Multiple sequence alignment - TraesCS2A01G019900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G019900 chr2A 100.000 3850 0 0 1 3850 9179390 9183239 0.000000e+00 7110.0
1 TraesCS2A01G019900 chr2A 95.886 3087 102 5 1 3068 9794302 9791222 0.000000e+00 4974.0
2 TraesCS2A01G019900 chr2A 95.610 3075 100 5 1 3068 9787302 9784256 0.000000e+00 4898.0
3 TraesCS2A01G019900 chr2A 82.222 315 29 11 3540 3850 9783926 9783635 2.970000e-61 246.0
4 TraesCS2A01G019900 chr2A 77.434 226 45 6 2599 2821 27115997 27115775 3.120000e-26 130.0
5 TraesCS2A01G019900 chr2D 93.963 2203 113 8 865 3062 9900405 9902592 0.000000e+00 3314.0
6 TraesCS2A01G019900 chr2D 94.805 385 18 2 270 653 9899405 9899788 1.980000e-167 599.0
7 TraesCS2A01G019900 chr2D 96.250 240 8 1 651 889 9899821 9900060 3.610000e-105 392.0
8 TraesCS2A01G019900 chr2B 92.304 1962 135 11 970 2927 13401992 13403941 0.000000e+00 2772.0
9 TraesCS2A01G019900 chr2B 95.085 936 36 5 651 1577 13364463 13365397 0.000000e+00 1465.0
10 TraesCS2A01G019900 chr2B 89.397 896 81 7 2170 3065 13366413 13367294 0.000000e+00 1116.0
11 TraesCS2A01G019900 chr2B 95.797 571 14 3 1569 2139 13365855 13366415 0.000000e+00 913.0
12 TraesCS2A01G019900 chr2B 88.057 561 29 7 347 884 13401401 13401946 7.020000e-177 630.0
13 TraesCS2A01G019900 chr2B 97.407 270 6 1 1 269 742416903 742417172 3.510000e-125 459.0
14 TraesCS2A01G019900 chr2B 93.636 220 12 2 436 655 13364218 13364435 1.030000e-85 327.0
15 TraesCS2A01G019900 chr2B 96.078 51 2 0 270 320 13401349 13401399 2.460000e-12 84.2
16 TraesCS2A01G019900 chr5B 97.059 272 8 0 1 272 38110169 38109898 3.510000e-125 459.0
17 TraesCS2A01G019900 chr3A 97.026 269 8 0 1 269 8177450 8177182 1.630000e-123 453.0
18 TraesCS2A01G019900 chr6B 96.691 272 8 1 1 271 669853072 669852801 5.870000e-123 451.0
19 TraesCS2A01G019900 chr7A 96.679 271 6 3 1 270 23786263 23786531 7.590000e-122 448.0
20 TraesCS2A01G019900 chr1A 96.654 269 9 0 1 269 539503581 539503313 7.590000e-122 448.0
21 TraesCS2A01G019900 chr4A 95.636 275 12 0 1 275 618847060 618847334 3.530000e-120 442.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G019900 chr2A 9179390 9183239 3849 False 7110.000000 7110 100.000000 1 3850 1 chr2A.!!$F1 3849
1 TraesCS2A01G019900 chr2A 9783635 9794302 10667 True 3372.666667 4974 91.239333 1 3850 3 chr2A.!!$R2 3849
2 TraesCS2A01G019900 chr2D 9899405 9902592 3187 False 1435.000000 3314 95.006000 270 3062 3 chr2D.!!$F1 2792
3 TraesCS2A01G019900 chr2B 13401349 13403941 2592 False 1162.066667 2772 92.146333 270 2927 3 chr2B.!!$F3 2657
4 TraesCS2A01G019900 chr2B 13364218 13367294 3076 False 955.250000 1465 93.478750 436 3065 4 chr2B.!!$F2 2629

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
59 60 0.532417 AGATTGATGGAGCTGCTCGC 60.532 55.000 22.25 15.63 39.57 5.03 F
182 183 0.681243 GACAGGGTTTGGATCTGGGC 60.681 60.000 0.00 0.00 33.19 5.36 F
1516 1985 1.202651 CGGTCCAGGAGTTCTGTTTGT 60.203 52.381 0.00 0.00 41.83 2.83 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1517 1986 0.252696 TCCTGGTAGCCATGTCCACT 60.253 55.0 0.0 0.0 30.82 4.00 R
2051 2988 1.040339 TTTTTCCCAGCCTTGCACGT 61.040 50.0 0.0 0.0 0.00 4.49 R
3203 11131 0.031449 AAATGTGAAAACCACCGCCG 59.969 50.0 0.0 0.0 45.09 6.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
59 60 0.532417 AGATTGATGGAGCTGCTCGC 60.532 55.000 22.25 15.63 39.57 5.03
142 143 4.199310 GACCAGGGTACTGTACGTATACA 58.801 47.826 11.52 0.00 43.36 2.29
159 160 5.048224 CGTATACAGTCTGGGTTATACAGGG 60.048 48.000 14.67 1.79 36.62 4.45
170 171 3.306613 GTTATACAGGGCTAGACAGGGT 58.693 50.000 0.00 0.00 0.00 4.34
182 183 0.681243 GACAGGGTTTGGATCTGGGC 60.681 60.000 0.00 0.00 33.19 5.36
492 493 8.204836 AGTTTGTGACTAGTCATGAGTAGTTTT 58.795 33.333 33.51 18.29 44.99 2.43
576 577 7.563724 AGGACCAAGACCAAACTATTAGTTA 57.436 36.000 9.43 0.00 37.47 2.24
769 839 2.923121 TCTTTTCAGCTTCAGTGCAGT 58.077 42.857 0.00 0.00 34.99 4.40
863 934 5.804944 ATCTCTCTCTCTCTCTCTCTCTG 57.195 47.826 0.00 0.00 0.00 3.35
946 1415 4.104383 TGTTTTCCTTCATCCTCAGCTT 57.896 40.909 0.00 0.00 0.00 3.74
982 1451 2.880963 TTTGTTAGCCAGGTTTGCAC 57.119 45.000 0.00 0.00 0.00 4.57
998 1467 1.370900 CACAAAGTTGAGCGCTGCC 60.371 57.895 18.48 0.38 0.00 4.85
1121 1590 7.397221 AGAATCAGAACCATTCATCTTACACA 58.603 34.615 0.00 0.00 33.34 3.72
1516 1985 1.202651 CGGTCCAGGAGTTCTGTTTGT 60.203 52.381 0.00 0.00 41.83 2.83
1517 1986 2.036733 CGGTCCAGGAGTTCTGTTTGTA 59.963 50.000 0.00 0.00 41.83 2.41
1565 2034 2.570415 TCCGATTTTGTACCAAGGCA 57.430 45.000 0.00 0.00 0.00 4.75
1821 2758 5.979517 GCTTGATATGGGAACTTTTGTATGC 59.020 40.000 0.00 0.00 0.00 3.14
2067 3004 2.594303 CACGTGCAAGGCTGGGAA 60.594 61.111 0.82 0.00 0.00 3.97
2168 3105 2.475685 CGATGTGTTGCAGAGCTTCATG 60.476 50.000 0.00 0.00 0.00 3.07
2204 3141 2.531672 TGGCCGATCCATGACAGAT 58.468 52.632 0.00 0.00 40.72 2.90
2243 3180 1.741706 CTCATTGCCATCTTGTTCGCT 59.258 47.619 0.00 0.00 0.00 4.93
2322 3259 1.442769 AAAGTACATGACAGCTGCCG 58.557 50.000 15.27 1.88 0.00 5.69
2347 3284 5.184479 TGGAAGAGCAGAAGAAAATCATTGG 59.816 40.000 0.00 0.00 0.00 3.16
2348 3285 5.416952 GGAAGAGCAGAAGAAAATCATTGGA 59.583 40.000 0.00 0.00 0.00 3.53
2354 3291 6.703165 AGCAGAAGAAAATCATTGGACAAAAC 59.297 34.615 0.00 0.00 0.00 2.43
2382 3319 3.711704 ACCCATAGACTACACCATCTTGG 59.288 47.826 0.00 0.00 45.02 3.61
2408 3345 1.305219 TGGATACCTTGCGTTGCTGC 61.305 55.000 0.00 0.00 0.00 5.25
2438 3375 1.957591 GCACTGAGGCTCTACTCTCCA 60.958 57.143 16.72 0.00 38.32 3.86
2445 3382 0.246635 GCTCTACTCTCCAACGCCAA 59.753 55.000 0.00 0.00 0.00 4.52
2456 3393 1.135527 CCAACGCCAATACTACTCCGA 59.864 52.381 0.00 0.00 0.00 4.55
2484 3421 0.236711 CAAGAGCTTCACCGTGCAAG 59.763 55.000 0.00 0.00 0.00 4.01
2580 3517 7.339466 AGTTGCCTTACATTTATAAGAACCCTG 59.661 37.037 0.00 0.00 34.59 4.45
2605 3542 1.001378 GTATGATCCATGCCGGTTTGC 60.001 52.381 1.90 0.00 35.57 3.68
2626 3563 1.454847 CGGGGAGAGAGGAGGACAG 60.455 68.421 0.00 0.00 0.00 3.51
2636 3573 4.452733 GAGGACAGAACCGGCGGG 62.453 72.222 31.78 14.93 40.11 6.13
2730 3667 6.252599 TCAAGGTGATATGGAGCTATTTGT 57.747 37.500 0.00 0.00 0.00 2.83
2793 3730 8.920665 CCGAGCTAGAGAATGACAAAATATTAG 58.079 37.037 0.00 0.00 0.00 1.73
2843 3780 8.964772 GTTACTTACAGGAGAAGGTCAATAGTA 58.035 37.037 0.00 0.00 0.00 1.82
2851 3788 8.207545 CAGGAGAAGGTCAATAGTAAATTAGCT 58.792 37.037 0.00 0.00 0.00 3.32
2869 3806 1.005975 GCTCGCATGCACGTAAACTAG 60.006 52.381 19.57 0.00 0.00 2.57
2896 3833 7.766738 TGAGTTTGTAATCTAACTGTGTGTTGA 59.233 33.333 0.00 0.00 39.07 3.18
3047 10949 5.522460 GGTCATGTGTATATGTGTGTACACC 59.478 44.000 22.91 14.38 46.40 4.16
3075 11003 6.824305 AGTTATGCTTGTTTTGCTCTATGT 57.176 33.333 0.00 0.00 0.00 2.29
3120 11048 8.809159 TTATTTTATGATGTGTGTGTGTTTGG 57.191 30.769 0.00 0.00 0.00 3.28
3121 11049 4.844998 TTATGATGTGTGTGTGTTTGGG 57.155 40.909 0.00 0.00 0.00 4.12
3122 11050 1.397672 TGATGTGTGTGTGTTTGGGG 58.602 50.000 0.00 0.00 0.00 4.96
3123 11051 0.673437 GATGTGTGTGTGTTTGGGGG 59.327 55.000 0.00 0.00 0.00 5.40
3140 11068 3.242291 GGGCTATGTCCCCCTCGG 61.242 72.222 0.00 0.00 40.51 4.63
3150 11078 3.793888 CCCCTCGGGTGGGCTTAC 61.794 72.222 0.55 0.00 45.78 2.34
3151 11079 3.793888 CCCTCGGGTGGGCTTACC 61.794 72.222 3.33 3.33 40.84 2.85
3162 11090 0.808755 GGGCTTACCAATTGTCACCG 59.191 55.000 4.43 0.00 39.85 4.94
3163 11091 0.808755 GGCTTACCAATTGTCACCGG 59.191 55.000 0.00 0.00 35.26 5.28
3164 11092 1.530323 GCTTACCAATTGTCACCGGT 58.470 50.000 0.00 0.00 35.46 5.28
3165 11093 1.199097 GCTTACCAATTGTCACCGGTG 59.801 52.381 29.26 29.26 32.81 4.94
3166 11094 2.773487 CTTACCAATTGTCACCGGTGA 58.227 47.619 33.23 33.23 37.24 4.02
3167 11095 3.343617 CTTACCAATTGTCACCGGTGAT 58.656 45.455 38.11 23.24 42.18 3.06
3168 11096 4.509616 CTTACCAATTGTCACCGGTGATA 58.490 43.478 38.11 33.05 42.18 2.15
3169 11097 2.985896 ACCAATTGTCACCGGTGATAG 58.014 47.619 38.11 24.95 42.18 2.08
3170 11098 2.304761 ACCAATTGTCACCGGTGATAGT 59.695 45.455 38.11 29.37 42.18 2.12
3171 11099 2.936498 CCAATTGTCACCGGTGATAGTC 59.064 50.000 38.11 25.56 42.18 2.59
3172 11100 3.369471 CCAATTGTCACCGGTGATAGTCT 60.369 47.826 38.11 20.97 42.18 3.24
3173 11101 4.142026 CCAATTGTCACCGGTGATAGTCTA 60.142 45.833 38.11 21.67 42.18 2.59
3174 11102 4.650754 ATTGTCACCGGTGATAGTCTAC 57.349 45.455 38.11 24.30 42.18 2.59
3175 11103 2.011947 TGTCACCGGTGATAGTCTACG 58.988 52.381 38.11 7.79 42.18 3.51
3176 11104 2.012673 GTCACCGGTGATAGTCTACGT 58.987 52.381 38.11 0.00 42.18 3.57
3177 11105 2.421424 GTCACCGGTGATAGTCTACGTT 59.579 50.000 38.11 0.00 42.18 3.99
3178 11106 3.084039 TCACCGGTGATAGTCTACGTTT 58.916 45.455 33.23 0.00 34.14 3.60
3179 11107 3.119743 TCACCGGTGATAGTCTACGTTTG 60.120 47.826 33.23 1.81 34.14 2.93
3180 11108 2.821969 ACCGGTGATAGTCTACGTTTGT 59.178 45.455 6.12 0.00 0.00 2.83
3181 11109 3.256631 ACCGGTGATAGTCTACGTTTGTT 59.743 43.478 6.12 0.00 0.00 2.83
3182 11110 3.611113 CCGGTGATAGTCTACGTTTGTTG 59.389 47.826 0.00 0.00 0.00 3.33
3183 11111 3.611113 CGGTGATAGTCTACGTTTGTTGG 59.389 47.826 0.00 0.00 0.00 3.77
3184 11112 4.563061 GGTGATAGTCTACGTTTGTTGGT 58.437 43.478 0.00 0.00 0.00 3.67
3185 11113 4.992951 GGTGATAGTCTACGTTTGTTGGTT 59.007 41.667 0.00 0.00 0.00 3.67
3186 11114 5.107220 GGTGATAGTCTACGTTTGTTGGTTG 60.107 44.000 0.00 0.00 0.00 3.77
3187 11115 5.693104 GTGATAGTCTACGTTTGTTGGTTGA 59.307 40.000 0.00 0.00 0.00 3.18
3188 11116 5.693104 TGATAGTCTACGTTTGTTGGTTGAC 59.307 40.000 0.00 0.00 38.57 3.18
3189 11117 4.133013 AGTCTACGTTTGTTGGTTGACT 57.867 40.909 0.00 3.14 41.91 3.41
3190 11118 3.869246 AGTCTACGTTTGTTGGTTGACTG 59.131 43.478 0.00 0.00 43.90 3.51
3191 11119 3.866910 GTCTACGTTTGTTGGTTGACTGA 59.133 43.478 0.00 0.00 36.45 3.41
3192 11120 4.025979 GTCTACGTTTGTTGGTTGACTGAG 60.026 45.833 0.00 0.00 36.45 3.35
3193 11121 2.706890 ACGTTTGTTGGTTGACTGAGT 58.293 42.857 0.00 0.00 0.00 3.41
3194 11122 3.078837 ACGTTTGTTGGTTGACTGAGTT 58.921 40.909 0.00 0.00 0.00 3.01
3195 11123 3.504520 ACGTTTGTTGGTTGACTGAGTTT 59.495 39.130 0.00 0.00 0.00 2.66
3196 11124 3.851403 CGTTTGTTGGTTGACTGAGTTTG 59.149 43.478 0.00 0.00 0.00 2.93
3197 11125 4.173256 GTTTGTTGGTTGACTGAGTTTGG 58.827 43.478 0.00 0.00 0.00 3.28
3198 11126 1.748493 TGTTGGTTGACTGAGTTTGGC 59.252 47.619 0.00 0.00 0.00 4.52
3199 11127 1.067060 GTTGGTTGACTGAGTTTGGCC 59.933 52.381 0.00 0.00 0.00 5.36
3200 11128 0.817634 TGGTTGACTGAGTTTGGCCG 60.818 55.000 0.00 0.00 0.00 6.13
3201 11129 1.515521 GGTTGACTGAGTTTGGCCGG 61.516 60.000 0.00 0.00 0.00 6.13
3202 11130 0.818040 GTTGACTGAGTTTGGCCGGT 60.818 55.000 1.90 0.00 0.00 5.28
3203 11131 0.534203 TTGACTGAGTTTGGCCGGTC 60.534 55.000 0.00 0.00 38.73 4.79
3204 11132 2.027625 GACTGAGTTTGGCCGGTCG 61.028 63.158 0.00 0.00 0.00 4.79
3205 11133 2.742372 CTGAGTTTGGCCGGTCGG 60.742 66.667 0.00 4.85 38.57 4.79
3216 11144 3.719144 CGGTCGGCGGTGGTTTTC 61.719 66.667 7.21 0.00 0.00 2.29
3217 11145 2.592287 GGTCGGCGGTGGTTTTCA 60.592 61.111 7.21 0.00 0.00 2.69
3218 11146 2.635338 GTCGGCGGTGGTTTTCAC 59.365 61.111 7.21 0.00 45.34 3.18
3230 11158 5.757850 GTGGTTTTCACATTTGTCTCTCT 57.242 39.130 0.00 0.00 45.39 3.10
3231 11159 5.752712 GTGGTTTTCACATTTGTCTCTCTC 58.247 41.667 0.00 0.00 45.39 3.20
3232 11160 4.821805 TGGTTTTCACATTTGTCTCTCTCC 59.178 41.667 0.00 0.00 0.00 3.71
3233 11161 4.083802 GGTTTTCACATTTGTCTCTCTCCG 60.084 45.833 0.00 0.00 0.00 4.63
3234 11162 3.319137 TTCACATTTGTCTCTCTCCGG 57.681 47.619 0.00 0.00 0.00 5.14
3235 11163 2.525368 TCACATTTGTCTCTCTCCGGA 58.475 47.619 2.93 2.93 0.00 5.14
3236 11164 2.897326 TCACATTTGTCTCTCTCCGGAA 59.103 45.455 5.23 0.00 0.00 4.30
3237 11165 3.056536 TCACATTTGTCTCTCTCCGGAAG 60.057 47.826 5.23 6.46 0.00 3.46
3249 11177 4.932789 CGGAAGGATCGAGCCAAA 57.067 55.556 23.83 0.00 0.00 3.28
3250 11178 2.682893 CGGAAGGATCGAGCCAAAG 58.317 57.895 23.83 6.29 0.00 2.77
3251 11179 1.432270 CGGAAGGATCGAGCCAAAGC 61.432 60.000 23.83 7.51 40.32 3.51
3252 11180 0.392998 GGAAGGATCGAGCCAAAGCA 60.393 55.000 23.83 0.00 43.56 3.91
3253 11181 1.673168 GAAGGATCGAGCCAAAGCAT 58.327 50.000 23.83 0.00 43.56 3.79
3254 11182 1.601430 GAAGGATCGAGCCAAAGCATC 59.399 52.381 23.83 6.21 43.56 3.91
3255 11183 0.835941 AGGATCGAGCCAAAGCATCT 59.164 50.000 23.83 0.00 43.56 2.90
3256 11184 0.942962 GGATCGAGCCAAAGCATCTG 59.057 55.000 16.44 0.00 43.56 2.90
3257 11185 0.307146 GATCGAGCCAAAGCATCTGC 59.693 55.000 0.00 0.00 43.56 4.26
3258 11186 1.099879 ATCGAGCCAAAGCATCTGCC 61.100 55.000 0.00 0.00 43.56 4.85
3259 11187 2.796651 GAGCCAAAGCATCTGCCG 59.203 61.111 0.00 0.00 43.56 5.69
3260 11188 3.407046 GAGCCAAAGCATCTGCCGC 62.407 63.158 0.00 0.00 43.56 6.53
3261 11189 4.503314 GCCAAAGCATCTGCCGCC 62.503 66.667 0.00 0.00 43.38 6.13
3262 11190 4.183686 CCAAAGCATCTGCCGCCG 62.184 66.667 0.00 0.00 43.38 6.46
3263 11191 4.842091 CAAAGCATCTGCCGCCGC 62.842 66.667 0.00 0.00 43.38 6.53
3268 11196 3.869272 CATCTGCCGCCGCTTCAC 61.869 66.667 0.00 0.00 35.36 3.18
3274 11202 2.978010 CCGCCGCTTCACCACTTT 60.978 61.111 0.00 0.00 0.00 2.66
3275 11203 1.669760 CCGCCGCTTCACCACTTTA 60.670 57.895 0.00 0.00 0.00 1.85
3276 11204 1.024579 CCGCCGCTTCACCACTTTAT 61.025 55.000 0.00 0.00 0.00 1.40
3277 11205 0.373716 CGCCGCTTCACCACTTTATC 59.626 55.000 0.00 0.00 0.00 1.75
3278 11206 0.733150 GCCGCTTCACCACTTTATCC 59.267 55.000 0.00 0.00 0.00 2.59
3279 11207 1.379527 CCGCTTCACCACTTTATCCC 58.620 55.000 0.00 0.00 0.00 3.85
3280 11208 1.006832 CGCTTCACCACTTTATCCCG 58.993 55.000 0.00 0.00 0.00 5.14
3281 11209 1.404986 CGCTTCACCACTTTATCCCGA 60.405 52.381 0.00 0.00 0.00 5.14
3282 11210 2.280628 GCTTCACCACTTTATCCCGAG 58.719 52.381 0.00 0.00 0.00 4.63
3283 11211 2.093658 GCTTCACCACTTTATCCCGAGA 60.094 50.000 0.00 0.00 0.00 4.04
3284 11212 3.432326 GCTTCACCACTTTATCCCGAGAT 60.432 47.826 0.00 0.00 36.44 2.75
3285 11213 4.372656 CTTCACCACTTTATCCCGAGATC 58.627 47.826 0.00 0.00 33.67 2.75
3286 11214 2.698797 TCACCACTTTATCCCGAGATCC 59.301 50.000 0.00 0.00 33.67 3.36
3287 11215 2.434336 CACCACTTTATCCCGAGATCCA 59.566 50.000 0.00 0.00 33.67 3.41
3288 11216 2.700897 ACCACTTTATCCCGAGATCCAG 59.299 50.000 0.00 0.00 33.67 3.86
3289 11217 2.548920 CCACTTTATCCCGAGATCCAGC 60.549 54.545 0.00 0.00 33.67 4.85
3290 11218 1.341531 ACTTTATCCCGAGATCCAGCG 59.658 52.381 0.00 0.00 33.67 5.18
3291 11219 1.613925 CTTTATCCCGAGATCCAGCGA 59.386 52.381 2.24 0.00 33.67 4.93
3292 11220 1.248486 TTATCCCGAGATCCAGCGAG 58.752 55.000 2.24 0.00 33.67 5.03
3293 11221 0.110678 TATCCCGAGATCCAGCGAGT 59.889 55.000 2.24 0.00 33.67 4.18
3294 11222 1.175983 ATCCCGAGATCCAGCGAGTC 61.176 60.000 2.24 0.00 0.00 3.36
3295 11223 1.826054 CCCGAGATCCAGCGAGTCT 60.826 63.158 2.24 0.00 0.00 3.24
3296 11224 1.652012 CCGAGATCCAGCGAGTCTC 59.348 63.158 2.24 0.00 36.02 3.36
3297 11225 0.817634 CCGAGATCCAGCGAGTCTCT 60.818 60.000 0.00 0.00 36.97 3.10
3298 11226 0.586319 CGAGATCCAGCGAGTCTCTC 59.414 60.000 0.00 0.00 36.97 3.20
3299 11227 1.674359 GAGATCCAGCGAGTCTCTCA 58.326 55.000 0.00 0.00 36.36 3.27
3300 11228 2.020720 GAGATCCAGCGAGTCTCTCAA 58.979 52.381 0.00 0.00 36.36 3.02
3301 11229 2.425312 GAGATCCAGCGAGTCTCTCAAA 59.575 50.000 0.00 0.00 36.36 2.69
3302 11230 3.030291 AGATCCAGCGAGTCTCTCAAAT 58.970 45.455 0.00 0.00 0.00 2.32
3303 11231 4.211125 AGATCCAGCGAGTCTCTCAAATA 58.789 43.478 0.00 0.00 0.00 1.40
3305 11233 2.427453 TCCAGCGAGTCTCTCAAATACC 59.573 50.000 0.00 0.00 0.00 2.73
3306 11234 2.482142 CCAGCGAGTCTCTCAAATACCC 60.482 54.545 0.00 0.00 0.00 3.69
3307 11235 2.166459 CAGCGAGTCTCTCAAATACCCA 59.834 50.000 0.00 0.00 0.00 4.51
3308 11236 2.166664 AGCGAGTCTCTCAAATACCCAC 59.833 50.000 0.00 0.00 0.00 4.61
3309 11237 2.738964 GCGAGTCTCTCAAATACCCACC 60.739 54.545 0.00 0.00 0.00 4.61
3310 11238 2.496070 CGAGTCTCTCAAATACCCACCA 59.504 50.000 0.00 0.00 0.00 4.17
3311 11239 3.133003 CGAGTCTCTCAAATACCCACCAT 59.867 47.826 0.00 0.00 0.00 3.55
3312 11240 4.341235 CGAGTCTCTCAAATACCCACCATA 59.659 45.833 0.00 0.00 0.00 2.74
3313 11241 5.602628 GAGTCTCTCAAATACCCACCATAC 58.397 45.833 0.00 0.00 0.00 2.39
3314 11242 4.409247 AGTCTCTCAAATACCCACCATACC 59.591 45.833 0.00 0.00 0.00 2.73
3315 11243 3.714798 TCTCTCAAATACCCACCATACCC 59.285 47.826 0.00 0.00 0.00 3.69
3316 11244 3.458118 CTCTCAAATACCCACCATACCCA 59.542 47.826 0.00 0.00 0.00 4.51
3317 11245 3.201266 TCTCAAATACCCACCATACCCAC 59.799 47.826 0.00 0.00 0.00 4.61
3318 11246 2.920271 TCAAATACCCACCATACCCACA 59.080 45.455 0.00 0.00 0.00 4.17
3319 11247 3.333980 TCAAATACCCACCATACCCACAA 59.666 43.478 0.00 0.00 0.00 3.33
3321 11249 3.876309 ATACCCACCATACCCACAATC 57.124 47.619 0.00 0.00 0.00 2.67
3322 11250 0.254747 ACCCACCATACCCACAATCG 59.745 55.000 0.00 0.00 0.00 3.34
3323 11251 0.254747 CCCACCATACCCACAATCGT 59.745 55.000 0.00 0.00 0.00 3.73
3324 11252 1.340600 CCCACCATACCCACAATCGTT 60.341 52.381 0.00 0.00 0.00 3.85
3325 11253 2.014128 CCACCATACCCACAATCGTTC 58.986 52.381 0.00 0.00 0.00 3.95
3326 11254 2.014128 CACCATACCCACAATCGTTCC 58.986 52.381 0.00 0.00 0.00 3.62
3327 11255 1.913419 ACCATACCCACAATCGTTCCT 59.087 47.619 0.00 0.00 0.00 3.36
3328 11256 2.093128 ACCATACCCACAATCGTTCCTC 60.093 50.000 0.00 0.00 0.00 3.71
3329 11257 2.561569 CATACCCACAATCGTTCCTCC 58.438 52.381 0.00 0.00 0.00 4.30
3330 11258 0.906775 TACCCACAATCGTTCCTCCC 59.093 55.000 0.00 0.00 0.00 4.30
3331 11259 1.449601 CCCACAATCGTTCCTCCCG 60.450 63.158 0.00 0.00 0.00 5.14
3332 11260 1.594833 CCACAATCGTTCCTCCCGA 59.405 57.895 0.00 0.00 38.89 5.14
3333 11261 0.739813 CCACAATCGTTCCTCCCGAC 60.740 60.000 0.00 0.00 37.12 4.79
3334 11262 0.739813 CACAATCGTTCCTCCCGACC 60.740 60.000 0.00 0.00 37.12 4.79
3335 11263 0.903454 ACAATCGTTCCTCCCGACCT 60.903 55.000 0.00 0.00 37.12 3.85
3336 11264 0.179108 CAATCGTTCCTCCCGACCTC 60.179 60.000 0.00 0.00 37.12 3.85
3337 11265 0.613853 AATCGTTCCTCCCGACCTCA 60.614 55.000 0.00 0.00 37.12 3.86
3338 11266 1.321074 ATCGTTCCTCCCGACCTCAC 61.321 60.000 0.00 0.00 37.12 3.51
3339 11267 2.979649 GTTCCTCCCGACCTCACC 59.020 66.667 0.00 0.00 0.00 4.02
3340 11268 2.678934 TTCCTCCCGACCTCACCG 60.679 66.667 0.00 0.00 0.00 4.94
3348 11276 4.008933 GACCTCACCGCCAGCAGT 62.009 66.667 0.00 0.00 0.00 4.40
3349 11277 4.320456 ACCTCACCGCCAGCAGTG 62.320 66.667 0.00 0.00 35.24 3.66
3361 11289 2.282040 GCAGTGCCTTGCTGGAGT 60.282 61.111 2.85 0.00 40.89 3.85
3362 11290 1.900498 GCAGTGCCTTGCTGGAGTT 60.900 57.895 2.85 0.00 40.89 3.01
3363 11291 1.458639 GCAGTGCCTTGCTGGAGTTT 61.459 55.000 2.85 0.00 40.89 2.66
3364 11292 0.595095 CAGTGCCTTGCTGGAGTTTC 59.405 55.000 0.49 0.00 38.35 2.78
3365 11293 0.538287 AGTGCCTTGCTGGAGTTTCC 60.538 55.000 0.49 0.00 38.35 3.13
3375 11303 2.178912 TGGAGTTTCCATTGTCGTCC 57.821 50.000 0.00 0.00 42.67 4.79
3376 11304 1.271163 TGGAGTTTCCATTGTCGTCCC 60.271 52.381 0.00 0.00 42.67 4.46
3377 11305 1.076332 GAGTTTCCATTGTCGTCCCG 58.924 55.000 0.00 0.00 0.00 5.14
3378 11306 0.395312 AGTTTCCATTGTCGTCCCGT 59.605 50.000 0.00 0.00 0.00 5.28
3379 11307 0.794473 GTTTCCATTGTCGTCCCGTC 59.206 55.000 0.00 0.00 0.00 4.79
3380 11308 0.668096 TTTCCATTGTCGTCCCGTCG 60.668 55.000 0.00 0.00 0.00 5.12
3381 11309 3.186047 CCATTGTCGTCCCGTCGC 61.186 66.667 0.00 0.00 0.00 5.19
3382 11310 2.431771 CATTGTCGTCCCGTCGCA 60.432 61.111 0.00 0.00 0.00 5.10
3383 11311 1.809619 CATTGTCGTCCCGTCGCAT 60.810 57.895 0.00 0.00 0.00 4.73
3384 11312 1.518572 ATTGTCGTCCCGTCGCATC 60.519 57.895 0.00 0.00 0.00 3.91
3385 11313 2.220615 ATTGTCGTCCCGTCGCATCA 62.221 55.000 0.00 0.00 0.00 3.07
3386 11314 2.579787 GTCGTCCCGTCGCATCAG 60.580 66.667 0.00 0.00 0.00 2.90
3387 11315 3.822192 TCGTCCCGTCGCATCAGG 61.822 66.667 0.00 0.00 0.00 3.86
3389 11317 4.451150 GTCCCGTCGCATCAGGCA 62.451 66.667 0.00 0.00 45.17 4.75
3390 11318 3.700970 TCCCGTCGCATCAGGCAA 61.701 61.111 0.00 0.00 45.17 4.52
3391 11319 2.745884 CCCGTCGCATCAGGCAAA 60.746 61.111 0.00 0.00 45.17 3.68
3392 11320 2.480555 CCGTCGCATCAGGCAAAC 59.519 61.111 0.00 0.00 45.17 2.93
3393 11321 2.034879 CCGTCGCATCAGGCAAACT 61.035 57.895 0.00 0.00 45.17 2.66
3394 11322 0.739462 CCGTCGCATCAGGCAAACTA 60.739 55.000 0.00 0.00 45.17 2.24
3395 11323 0.370273 CGTCGCATCAGGCAAACTAC 59.630 55.000 0.00 0.00 45.17 2.73
3396 11324 1.438651 GTCGCATCAGGCAAACTACA 58.561 50.000 0.00 0.00 45.17 2.74
3397 11325 1.128692 GTCGCATCAGGCAAACTACAC 59.871 52.381 0.00 0.00 45.17 2.90
3398 11326 0.095245 CGCATCAGGCAAACTACACG 59.905 55.000 0.00 0.00 45.17 4.49
3399 11327 1.156736 GCATCAGGCAAACTACACGT 58.843 50.000 0.00 0.00 43.97 4.49
3400 11328 1.535462 GCATCAGGCAAACTACACGTT 59.465 47.619 0.00 0.00 43.97 3.99
3401 11329 2.665519 GCATCAGGCAAACTACACGTTG 60.666 50.000 0.00 0.00 43.97 4.10
3402 11330 2.319136 TCAGGCAAACTACACGTTGT 57.681 45.000 0.00 0.00 35.61 3.32
3403 11331 1.937223 TCAGGCAAACTACACGTTGTG 59.063 47.619 0.00 0.00 39.75 3.33
3404 11332 1.002900 CAGGCAAACTACACGTTGTGG 60.003 52.381 1.64 0.00 37.94 4.17
3405 11333 0.317519 GGCAAACTACACGTTGTGGC 60.318 55.000 1.64 0.00 37.94 5.01
3406 11334 0.661020 GCAAACTACACGTTGTGGCT 59.339 50.000 1.64 0.00 37.94 4.75
3407 11335 1.333791 GCAAACTACACGTTGTGGCTC 60.334 52.381 1.64 0.00 37.94 4.70
3408 11336 2.210116 CAAACTACACGTTGTGGCTCT 58.790 47.619 1.64 0.00 37.94 4.09
3409 11337 2.150397 AACTACACGTTGTGGCTCTC 57.850 50.000 1.64 0.00 37.94 3.20
3410 11338 0.039437 ACTACACGTTGTGGCTCTCG 60.039 55.000 1.64 0.00 37.94 4.04
3411 11339 0.732880 CTACACGTTGTGGCTCTCGG 60.733 60.000 1.64 2.70 37.94 4.63
3412 11340 2.758770 TACACGTTGTGGCTCTCGGC 62.759 60.000 1.64 0.00 37.94 5.54
3415 11343 2.665185 GTTGTGGCTCTCGGCGTT 60.665 61.111 6.85 0.00 42.94 4.84
3416 11344 2.357034 TTGTGGCTCTCGGCGTTC 60.357 61.111 6.85 0.00 42.94 3.95
3417 11345 3.158537 TTGTGGCTCTCGGCGTTCA 62.159 57.895 6.85 0.00 42.94 3.18
3418 11346 2.125512 GTGGCTCTCGGCGTTCAT 60.126 61.111 6.85 0.00 42.94 2.57
3419 11347 2.125552 TGGCTCTCGGCGTTCATG 60.126 61.111 6.85 0.00 42.94 3.07
3420 11348 2.125512 GGCTCTCGGCGTTCATGT 60.126 61.111 6.85 0.00 42.94 3.21
3421 11349 1.141019 GGCTCTCGGCGTTCATGTA 59.859 57.895 6.85 0.00 42.94 2.29
3422 11350 1.146358 GGCTCTCGGCGTTCATGTAC 61.146 60.000 6.85 0.00 42.94 2.90
3423 11351 1.146358 GCTCTCGGCGTTCATGTACC 61.146 60.000 6.85 0.00 0.00 3.34
3424 11352 0.527817 CTCTCGGCGTTCATGTACCC 60.528 60.000 6.85 0.00 0.00 3.69
3425 11353 1.520787 CTCGGCGTTCATGTACCCC 60.521 63.158 6.85 0.00 0.00 4.95
3426 11354 2.888534 CGGCGTTCATGTACCCCG 60.889 66.667 13.18 13.18 33.66 5.73
3427 11355 2.512974 GGCGTTCATGTACCCCGG 60.513 66.667 0.00 0.00 0.00 5.73
3428 11356 2.266689 GCGTTCATGTACCCCGGT 59.733 61.111 0.00 0.00 0.00 5.28
3429 11357 2.104253 GCGTTCATGTACCCCGGTG 61.104 63.158 0.00 0.00 0.00 4.94
3430 11358 2.104253 CGTTCATGTACCCCGGTGC 61.104 63.158 0.00 0.00 0.00 5.01
3431 11359 2.104253 GTTCATGTACCCCGGTGCG 61.104 63.158 0.00 0.00 33.40 5.34
3432 11360 2.284276 TTCATGTACCCCGGTGCGA 61.284 57.895 0.00 0.00 33.40 5.10
3433 11361 1.618876 TTCATGTACCCCGGTGCGAT 61.619 55.000 0.00 0.00 33.40 4.58
3434 11362 0.756070 TCATGTACCCCGGTGCGATA 60.756 55.000 0.00 0.00 33.40 2.92
3435 11363 0.320374 CATGTACCCCGGTGCGATAT 59.680 55.000 0.00 0.00 33.40 1.63
3436 11364 0.606604 ATGTACCCCGGTGCGATATC 59.393 55.000 0.00 0.00 33.40 1.63
3437 11365 1.291272 GTACCCCGGTGCGATATCC 59.709 63.158 0.00 0.00 0.00 2.59
3438 11366 2.270257 TACCCCGGTGCGATATCCG 61.270 63.158 0.00 0.00 45.42 4.18
3439 11367 2.981914 TACCCCGGTGCGATATCCGT 62.982 60.000 0.00 0.00 44.51 4.69
3440 11368 2.049433 CCCGGTGCGATATCCGTC 60.049 66.667 0.00 0.00 44.51 4.79
3441 11369 2.725641 CCGGTGCGATATCCGTCA 59.274 61.111 0.00 0.00 44.51 4.35
3442 11370 1.660575 CCGGTGCGATATCCGTCAC 60.661 63.158 0.00 3.35 44.51 3.67
3445 11373 2.886859 GTGCGATATCCGTCACCTG 58.113 57.895 0.00 0.00 38.46 4.00
3446 11374 1.067416 TGCGATATCCGTCACCTGC 59.933 57.895 0.00 0.00 41.15 4.85
3447 11375 1.067416 GCGATATCCGTCACCTGCA 59.933 57.895 0.00 0.00 41.15 4.41
3448 11376 0.319900 GCGATATCCGTCACCTGCAT 60.320 55.000 0.00 0.00 41.15 3.96
3449 11377 1.422388 CGATATCCGTCACCTGCATG 58.578 55.000 0.00 0.00 0.00 4.06
3450 11378 1.151668 GATATCCGTCACCTGCATGC 58.848 55.000 11.82 11.82 0.00 4.06
3451 11379 0.601046 ATATCCGTCACCTGCATGCG 60.601 55.000 14.09 7.87 0.00 4.73
3469 11397 2.351276 CCCGCAACTGTAGGGCTT 59.649 61.111 3.49 0.00 38.51 4.35
3470 11398 1.745489 CCCGCAACTGTAGGGCTTC 60.745 63.158 3.49 0.00 38.51 3.86
3471 11399 1.745489 CCGCAACTGTAGGGCTTCC 60.745 63.158 0.00 0.00 0.00 3.46
3472 11400 1.745489 CGCAACTGTAGGGCTTCCC 60.745 63.158 0.00 0.00 45.90 3.97
3481 11409 4.097361 GGGCTTCCCGACCACTCC 62.097 72.222 0.00 0.00 42.15 3.85
3482 11410 3.003763 GGCTTCCCGACCACTCCT 61.004 66.667 0.00 0.00 0.00 3.69
3483 11411 2.579738 GCTTCCCGACCACTCCTC 59.420 66.667 0.00 0.00 0.00 3.71
3484 11412 2.283529 GCTTCCCGACCACTCCTCA 61.284 63.158 0.00 0.00 0.00 3.86
3485 11413 1.893786 CTTCCCGACCACTCCTCAG 59.106 63.158 0.00 0.00 0.00 3.35
3486 11414 2.232298 CTTCCCGACCACTCCTCAGC 62.232 65.000 0.00 0.00 0.00 4.26
3487 11415 4.135153 CCCGACCACTCCTCAGCG 62.135 72.222 0.00 0.00 0.00 5.18
3488 11416 4.803426 CCGACCACTCCTCAGCGC 62.803 72.222 0.00 0.00 0.00 5.92
3489 11417 3.753434 CGACCACTCCTCAGCGCT 61.753 66.667 2.64 2.64 0.00 5.92
3490 11418 2.183046 GACCACTCCTCAGCGCTC 59.817 66.667 7.13 0.00 0.00 5.03
3491 11419 2.601666 ACCACTCCTCAGCGCTCA 60.602 61.111 7.13 0.00 0.00 4.26
3492 11420 2.125753 CCACTCCTCAGCGCTCAC 60.126 66.667 7.13 0.00 0.00 3.51
3493 11421 2.125753 CACTCCTCAGCGCTCACC 60.126 66.667 7.13 0.00 0.00 4.02
3494 11422 2.601666 ACTCCTCAGCGCTCACCA 60.602 61.111 7.13 0.00 0.00 4.17
3495 11423 1.986757 ACTCCTCAGCGCTCACCAT 60.987 57.895 7.13 0.00 0.00 3.55
3496 11424 1.227205 CTCCTCAGCGCTCACCATC 60.227 63.158 7.13 0.00 0.00 3.51
3497 11425 1.953231 CTCCTCAGCGCTCACCATCA 61.953 60.000 7.13 0.00 0.00 3.07
3498 11426 1.078918 CCTCAGCGCTCACCATCAA 60.079 57.895 7.13 0.00 0.00 2.57
3499 11427 1.364626 CCTCAGCGCTCACCATCAAC 61.365 60.000 7.13 0.00 0.00 3.18
3500 11428 1.690283 CTCAGCGCTCACCATCAACG 61.690 60.000 7.13 0.00 0.00 4.10
3501 11429 1.737735 CAGCGCTCACCATCAACGA 60.738 57.895 7.13 0.00 0.00 3.85
3502 11430 1.446792 AGCGCTCACCATCAACGAG 60.447 57.895 2.64 0.00 0.00 4.18
3503 11431 1.446099 GCGCTCACCATCAACGAGA 60.446 57.895 0.00 0.00 0.00 4.04
3504 11432 1.014044 GCGCTCACCATCAACGAGAA 61.014 55.000 0.00 0.00 0.00 2.87
3505 11433 0.994995 CGCTCACCATCAACGAGAAG 59.005 55.000 0.00 0.00 0.00 2.85
3506 11434 1.363744 GCTCACCATCAACGAGAAGG 58.636 55.000 0.00 0.00 40.94 3.46
3507 11435 2.009042 GCTCACCATCAACGAGAAGGG 61.009 57.143 8.31 5.80 39.44 3.95
3508 11436 1.276421 CTCACCATCAACGAGAAGGGT 59.724 52.381 8.31 6.30 39.44 4.34
3509 11437 2.496070 CTCACCATCAACGAGAAGGGTA 59.504 50.000 8.31 0.00 39.44 3.69
3510 11438 2.901192 TCACCATCAACGAGAAGGGTAA 59.099 45.455 8.31 0.00 39.44 2.85
3511 11439 3.517901 TCACCATCAACGAGAAGGGTAAT 59.482 43.478 8.31 0.00 39.44 1.89
3512 11440 3.623060 CACCATCAACGAGAAGGGTAATG 59.377 47.826 8.31 0.00 39.44 1.90
3513 11441 3.263425 ACCATCAACGAGAAGGGTAATGT 59.737 43.478 8.31 0.00 39.44 2.71
3514 11442 3.871594 CCATCAACGAGAAGGGTAATGTC 59.128 47.826 0.00 0.00 31.39 3.06
3515 11443 3.226346 TCAACGAGAAGGGTAATGTCG 57.774 47.619 0.00 0.00 39.25 4.35
3516 11444 2.559668 TCAACGAGAAGGGTAATGTCGT 59.440 45.455 0.00 0.00 46.98 4.34
3517 11445 2.921754 CAACGAGAAGGGTAATGTCGTC 59.078 50.000 0.00 0.00 44.68 4.20
3518 11446 1.131883 ACGAGAAGGGTAATGTCGTCG 59.868 52.381 0.00 0.00 42.23 5.12
3519 11447 1.131883 CGAGAAGGGTAATGTCGTCGT 59.868 52.381 0.00 0.00 0.00 4.34
3520 11448 2.790468 CGAGAAGGGTAATGTCGTCGTC 60.790 54.545 0.00 0.00 0.00 4.20
3521 11449 2.422832 GAGAAGGGTAATGTCGTCGTCT 59.577 50.000 0.00 0.00 0.00 4.18
3522 11450 2.422832 AGAAGGGTAATGTCGTCGTCTC 59.577 50.000 0.00 0.00 0.00 3.36
3523 11451 2.125773 AGGGTAATGTCGTCGTCTCT 57.874 50.000 0.00 0.00 0.00 3.10
3524 11452 3.272574 AGGGTAATGTCGTCGTCTCTA 57.727 47.619 0.00 0.00 0.00 2.43
3525 11453 3.204526 AGGGTAATGTCGTCGTCTCTAG 58.795 50.000 0.00 0.00 0.00 2.43
3526 11454 3.118482 AGGGTAATGTCGTCGTCTCTAGA 60.118 47.826 0.00 0.00 0.00 2.43
3527 11455 3.248125 GGGTAATGTCGTCGTCTCTAGAG 59.752 52.174 13.98 13.98 0.00 2.43
3528 11456 4.118410 GGTAATGTCGTCGTCTCTAGAGA 58.882 47.826 18.76 18.76 34.56 3.10
3529 11457 4.209703 GGTAATGTCGTCGTCTCTAGAGAG 59.790 50.000 22.95 15.94 43.36 3.20
3538 11466 1.740297 TCTCTAGAGAGACACCGTGC 58.260 55.000 18.76 0.00 45.48 5.34
3578 11506 8.495260 AGTTAATTTCATTTTTGTACCCCCAAA 58.505 29.630 0.00 0.00 32.70 3.28
3583 11511 6.996180 TCATTTTTGTACCCCCAAATTACA 57.004 33.333 0.00 0.00 34.50 2.41
3589 11517 4.011023 TGTACCCCCAAATTACATGTTCG 58.989 43.478 2.30 0.00 0.00 3.95
3594 11522 2.514902 CCAAATTACATGTTCGTGGCG 58.485 47.619 2.30 0.00 0.00 5.69
3595 11523 2.514902 CAAATTACATGTTCGTGGCGG 58.485 47.619 2.30 0.00 0.00 6.13
3597 11525 1.651987 ATTACATGTTCGTGGCGGAG 58.348 50.000 2.30 0.00 0.00 4.63
3600 11528 0.821517 ACATGTTCGTGGCGGAGATA 59.178 50.000 0.00 0.00 0.00 1.98
3601 11529 1.412710 ACATGTTCGTGGCGGAGATAT 59.587 47.619 0.00 0.00 0.00 1.63
3602 11530 2.158957 ACATGTTCGTGGCGGAGATATT 60.159 45.455 0.00 0.00 0.00 1.28
3603 11531 3.069016 ACATGTTCGTGGCGGAGATATTA 59.931 43.478 0.00 0.00 0.00 0.98
3606 11534 2.798847 GTTCGTGGCGGAGATATTAACC 59.201 50.000 0.00 0.00 0.00 2.85
3607 11535 1.342174 TCGTGGCGGAGATATTAACCC 59.658 52.381 0.00 0.00 0.00 4.11
3609 11537 2.224209 CGTGGCGGAGATATTAACCCTT 60.224 50.000 0.00 0.00 0.00 3.95
3610 11538 3.400255 GTGGCGGAGATATTAACCCTTC 58.600 50.000 0.00 0.00 0.00 3.46
3658 11586 4.370917 CATTTAAGCAAACTTGTGCCACT 58.629 39.130 0.00 0.00 46.14 4.00
3661 11589 3.333029 AAGCAAACTTGTGCCACTTTT 57.667 38.095 0.00 0.00 46.14 2.27
3674 11602 1.608109 CCACTTTTTGCCCCATTTTGC 59.392 47.619 0.00 0.00 0.00 3.68
3685 11613 3.374988 GCCCCATTTTGCTTTTTATGCTC 59.625 43.478 0.00 0.00 0.00 4.26
3721 11649 6.879458 CCACATAGAAAGTTTAGTTAGCACCT 59.121 38.462 0.00 0.00 0.00 4.00
3723 11651 8.443937 CACATAGAAAGTTTAGTTAGCACCTTC 58.556 37.037 0.00 0.00 0.00 3.46
3725 11653 4.995487 AGAAAGTTTAGTTAGCACCTTCCG 59.005 41.667 0.00 0.00 0.00 4.30
3728 11656 4.313282 AGTTTAGTTAGCACCTTCCGTTC 58.687 43.478 0.00 0.00 0.00 3.95
3730 11658 4.612264 TTAGTTAGCACCTTCCGTTCTT 57.388 40.909 0.00 0.00 0.00 2.52
3737 11665 0.977395 ACCTTCCGTTCTTCTCCTGG 59.023 55.000 0.00 0.00 0.00 4.45
3747 11675 3.059352 TCTTCTCCTGGTTTGCTTAGC 57.941 47.619 0.00 0.00 0.00 3.09
3753 11681 1.815003 CCTGGTTTGCTTAGCTCTTGG 59.185 52.381 5.60 0.00 0.00 3.61
3754 11682 2.553028 CCTGGTTTGCTTAGCTCTTGGA 60.553 50.000 5.60 0.00 0.00 3.53
3755 11683 3.350833 CTGGTTTGCTTAGCTCTTGGAT 58.649 45.455 5.60 0.00 0.00 3.41
3756 11684 3.084039 TGGTTTGCTTAGCTCTTGGATG 58.916 45.455 5.60 0.00 0.00 3.51
3757 11685 3.244875 TGGTTTGCTTAGCTCTTGGATGA 60.245 43.478 5.60 0.00 0.00 2.92
3758 11686 3.950395 GGTTTGCTTAGCTCTTGGATGAT 59.050 43.478 5.60 0.00 0.00 2.45
3759 11687 4.036144 GGTTTGCTTAGCTCTTGGATGATC 59.964 45.833 5.60 0.00 0.00 2.92
3760 11688 4.767578 TTGCTTAGCTCTTGGATGATCT 57.232 40.909 5.60 0.00 0.00 2.75
3761 11689 5.876651 TTGCTTAGCTCTTGGATGATCTA 57.123 39.130 5.60 0.00 0.00 1.98
3762 11690 5.876651 TGCTTAGCTCTTGGATGATCTAA 57.123 39.130 5.60 0.00 0.00 2.10
3763 11691 5.605534 TGCTTAGCTCTTGGATGATCTAAC 58.394 41.667 5.60 0.00 0.00 2.34
3764 11692 4.994217 GCTTAGCTCTTGGATGATCTAACC 59.006 45.833 0.00 0.00 0.00 2.85
3765 11693 3.742433 AGCTCTTGGATGATCTAACCG 57.258 47.619 0.00 0.00 0.00 4.44
3766 11694 2.366916 AGCTCTTGGATGATCTAACCGG 59.633 50.000 0.00 0.00 0.00 5.28
3767 11695 2.760374 CTCTTGGATGATCTAACCGGC 58.240 52.381 0.00 0.00 0.00 6.13
3768 11696 2.103094 CTCTTGGATGATCTAACCGGCA 59.897 50.000 0.00 0.00 0.00 5.69
3772 11700 1.160137 GATGATCTAACCGGCATGGC 58.840 55.000 9.69 9.69 43.94 4.40
3803 11731 4.594854 ACCGCACCATGCACCCAA 62.595 61.111 1.20 0.00 45.36 4.12
3804 11732 4.054825 CCGCACCATGCACCCAAC 62.055 66.667 1.20 0.00 45.36 3.77
3808 11736 1.228521 CACCATGCACCCAACTCCA 60.229 57.895 0.00 0.00 0.00 3.86
3809 11737 0.612732 CACCATGCACCCAACTCCAT 60.613 55.000 0.00 0.00 0.00 3.41
3810 11738 0.612732 ACCATGCACCCAACTCCATG 60.613 55.000 0.00 0.00 35.90 3.66
3824 11752 2.200067 CTCCATGTTCACTCGCTCATC 58.800 52.381 0.00 0.00 0.00 2.92
3828 11756 2.084610 TGTTCACTCGCTCATCCAAG 57.915 50.000 0.00 0.00 0.00 3.61
3831 11759 0.108472 TCACTCGCTCATCCAAGCAG 60.108 55.000 0.00 0.00 42.62 4.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
59 60 1.670295 TGCCGAATCCAATCATTCACG 59.330 47.619 0.00 0.00 32.99 4.35
101 102 3.541711 GTCCGAAAAAGAACATCACACG 58.458 45.455 0.00 0.00 0.00 4.49
142 143 2.570386 AGCCCTGTATAACCCAGACT 57.430 50.000 0.00 0.00 31.38 3.24
159 160 2.420687 CCAGATCCAAACCCTGTCTAGC 60.421 54.545 0.00 0.00 0.00 3.42
170 171 2.045045 CCGCAGCCCAGATCCAAA 60.045 61.111 0.00 0.00 0.00 3.28
210 211 2.964343 GGGTATTTTTGTCCCCGCA 58.036 52.632 0.00 0.00 35.52 5.69
492 493 2.550606 GCAATTAACCTTGGTGTGACGA 59.449 45.455 0.00 0.00 0.00 4.20
576 577 4.158949 AGTGCCGGTTCAAAACTAAAACTT 59.841 37.500 1.90 0.00 0.00 2.66
769 839 5.353394 ACAACAACTAACCAGAGACAGAA 57.647 39.130 0.00 0.00 0.00 3.02
863 934 4.892934 AGAGAGAGAGAGAGAGAGAGAGAC 59.107 50.000 0.00 0.00 0.00 3.36
946 1415 9.638239 GGCTAACAAAAATGAGTTGATTGATTA 57.362 29.630 0.00 0.00 0.00 1.75
982 1451 1.089920 ATAGGCAGCGCTCAACTTTG 58.910 50.000 7.13 0.00 0.00 2.77
998 1467 4.080186 TCCCATCCATGTCCATATGCATAG 60.080 45.833 12.79 4.59 0.00 2.23
1121 1590 8.250143 AGTAATTGGTGATCTTTTTCCTTTGT 57.750 30.769 0.00 0.00 0.00 2.83
1516 1985 1.007842 TCCTGGTAGCCATGTCCACTA 59.992 52.381 0.00 0.00 30.82 2.74
1517 1986 0.252696 TCCTGGTAGCCATGTCCACT 60.253 55.000 0.00 0.00 30.82 4.00
1565 2034 1.449601 CAACCTCGCCGGCTGTATT 60.450 57.895 26.68 10.99 35.61 1.89
1821 2758 2.420022 CCCATTTCGCAAAGTAGTCCTG 59.580 50.000 0.00 0.00 0.00 3.86
2051 2988 1.040339 TTTTTCCCAGCCTTGCACGT 61.040 50.000 0.00 0.00 0.00 4.49
2067 3004 9.152327 TGATCTGACTATCTCATGGAGTATTTT 57.848 33.333 0.00 0.00 0.00 1.82
2168 3105 3.378427 GGCCATCACTGTATTTTGAGTCC 59.622 47.826 0.00 0.00 0.00 3.85
2204 3141 1.070275 TAGCCCGACGATCTCGCTA 59.930 57.895 0.00 0.00 44.43 4.26
2243 3180 4.687215 GAGCTCGTGTGCTGCCCA 62.687 66.667 0.00 0.00 44.17 5.36
2322 3259 5.893897 ATGATTTTCTTCTGCTCTTCCAC 57.106 39.130 0.00 0.00 0.00 4.02
2347 3284 3.683340 GTCTATGGGTTCTCCGTTTTGTC 59.317 47.826 0.00 0.00 38.76 3.18
2348 3285 3.326880 AGTCTATGGGTTCTCCGTTTTGT 59.673 43.478 0.00 0.00 38.76 2.83
2354 3291 2.361438 GGTGTAGTCTATGGGTTCTCCG 59.639 54.545 0.00 0.00 38.76 4.63
2382 3319 2.017049 ACGCAAGGTATCCATCTTTGC 58.983 47.619 0.00 0.00 41.96 3.68
2408 3345 1.093159 GCCTCAGTGCCTCTTTGATG 58.907 55.000 0.00 0.00 0.00 3.07
2429 3366 3.802948 AGTATTGGCGTTGGAGAGTAG 57.197 47.619 0.00 0.00 0.00 2.57
2432 3369 3.491104 GGAGTAGTATTGGCGTTGGAGAG 60.491 52.174 0.00 0.00 0.00 3.20
2438 3375 1.820519 TGTCGGAGTAGTATTGGCGTT 59.179 47.619 0.00 0.00 0.00 4.84
2445 3382 2.758423 TGTGTGCATGTCGGAGTAGTAT 59.242 45.455 0.00 0.00 0.00 2.12
2456 3393 1.605710 GTGAAGCTCTTGTGTGCATGT 59.394 47.619 0.00 0.00 35.37 3.21
2484 3421 3.054139 TCATATTCCATGCCATCCCTAGC 60.054 47.826 0.00 0.00 0.00 3.42
2486 3423 4.437967 TCTCATATTCCATGCCATCCCTA 58.562 43.478 0.00 0.00 0.00 3.53
2520 3457 1.755179 ATGGAGCACGCTAAAGCATT 58.245 45.000 2.44 0.00 42.21 3.56
2580 3517 2.079158 CCGGCATGGATCATACACATC 58.921 52.381 0.00 0.00 42.00 3.06
2605 3542 4.548513 CCTCCTCTCTCCCCGGGG 62.549 77.778 35.80 35.80 0.00 5.73
2626 3563 1.577922 GAAAACTTCCCGCCGGTTC 59.422 57.895 1.90 0.00 0.00 3.62
2636 3573 6.801862 CACCAAAAGATATGTCCGAAAACTTC 59.198 38.462 0.00 0.00 0.00 3.01
2730 3667 4.156455 ACTCAAGCTCAAAGTTCCTCAA 57.844 40.909 0.00 0.00 0.00 3.02
2793 3730 1.304464 CTTTTCCCCTGGGTCCTGC 60.304 63.158 12.71 0.00 36.47 4.85
2843 3780 1.086696 ACGTGCATGCGAGCTAATTT 58.913 45.000 14.09 0.00 35.59 1.82
2851 3788 1.989864 CACTAGTTTACGTGCATGCGA 59.010 47.619 14.09 0.00 35.59 5.10
2869 3806 7.478520 ACACACAGTTAGATTACAAACTCAC 57.521 36.000 0.00 0.00 33.72 3.51
2896 3833 4.513442 ACCAGCGTATAACAATGACACAT 58.487 39.130 0.00 0.00 0.00 3.21
2990 3928 1.295101 CACACCCACGCTGATGGTA 59.705 57.895 0.00 0.00 38.16 3.25
3094 11022 9.421806 CCAAACACACACACATCATAAAATAAT 57.578 29.630 0.00 0.00 0.00 1.28
3104 11032 0.673437 CCCCCAAACACACACACATC 59.327 55.000 0.00 0.00 0.00 3.06
3105 11033 2.819477 CCCCCAAACACACACACAT 58.181 52.632 0.00 0.00 0.00 3.21
3106 11034 4.346049 CCCCCAAACACACACACA 57.654 55.556 0.00 0.00 0.00 3.72
3135 11063 1.921869 ATTGGTAAGCCCACCCGAGG 61.922 60.000 2.04 0.00 45.19 4.63
3136 11064 0.034477 AATTGGTAAGCCCACCCGAG 60.034 55.000 2.04 0.00 45.19 4.63
3137 11065 0.322997 CAATTGGTAAGCCCACCCGA 60.323 55.000 0.00 0.00 45.19 5.14
3138 11066 0.610785 ACAATTGGTAAGCCCACCCG 60.611 55.000 10.83 0.00 45.19 5.28
3139 11067 1.182667 GACAATTGGTAAGCCCACCC 58.817 55.000 10.83 0.00 45.19 4.61
3140 11068 1.544246 GTGACAATTGGTAAGCCCACC 59.456 52.381 10.83 0.00 45.19 4.61
3141 11069 1.544246 GGTGACAATTGGTAAGCCCAC 59.456 52.381 10.83 5.86 45.19 4.61
3142 11070 1.884497 CGGTGACAATTGGTAAGCCCA 60.884 52.381 10.83 0.00 43.27 5.36
3143 11071 0.808755 CGGTGACAATTGGTAAGCCC 59.191 55.000 10.83 0.10 0.00 5.19
3144 11072 0.808755 CCGGTGACAATTGGTAAGCC 59.191 55.000 10.83 3.86 0.00 4.35
3145 11073 1.199097 CACCGGTGACAATTGGTAAGC 59.801 52.381 31.31 3.62 32.29 3.09
3146 11074 2.773487 TCACCGGTGACAATTGGTAAG 58.227 47.619 33.23 2.97 34.14 2.34
3147 11075 2.932855 TCACCGGTGACAATTGGTAA 57.067 45.000 33.23 7.23 34.14 2.85
3148 11076 3.516300 ACTATCACCGGTGACAATTGGTA 59.484 43.478 38.46 22.97 43.11 3.25
3149 11077 2.304761 ACTATCACCGGTGACAATTGGT 59.695 45.455 38.46 26.41 43.11 3.67
3150 11078 2.936498 GACTATCACCGGTGACAATTGG 59.064 50.000 38.46 25.75 43.11 3.16
3151 11079 3.861840 AGACTATCACCGGTGACAATTG 58.138 45.455 38.46 24.76 43.11 2.32
3152 11080 4.439700 CGTAGACTATCACCGGTGACAATT 60.440 45.833 38.46 24.95 43.11 2.32
3153 11081 3.066342 CGTAGACTATCACCGGTGACAAT 59.934 47.826 38.46 25.32 43.11 2.71
3154 11082 2.421073 CGTAGACTATCACCGGTGACAA 59.579 50.000 38.46 27.04 43.11 3.18
3155 11083 2.011947 CGTAGACTATCACCGGTGACA 58.988 52.381 38.46 27.91 43.11 3.58
3156 11084 2.012673 ACGTAGACTATCACCGGTGAC 58.987 52.381 38.46 25.20 43.11 3.67
3157 11085 2.408271 ACGTAGACTATCACCGGTGA 57.592 50.000 37.79 37.79 44.59 4.02
3158 11086 3.176708 CAAACGTAGACTATCACCGGTG 58.823 50.000 29.26 29.26 0.00 4.94
3159 11087 2.821969 ACAAACGTAGACTATCACCGGT 59.178 45.455 0.00 0.00 0.00 5.28
3160 11088 3.498927 ACAAACGTAGACTATCACCGG 57.501 47.619 0.00 0.00 0.00 5.28
3161 11089 3.611113 CCAACAAACGTAGACTATCACCG 59.389 47.826 0.00 0.00 0.00 4.94
3162 11090 4.563061 ACCAACAAACGTAGACTATCACC 58.437 43.478 0.00 0.00 0.00 4.02
3163 11091 5.693104 TCAACCAACAAACGTAGACTATCAC 59.307 40.000 0.00 0.00 0.00 3.06
3164 11092 5.693104 GTCAACCAACAAACGTAGACTATCA 59.307 40.000 0.00 0.00 0.00 2.15
3165 11093 5.924825 AGTCAACCAACAAACGTAGACTATC 59.075 40.000 0.00 0.00 33.72 2.08
3166 11094 5.694910 CAGTCAACCAACAAACGTAGACTAT 59.305 40.000 0.00 0.00 33.72 2.12
3167 11095 5.045215 CAGTCAACCAACAAACGTAGACTA 58.955 41.667 0.00 0.00 33.72 2.59
3168 11096 3.869246 CAGTCAACCAACAAACGTAGACT 59.131 43.478 0.00 0.00 35.66 3.24
3169 11097 3.866910 TCAGTCAACCAACAAACGTAGAC 59.133 43.478 0.00 0.00 0.00 2.59
3170 11098 4.116961 CTCAGTCAACCAACAAACGTAGA 58.883 43.478 0.00 0.00 0.00 2.59
3171 11099 3.869246 ACTCAGTCAACCAACAAACGTAG 59.131 43.478 0.00 0.00 0.00 3.51
3172 11100 3.864243 ACTCAGTCAACCAACAAACGTA 58.136 40.909 0.00 0.00 0.00 3.57
3173 11101 2.706890 ACTCAGTCAACCAACAAACGT 58.293 42.857 0.00 0.00 0.00 3.99
3174 11102 3.757745 AACTCAGTCAACCAACAAACG 57.242 42.857 0.00 0.00 0.00 3.60
3175 11103 4.173256 CCAAACTCAGTCAACCAACAAAC 58.827 43.478 0.00 0.00 0.00 2.93
3176 11104 3.367910 GCCAAACTCAGTCAACCAACAAA 60.368 43.478 0.00 0.00 0.00 2.83
3177 11105 2.165437 GCCAAACTCAGTCAACCAACAA 59.835 45.455 0.00 0.00 0.00 2.83
3178 11106 1.748493 GCCAAACTCAGTCAACCAACA 59.252 47.619 0.00 0.00 0.00 3.33
3179 11107 1.067060 GGCCAAACTCAGTCAACCAAC 59.933 52.381 0.00 0.00 0.00 3.77
3180 11108 1.398692 GGCCAAACTCAGTCAACCAA 58.601 50.000 0.00 0.00 0.00 3.67
3181 11109 0.817634 CGGCCAAACTCAGTCAACCA 60.818 55.000 2.24 0.00 0.00 3.67
3182 11110 1.515521 CCGGCCAAACTCAGTCAACC 61.516 60.000 2.24 0.00 0.00 3.77
3183 11111 0.818040 ACCGGCCAAACTCAGTCAAC 60.818 55.000 0.00 0.00 0.00 3.18
3184 11112 0.534203 GACCGGCCAAACTCAGTCAA 60.534 55.000 0.00 0.00 0.00 3.18
3185 11113 1.070786 GACCGGCCAAACTCAGTCA 59.929 57.895 0.00 0.00 0.00 3.41
3186 11114 2.027625 CGACCGGCCAAACTCAGTC 61.028 63.158 0.00 0.00 0.00 3.51
3187 11115 2.030562 CGACCGGCCAAACTCAGT 59.969 61.111 0.00 0.00 0.00 3.41
3188 11116 2.742372 CCGACCGGCCAAACTCAG 60.742 66.667 0.00 0.00 0.00 3.35
3199 11127 3.719144 GAAAACCACCGCCGACCG 61.719 66.667 0.00 0.00 0.00 4.79
3200 11128 2.592287 TGAAAACCACCGCCGACC 60.592 61.111 0.00 0.00 0.00 4.79
3201 11129 1.512156 ATGTGAAAACCACCGCCGAC 61.512 55.000 0.00 0.00 45.09 4.79
3202 11130 0.820074 AATGTGAAAACCACCGCCGA 60.820 50.000 0.00 0.00 45.09 5.54
3203 11131 0.031449 AAATGTGAAAACCACCGCCG 59.969 50.000 0.00 0.00 45.09 6.46
3204 11132 1.202475 ACAAATGTGAAAACCACCGCC 60.202 47.619 0.00 0.00 45.09 6.13
3205 11133 2.124122 GACAAATGTGAAAACCACCGC 58.876 47.619 0.00 0.00 45.09 5.68
3206 11134 3.315191 AGAGACAAATGTGAAAACCACCG 59.685 43.478 0.00 0.00 45.09 4.94
3207 11135 4.580580 AGAGAGACAAATGTGAAAACCACC 59.419 41.667 0.00 0.00 45.09 4.61
3208 11136 5.278022 GGAGAGAGACAAATGTGAAAACCAC 60.278 44.000 0.00 0.00 45.88 4.16
3209 11137 4.821805 GGAGAGAGACAAATGTGAAAACCA 59.178 41.667 0.00 0.00 0.00 3.67
3210 11138 4.083802 CGGAGAGAGACAAATGTGAAAACC 60.084 45.833 0.00 0.00 0.00 3.27
3211 11139 4.083802 CCGGAGAGAGACAAATGTGAAAAC 60.084 45.833 0.00 0.00 0.00 2.43
3212 11140 4.065088 CCGGAGAGAGACAAATGTGAAAA 58.935 43.478 0.00 0.00 0.00 2.29
3213 11141 3.323691 TCCGGAGAGAGACAAATGTGAAA 59.676 43.478 0.00 0.00 0.00 2.69
3214 11142 2.897326 TCCGGAGAGAGACAAATGTGAA 59.103 45.455 0.00 0.00 0.00 3.18
3215 11143 2.525368 TCCGGAGAGAGACAAATGTGA 58.475 47.619 0.00 0.00 0.00 3.58
3216 11144 3.257393 CTTCCGGAGAGAGACAAATGTG 58.743 50.000 3.34 0.00 0.00 3.21
3217 11145 2.234908 CCTTCCGGAGAGAGACAAATGT 59.765 50.000 3.34 0.00 0.00 2.71
3218 11146 2.497675 TCCTTCCGGAGAGAGACAAATG 59.502 50.000 3.34 0.00 33.30 2.32
3219 11147 2.821437 TCCTTCCGGAGAGAGACAAAT 58.179 47.619 3.34 0.00 33.30 2.32
3220 11148 2.304221 TCCTTCCGGAGAGAGACAAA 57.696 50.000 3.34 0.00 33.30 2.83
3221 11149 2.379972 GATCCTTCCGGAGAGAGACAA 58.620 52.381 3.34 0.00 44.06 3.18
3222 11150 1.747552 CGATCCTTCCGGAGAGAGACA 60.748 57.143 3.34 0.00 44.06 3.41
3223 11151 0.948678 CGATCCTTCCGGAGAGAGAC 59.051 60.000 3.34 3.83 44.06 3.36
3224 11152 0.837940 TCGATCCTTCCGGAGAGAGA 59.162 55.000 3.34 0.28 44.06 3.10
3225 11153 1.234821 CTCGATCCTTCCGGAGAGAG 58.765 60.000 3.34 0.00 44.06 3.20
3226 11154 0.820074 GCTCGATCCTTCCGGAGAGA 60.820 60.000 17.71 13.09 44.06 3.10
3227 11155 1.657556 GCTCGATCCTTCCGGAGAG 59.342 63.158 3.34 8.07 44.06 3.20
3228 11156 1.828660 GGCTCGATCCTTCCGGAGA 60.829 63.158 3.34 0.00 44.06 3.71
3229 11157 1.676678 TTGGCTCGATCCTTCCGGAG 61.677 60.000 3.34 0.00 44.06 4.63
3230 11158 1.261938 TTTGGCTCGATCCTTCCGGA 61.262 55.000 0.00 0.00 45.16 5.14
3231 11159 0.811616 CTTTGGCTCGATCCTTCCGG 60.812 60.000 6.88 0.00 0.00 5.14
3232 11160 1.432270 GCTTTGGCTCGATCCTTCCG 61.432 60.000 6.88 0.00 35.22 4.30
3233 11161 0.392998 TGCTTTGGCTCGATCCTTCC 60.393 55.000 6.88 0.00 39.59 3.46
3234 11162 1.601430 GATGCTTTGGCTCGATCCTTC 59.399 52.381 6.88 0.00 39.59 3.46
3235 11163 1.211457 AGATGCTTTGGCTCGATCCTT 59.789 47.619 6.88 0.00 39.59 3.36
3236 11164 0.835941 AGATGCTTTGGCTCGATCCT 59.164 50.000 6.88 0.00 39.59 3.24
3237 11165 0.942962 CAGATGCTTTGGCTCGATCC 59.057 55.000 0.00 0.00 39.59 3.36
3238 11166 0.307146 GCAGATGCTTTGGCTCGATC 59.693 55.000 0.00 0.00 39.59 3.69
3239 11167 1.099879 GGCAGATGCTTTGGCTCGAT 61.100 55.000 4.59 0.00 41.70 3.59
3240 11168 1.746615 GGCAGATGCTTTGGCTCGA 60.747 57.895 4.59 0.00 41.70 4.04
3241 11169 2.796651 GGCAGATGCTTTGGCTCG 59.203 61.111 4.59 0.00 41.70 5.03
3242 11170 2.796651 CGGCAGATGCTTTGGCTC 59.203 61.111 4.59 0.00 41.70 4.70
3243 11171 3.446570 GCGGCAGATGCTTTGGCT 61.447 61.111 4.59 0.00 41.70 4.75
3244 11172 4.503314 GGCGGCAGATGCTTTGGC 62.503 66.667 3.07 4.19 41.70 4.52
3245 11173 4.183686 CGGCGGCAGATGCTTTGG 62.184 66.667 10.53 0.00 41.70 3.28
3246 11174 4.842091 GCGGCGGCAGATGCTTTG 62.842 66.667 9.78 0.00 41.70 2.77
3251 11179 3.869272 GTGAAGCGGCGGCAGATG 61.869 66.667 19.21 0.00 43.41 2.90
3257 11185 1.024579 ATAAAGTGGTGAAGCGGCGG 61.025 55.000 9.78 0.00 0.00 6.13
3258 11186 0.373716 GATAAAGTGGTGAAGCGGCG 59.626 55.000 0.51 0.51 0.00 6.46
3259 11187 0.733150 GGATAAAGTGGTGAAGCGGC 59.267 55.000 0.00 0.00 0.00 6.53
3260 11188 1.379527 GGGATAAAGTGGTGAAGCGG 58.620 55.000 0.00 0.00 0.00 5.52
3261 11189 1.006832 CGGGATAAAGTGGTGAAGCG 58.993 55.000 0.00 0.00 0.00 4.68
3262 11190 2.093658 TCTCGGGATAAAGTGGTGAAGC 60.094 50.000 0.00 0.00 0.00 3.86
3263 11191 3.887621 TCTCGGGATAAAGTGGTGAAG 57.112 47.619 0.00 0.00 0.00 3.02
3264 11192 3.134081 GGATCTCGGGATAAAGTGGTGAA 59.866 47.826 0.00 0.00 31.46 3.18
3265 11193 2.698797 GGATCTCGGGATAAAGTGGTGA 59.301 50.000 0.00 0.00 31.46 4.02
3266 11194 2.434336 TGGATCTCGGGATAAAGTGGTG 59.566 50.000 0.00 0.00 31.46 4.17
3267 11195 2.700897 CTGGATCTCGGGATAAAGTGGT 59.299 50.000 0.00 0.00 31.46 4.16
3268 11196 2.548920 GCTGGATCTCGGGATAAAGTGG 60.549 54.545 0.00 0.00 31.46 4.00
3269 11197 2.760374 GCTGGATCTCGGGATAAAGTG 58.240 52.381 0.00 0.00 31.46 3.16
3270 11198 1.341531 CGCTGGATCTCGGGATAAAGT 59.658 52.381 0.00 0.00 31.46 2.66
3271 11199 1.613925 TCGCTGGATCTCGGGATAAAG 59.386 52.381 0.00 0.00 31.46 1.85
3272 11200 1.613925 CTCGCTGGATCTCGGGATAAA 59.386 52.381 0.00 0.00 31.46 1.40
3273 11201 1.248486 CTCGCTGGATCTCGGGATAA 58.752 55.000 0.00 0.00 31.46 1.75
3274 11202 0.110678 ACTCGCTGGATCTCGGGATA 59.889 55.000 0.00 0.00 31.46 2.59
3275 11203 1.152652 ACTCGCTGGATCTCGGGAT 60.153 57.895 0.00 0.00 34.45 3.85
3276 11204 1.824329 GACTCGCTGGATCTCGGGA 60.824 63.158 8.87 0.00 0.00 5.14
3277 11205 1.791103 GAGACTCGCTGGATCTCGGG 61.791 65.000 0.00 0.00 30.24 5.14
3278 11206 0.817634 AGAGACTCGCTGGATCTCGG 60.818 60.000 0.00 0.00 43.06 4.63
3279 11207 0.586319 GAGAGACTCGCTGGATCTCG 59.414 60.000 0.00 0.00 43.06 4.04
3280 11208 1.674359 TGAGAGACTCGCTGGATCTC 58.326 55.000 7.75 0.00 39.38 2.75
3281 11209 2.136298 TTGAGAGACTCGCTGGATCT 57.864 50.000 7.75 0.00 32.35 2.75
3282 11210 2.949451 TTTGAGAGACTCGCTGGATC 57.051 50.000 7.75 0.00 32.35 3.36
3283 11211 3.068873 GGTATTTGAGAGACTCGCTGGAT 59.931 47.826 7.75 2.18 32.35 3.41
3284 11212 2.427453 GGTATTTGAGAGACTCGCTGGA 59.573 50.000 7.75 0.00 32.35 3.86
3285 11213 2.482142 GGGTATTTGAGAGACTCGCTGG 60.482 54.545 7.75 0.00 32.35 4.85
3286 11214 2.166459 TGGGTATTTGAGAGACTCGCTG 59.834 50.000 7.75 0.00 32.35 5.18
3287 11215 2.166664 GTGGGTATTTGAGAGACTCGCT 59.833 50.000 7.75 0.00 32.35 4.93
3288 11216 2.541556 GTGGGTATTTGAGAGACTCGC 58.458 52.381 0.00 0.00 32.35 5.03
3289 11217 2.496070 TGGTGGGTATTTGAGAGACTCG 59.504 50.000 0.00 0.00 32.35 4.18
3290 11218 4.762289 ATGGTGGGTATTTGAGAGACTC 57.238 45.455 0.00 0.00 0.00 3.36
3291 11219 4.409247 GGTATGGTGGGTATTTGAGAGACT 59.591 45.833 0.00 0.00 0.00 3.24
3292 11220 4.444449 GGGTATGGTGGGTATTTGAGAGAC 60.444 50.000 0.00 0.00 0.00 3.36
3293 11221 3.714798 GGGTATGGTGGGTATTTGAGAGA 59.285 47.826 0.00 0.00 0.00 3.10
3294 11222 3.458118 TGGGTATGGTGGGTATTTGAGAG 59.542 47.826 0.00 0.00 0.00 3.20
3295 11223 3.201266 GTGGGTATGGTGGGTATTTGAGA 59.799 47.826 0.00 0.00 0.00 3.27
3296 11224 3.053991 TGTGGGTATGGTGGGTATTTGAG 60.054 47.826 0.00 0.00 0.00 3.02
3297 11225 2.920271 TGTGGGTATGGTGGGTATTTGA 59.080 45.455 0.00 0.00 0.00 2.69
3298 11226 3.374042 TGTGGGTATGGTGGGTATTTG 57.626 47.619 0.00 0.00 0.00 2.32
3299 11227 4.542697 GATTGTGGGTATGGTGGGTATTT 58.457 43.478 0.00 0.00 0.00 1.40
3300 11228 3.434453 CGATTGTGGGTATGGTGGGTATT 60.434 47.826 0.00 0.00 0.00 1.89
3301 11229 2.105821 CGATTGTGGGTATGGTGGGTAT 59.894 50.000 0.00 0.00 0.00 2.73
3302 11230 1.487142 CGATTGTGGGTATGGTGGGTA 59.513 52.381 0.00 0.00 0.00 3.69
3303 11231 0.254747 CGATTGTGGGTATGGTGGGT 59.745 55.000 0.00 0.00 0.00 4.51
3305 11233 2.014128 GAACGATTGTGGGTATGGTGG 58.986 52.381 0.00 0.00 0.00 4.61
3306 11234 2.014128 GGAACGATTGTGGGTATGGTG 58.986 52.381 0.00 0.00 0.00 4.17
3307 11235 1.913419 AGGAACGATTGTGGGTATGGT 59.087 47.619 0.00 0.00 0.00 3.55
3308 11236 2.561569 GAGGAACGATTGTGGGTATGG 58.438 52.381 0.00 0.00 0.00 2.74
3309 11237 2.561569 GGAGGAACGATTGTGGGTATG 58.438 52.381 0.00 0.00 0.00 2.39
3310 11238 1.489230 GGGAGGAACGATTGTGGGTAT 59.511 52.381 0.00 0.00 0.00 2.73
3311 11239 0.906775 GGGAGGAACGATTGTGGGTA 59.093 55.000 0.00 0.00 0.00 3.69
3312 11240 1.683441 GGGAGGAACGATTGTGGGT 59.317 57.895 0.00 0.00 0.00 4.51
3313 11241 1.449601 CGGGAGGAACGATTGTGGG 60.450 63.158 0.00 0.00 0.00 4.61
3314 11242 0.739813 GTCGGGAGGAACGATTGTGG 60.740 60.000 0.00 0.00 42.82 4.17
3315 11243 0.739813 GGTCGGGAGGAACGATTGTG 60.740 60.000 0.00 0.00 42.82 3.33
3316 11244 0.903454 AGGTCGGGAGGAACGATTGT 60.903 55.000 0.00 0.00 42.82 2.71
3317 11245 0.179108 GAGGTCGGGAGGAACGATTG 60.179 60.000 0.00 0.00 42.82 2.67
3318 11246 0.613853 TGAGGTCGGGAGGAACGATT 60.614 55.000 0.00 0.00 42.82 3.34
3319 11247 1.000019 TGAGGTCGGGAGGAACGAT 60.000 57.895 0.00 0.00 42.82 3.73
3321 11249 2.572284 GTGAGGTCGGGAGGAACG 59.428 66.667 0.00 0.00 37.47 3.95
3322 11250 2.979649 GGTGAGGTCGGGAGGAAC 59.020 66.667 0.00 0.00 0.00 3.62
3323 11251 2.678934 CGGTGAGGTCGGGAGGAA 60.679 66.667 0.00 0.00 0.00 3.36
3331 11259 4.008933 ACTGCTGGCGGTGAGGTC 62.009 66.667 6.23 0.00 33.73 3.85
3344 11272 1.458639 AAACTCCAGCAAGGCACTGC 61.459 55.000 3.59 3.59 40.86 4.40
3345 11273 0.595095 GAAACTCCAGCAAGGCACTG 59.405 55.000 0.00 0.00 40.86 3.66
3347 11275 0.823356 TGGAAACTCCAGCAAGGCAC 60.823 55.000 0.00 0.00 42.67 5.01
3348 11276 1.536180 TGGAAACTCCAGCAAGGCA 59.464 52.632 0.00 0.00 42.67 4.75
3349 11277 4.500265 TGGAAACTCCAGCAAGGC 57.500 55.556 0.00 0.00 42.67 4.35
3357 11285 1.450025 GGGACGACAATGGAAACTCC 58.550 55.000 0.00 0.00 36.96 3.85
3372 11300 3.950794 TTGCCTGATGCGACGGGAC 62.951 63.158 11.28 4.32 45.60 4.46
3373 11301 3.247056 TTTGCCTGATGCGACGGGA 62.247 57.895 11.28 0.00 45.60 5.14
3374 11302 2.745884 TTTGCCTGATGCGACGGG 60.746 61.111 0.00 3.79 45.60 5.28
3375 11303 0.739462 TAGTTTGCCTGATGCGACGG 60.739 55.000 0.00 0.00 45.60 4.79
3376 11304 0.370273 GTAGTTTGCCTGATGCGACG 59.630 55.000 0.00 0.00 45.60 5.12
3377 11305 1.128692 GTGTAGTTTGCCTGATGCGAC 59.871 52.381 0.00 0.00 45.60 5.19
3378 11306 1.438651 GTGTAGTTTGCCTGATGCGA 58.561 50.000 0.00 0.00 45.60 5.10
3379 11307 0.095245 CGTGTAGTTTGCCTGATGCG 59.905 55.000 0.00 0.00 45.60 4.73
3380 11308 1.156736 ACGTGTAGTTTGCCTGATGC 58.843 50.000 0.00 0.00 41.77 3.91
3381 11309 2.548057 ACAACGTGTAGTTTGCCTGATG 59.452 45.455 0.00 0.00 42.02 3.07
3382 11310 2.548057 CACAACGTGTAGTTTGCCTGAT 59.452 45.455 0.00 0.00 42.02 2.90
3383 11311 1.937223 CACAACGTGTAGTTTGCCTGA 59.063 47.619 0.00 0.00 42.02 3.86
3384 11312 1.002900 CCACAACGTGTAGTTTGCCTG 60.003 52.381 0.00 0.00 42.02 4.85
3385 11313 1.305201 CCACAACGTGTAGTTTGCCT 58.695 50.000 0.00 0.00 42.02 4.75
3386 11314 0.317519 GCCACAACGTGTAGTTTGCC 60.318 55.000 0.00 0.00 42.02 4.52
3387 11315 0.661020 AGCCACAACGTGTAGTTTGC 59.339 50.000 0.00 0.00 42.02 3.68
3388 11316 2.210116 AGAGCCACAACGTGTAGTTTG 58.790 47.619 0.00 0.00 42.02 2.93
3389 11317 2.480845 GAGAGCCACAACGTGTAGTTT 58.519 47.619 0.00 0.00 42.02 2.66
3390 11318 1.602165 CGAGAGCCACAACGTGTAGTT 60.602 52.381 0.00 0.00 45.45 2.24
3391 11319 0.039437 CGAGAGCCACAACGTGTAGT 60.039 55.000 0.00 0.00 0.00 2.73
3392 11320 0.732880 CCGAGAGCCACAACGTGTAG 60.733 60.000 0.00 0.00 0.00 2.74
3393 11321 1.287815 CCGAGAGCCACAACGTGTA 59.712 57.895 0.00 0.00 0.00 2.90
3394 11322 2.029073 CCGAGAGCCACAACGTGT 59.971 61.111 0.00 0.00 0.00 4.49
3395 11323 3.414700 GCCGAGAGCCACAACGTG 61.415 66.667 0.00 0.00 34.35 4.49
3398 11326 2.665185 AACGCCGAGAGCCACAAC 60.665 61.111 0.00 0.00 38.78 3.32
3399 11327 2.357034 GAACGCCGAGAGCCACAA 60.357 61.111 0.00 0.00 38.78 3.33
3400 11328 2.942796 ATGAACGCCGAGAGCCACA 61.943 57.895 0.00 0.00 38.78 4.17
3401 11329 2.125512 ATGAACGCCGAGAGCCAC 60.126 61.111 0.00 0.00 38.78 5.01
3402 11330 1.600511 TACATGAACGCCGAGAGCCA 61.601 55.000 0.00 0.00 38.78 4.75
3403 11331 1.141019 TACATGAACGCCGAGAGCC 59.859 57.895 0.00 0.00 38.78 4.70
3404 11332 1.146358 GGTACATGAACGCCGAGAGC 61.146 60.000 0.00 0.00 38.52 4.09
3405 11333 0.527817 GGGTACATGAACGCCGAGAG 60.528 60.000 0.00 0.00 0.00 3.20
3406 11334 1.514087 GGGTACATGAACGCCGAGA 59.486 57.895 0.00 0.00 0.00 4.04
3407 11335 1.520787 GGGGTACATGAACGCCGAG 60.521 63.158 0.00 0.00 41.90 4.63
3408 11336 2.580276 GGGGTACATGAACGCCGA 59.420 61.111 0.00 0.00 41.90 5.54
3410 11338 2.512974 CCGGGGTACATGAACGCC 60.513 66.667 0.00 0.30 46.26 5.68
3411 11339 2.104253 CACCGGGGTACATGAACGC 61.104 63.158 6.32 0.00 0.00 4.84
3412 11340 2.104253 GCACCGGGGTACATGAACG 61.104 63.158 5.12 0.00 0.00 3.95
3413 11341 2.104253 CGCACCGGGGTACATGAAC 61.104 63.158 5.12 0.00 0.00 3.18
3414 11342 1.618876 ATCGCACCGGGGTACATGAA 61.619 55.000 5.12 0.00 0.00 2.57
3415 11343 0.756070 TATCGCACCGGGGTACATGA 60.756 55.000 5.12 0.00 0.00 3.07
3416 11344 0.320374 ATATCGCACCGGGGTACATG 59.680 55.000 5.12 0.00 0.00 3.21
3417 11345 0.606604 GATATCGCACCGGGGTACAT 59.393 55.000 5.12 0.00 0.00 2.29
3418 11346 1.466025 GGATATCGCACCGGGGTACA 61.466 60.000 5.12 0.00 0.00 2.90
3419 11347 1.291272 GGATATCGCACCGGGGTAC 59.709 63.158 5.12 0.00 0.00 3.34
3420 11348 2.270257 CGGATATCGCACCGGGGTA 61.270 63.158 5.12 0.00 44.59 3.69
3421 11349 3.612681 CGGATATCGCACCGGGGT 61.613 66.667 5.12 0.00 44.59 4.95
3427 11355 1.215655 GCAGGTGACGGATATCGCAC 61.216 60.000 11.41 11.41 43.89 5.34
3428 11356 1.067416 GCAGGTGACGGATATCGCA 59.933 57.895 0.00 0.00 43.89 5.10
3429 11357 0.319900 ATGCAGGTGACGGATATCGC 60.320 55.000 0.00 0.00 43.89 4.58
3430 11358 1.422388 CATGCAGGTGACGGATATCG 58.578 55.000 0.00 0.00 45.88 2.92
3431 11359 1.151668 GCATGCAGGTGACGGATATC 58.848 55.000 14.21 0.00 0.00 1.63
3432 11360 0.601046 CGCATGCAGGTGACGGATAT 60.601 55.000 19.57 0.00 0.00 1.63
3433 11361 1.227234 CGCATGCAGGTGACGGATA 60.227 57.895 19.57 0.00 0.00 2.59
3434 11362 2.512286 CGCATGCAGGTGACGGAT 60.512 61.111 19.57 0.00 0.00 4.18
3452 11380 1.745489 GAAGCCCTACAGTTGCGGG 60.745 63.158 3.42 3.42 41.06 6.13
3453 11381 1.745489 GGAAGCCCTACAGTTGCGG 60.745 63.158 0.00 0.00 0.00 5.69
3454 11382 1.745489 GGGAAGCCCTACAGTTGCG 60.745 63.158 0.00 0.00 41.34 4.85
3455 11383 1.745489 CGGGAAGCCCTACAGTTGC 60.745 63.158 0.38 0.00 42.67 4.17
3456 11384 0.391263 GTCGGGAAGCCCTACAGTTG 60.391 60.000 2.57 0.00 42.67 3.16
3457 11385 1.551019 GGTCGGGAAGCCCTACAGTT 61.551 60.000 9.09 0.00 40.64 3.16
3458 11386 1.988406 GGTCGGGAAGCCCTACAGT 60.988 63.158 9.09 0.00 40.64 3.55
3459 11387 1.987855 TGGTCGGGAAGCCCTACAG 60.988 63.158 9.09 0.00 40.64 2.74
3460 11388 2.120940 TGGTCGGGAAGCCCTACA 59.879 61.111 9.09 0.00 40.64 2.74
3461 11389 1.957765 GAGTGGTCGGGAAGCCCTAC 61.958 65.000 0.38 0.00 42.67 3.18
3462 11390 1.684734 GAGTGGTCGGGAAGCCCTA 60.685 63.158 0.38 0.00 42.67 3.53
3463 11391 3.003763 GAGTGGTCGGGAAGCCCT 61.004 66.667 0.38 0.00 42.67 5.19
3464 11392 4.097361 GGAGTGGTCGGGAAGCCC 62.097 72.222 0.00 0.00 41.09 5.19
3465 11393 3.003763 AGGAGTGGTCGGGAAGCC 61.004 66.667 0.00 0.00 0.00 4.35
3466 11394 2.232298 CTGAGGAGTGGTCGGGAAGC 62.232 65.000 0.00 0.00 0.00 3.86
3467 11395 1.893786 CTGAGGAGTGGTCGGGAAG 59.106 63.158 0.00 0.00 0.00 3.46
3468 11396 2.283529 GCTGAGGAGTGGTCGGGAA 61.284 63.158 0.00 0.00 0.00 3.97
3469 11397 2.680352 GCTGAGGAGTGGTCGGGA 60.680 66.667 0.00 0.00 0.00 5.14
3470 11398 4.135153 CGCTGAGGAGTGGTCGGG 62.135 72.222 0.00 0.00 0.00 5.14
3471 11399 4.803426 GCGCTGAGGAGTGGTCGG 62.803 72.222 0.00 0.00 0.00 4.79
3472 11400 3.691744 GAGCGCTGAGGAGTGGTCG 62.692 68.421 18.48 0.00 44.78 4.79
3473 11401 2.183046 GAGCGCTGAGGAGTGGTC 59.817 66.667 18.48 0.00 46.73 4.02
3474 11402 2.601666 TGAGCGCTGAGGAGTGGT 60.602 61.111 18.48 0.00 43.12 4.16
3475 11403 2.125753 GTGAGCGCTGAGGAGTGG 60.126 66.667 18.48 0.00 0.00 4.00
3476 11404 2.125753 GGTGAGCGCTGAGGAGTG 60.126 66.667 18.48 0.00 0.00 3.51
3477 11405 1.954362 GATGGTGAGCGCTGAGGAGT 61.954 60.000 18.48 0.00 0.00 3.85
3478 11406 1.227205 GATGGTGAGCGCTGAGGAG 60.227 63.158 18.48 0.00 0.00 3.69
3479 11407 1.543944 TTGATGGTGAGCGCTGAGGA 61.544 55.000 18.48 0.00 0.00 3.71
3480 11408 1.078918 TTGATGGTGAGCGCTGAGG 60.079 57.895 18.48 0.00 0.00 3.86
3481 11409 1.690283 CGTTGATGGTGAGCGCTGAG 61.690 60.000 18.48 0.00 0.00 3.35
3482 11410 1.737735 CGTTGATGGTGAGCGCTGA 60.738 57.895 18.48 1.75 0.00 4.26
3483 11411 1.690283 CTCGTTGATGGTGAGCGCTG 61.690 60.000 18.48 0.00 0.00 5.18
3484 11412 1.446792 CTCGTTGATGGTGAGCGCT 60.447 57.895 11.27 11.27 0.00 5.92
3485 11413 1.014044 TTCTCGTTGATGGTGAGCGC 61.014 55.000 0.00 0.00 0.00 5.92
3486 11414 0.994995 CTTCTCGTTGATGGTGAGCG 59.005 55.000 0.00 0.00 0.00 5.03
3487 11415 1.363744 CCTTCTCGTTGATGGTGAGC 58.636 55.000 5.44 0.00 35.82 4.26
3488 11416 1.276421 ACCCTTCTCGTTGATGGTGAG 59.724 52.381 10.35 0.00 38.06 3.51
3489 11417 1.348064 ACCCTTCTCGTTGATGGTGA 58.652 50.000 10.35 0.00 38.06 4.02
3490 11418 3.328382 TTACCCTTCTCGTTGATGGTG 57.672 47.619 10.35 6.36 38.06 4.17
3491 11419 3.263425 ACATTACCCTTCTCGTTGATGGT 59.737 43.478 10.35 0.00 38.06 3.55
3492 11420 3.871594 GACATTACCCTTCTCGTTGATGG 59.128 47.826 6.27 6.27 39.09 3.51
3493 11421 3.551890 CGACATTACCCTTCTCGTTGATG 59.448 47.826 0.00 0.00 0.00 3.07
3494 11422 3.194968 ACGACATTACCCTTCTCGTTGAT 59.805 43.478 0.00 0.00 33.96 2.57
3495 11423 2.559668 ACGACATTACCCTTCTCGTTGA 59.440 45.455 0.00 0.00 33.96 3.18
3496 11424 2.921754 GACGACATTACCCTTCTCGTTG 59.078 50.000 0.00 0.00 37.69 4.10
3497 11425 2.415090 CGACGACATTACCCTTCTCGTT 60.415 50.000 0.00 0.00 37.69 3.85
3498 11426 1.131883 CGACGACATTACCCTTCTCGT 59.868 52.381 0.00 0.00 40.17 4.18
3499 11427 1.131883 ACGACGACATTACCCTTCTCG 59.868 52.381 0.00 0.00 0.00 4.04
3500 11428 2.422832 AGACGACGACATTACCCTTCTC 59.577 50.000 0.00 0.00 0.00 2.87
3501 11429 2.422832 GAGACGACGACATTACCCTTCT 59.577 50.000 0.00 0.00 0.00 2.85
3502 11430 2.422832 AGAGACGACGACATTACCCTTC 59.577 50.000 0.00 0.00 0.00 3.46
3503 11431 2.444421 AGAGACGACGACATTACCCTT 58.556 47.619 0.00 0.00 0.00 3.95
3504 11432 2.125773 AGAGACGACGACATTACCCT 57.874 50.000 0.00 0.00 0.00 4.34
3505 11433 3.201290 TCTAGAGACGACGACATTACCC 58.799 50.000 0.00 0.00 0.00 3.69
3506 11434 4.118410 TCTCTAGAGACGACGACATTACC 58.882 47.826 18.76 0.00 31.41 2.85
3507 11435 5.042593 TCTCTCTAGAGACGACGACATTAC 58.957 45.833 18.76 0.00 45.48 1.89
3508 11436 5.259832 TCTCTCTAGAGACGACGACATTA 57.740 43.478 18.76 0.00 45.48 1.90
3509 11437 4.126208 TCTCTCTAGAGACGACGACATT 57.874 45.455 18.76 0.00 45.48 2.71
3510 11438 3.804786 TCTCTCTAGAGACGACGACAT 57.195 47.619 18.76 0.00 45.48 3.06
3520 11448 0.375454 CGCACGGTGTCTCTCTAGAG 59.625 60.000 13.98 13.98 43.36 2.43
3521 11449 0.321387 ACGCACGGTGTCTCTCTAGA 60.321 55.000 10.24 0.00 0.00 2.43
3522 11450 1.366679 TACGCACGGTGTCTCTCTAG 58.633 55.000 10.24 0.00 0.00 2.43
3523 11451 2.034104 ATACGCACGGTGTCTCTCTA 57.966 50.000 10.24 0.00 0.00 2.43
3524 11452 2.034104 TATACGCACGGTGTCTCTCT 57.966 50.000 10.24 0.00 0.00 3.10
3525 11453 2.838386 TTATACGCACGGTGTCTCTC 57.162 50.000 10.24 0.00 0.00 3.20
3526 11454 3.581024 TTTTATACGCACGGTGTCTCT 57.419 42.857 10.24 0.00 0.00 3.10
3527 11455 3.861113 TGATTTTATACGCACGGTGTCTC 59.139 43.478 10.24 0.00 0.00 3.36
3528 11456 3.852286 TGATTTTATACGCACGGTGTCT 58.148 40.909 10.24 0.00 0.00 3.41
3529 11457 4.327898 TCTTGATTTTATACGCACGGTGTC 59.672 41.667 10.24 1.40 0.00 3.67
3530 11458 4.247258 TCTTGATTTTATACGCACGGTGT 58.753 39.130 10.24 0.00 0.00 4.16
3531 11459 4.328983 ACTCTTGATTTTATACGCACGGTG 59.671 41.667 3.15 3.15 0.00 4.94
3532 11460 4.501071 ACTCTTGATTTTATACGCACGGT 58.499 39.130 0.00 0.00 0.00 4.83
3533 11461 5.464965 AACTCTTGATTTTATACGCACGG 57.535 39.130 0.00 0.00 0.00 4.94
3534 11462 9.485591 AAATTAACTCTTGATTTTATACGCACG 57.514 29.630 0.00 0.00 0.00 5.34
3563 11491 6.749036 ACATGTAATTTGGGGGTACAAAAA 57.251 33.333 0.00 0.00 42.91 1.94
3568 11496 4.011698 ACGAACATGTAATTTGGGGGTAC 58.988 43.478 0.00 0.00 0.00 3.34
3570 11498 2.823154 CACGAACATGTAATTTGGGGGT 59.177 45.455 0.00 0.00 0.00 4.95
3571 11499 2.165437 CCACGAACATGTAATTTGGGGG 59.835 50.000 0.00 0.00 31.09 5.40
3578 11506 1.206132 TCTCCGCCACGAACATGTAAT 59.794 47.619 0.00 0.00 0.00 1.89
3583 11511 2.910688 AATATCTCCGCCACGAACAT 57.089 45.000 0.00 0.00 0.00 2.71
3589 11517 3.071167 AGAAGGGTTAATATCTCCGCCAC 59.929 47.826 0.00 0.00 0.00 5.01
3603 11531 9.516546 AAATTACGAAAAATCTCTAGAAGGGTT 57.483 29.630 0.00 0.00 0.00 4.11
3642 11570 3.002102 CAAAAAGTGGCACAAGTTTGCT 58.998 40.909 21.41 0.68 44.16 3.91
3658 11586 6.510536 CATAAAAAGCAAAATGGGGCAAAAA 58.489 32.000 0.00 0.00 0.00 1.94
3661 11589 3.505293 GCATAAAAAGCAAAATGGGGCAA 59.495 39.130 0.00 0.00 0.00 4.52
3696 11624 6.879458 AGGTGCTAACTAAACTTTCTATGTGG 59.121 38.462 0.00 0.00 0.00 4.17
3721 11649 2.846193 CAAACCAGGAGAAGAACGGAA 58.154 47.619 0.00 0.00 0.00 4.30
3723 11651 0.875059 GCAAACCAGGAGAAGAACGG 59.125 55.000 0.00 0.00 0.00 4.44
3725 11653 3.189495 GCTAAGCAAACCAGGAGAAGAAC 59.811 47.826 0.00 0.00 0.00 3.01
3728 11656 3.006247 GAGCTAAGCAAACCAGGAGAAG 58.994 50.000 0.00 0.00 0.00 2.85
3730 11658 2.260822 AGAGCTAAGCAAACCAGGAGA 58.739 47.619 0.00 0.00 0.00 3.71
3737 11665 4.880696 AGATCATCCAAGAGCTAAGCAAAC 59.119 41.667 0.00 0.00 31.46 2.93
3747 11675 2.103094 TGCCGGTTAGATCATCCAAGAG 59.897 50.000 1.90 0.00 0.00 2.85
3753 11681 1.160137 GCCATGCCGGTTAGATCATC 58.840 55.000 1.90 0.00 36.97 2.92
3754 11682 0.250901 GGCCATGCCGGTTAGATCAT 60.251 55.000 1.90 0.00 39.62 2.45
3755 11683 1.148273 GGCCATGCCGGTTAGATCA 59.852 57.895 1.90 0.00 39.62 2.92
3756 11684 4.065110 GGCCATGCCGGTTAGATC 57.935 61.111 1.90 0.00 39.62 2.75
3766 11694 3.064324 GGTGTGACTGGGCCATGC 61.064 66.667 6.72 2.17 0.00 4.06
3767 11695 2.747460 CGGTGTGACTGGGCCATG 60.747 66.667 6.72 3.79 0.00 3.66
3768 11696 4.722700 GCGGTGTGACTGGGCCAT 62.723 66.667 6.72 0.00 0.00 4.40
3795 11723 0.184692 TGAACATGGAGTTGGGTGCA 59.815 50.000 0.00 0.00 41.51 4.57
3796 11724 0.598065 GTGAACATGGAGTTGGGTGC 59.402 55.000 0.00 0.00 41.51 5.01
3799 11727 1.442769 CGAGTGAACATGGAGTTGGG 58.557 55.000 0.00 0.00 41.51 4.12
3800 11728 0.798776 GCGAGTGAACATGGAGTTGG 59.201 55.000 0.00 0.00 41.51 3.77
3801 11729 1.728971 GAGCGAGTGAACATGGAGTTG 59.271 52.381 0.00 0.00 41.51 3.16
3802 11730 1.344438 TGAGCGAGTGAACATGGAGTT 59.656 47.619 0.00 0.00 44.93 3.01
3803 11731 0.969149 TGAGCGAGTGAACATGGAGT 59.031 50.000 0.00 0.00 0.00 3.85
3804 11732 2.200067 GATGAGCGAGTGAACATGGAG 58.800 52.381 0.00 0.00 0.00 3.86
3808 11736 2.625737 CTTGGATGAGCGAGTGAACAT 58.374 47.619 0.00 0.00 0.00 2.71
3809 11737 1.941209 GCTTGGATGAGCGAGTGAACA 60.941 52.381 0.00 0.00 32.23 3.18
3810 11738 0.723981 GCTTGGATGAGCGAGTGAAC 59.276 55.000 0.00 0.00 32.23 3.18
3824 11752 2.037136 CACTCTTCCGGCTGCTTGG 61.037 63.158 0.00 2.08 0.00 3.61
3828 11756 2.328099 CCAACACTCTTCCGGCTGC 61.328 63.158 0.00 0.00 0.00 5.25
3831 11759 1.675641 ATGCCAACACTCTTCCGGC 60.676 57.895 0.00 0.00 43.28 6.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.