40.34 2.92
3183 4449 0.613260 CCAGGTTCGAGGGTGATGAA 59.387 55.000 0.00 0.00 0.00 2.57
3184 4450 1.676014 CCAGGTTCGAGGGTGATGAAC 60.676 57.143 0.00 0.00 40.90 3.18
3193 4459 2.047655 GTGATGAACCACCGGCGA 60.048 61.111 9.30 0.00 0.00 5.54
3194 4460 1.669760 GTGATGAACCACCGGCGAA 60.670 57.895 9.30 0.00 0.00 4.70
3195 4461 1.024579 GTGATGAACCACCGGCGAAT 61.025 55.000 9.30 0.00 0.00 3.34
3196 4462 0.537653 TGATGAACCACCGGCGAATA 59.462 50.000 9.30 0.00 0.00 1.75
3197 4463 1.217882 GATGAACCACCGGCGAATAG 58.782 55.000 9.30 0.00 0.00 1.73
3198 4464 0.179056 ATGAACCACCGGCGAATAGG 60.179 55.000 9.30 6.91 0.00 2.57
3199 4465 1.219935 GAACCACCGGCGAATAGGT 59.780 57.895 9.30 7.64 42.34 3.08
3200 4466 0.808847 GAACCACCGGCGAATAGGTC 60.809 60.000 9.30 0.00 39.00 3.85
3201 4467 1.546589 AACCACCGGCGAATAGGTCA 61.547 55.000 9.30 0.00 39.00 4.02
3202 4468 1.227263 CCACCGGCGAATAGGTCAG 60.227 63.158 9.30 0.00 39.00 3.51
3203 4469 1.883084 CACCGGCGAATAGGTCAGC 60.883 63.158 9.30 0.00 39.00 4.26
3204 4470 2.658593 CCGGCGAATAGGTCAGCG 60.659 66.667 9.30 0.00 0.00 5.18
3205 4471 2.411701 CGGCGAATAGGTCAGCGA 59.588 61.111 0.00 0.00 0.00 4.93
3206 4472 1.007271 CGGCGAATAGGTCAGCGAT 60.007 57.895 0.00 0.00 0.00 4.58
3207 4473 0.597637 CGGCGAATAGGTCAGCGATT 60.598 55.000 0.00 0.00 0.00 3.34
3208 4474 1.335597 CGGCGAATAGGTCAGCGATTA 60.336 52.381 0.00 0.00 0.00 1.75
3209 4475 2.059541 GGCGAATAGGTCAGCGATTAC 58.940 52.381 0.00 0.00 0.00 1.89
3210 4476 2.059541 GCGAATAGGTCAGCGATTACC 58.940 52.381 0.00 0.00 35.91 2.85
3212 4478 3.566523 CGAATAGGTCAGCGATTACCTC 58.433 50.000 10.34 0.00 42.60 3.85
3213 4479 3.004419 CGAATAGGTCAGCGATTACCTCA 59.996 47.826 10.34 0.00 42.60 3.86
3214 4480 4.299978 GAATAGGTCAGCGATTACCTCAC 58.700 47.826 10.34 0.00 42.60 3.51
3215 4481 1.853963 AGGTCAGCGATTACCTCACT 58.146 50.000 0.00 0.00 42.60 3.41
3216 4482 3.014304 AGGTCAGCGATTACCTCACTA 57.986 47.619 0.00 0.00 42.60 2.74
3217 4483 2.952978 AGGTCAGCGATTACCTCACTAG 59.047 50.000 0.00 0.00 42.60 2.57
3218 4484 2.950309 GGTCAGCGATTACCTCACTAGA 59.050 50.000 0.00 0.00 32.72 2.43
3219 4485 3.570550 GGTCAGCGATTACCTCACTAGAT 59.429 47.826 0.00 0.00 32.72 1.98
3220 4486 4.760715 GGTCAGCGATTACCTCACTAGATA 59.239 45.833 0.00 0.00 32.72 1.98
3221 4487 5.416326 GGTCAGCGATTACCTCACTAGATAT 59.584 44.000 0.00 0.00 32.72 1.63
3222 4488 6.598457 GGTCAGCGATTACCTCACTAGATATA 59.402 42.308 0.00 0.00 32.72 0.86
3223 4489 7.201661 GGTCAGCGATTACCTCACTAGATATAG 60.202 44.444 0.00 0.00 32.72 1.31
3224 4490 6.316640 TCAGCGATTACCTCACTAGATATAGC 59.683 42.308 0.00 0.00 0.00 2.97
3225 4491 6.094186 CAGCGATTACCTCACTAGATATAGCA 59.906 42.308 0.00 0.00 0.00 3.49
3226 4492 6.831353 AGCGATTACCTCACTAGATATAGCAT 59.169 38.462 0.00 0.00 0.00 3.79
3227 4493 7.340743 AGCGATTACCTCACTAGATATAGCATT 59.659 37.037 0.00 0.00 0.00 3.56
3228 4494 7.646130 GCGATTACCTCACTAGATATAGCATTC 59.354 40.741 0.00 0.00 0.00 2.67
3229 4495 8.898761 CGATTACCTCACTAGATATAGCATTCT 58.101 37.037 0.00 0.00 0.00 2.40
3231 4497 9.760926 ATTACCTCACTAGATATAGCATTCTCA 57.239 33.333 0.00 0.00 0.00 3.27
3232 4498 7.701539 ACCTCACTAGATATAGCATTCTCAG 57.298 40.000 0.00 0.00 0.00 3.35
3233 4499 6.152661 ACCTCACTAGATATAGCATTCTCAGC 59.847 42.308 0.00 0.00 0.00 4.26
3234 4500 6.188400 TCACTAGATATAGCATTCTCAGCG 57.812 41.667 0.00 0.00 37.01 5.18
3235 4501 5.940470 TCACTAGATATAGCATTCTCAGCGA 59.060 40.000 0.00 0.00 37.01 4.93
3236 4502 6.601217 TCACTAGATATAGCATTCTCAGCGAT 59.399 38.462 0.00 0.00 37.01 4.58
3237 4503 7.770897 TCACTAGATATAGCATTCTCAGCGATA 59.229 37.037 0.00 0.00 34.80 2.92
3238 4504 7.855409 CACTAGATATAGCATTCTCAGCGATAC 59.145 40.741 0.00 0.00 33.48 2.24
3239 4505 6.765915 AGATATAGCATTCTCAGCGATACA 57.234 37.500 0.00 0.00 33.48 2.29
3240 4506 6.559810 AGATATAGCATTCTCAGCGATACAC 58.440 40.000 0.00 0.00 33.48 2.90
3241 4507 2.967599 AGCATTCTCAGCGATACACA 57.032 45.000 0.00 0.00 37.01 3.72
3242 4508 2.544685 AGCATTCTCAGCGATACACAC 58.455 47.619 0.00 0.00 37.01 3.82
3243 4509 2.094026 AGCATTCTCAGCGATACACACA 60.094 45.455 0.00 0.00 37.01 3.72
3244 4510 2.672874 GCATTCTCAGCGATACACACAA 59.327 45.455 0.00 0.00 0.00 3.33
3245 4511 3.125146 GCATTCTCAGCGATACACACAAA 59.875 43.478 0.00 0.00 0.00 2.83
3246 4512 4.641954 CATTCTCAGCGATACACACAAAC 58.358 43.478 0.00 0.00 0.00 2.93
3247 4513 3.660501 TCTCAGCGATACACACAAACT 57.339 42.857 0.00 0.00 0.00 2.66
3248 4514 4.776795 TCTCAGCGATACACACAAACTA 57.223 40.909 0.00 0.00 0.00 2.24
3249 4515 4.482386 TCTCAGCGATACACACAAACTAC 58.518 43.478 0.00 0.00 0.00 2.73
3250 4516 3.581755 TCAGCGATACACACAAACTACC 58.418 45.455 0.00 0.00 0.00 3.18
3251 4517 2.344441 CAGCGATACACACAAACTACCG 59.656 50.000 0.00 0.00 0.00 4.02
3252 4518 1.060122 GCGATACACACAAACTACCGC 59.940 52.381 0.00 0.00 0.00 5.68
3253 4519 2.602878 CGATACACACAAACTACCGCT 58.397 47.619 0.00 0.00 0.00 5.52
3254 4520 2.597305 CGATACACACAAACTACCGCTC 59.403 50.000 0.00 0.00 0.00 5.03
3255 4521 2.054687 TACACACAAACTACCGCTCG 57.945 50.000 0.00 0.00 0.00 5.03
3256 4522 0.386476 ACACACAAACTACCGCTCGA 59.614 50.000 0.00 0.00 0.00 4.04
3257 4523 1.202440 ACACACAAACTACCGCTCGAA 60.202 47.619 0.00 0.00 0.00 3.71
3258 4524 1.862201 CACACAAACTACCGCTCGAAA 59.138 47.619 0.00 0.00 0.00 3.46
3259 4525 2.478894 CACACAAACTACCGCTCGAAAT 59.521 45.455 0.00 0.00 0.00 2.17
3260 4526 2.735134 ACACAAACTACCGCTCGAAATC 59.265 45.455 0.00 0.00 0.00 2.17
3261 4527 2.993899 CACAAACTACCGCTCGAAATCT 59.006 45.455 0.00 0.00 0.00 2.40
3262 4528 2.993899 ACAAACTACCGCTCGAAATCTG 59.006 45.455 0.00 0.00 0.00 2.90
3263 4529 1.641577 AACTACCGCTCGAAATCTGC 58.358 50.000 0.00 0.00 0.00 4.26
3264 4530 0.530744 ACTACCGCTCGAAATCTGCA 59.469 50.000 0.00 0.00 0.00 4.41
3265 4531 1.067142 ACTACCGCTCGAAATCTGCAA 60.067 47.619 0.00 0.00 0.00 4.08
3266 4532 1.324736 CTACCGCTCGAAATCTGCAAC 59.675 52.381 0.00 0.00 0.00 4.17
3267 4533 0.602638 ACCGCTCGAAATCTGCAACA 60.603 50.000 0.00 0.00 0.00 3.33
3268 4534 0.516877 CCGCTCGAAATCTGCAACAA 59.483 50.000 0.00 0.00 0.00 2.83
3269 4535 1.595609 CGCTCGAAATCTGCAACAAC 58.404 50.000 0.00 0.00 0.00 3.32
3270 4536 1.725931 CGCTCGAAATCTGCAACAACC 60.726 52.381 0.00 0.00 0.00 3.77
3271 4537 1.266718 GCTCGAAATCTGCAACAACCA 59.733 47.619 0.00 0.00 0.00 3.67
3272 4538 2.918131 GCTCGAAATCTGCAACAACCAC 60.918 50.000 0.00 0.00 0.00 4.16
3273 4539 2.290367 CTCGAAATCTGCAACAACCACA 59.710 45.455 0.00 0.00 0.00 4.17
3274 4540 2.685388 TCGAAATCTGCAACAACCACAA 59.315 40.909 0.00 0.00 0.00 3.33
3275 4541 3.129462 TCGAAATCTGCAACAACCACAAA 59.871 39.130 0.00 0.00 0.00 2.83
3276 4542 3.862267 CGAAATCTGCAACAACCACAAAA 59.138 39.130 0.00 0.00 0.00 2.44
3277 4543 4.259770 CGAAATCTGCAACAACCACAAAAC 60.260 41.667 0.00 0.00 0.00 2.43
3278 4544 4.470334 AATCTGCAACAACCACAAAACT 57.530 36.364 0.00 0.00 0.00 2.66
3279 4545 5.590530 AATCTGCAACAACCACAAAACTA 57.409 34.783 0.00 0.00 0.00 2.24
3280 4546 5.590530 ATCTGCAACAACCACAAAACTAA 57.409 34.783 0.00 0.00 0.00 2.24
3281 4547 4.739195 TCTGCAACAACCACAAAACTAAC 58.261 39.130 0.00 0.00 0.00 2.34
3282 4548 3.851098 TGCAACAACCACAAAACTAACC 58.149 40.909 0.00 0.00 0.00 2.85
3283 4549 3.191669 GCAACAACCACAAAACTAACCC 58.808 45.455 0.00 0.00 0.00 4.11
3284 4550 3.787785 CAACAACCACAAAACTAACCCC 58.212 45.455 0.00 0.00 0.00 4.95
3285 4551 3.103080 ACAACCACAAAACTAACCCCA 57.897 42.857 0.00 0.00 0.00 4.96
3286 4552 3.648739 ACAACCACAAAACTAACCCCAT 58.351 40.909 0.00 0.00 0.00 4.00
3287 4553 3.386402 ACAACCACAAAACTAACCCCATG 59.614 43.478 0.00 0.00 0.00 3.66
3288 4554 2.604139 ACCACAAAACTAACCCCATGG 58.396 47.619 4.14 4.14 37.80 3.66
3289 4555 1.275010 CCACAAAACTAACCCCATGGC 59.725 52.381 6.09 0.00 33.59 4.40
3290 4556 1.967066 CACAAAACTAACCCCATGGCA 59.033 47.619 6.09 0.00 33.59 4.92
3291 4557 1.967779 ACAAAACTAACCCCATGGCAC 59.032 47.619 6.09 0.00 33.59 5.01
3292 4558 1.275010 CAAAACTAACCCCATGGCACC 59.725 52.381 6.09 0.00 33.59 5.01
3293 4559 0.485099 AAACTAACCCCATGGCACCA 59.515 50.000 6.09 0.00 33.59 4.17
3294 4560 0.251608 AACTAACCCCATGGCACCAC 60.252 55.000 6.09 0.00 33.59 4.16
3295 4561 1.382240 CTAACCCCATGGCACCACA 59.618 57.895 6.09 0.00 33.59 4.17
3296 4562 0.965363 CTAACCCCATGGCACCACAC 60.965 60.000 6.09 0.00 33.59 3.82
3297 4563 1.720077 TAACCCCATGGCACCACACA 61.720 55.000 6.09 0.00 33.59 3.72
3298 4564 2.990967 CCCCATGGCACCACACAC 60.991 66.667 6.09 0.00 0.00 3.82
3299 4565 2.990967 CCCATGGCACCACACACC 60.991 66.667 6.09 0.00 0.00 4.16
3300 4566 2.203466 CCATGGCACCACACACCA 60.203 61.111 0.00 0.00 37.99 4.17
3301 4567 2.270257 CCATGGCACCACACACCAG 61.270 63.158 0.00 0.00 36.78 4.00
3302 4568 2.598394 ATGGCACCACACACCAGC 60.598 61.111 0.00 0.00 36.78 4.85
3303 4569 4.892965 TGGCACCACACACCAGCC 62.893 66.667 0.00 0.00 45.41 4.85
3304 4570 4.586235 GGCACCACACACCAGCCT 62.586 66.667 0.00 0.00 42.01 4.58
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.400213 AGGCCAATCGACAGTTCCAA 59.600 50.000 5.01 0.00 0.00 3.53
2 3 0.250513 AGAGGCCAATCGACAGTTCC 59.749 55.000 5.01 0.00 0.00 3.62
3 4 2.961526 TAGAGGCCAATCGACAGTTC 57.038 50.000 5.01 0.00 0.00 3.01
4 5 2.501723 ACATAGAGGCCAATCGACAGTT 59.498 45.455 5.01 0.00 0.00 3.16
5 6 2.101582 GACATAGAGGCCAATCGACAGT 59.898 50.000 5.01 0.00 0.00 3.55
7 8 2.107366 TGACATAGAGGCCAATCGACA 58.893 47.619 5.01 0.00 0.00 4.35
8 9 2.101582 AGTGACATAGAGGCCAATCGAC 59.898 50.000 5.01 0.00 0.00 4.20
9 10 2.362397 GAGTGACATAGAGGCCAATCGA 59.638 50.000 5.01 0.00 0.00 3.59
10 11 2.546795 GGAGTGACATAGAGGCCAATCG 60.547 54.545 5.01 0.00 0.00 3.34
11 12 2.546795 CGGAGTGACATAGAGGCCAATC 60.547 54.545 5.01 0.00 0.00 2.67
12 13 1.414181 CGGAGTGACATAGAGGCCAAT 59.586 52.381 5.01 0.00 0.00 3.16
13 14 0.824109 CGGAGTGACATAGAGGCCAA 59.176 55.000 5.01 0.00 0.00 4.52
14 15 1.676678 GCGGAGTGACATAGAGGCCA 61.677 60.000 5.01 0.00 0.00 5.36
15 16 1.068250 GCGGAGTGACATAGAGGCC 59.932 63.158 0.00 0.00 0.00 5.19
16 17 1.068250 GGCGGAGTGACATAGAGGC 59.932 63.158 0.00 0.00 0.00 4.70
17 18 0.103208 GTGGCGGAGTGACATAGAGG 59.897 60.000 0.00 0.00 0.00 3.69
18 19 0.103208 GGTGGCGGAGTGACATAGAG 59.897 60.000 0.00 0.00 0.00 2.43
19 20 0.613572 TGGTGGCGGAGTGACATAGA 60.614 55.000 0.00 0.00 0.00 1.98
20 21 0.179100 CTGGTGGCGGAGTGACATAG 60.179 60.000 0.00 0.00 0.00 2.23
21 22 0.902984 ACTGGTGGCGGAGTGACATA 60.903 55.000 0.00 0.00 0.00 2.29
22 23 2.217038 ACTGGTGGCGGAGTGACAT 61.217 57.895 0.00 0.00 0.00 3.06
23 24 2.842462 ACTGGTGGCGGAGTGACA 60.842 61.111 0.00 0.00 0.00 3.58
24 25 2.357517 CACTGGTGGCGGAGTGAC 60.358 66.667 4.78 0.00 41.90 3.67
25 26 2.842462 ACACTGGTGGCGGAGTGA 60.842 61.111 14.94 0.00 41.90 3.41
26 27 2.357517 GACACTGGTGGCGGAGTG 60.358 66.667 5.70 8.36 44.38 3.51
27 28 1.696097 AAAGACACTGGTGGCGGAGT 61.696 55.000 5.70 0.00 45.19 3.85
28 29 0.951040 GAAAGACACTGGTGGCGGAG 60.951 60.000 5.70 0.00 45.19 4.63
29 30 1.070786 GAAAGACACTGGTGGCGGA 59.929 57.895 5.70 0.00 45.19 5.54
30 31 0.535102 AAGAAAGACACTGGTGGCGG 60.535 55.000 5.70 0.00 45.19 6.13
31 32 1.002468 CAAAGAAAGACACTGGTGGCG 60.002 52.381 5.70 0.00 45.19 5.69
32 33 2.297701 TCAAAGAAAGACACTGGTGGC 58.702 47.619 5.70 1.77 39.43 5.01
33 34 3.694072 TGTTCAAAGAAAGACACTGGTGG 59.306 43.478 5.70 0.00 34.19 4.61
34 35 4.396166 ACTGTTCAAAGAAAGACACTGGTG 59.604 41.667 0.00 0.00 0.00 4.17
35 36 4.396166 CACTGTTCAAAGAAAGACACTGGT 59.604 41.667 0.00 0.00 0.00 4.00
39 40 3.378427 AGGCACTGTTCAAAGAAAGACAC 59.622 43.478 0.00 0.00 37.18 3.67
62 63 2.046314 GTGGTGGTGGATGGGTCG 60.046 66.667 0.00 0.00 0.00 4.79
76 77 0.817634 TTGTGGACGCTTCAAGGTGG 60.818 55.000 0.00 0.00 0.00 4.61
103 104 1.090052 GCAGGTCGTGGTAGGCATTC 61.090 60.000 0.00 0.00 0.00 2.67
133 134 1.475751 CGCTTGTGGAATCCATAGCCT 60.476 52.381 24.16 0.00 39.34 4.58
136 137 1.860950 CGACGCTTGTGGAATCCATAG 59.139 52.381 4.81 7.61 35.28 2.23
143 144 1.954146 GTCAGCGACGCTTGTGGAA 60.954 57.895 21.97 0.00 36.40 3.53
146 147 3.767230 CGGTCAGCGACGCTTGTG 61.767 66.667 21.97 10.66 36.40 3.33
155 156 4.337060 TGACACGACCGGTCAGCG 62.337 66.667 32.80 22.60 40.16 5.18
172 173 3.290710 GGCACATCATCCATTAGGTTGT 58.709 45.455 0.00 0.00 36.26 3.32
197 198 1.214589 CGGGAATATACCTCCGCCG 59.785 63.158 0.00 0.00 35.95 6.46
218 219 2.492025 ACAAATGGCATAGAGGGGAGA 58.508 47.619 0.00 0.00 0.00 3.71
240 241 4.431416 ACTGAAACCTTACCACATCACA 57.569 40.909 0.00 0.00 0.00 3.58
242 243 4.348461 TGGTACTGAAACCTTACCACATCA 59.652 41.667 0.00 0.00 40.30 3.07
244 245 4.986054 TGGTACTGAAACCTTACCACAT 57.014 40.909 0.00 0.00 40.30 3.21
245 246 4.409574 TCTTGGTACTGAAACCTTACCACA 59.590 41.667 0.00 0.00 43.97 4.17
246 247 4.753610 GTCTTGGTACTGAAACCTTACCAC 59.246 45.833 0.00 0.00 43.97 4.16
247 248 4.657039 AGTCTTGGTACTGAAACCTTACCA 59.343 41.667 0.00 0.00 42.86 3.25
250 251 7.786046 TGATAGTCTTGGTACTGAAACCTTA 57.214 36.000 0.00 0.00 40.44 2.69
251 252 6.681729 TGATAGTCTTGGTACTGAAACCTT 57.318 37.500 0.00 0.00 40.44 3.50
252 253 6.213600 ACATGATAGTCTTGGTACTGAAACCT 59.786 38.462 0.00 0.00 40.44 3.50
254 255 6.183360 GCACATGATAGTCTTGGTACTGAAAC 60.183 42.308 0.00 0.00 0.00 2.78
255 256 5.874810 GCACATGATAGTCTTGGTACTGAAA 59.125 40.000 0.00 0.00 0.00 2.69
256 257 5.187772 AGCACATGATAGTCTTGGTACTGAA 59.812 40.000 0.00 0.00 0.00 3.02
257 258 4.711846 AGCACATGATAGTCTTGGTACTGA 59.288 41.667 0.00 0.00 0.00 3.41
258 259 5.016051 AGCACATGATAGTCTTGGTACTG 57.984 43.478 0.00 0.00 0.00 2.74
259 260 5.894393 ACTAGCACATGATAGTCTTGGTACT 59.106 40.000 3.99 0.00 42.95 2.73
279 280 5.390387 AGGGAAGATTAGCTAGTGGACTAG 58.610 45.833 9.16 9.16 46.63 2.57
280 281 5.405063 AGGGAAGATTAGCTAGTGGACTA 57.595 43.478 0.00 0.00 0.00 2.59
281 282 4.273300 AGGGAAGATTAGCTAGTGGACT 57.727 45.455 0.00 0.00 0.00 3.85
283 284 5.076598 AGGATAGGGAAGATTAGCTAGTGGA 59.923 44.000 0.00 0.00 0.00 4.02
284 285 5.337788 AGGATAGGGAAGATTAGCTAGTGG 58.662 45.833 0.00 0.00 0.00 4.00
285 286 6.152661 CAGAGGATAGGGAAGATTAGCTAGTG 59.847 46.154 0.00 0.00 0.00 2.74
286 287 6.252995 CAGAGGATAGGGAAGATTAGCTAGT 58.747 44.000 0.00 0.00 0.00 2.57
287 288 5.656416 CCAGAGGATAGGGAAGATTAGCTAG 59.344 48.000 0.00 0.00 0.00 3.42
288 289 5.584913 CCAGAGGATAGGGAAGATTAGCTA 58.415 45.833 0.00 0.00 0.00 3.32
289 290 4.424842 CCAGAGGATAGGGAAGATTAGCT 58.575 47.826 0.00 0.00 0.00 3.32
290 291 3.055458 GCCAGAGGATAGGGAAGATTAGC 60.055 52.174 0.00 0.00 0.00 3.09
293 430 2.343625 GGCCAGAGGATAGGGAAGATT 58.656 52.381 0.00 0.00 0.00 2.40
298 435 0.251832 GATCGGCCAGAGGATAGGGA 60.252 60.000 2.24 0.00 0.00 4.20
300 437 2.516227 TAGATCGGCCAGAGGATAGG 57.484 55.000 2.24 0.00 0.00 2.57
302 439 2.103373 GCATAGATCGGCCAGAGGATA 58.897 52.381 2.24 0.00 0.00 2.59
303 440 0.901124 GCATAGATCGGCCAGAGGAT 59.099 55.000 2.24 0.00 0.00 3.24
308 445 3.455327 CATAGATGCATAGATCGGCCAG 58.545 50.000 2.24 0.00 0.00 4.85
309 446 3.531934 CATAGATGCATAGATCGGCCA 57.468 47.619 2.24 0.00 0.00 5.36
322 459 2.306805 TGGATTGGCTAGGGCATAGATG 59.693 50.000 10.88 0.00 38.08 2.90
323 460 2.636005 TGGATTGGCTAGGGCATAGAT 58.364 47.619 10.88 0.00 38.08 1.98
324 461 2.116869 TGGATTGGCTAGGGCATAGA 57.883 50.000 10.88 0.00 38.08 1.98
325 462 3.264193 TGTATGGATTGGCTAGGGCATAG 59.736 47.826 0.96 0.96 38.08 2.23
326 463 3.255831 TGTATGGATTGGCTAGGGCATA 58.744 45.455 0.00 0.00 38.08 3.14
327 464 2.065007 TGTATGGATTGGCTAGGGCAT 58.935 47.619 0.00 0.00 38.08 4.40
330 467 3.795688 ACATGTATGGATTGGCTAGGG 57.204 47.619 0.00 0.00 0.00 3.53
332 469 7.448161 TGGAAATTACATGTATGGATTGGCTAG 59.552 37.037 6.36 0.00 0.00 3.42
336 473 9.480053 GAAATGGAAATTACATGTATGGATTGG 57.520 33.333 6.36 0.00 0.00 3.16
425 1577 6.258507 GTGTTTGGCAAGAGAAACATCATTTT 59.741 34.615 0.00 0.00 42.43 1.82
450 1609 7.964604 ACATCATATTCATCATCACACTCAG 57.035 36.000 0.00 0.00 0.00 3.35
538 1698 3.387699 CCCACCATTTTCTCAAAACCACT 59.612 43.478 0.00 0.00 32.37 4.00
540 1700 2.103941 GCCCACCATTTTCTCAAAACCA 59.896 45.455 0.00 0.00 32.37 3.67
556 1716 1.799544 CAAGGAATTGCTTTGCCCAC 58.200 50.000 9.80 0.00 0.00 4.61
574 1734 0.249953 TACTTCTGAAAACCGCCGCA 60.250 50.000 0.00 0.00 0.00 5.69
576 1736 1.136057 GCTTACTTCTGAAAACCGCCG 60.136 52.381 0.00 0.00 0.00 6.46
580 1740 4.454504 TGAATCGGCTTACTTCTGAAAACC 59.545 41.667 0.00 0.00 0.00 3.27
591 1751 7.254852 TGGTTATTTCATTTGAATCGGCTTAC 58.745 34.615 0.00 0.00 33.54 2.34
593 1753 6.279513 TGGTTATTTCATTTGAATCGGCTT 57.720 33.333 0.00 0.00 33.54 4.35
595 1755 6.099341 AGTTGGTTATTTCATTTGAATCGGC 58.901 36.000 0.00 0.00 33.54 5.54
598 1758 9.487790 TTCCAAGTTGGTTATTTCATTTGAATC 57.512 29.630 21.35 0.00 39.03 2.52
600 1760 9.672673 TTTTCCAAGTTGGTTATTTCATTTGAA 57.327 25.926 21.35 0.94 39.03 2.69
680 1841 5.601313 AGTATTTATAAGGCCGGTTCAGAGA 59.399 40.000 1.90 0.00 0.00 3.10
721 1882 6.716934 TTGCTCTACGAGATAGGAAAGATT 57.283 37.500 0.00 0.00 0.00 2.40
722 1883 6.096987 TGTTTGCTCTACGAGATAGGAAAGAT 59.903 38.462 0.00 0.00 32.26 2.40
839 2004 4.848757 AGTAAGACAAAAGCTTCTTTGCG 58.151 39.130 10.19 0.00 39.46 4.85
946 2111 6.212187 AGAGAGCATATGAACTATATGTGGCA 59.788 38.462 6.97 0.00 46.81 4.92
947 2112 6.534436 CAGAGAGCATATGAACTATATGTGGC 59.466 42.308 6.97 0.00 46.81 5.01
948 2113 7.609960 ACAGAGAGCATATGAACTATATGTGG 58.390 38.462 6.97 0.00 46.81 4.17
949 2114 8.302438 TGACAGAGAGCATATGAACTATATGTG 58.698 37.037 6.97 0.00 46.81 3.21
950 2115 8.414629 TGACAGAGAGCATATGAACTATATGT 57.585 34.615 6.97 5.96 46.81 2.29
959 2128 9.486497 GAAATAGAATTGACAGAGAGCATATGA 57.514 33.333 6.97 0.00 0.00 2.15
971 2140 5.428457 TGGGAGCCTAGAAATAGAATTGACA 59.572 40.000 0.00 0.00 0.00 3.58
972 2141 5.930135 TGGGAGCCTAGAAATAGAATTGAC 58.070 41.667 0.00 0.00 0.00 3.18
1022 2194 2.106938 GCCGGATCTCGTGCATCA 59.893 61.111 5.05 0.00 35.90 3.07
1111 2283 0.842635 TAGTCCGGGTACTCCTCCTC 59.157 60.000 0.00 0.00 0.00 3.71
1143 2315 0.550914 TGAGGTGTTGGCTCTTGGTT 59.449 50.000 0.00 0.00 0.00 3.67
1249 2445 4.000988 AGTTTGGACCACATCATCGTTAC 58.999 43.478 0.00 0.00 0.00 2.50
1326 2527 1.076014 TAGCTCCTCCGTGTGGTGA 59.924 57.895 0.00 0.00 36.30 4.02
1347 2548 4.770874 AATTCGGGGTGGGCGTCG 62.771 66.667 0.00 0.00 0.00 5.12
1958 3165 2.430921 CGTCCGTGAGACACTGCC 60.431 66.667 0.00 0.00 46.69 4.85
2113 3323 0.328592 TACTCTCTCAGCACGGTCCT 59.671 55.000 0.00 0.00 0.00 3.85
2279 3495 2.178273 CGTCGTGCAGGTCGATGA 59.822 61.111 18.81 0.00 44.02 2.92
2398 3625 6.096423 TCCGATGAATACTAGCAAGTTGTACT 59.904 38.462 4.48 0.00 37.15 2.73
2411 3638 2.165641 TGACGCAACTCCGATGAATACT 59.834 45.455 0.00 0.00 0.00 2.12
2413 3640 2.951457 TGACGCAACTCCGATGAATA 57.049 45.000 0.00 0.00 0.00 1.75
2414 3641 2.093306 TTGACGCAACTCCGATGAAT 57.907 45.000 0.00 0.00 0.00 2.57
2415 3642 1.872388 TTTGACGCAACTCCGATGAA 58.128 45.000 0.00 0.00 0.00 2.57
2420 3666 3.806316 AAAGTATTTGACGCAACTCCG 57.194 42.857 0.00 0.00 36.60 4.63
2437 3683 6.708285 ACCATAACCTTGTACTCCTACAAAG 58.292 40.000 0.00 0.00 41.40 2.77
2484 3735 3.955650 AAGTTAGTCAGCCTTCGCTTA 57.044 42.857 0.00 0.00 45.55 3.09
2485 3736 2.808543 CAAAGTTAGTCAGCCTTCGCTT 59.191 45.455 0.00 0.00 45.55 4.68
2511 3770 2.584835 AGCTGGTTGATGGCTTTGTA 57.415 45.000 0.00 0.00 31.81 2.41
2512 3771 2.440409 CTAGCTGGTTGATGGCTTTGT 58.560 47.619 0.00 0.00 37.50 2.83
2513 3772 1.747355 CCTAGCTGGTTGATGGCTTTG 59.253 52.381 0.00 0.00 37.50 2.77
2514 3773 1.635487 TCCTAGCTGGTTGATGGCTTT 59.365 47.619 0.00 0.00 37.50 3.51
2527 3786 5.810080 AACGAAGGCTATAATTCCTAGCT 57.190 39.130 15.66 0.00 41.11 3.32
2533 3792 6.590677 GGGAGATGTAACGAAGGCTATAATTC 59.409 42.308 0.00 0.00 0.00 2.17
2539 3798 2.742348 TGGGAGATGTAACGAAGGCTA 58.258 47.619 0.00 0.00 0.00 3.93
2544 3803 3.755112 TGTGTTGGGAGATGTAACGAA 57.245 42.857 0.00 0.00 0.00 3.85
2545 3804 3.181464 TGTTGTGTTGGGAGATGTAACGA 60.181 43.478 0.00 0.00 0.00 3.85
2547 3806 3.880490 TGTGTTGTGTTGGGAGATGTAAC 59.120 43.478 0.00 0.00 0.00 2.50
2564 3823 7.518211 GCTGTTGTTTTCTTTTCTTTGTGTGTT 60.518 33.333 0.00 0.00 0.00 3.32
2589 3848 1.412710 TCCCACATATCTTCCTGTCGC 59.587 52.381 0.00 0.00 0.00 5.19
2594 3853 1.051812 CGGCTCCCACATATCTTCCT 58.948 55.000 0.00 0.00 0.00 3.36
2596 3855 0.035458 CCCGGCTCCCACATATCTTC 59.965 60.000 0.00 0.00 0.00 2.87
2603 3862 3.315949 GTGTACCCGGCTCCCACA 61.316 66.667 0.00 0.00 0.00 4.17
2605 3864 3.000819 CTGTGTACCCGGCTCCCA 61.001 66.667 0.00 0.00 0.00 4.37
2639 3898 7.561021 TCTTCATGTTTAGTTGTTTGTAGCA 57.439 32.000 0.00 0.00 0.00 3.49
2640 3899 8.850454 TTTCTTCATGTTTAGTTGTTTGTAGC 57.150 30.769 0.00 0.00 0.00 3.58
2647 3906 7.148086 TGCTTCACTTTCTTCATGTTTAGTTGT 60.148 33.333 0.00 0.00 0.00 3.32
2688 3947 2.238701 GGAAGGGGGAAGGGCTTCA 61.239 63.158 0.00 0.00 41.20 3.02
2700 3959 0.323725 CCATGTGGGACTTGGAAGGG 60.324 60.000 3.13 0.00 43.79 3.95
2701 3960 0.698238 TCCATGTGGGACTTGGAAGG 59.302 55.000 8.49 0.00 45.76 3.46
2722 3981 3.473625 TCCCTTGACGTTCTTCTTTTCC 58.526 45.455 0.00 0.00 0.00 3.13
2736 3995 4.178956 AGTTAGTTGGCTTTTCCCTTGA 57.821 40.909 0.00 0.00 0.00 3.02
2751 4010 0.037232 GAGTCCGCTGCCAAGTTAGT 60.037 55.000 0.00 0.00 0.00 2.24
2753 4012 0.320421 GTGAGTCCGCTGCCAAGTTA 60.320 55.000 0.00 0.00 0.00 2.24
2833 4093 1.852626 CCAGGACAAGGGGGAAGGT 60.853 63.158 0.00 0.00 0.00 3.50
2860 4120 1.153568 CATCTCGATGGTGTGGCGT 60.154 57.895 0.00 0.00 35.24 5.68
2865 4125 2.612972 GGTGAACACATCTCGATGGTGT 60.613 50.000 11.25 10.10 42.91 4.16
2891 4157 1.535462 CAAGACCACACATTTCCCGTC 59.465 52.381 0.00 0.00 0.00 4.79
2895 4161 3.882888 TGAACTCAAGACCACACATTTCC 59.117 43.478 0.00 0.00 0.00 3.13
2962 4228 1.746615 GGCGCTTCTTCATGGCAGA 60.747 57.895 7.64 0.00 0.00 4.26
2978 4244 1.912763 TTTTGGGCATCAGGTGGGC 60.913 57.895 0.00 0.00 0.00 5.36
2985 4251 1.969923 CCTTTCCTGTTTTGGGCATCA 59.030 47.619 0.00 0.00 0.00 3.07
2993 4259 3.572642 CAGGTTACCCCTTTCCTGTTTT 58.427 45.455 0.00 0.00 42.73 2.43
3019 4285 3.881089 TCTTCGATATCTGTGAACCGCTA 59.119 43.478 0.34 0.00 0.00 4.26
3045 4311 4.500116 GTCCGCCTCGAGCTCACC 62.500 72.222 15.40 0.00 40.39 4.02
3046 4312 2.945398 GATGTCCGCCTCGAGCTCAC 62.945 65.000 15.40 2.69 40.39 3.51
3047 4313 2.755876 ATGTCCGCCTCGAGCTCA 60.756 61.111 15.40 0.00 40.39 4.26
3048 4314 2.026879 GATGTCCGCCTCGAGCTC 59.973 66.667 6.99 2.73 40.39 4.09
3049 4315 2.290122 CTTGATGTCCGCCTCGAGCT 62.290 60.000 6.99 0.00 40.39 4.09
3050 4316 1.880340 CTTGATGTCCGCCTCGAGC 60.880 63.158 6.99 1.53 38.52 5.03
3051 4317 1.880340 GCTTGATGTCCGCCTCGAG 60.880 63.158 5.13 5.13 0.00 4.04
3052 4318 2.184322 GCTTGATGTCCGCCTCGA 59.816 61.111 0.00 0.00 0.00 4.04
3053 4319 2.125552 TGCTTGATGTCCGCCTCG 60.126 61.111 0.00 0.00 0.00 4.63
3054 4320 1.375908 TGTGCTTGATGTCCGCCTC 60.376 57.895 0.00 0.00 0.00 4.70
3055 4321 1.672356 GTGTGCTTGATGTCCGCCT 60.672 57.895 0.00 0.00 0.00 5.52
3056 4322 1.514678 TTGTGTGCTTGATGTCCGCC 61.515 55.000 0.00 0.00 0.00 6.13
3057 4323 0.310543 TTTGTGTGCTTGATGTCCGC 59.689 50.000 0.00 0.00 0.00 5.54
3058 4324 2.995466 ATTTGTGTGCTTGATGTCCG 57.005 45.000 0.00 0.00 0.00 4.79
3059 4325 6.012658 TCTTAATTTGTGTGCTTGATGTCC 57.987 37.500 0.00 0.00 0.00 4.02
3060 4326 6.086765 CGTTCTTAATTTGTGTGCTTGATGTC 59.913 38.462 0.00 0.00 0.00 3.06
3061 4327 5.914635 CGTTCTTAATTTGTGTGCTTGATGT 59.085 36.000 0.00 0.00 0.00 3.06
3062 4328 5.164158 GCGTTCTTAATTTGTGTGCTTGATG 60.164 40.000 0.00 0.00 0.00 3.07
3063 4329 4.917415 GCGTTCTTAATTTGTGTGCTTGAT 59.083 37.500 0.00 0.00 0.00 2.57
3064 4330 4.286910 GCGTTCTTAATTTGTGTGCTTGA 58.713 39.130 0.00 0.00 0.00 3.02
3065 4331 3.425193 GGCGTTCTTAATTTGTGTGCTTG 59.575 43.478 0.00 0.00 0.00 4.01
3066 4332 3.067461 TGGCGTTCTTAATTTGTGTGCTT 59.933 39.130 0.00 0.00 0.00 3.91
3067 4333 2.621055 TGGCGTTCTTAATTTGTGTGCT 59.379 40.909 0.00 0.00 0.00 4.40
3068 4334 3.006659 TGGCGTTCTTAATTTGTGTGC 57.993 42.857 0.00 0.00 0.00 4.57
3069 4335 4.355437 TGTTGGCGTTCTTAATTTGTGTG 58.645 39.130 0.00 0.00 0.00 3.82
3070 4336 4.640789 TGTTGGCGTTCTTAATTTGTGT 57.359 36.364 0.00 0.00 0.00 3.72
3071 4337 4.444056 CCTTGTTGGCGTTCTTAATTTGTG 59.556 41.667 0.00 0.00 0.00 3.33
3072 4338 4.339814 TCCTTGTTGGCGTTCTTAATTTGT 59.660 37.500 0.00 0.00 35.26 2.83
3073 4339 4.865776 TCCTTGTTGGCGTTCTTAATTTG 58.134 39.130 0.00 0.00 35.26 2.32
3074 4340 5.300792 TCTTCCTTGTTGGCGTTCTTAATTT 59.699 36.000 0.00 0.00 35.26 1.82
3075 4341 4.825085 TCTTCCTTGTTGGCGTTCTTAATT 59.175 37.500 0.00 0.00 35.26 1.40
3076 4342 4.394729 TCTTCCTTGTTGGCGTTCTTAAT 58.605 39.130 0.00 0.00 35.26 1.40
3077 4343 3.811083 TCTTCCTTGTTGGCGTTCTTAA 58.189 40.909 0.00 0.00 35.26 1.85
3078 4344 3.478857 TCTTCCTTGTTGGCGTTCTTA 57.521 42.857 0.00 0.00 35.26 2.10
3079 4345 2.341846 TCTTCCTTGTTGGCGTTCTT 57.658 45.000 0.00 0.00 35.26 2.52
3080 4346 2.222027 CTTCTTCCTTGTTGGCGTTCT 58.778 47.619 0.00 0.00 35.26 3.01
3081 4347 1.266989 CCTTCTTCCTTGTTGGCGTTC 59.733 52.381 0.00 0.00 35.26 3.95
3082 4348 1.133915 TCCTTCTTCCTTGTTGGCGTT 60.134 47.619 0.00 0.00 35.26 4.84
3083 4349 0.472471 TCCTTCTTCCTTGTTGGCGT 59.528 50.000 0.00 0.00 35.26 5.68
3084 4350 0.875059 GTCCTTCTTCCTTGTTGGCG 59.125 55.000 0.00 0.00 35.26 5.69
3085 4351 1.248486 GGTCCTTCTTCCTTGTTGGC 58.752 55.000 0.00 0.00 35.26 4.52
3086 4352 2.508526 CTGGTCCTTCTTCCTTGTTGG 58.491 52.381 0.00 0.00 37.10 3.77
3087 4353 2.158608 ACCTGGTCCTTCTTCCTTGTTG 60.159 50.000 0.00 0.00 0.00 3.33
3088 4354 2.136026 ACCTGGTCCTTCTTCCTTGTT 58.864 47.619 0.00 0.00 0.00 2.83
3089 4355 1.821088 ACCTGGTCCTTCTTCCTTGT 58.179 50.000 0.00 0.00 0.00 3.16
3090 4356 3.328050 AGTTACCTGGTCCTTCTTCCTTG 59.672 47.826 0.63 0.00 0.00 3.61
3091 4357 3.583526 GAGTTACCTGGTCCTTCTTCCTT 59.416 47.826 0.63 0.00 0.00 3.36
3092 4358 3.174779 GAGTTACCTGGTCCTTCTTCCT 58.825 50.000 0.63 0.00 0.00 3.36
3093 4359 2.236644 GGAGTTACCTGGTCCTTCTTCC 59.763 54.545 0.63 0.00 35.41 3.46
3094 4360 2.904434 TGGAGTTACCTGGTCCTTCTTC 59.096 50.000 0.63 0.00 39.86 2.87
3095 4361 2.986050 TGGAGTTACCTGGTCCTTCTT 58.014 47.619 0.63 0.00 39.86 2.52
3096 4362 2.715763 TGGAGTTACCTGGTCCTTCT 57.284 50.000 0.63 0.00 39.86 2.85
3097 4363 2.572104 ACATGGAGTTACCTGGTCCTTC 59.428 50.000 0.63 0.00 39.86 3.46
3098 4364 2.572104 GACATGGAGTTACCTGGTCCTT 59.428 50.000 0.63 0.00 39.86 3.36
3099 4365 2.188817 GACATGGAGTTACCTGGTCCT 58.811 52.381 0.63 0.00 39.86 3.85
3100 4366 1.134788 CGACATGGAGTTACCTGGTCC 60.135 57.143 0.63 0.00 38.34 4.46
3101 4367 1.739371 GCGACATGGAGTTACCTGGTC 60.739 57.143 0.63 0.00 39.86 4.02
3102 4368 0.249398 GCGACATGGAGTTACCTGGT 59.751 55.000 4.05 4.05 39.86 4.00
3103 4369 0.806102 CGCGACATGGAGTTACCTGG 60.806 60.000 0.00 0.00 39.86 4.45
3104 4370 0.172578 TCGCGACATGGAGTTACCTG 59.827 55.000 3.71 0.00 39.86 4.00
3105 4371 0.172803 GTCGCGACATGGAGTTACCT 59.827 55.000 33.09 0.00 39.86 3.08
3106 4372 1.138047 CGTCGCGACATGGAGTTACC 61.138 60.000 35.71 7.45 39.54 2.85
3107 4373 1.138047 CCGTCGCGACATGGAGTTAC 61.138 60.000 35.71 8.59 0.00 2.50
3108 4374 1.138036 CCGTCGCGACATGGAGTTA 59.862 57.895 35.71 0.00 0.00 2.24
3109 4375 2.126071 CCGTCGCGACATGGAGTT 60.126 61.111 35.71 0.00 0.00 3.01
3110 4376 4.129737 CCCGTCGCGACATGGAGT 62.130 66.667 35.71 0.00 0.00 3.85
3111 4377 3.822192 TCCCGTCGCGACATGGAG 61.822 66.667 35.71 22.26 31.01 3.86
3112 4378 4.124351 GTCCCGTCGCGACATGGA 62.124 66.667 35.71 33.77 31.79 3.41
3113 4379 3.925362 TTGTCCCGTCGCGACATGG 62.925 63.158 35.71 32.28 39.86 3.66
3114 4380 2.024868 TTTGTCCCGTCGCGACATG 61.025 57.895 35.71 25.79 39.86 3.21
3115 4381 2.025418 GTTTGTCCCGTCGCGACAT 61.025 57.895 35.71 0.00 39.86 3.06
3116 4382 2.659244 GTTTGTCCCGTCGCGACA 60.659 61.111 35.71 16.70 38.46 4.35
3117 4383 2.659244 TGTTTGTCCCGTCGCGAC 60.659 61.111 28.96 28.96 0.00 5.19
3118 4384 2.659244 GTGTTTGTCCCGTCGCGA 60.659 61.111 3.71 3.71 0.00 5.87
3119 4385 3.708734 GGTGTTTGTCCCGTCGCG 61.709 66.667 0.00 0.00 0.00 5.87
3120 4386 3.708734 CGGTGTTTGTCCCGTCGC 61.709 66.667 0.00 0.00 39.38 5.19
3121 4387 3.039588 CCGGTGTTTGTCCCGTCG 61.040 66.667 0.00 0.00 42.67 5.12
3122 4388 2.663423 TTCCCGGTGTTTGTCCCGTC 62.663 60.000 0.00 0.00 42.67 4.79
3123 4389 2.268167 TTTCCCGGTGTTTGTCCCGT 62.268 55.000 0.00 0.00 42.67 5.28
3124 4390 1.512156 CTTTCCCGGTGTTTGTCCCG 61.512 60.000 0.00 0.00 43.82 5.14
3125 4391 1.176619 CCTTTCCCGGTGTTTGTCCC 61.177 60.000 0.00 0.00 0.00 4.46
3126 4392 1.176619 CCCTTTCCCGGTGTTTGTCC 61.177 60.000 0.00 0.00 0.00 4.02
3127 4393 0.179012 TCCCTTTCCCGGTGTTTGTC 60.179 55.000 0.00 0.00 0.00 3.18
3128 4394 0.259356 TTCCCTTTCCCGGTGTTTGT 59.741 50.000 0.00 0.00 0.00 2.83
3129 4395 0.671796 GTTCCCTTTCCCGGTGTTTG 59.328 55.000 0.00 0.00 0.00 2.93
3130 4396 0.468585 GGTTCCCTTTCCCGGTGTTT 60.469 55.000 0.00 0.00 0.00 2.83
3131 4397 1.152138 GGTTCCCTTTCCCGGTGTT 59.848 57.895 0.00 0.00 0.00 3.32
3132 4398 2.837326 GGGTTCCCTTTCCCGGTGT 61.837 63.158 0.00 0.00 33.97 4.16
3133 4399 2.035155 GGGTTCCCTTTCCCGGTG 59.965 66.667 0.00 0.00 33.97 4.94
3134 4400 1.440362 AATGGGTTCCCTTTCCCGGT 61.440 55.000 9.43 0.00 46.13 5.28
3135 4401 0.683179 GAATGGGTTCCCTTTCCCGG 60.683 60.000 19.56 0.00 46.13 5.73
3136 4402 0.683179 GGAATGGGTTCCCTTTCCCG 60.683 60.000 29.96 0.00 46.84 5.14
3137 4403 3.300032 GGAATGGGTTCCCTTTCCC 57.700 57.895 29.96 18.92 46.84 3.97
3145 4411 1.749258 GTGCGAGGGGAATGGGTTC 60.749 63.158 0.00 0.00 0.00 3.62
3146 4412 2.355115 GTGCGAGGGGAATGGGTT 59.645 61.111 0.00 0.00 0.00 4.11
3147 4413 3.728373 GGTGCGAGGGGAATGGGT 61.728 66.667 0.00 0.00 0.00 4.51
3148 4414 4.506255 GGGTGCGAGGGGAATGGG 62.506 72.222 0.00 0.00 0.00 4.00
3149 4415 3.704231 CTGGGTGCGAGGGGAATGG 62.704 68.421 0.00 0.00 0.00 3.16
3150 4416 2.124570 CTGGGTGCGAGGGGAATG 60.125 66.667 0.00 0.00 0.00 2.67
3151 4417 3.411517 CCTGGGTGCGAGGGGAAT 61.412 66.667 0.00 0.00 0.00 3.01
3152 4418 4.974438 ACCTGGGTGCGAGGGGAA 62.974 66.667 0.00 0.00 33.54 3.97
3153 4419 4.974438 AACCTGGGTGCGAGGGGA 62.974 66.667 0.00 0.00 33.54 4.81
3154 4420 4.410400 GAACCTGGGTGCGAGGGG 62.410 72.222 0.00 0.00 33.54 4.79
3164 4430 0.613260 TTCATCACCCTCGAACCTGG 59.387 55.000 0.00 0.00 0.00 4.45
3165 4431 1.726853 GTTCATCACCCTCGAACCTG 58.273 55.000 0.00 0.00 34.31 4.00
3168 4434 1.439679 GTGGTTCATCACCCTCGAAC 58.560 55.000 0.00 0.00 46.68 3.95
3169 4435 3.927555 GTGGTTCATCACCCTCGAA 57.072 52.632 0.00 0.00 46.68 3.71
3176 4442 1.024579 ATTCGCCGGTGGTTCATCAC 61.025 55.000 16.49 0.00 36.95 3.06
3177 4443 0.537653 TATTCGCCGGTGGTTCATCA 59.462 50.000 16.49 0.00 0.00 3.07
3178 4444 1.217882 CTATTCGCCGGTGGTTCATC 58.782 55.000 16.49 0.00 0.00 2.92
3179 4445 0.179056 CCTATTCGCCGGTGGTTCAT 60.179 55.000 16.49 5.23 0.00 2.57
3180 4446 1.219664 CCTATTCGCCGGTGGTTCA 59.780 57.895 16.49 0.00 0.00 3.18
3181 4447 0.808847 GACCTATTCGCCGGTGGTTC 60.809 60.000 16.49 0.00 32.62 3.62
3182 4448 1.219935 GACCTATTCGCCGGTGGTT 59.780 57.895 16.49 5.48 32.62 3.67
3183 4449 1.956629 CTGACCTATTCGCCGGTGGT 61.957 60.000 16.49 4.10 32.62 4.16
3184 4450 1.227263 CTGACCTATTCGCCGGTGG 60.227 63.158 16.49 1.03 32.62 4.61
3185 4451 1.883084 GCTGACCTATTCGCCGGTG 60.883 63.158 9.28 9.28 32.62 4.94
3186 4452 2.499685 GCTGACCTATTCGCCGGT 59.500 61.111 1.90 0.00 35.90 5.28
3187 4453 2.421877 ATCGCTGACCTATTCGCCGG 62.422 60.000 0.00 0.00 0.00 6.13
3188 4454 0.597637 AATCGCTGACCTATTCGCCG 60.598 55.000 0.00 0.00 0.00 6.46
3189 4455 2.059541 GTAATCGCTGACCTATTCGCC 58.940 52.381 0.00 0.00 0.00 5.54
3190 4456 2.059541 GGTAATCGCTGACCTATTCGC 58.940 52.381 0.00 0.00 32.58 4.70
3191 4457 3.004419 TGAGGTAATCGCTGACCTATTCG 59.996 47.826 0.00 0.00 46.36 3.34
3192 4458 4.299978 GTGAGGTAATCGCTGACCTATTC 58.700 47.826 0.00 0.00 46.36 1.75
3193 4459 4.323553 GTGAGGTAATCGCTGACCTATT 57.676 45.455 0.00 0.00 46.36 1.73
3202 4468 6.438259 TGCTATATCTAGTGAGGTAATCGC 57.562 41.667 0.00 0.00 38.82 4.58
3203 4469 8.898761 AGAATGCTATATCTAGTGAGGTAATCG 58.101 37.037 0.00 0.00 0.00 3.34
3205 4471 9.760926 TGAGAATGCTATATCTAGTGAGGTAAT 57.239 33.333 0.00 0.00 0.00 1.89
3206 4472 9.237187 CTGAGAATGCTATATCTAGTGAGGTAA 57.763 37.037 0.00 0.00 0.00 2.85
3207 4473 7.338196 GCTGAGAATGCTATATCTAGTGAGGTA 59.662 40.741 0.00 0.00 0.00 3.08
3208 4474 6.152661 GCTGAGAATGCTATATCTAGTGAGGT 59.847 42.308 0.00 0.00 0.00 3.85
3209 4475 6.563422 GCTGAGAATGCTATATCTAGTGAGG 58.437 44.000 0.00 0.00 0.00 3.86
3210 4476 6.093357 TCGCTGAGAATGCTATATCTAGTGAG 59.907 42.308 0.00 0.00 0.00 3.51
3211 4477 5.940470 TCGCTGAGAATGCTATATCTAGTGA 59.060 40.000 0.00 0.00 0.00 3.41
3212 4478 6.188400 TCGCTGAGAATGCTATATCTAGTG 57.812 41.667 0.00 0.00 0.00 2.74
3213 4479 7.554476 TGTATCGCTGAGAATGCTATATCTAGT 59.446 37.037 0.00 0.00 0.00 2.57
3214 4480 7.855409 GTGTATCGCTGAGAATGCTATATCTAG 59.145 40.741 0.00 0.00 0.00 2.43
3215 4481 7.336931 TGTGTATCGCTGAGAATGCTATATCTA 59.663 37.037 0.00 0.00 0.00 1.98
3216 4482 6.151817 TGTGTATCGCTGAGAATGCTATATCT 59.848 38.462 0.00 0.00 0.00 1.98
3217 4483 6.252441 GTGTGTATCGCTGAGAATGCTATATC 59.748 42.308 0.00 0.00 0.00 1.63
3218 4484 6.096036 GTGTGTATCGCTGAGAATGCTATAT 58.904 40.000 0.00 0.00 0.00 0.86
3219 4485 5.009610 TGTGTGTATCGCTGAGAATGCTATA 59.990 40.000 0.00 0.00 0.00 1.31
3220 4486 4.202151 TGTGTGTATCGCTGAGAATGCTAT 60.202 41.667 0.00 0.00 0.00 2.97
3221 4487 3.130340 TGTGTGTATCGCTGAGAATGCTA 59.870 43.478 0.00 0.00 0.00 3.49
3222 4488 2.094026 TGTGTGTATCGCTGAGAATGCT 60.094 45.455 0.00 0.00 0.00 3.79
3223 4489 2.270923 TGTGTGTATCGCTGAGAATGC 58.729 47.619 0.00 0.00 0.00 3.56
3224 4490 4.389992 AGTTTGTGTGTATCGCTGAGAATG 59.610 41.667 0.00 0.00 0.00 2.67
3225 4491 4.569943 AGTTTGTGTGTATCGCTGAGAAT 58.430 39.130 0.00 0.00 0.00 2.40
3226 4492 3.990092 AGTTTGTGTGTATCGCTGAGAA 58.010 40.909 0.00 0.00 0.00 2.87
3227 4493 3.660501 AGTTTGTGTGTATCGCTGAGA 57.339 42.857 0.00 0.00 0.00 3.27
3228 4494 3.612860 GGTAGTTTGTGTGTATCGCTGAG 59.387 47.826 0.00 0.00 0.00 3.35
3229 4495 3.581755 GGTAGTTTGTGTGTATCGCTGA 58.418 45.455 0.00 0.00 0.00 4.26
3230 4496 2.344441 CGGTAGTTTGTGTGTATCGCTG 59.656 50.000 0.00 0.00 0.00 5.18
3231 4497 2.602878 CGGTAGTTTGTGTGTATCGCT 58.397 47.619 0.00 0.00 0.00 4.93
3232 4498 1.060122 GCGGTAGTTTGTGTGTATCGC 59.940 52.381 0.00 0.00 38.94 4.58
3233 4499 2.597305 GAGCGGTAGTTTGTGTGTATCG 59.403 50.000 0.00 0.00 0.00 2.92
3234 4500 2.597305 CGAGCGGTAGTTTGTGTGTATC 59.403 50.000 0.00 0.00 0.00 2.24
3235 4501 2.229543 TCGAGCGGTAGTTTGTGTGTAT 59.770 45.455 0.00 0.00 0.00 2.29
3236 4502 1.608109 TCGAGCGGTAGTTTGTGTGTA 59.392 47.619 0.00 0.00 0.00 2.90
3237 4503 0.386476 TCGAGCGGTAGTTTGTGTGT 59.614 50.000 0.00 0.00 0.00 3.72
3238 4504 1.493772 TTCGAGCGGTAGTTTGTGTG 58.506 50.000 0.00 0.00 0.00 3.82
3239 4505 2.228138 TTTCGAGCGGTAGTTTGTGT 57.772 45.000 0.00 0.00 0.00 3.72
3240 4506 2.993899 AGATTTCGAGCGGTAGTTTGTG 59.006 45.455 0.00 0.00 0.00 3.33
3241 4507 2.993899 CAGATTTCGAGCGGTAGTTTGT 59.006 45.455 0.00 0.00 0.00 2.83
3242 4508 2.222819 GCAGATTTCGAGCGGTAGTTTG 60.223 50.000 0.00 0.00 0.00 2.93
3243 4509 2.000447 GCAGATTTCGAGCGGTAGTTT 59.000 47.619 0.00 0.00 0.00 2.66
3244 4510 1.067142 TGCAGATTTCGAGCGGTAGTT 60.067 47.619 0.00 0.00 0.00 2.24
3245 4511 0.530744 TGCAGATTTCGAGCGGTAGT 59.469 50.000 0.00 0.00 0.00 2.73
3246 4512 1.324736 GTTGCAGATTTCGAGCGGTAG 59.675 52.381 0.00 0.00 0.00 3.18
3247 4513 1.337354 TGTTGCAGATTTCGAGCGGTA 60.337 47.619 0.00 0.00 0.00 4.02
3248 4514 0.602638 TGTTGCAGATTTCGAGCGGT 60.603 50.000 0.00 0.00 0.00 5.68
3249 4515 0.516877 TTGTTGCAGATTTCGAGCGG 59.483 50.000 0.00 0.00 0.00 5.52
3250 4516 1.595609 GTTGTTGCAGATTTCGAGCG 58.404 50.000 0.00 0.00 0.00 5.03
3251 4517 1.266718 TGGTTGTTGCAGATTTCGAGC 59.733 47.619 0.00 0.00 0.00 5.03
3252 4518 2.290367 TGTGGTTGTTGCAGATTTCGAG 59.710 45.455 0.00 0.00 0.00 4.04
3253 4519 2.293170 TGTGGTTGTTGCAGATTTCGA 58.707 42.857 0.00 0.00 0.00 3.71
3254 4520 2.772568 TGTGGTTGTTGCAGATTTCG 57.227 45.000 0.00 0.00 0.00 3.46
3255 4521 4.869861 AGTTTTGTGGTTGTTGCAGATTTC 59.130 37.500 0.00 0.00 0.00 2.17
3256 4522 4.831107 AGTTTTGTGGTTGTTGCAGATTT 58.169 34.783 0.00 0.00 0.00 2.17
3257 4523 4.470334 AGTTTTGTGGTTGTTGCAGATT 57.530 36.364 0.00 0.00 0.00 2.40
3258 4524 5.348164 GTTAGTTTTGTGGTTGTTGCAGAT 58.652 37.500 0.00 0.00 0.00 2.90
3259 4525 4.381079 GGTTAGTTTTGTGGTTGTTGCAGA 60.381 41.667 0.00 0.00 0.00 4.26
3260 4526 3.862845 GGTTAGTTTTGTGGTTGTTGCAG 59.137 43.478 0.00 0.00 0.00 4.41
3261 4527 3.368531 GGGTTAGTTTTGTGGTTGTTGCA 60.369 43.478 0.00 0.00 0.00 4.08
3262 4528 3.191669 GGGTTAGTTTTGTGGTTGTTGC 58.808 45.455 0.00 0.00 0.00 4.17
3263 4529 3.195825 TGGGGTTAGTTTTGTGGTTGTTG 59.804 43.478 0.00 0.00 0.00 3.33
3264 4530 3.442076 TGGGGTTAGTTTTGTGGTTGTT 58.558 40.909 0.00 0.00 0.00 2.83
3265 4531 3.103080 TGGGGTTAGTTTTGTGGTTGT 57.897 42.857 0.00 0.00 0.00 3.32
3266 4532 3.244044 CCATGGGGTTAGTTTTGTGGTTG 60.244 47.826 2.85 0.00 0.00 3.77
3267 4533 2.969262 CCATGGGGTTAGTTTTGTGGTT 59.031 45.455 2.85 0.00 0.00 3.67
3268 4534 2.604139 CCATGGGGTTAGTTTTGTGGT 58.396 47.619 2.85 0.00 0.00 4.16
3269 4535 1.275010 GCCATGGGGTTAGTTTTGTGG 59.725 52.381 15.13 0.00 36.17 4.17
3270 4536 1.967066 TGCCATGGGGTTAGTTTTGTG 59.033 47.619 15.13 0.00 36.17 3.33
3271 4537 1.967779 GTGCCATGGGGTTAGTTTTGT 59.032 47.619 15.13 0.00 36.17 2.83
3272 4538 1.275010 GGTGCCATGGGGTTAGTTTTG 59.725 52.381 15.13 0.00 36.17 2.44
3273 4539 1.133009 TGGTGCCATGGGGTTAGTTTT 60.133 47.619 15.13 0.00 36.17 2.43
3274 4540 0.485099 TGGTGCCATGGGGTTAGTTT 59.515 50.000 15.13 0.00 36.17 2.66
3275 4541 0.251608 GTGGTGCCATGGGGTTAGTT 60.252 55.000 15.13 0.00 36.17 2.24
3276 4542 1.382629 GTGGTGCCATGGGGTTAGT 59.617 57.895 15.13 0.00 36.17 2.24
3277 4543 0.965363 GTGTGGTGCCATGGGGTTAG 60.965 60.000 15.13 0.00 36.17 2.34
3278 4544 1.075836 GTGTGGTGCCATGGGGTTA 59.924 57.895 15.13 0.00 36.17 2.85
3279 4545 2.203625 GTGTGGTGCCATGGGGTT 60.204 61.111 15.13 0.00 36.17 4.11
3280 4546 3.506743 TGTGTGGTGCCATGGGGT 61.507 61.111 15.13 0.00 36.17 4.95
3281 4547 2.990967 GTGTGTGGTGCCATGGGG 60.991 66.667 15.13 0.00 37.18 4.96
3282 4548 2.990967 GGTGTGTGGTGCCATGGG 60.991 66.667 15.13 0.00 0.00 4.00
3283 4549 2.203466 TGGTGTGTGGTGCCATGG 60.203 61.111 7.63 7.63 0.00 3.66
3284 4550 2.922950 GCTGGTGTGTGGTGCCATG 61.923 63.158 0.00 0.00 0.00 3.66
3285 4551 2.598394 GCTGGTGTGTGGTGCCAT 60.598 61.111 0.00 0.00 0.00 4.40
3286 4552 4.892965 GGCTGGTGTGTGGTGCCA 62.893 66.667 0.00 0.00 42.79 4.92
3287 4553 4.586235 AGGCTGGTGTGTGGTGCC 62.586 66.667 0.00 0.00 43.52 5.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.