Multiple sequence alignment - TraesCS2A01G019600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G019600 chr2A 100.000 2533 0 0 1 2533 9094984 9092452 0.000000e+00 4678.0
1 TraesCS2A01G019600 chr2A 93.296 1775 106 7 226 2000 9982684 9984445 0.000000e+00 2606.0
2 TraesCS2A01G019600 chr2A 80.726 1681 304 14 320 1988 9111300 9109628 0.000000e+00 1291.0
3 TraesCS2A01G019600 chr2A 80.263 1672 294 30 348 1998 8630806 8632462 0.000000e+00 1227.0
4 TraesCS2A01G019600 chr2A 87.283 173 15 2 2179 2344 9984492 9984664 1.080000e-44 191.0
5 TraesCS2A01G019600 chr2A 100.000 55 0 0 2900 2954 9092085 9092031 5.210000e-18 102.0
6 TraesCS2A01G019600 chr2B 96.178 1884 64 5 264 2145 13068736 13066859 0.000000e+00 3073.0
7 TraesCS2A01G019600 chr2B 80.235 1705 300 26 429 2110 11539734 11538044 0.000000e+00 1247.0
8 TraesCS2A01G019600 chr2B 79.501 1722 304 36 431 2126 12942356 12944054 0.000000e+00 1179.0
9 TraesCS2A01G019600 chr2B 79.676 1545 265 29 500 2008 768807004 768805473 0.000000e+00 1068.0
10 TraesCS2A01G019600 chr2B 94.286 140 7 1 2006 2144 13064093 13063954 2.310000e-51 213.0
11 TraesCS2A01G019600 chr2B 84.568 162 21 4 2346 2504 13060483 13060323 1.100000e-34 158.0
12 TraesCS2A01G019600 chr2B 100.000 36 0 0 226 261 13069067 13069032 1.900000e-07 67.6
13 TraesCS2A01G019600 chr2D 93.226 1609 76 12 763 2344 9758268 9756666 0.000000e+00 2337.0
14 TraesCS2A01G019600 chr2D 81.156 1592 275 16 426 2000 9588218 9589801 0.000000e+00 1254.0
15 TraesCS2A01G019600 chr2D 91.700 506 36 4 226 731 9758766 9758267 0.000000e+00 697.0
16 TraesCS2A01G019600 chr2D 94.714 227 10 2 3 227 552109043 552108817 4.680000e-93 351.0
17 TraesCS2A01G019600 chr2D 96.296 189 3 2 2346 2533 9756184 9755999 1.030000e-79 307.0
18 TraesCS2A01G019600 chr2D 94.444 54 3 0 2900 2953 9755991 9755938 1.890000e-12 84.2
19 TraesCS2A01G019600 chr4D 80.370 1620 298 15 390 1999 464204500 464206109 0.000000e+00 1212.0
20 TraesCS2A01G019600 chr4D 96.364 220 7 1 3 222 2699183 2698965 7.780000e-96 361.0
21 TraesCS2A01G019600 chr4D 94.444 234 7 2 3 232 5368783 5369014 3.620000e-94 355.0
22 TraesCS2A01G019600 chr7D 96.889 225 7 0 3 227 631647737 631647513 7.730000e-101 377.0
23 TraesCS2A01G019600 chr7D 94.737 228 9 2 3 227 5505310 5505537 4.680000e-93 351.0
24 TraesCS2A01G019600 chr6B 96.000 225 7 2 3 225 258004552 258004776 6.020000e-97 364.0
25 TraesCS2A01G019600 chr6B 96.018 226 6 2 3 225 680802356 680802581 6.020000e-97 364.0
26 TraesCS2A01G019600 chr4A 95.556 225 9 1 3 226 363123897 363124121 2.800000e-95 359.0
27 TraesCS2A01G019600 chr6A 94.714 227 10 2 3 227 156134127 156134353 4.680000e-93 351.0
28 TraesCS2A01G019600 chr7A 76.596 141 23 6 2009 2143 680679177 680679041 5.280000e-08 69.4
29 TraesCS2A01G019600 chr7B 76.296 135 19 5 2009 2135 663749641 663749512 3.180000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G019600 chr2A 9092031 9094984 2953 True 2390.0 4678 100.0000 1 2954 2 chr2A.!!$R2 2953
1 TraesCS2A01G019600 chr2A 9982684 9984664 1980 False 1398.5 2606 90.2895 226 2344 2 chr2A.!!$F2 2118
2 TraesCS2A01G019600 chr2A 9109628 9111300 1672 True 1291.0 1291 80.7260 320 1988 1 chr2A.!!$R1 1668
3 TraesCS2A01G019600 chr2A 8630806 8632462 1656 False 1227.0 1227 80.2630 348 1998 1 chr2A.!!$F1 1650
4 TraesCS2A01G019600 chr2B 11538044 11539734 1690 True 1247.0 1247 80.2350 429 2110 1 chr2B.!!$R1 1681
5 TraesCS2A01G019600 chr2B 12942356 12944054 1698 False 1179.0 1179 79.5010 431 2126 1 chr2B.!!$F1 1695
6 TraesCS2A01G019600 chr2B 768805473 768807004 1531 True 1068.0 1068 79.6760 500 2008 1 chr2B.!!$R2 1508
7 TraesCS2A01G019600 chr2B 13060323 13069067 8744 True 877.9 3073 93.7580 226 2504 4 chr2B.!!$R3 2278
8 TraesCS2A01G019600 chr2D 9588218 9589801 1583 False 1254.0 1254 81.1560 426 2000 1 chr2D.!!$F1 1574
9 TraesCS2A01G019600 chr2D 9755938 9758766 2828 True 856.3 2337 93.9165 226 2953 4 chr2D.!!$R2 2727
10 TraesCS2A01G019600 chr4D 464204500 464206109 1609 False 1212.0 1212 80.3700 390 1999 1 chr4D.!!$F2 1609

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
24 25 0.032017 AGTGGGATCTACCTCGGCTT 60.032 55.0 0.00 0.00 38.98 4.35 F
191 192 0.179004 TTGTGATTCGGTGGGTGCTT 60.179 50.0 0.00 0.00 0.00 3.91 F
192 193 0.179004 TGTGATTCGGTGGGTGCTTT 60.179 50.0 0.00 0.00 0.00 3.51 F
1116 1445 0.548989 TAGGTGGTGCAACAACTGGT 59.451 50.0 32.54 9.14 41.78 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1700 2034 0.108520 TGGATGCGAAGTAACGTCCC 60.109 55.0 0.0 0.0 35.59 4.46 R
1884 2221 0.744874 GTGTATCCTGAGCACGCCTA 59.255 55.0 0.0 0.0 0.00 3.93 R
1887 2224 1.212616 GATGTGTATCCTGAGCACGC 58.787 55.0 0.0 0.0 36.04 5.34 R
2406 8969 0.178975 ATTTGGTGGGCTCAAACGGA 60.179 50.0 0.0 0.0 37.00 4.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 2.611225 CTTGCAGTGGGATCTACCTC 57.389 55.000 0.00 0.00 38.98 3.85
20 21 0.824109 TTGCAGTGGGATCTACCTCG 59.176 55.000 0.00 0.00 38.98 4.63
21 22 1.043116 TGCAGTGGGATCTACCTCGG 61.043 60.000 0.00 0.00 38.98 4.63
22 23 1.742768 CAGTGGGATCTACCTCGGC 59.257 63.158 0.00 0.00 38.98 5.54
23 24 0.757188 CAGTGGGATCTACCTCGGCT 60.757 60.000 0.00 0.00 38.98 5.52
24 25 0.032017 AGTGGGATCTACCTCGGCTT 60.032 55.000 0.00 0.00 38.98 4.35
25 26 1.217183 AGTGGGATCTACCTCGGCTTA 59.783 52.381 0.00 0.00 38.98 3.09
26 27 1.614413 GTGGGATCTACCTCGGCTTAG 59.386 57.143 0.00 0.00 38.98 2.18
27 28 1.217183 TGGGATCTACCTCGGCTTAGT 59.783 52.381 0.00 0.00 38.98 2.24
28 29 1.887854 GGGATCTACCTCGGCTTAGTC 59.112 57.143 0.00 0.00 38.98 2.59
29 30 1.536331 GGATCTACCTCGGCTTAGTCG 59.464 57.143 0.00 0.00 35.41 4.18
30 31 2.220313 GATCTACCTCGGCTTAGTCGT 58.780 52.381 6.03 0.00 30.45 4.34
31 32 1.376543 TCTACCTCGGCTTAGTCGTG 58.623 55.000 6.03 3.38 30.45 4.35
33 34 1.660560 TACCTCGGCTTAGTCGTGGC 61.661 60.000 24.32 0.00 46.24 5.01
36 37 3.179265 CGGCTTAGTCGTGGCGTG 61.179 66.667 0.00 0.00 45.15 5.34
37 38 2.048503 GGCTTAGTCGTGGCGTGT 60.049 61.111 0.00 0.00 0.00 4.49
38 39 2.380410 GGCTTAGTCGTGGCGTGTG 61.380 63.158 0.00 0.00 0.00 3.82
39 40 1.663702 GCTTAGTCGTGGCGTGTGT 60.664 57.895 0.00 0.00 0.00 3.72
40 41 1.219522 GCTTAGTCGTGGCGTGTGTT 61.220 55.000 0.00 0.00 0.00 3.32
41 42 0.506932 CTTAGTCGTGGCGTGTGTTG 59.493 55.000 0.00 0.00 0.00 3.33
42 43 0.876777 TTAGTCGTGGCGTGTGTTGG 60.877 55.000 0.00 0.00 0.00 3.77
43 44 4.307908 GTCGTGGCGTGTGTTGGC 62.308 66.667 0.00 0.00 0.00 4.52
44 45 4.539083 TCGTGGCGTGTGTTGGCT 62.539 61.111 0.00 0.00 0.00 4.75
45 46 4.012895 CGTGGCGTGTGTTGGCTC 62.013 66.667 0.00 0.00 0.00 4.70
46 47 3.660111 GTGGCGTGTGTTGGCTCC 61.660 66.667 0.00 0.00 0.00 4.70
47 48 3.872603 TGGCGTGTGTTGGCTCCT 61.873 61.111 0.00 0.00 0.00 3.69
48 49 3.357079 GGCGTGTGTTGGCTCCTG 61.357 66.667 0.00 0.00 0.00 3.86
49 50 2.591715 GCGTGTGTTGGCTCCTGT 60.592 61.111 0.00 0.00 0.00 4.00
50 51 2.186826 GCGTGTGTTGGCTCCTGTT 61.187 57.895 0.00 0.00 0.00 3.16
51 52 1.941812 CGTGTGTTGGCTCCTGTTC 59.058 57.895 0.00 0.00 0.00 3.18
52 53 1.831389 CGTGTGTTGGCTCCTGTTCG 61.831 60.000 0.00 0.00 0.00 3.95
53 54 1.891919 TGTGTTGGCTCCTGTTCGC 60.892 57.895 0.00 0.00 0.00 4.70
54 55 2.281484 TGTTGGCTCCTGTTCGCC 60.281 61.111 0.00 0.00 46.46 5.54
58 59 4.821589 GGCTCCTGTTCGCCGAGG 62.822 72.222 0.00 0.00 36.45 4.63
59 60 4.821589 GCTCCTGTTCGCCGAGGG 62.822 72.222 0.00 0.00 0.00 4.30
60 61 4.821589 CTCCTGTTCGCCGAGGGC 62.822 72.222 0.00 0.00 46.75 5.19
74 75 0.729690 GAGGGCTTCGATGTTCAAGC 59.270 55.000 0.00 0.00 43.72 4.01
75 76 0.326264 AGGGCTTCGATGTTCAAGCT 59.674 50.000 4.66 0.00 43.89 3.74
76 77 1.168714 GGGCTTCGATGTTCAAGCTT 58.831 50.000 4.66 0.00 43.89 3.74
77 78 1.135575 GGGCTTCGATGTTCAAGCTTG 60.136 52.381 20.81 20.81 43.89 4.01
78 79 1.537202 GGCTTCGATGTTCAAGCTTGT 59.463 47.619 25.19 6.68 43.89 3.16
79 80 2.578495 GCTTCGATGTTCAAGCTTGTG 58.422 47.619 25.19 2.24 41.61 3.33
80 81 2.578495 CTTCGATGTTCAAGCTTGTGC 58.422 47.619 25.19 18.49 40.05 4.57
97 98 2.846371 GCTTGGTGCATTCGAGTCT 58.154 52.632 0.00 0.00 42.31 3.24
98 99 1.160137 GCTTGGTGCATTCGAGTCTT 58.840 50.000 0.00 0.00 42.31 3.01
99 100 1.135859 GCTTGGTGCATTCGAGTCTTG 60.136 52.381 0.00 0.00 42.31 3.02
100 101 2.146342 CTTGGTGCATTCGAGTCTTGT 58.854 47.619 0.00 0.00 0.00 3.16
101 102 2.254546 TGGTGCATTCGAGTCTTGTT 57.745 45.000 0.00 0.00 0.00 2.83
102 103 3.394674 TGGTGCATTCGAGTCTTGTTA 57.605 42.857 0.00 0.00 0.00 2.41
103 104 3.325870 TGGTGCATTCGAGTCTTGTTAG 58.674 45.455 0.00 0.00 0.00 2.34
104 105 3.244078 TGGTGCATTCGAGTCTTGTTAGT 60.244 43.478 0.00 0.00 0.00 2.24
105 106 3.123621 GGTGCATTCGAGTCTTGTTAGTG 59.876 47.826 0.00 0.00 0.00 2.74
106 107 3.123621 GTGCATTCGAGTCTTGTTAGTGG 59.876 47.826 0.00 0.00 0.00 4.00
107 108 2.094417 GCATTCGAGTCTTGTTAGTGGC 59.906 50.000 0.00 0.00 0.00 5.01
108 109 3.589988 CATTCGAGTCTTGTTAGTGGCT 58.410 45.455 0.00 0.00 0.00 4.75
109 110 3.299340 TTCGAGTCTTGTTAGTGGCTC 57.701 47.619 0.00 0.00 0.00 4.70
110 111 1.544691 TCGAGTCTTGTTAGTGGCTCC 59.455 52.381 0.00 0.00 0.00 4.70
111 112 1.546476 CGAGTCTTGTTAGTGGCTCCT 59.454 52.381 0.00 0.00 0.00 3.69
112 113 2.028930 CGAGTCTTGTTAGTGGCTCCTT 60.029 50.000 0.00 0.00 0.00 3.36
113 114 3.555168 CGAGTCTTGTTAGTGGCTCCTTT 60.555 47.826 0.00 0.00 0.00 3.11
114 115 3.744660 AGTCTTGTTAGTGGCTCCTTTG 58.255 45.455 0.00 0.00 0.00 2.77
115 116 2.814336 GTCTTGTTAGTGGCTCCTTTGG 59.186 50.000 0.00 0.00 0.00 3.28
116 117 2.441750 TCTTGTTAGTGGCTCCTTTGGT 59.558 45.455 0.00 0.00 0.00 3.67
117 118 3.649023 TCTTGTTAGTGGCTCCTTTGGTA 59.351 43.478 0.00 0.00 0.00 3.25
118 119 4.288626 TCTTGTTAGTGGCTCCTTTGGTAT 59.711 41.667 0.00 0.00 0.00 2.73
119 120 4.216411 TGTTAGTGGCTCCTTTGGTATC 57.784 45.455 0.00 0.00 0.00 2.24
120 121 3.844211 TGTTAGTGGCTCCTTTGGTATCT 59.156 43.478 0.00 0.00 0.00 1.98
121 122 4.288626 TGTTAGTGGCTCCTTTGGTATCTT 59.711 41.667 0.00 0.00 0.00 2.40
122 123 3.356529 AGTGGCTCCTTTGGTATCTTG 57.643 47.619 0.00 0.00 0.00 3.02
123 124 2.644798 AGTGGCTCCTTTGGTATCTTGT 59.355 45.455 0.00 0.00 0.00 3.16
124 125 3.844211 AGTGGCTCCTTTGGTATCTTGTA 59.156 43.478 0.00 0.00 0.00 2.41
125 126 4.475016 AGTGGCTCCTTTGGTATCTTGTAT 59.525 41.667 0.00 0.00 0.00 2.29
126 127 5.665812 AGTGGCTCCTTTGGTATCTTGTATA 59.334 40.000 0.00 0.00 0.00 1.47
127 128 6.330250 AGTGGCTCCTTTGGTATCTTGTATAT 59.670 38.462 0.00 0.00 0.00 0.86
128 129 6.998673 GTGGCTCCTTTGGTATCTTGTATATT 59.001 38.462 0.00 0.00 0.00 1.28
129 130 7.502561 GTGGCTCCTTTGGTATCTTGTATATTT 59.497 37.037 0.00 0.00 0.00 1.40
130 131 7.502226 TGGCTCCTTTGGTATCTTGTATATTTG 59.498 37.037 0.00 0.00 0.00 2.32
131 132 7.363431 GCTCCTTTGGTATCTTGTATATTTGC 58.637 38.462 0.00 0.00 0.00 3.68
132 133 7.522236 GCTCCTTTGGTATCTTGTATATTTGCC 60.522 40.741 0.00 0.00 0.00 4.52
133 134 6.485313 TCCTTTGGTATCTTGTATATTTGCCG 59.515 38.462 0.00 0.00 0.00 5.69
134 135 6.262273 CCTTTGGTATCTTGTATATTTGCCGT 59.738 38.462 0.00 0.00 0.00 5.68
135 136 7.201785 CCTTTGGTATCTTGTATATTTGCCGTT 60.202 37.037 0.00 0.00 0.00 4.44
136 137 7.633193 TTGGTATCTTGTATATTTGCCGTTT 57.367 32.000 0.00 0.00 0.00 3.60
137 138 8.734218 TTGGTATCTTGTATATTTGCCGTTTA 57.266 30.769 0.00 0.00 0.00 2.01
138 139 8.911918 TGGTATCTTGTATATTTGCCGTTTAT 57.088 30.769 0.00 0.00 0.00 1.40
139 140 8.779303 TGGTATCTTGTATATTTGCCGTTTATG 58.221 33.333 0.00 0.00 0.00 1.90
140 141 8.234546 GGTATCTTGTATATTTGCCGTTTATGG 58.765 37.037 0.00 0.00 0.00 2.74
141 142 7.817418 ATCTTGTATATTTGCCGTTTATGGT 57.183 32.000 0.00 0.00 0.00 3.55
142 143 7.633193 TCTTGTATATTTGCCGTTTATGGTT 57.367 32.000 0.00 0.00 0.00 3.67
143 144 8.057536 TCTTGTATATTTGCCGTTTATGGTTT 57.942 30.769 0.00 0.00 0.00 3.27
144 145 8.524487 TCTTGTATATTTGCCGTTTATGGTTTT 58.476 29.630 0.00 0.00 0.00 2.43
145 146 9.145865 CTTGTATATTTGCCGTTTATGGTTTTT 57.854 29.630 0.00 0.00 0.00 1.94
168 169 8.850454 TTTTCTTCCTTTCTTTTGTATCGTTG 57.150 30.769 0.00 0.00 0.00 4.10
169 170 7.795482 TTCTTCCTTTCTTTTGTATCGTTGA 57.205 32.000 0.00 0.00 0.00 3.18
170 171 7.795482 TCTTCCTTTCTTTTGTATCGTTGAA 57.205 32.000 0.00 0.00 0.00 2.69
171 172 7.636326 TCTTCCTTTCTTTTGTATCGTTGAAC 58.364 34.615 0.00 0.00 0.00 3.18
172 173 7.497909 TCTTCCTTTCTTTTGTATCGTTGAACT 59.502 33.333 0.00 0.00 0.00 3.01
173 174 7.562454 TCCTTTCTTTTGTATCGTTGAACTT 57.438 32.000 0.00 0.00 0.00 2.66
174 175 7.414436 TCCTTTCTTTTGTATCGTTGAACTTG 58.586 34.615 0.00 0.00 0.00 3.16
175 176 7.066525 TCCTTTCTTTTGTATCGTTGAACTTGT 59.933 33.333 0.00 0.00 0.00 3.16
176 177 7.165812 CCTTTCTTTTGTATCGTTGAACTTGTG 59.834 37.037 0.00 0.00 0.00 3.33
177 178 6.912203 TCTTTTGTATCGTTGAACTTGTGA 57.088 33.333 0.00 0.00 0.00 3.58
178 179 7.490962 TCTTTTGTATCGTTGAACTTGTGAT 57.509 32.000 0.00 0.00 0.00 3.06
179 180 7.925993 TCTTTTGTATCGTTGAACTTGTGATT 58.074 30.769 0.00 0.00 0.00 2.57
180 181 8.067784 TCTTTTGTATCGTTGAACTTGTGATTC 58.932 33.333 0.00 0.00 0.00 2.52
181 182 5.509605 TGTATCGTTGAACTTGTGATTCG 57.490 39.130 0.00 0.00 0.00 3.34
182 183 4.387559 TGTATCGTTGAACTTGTGATTCGG 59.612 41.667 0.00 0.00 0.00 4.30
183 184 2.828877 TCGTTGAACTTGTGATTCGGT 58.171 42.857 0.00 0.00 0.00 4.69
184 185 2.542178 TCGTTGAACTTGTGATTCGGTG 59.458 45.455 0.00 0.00 0.00 4.94
185 186 2.349438 CGTTGAACTTGTGATTCGGTGG 60.349 50.000 0.00 0.00 0.00 4.61
186 187 1.890876 TGAACTTGTGATTCGGTGGG 58.109 50.000 0.00 0.00 0.00 4.61
187 188 1.142060 TGAACTTGTGATTCGGTGGGT 59.858 47.619 0.00 0.00 0.00 4.51
188 189 1.535462 GAACTTGTGATTCGGTGGGTG 59.465 52.381 0.00 0.00 0.00 4.61
189 190 0.889186 ACTTGTGATTCGGTGGGTGC 60.889 55.000 0.00 0.00 0.00 5.01
190 191 0.606401 CTTGTGATTCGGTGGGTGCT 60.606 55.000 0.00 0.00 0.00 4.40
191 192 0.179004 TTGTGATTCGGTGGGTGCTT 60.179 50.000 0.00 0.00 0.00 3.91
192 193 0.179004 TGTGATTCGGTGGGTGCTTT 60.179 50.000 0.00 0.00 0.00 3.51
193 194 1.072489 TGTGATTCGGTGGGTGCTTTA 59.928 47.619 0.00 0.00 0.00 1.85
194 195 2.290641 TGTGATTCGGTGGGTGCTTTAT 60.291 45.455 0.00 0.00 0.00 1.40
195 196 3.055021 TGTGATTCGGTGGGTGCTTTATA 60.055 43.478 0.00 0.00 0.00 0.98
196 197 3.942748 GTGATTCGGTGGGTGCTTTATAA 59.057 43.478 0.00 0.00 0.00 0.98
197 198 4.578928 GTGATTCGGTGGGTGCTTTATAAT 59.421 41.667 0.00 0.00 0.00 1.28
198 199 5.761234 GTGATTCGGTGGGTGCTTTATAATA 59.239 40.000 0.00 0.00 0.00 0.98
199 200 6.430000 GTGATTCGGTGGGTGCTTTATAATAT 59.570 38.462 0.00 0.00 0.00 1.28
200 201 7.604927 GTGATTCGGTGGGTGCTTTATAATATA 59.395 37.037 0.00 0.00 0.00 0.86
201 202 8.158132 TGATTCGGTGGGTGCTTTATAATATAA 58.842 33.333 0.00 0.00 0.00 0.98
202 203 8.927675 ATTCGGTGGGTGCTTTATAATATAAA 57.072 30.769 5.46 5.46 0.00 1.40
203 204 7.972832 TCGGTGGGTGCTTTATAATATAAAG 57.027 36.000 22.11 22.11 37.53 1.85
212 213 7.457024 GCTTTATAATATAAAGCGGGGGAAA 57.543 36.000 30.20 1.00 46.31 3.13
213 214 7.310664 GCTTTATAATATAAAGCGGGGGAAAC 58.689 38.462 30.20 11.52 46.31 2.78
272 566 3.407424 TCAACATCAGGTCAAGACTGG 57.593 47.619 0.00 0.00 36.62 4.00
357 651 6.668323 ACAAAGGTGAAAATGACAAGTATCG 58.332 36.000 0.00 0.00 0.00 2.92
463 761 5.452356 GCAGATGCCAGCCTATAAATTTGTT 60.452 40.000 0.00 0.00 34.31 2.83
489 787 2.167900 AGCCGACCAGTTGATTACCTAC 59.832 50.000 0.00 0.00 0.00 3.18
759 1066 2.631062 TGTGGTGGACAACTCGAAGTAT 59.369 45.455 0.00 0.00 0.00 2.12
987 1315 8.873830 CGTAGGCCATATGATGTTTATCTTTAG 58.126 37.037 5.01 0.00 34.31 1.85
1033 1362 2.514205 TGCTGAAAAGCAAAAGCTCC 57.486 45.000 0.00 0.00 42.40 4.70
1063 1392 3.865929 CTGCAGCACGACGACCCTT 62.866 63.158 0.00 0.00 0.00 3.95
1116 1445 0.548989 TAGGTGGTGCAACAACTGGT 59.451 50.000 32.54 9.14 41.78 4.00
1129 1458 6.096695 GCAACAACTGGTAAGAAAACTTTGA 58.903 36.000 0.00 0.00 0.00 2.69
1316 1645 9.399403 GGAAAAGTTTCACTCATTTCTCATAAC 57.601 33.333 6.15 0.00 38.92 1.89
1420 1749 4.524316 AGTGCTCTATCTCATGATGAGC 57.476 45.455 17.38 22.24 43.95 4.26
1989 2329 7.778470 AACTCTTGTAATATGTAGCTCTTGC 57.222 36.000 0.00 0.00 40.05 4.01
2229 5510 1.585267 GCGTGGATGTGGAATGCACA 61.585 55.000 10.55 10.55 39.83 4.57
2381 8944 6.379386 GGCTGTTACTAAATTCAGTCCAAAC 58.621 40.000 0.00 0.00 0.00 2.93
2953 9516 6.582677 TTCTGTGGAGTTTGTTTTCTTTGA 57.417 33.333 0.00 0.00 0.00 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.202463 CGAGGTAGATCCCACTGCAAG 60.202 57.143 0.00 0.00 37.04 4.01
1 2 0.824109 CGAGGTAGATCCCACTGCAA 59.176 55.000 0.00 0.00 36.75 4.08
2 3 1.043116 CCGAGGTAGATCCCACTGCA 61.043 60.000 0.00 0.00 36.75 4.41
3 4 1.742768 CCGAGGTAGATCCCACTGC 59.257 63.158 0.00 0.00 36.75 4.40
4 5 0.757188 AGCCGAGGTAGATCCCACTG 60.757 60.000 0.00 0.00 36.75 3.66
5 6 0.032017 AAGCCGAGGTAGATCCCACT 60.032 55.000 0.00 0.00 36.75 4.00
6 7 1.614413 CTAAGCCGAGGTAGATCCCAC 59.386 57.143 0.00 0.00 36.75 4.61
7 8 1.217183 ACTAAGCCGAGGTAGATCCCA 59.783 52.381 0.00 0.00 36.75 4.37
8 9 1.887854 GACTAAGCCGAGGTAGATCCC 59.112 57.143 0.00 0.00 36.75 3.85
9 10 1.536331 CGACTAAGCCGAGGTAGATCC 59.464 57.143 0.00 0.00 0.00 3.36
10 11 2.031857 CACGACTAAGCCGAGGTAGATC 60.032 54.545 0.00 0.00 0.00 2.75
11 12 1.948145 CACGACTAAGCCGAGGTAGAT 59.052 52.381 0.00 0.00 0.00 1.98
12 13 1.376543 CACGACTAAGCCGAGGTAGA 58.623 55.000 0.00 0.00 0.00 2.59
13 14 0.381089 CCACGACTAAGCCGAGGTAG 59.619 60.000 0.00 0.00 33.99 3.18
14 15 1.660560 GCCACGACTAAGCCGAGGTA 61.661 60.000 0.00 0.00 39.42 3.08
15 16 3.003113 GCCACGACTAAGCCGAGGT 62.003 63.158 0.00 0.00 39.42 3.85
16 17 2.202756 GCCACGACTAAGCCGAGG 60.203 66.667 0.00 0.00 40.04 4.63
17 18 2.579787 CGCCACGACTAAGCCGAG 60.580 66.667 0.00 0.00 0.00 4.63
18 19 3.367743 ACGCCACGACTAAGCCGA 61.368 61.111 0.00 0.00 0.00 5.54
19 20 3.179265 CACGCCACGACTAAGCCG 61.179 66.667 0.00 0.00 0.00 5.52
20 21 2.048503 ACACGCCACGACTAAGCC 60.049 61.111 0.00 0.00 0.00 4.35
21 22 1.219522 AACACACGCCACGACTAAGC 61.220 55.000 0.00 0.00 0.00 3.09
22 23 0.506932 CAACACACGCCACGACTAAG 59.493 55.000 0.00 0.00 0.00 2.18
23 24 0.876777 CCAACACACGCCACGACTAA 60.877 55.000 0.00 0.00 0.00 2.24
24 25 1.300311 CCAACACACGCCACGACTA 60.300 57.895 0.00 0.00 0.00 2.59
25 26 2.587753 CCAACACACGCCACGACT 60.588 61.111 0.00 0.00 0.00 4.18
26 27 4.307908 GCCAACACACGCCACGAC 62.308 66.667 0.00 0.00 0.00 4.34
27 28 4.539083 AGCCAACACACGCCACGA 62.539 61.111 0.00 0.00 0.00 4.35
28 29 4.012895 GAGCCAACACACGCCACG 62.013 66.667 0.00 0.00 0.00 4.94
29 30 3.660111 GGAGCCAACACACGCCAC 61.660 66.667 0.00 0.00 0.00 5.01
30 31 3.872603 AGGAGCCAACACACGCCA 61.873 61.111 0.00 0.00 0.00 5.69
31 32 3.357079 CAGGAGCCAACACACGCC 61.357 66.667 0.00 0.00 0.00 5.68
32 33 2.117941 GAACAGGAGCCAACACACGC 62.118 60.000 0.00 0.00 0.00 5.34
33 34 1.831389 CGAACAGGAGCCAACACACG 61.831 60.000 0.00 0.00 0.00 4.49
34 35 1.941812 CGAACAGGAGCCAACACAC 59.058 57.895 0.00 0.00 0.00 3.82
35 36 1.891919 GCGAACAGGAGCCAACACA 60.892 57.895 0.00 0.00 0.00 3.72
36 37 2.946762 GCGAACAGGAGCCAACAC 59.053 61.111 0.00 0.00 0.00 3.32
42 43 4.821589 CCCTCGGCGAACAGGAGC 62.822 72.222 12.13 0.00 30.32 4.70
43 44 4.821589 GCCCTCGGCGAACAGGAG 62.822 72.222 20.61 10.05 39.62 3.69
55 56 0.729690 GCTTGAACATCGAAGCCCTC 59.270 55.000 0.00 0.00 38.96 4.30
56 57 0.326264 AGCTTGAACATCGAAGCCCT 59.674 50.000 0.00 0.00 44.79 5.19
57 58 1.135575 CAAGCTTGAACATCGAAGCCC 60.136 52.381 22.31 0.00 44.79 5.19
58 59 1.537202 ACAAGCTTGAACATCGAAGCC 59.463 47.619 32.50 0.00 44.79 4.35
59 60 2.578495 CACAAGCTTGAACATCGAAGC 58.422 47.619 32.50 0.00 44.16 3.86
60 61 2.578495 GCACAAGCTTGAACATCGAAG 58.422 47.619 32.50 10.81 37.91 3.79
61 62 2.686558 GCACAAGCTTGAACATCGAA 57.313 45.000 32.50 0.00 37.91 3.71
79 80 1.135859 CAAGACTCGAATGCACCAAGC 60.136 52.381 0.00 0.00 45.96 4.01
80 81 2.146342 ACAAGACTCGAATGCACCAAG 58.854 47.619 0.00 0.00 0.00 3.61
81 82 2.254546 ACAAGACTCGAATGCACCAA 57.745 45.000 0.00 0.00 0.00 3.67
82 83 2.254546 AACAAGACTCGAATGCACCA 57.745 45.000 0.00 0.00 0.00 4.17
83 84 3.123621 CACTAACAAGACTCGAATGCACC 59.876 47.826 0.00 0.00 0.00 5.01
84 85 3.123621 CCACTAACAAGACTCGAATGCAC 59.876 47.826 0.00 0.00 0.00 4.57
85 86 3.325870 CCACTAACAAGACTCGAATGCA 58.674 45.455 0.00 0.00 0.00 3.96
86 87 2.094417 GCCACTAACAAGACTCGAATGC 59.906 50.000 0.00 0.00 0.00 3.56
87 88 3.589988 AGCCACTAACAAGACTCGAATG 58.410 45.455 0.00 0.00 0.00 2.67
88 89 3.368531 GGAGCCACTAACAAGACTCGAAT 60.369 47.826 0.00 0.00 0.00 3.34
89 90 2.029290 GGAGCCACTAACAAGACTCGAA 60.029 50.000 0.00 0.00 0.00 3.71
90 91 1.544691 GGAGCCACTAACAAGACTCGA 59.455 52.381 0.00 0.00 0.00 4.04
91 92 1.546476 AGGAGCCACTAACAAGACTCG 59.454 52.381 0.00 0.00 0.00 4.18
92 93 3.686916 AAGGAGCCACTAACAAGACTC 57.313 47.619 0.00 0.00 0.00 3.36
93 94 3.496870 CCAAAGGAGCCACTAACAAGACT 60.497 47.826 0.00 0.00 0.00 3.24
94 95 2.814336 CCAAAGGAGCCACTAACAAGAC 59.186 50.000 0.00 0.00 0.00 3.01
95 96 2.441750 ACCAAAGGAGCCACTAACAAGA 59.558 45.455 0.00 0.00 0.00 3.02
96 97 2.863809 ACCAAAGGAGCCACTAACAAG 58.136 47.619 0.00 0.00 0.00 3.16
97 98 4.288626 AGATACCAAAGGAGCCACTAACAA 59.711 41.667 0.00 0.00 0.00 2.83
98 99 3.844211 AGATACCAAAGGAGCCACTAACA 59.156 43.478 0.00 0.00 0.00 2.41
99 100 4.489306 AGATACCAAAGGAGCCACTAAC 57.511 45.455 0.00 0.00 0.00 2.34
100 101 4.288626 ACAAGATACCAAAGGAGCCACTAA 59.711 41.667 0.00 0.00 0.00 2.24
101 102 3.844211 ACAAGATACCAAAGGAGCCACTA 59.156 43.478 0.00 0.00 0.00 2.74
102 103 2.644798 ACAAGATACCAAAGGAGCCACT 59.355 45.455 0.00 0.00 0.00 4.00
103 104 3.073274 ACAAGATACCAAAGGAGCCAC 57.927 47.619 0.00 0.00 0.00 5.01
104 105 6.763715 ATATACAAGATACCAAAGGAGCCA 57.236 37.500 0.00 0.00 0.00 4.75
105 106 7.522236 GCAAATATACAAGATACCAAAGGAGCC 60.522 40.741 0.00 0.00 0.00 4.70
106 107 7.363431 GCAAATATACAAGATACCAAAGGAGC 58.637 38.462 0.00 0.00 0.00 4.70
107 108 7.307989 CGGCAAATATACAAGATACCAAAGGAG 60.308 40.741 0.00 0.00 0.00 3.69
108 109 6.485313 CGGCAAATATACAAGATACCAAAGGA 59.515 38.462 0.00 0.00 0.00 3.36
109 110 6.262273 ACGGCAAATATACAAGATACCAAAGG 59.738 38.462 0.00 0.00 0.00 3.11
110 111 7.259290 ACGGCAAATATACAAGATACCAAAG 57.741 36.000 0.00 0.00 0.00 2.77
111 112 7.633193 AACGGCAAATATACAAGATACCAAA 57.367 32.000 0.00 0.00 0.00 3.28
112 113 7.633193 AAACGGCAAATATACAAGATACCAA 57.367 32.000 0.00 0.00 0.00 3.67
113 114 8.779303 CATAAACGGCAAATATACAAGATACCA 58.221 33.333 0.00 0.00 0.00 3.25
114 115 8.234546 CCATAAACGGCAAATATACAAGATACC 58.765 37.037 0.00 0.00 0.00 2.73
115 116 8.780249 ACCATAAACGGCAAATATACAAGATAC 58.220 33.333 0.00 0.00 0.00 2.24
116 117 8.911918 ACCATAAACGGCAAATATACAAGATA 57.088 30.769 0.00 0.00 0.00 1.98
117 118 7.817418 ACCATAAACGGCAAATATACAAGAT 57.183 32.000 0.00 0.00 0.00 2.40
118 119 7.633193 AACCATAAACGGCAAATATACAAGA 57.367 32.000 0.00 0.00 0.00 3.02
119 120 8.696410 AAAACCATAAACGGCAAATATACAAG 57.304 30.769 0.00 0.00 0.00 3.16
142 143 9.296400 CAACGATACAAAAGAAAGGAAGAAAAA 57.704 29.630 0.00 0.00 0.00 1.94
143 144 8.679100 TCAACGATACAAAAGAAAGGAAGAAAA 58.321 29.630 0.00 0.00 0.00 2.29
144 145 8.215926 TCAACGATACAAAAGAAAGGAAGAAA 57.784 30.769 0.00 0.00 0.00 2.52
145 146 7.795482 TCAACGATACAAAAGAAAGGAAGAA 57.205 32.000 0.00 0.00 0.00 2.52
146 147 7.497909 AGTTCAACGATACAAAAGAAAGGAAGA 59.502 33.333 0.00 0.00 0.00 2.87
147 148 7.639945 AGTTCAACGATACAAAAGAAAGGAAG 58.360 34.615 0.00 0.00 0.00 3.46
148 149 7.562454 AGTTCAACGATACAAAAGAAAGGAA 57.438 32.000 0.00 0.00 0.00 3.36
149 150 7.066525 ACAAGTTCAACGATACAAAAGAAAGGA 59.933 33.333 0.00 0.00 0.00 3.36
150 151 7.165812 CACAAGTTCAACGATACAAAAGAAAGG 59.834 37.037 0.00 0.00 0.00 3.11
151 152 7.908082 TCACAAGTTCAACGATACAAAAGAAAG 59.092 33.333 0.00 0.00 0.00 2.62
152 153 7.753659 TCACAAGTTCAACGATACAAAAGAAA 58.246 30.769 0.00 0.00 0.00 2.52
153 154 7.310072 TCACAAGTTCAACGATACAAAAGAA 57.690 32.000 0.00 0.00 0.00 2.52
154 155 6.912203 TCACAAGTTCAACGATACAAAAGA 57.088 33.333 0.00 0.00 0.00 2.52
155 156 7.058354 CGAATCACAAGTTCAACGATACAAAAG 59.942 37.037 0.00 0.00 0.00 2.27
156 157 6.848800 CGAATCACAAGTTCAACGATACAAAA 59.151 34.615 0.00 0.00 0.00 2.44
157 158 6.359545 CGAATCACAAGTTCAACGATACAAA 58.640 36.000 0.00 0.00 0.00 2.83
158 159 5.107259 CCGAATCACAAGTTCAACGATACAA 60.107 40.000 0.00 0.00 0.00 2.41
159 160 4.387559 CCGAATCACAAGTTCAACGATACA 59.612 41.667 0.00 0.00 0.00 2.29
160 161 4.387862 ACCGAATCACAAGTTCAACGATAC 59.612 41.667 0.00 0.00 0.00 2.24
161 162 4.387559 CACCGAATCACAAGTTCAACGATA 59.612 41.667 0.00 0.00 0.00 2.92
162 163 3.186409 CACCGAATCACAAGTTCAACGAT 59.814 43.478 0.00 0.00 0.00 3.73
163 164 2.542178 CACCGAATCACAAGTTCAACGA 59.458 45.455 0.00 0.00 0.00 3.85
164 165 2.349438 CCACCGAATCACAAGTTCAACG 60.349 50.000 0.00 0.00 0.00 4.10
165 166 2.031157 CCCACCGAATCACAAGTTCAAC 60.031 50.000 0.00 0.00 0.00 3.18
166 167 2.226330 CCCACCGAATCACAAGTTCAA 58.774 47.619 0.00 0.00 0.00 2.69
167 168 1.142060 ACCCACCGAATCACAAGTTCA 59.858 47.619 0.00 0.00 0.00 3.18
168 169 1.535462 CACCCACCGAATCACAAGTTC 59.465 52.381 0.00 0.00 0.00 3.01
169 170 1.604604 CACCCACCGAATCACAAGTT 58.395 50.000 0.00 0.00 0.00 2.66
170 171 0.889186 GCACCCACCGAATCACAAGT 60.889 55.000 0.00 0.00 0.00 3.16
171 172 0.606401 AGCACCCACCGAATCACAAG 60.606 55.000 0.00 0.00 0.00 3.16
172 173 0.179004 AAGCACCCACCGAATCACAA 60.179 50.000 0.00 0.00 0.00 3.33
173 174 0.179004 AAAGCACCCACCGAATCACA 60.179 50.000 0.00 0.00 0.00 3.58
174 175 1.816074 TAAAGCACCCACCGAATCAC 58.184 50.000 0.00 0.00 0.00 3.06
175 176 2.799126 ATAAAGCACCCACCGAATCA 57.201 45.000 0.00 0.00 0.00 2.57
176 177 8.556213 TTATATTATAAAGCACCCACCGAATC 57.444 34.615 0.00 0.00 0.00 2.52
177 178 8.927675 TTTATATTATAAAGCACCCACCGAAT 57.072 30.769 5.01 0.00 0.00 3.34
178 179 8.385898 CTTTATATTATAAAGCACCCACCGAA 57.614 34.615 18.54 0.00 0.00 4.30
179 180 7.972832 CTTTATATTATAAAGCACCCACCGA 57.027 36.000 18.54 0.00 0.00 4.69
189 190 7.094075 GGGTTTCCCCCGCTTTATATTATAAAG 60.094 40.741 23.28 23.28 45.80 1.85
190 191 6.720748 GGGTTTCCCCCGCTTTATATTATAAA 59.279 38.462 8.26 8.26 45.80 1.40
191 192 6.247676 GGGTTTCCCCCGCTTTATATTATAA 58.752 40.000 0.00 0.00 45.80 0.98
192 193 5.818887 GGGTTTCCCCCGCTTTATATTATA 58.181 41.667 0.00 0.00 45.80 0.98
193 194 4.669700 GGGTTTCCCCCGCTTTATATTAT 58.330 43.478 0.00 0.00 45.80 1.28
194 195 4.103013 GGGTTTCCCCCGCTTTATATTA 57.897 45.455 0.00 0.00 45.80 0.98
195 196 2.953453 GGGTTTCCCCCGCTTTATATT 58.047 47.619 0.00 0.00 45.80 1.28
196 197 2.670019 GGGTTTCCCCCGCTTTATAT 57.330 50.000 0.00 0.00 45.80 0.86
207 208 4.525487 AGAATTACCGAAAAAGGGTTTCCC 59.475 41.667 0.00 0.00 45.90 3.97
208 209 5.717078 AGAATTACCGAAAAAGGGTTTCC 57.283 39.130 0.00 0.00 38.99 3.13
209 210 6.978338 AGAAGAATTACCGAAAAAGGGTTTC 58.022 36.000 0.00 0.00 38.99 2.78
210 211 6.015688 GGAGAAGAATTACCGAAAAAGGGTTT 60.016 38.462 0.00 0.00 38.99 3.27
211 212 5.475909 GGAGAAGAATTACCGAAAAAGGGTT 59.524 40.000 0.00 0.00 38.99 4.11
212 213 5.008331 GGAGAAGAATTACCGAAAAAGGGT 58.992 41.667 0.00 0.00 41.62 4.34
213 214 5.007682 TGGAGAAGAATTACCGAAAAAGGG 58.992 41.667 0.00 0.00 35.02 3.95
214 215 6.759497 ATGGAGAAGAATTACCGAAAAAGG 57.241 37.500 0.00 0.00 37.30 3.11
215 216 8.182227 GGTAATGGAGAAGAATTACCGAAAAAG 58.818 37.037 8.41 0.00 44.99 2.27
216 217 8.047413 GGTAATGGAGAAGAATTACCGAAAAA 57.953 34.615 8.41 0.00 44.99 1.94
217 218 7.619964 GGTAATGGAGAAGAATTACCGAAAA 57.380 36.000 8.41 0.00 44.99 2.29
223 224 7.715249 TGCACTATGGTAATGGAGAAGAATTAC 59.285 37.037 0.00 0.00 38.15 1.89
224 225 7.801104 TGCACTATGGTAATGGAGAAGAATTA 58.199 34.615 0.00 0.00 0.00 1.40
272 566 6.204359 CACTGTGAGCATTTTTCATATAGGC 58.796 40.000 0.32 0.00 0.00 3.93
408 702 5.105063 TGCAGAGAGTCTTCACGAAATATG 58.895 41.667 0.00 0.00 0.00 1.78
463 761 4.456566 GGTAATCAACTGGTCGGCTTTTTA 59.543 41.667 0.00 0.00 0.00 1.52
489 787 3.303351 ACCTCCATGGCCAGAATTAAG 57.697 47.619 13.05 2.46 40.22 1.85
759 1066 1.544825 CCCCGTCTTGGAGAGCTTGA 61.545 60.000 0.00 0.00 42.00 3.02
987 1315 5.049405 CCGGCCAAACATGAAGTTATCTATC 60.049 44.000 2.24 0.00 40.26 2.08
1063 1392 0.464036 GCCGGTACATGATCACCAGA 59.536 55.000 1.90 0.00 34.25 3.86
1116 1445 7.648908 CACACATGAGCAATCAAAGTTTTCTTA 59.351 33.333 0.00 0.00 39.48 2.10
1129 1458 2.879907 GCCGCACACATGAGCAAT 59.120 55.556 0.00 0.00 0.00 3.56
1316 1645 4.703575 TGATCTTGCTTCCTCTTCCAATTG 59.296 41.667 0.00 0.00 0.00 2.32
1420 1749 6.038714 GCCATTATCTTGAAAAGGTACCTCAG 59.961 42.308 16.64 6.77 39.73 3.35
1700 2034 0.108520 TGGATGCGAAGTAACGTCCC 60.109 55.000 0.00 0.00 35.59 4.46
1884 2221 0.744874 GTGTATCCTGAGCACGCCTA 59.255 55.000 0.00 0.00 0.00 3.93
1887 2224 1.212616 GATGTGTATCCTGAGCACGC 58.787 55.000 0.00 0.00 36.04 5.34
2229 5510 7.004086 TGTAATCTGACCTGATCCAAGTTTTT 58.996 34.615 0.00 0.00 0.00 1.94
2344 5649 2.256117 AACAGCCCATATTAGACGCC 57.744 50.000 0.00 0.00 0.00 5.68
2406 8969 0.178975 ATTTGGTGGGCTCAAACGGA 60.179 50.000 0.00 0.00 37.00 4.69
2502 9065 4.363990 AGCAGGCGACACTGTCCG 62.364 66.667 3.50 0.81 40.59 4.79
2503 9066 2.740055 CAGCAGGCGACACTGTCC 60.740 66.667 3.50 0.00 40.59 4.02
2504 9067 2.029666 ACAGCAGGCGACACTGTC 59.970 61.111 10.91 0.00 43.91 3.51
2906 9469 2.749621 CCTTGTCAGTGGCAATTACCTC 59.250 50.000 11.23 0.00 0.00 3.85
2914 9477 0.550914 AGAAACCCTTGTCAGTGGCA 59.449 50.000 0.00 0.00 0.00 4.92
2919 9482 2.158755 ACTCCACAGAAACCCTTGTCAG 60.159 50.000 0.00 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.