Multiple sequence alignment - TraesCS2A01G018500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G018500 chr2A 100.000 5523 0 0 1 5523 8718540 8724062 0.000000e+00 10200.0
1 TraesCS2A01G018500 chr2A 86.475 244 19 9 2536 2779 8720855 8721084 7.100000e-64 255.0
2 TraesCS2A01G018500 chr2A 86.475 244 19 9 2316 2545 8721075 8721318 7.100000e-64 255.0
3 TraesCS2A01G018500 chr2D 93.323 3999 157 46 82 4043 9634526 9638451 0.000000e+00 5805.0
4 TraesCS2A01G018500 chr2D 93.232 1123 56 10 4024 5141 9638459 9639566 0.000000e+00 1635.0
5 TraesCS2A01G018500 chr2D 84.543 1281 165 21 3531 4789 9623641 9624910 0.000000e+00 1238.0
6 TraesCS2A01G018500 chr2D 83.780 672 78 18 1588 2251 9622035 9622683 4.730000e-170 608.0
7 TraesCS2A01G018500 chr2D 88.703 239 13 4 2316 2545 9636971 9637204 4.210000e-71 279.0
8 TraesCS2A01G018500 chr2D 86.603 209 18 9 73 277 9621074 9621276 7.200000e-54 222.0
9 TraesCS2A01G018500 chr2D 82.653 98 11 5 2901 2992 178280734 178280831 1.280000e-11 82.4
10 TraesCS2A01G018500 chr2D 81.633 98 12 4 2901 2998 420176008 420176099 5.930000e-10 76.8
11 TraesCS2A01G018500 chr2D 81.443 97 12 4 2901 2991 646498492 646498588 2.130000e-09 75.0
12 TraesCS2A01G018500 chr2B 88.281 1280 107 29 3456 4709 12951455 12952717 0.000000e+00 1493.0
13 TraesCS2A01G018500 chr2B 85.588 1242 133 28 3429 4647 11460039 11458821 0.000000e+00 1260.0
14 TraesCS2A01G018500 chr2B 85.714 812 76 22 696 1490 12948454 12949242 0.000000e+00 821.0
15 TraesCS2A01G018500 chr2B 85.062 810 81 19 696 1489 11463581 11462796 0.000000e+00 789.0
16 TraesCS2A01G018500 chr2B 89.130 598 48 9 158 748 11464178 11463591 0.000000e+00 728.0
17 TraesCS2A01G018500 chr2B 88.314 599 51 11 158 748 12947857 12948444 0.000000e+00 701.0
18 TraesCS2A01G018500 chr2B 81.797 868 125 21 3853 4705 12592178 12593027 0.000000e+00 697.0
19 TraesCS2A01G018500 chr2B 83.000 500 58 21 1762 2241 12949811 12950303 1.420000e-115 427.0
20 TraesCS2A01G018500 chr2B 92.025 163 11 1 1 163 11464461 11464301 1.550000e-55 228.0
21 TraesCS2A01G018500 chr2B 92.025 163 11 1 1 163 12947577 12947737 1.550000e-55 228.0
22 TraesCS2A01G018500 chr2B 80.189 106 16 4 3121 3223 11460472 11460369 2.130000e-09 75.0
23 TraesCS2A01G018500 chr2B 95.000 40 2 0 3121 3160 12951388 12951427 4.620000e-06 63.9
24 TraesCS2A01G018500 chr7B 76.990 1030 161 43 3556 4534 71579230 71578226 2.280000e-143 520.0
25 TraesCS2A01G018500 chr7B 79.817 109 12 9 2900 3000 251478933 251479039 2.760000e-08 71.3
26 TraesCS2A01G018500 chr7A 78.193 509 75 19 3475 3976 117085312 117084833 5.410000e-75 292.0
27 TraesCS2A01G018500 chr5A 83.099 213 27 4 1994 2197 689917877 689917665 9.450000e-43 185.0
28 TraesCS2A01G018500 chr5A 81.000 100 13 5 2901 2994 645276324 645276423 2.130000e-09 75.0
29 TraesCS2A01G018500 chr4D 82.710 214 28 4 1993 2197 505435163 505434950 1.220000e-41 182.0
30 TraesCS2A01G018500 chr4B 81.776 214 30 4 1993 2197 652290343 652290130 2.650000e-38 171.0
31 TraesCS2A01G018500 chr4B 81.373 102 13 5 2897 2992 597480496 597480597 1.650000e-10 78.7
32 TraesCS2A01G018500 chr7D 76.190 336 43 18 3470 3798 112128888 112128583 5.770000e-30 143.0
33 TraesCS2A01G018500 chr5D 83.505 97 10 5 2901 2991 460172373 460172469 9.860000e-13 86.1
34 TraesCS2A01G018500 chr6D 82.075 106 11 7 2894 2992 467773471 467773575 3.550000e-12 84.2
35 TraesCS2A01G018500 chr6D 94.444 36 2 0 1499 1534 30286474 30286509 7.730000e-04 56.5
36 TraesCS2A01G018500 chrUn 91.489 47 4 0 5251 5297 26991355 26991401 1.280000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G018500 chr2A 8718540 8724062 5522 False 3570.000000 10200 90.983333 1 5523 3 chr2A.!!$F1 5522
1 TraesCS2A01G018500 chr2D 9634526 9639566 5040 False 2573.000000 5805 91.752667 82 5141 3 chr2D.!!$F5 5059
2 TraesCS2A01G018500 chr2D 9621074 9624910 3836 False 689.333333 1238 84.975333 73 4789 3 chr2D.!!$F4 4716
3 TraesCS2A01G018500 chr2B 12592178 12593027 849 False 697.000000 697 81.797000 3853 4705 1 chr2B.!!$F1 852
4 TraesCS2A01G018500 chr2B 12947577 12952717 5140 False 622.316667 1493 88.722333 1 4709 6 chr2B.!!$F2 4708
5 TraesCS2A01G018500 chr2B 11458821 11464461 5640 True 616.000000 1260 86.398800 1 4647 5 chr2B.!!$R1 4646
6 TraesCS2A01G018500 chr7B 71578226 71579230 1004 True 520.000000 520 76.990000 3556 4534 1 chr7B.!!$R1 978

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
770 1172 1.022735 GAAGATACCGGCAGTCGAGA 58.977 55.000 0.00 0.00 42.43 4.04 F
2558 3802 0.179009 ATGTGTTGCAGGCACTCAGT 60.179 50.000 19.50 5.67 34.60 3.41 F
2559 3803 0.394216 TGTGTTGCAGGCACTCAGTT 60.394 50.000 19.50 0.00 34.60 3.16 F
2560 3804 0.740737 GTGTTGCAGGCACTCAGTTT 59.259 50.000 13.94 0.00 34.60 2.66 F
4169 6596 1.075659 GCCTGGAGGAAGCAAAGGT 59.924 57.895 0.00 0.00 37.39 3.50 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2583 3827 0.107361 GCCGTTTGCCCCACTAGTAT 60.107 55.000 0.00 0.0 0.00 2.12 R
4081 6508 1.198759 TTCCCACTGGTAGCCTCACC 61.199 60.000 0.00 0.0 39.20 4.02 R
4173 6600 2.124695 GCTCGGGCCTTTGGGTAG 60.125 66.667 0.84 0.0 34.45 3.18 R
4516 6972 6.197282 CGAGGTACTAGCAATATAATCATGCG 59.803 42.308 0.00 0.0 42.02 4.73 R
5371 7852 0.106918 TGTTGAAGGTGGTGTGGTCC 60.107 55.000 0.00 0.0 0.00 4.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 7.809806 GGTCAACAATCTTTTGATTCTTCGAAT 59.190 33.333 0.00 0.00 46.51 3.34
38 39 8.620416 TCTTTTGATTCTTCGAATCAGACAAAA 58.380 29.630 16.11 19.00 37.86 2.44
109 110 1.089112 CATCGCATCACACCACATGT 58.911 50.000 0.00 0.00 44.81 3.21
128 129 2.975536 CAGGGGCACCATTTGCAG 59.024 61.111 8.31 0.00 44.85 4.41
133 134 4.681607 AGGGGCACCATTTGCAGGATAG 62.682 54.545 8.31 0.00 44.85 2.08
137 138 3.287867 CACCATTTGCAGGATAGGAGT 57.712 47.619 0.00 0.00 0.00 3.85
138 139 4.422073 CACCATTTGCAGGATAGGAGTA 57.578 45.455 0.00 0.00 0.00 2.59
139 140 4.384056 CACCATTTGCAGGATAGGAGTAG 58.616 47.826 0.00 0.00 0.00 2.57
141 142 4.475016 ACCATTTGCAGGATAGGAGTAGTT 59.525 41.667 0.00 0.00 0.00 2.24
251 395 3.776969 TCTGTTGGTGGATAAGAGAGCAT 59.223 43.478 0.00 0.00 0.00 3.79
258 402 2.226674 TGGATAAGAGAGCATACGAGCG 59.773 50.000 0.00 0.00 40.15 5.03
518 795 9.706846 GCTTGCACAAAAATATATTTTTCCATC 57.293 29.630 26.18 17.66 45.29 3.51
660 937 4.024048 CGGTTAGCAATTCTCAAACACAGT 60.024 41.667 0.00 0.00 0.00 3.55
661 938 5.178623 CGGTTAGCAATTCTCAAACACAGTA 59.821 40.000 0.00 0.00 0.00 2.74
662 939 6.293190 CGGTTAGCAATTCTCAAACACAGTAA 60.293 38.462 0.00 0.00 0.00 2.24
663 940 7.078228 GGTTAGCAATTCTCAAACACAGTAAG 58.922 38.462 0.00 0.00 0.00 2.34
664 941 7.255139 GGTTAGCAATTCTCAAACACAGTAAGT 60.255 37.037 0.00 0.00 0.00 2.24
665 942 6.305693 AGCAATTCTCAAACACAGTAAGTC 57.694 37.500 0.00 0.00 0.00 3.01
666 943 5.822519 AGCAATTCTCAAACACAGTAAGTCA 59.177 36.000 0.00 0.00 0.00 3.41
667 944 6.017605 AGCAATTCTCAAACACAGTAAGTCAG 60.018 38.462 0.00 0.00 0.00 3.51
761 1163 1.807495 GCGAGGGAGGAAGATACCGG 61.807 65.000 0.00 0.00 34.73 5.28
770 1172 1.022735 GAAGATACCGGCAGTCGAGA 58.977 55.000 0.00 0.00 42.43 4.04
783 1185 4.624293 CGAGAAGAGATCGCGCAT 57.376 55.556 8.75 0.00 44.19 4.73
852 1254 4.324402 CGCATGGATTGAAAACTGCTTAAC 59.676 41.667 0.00 0.00 0.00 2.01
888 1290 3.309556 CCTCCCCTAGATCTCTCCCATAC 60.310 56.522 0.00 0.00 0.00 2.39
930 1332 1.067776 CCTCCCAACTCACGAGTACAC 60.068 57.143 0.00 0.00 41.58 2.90
1009 1415 2.125952 CAGTCGCGATGGCTCACA 60.126 61.111 14.06 0.00 36.88 3.58
1010 1416 1.520120 CAGTCGCGATGGCTCACAT 60.520 57.895 14.06 0.00 44.18 3.21
1067 1479 1.798735 CCTCTTCGTCGGCGTCTAA 59.201 57.895 10.18 0.00 39.49 2.10
1068 1480 0.381089 CCTCTTCGTCGGCGTCTAAT 59.619 55.000 10.18 0.00 39.49 1.73
1301 1713 5.288712 CCGTTCATGTGTTCATCTACACTAC 59.711 44.000 8.20 1.92 46.67 2.73
1451 1871 0.459237 GTGCCTCGGTCACTCATGAG 60.459 60.000 21.37 21.37 34.75 2.90
1497 1917 2.288666 CGTCCGTCCATTCAATTCCAT 58.711 47.619 0.00 0.00 0.00 3.41
1601 2272 1.742831 TGAAATAATGTGCAGGCGACC 59.257 47.619 0.00 0.00 0.00 4.79
1631 2302 2.032799 CAGACTCATAGGAGACGAGCAC 59.967 54.545 12.12 0.00 44.26 4.40
2019 3000 5.351740 GGTTGCTCTAAACTATCTGTTGGAC 59.648 44.000 0.00 0.00 39.13 4.02
2043 3024 0.325296 TGGGAGGAGAGTACGCCAAT 60.325 55.000 0.00 0.00 38.45 3.16
2070 3051 1.168714 GTGTGATTGACCTTGGAGGC 58.831 55.000 0.00 0.00 39.63 4.70
2088 3069 2.676471 GGGTCCGTGCAAATGGCT 60.676 61.111 0.00 0.00 45.15 4.75
2148 3129 5.052481 GTGGTTAAGGATCCGTATGTTACC 58.948 45.833 15.58 15.58 0.00 2.85
2206 3187 2.353803 GCTCACAGGTTAGTCGTTGGAT 60.354 50.000 0.00 0.00 0.00 3.41
2207 3188 3.254060 CTCACAGGTTAGTCGTTGGATG 58.746 50.000 0.00 0.00 0.00 3.51
2232 3213 9.866655 TGCTCAGAATATCCTTGGTTATTTTAT 57.133 29.630 4.93 0.00 0.00 1.40
2288 3305 5.598005 TGGTAGCTCCCCAAATTAATTGATG 59.402 40.000 0.39 0.00 39.07 3.07
2303 3320 4.665833 ATTGATGCCTTGATCAATGGTG 57.334 40.909 8.96 0.00 46.64 4.17
2306 3323 4.283337 TGATGCCTTGATCAATGGTGAAT 58.717 39.130 8.96 8.14 37.30 2.57
2310 3327 5.867330 TGCCTTGATCAATGGTGAATTTTT 58.133 33.333 8.96 0.00 37.30 1.94
2313 3330 8.102047 TGCCTTGATCAATGGTGAATTTTTAAT 58.898 29.630 8.96 0.00 37.30 1.40
2378 3622 4.515567 GTGATAAATACTAGTGGGGCAAGC 59.484 45.833 5.39 0.00 0.00 4.01
2381 3625 2.325393 ATACTAGTGGGGCAAGCGGC 62.325 60.000 5.39 0.00 43.74 6.53
2405 3649 7.189512 GCATGTGAGGAATATACAAAGTCAAC 58.810 38.462 0.00 0.00 0.00 3.18
2407 3651 7.016153 TGTGAGGAATATACAAAGTCAACCT 57.984 36.000 0.00 0.00 0.00 3.50
2410 3654 8.451748 GTGAGGAATATACAAAGTCAACCTTTC 58.548 37.037 0.00 0.00 41.51 2.62
2420 3664 6.098124 ACAAAGTCAACCTTTCATTTGATCCA 59.902 34.615 2.77 0.00 41.51 3.41
2449 3693 6.426980 TCTGGAATCAAACAAGATTGATCG 57.573 37.500 6.11 0.00 46.57 3.69
2451 3695 6.092670 TCTGGAATCAAACAAGATTGATCGTC 59.907 38.462 6.11 2.33 46.57 4.20
2452 3696 5.123820 TGGAATCAAACAAGATTGATCGTCC 59.876 40.000 12.96 12.96 46.57 4.79
2455 3699 7.065803 GGAATCAAACAAGATTGATCGTCCTTA 59.934 37.037 12.73 0.00 46.57 2.69
2456 3700 6.721571 TCAAACAAGATTGATCGTCCTTAC 57.278 37.500 0.00 0.00 34.50 2.34
2458 3702 6.368791 TCAAACAAGATTGATCGTCCTTACAG 59.631 38.462 0.00 0.00 34.50 2.74
2459 3703 5.407407 ACAAGATTGATCGTCCTTACAGT 57.593 39.130 0.00 0.00 0.00 3.55
2461 3705 7.113658 ACAAGATTGATCGTCCTTACAGTAT 57.886 36.000 0.00 0.00 0.00 2.12
2462 3706 8.234136 ACAAGATTGATCGTCCTTACAGTATA 57.766 34.615 0.00 0.00 0.00 1.47
2463 3707 8.861086 ACAAGATTGATCGTCCTTACAGTATAT 58.139 33.333 0.00 0.00 0.00 0.86
2464 3708 9.698309 CAAGATTGATCGTCCTTACAGTATATT 57.302 33.333 0.00 0.00 0.00 1.28
2466 3710 9.698309 AGATTGATCGTCCTTACAGTATATTTG 57.302 33.333 0.00 0.00 0.00 2.32
2467 3711 8.833231 ATTGATCGTCCTTACAGTATATTTGG 57.167 34.615 0.00 0.00 0.00 3.28
2468 3712 7.356089 TGATCGTCCTTACAGTATATTTGGT 57.644 36.000 0.00 0.00 0.00 3.67
2469 3713 7.788026 TGATCGTCCTTACAGTATATTTGGTT 58.212 34.615 0.00 0.00 0.00 3.67
2470 3714 7.709182 TGATCGTCCTTACAGTATATTTGGTTG 59.291 37.037 0.00 0.00 0.00 3.77
2471 3715 6.342906 TCGTCCTTACAGTATATTTGGTTGG 58.657 40.000 0.00 0.00 0.00 3.77
2472 3716 5.526111 CGTCCTTACAGTATATTTGGTTGGG 59.474 44.000 0.00 0.00 0.00 4.12
2473 3717 6.630863 CGTCCTTACAGTATATTTGGTTGGGA 60.631 42.308 0.00 0.00 0.00 4.37
2474 3718 7.114095 GTCCTTACAGTATATTTGGTTGGGAA 58.886 38.462 0.00 0.00 0.00 3.97
2475 3719 7.612633 GTCCTTACAGTATATTTGGTTGGGAAA 59.387 37.037 0.00 0.00 0.00 3.13
2476 3720 8.340757 TCCTTACAGTATATTTGGTTGGGAAAT 58.659 33.333 0.00 0.00 0.00 2.17
2477 3721 8.630037 CCTTACAGTATATTTGGTTGGGAAATC 58.370 37.037 0.00 0.00 0.00 2.17
2478 3722 9.408648 CTTACAGTATATTTGGTTGGGAAATCT 57.591 33.333 0.00 0.00 0.00 2.40
2481 3725 9.762381 ACAGTATATTTGGTTGGGAAATCTAAA 57.238 29.630 0.00 0.00 0.00 1.85
2488 3732 8.713708 TTTGGTTGGGAAATCTAAATACAAGA 57.286 30.769 0.00 0.00 0.00 3.02
2489 3733 8.893563 TTGGTTGGGAAATCTAAATACAAGAT 57.106 30.769 0.00 0.00 35.17 2.40
2490 3734 9.983024 TTGGTTGGGAAATCTAAATACAAGATA 57.017 29.630 0.00 0.00 33.32 1.98
2491 3735 9.627123 TGGTTGGGAAATCTAAATACAAGATAG 57.373 33.333 0.00 0.00 33.32 2.08
2492 3736 9.847224 GGTTGGGAAATCTAAATACAAGATAGA 57.153 33.333 0.00 0.00 33.32 1.98
2542 3786 8.635765 TTTAGAATAGAGAGGTGCAAAAATGT 57.364 30.769 0.00 0.00 0.00 2.71
2543 3787 6.506500 AGAATAGAGAGGTGCAAAAATGTG 57.493 37.500 0.00 0.00 0.00 3.21
2544 3788 6.006449 AGAATAGAGAGGTGCAAAAATGTGT 58.994 36.000 0.00 0.00 0.00 3.72
2545 3789 6.491403 AGAATAGAGAGGTGCAAAAATGTGTT 59.509 34.615 0.00 0.00 0.00 3.32
2546 3790 4.311816 AGAGAGGTGCAAAAATGTGTTG 57.688 40.909 0.00 0.00 0.00 3.33
2554 3798 2.553086 CAAAAATGTGTTGCAGGCACT 58.447 42.857 19.50 7.12 43.88 4.40
2555 3799 2.514205 AAAATGTGTTGCAGGCACTC 57.486 45.000 19.50 4.10 34.60 3.51
2556 3800 1.401761 AAATGTGTTGCAGGCACTCA 58.598 45.000 19.50 9.04 34.60 3.41
2557 3801 0.956633 AATGTGTTGCAGGCACTCAG 59.043 50.000 19.50 0.00 34.60 3.35
2558 3802 0.179009 ATGTGTTGCAGGCACTCAGT 60.179 50.000 19.50 5.67 34.60 3.41
2559 3803 0.394216 TGTGTTGCAGGCACTCAGTT 60.394 50.000 19.50 0.00 34.60 3.16
2560 3804 0.740737 GTGTTGCAGGCACTCAGTTT 59.259 50.000 13.94 0.00 34.60 2.66
2561 3805 1.946768 GTGTTGCAGGCACTCAGTTTA 59.053 47.619 13.94 0.00 34.60 2.01
2562 3806 2.357637 GTGTTGCAGGCACTCAGTTTAA 59.642 45.455 13.94 0.00 34.60 1.52
2563 3807 3.020274 TGTTGCAGGCACTCAGTTTAAA 58.980 40.909 0.00 0.00 34.60 1.52
2564 3808 3.445450 TGTTGCAGGCACTCAGTTTAAAA 59.555 39.130 0.00 0.00 34.60 1.52
2565 3809 4.081972 TGTTGCAGGCACTCAGTTTAAAAA 60.082 37.500 0.00 0.00 34.60 1.94
2566 3810 4.040445 TGCAGGCACTCAGTTTAAAAAC 57.960 40.909 0.00 0.00 34.60 2.43
2567 3811 3.445450 TGCAGGCACTCAGTTTAAAAACA 59.555 39.130 8.21 0.00 37.85 2.83
2568 3812 4.081972 TGCAGGCACTCAGTTTAAAAACAA 60.082 37.500 8.21 0.00 37.85 2.83
2569 3813 5.049828 GCAGGCACTCAGTTTAAAAACAAT 58.950 37.500 8.21 0.00 37.85 2.71
2570 3814 6.183360 TGCAGGCACTCAGTTTAAAAACAATA 60.183 34.615 8.21 0.00 37.85 1.90
2571 3815 6.363357 GCAGGCACTCAGTTTAAAAACAATAG 59.637 38.462 8.21 4.82 37.85 1.73
2572 3816 7.648142 CAGGCACTCAGTTTAAAAACAATAGA 58.352 34.615 8.21 0.67 37.85 1.98
2573 3817 8.299570 CAGGCACTCAGTTTAAAAACAATAGAT 58.700 33.333 8.21 0.00 37.85 1.98
2574 3818 8.299570 AGGCACTCAGTTTAAAAACAATAGATG 58.700 33.333 8.21 0.00 41.30 2.90
2575 3819 8.082242 GGCACTCAGTTTAAAAACAATAGATGT 58.918 33.333 8.21 0.00 46.82 3.06
2596 3840 6.068461 TGTTTGATAAATACTAGTGGGGCA 57.932 37.500 5.39 0.00 0.00 5.36
2660 3904 7.969536 GATCCATAAGATCTGGAATCGAAAA 57.030 36.000 6.29 0.00 46.85 2.29
2661 3905 8.383318 GATCCATAAGATCTGGAATCGAAAAA 57.617 34.615 6.29 0.00 46.85 1.94
2909 4166 9.201989 TCAGAACTAATAACATGTACTCCATCT 57.798 33.333 0.00 0.00 0.00 2.90
2921 4178 5.016173 TGTACTCCATCTTTCCCAAAATGG 58.984 41.667 0.00 0.00 37.25 3.16
2938 4195 4.895668 AATGGGTGACTCAAATTTGCAT 57.104 36.364 13.54 6.37 0.00 3.96
2941 4198 5.132897 TGGGTGACTCAAATTTGCATAAC 57.867 39.130 13.54 6.85 0.00 1.89
2942 4199 4.832266 TGGGTGACTCAAATTTGCATAACT 59.168 37.500 13.54 0.00 0.00 2.24
2945 4202 7.014711 TGGGTGACTCAAATTTGCATAACTTTA 59.985 33.333 13.54 0.00 0.00 1.85
3106 4898 1.264295 GAGTAGGGGTTGACGGTCTT 58.736 55.000 9.88 0.00 0.00 3.01
3171 4963 5.908341 AGTTTTAGAATTCTCTCGGGCTAG 58.092 41.667 12.24 0.00 32.70 3.42
3340 5137 2.804933 GCCAGAAGCTCTATGTAGCCAC 60.805 54.545 0.00 0.00 43.86 5.01
3341 5138 2.544694 CCAGAAGCTCTATGTAGCCACG 60.545 54.545 0.00 0.00 43.86 4.94
3473 5669 9.915629 CACTATAATTTGACATAGAGGGAGTAC 57.084 37.037 0.90 0.00 0.00 2.73
3667 6030 4.677779 GCTGCGTGGATTCATTGGTAATTT 60.678 41.667 0.00 0.00 0.00 1.82
3744 6107 9.942526 TCAAGGATAGCTCCATCTGATATATAA 57.057 33.333 0.00 0.00 44.79 0.98
4081 6508 3.782046 AGACAGGTTGGATTAATCGACG 58.218 45.455 9.32 0.00 0.00 5.12
4169 6596 1.075659 GCCTGGAGGAAGCAAAGGT 59.924 57.895 0.00 0.00 37.39 3.50
4173 6600 1.979155 GGAGGAAGCAAAGGTGGCC 60.979 63.158 0.00 0.00 0.00 5.36
4356 6810 6.238484 GCAATGTGATGATAACCAGTTAGACC 60.238 42.308 0.00 0.00 0.00 3.85
4441 6897 1.118965 TGGAGAAGGTGAAGCACGGA 61.119 55.000 0.00 0.00 34.83 4.69
4516 6972 2.045926 ACCAAGCGGCTCCATGAC 60.046 61.111 1.45 0.00 34.57 3.06
4563 7023 1.873178 ATAAGGTGCCCATGCCCACA 61.873 55.000 13.66 0.00 36.33 4.17
4574 7034 3.289836 CCATGCCCACACAATAAGATGA 58.710 45.455 0.00 0.00 0.00 2.92
4648 7111 6.037172 CCTTTGAGACATATTGAGTAAACGGG 59.963 42.308 0.00 0.00 0.00 5.28
4727 7203 7.943079 TGATTGATGAAGTCACCATAAACAT 57.057 32.000 0.00 0.00 36.32 2.71
4747 7223 6.111768 ACATCTCGTTGTCAATAGAAATGC 57.888 37.500 7.03 0.00 0.00 3.56
4757 7233 4.878397 GTCAATAGAAATGCTGCCTACACT 59.122 41.667 0.00 0.00 0.00 3.55
4794 7270 7.261325 CAGCTATATAGGACATACATGTGGTC 58.739 42.308 18.87 18.87 41.95 4.02
4821 7297 0.106669 GGGATTTGGCCTAGTGGACC 60.107 60.000 3.32 0.00 42.00 4.46
4836 7312 1.750297 GACCGGTACCACAACCACT 59.250 57.895 7.34 0.00 39.71 4.00
4842 7318 2.532843 GGTACCACAACCACTCTCCTA 58.467 52.381 7.15 0.00 39.50 2.94
4847 7323 3.009143 ACCACAACCACTCTCCTAATTCC 59.991 47.826 0.00 0.00 0.00 3.01
4849 7325 4.469945 CCACAACCACTCTCCTAATTCCTA 59.530 45.833 0.00 0.00 0.00 2.94
4850 7326 5.395768 CCACAACCACTCTCCTAATTCCTAG 60.396 48.000 0.00 0.00 0.00 3.02
4858 7334 3.711704 TCTCCTAATTCCTAGCCAACCAG 59.288 47.826 0.00 0.00 0.00 4.00
4911 7387 6.072008 TCCATGGATCAACACTGTTTTATGTG 60.072 38.462 11.44 0.00 39.80 3.21
4912 7388 6.072008 CCATGGATCAACACTGTTTTATGTGA 60.072 38.462 5.56 0.00 37.59 3.58
4913 7389 7.363181 CCATGGATCAACACTGTTTTATGTGAT 60.363 37.037 5.56 0.00 37.59 3.06
4914 7390 8.676401 CATGGATCAACACTGTTTTATGTGATA 58.324 33.333 0.00 0.00 37.59 2.15
4936 7412 0.972983 ATCTGTGACTGGACTCCCCG 60.973 60.000 0.00 0.00 37.93 5.73
4938 7414 2.159819 CTGTGACTGGACTCCCCGTG 62.160 65.000 0.00 0.00 37.93 4.94
4940 7416 1.078528 TGACTGGACTCCCCGTGAT 59.921 57.895 0.00 0.00 37.93 3.06
4941 7417 0.544357 TGACTGGACTCCCCGTGATT 60.544 55.000 0.00 0.00 37.93 2.57
4942 7418 0.175989 GACTGGACTCCCCGTGATTC 59.824 60.000 0.00 0.00 37.93 2.52
4943 7419 0.544357 ACTGGACTCCCCGTGATTCA 60.544 55.000 0.00 0.00 37.93 2.57
4944 7420 0.176680 CTGGACTCCCCGTGATTCAG 59.823 60.000 0.00 0.00 37.93 3.02
4949 7425 1.420138 ACTCCCCGTGATTCAGTTTGT 59.580 47.619 0.00 0.00 0.00 2.83
4967 7443 7.018826 CAGTTTGTTGTTTCTAAAACGTGAGA 58.981 34.615 0.00 0.00 37.54 3.27
4973 7449 8.666573 TGTTGTTTCTAAAACGTGAGATACAAA 58.333 29.630 21.64 14.36 41.86 2.83
4974 7450 9.659830 GTTGTTTCTAAAACGTGAGATACAAAT 57.340 29.630 21.64 0.00 41.86 2.32
4991 7467 9.672673 AGATACAAATACAACATAAGCAGAACT 57.327 29.630 0.00 0.00 0.00 3.01
4995 7471 7.448469 ACAAATACAACATAAGCAGAACTCCTT 59.552 33.333 0.00 0.00 0.00 3.36
5030 7506 1.468914 GAATTTCAGGTCCTTGTCCGC 59.531 52.381 0.00 0.00 0.00 5.54
5045 7521 2.297597 TGTCCGCCAAAATGGTAAAAGG 59.702 45.455 0.00 0.00 40.46 3.11
5051 7527 6.014499 TCCGCCAAAATGGTAAAAGGAAAATA 60.014 34.615 0.00 0.00 40.46 1.40
5086 7567 9.496873 TTTCTTACTCGGAATATTGTCAAGAAA 57.503 29.630 0.00 0.00 37.22 2.52
5101 7582 6.491394 TGTCAAGAAAATGGTAAAACGTGAG 58.509 36.000 0.00 0.00 0.00 3.51
5141 7622 7.201812 GGAATGAAGAACATATGTGTATTGCCA 60.202 37.037 9.63 2.49 37.67 4.92
5142 7623 7.643569 ATGAAGAACATATGTGTATTGCCAA 57.356 32.000 9.63 0.00 37.67 4.52
5143 7624 7.459795 TGAAGAACATATGTGTATTGCCAAA 57.540 32.000 9.63 0.00 37.67 3.28
5144 7625 7.890515 TGAAGAACATATGTGTATTGCCAAAA 58.109 30.769 9.63 0.00 37.67 2.44
5145 7626 8.363390 TGAAGAACATATGTGTATTGCCAAAAA 58.637 29.630 9.63 0.00 37.67 1.94
5146 7627 9.369904 GAAGAACATATGTGTATTGCCAAAAAT 57.630 29.630 9.63 0.00 37.67 1.82
5163 7644 9.881649 TGCCAAAAATATATTGCTATGTTTTGA 57.118 25.926 14.07 0.00 38.15 2.69
5203 7684 9.630098 AAAAACATCAGATGTACAATCATTGTC 57.370 29.630 16.71 0.00 44.07 3.18
5204 7685 7.926674 AACATCAGATGTACAATCATTGTCA 57.073 32.000 16.71 5.75 44.07 3.58
5205 7686 8.515695 AACATCAGATGTACAATCATTGTCAT 57.484 30.769 16.71 10.30 44.07 3.06
5206 7687 8.151141 ACATCAGATGTACAATCATTGTCATC 57.849 34.615 22.61 22.61 44.12 2.92
5207 7688 7.991460 ACATCAGATGTACAATCATTGTCATCT 59.009 33.333 24.91 24.91 46.77 2.90
5208 7689 8.837389 CATCAGATGTACAATCATTGTCATCTT 58.163 33.333 26.51 17.99 45.41 2.40
5209 7690 8.429493 TCAGATGTACAATCATTGTCATCTTC 57.571 34.615 26.51 17.39 45.41 2.87
5210 7691 8.042515 TCAGATGTACAATCATTGTCATCTTCA 58.957 33.333 26.51 19.11 45.41 3.02
5211 7692 8.121086 CAGATGTACAATCATTGTCATCTTCAC 58.879 37.037 26.51 13.41 45.41 3.18
5212 7693 7.825761 AGATGTACAATCATTGTCATCTTCACA 59.174 33.333 24.91 16.24 45.41 3.58
5213 7694 7.132694 TGTACAATCATTGTCATCTTCACAC 57.867 36.000 6.21 0.00 44.12 3.82
5214 7695 5.287170 ACAATCATTGTCATCTTCACACG 57.713 39.130 0.00 0.00 40.56 4.49
5215 7696 4.093514 CAATCATTGTCATCTTCACACGC 58.906 43.478 0.00 0.00 0.00 5.34
5216 7697 2.076100 TCATTGTCATCTTCACACGCC 58.924 47.619 0.00 0.00 0.00 5.68
5217 7698 2.079158 CATTGTCATCTTCACACGCCT 58.921 47.619 0.00 0.00 0.00 5.52
5218 7699 1.795768 TTGTCATCTTCACACGCCTC 58.204 50.000 0.00 0.00 0.00 4.70
5219 7700 0.678950 TGTCATCTTCACACGCCTCA 59.321 50.000 0.00 0.00 0.00 3.86
5220 7701 1.276138 TGTCATCTTCACACGCCTCAT 59.724 47.619 0.00 0.00 0.00 2.90
5221 7702 1.662629 GTCATCTTCACACGCCTCATG 59.337 52.381 0.00 0.00 0.00 3.07
5222 7703 0.376152 CATCTTCACACGCCTCATGC 59.624 55.000 0.00 0.00 0.00 4.06
5223 7704 0.745845 ATCTTCACACGCCTCATGCC 60.746 55.000 0.00 0.00 36.24 4.40
5224 7705 2.359850 TTCACACGCCTCATGCCC 60.360 61.111 0.00 0.00 36.24 5.36
5225 7706 3.189376 TTCACACGCCTCATGCCCA 62.189 57.895 0.00 0.00 36.24 5.36
5226 7707 3.434319 CACACGCCTCATGCCCAC 61.434 66.667 0.00 0.00 36.24 4.61
5229 7710 4.760047 ACGCCTCATGCCCACGTC 62.760 66.667 0.00 0.00 36.24 4.34
5231 7712 4.101448 GCCTCATGCCCACGTCCT 62.101 66.667 0.00 0.00 0.00 3.85
5232 7713 2.124983 CCTCATGCCCACGTCCTG 60.125 66.667 0.00 0.00 0.00 3.86
5233 7714 2.124983 CTCATGCCCACGTCCTGG 60.125 66.667 0.00 0.00 40.26 4.45
5238 7719 4.767255 GCCCACGTCCTGGCTCTG 62.767 72.222 11.94 0.00 44.46 3.35
5239 7720 4.767255 CCCACGTCCTGGCTCTGC 62.767 72.222 0.00 0.00 39.01 4.26
5240 7721 3.699894 CCACGTCCTGGCTCTGCT 61.700 66.667 0.00 0.00 31.36 4.24
5241 7722 2.125753 CACGTCCTGGCTCTGCTC 60.126 66.667 0.00 0.00 0.00 4.26
5242 7723 3.386237 ACGTCCTGGCTCTGCTCC 61.386 66.667 0.00 0.00 0.00 4.70
5243 7724 3.073735 CGTCCTGGCTCTGCTCCT 61.074 66.667 0.00 0.00 0.00 3.69
5244 7725 2.583520 GTCCTGGCTCTGCTCCTG 59.416 66.667 0.00 0.00 0.00 3.86
5245 7726 3.397439 TCCTGGCTCTGCTCCTGC 61.397 66.667 0.00 0.00 40.20 4.85
5246 7727 4.486503 CCTGGCTCTGCTCCTGCC 62.487 72.222 0.00 0.00 46.26 4.85
5276 7757 4.704833 GCCCTCTGCCTTGCACGA 62.705 66.667 0.00 0.00 33.79 4.35
5277 7758 2.743928 CCCTCTGCCTTGCACGAC 60.744 66.667 0.00 0.00 33.79 4.34
5278 7759 3.114616 CCTCTGCCTTGCACGACG 61.115 66.667 0.00 0.00 33.79 5.12
5279 7760 3.114616 CTCTGCCTTGCACGACGG 61.115 66.667 0.00 0.00 33.79 4.79
5280 7761 4.680237 TCTGCCTTGCACGACGGG 62.680 66.667 0.00 0.00 33.79 5.28
5281 7762 4.988598 CTGCCTTGCACGACGGGT 62.989 66.667 0.00 0.00 33.79 5.28
5282 7763 3.583276 CTGCCTTGCACGACGGGTA 62.583 63.158 0.00 0.00 33.79 3.69
5283 7764 3.116531 GCCTTGCACGACGGGTAC 61.117 66.667 0.00 0.00 0.00 3.34
5284 7765 2.340809 CCTTGCACGACGGGTACA 59.659 61.111 0.00 0.00 0.00 2.90
5285 7766 1.079405 CCTTGCACGACGGGTACAT 60.079 57.895 0.00 0.00 0.00 2.29
5286 7767 1.082117 CCTTGCACGACGGGTACATC 61.082 60.000 0.00 0.00 0.00 3.06
5287 7768 0.389296 CTTGCACGACGGGTACATCA 60.389 55.000 0.00 0.00 0.00 3.07
5288 7769 0.668096 TTGCACGACGGGTACATCAC 60.668 55.000 0.00 0.00 0.00 3.06
5295 7776 3.671262 CGGGTACATCACGCCATAA 57.329 52.632 0.00 0.00 35.72 1.90
5296 7777 1.214367 CGGGTACATCACGCCATAAC 58.786 55.000 0.00 0.00 35.72 1.89
5297 7778 1.589803 GGGTACATCACGCCATAACC 58.410 55.000 0.00 0.00 34.07 2.85
5298 7779 1.140252 GGGTACATCACGCCATAACCT 59.860 52.381 0.00 0.00 34.07 3.50
5299 7780 2.480845 GGTACATCACGCCATAACCTC 58.519 52.381 0.00 0.00 0.00 3.85
5300 7781 2.159014 GGTACATCACGCCATAACCTCA 60.159 50.000 0.00 0.00 0.00 3.86
5301 7782 2.779755 ACATCACGCCATAACCTCAA 57.220 45.000 0.00 0.00 0.00 3.02
5302 7783 2.356135 ACATCACGCCATAACCTCAAC 58.644 47.619 0.00 0.00 0.00 3.18
5303 7784 1.327460 CATCACGCCATAACCTCAACG 59.673 52.381 0.00 0.00 0.00 4.10
5304 7785 0.390603 TCACGCCATAACCTCAACGG 60.391 55.000 0.00 0.00 39.35 4.44
5305 7786 0.390603 CACGCCATAACCTCAACGGA 60.391 55.000 0.00 0.00 36.31 4.69
5306 7787 0.390735 ACGCCATAACCTCAACGGAC 60.391 55.000 0.00 0.00 36.31 4.79
5307 7788 0.390603 CGCCATAACCTCAACGGACA 60.391 55.000 0.00 0.00 36.31 4.02
5308 7789 1.369625 GCCATAACCTCAACGGACAG 58.630 55.000 0.00 0.00 36.31 3.51
5309 7790 2.012051 GCCATAACCTCAACGGACAGG 61.012 57.143 0.00 0.00 36.31 4.00
5310 7791 1.369625 CATAACCTCAACGGACAGGC 58.630 55.000 0.00 0.00 36.31 4.85
5311 7792 0.252197 ATAACCTCAACGGACAGGCC 59.748 55.000 0.00 0.00 36.31 5.19
5312 7793 1.122632 TAACCTCAACGGACAGGCCA 61.123 55.000 5.01 0.00 35.94 5.36
5313 7794 2.358737 CCTCAACGGACAGGCCAC 60.359 66.667 5.01 0.00 35.94 5.01
5314 7795 2.743718 CTCAACGGACAGGCCACT 59.256 61.111 5.01 0.00 35.94 4.00
5315 7796 1.541310 CCTCAACGGACAGGCCACTA 61.541 60.000 5.01 0.00 35.94 2.74
5316 7797 0.320374 CTCAACGGACAGGCCACTAA 59.680 55.000 5.01 0.00 35.94 2.24
5317 7798 0.320374 TCAACGGACAGGCCACTAAG 59.680 55.000 5.01 0.00 35.94 2.18
5318 7799 0.673644 CAACGGACAGGCCACTAAGG 60.674 60.000 5.01 0.00 41.84 2.69
5319 7800 1.838073 AACGGACAGGCCACTAAGGG 61.838 60.000 5.01 0.00 38.09 3.95
5331 7812 2.422127 CCACTAAGGGCATTTACCAACG 59.578 50.000 0.00 0.00 0.00 4.10
5332 7813 3.340034 CACTAAGGGCATTTACCAACGA 58.660 45.455 0.00 0.00 0.00 3.85
5333 7814 3.754323 CACTAAGGGCATTTACCAACGAA 59.246 43.478 0.00 0.00 0.00 3.85
5334 7815 4.007659 ACTAAGGGCATTTACCAACGAAG 58.992 43.478 0.00 0.00 0.00 3.79
5335 7816 1.834188 AGGGCATTTACCAACGAAGG 58.166 50.000 0.00 0.00 0.00 3.46
5336 7817 0.815095 GGGCATTTACCAACGAAGGG 59.185 55.000 0.00 0.00 0.00 3.95
5337 7818 0.815095 GGCATTTACCAACGAAGGGG 59.185 55.000 0.00 0.00 0.00 4.79
5338 7819 0.172578 GCATTTACCAACGAAGGGGC 59.827 55.000 0.00 0.00 0.00 5.80
5339 7820 1.834188 CATTTACCAACGAAGGGGCT 58.166 50.000 0.00 0.00 0.00 5.19
5340 7821 2.942306 GCATTTACCAACGAAGGGGCTA 60.942 50.000 0.00 0.00 0.00 3.93
5341 7822 3.551846 CATTTACCAACGAAGGGGCTAT 58.448 45.455 0.00 0.00 0.00 2.97
5342 7823 2.702592 TTACCAACGAAGGGGCTATG 57.297 50.000 0.00 0.00 0.00 2.23
5343 7824 0.179468 TACCAACGAAGGGGCTATGC 59.821 55.000 0.00 0.00 0.00 3.14
5344 7825 1.224592 CCAACGAAGGGGCTATGCT 59.775 57.895 0.00 0.00 0.00 3.79
5345 7826 0.394352 CCAACGAAGGGGCTATGCTT 60.394 55.000 0.00 0.00 0.00 3.91
5346 7827 1.017387 CAACGAAGGGGCTATGCTTC 58.983 55.000 0.00 0.00 0.00 3.86
5347 7828 0.107165 AACGAAGGGGCTATGCTTCC 60.107 55.000 0.00 0.00 0.00 3.46
5348 7829 1.271840 ACGAAGGGGCTATGCTTCCA 61.272 55.000 0.00 0.00 0.00 3.53
5349 7830 0.815615 CGAAGGGGCTATGCTTCCAC 60.816 60.000 0.00 0.00 0.00 4.02
5350 7831 0.466372 GAAGGGGCTATGCTTCCACC 60.466 60.000 0.00 0.00 0.00 4.61
5351 7832 1.214305 AAGGGGCTATGCTTCCACCA 61.214 55.000 0.00 0.00 0.00 4.17
5352 7833 0.995675 AGGGGCTATGCTTCCACCAT 60.996 55.000 0.00 0.00 0.00 3.55
5353 7834 0.825010 GGGGCTATGCTTCCACCATG 60.825 60.000 0.00 0.00 0.00 3.66
5354 7835 0.825010 GGGCTATGCTTCCACCATGG 60.825 60.000 11.19 11.19 39.43 3.66
5355 7836 1.458639 GGCTATGCTTCCACCATGGC 61.459 60.000 13.04 0.00 43.74 4.40
5356 7837 0.466922 GCTATGCTTCCACCATGGCT 60.467 55.000 13.04 0.00 41.97 4.75
5357 7838 2.025863 GCTATGCTTCCACCATGGCTT 61.026 52.381 13.04 0.00 41.97 4.35
5358 7839 2.381911 CTATGCTTCCACCATGGCTTT 58.618 47.619 13.04 0.00 37.47 3.51
5359 7840 1.648116 ATGCTTCCACCATGGCTTTT 58.352 45.000 13.04 0.00 37.47 2.27
5360 7841 0.680618 TGCTTCCACCATGGCTTTTG 59.319 50.000 13.04 1.81 37.47 2.44
5361 7842 0.968405 GCTTCCACCATGGCTTTTGA 59.032 50.000 13.04 0.00 37.47 2.69
5362 7843 1.344114 GCTTCCACCATGGCTTTTGAA 59.656 47.619 13.04 6.73 37.47 2.69
5363 7844 2.867647 GCTTCCACCATGGCTTTTGAAC 60.868 50.000 13.04 0.18 37.47 3.18
5364 7845 0.958091 TCCACCATGGCTTTTGAACG 59.042 50.000 13.04 0.00 37.47 3.95
5365 7846 0.667184 CCACCATGGCTTTTGAACGC 60.667 55.000 13.04 0.00 0.00 4.84
5366 7847 0.667184 CACCATGGCTTTTGAACGCC 60.667 55.000 13.04 4.44 46.46 5.68
5370 7851 4.944249 GGCTTTTGAACGCCAGAC 57.056 55.556 6.39 0.00 45.59 3.51
5381 7862 3.936203 GCCAGACGGACCACACCA 61.936 66.667 0.00 0.00 0.00 4.17
5382 7863 2.030562 CCAGACGGACCACACCAC 59.969 66.667 0.00 0.00 0.00 4.16
5383 7864 2.030562 CAGACGGACCACACCACC 59.969 66.667 0.00 0.00 0.00 4.61
5384 7865 2.122989 AGACGGACCACACCACCT 60.123 61.111 0.00 0.00 0.00 4.00
5385 7866 1.764854 AGACGGACCACACCACCTT 60.765 57.895 0.00 0.00 0.00 3.50
5386 7867 1.301479 GACGGACCACACCACCTTC 60.301 63.158 0.00 0.00 0.00 3.46
5387 7868 2.035237 GACGGACCACACCACCTTCA 62.035 60.000 0.00 0.00 0.00 3.02
5388 7869 1.147376 CGGACCACACCACCTTCAA 59.853 57.895 0.00 0.00 0.00 2.69
5389 7870 1.164041 CGGACCACACCACCTTCAAC 61.164 60.000 0.00 0.00 0.00 3.18
5390 7871 0.106918 GGACCACACCACCTTCAACA 60.107 55.000 0.00 0.00 0.00 3.33
5391 7872 1.683629 GGACCACACCACCTTCAACAA 60.684 52.381 0.00 0.00 0.00 2.83
5392 7873 1.676006 GACCACACCACCTTCAACAAG 59.324 52.381 0.00 0.00 0.00 3.16
5400 7881 1.288127 CCTTCAACAAGGCAGCAGC 59.712 57.895 0.00 0.00 43.14 5.25
5401 7882 1.081641 CTTCAACAAGGCAGCAGCG 60.082 57.895 0.00 0.00 43.41 5.18
5402 7883 1.509644 CTTCAACAAGGCAGCAGCGA 61.510 55.000 0.00 0.00 43.41 4.93
5403 7884 1.785041 TTCAACAAGGCAGCAGCGAC 61.785 55.000 0.00 0.00 43.41 5.19
5404 7885 3.349006 AACAAGGCAGCAGCGACG 61.349 61.111 0.00 0.00 43.41 5.12
5423 7904 4.467084 GCCTCGTGCCGGATCCAA 62.467 66.667 13.41 0.00 0.00 3.53
5424 7905 2.202932 CCTCGTGCCGGATCCAAG 60.203 66.667 13.41 3.20 0.00 3.61
5425 7906 2.579201 CTCGTGCCGGATCCAAGT 59.421 61.111 13.41 0.00 0.00 3.16
5426 7907 1.811266 CTCGTGCCGGATCCAAGTG 60.811 63.158 13.41 0.00 0.00 3.16
5427 7908 3.499737 CGTGCCGGATCCAAGTGC 61.500 66.667 13.41 8.97 0.00 4.40
5428 7909 3.134127 GTGCCGGATCCAAGTGCC 61.134 66.667 13.41 0.00 0.00 5.01
5429 7910 3.645660 TGCCGGATCCAAGTGCCA 61.646 61.111 13.41 0.00 0.00 4.92
5430 7911 2.124151 GCCGGATCCAAGTGCCAT 60.124 61.111 13.41 0.00 0.00 4.40
5431 7912 1.754234 GCCGGATCCAAGTGCCATT 60.754 57.895 13.41 0.00 0.00 3.16
5432 7913 1.322538 GCCGGATCCAAGTGCCATTT 61.323 55.000 13.41 0.00 0.00 2.32
5433 7914 0.457035 CCGGATCCAAGTGCCATTTG 59.543 55.000 13.41 0.00 0.00 2.32
5434 7915 1.176527 CGGATCCAAGTGCCATTTGT 58.823 50.000 13.41 0.00 0.00 2.83
5435 7916 2.364632 CGGATCCAAGTGCCATTTGTA 58.635 47.619 13.41 0.00 0.00 2.41
5436 7917 2.097466 CGGATCCAAGTGCCATTTGTAC 59.903 50.000 13.41 0.00 0.00 2.90
5437 7918 2.097466 GGATCCAAGTGCCATTTGTACG 59.903 50.000 6.95 0.00 34.34 3.67
5438 7919 1.529226 TCCAAGTGCCATTTGTACGG 58.471 50.000 0.00 0.00 34.34 4.02
5439 7920 1.072489 TCCAAGTGCCATTTGTACGGA 59.928 47.619 0.00 0.00 34.34 4.69
5440 7921 1.199097 CCAAGTGCCATTTGTACGGAC 59.801 52.381 0.00 0.00 34.34 4.79
5441 7922 1.136085 CAAGTGCCATTTGTACGGACG 60.136 52.381 0.00 0.00 34.34 4.79
5442 7923 1.133869 GTGCCATTTGTACGGACGC 59.866 57.895 0.00 0.00 0.00 5.19
5443 7924 1.004320 TGCCATTTGTACGGACGCT 60.004 52.632 0.00 0.00 0.00 5.07
5444 7925 0.246910 TGCCATTTGTACGGACGCTA 59.753 50.000 0.00 0.00 0.00 4.26
5445 7926 1.134640 TGCCATTTGTACGGACGCTAT 60.135 47.619 0.00 0.00 0.00 2.97
5446 7927 2.101082 TGCCATTTGTACGGACGCTATA 59.899 45.455 0.00 0.00 0.00 1.31
5447 7928 2.729882 GCCATTTGTACGGACGCTATAG 59.270 50.000 0.00 0.00 0.00 1.31
5448 7929 3.551454 GCCATTTGTACGGACGCTATAGA 60.551 47.826 3.21 0.00 0.00 1.98
5449 7930 4.806330 CCATTTGTACGGACGCTATAGAT 58.194 43.478 3.21 0.00 0.00 1.98
5450 7931 5.227908 CCATTTGTACGGACGCTATAGATT 58.772 41.667 3.21 0.00 0.00 2.40
5451 7932 5.694910 CCATTTGTACGGACGCTATAGATTT 59.305 40.000 3.21 0.00 0.00 2.17
5452 7933 6.128902 CCATTTGTACGGACGCTATAGATTTC 60.129 42.308 3.21 0.00 0.00 2.17
5453 7934 4.494350 TGTACGGACGCTATAGATTTCC 57.506 45.455 3.21 4.42 0.00 3.13
5455 7936 1.337821 CGGACGCTATAGATTTCCGC 58.662 55.000 18.54 4.35 42.51 5.54
5456 7937 1.711206 GGACGCTATAGATTTCCGCC 58.289 55.000 3.21 0.01 0.00 6.13
5457 7938 1.272769 GGACGCTATAGATTTCCGCCT 59.727 52.381 3.21 0.00 0.00 5.52
5458 7939 2.329379 GACGCTATAGATTTCCGCCTG 58.671 52.381 3.21 0.00 0.00 4.85
5459 7940 1.961394 ACGCTATAGATTTCCGCCTGA 59.039 47.619 3.21 0.00 0.00 3.86
5460 7941 2.563179 ACGCTATAGATTTCCGCCTGAT 59.437 45.455 3.21 0.00 0.00 2.90
5461 7942 3.182967 CGCTATAGATTTCCGCCTGATC 58.817 50.000 3.21 0.00 0.00 2.92
5462 7943 3.182967 GCTATAGATTTCCGCCTGATCG 58.817 50.000 3.21 0.00 0.00 3.69
5463 7944 3.119459 GCTATAGATTTCCGCCTGATCGA 60.119 47.826 3.21 0.00 0.00 3.59
5464 7945 3.584406 ATAGATTTCCGCCTGATCGAG 57.416 47.619 0.00 0.00 0.00 4.04
5465 7946 1.115467 AGATTTCCGCCTGATCGAGT 58.885 50.000 0.00 0.00 0.00 4.18
5466 7947 1.067821 AGATTTCCGCCTGATCGAGTC 59.932 52.381 0.00 0.00 0.00 3.36
5467 7948 1.067821 GATTTCCGCCTGATCGAGTCT 59.932 52.381 0.00 0.00 0.00 3.24
5468 7949 0.173481 TTTCCGCCTGATCGAGTCTG 59.827 55.000 0.00 0.00 0.00 3.51
5469 7950 0.679960 TTCCGCCTGATCGAGTCTGA 60.680 55.000 0.00 0.00 0.00 3.27
5470 7951 1.064946 CCGCCTGATCGAGTCTGAC 59.935 63.158 0.00 0.00 0.00 3.51
5471 7952 1.064946 CGCCTGATCGAGTCTGACC 59.935 63.158 3.76 0.00 0.00 4.02
5472 7953 1.064946 GCCTGATCGAGTCTGACCG 59.935 63.158 3.76 8.14 0.00 4.79
5473 7954 1.064946 CCTGATCGAGTCTGACCGC 59.935 63.158 3.76 0.00 0.00 5.68
5474 7955 1.380403 CCTGATCGAGTCTGACCGCT 61.380 60.000 3.76 0.00 0.00 5.52
5475 7956 0.248417 CTGATCGAGTCTGACCGCTG 60.248 60.000 3.76 0.00 0.00 5.18
5476 7957 0.960861 TGATCGAGTCTGACCGCTGT 60.961 55.000 3.76 0.00 0.00 4.40
5477 7958 1.015109 GATCGAGTCTGACCGCTGTA 58.985 55.000 3.76 0.00 0.00 2.74
5478 7959 1.604755 GATCGAGTCTGACCGCTGTAT 59.395 52.381 3.76 0.00 0.00 2.29
5479 7960 0.733150 TCGAGTCTGACCGCTGTATG 59.267 55.000 3.76 0.00 0.00 2.39
5480 7961 0.248661 CGAGTCTGACCGCTGTATGG 60.249 60.000 3.76 0.00 0.00 2.74
5481 7962 0.528684 GAGTCTGACCGCTGTATGGC 60.529 60.000 3.76 0.00 0.00 4.40
5482 7963 1.218047 GTCTGACCGCTGTATGGCA 59.782 57.895 0.00 0.00 0.00 4.92
5483 7964 0.179073 GTCTGACCGCTGTATGGCAT 60.179 55.000 4.88 4.88 0.00 4.40
5484 7965 0.541392 TCTGACCGCTGTATGGCATT 59.459 50.000 4.78 0.00 0.00 3.56
5485 7966 0.940126 CTGACCGCTGTATGGCATTC 59.060 55.000 4.78 0.00 0.00 2.67
5486 7967 0.541392 TGACCGCTGTATGGCATTCT 59.459 50.000 4.78 0.00 0.00 2.40
5487 7968 1.221414 GACCGCTGTATGGCATTCTC 58.779 55.000 4.78 0.00 0.00 2.87
5488 7969 0.179045 ACCGCTGTATGGCATTCTCC 60.179 55.000 4.78 0.00 0.00 3.71
5489 7970 0.107456 CCGCTGTATGGCATTCTCCT 59.893 55.000 4.78 0.00 0.00 3.69
5490 7971 1.475751 CCGCTGTATGGCATTCTCCTT 60.476 52.381 4.78 0.00 0.00 3.36
5491 7972 2.224281 CCGCTGTATGGCATTCTCCTTA 60.224 50.000 4.78 0.00 0.00 2.69
5492 7973 2.802816 CGCTGTATGGCATTCTCCTTAC 59.197 50.000 4.78 0.00 37.30 2.34
5493 7974 2.802816 GCTGTATGGCATTCTCCTTACG 59.197 50.000 4.78 0.00 38.73 3.18
5494 7975 3.393800 CTGTATGGCATTCTCCTTACGG 58.606 50.000 4.78 0.00 38.73 4.02
5495 7976 2.104111 TGTATGGCATTCTCCTTACGGG 59.896 50.000 4.78 0.00 38.73 5.28
5496 7977 1.213296 ATGGCATTCTCCTTACGGGT 58.787 50.000 0.00 0.00 36.25 5.28
5497 7978 0.251916 TGGCATTCTCCTTACGGGTG 59.748 55.000 0.00 0.00 36.25 4.61
5498 7979 1.095807 GGCATTCTCCTTACGGGTGC 61.096 60.000 0.00 0.00 36.25 5.01
5499 7980 1.429148 GCATTCTCCTTACGGGTGCG 61.429 60.000 0.00 0.00 36.25 5.34
5500 7981 0.810031 CATTCTCCTTACGGGTGCGG 60.810 60.000 0.00 0.00 36.25 5.69
5501 7982 1.968050 ATTCTCCTTACGGGTGCGGG 61.968 60.000 0.00 0.00 36.25 6.13
5502 7983 3.387947 CTCCTTACGGGTGCGGGT 61.388 66.667 0.00 0.00 36.25 5.28
5503 7984 3.659089 CTCCTTACGGGTGCGGGTG 62.659 68.421 0.00 0.00 36.25 4.61
5504 7985 4.770874 CCTTACGGGTGCGGGTGG 62.771 72.222 0.00 0.00 0.00 4.61
5505 7986 3.697747 CTTACGGGTGCGGGTGGA 61.698 66.667 0.00 0.00 0.00 4.02
5506 7987 3.659089 CTTACGGGTGCGGGTGGAG 62.659 68.421 0.00 0.00 0.00 3.86
5510 7991 3.792736 GGGTGCGGGTGGAGCATA 61.793 66.667 0.00 0.00 46.96 3.14
5511 7992 2.270850 GGTGCGGGTGGAGCATAA 59.729 61.111 0.00 0.00 46.96 1.90
5512 7993 2.112815 GGTGCGGGTGGAGCATAAC 61.113 63.158 0.00 0.00 46.96 1.89
5513 7994 1.078426 GTGCGGGTGGAGCATAACT 60.078 57.895 0.00 0.00 46.96 2.24
5514 7995 1.090052 GTGCGGGTGGAGCATAACTC 61.090 60.000 0.00 0.00 46.96 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 5.303078 AGTTACTCTCTCTGCTTTTGTCTGA 59.697 40.000 0.00 0.00 0.00 3.27
38 39 6.816140 GCATTTAGAAAGTTACTCTCTCTGCT 59.184 38.462 9.24 0.00 0.00 4.24
166 300 0.109179 GTGGGATGCACGTACGTACA 60.109 55.000 22.64 22.64 0.00 2.90
233 377 3.958147 TCGTATGCTCTCTTATCCACCAA 59.042 43.478 0.00 0.00 0.00 3.67
251 395 1.079405 CCAAAAGGCCTCGCTCGTA 60.079 57.895 5.23 0.00 0.00 3.43
258 402 1.746991 CCGAGAGCCAAAAGGCCTC 60.747 63.158 5.23 8.56 35.12 4.70
361 507 9.314321 ACGAAATTTTAGTCACATCTAGTATGG 57.686 33.333 0.00 0.00 0.00 2.74
390 541 4.799949 CAGCCCACATCAAAATGTATTTCG 59.200 41.667 0.00 0.00 44.41 3.46
539 816 8.478775 AAGTACACATATGCCTATAGAGTTGA 57.521 34.615 1.58 0.00 0.00 3.18
540 817 9.547753 AAAAGTACACATATGCCTATAGAGTTG 57.452 33.333 1.58 0.00 0.00 3.16
638 915 5.438761 ACTGTGTTTGAGAATTGCTAACC 57.561 39.130 0.00 0.00 0.00 2.85
639 916 7.639945 ACTTACTGTGTTTGAGAATTGCTAAC 58.360 34.615 0.00 0.00 0.00 2.34
661 938 9.736414 TGTGAAGAGTACTAGTATTACTGACTT 57.264 33.333 5.75 2.37 29.58 3.01
662 939 9.386010 CTGTGAAGAGTACTAGTATTACTGACT 57.614 37.037 5.75 7.01 29.58 3.41
663 940 9.165035 ACTGTGAAGAGTACTAGTATTACTGAC 57.835 37.037 5.75 7.36 29.58 3.51
676 953 7.172019 GGAGTAGAGCTATACTGTGAAGAGTAC 59.828 44.444 25.07 6.84 36.13 2.73
686 963 8.941977 CACTATGTTAGGAGTAGAGCTATACTG 58.058 40.741 25.07 9.97 36.13 2.74
761 1163 0.927994 CGCGATCTCTTCTCGACTGC 60.928 60.000 0.00 0.00 38.38 4.40
770 1172 2.590007 GGCCATGCGCGATCTCTT 60.590 61.111 12.10 0.00 38.94 2.85
800 1202 3.382546 GCTCCATGTGCAAATATTCTGGT 59.617 43.478 0.00 0.00 0.00 4.00
852 1254 1.959282 GGGGAGGCAGCATTTCATTAG 59.041 52.381 0.00 0.00 0.00 1.73
888 1290 4.091549 GGTAGGGTTTAAAAAGGGAAGGG 58.908 47.826 0.00 0.00 0.00 3.95
983 1385 2.999485 ATCGCGACTGAGCTGCTGT 61.999 57.895 12.93 0.00 34.40 4.40
1009 1415 0.622738 AGTGAGTGGATGCCCAGGAT 60.623 55.000 0.00 0.00 44.55 3.24
1010 1416 0.842030 AAGTGAGTGGATGCCCAGGA 60.842 55.000 0.00 0.00 44.55 3.86
1067 1479 2.108514 CGGCCAAGCACGATGTCAT 61.109 57.895 2.24 0.00 0.00 3.06
1068 1480 2.741985 CGGCCAAGCACGATGTCA 60.742 61.111 2.24 0.00 0.00 3.58
1301 1713 8.352942 GGGATAATTAAGGCAACAAGAACATAG 58.647 37.037 0.00 0.00 41.41 2.23
1451 1871 4.783764 CCAAGTTTAATGGGTGTTCTCC 57.216 45.455 0.00 0.00 34.15 3.71
1552 2161 2.158325 TGGCCCAGAGGAGAAAACAATT 60.158 45.455 0.00 0.00 33.47 2.32
1601 2272 1.336440 CCTATGAGTCTGAGTCCAGCG 59.664 57.143 9.88 0.00 40.20 5.18
1631 2302 1.887320 CTTCAAGAATTTGCTCCGCG 58.113 50.000 0.00 0.00 34.21 6.46
1710 2383 4.557205 ACAGCTGTTAAAACGAGACTAGG 58.443 43.478 15.25 0.00 0.00 3.02
2019 3000 2.280628 GCGTACTCTCCTCCCAATTTG 58.719 52.381 0.00 0.00 0.00 2.32
2043 3024 4.020573 CCAAGGTCAATCACACCTACTGTA 60.021 45.833 0.00 0.00 44.03 2.74
2070 3051 4.114997 GCCATTTGCACGGACCCG 62.115 66.667 6.94 6.94 46.03 5.28
2088 3069 3.067601 CAGCATCTGCAGAAATGGCATAA 59.932 43.478 22.50 0.00 45.16 1.90
2124 3105 4.829872 AACATACGGATCCTTAACCACA 57.170 40.909 10.75 0.00 0.00 4.17
2206 3187 9.866655 ATAAAATAACCAAGGATATTCTGAGCA 57.133 29.630 2.60 0.00 0.00 4.26
2288 3305 7.903995 TTAAAAATTCACCATTGATCAAGGC 57.096 32.000 14.55 0.00 0.00 4.35
2303 3320 9.891828 CCTGCAACCCTTTTTAATTAAAAATTC 57.108 29.630 27.76 13.82 42.30 2.17
2306 3323 6.828785 TGCCTGCAACCCTTTTTAATTAAAAA 59.171 30.769 26.52 26.52 41.36 1.94
2310 3327 4.591072 AGTGCCTGCAACCCTTTTTAATTA 59.409 37.500 0.00 0.00 0.00 1.40
2313 3330 2.364002 GAGTGCCTGCAACCCTTTTTAA 59.636 45.455 0.00 0.00 0.00 1.52
2373 3617 1.660560 ATTCCTCACATGCCGCTTGC 61.661 55.000 6.18 0.00 41.77 4.01
2378 3622 4.816385 ACTTTGTATATTCCTCACATGCCG 59.184 41.667 0.00 0.00 0.00 5.69
2381 3625 7.554118 AGGTTGACTTTGTATATTCCTCACATG 59.446 37.037 0.00 0.00 0.00 3.21
2420 3664 7.886970 TCAATCTTGTTTGATTCCAGATCTTCT 59.113 33.333 0.00 0.00 34.77 2.85
2427 3671 6.187125 ACGATCAATCTTGTTTGATTCCAG 57.813 37.500 7.93 4.61 44.35 3.86
2449 3693 6.655930 TCCCAACCAAATATACTGTAAGGAC 58.344 40.000 0.00 0.00 39.30 3.85
2451 3695 7.948034 TTTCCCAACCAAATATACTGTAAGG 57.052 36.000 0.00 0.00 39.30 2.69
2452 3696 9.408648 AGATTTCCCAACCAAATATACTGTAAG 57.591 33.333 0.00 0.00 42.29 2.34
2455 3699 9.762381 TTTAGATTTCCCAACCAAATATACTGT 57.238 29.630 0.00 0.00 0.00 3.55
2462 3706 9.320295 TCTTGTATTTAGATTTCCCAACCAAAT 57.680 29.630 0.00 0.00 0.00 2.32
2463 3707 8.713708 TCTTGTATTTAGATTTCCCAACCAAA 57.286 30.769 0.00 0.00 0.00 3.28
2464 3708 8.893563 ATCTTGTATTTAGATTTCCCAACCAA 57.106 30.769 0.00 0.00 0.00 3.67
2465 3709 9.627123 CTATCTTGTATTTAGATTTCCCAACCA 57.373 33.333 0.00 0.00 34.35 3.67
2466 3710 9.847224 TCTATCTTGTATTTAGATTTCCCAACC 57.153 33.333 0.00 0.00 34.35 3.77
2516 3760 9.077885 ACATTTTTGCACCTCTCTATTCTAAAA 57.922 29.630 0.00 0.00 0.00 1.52
2517 3761 8.514594 CACATTTTTGCACCTCTCTATTCTAAA 58.485 33.333 0.00 0.00 0.00 1.85
2518 3762 7.665559 ACACATTTTTGCACCTCTCTATTCTAA 59.334 33.333 0.00 0.00 0.00 2.10
2519 3763 7.168219 ACACATTTTTGCACCTCTCTATTCTA 58.832 34.615 0.00 0.00 0.00 2.10
2520 3764 6.006449 ACACATTTTTGCACCTCTCTATTCT 58.994 36.000 0.00 0.00 0.00 2.40
2521 3765 6.259550 ACACATTTTTGCACCTCTCTATTC 57.740 37.500 0.00 0.00 0.00 1.75
2522 3766 6.449698 CAACACATTTTTGCACCTCTCTATT 58.550 36.000 0.00 0.00 0.00 1.73
2523 3767 6.017400 CAACACATTTTTGCACCTCTCTAT 57.983 37.500 0.00 0.00 0.00 1.98
2524 3768 5.437289 CAACACATTTTTGCACCTCTCTA 57.563 39.130 0.00 0.00 0.00 2.43
2525 3769 4.311816 CAACACATTTTTGCACCTCTCT 57.688 40.909 0.00 0.00 0.00 3.10
2534 3778 2.540931 GAGTGCCTGCAACACATTTTTG 59.459 45.455 18.73 0.00 40.59 2.44
2535 3779 2.168106 TGAGTGCCTGCAACACATTTTT 59.832 40.909 18.73 1.10 40.59 1.94
2536 3780 1.755959 TGAGTGCCTGCAACACATTTT 59.244 42.857 18.73 1.43 40.59 1.82
2537 3781 1.338973 CTGAGTGCCTGCAACACATTT 59.661 47.619 18.73 1.74 40.59 2.32
2538 3782 0.956633 CTGAGTGCCTGCAACACATT 59.043 50.000 18.73 2.38 40.59 2.71
2539 3783 0.179009 ACTGAGTGCCTGCAACACAT 60.179 50.000 18.73 6.71 40.59 3.21
2540 3784 0.394216 AACTGAGTGCCTGCAACACA 60.394 50.000 18.73 4.91 40.59 3.72
2541 3785 0.740737 AAACTGAGTGCCTGCAACAC 59.259 50.000 10.77 10.77 38.35 3.32
2542 3786 2.340210 TAAACTGAGTGCCTGCAACA 57.660 45.000 0.00 0.00 0.00 3.33
2543 3787 3.708563 TTTAAACTGAGTGCCTGCAAC 57.291 42.857 0.00 0.00 0.00 4.17
2544 3788 4.081972 TGTTTTTAAACTGAGTGCCTGCAA 60.082 37.500 6.87 0.00 39.59 4.08
2545 3789 3.445450 TGTTTTTAAACTGAGTGCCTGCA 59.555 39.130 6.87 0.00 39.59 4.41
2546 3790 4.040445 TGTTTTTAAACTGAGTGCCTGC 57.960 40.909 6.87 0.00 39.59 4.85
2547 3791 7.648142 TCTATTGTTTTTAAACTGAGTGCCTG 58.352 34.615 6.87 0.00 39.59 4.85
2548 3792 7.817418 TCTATTGTTTTTAAACTGAGTGCCT 57.183 32.000 6.87 0.00 39.59 4.75
2549 3793 8.082242 ACATCTATTGTTTTTAAACTGAGTGCC 58.918 33.333 6.87 0.00 39.59 5.01
2550 3794 9.463443 AACATCTATTGTTTTTAAACTGAGTGC 57.537 29.630 6.87 0.00 46.51 4.40
2569 3813 8.154856 GCCCCACTAGTATTTATCAAACATCTA 58.845 37.037 0.00 0.00 0.00 1.98
2570 3814 6.998673 GCCCCACTAGTATTTATCAAACATCT 59.001 38.462 0.00 0.00 0.00 2.90
2571 3815 6.770785 TGCCCCACTAGTATTTATCAAACATC 59.229 38.462 0.00 0.00 0.00 3.06
2572 3816 6.668645 TGCCCCACTAGTATTTATCAAACAT 58.331 36.000 0.00 0.00 0.00 2.71
2573 3817 6.068461 TGCCCCACTAGTATTTATCAAACA 57.932 37.500 0.00 0.00 0.00 2.83
2574 3818 7.255569 GTTTGCCCCACTAGTATTTATCAAAC 58.744 38.462 15.33 15.33 34.85 2.93
2575 3819 6.094325 CGTTTGCCCCACTAGTATTTATCAAA 59.906 38.462 0.00 0.00 0.00 2.69
2576 3820 5.587043 CGTTTGCCCCACTAGTATTTATCAA 59.413 40.000 0.00 0.00 0.00 2.57
2577 3821 5.120399 CGTTTGCCCCACTAGTATTTATCA 58.880 41.667 0.00 0.00 0.00 2.15
2578 3822 4.514066 CCGTTTGCCCCACTAGTATTTATC 59.486 45.833 0.00 0.00 0.00 1.75
2579 3823 4.457466 CCGTTTGCCCCACTAGTATTTAT 58.543 43.478 0.00 0.00 0.00 1.40
2580 3824 3.876341 CCGTTTGCCCCACTAGTATTTA 58.124 45.455 0.00 0.00 0.00 1.40
2581 3825 2.718563 CCGTTTGCCCCACTAGTATTT 58.281 47.619 0.00 0.00 0.00 1.40
2582 3826 1.680860 GCCGTTTGCCCCACTAGTATT 60.681 52.381 0.00 0.00 0.00 1.89
2583 3827 0.107361 GCCGTTTGCCCCACTAGTAT 60.107 55.000 0.00 0.00 0.00 2.12
2584 3828 1.297364 GCCGTTTGCCCCACTAGTA 59.703 57.895 0.00 0.00 0.00 1.82
2585 3829 2.033602 GCCGTTTGCCCCACTAGT 59.966 61.111 0.00 0.00 0.00 2.57
2586 3830 1.378514 ATGCCGTTTGCCCCACTAG 60.379 57.895 0.00 0.00 40.16 2.57
2587 3831 1.677300 CATGCCGTTTGCCCCACTA 60.677 57.895 0.00 0.00 40.16 2.74
2588 3832 2.990967 CATGCCGTTTGCCCCACT 60.991 61.111 0.00 0.00 40.16 4.00
2589 3833 2.988684 TCATGCCGTTTGCCCCAC 60.989 61.111 0.00 0.00 40.16 4.61
2590 3834 2.676121 CTCATGCCGTTTGCCCCA 60.676 61.111 0.00 0.00 40.16 4.96
2591 3835 1.937546 CTTCTCATGCCGTTTGCCCC 61.938 60.000 0.00 0.00 40.16 5.80
2596 3840 7.336931 ACTTTGTATATTCTTCTCATGCCGTTT 59.663 33.333 0.00 0.00 0.00 3.60
2658 3902 9.485206 CAATCTTGTTTGATTCCAGATCTTTTT 57.515 29.630 0.00 0.00 34.77 1.94
2659 3903 8.863086 TCAATCTTGTTTGATTCCAGATCTTTT 58.137 29.630 0.00 0.00 34.77 2.27
2660 3904 8.413309 TCAATCTTGTTTGATTCCAGATCTTT 57.587 30.769 0.00 0.00 34.77 2.52
2661 3905 8.591114 ATCAATCTTGTTTGATTCCAGATCTT 57.409 30.769 0.00 0.00 42.29 2.40
2871 4128 8.296713 TGTTATTAGTTCTGATTCTGGTTTTGC 58.703 33.333 0.00 0.00 0.00 3.68
2921 4178 8.810652 TTAAAGTTATGCAAATTTGAGTCACC 57.189 30.769 22.31 3.44 34.12 4.02
2931 4188 9.995003 TTCCACTGATTTTAAAGTTATGCAAAT 57.005 25.926 0.00 0.00 0.00 2.32
2938 4195 8.458573 TCAGCTTTCCACTGATTTTAAAGTTA 57.541 30.769 0.00 0.00 39.21 2.24
2941 4198 6.974965 ACTCAGCTTTCCACTGATTTTAAAG 58.025 36.000 0.00 0.00 42.99 1.85
2942 4199 6.545666 TGACTCAGCTTTCCACTGATTTTAAA 59.454 34.615 0.00 0.00 42.99 1.52
2945 4202 4.276926 GTGACTCAGCTTTCCACTGATTTT 59.723 41.667 0.00 0.00 42.99 1.82
2949 4206 2.042464 AGTGACTCAGCTTTCCACTGA 58.958 47.619 6.92 0.00 41.78 3.41
2950 4207 2.540265 AGTGACTCAGCTTTCCACTG 57.460 50.000 6.92 0.00 36.80 3.66
2955 4213 5.473504 TCCCAAAATAAGTGACTCAGCTTTC 59.526 40.000 0.00 0.00 0.00 2.62
3032 4290 9.996554 TTATAATATACCACACATCTTCCACTG 57.003 33.333 0.00 0.00 0.00 3.66
3073 4865 2.163613 CCCTACTCCGAAACCATTTTGC 59.836 50.000 0.00 0.00 0.00 3.68
3117 4909 7.451255 TGTTTATTGCATTAGCCTATATGCCTT 59.549 33.333 12.96 6.34 45.03 4.35
3118 4910 6.947733 TGTTTATTGCATTAGCCTATATGCCT 59.052 34.615 12.96 6.46 45.03 4.75
3119 4911 7.121168 TCTGTTTATTGCATTAGCCTATATGCC 59.879 37.037 12.96 2.40 45.03 4.40
3124 4916 8.971073 ACTTTTCTGTTTATTGCATTAGCCTAT 58.029 29.630 0.00 0.00 41.13 2.57
3473 5669 7.809331 TCAAGTAGTCAAATAATGCAAGCAAAG 59.191 33.333 0.00 0.00 0.00 2.77
3608 5971 3.303938 TGGTCCATTCTTTGCCTTCAAA 58.696 40.909 0.00 0.00 39.67 2.69
3611 5974 4.115401 GAATGGTCCATTCTTTGCCTTC 57.885 45.455 29.95 8.52 44.60 3.46
3667 6030 6.832520 AGGTGTTCATGCATGTGTAATTTA 57.167 33.333 25.43 1.24 0.00 1.40
4081 6508 1.198759 TTCCCACTGGTAGCCTCACC 61.199 60.000 0.00 0.00 39.20 4.02
4173 6600 2.124695 GCTCGGGCCTTTGGGTAG 60.125 66.667 0.84 0.00 34.45 3.18
4356 6810 8.890718 CCATATGATTCATATCAGCTAAACCAG 58.109 37.037 14.88 1.97 43.70 4.00
4516 6972 6.197282 CGAGGTACTAGCAATATAATCATGCG 59.803 42.308 0.00 0.00 42.02 4.73
4563 7023 4.261322 GCGTCCATGCATTCATCTTATTGT 60.261 41.667 0.00 0.00 34.15 2.71
4632 7095 8.833231 AATGTCTATCCCGTTTACTCAATATG 57.167 34.615 0.00 0.00 0.00 1.78
4648 7111 6.621613 TGAGTGTACTGTGTGAATGTCTATC 58.378 40.000 0.00 0.00 0.00 2.08
4727 7203 4.093408 GCAGCATTTCTATTGACAACGAGA 59.907 41.667 0.00 0.00 0.00 4.04
4747 7223 3.191371 GGTCATTTTTCCAGTGTAGGCAG 59.809 47.826 0.00 0.00 0.00 4.85
4757 7233 7.147391 TGTCCTATATAGCTGGTCATTTTTCCA 60.147 37.037 4.04 0.00 0.00 3.53
4794 7270 5.280215 CCACTAGGCCAAATCCCTATCTAAG 60.280 48.000 5.01 0.00 34.59 2.18
4821 7297 0.037605 GGAGAGTGGTTGTGGTACCG 60.038 60.000 7.57 0.00 41.28 4.02
4836 7312 3.711704 CTGGTTGGCTAGGAATTAGGAGA 59.288 47.826 0.00 0.00 0.00 3.71
4842 7318 0.704076 TGGCTGGTTGGCTAGGAATT 59.296 50.000 0.00 0.00 42.34 2.17
4847 7323 2.496942 CCATTGGCTGGTTGGCTAG 58.503 57.895 0.00 0.00 40.49 3.42
4858 7334 2.939460 AACGATAAGCAACCATTGGC 57.061 45.000 1.54 0.00 0.00 4.52
4911 7387 5.046950 GGGGAGTCCAGTCACAGATATTATC 60.047 48.000 12.30 0.00 35.00 1.75
4912 7388 4.841246 GGGGAGTCCAGTCACAGATATTAT 59.159 45.833 12.30 0.00 35.00 1.28
4913 7389 4.223953 GGGGAGTCCAGTCACAGATATTA 58.776 47.826 12.30 0.00 35.00 0.98
4914 7390 3.041946 GGGGAGTCCAGTCACAGATATT 58.958 50.000 12.30 0.00 35.00 1.28
4927 7403 0.613777 AACTGAATCACGGGGAGTCC 59.386 55.000 5.12 0.00 39.84 3.85
4936 7412 8.311120 CGTTTTAGAAACAACAAACTGAATCAC 58.689 33.333 4.65 0.00 0.00 3.06
4938 7414 8.311120 CACGTTTTAGAAACAACAAACTGAATC 58.689 33.333 4.65 0.00 0.00 2.52
4940 7416 7.361127 TCACGTTTTAGAAACAACAAACTGAA 58.639 30.769 4.65 0.00 0.00 3.02
4941 7417 6.900189 TCACGTTTTAGAAACAACAAACTGA 58.100 32.000 4.65 0.00 0.00 3.41
4942 7418 7.018826 TCTCACGTTTTAGAAACAACAAACTG 58.981 34.615 4.65 0.00 0.00 3.16
4943 7419 7.136289 TCTCACGTTTTAGAAACAACAAACT 57.864 32.000 4.65 0.00 0.00 2.66
4944 7420 7.964545 ATCTCACGTTTTAGAAACAACAAAC 57.035 32.000 4.65 0.00 0.00 2.93
4967 7443 8.893727 GGAGTTCTGCTTATGTTGTATTTGTAT 58.106 33.333 0.00 0.00 0.00 2.29
4973 7449 7.281100 GCTAAAGGAGTTCTGCTTATGTTGTAT 59.719 37.037 6.98 0.00 0.00 2.29
4974 7450 6.594159 GCTAAAGGAGTTCTGCTTATGTTGTA 59.406 38.462 6.98 0.00 0.00 2.41
4975 7451 5.412904 GCTAAAGGAGTTCTGCTTATGTTGT 59.587 40.000 6.98 0.00 0.00 3.32
4976 7452 5.163713 GGCTAAAGGAGTTCTGCTTATGTTG 60.164 44.000 6.98 0.00 0.00 3.33
4977 7453 4.944317 GGCTAAAGGAGTTCTGCTTATGTT 59.056 41.667 6.98 0.00 0.00 2.71
4978 7454 4.019321 TGGCTAAAGGAGTTCTGCTTATGT 60.019 41.667 6.98 0.00 0.00 2.29
4991 7467 2.902608 TCTCTGAACCTGGCTAAAGGA 58.097 47.619 7.51 0.00 40.02 3.36
4995 7471 5.241403 TGAAATTCTCTGAACCTGGCTAA 57.759 39.130 0.00 0.00 0.00 3.09
5030 7506 8.894768 TGTGTATTTTCCTTTTACCATTTTGG 57.105 30.769 0.00 0.00 45.02 3.28
5059 7535 9.667107 TTCTTGACAATATTCCGAGTAAGAAAT 57.333 29.630 0.00 0.00 31.15 2.17
5177 7658 9.630098 GACAATGATTGTACATCTGATGTTTTT 57.370 29.630 26.56 10.89 45.52 1.94
5178 7659 8.795513 TGACAATGATTGTACATCTGATGTTTT 58.204 29.630 26.56 10.57 45.52 2.43
5179 7660 8.339344 TGACAATGATTGTACATCTGATGTTT 57.661 30.769 26.56 11.46 45.52 2.83
5180 7661 7.926674 TGACAATGATTGTACATCTGATGTT 57.073 32.000 26.56 10.30 45.52 2.71
5181 7662 7.991460 AGATGACAATGATTGTACATCTGATGT 59.009 33.333 30.19 25.01 45.62 3.06
5182 7663 8.379457 AGATGACAATGATTGTACATCTGATG 57.621 34.615 30.19 15.83 45.62 3.07
5183 7664 8.975663 AAGATGACAATGATTGTACATCTGAT 57.024 30.769 30.76 22.20 46.05 2.90
5184 7665 8.042515 TGAAGATGACAATGATTGTACATCTGA 58.957 33.333 30.76 23.75 46.05 3.27
5185 7666 8.121086 GTGAAGATGACAATGATTGTACATCTG 58.879 37.037 30.76 4.99 46.05 2.90
5187 7668 7.907045 GTGTGAAGATGACAATGATTGTACATC 59.093 37.037 25.84 25.84 45.52 3.06
5188 7669 7.413328 CGTGTGAAGATGACAATGATTGTACAT 60.413 37.037 11.28 15.00 45.52 2.29
5189 7670 6.128580 CGTGTGAAGATGACAATGATTGTACA 60.129 38.462 11.28 11.13 45.52 2.90
5190 7671 6.243551 CGTGTGAAGATGACAATGATTGTAC 58.756 40.000 11.28 4.60 45.52 2.90
5191 7672 5.163864 GCGTGTGAAGATGACAATGATTGTA 60.164 40.000 11.28 0.70 45.52 2.41
5193 7674 4.093514 GCGTGTGAAGATGACAATGATTG 58.906 43.478 3.16 3.16 0.00 2.67
5194 7675 3.127548 GGCGTGTGAAGATGACAATGATT 59.872 43.478 0.00 0.00 0.00 2.57
5195 7676 2.679837 GGCGTGTGAAGATGACAATGAT 59.320 45.455 0.00 0.00 0.00 2.45
5196 7677 2.076100 GGCGTGTGAAGATGACAATGA 58.924 47.619 0.00 0.00 0.00 2.57
5197 7678 2.079158 AGGCGTGTGAAGATGACAATG 58.921 47.619 0.00 0.00 0.00 2.82
5198 7679 2.289631 TGAGGCGTGTGAAGATGACAAT 60.290 45.455 0.00 0.00 0.00 2.71
5199 7680 1.069978 TGAGGCGTGTGAAGATGACAA 59.930 47.619 0.00 0.00 0.00 3.18
5200 7681 0.678950 TGAGGCGTGTGAAGATGACA 59.321 50.000 0.00 0.00 0.00 3.58
5201 7682 1.662629 CATGAGGCGTGTGAAGATGAC 59.337 52.381 0.00 0.00 0.00 3.06
5202 7683 2.008543 GCATGAGGCGTGTGAAGATGA 61.009 52.381 0.00 0.00 0.00 2.92
5203 7684 0.376152 GCATGAGGCGTGTGAAGATG 59.624 55.000 0.00 0.00 0.00 2.90
5204 7685 0.745845 GGCATGAGGCGTGTGAAGAT 60.746 55.000 0.00 0.00 46.16 2.40
5205 7686 1.375908 GGCATGAGGCGTGTGAAGA 60.376 57.895 0.00 0.00 46.16 2.87
5206 7687 2.401766 GGGCATGAGGCGTGTGAAG 61.402 63.158 0.00 0.00 46.16 3.02
5207 7688 2.359850 GGGCATGAGGCGTGTGAA 60.360 61.111 0.00 0.00 46.16 3.18
5208 7689 3.635191 TGGGCATGAGGCGTGTGA 61.635 61.111 0.00 0.00 46.16 3.58
5209 7690 3.434319 GTGGGCATGAGGCGTGTG 61.434 66.667 0.00 0.00 46.16 3.82
5212 7693 4.760047 GACGTGGGCATGAGGCGT 62.760 66.667 0.00 0.31 46.16 5.68
5214 7695 4.101448 AGGACGTGGGCATGAGGC 62.101 66.667 0.00 0.00 43.74 4.70
5215 7696 2.124983 CAGGACGTGGGCATGAGG 60.125 66.667 0.00 0.00 0.00 3.86
5216 7697 2.124983 CCAGGACGTGGGCATGAG 60.125 66.667 6.27 0.00 43.63 2.90
5224 7705 2.125753 GAGCAGAGCCAGGACGTG 60.126 66.667 0.00 0.00 0.00 4.49
5225 7706 3.386237 GGAGCAGAGCCAGGACGT 61.386 66.667 0.00 0.00 0.00 4.34
5226 7707 3.073735 AGGAGCAGAGCCAGGACG 61.074 66.667 0.00 0.00 0.00 4.79
5227 7708 2.583520 CAGGAGCAGAGCCAGGAC 59.416 66.667 0.00 0.00 0.00 3.85
5228 7709 3.397439 GCAGGAGCAGAGCCAGGA 61.397 66.667 0.00 0.00 41.58 3.86
5259 7740 4.704833 TCGTGCAAGGCAGAGGGC 62.705 66.667 0.00 0.00 40.08 5.19
5260 7741 2.743928 GTCGTGCAAGGCAGAGGG 60.744 66.667 0.00 0.00 40.08 4.30
5261 7742 3.114616 CGTCGTGCAAGGCAGAGG 61.115 66.667 4.84 0.00 40.08 3.69
5262 7743 3.114616 CCGTCGTGCAAGGCAGAG 61.115 66.667 4.84 0.00 40.08 3.35
5263 7744 4.680237 CCCGTCGTGCAAGGCAGA 62.680 66.667 4.84 0.00 40.08 4.26
5264 7745 3.583276 TACCCGTCGTGCAAGGCAG 62.583 63.158 4.84 0.00 40.08 4.85
5265 7746 3.617735 TACCCGTCGTGCAAGGCA 61.618 61.111 4.84 0.00 35.60 4.75
5266 7747 3.116531 GTACCCGTCGTGCAAGGC 61.117 66.667 0.00 0.00 0.00 4.35
5267 7748 1.079405 ATGTACCCGTCGTGCAAGG 60.079 57.895 0.00 0.00 40.73 3.61
5268 7749 0.389296 TGATGTACCCGTCGTGCAAG 60.389 55.000 0.00 0.00 40.73 4.01
5269 7750 0.668096 GTGATGTACCCGTCGTGCAA 60.668 55.000 0.00 0.00 40.73 4.08
5270 7751 1.080366 GTGATGTACCCGTCGTGCA 60.080 57.895 0.00 0.00 41.66 4.57
5271 7752 2.156446 CGTGATGTACCCGTCGTGC 61.156 63.158 0.00 0.00 0.00 5.34
5272 7753 2.156446 GCGTGATGTACCCGTCGTG 61.156 63.158 0.00 0.00 0.00 4.35
5273 7754 2.180017 GCGTGATGTACCCGTCGT 59.820 61.111 0.00 0.00 0.00 4.34
5274 7755 2.581409 GGCGTGATGTACCCGTCG 60.581 66.667 0.00 0.00 0.00 5.12
5275 7756 0.386476 TATGGCGTGATGTACCCGTC 59.614 55.000 0.00 0.00 0.00 4.79
5276 7757 0.825410 TTATGGCGTGATGTACCCGT 59.175 50.000 0.00 0.00 0.00 5.28
5277 7758 1.214367 GTTATGGCGTGATGTACCCG 58.786 55.000 0.00 0.00 0.00 5.28
5278 7759 1.140252 AGGTTATGGCGTGATGTACCC 59.860 52.381 0.00 0.00 0.00 3.69
5279 7760 2.159014 TGAGGTTATGGCGTGATGTACC 60.159 50.000 0.00 0.00 0.00 3.34
5280 7761 3.173668 TGAGGTTATGGCGTGATGTAC 57.826 47.619 0.00 0.00 0.00 2.90
5281 7762 3.527533 GTTGAGGTTATGGCGTGATGTA 58.472 45.455 0.00 0.00 0.00 2.29
5282 7763 2.356135 GTTGAGGTTATGGCGTGATGT 58.644 47.619 0.00 0.00 0.00 3.06
5283 7764 1.327460 CGTTGAGGTTATGGCGTGATG 59.673 52.381 0.00 0.00 0.00 3.07
5284 7765 1.651987 CGTTGAGGTTATGGCGTGAT 58.348 50.000 0.00 0.00 0.00 3.06
5285 7766 0.390603 CCGTTGAGGTTATGGCGTGA 60.391 55.000 0.00 0.00 34.51 4.35
5286 7767 0.390603 TCCGTTGAGGTTATGGCGTG 60.391 55.000 0.00 0.00 41.99 5.34
5287 7768 0.390735 GTCCGTTGAGGTTATGGCGT 60.391 55.000 0.00 0.00 41.99 5.68
5288 7769 0.390603 TGTCCGTTGAGGTTATGGCG 60.391 55.000 0.00 0.00 41.99 5.69
5289 7770 1.369625 CTGTCCGTTGAGGTTATGGC 58.630 55.000 0.00 0.00 41.99 4.40
5290 7771 2.012051 GCCTGTCCGTTGAGGTTATGG 61.012 57.143 0.00 0.00 41.99 2.74
5291 7772 1.369625 GCCTGTCCGTTGAGGTTATG 58.630 55.000 0.00 0.00 41.99 1.90
5292 7773 0.252197 GGCCTGTCCGTTGAGGTTAT 59.748 55.000 0.00 0.00 41.99 1.89
5293 7774 1.122632 TGGCCTGTCCGTTGAGGTTA 61.123 55.000 3.32 0.00 41.99 2.85
5294 7775 2.430367 GGCCTGTCCGTTGAGGTT 59.570 61.111 0.00 0.00 41.99 3.50
5295 7776 2.847234 TGGCCTGTCCGTTGAGGT 60.847 61.111 3.32 0.00 41.99 3.85
5296 7777 1.541310 TAGTGGCCTGTCCGTTGAGG 61.541 60.000 3.32 0.00 42.97 3.86
5297 7778 0.320374 TTAGTGGCCTGTCCGTTGAG 59.680 55.000 3.32 0.00 37.80 3.02
5298 7779 0.320374 CTTAGTGGCCTGTCCGTTGA 59.680 55.000 3.32 0.00 37.80 3.18
5299 7780 0.673644 CCTTAGTGGCCTGTCCGTTG 60.674 60.000 3.32 0.00 37.80 4.10
5300 7781 1.677552 CCTTAGTGGCCTGTCCGTT 59.322 57.895 3.32 0.00 37.80 4.44
5301 7782 2.291043 CCCTTAGTGGCCTGTCCGT 61.291 63.158 3.32 0.00 37.80 4.69
5302 7783 2.584608 CCCTTAGTGGCCTGTCCG 59.415 66.667 3.32 0.00 37.80 4.79
5303 7784 2.272471 GCCCTTAGTGGCCTGTCC 59.728 66.667 3.32 0.00 46.11 4.02
5310 7791 2.422127 CGTTGGTAAATGCCCTTAGTGG 59.578 50.000 0.00 0.00 0.00 4.00
5311 7792 3.340034 TCGTTGGTAAATGCCCTTAGTG 58.660 45.455 0.00 0.00 0.00 2.74
5312 7793 3.706600 TCGTTGGTAAATGCCCTTAGT 57.293 42.857 0.00 0.00 0.00 2.24
5313 7794 3.377172 CCTTCGTTGGTAAATGCCCTTAG 59.623 47.826 0.00 0.00 0.00 2.18
5314 7795 3.349022 CCTTCGTTGGTAAATGCCCTTA 58.651 45.455 0.00 0.00 0.00 2.69
5315 7796 2.167662 CCTTCGTTGGTAAATGCCCTT 58.832 47.619 0.00 0.00 0.00 3.95
5316 7797 1.615919 CCCTTCGTTGGTAAATGCCCT 60.616 52.381 0.00 0.00 0.00 5.19
5317 7798 0.815095 CCCTTCGTTGGTAAATGCCC 59.185 55.000 0.00 0.00 0.00 5.36
5318 7799 0.815095 CCCCTTCGTTGGTAAATGCC 59.185 55.000 0.00 0.00 0.00 4.40
5319 7800 0.172578 GCCCCTTCGTTGGTAAATGC 59.827 55.000 0.00 0.00 0.00 3.56
5320 7801 1.834188 AGCCCCTTCGTTGGTAAATG 58.166 50.000 0.00 0.00 0.00 2.32
5321 7802 3.551846 CATAGCCCCTTCGTTGGTAAAT 58.448 45.455 0.00 0.00 0.00 1.40
5322 7803 2.942306 GCATAGCCCCTTCGTTGGTAAA 60.942 50.000 0.00 0.00 0.00 2.01
5323 7804 1.407712 GCATAGCCCCTTCGTTGGTAA 60.408 52.381 0.00 0.00 0.00 2.85
5324 7805 0.179468 GCATAGCCCCTTCGTTGGTA 59.821 55.000 0.00 0.00 0.00 3.25
5325 7806 1.077716 GCATAGCCCCTTCGTTGGT 60.078 57.895 0.00 0.00 0.00 3.67
5326 7807 0.394352 AAGCATAGCCCCTTCGTTGG 60.394 55.000 0.00 0.00 0.00 3.77
5327 7808 1.017387 GAAGCATAGCCCCTTCGTTG 58.983 55.000 0.00 0.00 0.00 4.10
5328 7809 0.107165 GGAAGCATAGCCCCTTCGTT 60.107 55.000 0.00 0.00 38.62 3.85
5329 7810 1.271840 TGGAAGCATAGCCCCTTCGT 61.272 55.000 0.00 0.00 38.62 3.85
5330 7811 0.815615 GTGGAAGCATAGCCCCTTCG 60.816 60.000 0.00 0.00 38.62 3.79
5331 7812 0.466372 GGTGGAAGCATAGCCCCTTC 60.466 60.000 0.00 0.00 37.36 3.46
5332 7813 1.214305 TGGTGGAAGCATAGCCCCTT 61.214 55.000 0.00 0.00 40.88 3.95
5333 7814 1.619363 TGGTGGAAGCATAGCCCCT 60.619 57.895 0.00 0.00 40.88 4.79
5334 7815 3.006677 TGGTGGAAGCATAGCCCC 58.993 61.111 0.00 0.00 40.88 5.80
5342 7823 0.968405 TCAAAAGCCATGGTGGAAGC 59.032 50.000 14.67 0.00 40.96 3.86
5343 7824 2.607771 CGTTCAAAAGCCATGGTGGAAG 60.608 50.000 14.67 1.36 40.96 3.46
5344 7825 1.339610 CGTTCAAAAGCCATGGTGGAA 59.660 47.619 14.67 7.50 40.96 3.53
5345 7826 0.958091 CGTTCAAAAGCCATGGTGGA 59.042 50.000 14.67 0.00 40.96 4.02
5346 7827 0.667184 GCGTTCAAAAGCCATGGTGG 60.667 55.000 14.67 0.00 41.55 4.61
5347 7828 2.813100 GCGTTCAAAAGCCATGGTG 58.187 52.632 14.67 3.41 0.00 4.17
5354 7835 1.082104 CCGTCTGGCGTTCAAAAGC 60.082 57.895 0.00 0.00 39.32 3.51
5355 7836 0.234884 GTCCGTCTGGCGTTCAAAAG 59.765 55.000 0.00 0.00 39.32 2.27
5356 7837 1.161563 GGTCCGTCTGGCGTTCAAAA 61.162 55.000 0.00 0.00 39.32 2.44
5357 7838 1.595929 GGTCCGTCTGGCGTTCAAA 60.596 57.895 0.00 0.00 39.32 2.69
5358 7839 2.029964 GGTCCGTCTGGCGTTCAA 59.970 61.111 0.00 0.00 39.32 2.69
5359 7840 3.228017 TGGTCCGTCTGGCGTTCA 61.228 61.111 0.00 0.00 39.32 3.18
5360 7841 2.737376 GTGGTCCGTCTGGCGTTC 60.737 66.667 0.00 0.00 39.32 3.95
5361 7842 3.542676 TGTGGTCCGTCTGGCGTT 61.543 61.111 0.00 0.00 39.32 4.84
5362 7843 4.295119 GTGTGGTCCGTCTGGCGT 62.295 66.667 0.00 0.00 39.32 5.68
5364 7845 3.936203 TGGTGTGGTCCGTCTGGC 61.936 66.667 0.00 0.00 34.14 4.85
5365 7846 2.030562 GTGGTGTGGTCCGTCTGG 59.969 66.667 0.00 0.00 0.00 3.86
5366 7847 2.030562 GGTGGTGTGGTCCGTCTG 59.969 66.667 0.00 0.00 0.00 3.51
5367 7848 1.755393 GAAGGTGGTGTGGTCCGTCT 61.755 60.000 0.00 0.00 0.00 4.18
5368 7849 1.301479 GAAGGTGGTGTGGTCCGTC 60.301 63.158 0.00 0.00 0.00 4.79
5369 7850 1.628238 TTGAAGGTGGTGTGGTCCGT 61.628 55.000 0.00 0.00 0.00 4.69
5370 7851 1.147376 TTGAAGGTGGTGTGGTCCG 59.853 57.895 0.00 0.00 0.00 4.79
5371 7852 0.106918 TGTTGAAGGTGGTGTGGTCC 60.107 55.000 0.00 0.00 0.00 4.46
5372 7853 1.676006 CTTGTTGAAGGTGGTGTGGTC 59.324 52.381 0.00 0.00 0.00 4.02
5373 7854 1.684869 CCTTGTTGAAGGTGGTGTGGT 60.685 52.381 0.00 0.00 43.63 4.16
5374 7855 1.032014 CCTTGTTGAAGGTGGTGTGG 58.968 55.000 0.00 0.00 43.63 4.17
5383 7864 1.081641 CGCTGCTGCCTTGTTGAAG 60.082 57.895 10.24 0.00 35.36 3.02
5384 7865 1.525765 TCGCTGCTGCCTTGTTGAA 60.526 52.632 10.24 0.00 35.36 2.69
5385 7866 2.110835 TCGCTGCTGCCTTGTTGA 59.889 55.556 10.24 0.00 35.36 3.18
5386 7867 2.253452 GTCGCTGCTGCCTTGTTG 59.747 61.111 10.24 0.00 35.36 3.33
5387 7868 3.349006 CGTCGCTGCTGCCTTGTT 61.349 61.111 10.24 0.00 35.36 2.83
5411 7892 3.134127 GGCACTTGGATCCGGCAC 61.134 66.667 7.39 0.00 0.00 5.01
5412 7893 2.497792 AATGGCACTTGGATCCGGCA 62.498 55.000 14.47 14.47 38.39 5.69
5413 7894 1.322538 AAATGGCACTTGGATCCGGC 61.323 55.000 7.39 8.06 0.00 6.13
5414 7895 0.457035 CAAATGGCACTTGGATCCGG 59.543 55.000 7.39 5.09 0.00 5.14
5415 7896 1.176527 ACAAATGGCACTTGGATCCG 58.823 50.000 13.73 0.00 0.00 4.18
5416 7897 2.097466 CGTACAAATGGCACTTGGATCC 59.903 50.000 13.73 4.20 0.00 3.36
5417 7898 2.097466 CCGTACAAATGGCACTTGGATC 59.903 50.000 13.73 2.29 0.00 3.36
5418 7899 2.091541 CCGTACAAATGGCACTTGGAT 58.908 47.619 13.73 0.00 0.00 3.41
5419 7900 1.072489 TCCGTACAAATGGCACTTGGA 59.928 47.619 13.73 0.49 0.00 3.53
5420 7901 1.199097 GTCCGTACAAATGGCACTTGG 59.801 52.381 13.73 0.00 0.00 3.61
5421 7902 1.136085 CGTCCGTACAAATGGCACTTG 60.136 52.381 7.20 7.20 0.00 3.16
5422 7903 1.153353 CGTCCGTACAAATGGCACTT 58.847 50.000 0.00 0.00 0.00 3.16
5423 7904 1.296056 GCGTCCGTACAAATGGCACT 61.296 55.000 0.00 0.00 0.00 4.40
5424 7905 1.133869 GCGTCCGTACAAATGGCAC 59.866 57.895 0.00 0.00 0.00 5.01
5425 7906 0.246910 TAGCGTCCGTACAAATGGCA 59.753 50.000 0.00 0.00 0.00 4.92
5426 7907 1.578583 ATAGCGTCCGTACAAATGGC 58.421 50.000 0.00 0.00 0.00 4.40
5427 7908 4.233123 TCTATAGCGTCCGTACAAATGG 57.767 45.455 0.00 0.00 0.00 3.16
5428 7909 6.128902 GGAAATCTATAGCGTCCGTACAAATG 60.129 42.308 0.00 0.00 0.00 2.32
5429 7910 5.924825 GGAAATCTATAGCGTCCGTACAAAT 59.075 40.000 0.00 0.00 0.00 2.32
5430 7911 5.284079 GGAAATCTATAGCGTCCGTACAAA 58.716 41.667 0.00 0.00 0.00 2.83
5431 7912 4.555313 CGGAAATCTATAGCGTCCGTACAA 60.555 45.833 21.25 0.00 44.85 2.41
5432 7913 3.058708 CGGAAATCTATAGCGTCCGTACA 60.059 47.826 21.25 0.00 44.85 2.90
5433 7914 3.486584 CGGAAATCTATAGCGTCCGTAC 58.513 50.000 21.25 0.00 44.85 3.67
5434 7915 3.818961 CGGAAATCTATAGCGTCCGTA 57.181 47.619 21.25 0.00 44.85 4.02
5435 7916 2.701073 CGGAAATCTATAGCGTCCGT 57.299 50.000 21.25 0.00 44.85 4.69
5437 7918 1.272769 AGGCGGAAATCTATAGCGTCC 59.727 52.381 0.00 0.87 0.00 4.79
5438 7919 2.030185 TCAGGCGGAAATCTATAGCGTC 60.030 50.000 0.00 0.00 0.00 5.19
5439 7920 1.961394 TCAGGCGGAAATCTATAGCGT 59.039 47.619 0.00 0.00 0.00 5.07
5440 7921 2.724977 TCAGGCGGAAATCTATAGCG 57.275 50.000 0.00 0.00 0.00 4.26
5441 7922 3.119459 TCGATCAGGCGGAAATCTATAGC 60.119 47.826 0.00 0.00 0.00 2.97
5442 7923 4.156922 ACTCGATCAGGCGGAAATCTATAG 59.843 45.833 0.00 0.00 0.00 1.31
5443 7924 4.079970 ACTCGATCAGGCGGAAATCTATA 58.920 43.478 0.00 0.00 0.00 1.31
5444 7925 2.894126 ACTCGATCAGGCGGAAATCTAT 59.106 45.455 0.00 0.00 0.00 1.98
5445 7926 2.293677 GACTCGATCAGGCGGAAATCTA 59.706 50.000 0.00 0.00 0.00 1.98
5446 7927 1.067821 GACTCGATCAGGCGGAAATCT 59.932 52.381 0.00 0.00 0.00 2.40
5447 7928 1.067821 AGACTCGATCAGGCGGAAATC 59.932 52.381 0.00 0.00 33.76 2.17
5448 7929 1.115467 AGACTCGATCAGGCGGAAAT 58.885 50.000 0.00 0.00 33.76 2.17
5449 7930 0.173481 CAGACTCGATCAGGCGGAAA 59.827 55.000 0.00 0.00 33.76 3.13
5450 7931 0.679960 TCAGACTCGATCAGGCGGAA 60.680 55.000 0.00 0.00 30.05 4.30
5451 7932 1.077716 TCAGACTCGATCAGGCGGA 60.078 57.895 0.00 0.00 33.76 5.54
5452 7933 1.064946 GTCAGACTCGATCAGGCGG 59.935 63.158 0.00 0.00 33.76 6.13
5453 7934 1.064946 GGTCAGACTCGATCAGGCG 59.935 63.158 0.00 0.00 33.76 5.52
5454 7935 1.064946 CGGTCAGACTCGATCAGGC 59.935 63.158 0.00 0.00 0.00 4.85
5455 7936 1.064946 GCGGTCAGACTCGATCAGG 59.935 63.158 13.67 0.00 0.00 3.86
5456 7937 0.248417 CAGCGGTCAGACTCGATCAG 60.248 60.000 13.67 0.00 0.00 2.90
5457 7938 0.960861 ACAGCGGTCAGACTCGATCA 60.961 55.000 13.67 0.00 0.00 2.92
5458 7939 1.015109 TACAGCGGTCAGACTCGATC 58.985 55.000 13.67 0.00 0.00 3.69
5459 7940 1.335182 CATACAGCGGTCAGACTCGAT 59.665 52.381 13.67 6.10 0.00 3.59
5460 7941 0.733150 CATACAGCGGTCAGACTCGA 59.267 55.000 13.67 0.00 0.00 4.04
5461 7942 0.248661 CCATACAGCGGTCAGACTCG 60.249 60.000 0.00 3.89 0.00 4.18
5462 7943 0.528684 GCCATACAGCGGTCAGACTC 60.529 60.000 0.00 0.00 0.00 3.36
5463 7944 1.257750 TGCCATACAGCGGTCAGACT 61.258 55.000 0.00 0.00 34.65 3.24
5464 7945 0.179073 ATGCCATACAGCGGTCAGAC 60.179 55.000 0.00 0.00 34.65 3.51
5465 7946 0.541392 AATGCCATACAGCGGTCAGA 59.459 50.000 0.00 0.00 34.65 3.27
5466 7947 0.940126 GAATGCCATACAGCGGTCAG 59.060 55.000 0.00 0.00 34.65 3.51
5467 7948 0.541392 AGAATGCCATACAGCGGTCA 59.459 50.000 0.00 0.00 34.65 4.02
5468 7949 1.221414 GAGAATGCCATACAGCGGTC 58.779 55.000 0.00 0.00 34.65 4.79
5469 7950 0.179045 GGAGAATGCCATACAGCGGT 60.179 55.000 0.00 0.00 34.65 5.68
5470 7951 0.107456 AGGAGAATGCCATACAGCGG 59.893 55.000 0.00 0.00 34.65 5.52
5471 7952 1.959042 AAGGAGAATGCCATACAGCG 58.041 50.000 0.00 0.00 34.65 5.18
5472 7953 2.802816 CGTAAGGAGAATGCCATACAGC 59.197 50.000 0.00 0.00 32.97 4.40
5488 7969 3.659089 CTCCACCCGCACCCGTAAG 62.659 68.421 0.00 0.00 0.00 2.34
5489 7970 3.697747 CTCCACCCGCACCCGTAA 61.698 66.667 0.00 0.00 0.00 3.18
5493 7974 3.338275 TTATGCTCCACCCGCACCC 62.338 63.158 0.00 0.00 40.65 4.61
5494 7975 2.112815 GTTATGCTCCACCCGCACC 61.113 63.158 0.00 0.00 40.65 5.01
5495 7976 1.078426 AGTTATGCTCCACCCGCAC 60.078 57.895 0.00 0.00 40.65 5.34
5496 7977 1.220749 GAGTTATGCTCCACCCGCA 59.779 57.895 0.00 0.00 42.25 5.69
5497 7978 1.883084 CGAGTTATGCTCCACCCGC 60.883 63.158 0.00 0.00 41.10 6.13
5498 7979 0.742505 TACGAGTTATGCTCCACCCG 59.257 55.000 0.00 0.00 41.10 5.28
5499 7980 1.535437 CGTACGAGTTATGCTCCACCC 60.535 57.143 10.44 0.00 41.10 4.61
5500 7981 1.402968 TCGTACGAGTTATGCTCCACC 59.597 52.381 15.28 0.00 41.10 4.61
5501 7982 2.448219 GTCGTACGAGTTATGCTCCAC 58.552 52.381 20.18 0.00 41.10 4.02
5502 7983 1.402968 GGTCGTACGAGTTATGCTCCA 59.597 52.381 20.18 0.00 41.10 3.86
5503 7984 2.116787 GGTCGTACGAGTTATGCTCC 57.883 55.000 20.18 9.91 41.10 4.70


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.