Multiple sequence alignment - TraesCS2A01G018400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G018400 chr2A 100.000 2809 0 0 1 2809 8706395 8709203 0.000000e+00 5188.0
1 TraesCS2A01G018400 chr2A 100.000 135 0 0 3348 3482 8709742 8709876 2.080000e-62 250.0
2 TraesCS2A01G018400 chr2B 90.713 2455 170 26 379 2809 12421687 12424107 0.000000e+00 3217.0
3 TraesCS2A01G018400 chr2B 90.490 2471 175 24 383 2809 11518948 11516494 0.000000e+00 3206.0
4 TraesCS2A01G018400 chr2B 85.379 1703 236 11 816 2514 768807185 768805492 0.000000e+00 1753.0
5 TraesCS2A01G018400 chr2B 84.322 1703 253 12 816 2514 768929605 768927913 0.000000e+00 1653.0
6 TraesCS2A01G018400 chr2B 83.426 1792 269 18 735 2519 138993554 138991784 0.000000e+00 1639.0
7 TraesCS2A01G018400 chr2B 82.266 1483 236 17 1040 2512 13058740 13057275 0.000000e+00 1256.0
8 TraesCS2A01G018400 chr2B 78.586 481 89 13 2033 2509 11420029 11420499 4.370000e-79 305.0
9 TraesCS2A01G018400 chr2D 91.337 2251 155 17 596 2809 9604325 9606572 0.000000e+00 3040.0
10 TraesCS2A01G018400 chr2D 85.289 1781 244 12 735 2509 19586748 19588516 0.000000e+00 1821.0
11 TraesCS2A01G018400 chr2D 82.719 1898 288 32 736 2617 8695396 8697269 0.000000e+00 1652.0
12 TraesCS2A01G018400 chr2D 83.151 1828 275 21 735 2555 85929845 85928044 0.000000e+00 1639.0
13 TraesCS2A01G018400 chr2D 93.985 133 8 0 3348 3480 21620546 21620414 5.890000e-48 202.0
14 TraesCS2A01G018400 chr2D 93.701 127 8 0 3354 3480 87448458 87448332 1.280000e-44 191.0
15 TraesCS2A01G018400 chr1A 97.037 135 4 0 3348 3482 12571312 12571446 9.720000e-56 228.0
16 TraesCS2A01G018400 chr7D 92.913 127 9 0 3354 3480 382651556 382651430 5.930000e-43 185.0
17 TraesCS2A01G018400 chr6D 92.913 127 8 1 3354 3480 472795645 472795520 2.130000e-42 183.0
18 TraesCS2A01G018400 chr5D 92.453 106 8 0 3375 3480 508569404 508569299 6.020000e-33 152.0
19 TraesCS2A01G018400 chr7B 86.667 135 15 3 3348 3480 59319310 59319443 2.800000e-31 147.0
20 TraesCS2A01G018400 chr4D 86.667 135 15 3 3348 3480 480967820 480967953 2.800000e-31 147.0
21 TraesCS2A01G018400 chr4D 97.143 35 1 0 124 158 20114871 20114905 3.750000e-05 60.2
22 TraesCS2A01G018400 chr6A 87.500 120 14 1 3359 3477 446519241 446519360 1.690000e-28 137.0
23 TraesCS2A01G018400 chr6B 93.023 43 3 0 114 156 16341354 16341396 2.900000e-06 63.9
24 TraesCS2A01G018400 chr6B 97.143 35 1 0 122 156 52978788 52978754 3.750000e-05 60.2
25 TraesCS2A01G018400 chr1D 97.222 36 1 0 131 166 351914321 351914356 1.040000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G018400 chr2A 8706395 8709876 3481 False 2719 5188 100.000 1 3482 2 chr2A.!!$F1 3481
1 TraesCS2A01G018400 chr2B 12421687 12424107 2420 False 3217 3217 90.713 379 2809 1 chr2B.!!$F2 2430
2 TraesCS2A01G018400 chr2B 11516494 11518948 2454 True 3206 3206 90.490 383 2809 1 chr2B.!!$R1 2426
3 TraesCS2A01G018400 chr2B 768805492 768807185 1693 True 1753 1753 85.379 816 2514 1 chr2B.!!$R4 1698
4 TraesCS2A01G018400 chr2B 768927913 768929605 1692 True 1653 1653 84.322 816 2514 1 chr2B.!!$R5 1698
5 TraesCS2A01G018400 chr2B 138991784 138993554 1770 True 1639 1639 83.426 735 2519 1 chr2B.!!$R3 1784
6 TraesCS2A01G018400 chr2B 13057275 13058740 1465 True 1256 1256 82.266 1040 2512 1 chr2B.!!$R2 1472
7 TraesCS2A01G018400 chr2D 9604325 9606572 2247 False 3040 3040 91.337 596 2809 1 chr2D.!!$F2 2213
8 TraesCS2A01G018400 chr2D 19586748 19588516 1768 False 1821 1821 85.289 735 2509 1 chr2D.!!$F3 1774
9 TraesCS2A01G018400 chr2D 8695396 8697269 1873 False 1652 1652 82.719 736 2617 1 chr2D.!!$F1 1881
10 TraesCS2A01G018400 chr2D 85928044 85929845 1801 True 1639 1639 83.151 735 2555 1 chr2D.!!$R2 1820

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
293 294 0.109597 GCAGACGGCAAACATCAAGG 60.110 55.0 0.00 0.0 43.97 3.61 F
435 436 0.171455 CAGGAGCTCGCTCTTAACGT 59.829 55.0 17.48 0.0 42.38 3.99 F
1136 1179 0.035630 AGATTGCAGCACCTCCTGAC 60.036 55.0 0.00 0.0 34.77 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1136 1179 0.179187 AACGACGATGCTGACTCTCG 60.179 55.0 0.0 0.0 38.34 4.04 R
2114 2161 0.381801 GTCCAATATGCAACGCCAGG 59.618 55.0 0.0 0.0 0.00 4.45 R
2753 2844 0.111134 CGACAGCACAACACATCACG 60.111 55.0 0.0 0.0 0.00 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.934023 ACCTTTCAATAGTATTTTGACTCCAA 57.066 30.769 0.00 0.00 33.03 3.53
26 27 9.533831 ACCTTTCAATAGTATTTTGACTCCAAT 57.466 29.630 0.00 0.00 33.03 3.16
27 28 9.793252 CCTTTCAATAGTATTTTGACTCCAATG 57.207 33.333 0.00 0.00 33.03 2.82
31 32 9.342308 TCAATAGTATTTTGACTCCAATGATCC 57.658 33.333 0.00 0.00 31.46 3.36
32 33 9.123902 CAATAGTATTTTGACTCCAATGATCCA 57.876 33.333 0.00 0.00 31.46 3.41
33 34 9.699410 AATAGTATTTTGACTCCAATGATCCAA 57.301 29.630 0.00 0.00 31.46 3.53
34 35 9.872684 ATAGTATTTTGACTCCAATGATCCAAT 57.127 29.630 0.00 0.00 31.46 3.16
35 36 8.230472 AGTATTTTGACTCCAATGATCCAATC 57.770 34.615 0.00 0.00 31.46 2.67
36 37 7.835682 AGTATTTTGACTCCAATGATCCAATCA 59.164 33.333 0.00 0.00 44.55 2.57
37 38 6.519679 TTTTGACTCCAATGATCCAATCAG 57.480 37.500 0.00 0.00 43.53 2.90
38 39 5.440207 TTGACTCCAATGATCCAATCAGA 57.560 39.130 0.00 0.00 43.53 3.27
39 40 4.774124 TGACTCCAATGATCCAATCAGAC 58.226 43.478 0.00 0.00 43.53 3.51
40 41 4.225717 TGACTCCAATGATCCAATCAGACA 59.774 41.667 0.00 0.00 43.53 3.41
41 42 5.183530 ACTCCAATGATCCAATCAGACAA 57.816 39.130 0.00 0.00 43.53 3.18
42 43 5.191426 ACTCCAATGATCCAATCAGACAAG 58.809 41.667 0.00 0.00 43.53 3.16
43 44 4.529897 TCCAATGATCCAATCAGACAAGG 58.470 43.478 0.00 0.00 43.53 3.61
44 45 3.067742 CCAATGATCCAATCAGACAAGGC 59.932 47.826 0.00 0.00 43.53 4.35
45 46 3.657398 ATGATCCAATCAGACAAGGCA 57.343 42.857 0.00 0.00 43.53 4.75
46 47 2.995283 TGATCCAATCAGACAAGGCAG 58.005 47.619 0.00 0.00 33.59 4.85
47 48 2.573009 TGATCCAATCAGACAAGGCAGA 59.427 45.455 0.00 0.00 33.59 4.26
48 49 2.775911 TCCAATCAGACAAGGCAGAG 57.224 50.000 0.00 0.00 0.00 3.35
49 50 2.259917 TCCAATCAGACAAGGCAGAGA 58.740 47.619 0.00 0.00 0.00 3.10
50 51 2.235650 TCCAATCAGACAAGGCAGAGAG 59.764 50.000 0.00 0.00 0.00 3.20
51 52 2.235650 CCAATCAGACAAGGCAGAGAGA 59.764 50.000 0.00 0.00 0.00 3.10
52 53 3.523547 CAATCAGACAAGGCAGAGAGAG 58.476 50.000 0.00 0.00 0.00 3.20
53 54 2.593925 TCAGACAAGGCAGAGAGAGA 57.406 50.000 0.00 0.00 0.00 3.10
54 55 2.881734 TCAGACAAGGCAGAGAGAGAA 58.118 47.619 0.00 0.00 0.00 2.87
55 56 2.560542 TCAGACAAGGCAGAGAGAGAAC 59.439 50.000 0.00 0.00 0.00 3.01
56 57 1.543802 AGACAAGGCAGAGAGAGAACG 59.456 52.381 0.00 0.00 0.00 3.95
57 58 1.271102 GACAAGGCAGAGAGAGAACGT 59.729 52.381 0.00 0.00 0.00 3.99
58 59 1.000283 ACAAGGCAGAGAGAGAACGTG 60.000 52.381 0.00 0.00 0.00 4.49
59 60 0.605589 AAGGCAGAGAGAGAACGTGG 59.394 55.000 0.00 0.00 0.00 4.94
60 61 0.251386 AGGCAGAGAGAGAACGTGGA 60.251 55.000 0.00 0.00 0.00 4.02
61 62 0.603569 GGCAGAGAGAGAACGTGGAA 59.396 55.000 0.00 0.00 0.00 3.53
62 63 1.205893 GGCAGAGAGAGAACGTGGAAT 59.794 52.381 0.00 0.00 0.00 3.01
63 64 2.354203 GGCAGAGAGAGAACGTGGAATT 60.354 50.000 0.00 0.00 0.00 2.17
64 65 3.119101 GGCAGAGAGAGAACGTGGAATTA 60.119 47.826 0.00 0.00 0.00 1.40
65 66 4.442192 GGCAGAGAGAGAACGTGGAATTAT 60.442 45.833 0.00 0.00 0.00 1.28
66 67 4.742659 GCAGAGAGAGAACGTGGAATTATC 59.257 45.833 0.00 0.00 0.00 1.75
67 68 5.451242 GCAGAGAGAGAACGTGGAATTATCT 60.451 44.000 0.00 0.00 30.42 1.98
68 69 6.238786 GCAGAGAGAGAACGTGGAATTATCTA 60.239 42.308 0.00 0.00 27.94 1.98
69 70 7.682261 GCAGAGAGAGAACGTGGAATTATCTAA 60.682 40.741 0.00 0.00 27.94 2.10
70 71 8.191446 CAGAGAGAGAACGTGGAATTATCTAAA 58.809 37.037 0.00 0.00 27.94 1.85
71 72 8.750298 AGAGAGAGAACGTGGAATTATCTAAAA 58.250 33.333 0.00 0.00 27.94 1.52
72 73 8.705048 AGAGAGAACGTGGAATTATCTAAAAC 57.295 34.615 0.00 0.00 27.94 2.43
73 74 7.764901 AGAGAGAACGTGGAATTATCTAAAACC 59.235 37.037 0.00 0.00 27.94 3.27
74 75 7.621796 AGAGAACGTGGAATTATCTAAAACCT 58.378 34.615 0.00 0.00 0.00 3.50
75 76 8.101419 AGAGAACGTGGAATTATCTAAAACCTT 58.899 33.333 0.00 0.00 0.00 3.50
76 77 8.631480 AGAACGTGGAATTATCTAAAACCTTT 57.369 30.769 0.00 0.00 0.00 3.11
77 78 8.512138 AGAACGTGGAATTATCTAAAACCTTTG 58.488 33.333 0.00 0.00 0.00 2.77
78 79 6.617879 ACGTGGAATTATCTAAAACCTTTGC 58.382 36.000 0.00 0.00 0.00 3.68
79 80 6.433093 ACGTGGAATTATCTAAAACCTTTGCT 59.567 34.615 0.00 0.00 0.00 3.91
80 81 6.967199 CGTGGAATTATCTAAAACCTTTGCTC 59.033 38.462 0.00 0.00 0.00 4.26
81 82 6.967199 GTGGAATTATCTAAAACCTTTGCTCG 59.033 38.462 0.00 0.00 0.00 5.03
82 83 6.657541 TGGAATTATCTAAAACCTTTGCTCGT 59.342 34.615 0.00 0.00 0.00 4.18
83 84 7.175990 TGGAATTATCTAAAACCTTTGCTCGTT 59.824 33.333 0.00 0.00 0.00 3.85
84 85 7.696872 GGAATTATCTAAAACCTTTGCTCGTTC 59.303 37.037 0.00 0.00 0.00 3.95
85 86 7.681939 ATTATCTAAAACCTTTGCTCGTTCA 57.318 32.000 0.00 0.00 0.00 3.18
86 87 7.499321 TTATCTAAAACCTTTGCTCGTTCAA 57.501 32.000 0.00 0.00 0.00 2.69
87 88 5.418310 TCTAAAACCTTTGCTCGTTCAAG 57.582 39.130 0.00 0.00 0.00 3.02
88 89 4.879545 TCTAAAACCTTTGCTCGTTCAAGT 59.120 37.500 0.00 0.00 0.00 3.16
89 90 3.420839 AAACCTTTGCTCGTTCAAGTG 57.579 42.857 0.00 0.00 0.00 3.16
90 91 2.325583 ACCTTTGCTCGTTCAAGTGA 57.674 45.000 0.00 0.00 0.00 3.41
91 92 2.639065 ACCTTTGCTCGTTCAAGTGAA 58.361 42.857 0.00 0.00 0.00 3.18
92 93 3.214328 ACCTTTGCTCGTTCAAGTGAAT 58.786 40.909 0.00 0.00 36.33 2.57
93 94 4.385825 ACCTTTGCTCGTTCAAGTGAATA 58.614 39.130 0.00 0.00 36.33 1.75
94 95 4.452455 ACCTTTGCTCGTTCAAGTGAATAG 59.548 41.667 0.00 0.33 36.33 1.73
95 96 4.398247 CTTTGCTCGTTCAAGTGAATAGC 58.602 43.478 17.73 17.73 41.88 2.97
96 97 3.319137 TGCTCGTTCAAGTGAATAGCT 57.681 42.857 21.84 0.00 41.96 3.32
97 98 4.450082 TGCTCGTTCAAGTGAATAGCTA 57.550 40.909 21.84 0.00 41.96 3.32
98 99 4.424626 TGCTCGTTCAAGTGAATAGCTAG 58.575 43.478 21.84 8.62 41.96 3.42
99 100 4.082190 TGCTCGTTCAAGTGAATAGCTAGT 60.082 41.667 21.84 0.00 41.96 2.57
100 101 4.266502 GCTCGTTCAAGTGAATAGCTAGTG 59.733 45.833 17.48 0.00 40.11 2.74
101 102 5.638596 TCGTTCAAGTGAATAGCTAGTGA 57.361 39.130 0.00 0.00 36.33 3.41
102 103 6.020971 TCGTTCAAGTGAATAGCTAGTGAA 57.979 37.500 0.00 0.00 36.33 3.18
103 104 6.631016 TCGTTCAAGTGAATAGCTAGTGAAT 58.369 36.000 0.00 0.00 36.33 2.57
104 105 7.768240 TCGTTCAAGTGAATAGCTAGTGAATA 58.232 34.615 0.00 0.00 36.33 1.75
105 106 7.915923 TCGTTCAAGTGAATAGCTAGTGAATAG 59.084 37.037 0.00 1.73 36.33 1.73
106 107 7.702772 CGTTCAAGTGAATAGCTAGTGAATAGT 59.297 37.037 0.00 0.00 36.33 2.12
107 108 8.812329 GTTCAAGTGAATAGCTAGTGAATAGTG 58.188 37.037 0.00 0.00 36.33 2.74
108 109 6.980978 TCAAGTGAATAGCTAGTGAATAGTGC 59.019 38.462 0.00 0.00 33.65 4.40
109 110 6.723298 AGTGAATAGCTAGTGAATAGTGCT 57.277 37.500 0.00 0.00 37.72 4.40
110 111 7.825331 AGTGAATAGCTAGTGAATAGTGCTA 57.175 36.000 0.00 0.00 39.97 3.49
111 112 8.239038 AGTGAATAGCTAGTGAATAGTGCTAA 57.761 34.615 0.00 0.00 39.27 3.09
112 113 8.696374 AGTGAATAGCTAGTGAATAGTGCTAAA 58.304 33.333 0.00 0.00 39.27 1.85
113 114 8.756864 GTGAATAGCTAGTGAATAGTGCTAAAC 58.243 37.037 0.00 0.00 39.27 2.01
114 115 8.696374 TGAATAGCTAGTGAATAGTGCTAAACT 58.304 33.333 0.00 0.00 43.40 2.66
115 116 9.187455 GAATAGCTAGTGAATAGTGCTAAACTC 57.813 37.037 0.00 0.00 40.56 3.01
116 117 6.783708 AGCTAGTGAATAGTGCTAAACTCT 57.216 37.500 0.00 0.00 40.56 3.24
117 118 6.568869 AGCTAGTGAATAGTGCTAAACTCTG 58.431 40.000 0.00 0.00 40.56 3.35
118 119 6.153680 AGCTAGTGAATAGTGCTAAACTCTGT 59.846 38.462 0.00 0.00 40.56 3.41
119 120 6.814146 GCTAGTGAATAGTGCTAAACTCTGTT 59.186 38.462 0.00 0.00 40.56 3.16
120 121 7.332182 GCTAGTGAATAGTGCTAAACTCTGTTT 59.668 37.037 1.33 1.33 40.56 2.83
121 122 7.659652 AGTGAATAGTGCTAAACTCTGTTTC 57.340 36.000 0.00 0.00 40.56 2.78
122 123 7.445945 AGTGAATAGTGCTAAACTCTGTTTCT 58.554 34.615 0.00 0.00 40.56 2.52
123 124 8.585881 AGTGAATAGTGCTAAACTCTGTTTCTA 58.414 33.333 0.00 0.00 40.56 2.10
124 125 9.204570 GTGAATAGTGCTAAACTCTGTTTCTAA 57.795 33.333 0.00 0.00 40.56 2.10
125 126 9.772973 TGAATAGTGCTAAACTCTGTTTCTAAA 57.227 29.630 0.00 0.00 40.56 1.85
130 131 9.944376 AGTGCTAAACTCTGTTTCTAAATATGA 57.056 29.630 0.00 0.00 31.64 2.15
136 137 9.490379 AAACTCTGTTTCTAAATATGAGACGTT 57.510 29.630 0.00 0.00 0.00 3.99
137 138 9.490379 AACTCTGTTTCTAAATATGAGACGTTT 57.510 29.630 0.00 0.00 0.00 3.60
138 139 9.490379 ACTCTGTTTCTAAATATGAGACGTTTT 57.510 29.630 0.00 0.00 0.00 2.43
141 142 8.722342 TGTTTCTAAATATGAGACGTTTTTGC 57.278 30.769 0.00 0.00 0.00 3.68
142 143 8.346300 TGTTTCTAAATATGAGACGTTTTTGCA 58.654 29.630 0.00 0.00 0.00 4.08
143 144 8.840867 GTTTCTAAATATGAGACGTTTTTGCAG 58.159 33.333 0.00 0.00 0.00 4.41
144 145 7.667043 TCTAAATATGAGACGTTTTTGCAGT 57.333 32.000 0.00 0.00 0.00 4.40
145 146 8.094798 TCTAAATATGAGACGTTTTTGCAGTT 57.905 30.769 0.00 0.00 0.00 3.16
146 147 8.227791 TCTAAATATGAGACGTTTTTGCAGTTC 58.772 33.333 0.00 0.00 0.00 3.01
147 148 5.940192 ATATGAGACGTTTTTGCAGTTCA 57.060 34.783 0.00 0.00 0.00 3.18
148 149 4.630894 ATGAGACGTTTTTGCAGTTCAA 57.369 36.364 0.00 0.00 0.00 2.69
149 150 4.630894 TGAGACGTTTTTGCAGTTCAAT 57.369 36.364 0.00 0.00 34.12 2.57
150 151 4.992688 TGAGACGTTTTTGCAGTTCAATT 58.007 34.783 0.00 0.00 34.12 2.32
151 152 5.406649 TGAGACGTTTTTGCAGTTCAATTT 58.593 33.333 0.00 0.00 34.12 1.82
152 153 5.288232 TGAGACGTTTTTGCAGTTCAATTTG 59.712 36.000 0.00 0.00 34.12 2.32
153 154 5.406649 AGACGTTTTTGCAGTTCAATTTGA 58.593 33.333 0.00 0.00 34.12 2.69
154 155 5.866633 AGACGTTTTTGCAGTTCAATTTGAA 59.133 32.000 7.74 7.74 34.12 2.69
167 168 5.825593 TCAATTTGAACAGAGGGAGTACT 57.174 39.130 0.00 0.00 0.00 2.73
168 169 6.928348 TCAATTTGAACAGAGGGAGTACTA 57.072 37.500 0.00 0.00 0.00 1.82
169 170 7.496346 TCAATTTGAACAGAGGGAGTACTAT 57.504 36.000 0.00 0.00 0.00 2.12
170 171 8.603898 TCAATTTGAACAGAGGGAGTACTATA 57.396 34.615 0.00 0.00 0.00 1.31
171 172 8.475639 TCAATTTGAACAGAGGGAGTACTATAC 58.524 37.037 0.00 0.00 0.00 1.47
172 173 8.478877 CAATTTGAACAGAGGGAGTACTATACT 58.521 37.037 0.00 0.00 42.86 2.12
173 174 8.611051 ATTTGAACAGAGGGAGTACTATACTT 57.389 34.615 0.00 0.00 39.59 2.24
174 175 7.406031 TTGAACAGAGGGAGTACTATACTTG 57.594 40.000 0.00 0.00 39.59 3.16
175 176 6.728411 TGAACAGAGGGAGTACTATACTTGA 58.272 40.000 0.00 0.00 39.59 3.02
176 177 6.602406 TGAACAGAGGGAGTACTATACTTGAC 59.398 42.308 0.00 0.00 39.59 3.18
177 178 6.075949 ACAGAGGGAGTACTATACTTGACA 57.924 41.667 0.00 0.00 39.59 3.58
178 179 6.491383 ACAGAGGGAGTACTATACTTGACAA 58.509 40.000 0.00 0.00 39.59 3.18
179 180 6.377712 ACAGAGGGAGTACTATACTTGACAAC 59.622 42.308 0.00 0.00 39.59 3.32
180 181 6.603997 CAGAGGGAGTACTATACTTGACAACT 59.396 42.308 0.00 0.00 39.59 3.16
181 182 6.829811 AGAGGGAGTACTATACTTGACAACTC 59.170 42.308 0.00 0.00 39.59 3.01
182 183 5.589452 AGGGAGTACTATACTTGACAACTCG 59.411 44.000 0.00 0.00 39.59 4.18
183 184 5.587844 GGGAGTACTATACTTGACAACTCGA 59.412 44.000 0.00 0.00 39.59 4.04
184 185 6.094603 GGGAGTACTATACTTGACAACTCGAA 59.905 42.308 0.00 0.00 39.59 3.71
185 186 7.188157 GGAGTACTATACTTGACAACTCGAAG 58.812 42.308 0.00 0.00 39.59 3.79
186 187 7.148272 GGAGTACTATACTTGACAACTCGAAGT 60.148 40.741 0.00 0.00 39.59 3.01
187 188 7.528307 AGTACTATACTTGACAACTCGAAGTG 58.472 38.462 0.00 0.00 34.86 3.16
188 189 5.162075 ACTATACTTGACAACTCGAAGTGC 58.838 41.667 0.00 0.00 32.27 4.40
189 190 2.309528 ACTTGACAACTCGAAGTGCA 57.690 45.000 0.00 0.00 0.00 4.57
190 191 2.205074 ACTTGACAACTCGAAGTGCAG 58.795 47.619 0.00 0.00 0.00 4.41
191 192 2.159099 ACTTGACAACTCGAAGTGCAGA 60.159 45.455 0.00 0.00 0.00 4.26
192 193 1.852942 TGACAACTCGAAGTGCAGAC 58.147 50.000 0.00 0.00 0.00 3.51
193 194 0.778815 GACAACTCGAAGTGCAGACG 59.221 55.000 0.00 0.00 0.00 4.18
194 195 0.384309 ACAACTCGAAGTGCAGACGA 59.616 50.000 8.95 8.95 34.90 4.20
195 196 1.202371 ACAACTCGAAGTGCAGACGAA 60.202 47.619 10.18 0.00 35.70 3.85
196 197 1.858458 CAACTCGAAGTGCAGACGAAA 59.142 47.619 10.18 0.00 35.70 3.46
197 198 2.218953 ACTCGAAGTGCAGACGAAAA 57.781 45.000 10.18 0.00 35.70 2.29
198 199 2.546778 ACTCGAAGTGCAGACGAAAAA 58.453 42.857 10.18 0.00 35.70 1.94
214 215 2.245159 AAAAAGCAGGCTTCCTTTGC 57.755 45.000 7.03 0.00 34.84 3.68
215 216 1.122227 AAAAGCAGGCTTCCTTTGCA 58.878 45.000 7.03 0.00 40.22 4.08
216 217 0.677842 AAAGCAGGCTTCCTTTGCAG 59.322 50.000 7.03 0.00 40.22 4.41
217 218 0.468771 AAGCAGGCTTCCTTTGCAGT 60.469 50.000 0.00 0.00 40.22 4.40
218 219 0.401738 AGCAGGCTTCCTTTGCAGTA 59.598 50.000 0.00 0.00 40.22 2.74
219 220 0.807496 GCAGGCTTCCTTTGCAGTAG 59.193 55.000 0.00 0.00 37.75 2.57
220 221 1.611673 GCAGGCTTCCTTTGCAGTAGA 60.612 52.381 0.00 0.00 37.75 2.59
221 222 2.079925 CAGGCTTCCTTTGCAGTAGAC 58.920 52.381 0.00 0.00 0.00 2.59
222 223 1.003696 AGGCTTCCTTTGCAGTAGACC 59.996 52.381 0.00 0.00 0.00 3.85
223 224 1.271379 GGCTTCCTTTGCAGTAGACCA 60.271 52.381 0.00 0.00 0.00 4.02
224 225 2.619074 GGCTTCCTTTGCAGTAGACCAT 60.619 50.000 0.00 0.00 0.00 3.55
225 226 3.370527 GGCTTCCTTTGCAGTAGACCATA 60.371 47.826 0.00 0.00 0.00 2.74
226 227 4.455606 GCTTCCTTTGCAGTAGACCATAT 58.544 43.478 0.00 0.00 0.00 1.78
227 228 4.513318 GCTTCCTTTGCAGTAGACCATATC 59.487 45.833 0.00 0.00 0.00 1.63
228 229 5.674525 CTTCCTTTGCAGTAGACCATATCA 58.325 41.667 0.00 0.00 0.00 2.15
229 230 5.692115 TCCTTTGCAGTAGACCATATCAA 57.308 39.130 0.00 0.00 0.00 2.57
230 231 6.252599 TCCTTTGCAGTAGACCATATCAAT 57.747 37.500 0.00 0.00 0.00 2.57
231 232 6.662755 TCCTTTGCAGTAGACCATATCAATT 58.337 36.000 0.00 0.00 0.00 2.32
232 233 6.543465 TCCTTTGCAGTAGACCATATCAATTG 59.457 38.462 0.00 0.00 0.00 2.32
233 234 6.319658 CCTTTGCAGTAGACCATATCAATTGT 59.680 38.462 5.13 0.00 0.00 2.71
234 235 6.925610 TTGCAGTAGACCATATCAATTGTC 57.074 37.500 5.13 0.00 0.00 3.18
235 236 5.368145 TGCAGTAGACCATATCAATTGTCC 58.632 41.667 5.13 0.00 29.87 4.02
236 237 4.757149 GCAGTAGACCATATCAATTGTCCC 59.243 45.833 5.13 0.00 29.87 4.46
237 238 4.991056 CAGTAGACCATATCAATTGTCCCG 59.009 45.833 5.13 0.00 29.87 5.14
238 239 4.899457 AGTAGACCATATCAATTGTCCCGA 59.101 41.667 5.13 0.00 29.87 5.14
239 240 4.073293 AGACCATATCAATTGTCCCGAC 57.927 45.455 5.13 0.00 29.87 4.79
240 241 3.711704 AGACCATATCAATTGTCCCGACT 59.288 43.478 5.13 0.00 29.87 4.18
241 242 4.058817 GACCATATCAATTGTCCCGACTC 58.941 47.826 5.13 0.00 0.00 3.36
242 243 3.711704 ACCATATCAATTGTCCCGACTCT 59.288 43.478 5.13 0.00 0.00 3.24
243 244 4.202264 ACCATATCAATTGTCCCGACTCTC 60.202 45.833 5.13 0.00 0.00 3.20
244 245 4.202253 CCATATCAATTGTCCCGACTCTCA 60.202 45.833 5.13 0.00 0.00 3.27
245 246 3.981071 ATCAATTGTCCCGACTCTCAA 57.019 42.857 5.13 0.00 0.00 3.02
246 247 3.319137 TCAATTGTCCCGACTCTCAAG 57.681 47.619 5.13 0.00 0.00 3.02
247 248 2.632996 TCAATTGTCCCGACTCTCAAGT 59.367 45.455 5.13 0.00 38.88 3.16
248 249 3.071023 TCAATTGTCCCGACTCTCAAGTT 59.929 43.478 5.13 0.00 35.28 2.66
249 250 4.282449 TCAATTGTCCCGACTCTCAAGTTA 59.718 41.667 5.13 0.00 35.28 2.24
250 251 3.655276 TTGTCCCGACTCTCAAGTTAC 57.345 47.619 0.00 0.00 35.28 2.50
251 252 2.589720 TGTCCCGACTCTCAAGTTACA 58.410 47.619 0.00 0.00 35.28 2.41
252 253 2.557056 TGTCCCGACTCTCAAGTTACAG 59.443 50.000 0.00 0.00 35.28 2.74
253 254 2.818432 GTCCCGACTCTCAAGTTACAGA 59.182 50.000 0.00 0.00 35.28 3.41
254 255 3.082548 TCCCGACTCTCAAGTTACAGAG 58.917 50.000 8.78 8.78 41.81 3.35
255 256 2.164624 CCCGACTCTCAAGTTACAGAGG 59.835 54.545 13.21 0.57 40.57 3.69
256 257 2.164624 CCGACTCTCAAGTTACAGAGGG 59.835 54.545 13.21 3.69 40.57 4.30
257 258 3.082548 CGACTCTCAAGTTACAGAGGGA 58.917 50.000 10.83 0.00 40.57 4.20
258 259 3.127895 CGACTCTCAAGTTACAGAGGGAG 59.872 52.174 10.83 4.77 40.57 4.30
259 260 3.436243 ACTCTCAAGTTACAGAGGGAGG 58.564 50.000 10.83 1.32 40.57 4.30
260 261 3.076182 ACTCTCAAGTTACAGAGGGAGGA 59.924 47.826 10.83 0.00 40.57 3.71
261 262 3.699038 CTCTCAAGTTACAGAGGGAGGAG 59.301 52.174 0.00 0.00 34.19 3.69
262 263 3.333980 TCTCAAGTTACAGAGGGAGGAGA 59.666 47.826 5.31 0.00 32.76 3.71
263 264 3.432378 TCAAGTTACAGAGGGAGGAGAC 58.568 50.000 0.00 0.00 0.00 3.36
264 265 2.498078 CAAGTTACAGAGGGAGGAGACC 59.502 54.545 0.00 0.00 0.00 3.85
272 273 3.648694 GGAGGAGACCCACCCATC 58.351 66.667 0.00 0.00 37.24 3.51
273 274 1.003573 GGAGGAGACCCACCCATCT 59.996 63.158 0.00 0.00 37.24 2.90
274 275 1.341156 GGAGGAGACCCACCCATCTG 61.341 65.000 0.00 0.00 37.24 2.90
275 276 1.977293 GAGGAGACCCACCCATCTGC 61.977 65.000 0.00 0.00 33.75 4.26
276 277 2.300967 GGAGACCCACCCATCTGCA 61.301 63.158 0.00 0.00 33.76 4.41
277 278 1.222936 GAGACCCACCCATCTGCAG 59.777 63.158 7.63 7.63 0.00 4.41
278 279 1.229625 AGACCCACCCATCTGCAGA 60.230 57.895 20.79 20.79 0.00 4.26
279 280 1.078143 GACCCACCCATCTGCAGAC 60.078 63.158 20.97 0.00 0.00 3.51
280 281 2.124983 CCCACCCATCTGCAGACG 60.125 66.667 20.97 11.55 0.00 4.18
281 282 2.124983 CCACCCATCTGCAGACGG 60.125 66.667 21.99 21.99 0.00 4.79
282 283 2.821366 CACCCATCTGCAGACGGC 60.821 66.667 23.45 0.00 45.13 5.68
292 293 3.389741 GCAGACGGCAAACATCAAG 57.610 52.632 0.00 0.00 43.97 3.02
293 294 0.109597 GCAGACGGCAAACATCAAGG 60.110 55.000 0.00 0.00 43.97 3.61
294 295 1.522668 CAGACGGCAAACATCAAGGA 58.477 50.000 0.00 0.00 0.00 3.36
295 296 1.466167 CAGACGGCAAACATCAAGGAG 59.534 52.381 0.00 0.00 0.00 3.69
296 297 0.804989 GACGGCAAACATCAAGGAGG 59.195 55.000 0.00 0.00 0.00 4.30
297 298 1.244019 ACGGCAAACATCAAGGAGGC 61.244 55.000 0.00 0.00 0.00 4.70
298 299 1.508088 GGCAAACATCAAGGAGGCG 59.492 57.895 0.00 0.00 0.00 5.52
299 300 0.960364 GGCAAACATCAAGGAGGCGA 60.960 55.000 0.00 0.00 0.00 5.54
300 301 0.449388 GCAAACATCAAGGAGGCGAG 59.551 55.000 0.00 0.00 0.00 5.03
301 302 1.945819 GCAAACATCAAGGAGGCGAGA 60.946 52.381 0.00 0.00 0.00 4.04
302 303 2.426522 CAAACATCAAGGAGGCGAGAA 58.573 47.619 0.00 0.00 0.00 2.87
303 304 2.813754 CAAACATCAAGGAGGCGAGAAA 59.186 45.455 0.00 0.00 0.00 2.52
304 305 2.100605 ACATCAAGGAGGCGAGAAAC 57.899 50.000 0.00 0.00 0.00 2.78
305 306 1.347707 ACATCAAGGAGGCGAGAAACA 59.652 47.619 0.00 0.00 0.00 2.83
306 307 1.734465 CATCAAGGAGGCGAGAAACAC 59.266 52.381 0.00 0.00 0.00 3.32
307 308 0.319555 TCAAGGAGGCGAGAAACACG 60.320 55.000 0.00 0.00 0.00 4.49
308 309 1.004918 AAGGAGGCGAGAAACACGG 60.005 57.895 0.00 0.00 0.00 4.94
313 314 3.774702 GCGAGAAACACGGCGGAC 61.775 66.667 13.24 0.00 0.00 4.79
314 315 3.110178 CGAGAAACACGGCGGACC 61.110 66.667 13.24 0.00 0.00 4.46
326 327 4.415332 CGGACCGTCACCCGTCAG 62.415 72.222 5.48 0.00 40.78 3.51
327 328 2.987547 GGACCGTCACCCGTCAGA 60.988 66.667 0.00 0.00 33.66 3.27
328 329 2.567497 GGACCGTCACCCGTCAGAA 61.567 63.158 0.00 0.00 33.66 3.02
329 330 1.080705 GACCGTCACCCGTCAGAAG 60.081 63.158 0.00 0.00 33.66 2.85
330 331 2.432628 CCGTCACCCGTCAGAAGC 60.433 66.667 0.00 0.00 33.66 3.86
331 332 2.651361 CGTCACCCGTCAGAAGCT 59.349 61.111 0.00 0.00 0.00 3.74
332 333 1.734477 CGTCACCCGTCAGAAGCTG 60.734 63.158 0.00 0.00 0.00 4.24
333 334 1.374758 GTCACCCGTCAGAAGCTGG 60.375 63.158 0.00 0.00 31.51 4.85
335 336 3.322466 ACCCGTCAGAAGCTGGGG 61.322 66.667 9.24 5.75 46.38 4.96
336 337 3.003173 CCCGTCAGAAGCTGGGGA 61.003 66.667 3.49 0.00 35.76 4.81
337 338 2.370445 CCCGTCAGAAGCTGGGGAT 61.370 63.158 3.49 0.00 35.76 3.85
338 339 1.153289 CCGTCAGAAGCTGGGGATG 60.153 63.158 0.00 0.00 30.78 3.51
339 340 1.817099 CGTCAGAAGCTGGGGATGC 60.817 63.158 0.00 0.00 31.51 3.91
340 341 1.452833 GTCAGAAGCTGGGGATGCC 60.453 63.158 0.00 0.00 31.51 4.40
341 342 2.123982 CAGAAGCTGGGGATGCCC 60.124 66.667 16.99 16.99 44.51 5.36
350 351 4.018409 GGGATGCCCAGGACAAAC 57.982 61.111 0.00 0.00 44.65 2.93
351 352 1.384191 GGGATGCCCAGGACAAACT 59.616 57.895 0.00 0.00 44.65 2.66
352 353 0.623723 GGGATGCCCAGGACAAACTA 59.376 55.000 0.00 0.00 44.65 2.24
353 354 1.408822 GGGATGCCCAGGACAAACTAG 60.409 57.143 0.00 0.00 44.65 2.57
354 355 1.559682 GGATGCCCAGGACAAACTAGA 59.440 52.381 0.00 0.00 0.00 2.43
355 356 2.026262 GGATGCCCAGGACAAACTAGAA 60.026 50.000 0.00 0.00 0.00 2.10
356 357 2.859165 TGCCCAGGACAAACTAGAAG 57.141 50.000 0.00 0.00 0.00 2.85
357 358 2.334977 TGCCCAGGACAAACTAGAAGA 58.665 47.619 0.00 0.00 0.00 2.87
358 359 2.303022 TGCCCAGGACAAACTAGAAGAG 59.697 50.000 0.00 0.00 0.00 2.85
359 360 2.355209 GCCCAGGACAAACTAGAAGAGG 60.355 54.545 0.00 0.00 0.00 3.69
360 361 2.355209 CCCAGGACAAACTAGAAGAGGC 60.355 54.545 0.00 0.00 0.00 4.70
361 362 2.569404 CCAGGACAAACTAGAAGAGGCT 59.431 50.000 0.00 0.00 0.00 4.58
362 363 3.368948 CCAGGACAAACTAGAAGAGGCTC 60.369 52.174 6.34 6.34 0.00 4.70
363 364 3.259374 CAGGACAAACTAGAAGAGGCTCA 59.741 47.826 18.26 0.00 0.00 4.26
364 365 3.513515 AGGACAAACTAGAAGAGGCTCAG 59.486 47.826 18.26 7.67 0.00 3.35
365 366 3.511934 GGACAAACTAGAAGAGGCTCAGA 59.488 47.826 18.26 0.00 0.00 3.27
366 367 4.021016 GGACAAACTAGAAGAGGCTCAGAA 60.021 45.833 18.26 0.00 0.00 3.02
367 368 5.337975 GGACAAACTAGAAGAGGCTCAGAAT 60.338 44.000 18.26 2.02 0.00 2.40
368 369 6.127310 GGACAAACTAGAAGAGGCTCAGAATA 60.127 42.308 18.26 3.14 0.00 1.75
369 370 7.418483 GGACAAACTAGAAGAGGCTCAGAATAT 60.418 40.741 18.26 0.00 0.00 1.28
370 371 7.271511 ACAAACTAGAAGAGGCTCAGAATATG 58.728 38.462 18.26 8.24 0.00 1.78
371 372 5.467035 ACTAGAAGAGGCTCAGAATATGC 57.533 43.478 18.26 0.00 0.00 3.14
372 373 5.147032 ACTAGAAGAGGCTCAGAATATGCT 58.853 41.667 18.26 0.80 0.00 3.79
373 374 4.339872 AGAAGAGGCTCAGAATATGCTG 57.660 45.455 18.26 4.04 37.24 4.41
374 375 2.547299 AGAGGCTCAGAATATGCTGC 57.453 50.000 18.26 0.00 35.86 5.25
375 376 2.048601 AGAGGCTCAGAATATGCTGCT 58.951 47.619 18.26 0.00 35.86 4.24
376 377 2.144730 GAGGCTCAGAATATGCTGCTG 58.855 52.381 10.25 2.80 35.86 4.41
377 378 0.592148 GGCTCAGAATATGCTGCTGC 59.408 55.000 15.86 15.86 35.86 5.25
378 379 1.595466 GCTCAGAATATGCTGCTGCT 58.405 50.000 17.00 5.09 40.48 4.24
379 380 1.264557 GCTCAGAATATGCTGCTGCTG 59.735 52.381 17.00 0.77 40.48 4.41
380 381 1.874231 CTCAGAATATGCTGCTGCTGG 59.126 52.381 17.00 0.00 40.48 4.85
381 382 1.211212 TCAGAATATGCTGCTGCTGGT 59.789 47.619 17.00 5.65 40.48 4.00
385 386 0.256752 ATATGCTGCTGCTGGTGGAA 59.743 50.000 17.00 0.00 40.48 3.53
417 418 2.343758 GCTCAAGACCGACCTGCA 59.656 61.111 0.00 0.00 0.00 4.41
425 426 4.504916 CCGACCTGCAGGAGCTCG 62.505 72.222 39.19 32.92 42.74 5.03
427 428 3.768922 GACCTGCAGGAGCTCGCT 61.769 66.667 39.19 15.22 42.74 4.93
428 429 3.714871 GACCTGCAGGAGCTCGCTC 62.715 68.421 39.19 19.98 42.74 5.03
435 436 0.171455 CAGGAGCTCGCTCTTAACGT 59.829 55.000 17.48 0.00 42.38 3.99
443 444 1.144969 CGCTCTTAACGTTCTTGGCA 58.855 50.000 2.82 0.00 0.00 4.92
450 451 6.673316 GCTCTTAACGTTCTTGGCATTCTTAG 60.673 42.308 2.82 0.00 0.00 2.18
461 462 2.158885 GGCATTCTTAGGGTGGAGAGAC 60.159 54.545 0.00 0.00 0.00 3.36
475 476 3.262660 TGGAGAGACTGAGCATGAACATT 59.737 43.478 0.00 0.00 0.00 2.71
485 486 6.148480 ACTGAGCATGAACATTGAGAACTAAC 59.852 38.462 0.00 0.00 0.00 2.34
492 493 8.725148 CATGAACATTGAGAACTAACTAAGCTT 58.275 33.333 3.48 3.48 0.00 3.74
509 510 4.122143 AGCTTAGAAGTTGAGCTAGCTG 57.878 45.455 24.99 4.34 44.41 4.24
510 511 3.513515 AGCTTAGAAGTTGAGCTAGCTGT 59.486 43.478 24.99 0.00 44.41 4.40
511 512 4.020662 AGCTTAGAAGTTGAGCTAGCTGTT 60.021 41.667 24.99 9.93 44.41 3.16
512 513 5.186021 AGCTTAGAAGTTGAGCTAGCTGTTA 59.814 40.000 24.99 5.31 44.41 2.41
513 514 6.045955 GCTTAGAAGTTGAGCTAGCTGTTAT 58.954 40.000 24.99 9.73 33.72 1.89
514 515 6.019156 GCTTAGAAGTTGAGCTAGCTGTTATG 60.019 42.308 24.99 7.00 33.72 1.90
515 516 4.764172 AGAAGTTGAGCTAGCTGTTATGG 58.236 43.478 24.99 0.00 0.00 2.74
516 517 4.467795 AGAAGTTGAGCTAGCTGTTATGGA 59.532 41.667 24.99 0.00 0.00 3.41
534 535 7.816995 TGTTATGGAATTATGGTTTCTTGTTGC 59.183 33.333 0.00 0.00 0.00 4.17
554 563 9.672086 TTGTTGCTCAAGTGTTGTAATATAAAC 57.328 29.630 0.00 0.00 0.00 2.01
583 592 8.422577 AATCCTACTATTTTGCTTCCAAAGTT 57.577 30.769 0.00 0.00 41.58 2.66
613 622 4.094887 CGATCCAAACAATTTCGACCATCT 59.905 41.667 0.00 0.00 31.74 2.90
719 731 5.243060 ACTGTGAATACTAAAAACCCAAGCC 59.757 40.000 0.00 0.00 0.00 4.35
720 732 5.141182 TGTGAATACTAAAAACCCAAGCCA 58.859 37.500 0.00 0.00 0.00 4.75
721 733 5.598830 TGTGAATACTAAAAACCCAAGCCAA 59.401 36.000 0.00 0.00 0.00 4.52
785 818 0.991920 ACTTGTGTACTCCATGGGGG 59.008 55.000 18.14 10.25 38.37 5.40
786 819 0.991920 CTTGTGTACTCCATGGGGGT 59.008 55.000 18.14 15.62 38.11 4.95
787 820 0.695924 TTGTGTACTCCATGGGGGTG 59.304 55.000 18.14 5.05 38.11 4.61
810 846 7.095187 GGTGCTAGACCATTATACAATACAAGC 60.095 40.741 0.00 0.00 45.34 4.01
850 889 2.279741 ACATGTTAGCAGCCGTGTATG 58.720 47.619 0.00 0.00 0.00 2.39
884 923 2.290641 ACTCGTCACAGCCAATTGTTTC 59.709 45.455 4.43 0.00 0.00 2.78
900 939 7.061094 CCAATTGTTTCGAGACTTTTCTATTGC 59.939 37.037 7.68 0.00 29.47 3.56
905 944 4.166523 TCGAGACTTTTCTATTGCGTGAG 58.833 43.478 0.00 0.00 29.47 3.51
923 962 4.034510 CGTGAGAAAACTCTGCAAGACTTT 59.965 41.667 0.00 3.06 38.67 2.66
938 977 4.464069 AGACTTTGCAGAGGCTAGTTAG 57.536 45.455 11.71 0.00 41.91 2.34
950 989 3.056749 AGGCTAGTTAGTTTGTCCAGACG 60.057 47.826 0.00 0.00 0.00 4.18
1038 1081 3.942115 CTGTAGTCACAGCTGAGCTAGTA 59.058 47.826 23.35 6.75 45.44 1.82
1136 1179 0.035630 AGATTGCAGCACCTCCTGAC 60.036 55.000 0.00 0.00 34.77 3.51
1182 1225 1.202651 GCAGATGGGCGGTACATAACT 60.203 52.381 0.00 0.00 0.00 2.24
1206 1249 2.617308 CTCTGGGATGTTATTGCAGCTG 59.383 50.000 10.11 10.11 0.00 4.24
1285 1328 0.773644 AACCCTCCAAGACAGTGCAT 59.226 50.000 0.00 0.00 0.00 3.96
1366 1409 5.450376 TTTCAAGCGTTCTCGAACATATC 57.550 39.130 10.10 0.00 41.20 1.63
1390 1434 1.637553 AGAAGGATGACAAGGCCATGT 59.362 47.619 14.67 14.67 35.90 3.21
1409 1453 0.900182 TGCCTCGAGTCAGATGGTGT 60.900 55.000 12.31 0.00 0.00 4.16
1411 1455 1.177401 CCTCGAGTCAGATGGTGTCA 58.823 55.000 12.31 0.00 0.00 3.58
1427 1471 4.518970 TGGTGTCATGGAAAGCTTAGAAAC 59.481 41.667 0.00 0.00 0.00 2.78
1429 1473 5.938125 GGTGTCATGGAAAGCTTAGAAACTA 59.062 40.000 0.00 0.00 0.00 2.24
1440 1484 7.693969 AAGCTTAGAAACTATTGTTGCTCAT 57.306 32.000 3.58 0.00 41.02 2.90
1523 1567 7.880713 TGATGTTTATCTTTACACCAACAGCTA 59.119 33.333 0.00 0.00 32.95 3.32
1526 1570 7.172532 TGTTTATCTTTACACCAACAGCTACAG 59.827 37.037 0.00 0.00 0.00 2.74
1593 1637 2.048603 GCACAACATCCCTCCTGGC 61.049 63.158 0.00 0.00 0.00 4.85
1607 1653 0.390492 CCTGGCGATCATGCACTAGA 59.610 55.000 0.00 0.00 36.28 2.43
1623 1669 4.742659 GCACTAGAAGTTCTTCCGATCATC 59.257 45.833 11.40 0.00 0.00 2.92
1791 1838 5.699097 TGTTGGTAGTTATTGAGTTTGCC 57.301 39.130 0.00 0.00 0.00 4.52
1876 1923 5.967674 GGAAGCAAAATCATCATCGTAAGTG 59.032 40.000 0.00 0.00 39.48 3.16
1922 1969 5.076182 TGGATCAGTGCAACCTATTTTTCA 58.924 37.500 0.00 0.00 37.80 2.69
1965 2012 7.607250 ACGAGTTGAGATATCTTTTCAAGACT 58.393 34.615 6.70 2.54 41.01 3.24
2114 2161 3.056465 AGAAGGAACCTCGATGTTCAGTC 60.056 47.826 27.53 23.00 45.12 3.51
2210 2257 1.003696 GCTTCTAGAACAAGGCCACCT 59.996 52.381 5.01 0.00 33.87 4.00
2230 2286 6.931838 CACCTAGTGGACATAACTGACTTTA 58.068 40.000 0.00 0.00 37.04 1.85
2296 2352 6.778821 TCAATCAAGGAAGAATCACCAAGTA 58.221 36.000 0.00 0.00 0.00 2.24
2320 2376 1.284785 CATTGGGGGAACTTCTAGCCA 59.715 52.381 0.00 0.00 0.00 4.75
2340 2396 3.181454 CCAATCCTAGCGTTAGACCCAAT 60.181 47.826 8.00 0.00 0.00 3.16
2401 2457 2.028778 GCAACACATTTGCCCGCA 59.971 55.556 0.00 0.00 39.38 5.69
2471 2533 1.153804 GGAGGAAACGACGAGGAGC 60.154 63.158 0.00 0.00 0.00 4.70
2478 2540 4.514577 CGACGAGGAGCGCCCATT 62.515 66.667 15.92 0.00 46.04 3.16
2566 2642 5.839621 ATGTGTTCATGTATACGGAGTACC 58.160 41.667 0.00 0.00 38.25 3.34
2591 2667 8.266682 CCGTTGAACTAAATGTATTACAGATCG 58.733 37.037 2.53 0.00 0.00 3.69
2624 2700 9.311916 ACGTACAGTAAACTTGTATGTTTTACA 57.688 29.630 4.83 0.00 40.23 2.41
2698 2774 7.575414 TCAGTAATGGTGCTTTACAAGAAAA 57.425 32.000 0.00 0.00 33.02 2.29
2707 2783 7.502895 TGGTGCTTTACAAGAAAAAGGTACATA 59.497 33.333 0.00 0.00 35.04 2.29
2711 2787 9.341899 GCTTTACAAGAAAAAGGTACATACATG 57.658 33.333 0.00 0.00 35.04 3.21
2721 2812 7.895975 AAAGGTACATACATGATCATCATCG 57.104 36.000 4.86 0.00 34.28 3.84
2744 2835 7.970384 TCGCATTTTACTAAAGTTGATACCAG 58.030 34.615 0.00 0.00 0.00 4.00
2753 2844 8.324163 ACTAAAGTTGATACCAGTGATGAAAC 57.676 34.615 0.00 0.00 0.00 2.78
2787 2882 2.426522 CTGTCGTGTGGATGTGGATTT 58.573 47.619 0.00 0.00 0.00 2.17
2788 2883 2.150390 TGTCGTGTGGATGTGGATTTG 58.850 47.619 0.00 0.00 0.00 2.32
2794 2889 4.498850 CGTGTGGATGTGGATTTGACAAAA 60.499 41.667 4.41 0.00 0.00 2.44
3438 3533 2.770048 CCTTCCCGGCCCAGATCT 60.770 66.667 0.00 0.00 0.00 2.75
3439 3534 2.507944 CTTCCCGGCCCAGATCTG 59.492 66.667 16.24 16.24 0.00 2.90
3449 3544 2.892025 CCAGATCTGGGCCCTTTTG 58.108 57.895 31.14 12.87 46.81 2.44
3450 3545 0.685458 CCAGATCTGGGCCCTTTTGG 60.685 60.000 31.14 17.87 46.81 3.28
3462 3557 1.188863 CCTTTTGGGCTCAATCTGGG 58.811 55.000 0.00 0.00 35.46 4.45
3463 3558 1.550869 CCTTTTGGGCTCAATCTGGGT 60.551 52.381 0.00 0.00 35.46 4.51
3464 3559 1.821136 CTTTTGGGCTCAATCTGGGTC 59.179 52.381 0.00 0.00 32.28 4.46
3465 3560 1.075601 TTTGGGCTCAATCTGGGTCT 58.924 50.000 0.00 0.00 32.28 3.85
3466 3561 0.329261 TTGGGCTCAATCTGGGTCTG 59.671 55.000 0.00 0.00 0.00 3.51
3467 3562 1.225704 GGGCTCAATCTGGGTCTGG 59.774 63.158 0.00 0.00 0.00 3.86
3468 3563 1.225704 GGCTCAATCTGGGTCTGGG 59.774 63.158 0.00 0.00 0.00 4.45
3469 3564 1.452833 GCTCAATCTGGGTCTGGGC 60.453 63.158 0.00 0.00 0.00 5.36
3470 3565 1.153289 CTCAATCTGGGTCTGGGCG 60.153 63.158 0.00 0.00 0.00 6.13
3471 3566 2.124570 CAATCTGGGTCTGGGCGG 60.125 66.667 0.00 0.00 0.00 6.13
3472 3567 3.411517 AATCTGGGTCTGGGCGGG 61.412 66.667 0.00 0.00 0.00 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.934023 TTGGAGTCAAAATACTATTGAAAGGT 57.066 30.769 0.00 0.00 38.44 3.50
1 2 9.793252 CATTGGAGTCAAAATACTATTGAAAGG 57.207 33.333 0.00 0.00 38.44 3.11
6 7 9.123902 TGGATCATTGGAGTCAAAATACTATTG 57.876 33.333 0.00 0.00 36.36 1.90
7 8 9.699410 TTGGATCATTGGAGTCAAAATACTATT 57.301 29.630 0.00 0.00 36.36 1.73
8 9 9.872684 ATTGGATCATTGGAGTCAAAATACTAT 57.127 29.630 0.00 0.00 36.36 2.12
9 10 9.342308 GATTGGATCATTGGAGTCAAAATACTA 57.658 33.333 0.00 0.00 36.36 1.82
10 11 7.835682 TGATTGGATCATTGGAGTCAAAATACT 59.164 33.333 0.00 0.00 36.36 2.12
11 12 7.999679 TGATTGGATCATTGGAGTCAAAATAC 58.000 34.615 0.00 0.00 36.36 1.89
12 13 8.054572 TCTGATTGGATCATTGGAGTCAAAATA 58.945 33.333 0.00 0.00 38.85 1.40
13 14 6.893554 TCTGATTGGATCATTGGAGTCAAAAT 59.106 34.615 0.00 0.00 38.85 1.82
14 15 6.151648 GTCTGATTGGATCATTGGAGTCAAAA 59.848 38.462 0.00 0.00 38.85 2.44
15 16 5.649395 GTCTGATTGGATCATTGGAGTCAAA 59.351 40.000 0.00 0.00 38.85 2.69
16 17 5.188434 GTCTGATTGGATCATTGGAGTCAA 58.812 41.667 0.00 0.00 38.85 3.18
17 18 4.225717 TGTCTGATTGGATCATTGGAGTCA 59.774 41.667 0.00 0.00 38.85 3.41
18 19 4.774124 TGTCTGATTGGATCATTGGAGTC 58.226 43.478 0.00 0.00 38.85 3.36
19 20 4.849813 TGTCTGATTGGATCATTGGAGT 57.150 40.909 0.00 0.00 38.85 3.85
20 21 4.579340 CCTTGTCTGATTGGATCATTGGAG 59.421 45.833 0.00 0.00 38.85 3.86
21 22 4.529897 CCTTGTCTGATTGGATCATTGGA 58.470 43.478 0.00 0.00 38.85 3.53
22 23 3.067742 GCCTTGTCTGATTGGATCATTGG 59.932 47.826 0.00 0.00 38.85 3.16
23 24 3.697542 TGCCTTGTCTGATTGGATCATTG 59.302 43.478 0.00 0.00 38.85 2.82
24 25 3.952323 CTGCCTTGTCTGATTGGATCATT 59.048 43.478 0.00 0.00 38.85 2.57
25 26 3.201487 TCTGCCTTGTCTGATTGGATCAT 59.799 43.478 0.00 0.00 38.85 2.45
26 27 2.573009 TCTGCCTTGTCTGATTGGATCA 59.427 45.455 0.00 0.00 37.76 2.92
27 28 3.118482 TCTCTGCCTTGTCTGATTGGATC 60.118 47.826 0.00 0.00 0.00 3.36
28 29 2.842496 TCTCTGCCTTGTCTGATTGGAT 59.158 45.455 0.00 0.00 0.00 3.41
29 30 2.235650 CTCTCTGCCTTGTCTGATTGGA 59.764 50.000 0.00 0.00 0.00 3.53
30 31 2.235650 TCTCTCTGCCTTGTCTGATTGG 59.764 50.000 0.00 0.00 0.00 3.16
31 32 3.195182 TCTCTCTCTGCCTTGTCTGATTG 59.805 47.826 0.00 0.00 0.00 2.67
32 33 3.439154 TCTCTCTCTGCCTTGTCTGATT 58.561 45.455 0.00 0.00 0.00 2.57
33 34 3.098774 TCTCTCTCTGCCTTGTCTGAT 57.901 47.619 0.00 0.00 0.00 2.90
34 35 2.560542 GTTCTCTCTCTGCCTTGTCTGA 59.439 50.000 0.00 0.00 0.00 3.27
35 36 2.670789 CGTTCTCTCTCTGCCTTGTCTG 60.671 54.545 0.00 0.00 0.00 3.51
36 37 1.543802 CGTTCTCTCTCTGCCTTGTCT 59.456 52.381 0.00 0.00 0.00 3.41
37 38 1.271102 ACGTTCTCTCTCTGCCTTGTC 59.729 52.381 0.00 0.00 0.00 3.18
38 39 1.000283 CACGTTCTCTCTCTGCCTTGT 60.000 52.381 0.00 0.00 0.00 3.16
39 40 1.671261 CCACGTTCTCTCTCTGCCTTG 60.671 57.143 0.00 0.00 0.00 3.61
40 41 0.605589 CCACGTTCTCTCTCTGCCTT 59.394 55.000 0.00 0.00 0.00 4.35
41 42 0.251386 TCCACGTTCTCTCTCTGCCT 60.251 55.000 0.00 0.00 0.00 4.75
42 43 0.603569 TTCCACGTTCTCTCTCTGCC 59.396 55.000 0.00 0.00 0.00 4.85
43 44 2.663826 ATTCCACGTTCTCTCTCTGC 57.336 50.000 0.00 0.00 0.00 4.26
44 45 6.142818 AGATAATTCCACGTTCTCTCTCTG 57.857 41.667 0.00 0.00 0.00 3.35
45 46 7.883391 TTAGATAATTCCACGTTCTCTCTCT 57.117 36.000 0.00 0.00 0.00 3.10
46 47 8.809478 GTTTTAGATAATTCCACGTTCTCTCTC 58.191 37.037 0.00 0.00 0.00 3.20
47 48 7.764901 GGTTTTAGATAATTCCACGTTCTCTCT 59.235 37.037 0.00 0.00 0.00 3.10
48 49 7.764901 AGGTTTTAGATAATTCCACGTTCTCTC 59.235 37.037 0.00 0.00 0.00 3.20
49 50 7.621796 AGGTTTTAGATAATTCCACGTTCTCT 58.378 34.615 0.00 0.00 0.00 3.10
50 51 7.845066 AGGTTTTAGATAATTCCACGTTCTC 57.155 36.000 0.00 0.00 0.00 2.87
51 52 8.512138 CAAAGGTTTTAGATAATTCCACGTTCT 58.488 33.333 0.00 0.00 0.00 3.01
52 53 7.272731 GCAAAGGTTTTAGATAATTCCACGTTC 59.727 37.037 0.00 0.00 0.00 3.95
53 54 7.039993 AGCAAAGGTTTTAGATAATTCCACGTT 60.040 33.333 0.00 0.00 0.00 3.99
54 55 6.433093 AGCAAAGGTTTTAGATAATTCCACGT 59.567 34.615 0.00 0.00 0.00 4.49
55 56 6.852664 AGCAAAGGTTTTAGATAATTCCACG 58.147 36.000 0.00 0.00 0.00 4.94
56 57 6.967199 CGAGCAAAGGTTTTAGATAATTCCAC 59.033 38.462 0.00 0.00 0.00 4.02
57 58 6.657541 ACGAGCAAAGGTTTTAGATAATTCCA 59.342 34.615 0.00 0.00 0.00 3.53
58 59 7.085052 ACGAGCAAAGGTTTTAGATAATTCC 57.915 36.000 0.00 0.00 0.00 3.01
59 60 8.234546 TGAACGAGCAAAGGTTTTAGATAATTC 58.765 33.333 0.00 0.00 0.00 2.17
60 61 8.106247 TGAACGAGCAAAGGTTTTAGATAATT 57.894 30.769 0.00 0.00 0.00 1.40
61 62 7.681939 TGAACGAGCAAAGGTTTTAGATAAT 57.318 32.000 0.00 0.00 0.00 1.28
62 63 7.227910 ACTTGAACGAGCAAAGGTTTTAGATAA 59.772 33.333 0.00 0.00 0.00 1.75
63 64 6.708949 ACTTGAACGAGCAAAGGTTTTAGATA 59.291 34.615 0.00 0.00 0.00 1.98
64 65 5.531287 ACTTGAACGAGCAAAGGTTTTAGAT 59.469 36.000 0.00 0.00 0.00 1.98
65 66 4.879545 ACTTGAACGAGCAAAGGTTTTAGA 59.120 37.500 0.00 0.00 0.00 2.10
66 67 4.970003 CACTTGAACGAGCAAAGGTTTTAG 59.030 41.667 0.00 0.00 0.00 1.85
67 68 4.636648 TCACTTGAACGAGCAAAGGTTTTA 59.363 37.500 0.00 0.00 0.00 1.52
68 69 3.442273 TCACTTGAACGAGCAAAGGTTTT 59.558 39.130 0.00 0.00 0.00 2.43
69 70 3.013921 TCACTTGAACGAGCAAAGGTTT 58.986 40.909 0.00 0.00 0.00 3.27
70 71 2.639065 TCACTTGAACGAGCAAAGGTT 58.361 42.857 0.00 0.00 0.00 3.50
71 72 2.325583 TCACTTGAACGAGCAAAGGT 57.674 45.000 0.00 0.00 0.00 3.50
72 73 3.904136 ATTCACTTGAACGAGCAAAGG 57.096 42.857 0.00 0.00 36.80 3.11
73 74 4.153117 AGCTATTCACTTGAACGAGCAAAG 59.847 41.667 21.31 0.00 43.44 2.77
74 75 4.065088 AGCTATTCACTTGAACGAGCAAA 58.935 39.130 21.31 0.00 43.44 3.68
75 76 3.664107 AGCTATTCACTTGAACGAGCAA 58.336 40.909 21.31 0.00 43.44 3.91
76 77 3.319137 AGCTATTCACTTGAACGAGCA 57.681 42.857 21.31 0.00 43.44 4.26
77 78 4.266502 CACTAGCTATTCACTTGAACGAGC 59.733 45.833 15.36 15.36 42.32 5.03
78 79 5.641709 TCACTAGCTATTCACTTGAACGAG 58.358 41.667 0.00 0.00 36.80 4.18
79 80 5.638596 TCACTAGCTATTCACTTGAACGA 57.361 39.130 0.00 0.00 36.80 3.85
80 81 6.893958 ATTCACTAGCTATTCACTTGAACG 57.106 37.500 0.00 0.00 36.80 3.95
81 82 8.812329 CACTATTCACTAGCTATTCACTTGAAC 58.188 37.037 0.00 0.00 36.80 3.18
82 83 7.492669 GCACTATTCACTAGCTATTCACTTGAA 59.507 37.037 0.00 0.00 38.56 2.69
83 84 6.980978 GCACTATTCACTAGCTATTCACTTGA 59.019 38.462 0.00 0.00 0.00 3.02
84 85 6.983307 AGCACTATTCACTAGCTATTCACTTG 59.017 38.462 0.00 0.00 33.06 3.16
85 86 7.118496 AGCACTATTCACTAGCTATTCACTT 57.882 36.000 0.00 0.00 33.06 3.16
86 87 6.723298 AGCACTATTCACTAGCTATTCACT 57.277 37.500 0.00 0.00 33.06 3.41
87 88 8.756864 GTTTAGCACTATTCACTAGCTATTCAC 58.243 37.037 0.00 0.00 37.60 3.18
88 89 8.696374 AGTTTAGCACTATTCACTAGCTATTCA 58.304 33.333 0.00 0.00 37.60 2.57
89 90 9.187455 GAGTTTAGCACTATTCACTAGCTATTC 57.813 37.037 0.00 0.00 37.60 1.75
90 91 8.919145 AGAGTTTAGCACTATTCACTAGCTATT 58.081 33.333 0.00 0.00 37.60 1.73
91 92 8.356657 CAGAGTTTAGCACTATTCACTAGCTAT 58.643 37.037 0.00 0.00 37.60 2.97
92 93 7.339721 ACAGAGTTTAGCACTATTCACTAGCTA 59.660 37.037 0.00 0.00 35.01 3.32
93 94 6.153680 ACAGAGTTTAGCACTATTCACTAGCT 59.846 38.462 0.00 0.00 35.01 3.32
94 95 6.334202 ACAGAGTTTAGCACTATTCACTAGC 58.666 40.000 0.00 0.00 35.01 3.42
95 96 8.764524 AAACAGAGTTTAGCACTATTCACTAG 57.235 34.615 0.00 0.00 35.01 2.57
96 97 8.585881 AGAAACAGAGTTTAGCACTATTCACTA 58.414 33.333 0.00 0.00 35.01 2.74
97 98 7.445945 AGAAACAGAGTTTAGCACTATTCACT 58.554 34.615 0.00 0.00 35.01 3.41
98 99 7.659652 AGAAACAGAGTTTAGCACTATTCAC 57.340 36.000 0.00 0.00 35.01 3.18
99 100 9.772973 TTTAGAAACAGAGTTTAGCACTATTCA 57.227 29.630 0.00 0.00 35.01 2.57
104 105 9.944376 TCATATTTAGAAACAGAGTTTAGCACT 57.056 29.630 0.00 0.00 39.07 4.40
110 111 9.490379 AACGTCTCATATTTAGAAACAGAGTTT 57.510 29.630 0.00 0.00 0.00 2.66
111 112 9.490379 AAACGTCTCATATTTAGAAACAGAGTT 57.510 29.630 0.00 0.00 0.00 3.01
112 113 9.490379 AAAACGTCTCATATTTAGAAACAGAGT 57.510 29.630 0.00 0.00 0.00 3.24
115 116 8.840867 GCAAAAACGTCTCATATTTAGAAACAG 58.159 33.333 0.00 0.00 0.00 3.16
116 117 8.346300 TGCAAAAACGTCTCATATTTAGAAACA 58.654 29.630 0.00 0.00 0.00 2.83
117 118 8.722342 TGCAAAAACGTCTCATATTTAGAAAC 57.278 30.769 0.00 0.00 0.00 2.78
118 119 8.564574 ACTGCAAAAACGTCTCATATTTAGAAA 58.435 29.630 0.00 0.00 0.00 2.52
119 120 8.094798 ACTGCAAAAACGTCTCATATTTAGAA 57.905 30.769 0.00 0.00 0.00 2.10
120 121 7.667043 ACTGCAAAAACGTCTCATATTTAGA 57.333 32.000 0.00 0.00 0.00 2.10
121 122 8.015087 TGAACTGCAAAAACGTCTCATATTTAG 58.985 33.333 0.00 0.00 0.00 1.85
122 123 7.866729 TGAACTGCAAAAACGTCTCATATTTA 58.133 30.769 0.00 0.00 0.00 1.40
123 124 6.734137 TGAACTGCAAAAACGTCTCATATTT 58.266 32.000 0.00 0.00 0.00 1.40
124 125 6.312399 TGAACTGCAAAAACGTCTCATATT 57.688 33.333 0.00 0.00 0.00 1.28
125 126 5.940192 TGAACTGCAAAAACGTCTCATAT 57.060 34.783 0.00 0.00 0.00 1.78
126 127 5.743026 TTGAACTGCAAAAACGTCTCATA 57.257 34.783 0.00 0.00 32.46 2.15
127 128 4.630894 TTGAACTGCAAAAACGTCTCAT 57.369 36.364 0.00 0.00 32.46 2.90
128 129 4.630894 ATTGAACTGCAAAAACGTCTCA 57.369 36.364 0.00 0.00 40.48 3.27
129 130 5.514914 TCAAATTGAACTGCAAAAACGTCTC 59.485 36.000 0.00 0.00 40.48 3.36
130 131 5.406649 TCAAATTGAACTGCAAAAACGTCT 58.593 33.333 0.00 0.00 40.48 4.18
131 132 5.694674 TCAAATTGAACTGCAAAAACGTC 57.305 34.783 0.00 0.00 40.48 4.34
144 145 6.187727 AGTACTCCCTCTGTTCAAATTGAA 57.812 37.500 4.03 4.03 33.32 2.69
145 146 5.825593 AGTACTCCCTCTGTTCAAATTGA 57.174 39.130 0.00 0.00 0.00 2.57
146 147 8.478877 AGTATAGTACTCCCTCTGTTCAAATTG 58.521 37.037 0.00 0.00 32.47 2.32
147 148 8.611051 AGTATAGTACTCCCTCTGTTCAAATT 57.389 34.615 0.00 0.00 32.47 1.82
148 149 8.478877 CAAGTATAGTACTCCCTCTGTTCAAAT 58.521 37.037 0.00 0.00 38.26 2.32
149 150 7.672660 TCAAGTATAGTACTCCCTCTGTTCAAA 59.327 37.037 0.00 0.00 38.26 2.69
150 151 7.122353 GTCAAGTATAGTACTCCCTCTGTTCAA 59.878 40.741 0.00 0.00 38.26 2.69
151 152 6.602406 GTCAAGTATAGTACTCCCTCTGTTCA 59.398 42.308 0.00 0.00 38.26 3.18
152 153 6.602406 TGTCAAGTATAGTACTCCCTCTGTTC 59.398 42.308 0.00 0.00 38.26 3.18
153 154 6.491383 TGTCAAGTATAGTACTCCCTCTGTT 58.509 40.000 0.00 0.00 38.26 3.16
154 155 6.075949 TGTCAAGTATAGTACTCCCTCTGT 57.924 41.667 0.00 0.00 38.26 3.41
155 156 6.603997 AGTTGTCAAGTATAGTACTCCCTCTG 59.396 42.308 0.00 0.00 38.26 3.35
156 157 6.733509 AGTTGTCAAGTATAGTACTCCCTCT 58.266 40.000 0.00 0.00 38.26 3.69
157 158 6.238429 CGAGTTGTCAAGTATAGTACTCCCTC 60.238 46.154 0.00 0.00 38.26 4.30
158 159 5.589452 CGAGTTGTCAAGTATAGTACTCCCT 59.411 44.000 0.00 0.00 38.26 4.20
159 160 5.587844 TCGAGTTGTCAAGTATAGTACTCCC 59.412 44.000 0.00 0.00 38.26 4.30
160 161 6.674694 TCGAGTTGTCAAGTATAGTACTCC 57.325 41.667 0.00 0.00 38.26 3.85
161 162 7.693120 CACTTCGAGTTGTCAAGTATAGTACTC 59.307 40.741 0.00 0.00 38.26 2.59
162 163 7.528307 CACTTCGAGTTGTCAAGTATAGTACT 58.472 38.462 0.00 0.00 41.73 2.73
163 164 6.250951 GCACTTCGAGTTGTCAAGTATAGTAC 59.749 42.308 0.00 0.00 0.00 2.73
164 165 6.072342 TGCACTTCGAGTTGTCAAGTATAGTA 60.072 38.462 0.00 0.00 0.00 1.82
165 166 5.162075 GCACTTCGAGTTGTCAAGTATAGT 58.838 41.667 0.00 0.00 0.00 2.12
166 167 5.161358 TGCACTTCGAGTTGTCAAGTATAG 58.839 41.667 0.00 0.00 0.00 1.31
167 168 5.048294 TCTGCACTTCGAGTTGTCAAGTATA 60.048 40.000 0.00 0.00 0.00 1.47
168 169 3.990092 TGCACTTCGAGTTGTCAAGTAT 58.010 40.909 0.00 0.00 0.00 2.12
169 170 3.067601 TCTGCACTTCGAGTTGTCAAGTA 59.932 43.478 0.00 0.00 0.00 2.24
170 171 2.159099 TCTGCACTTCGAGTTGTCAAGT 60.159 45.455 0.00 0.00 0.00 3.16
171 172 2.219674 GTCTGCACTTCGAGTTGTCAAG 59.780 50.000 0.00 0.00 0.00 3.02
172 173 2.201732 GTCTGCACTTCGAGTTGTCAA 58.798 47.619 0.00 0.00 0.00 3.18
173 174 1.852942 GTCTGCACTTCGAGTTGTCA 58.147 50.000 0.00 0.00 0.00 3.58
174 175 0.778815 CGTCTGCACTTCGAGTTGTC 59.221 55.000 0.00 0.00 0.00 3.18
175 176 0.384309 TCGTCTGCACTTCGAGTTGT 59.616 50.000 0.00 0.00 0.00 3.32
176 177 1.487482 TTCGTCTGCACTTCGAGTTG 58.513 50.000 3.96 0.00 35.13 3.16
177 178 2.218953 TTTCGTCTGCACTTCGAGTT 57.781 45.000 3.96 0.00 35.13 3.01
178 179 2.218953 TTTTCGTCTGCACTTCGAGT 57.781 45.000 3.96 0.00 35.13 4.18
195 196 1.485895 TGCAAAGGAAGCCTGCTTTTT 59.514 42.857 5.76 1.05 39.98 1.94
196 197 1.069668 CTGCAAAGGAAGCCTGCTTTT 59.930 47.619 5.76 0.00 39.98 2.27
197 198 0.677842 CTGCAAAGGAAGCCTGCTTT 59.322 50.000 5.76 0.00 43.35 3.51
198 199 0.468771 ACTGCAAAGGAAGCCTGCTT 60.469 50.000 3.62 3.62 39.23 3.91
199 200 0.401738 TACTGCAAAGGAAGCCTGCT 59.598 50.000 0.00 0.00 32.13 4.24
200 201 0.807496 CTACTGCAAAGGAAGCCTGC 59.193 55.000 0.00 0.00 32.13 4.85
201 202 2.079925 GTCTACTGCAAAGGAAGCCTG 58.920 52.381 0.00 0.00 32.13 4.85
202 203 1.003696 GGTCTACTGCAAAGGAAGCCT 59.996 52.381 0.00 0.00 33.87 4.58
203 204 1.271379 TGGTCTACTGCAAAGGAAGCC 60.271 52.381 0.00 0.00 0.00 4.35
204 205 2.185004 TGGTCTACTGCAAAGGAAGC 57.815 50.000 0.00 0.00 0.00 3.86
205 206 5.674525 TGATATGGTCTACTGCAAAGGAAG 58.325 41.667 0.00 0.00 0.00 3.46
206 207 5.692115 TGATATGGTCTACTGCAAAGGAA 57.308 39.130 0.00 0.00 0.00 3.36
207 208 5.692115 TTGATATGGTCTACTGCAAAGGA 57.308 39.130 0.00 0.00 0.00 3.36
208 209 6.319658 ACAATTGATATGGTCTACTGCAAAGG 59.680 38.462 13.59 0.00 0.00 3.11
209 210 7.325660 ACAATTGATATGGTCTACTGCAAAG 57.674 36.000 13.59 0.00 0.00 2.77
210 211 6.318648 GGACAATTGATATGGTCTACTGCAAA 59.681 38.462 13.59 0.00 35.40 3.68
211 212 5.822519 GGACAATTGATATGGTCTACTGCAA 59.177 40.000 13.59 0.00 35.40 4.08
212 213 5.368145 GGACAATTGATATGGTCTACTGCA 58.632 41.667 13.59 0.00 35.40 4.41
213 214 4.757149 GGGACAATTGATATGGTCTACTGC 59.243 45.833 13.59 0.00 35.40 4.40
214 215 4.991056 CGGGACAATTGATATGGTCTACTG 59.009 45.833 13.59 0.00 35.40 2.74
215 216 4.899457 TCGGGACAATTGATATGGTCTACT 59.101 41.667 13.59 0.00 35.40 2.57
216 217 4.989168 GTCGGGACAATTGATATGGTCTAC 59.011 45.833 13.59 0.00 35.40 2.59
217 218 4.899457 AGTCGGGACAATTGATATGGTCTA 59.101 41.667 13.59 0.00 35.40 2.59
218 219 3.711704 AGTCGGGACAATTGATATGGTCT 59.288 43.478 13.59 0.00 35.40 3.85
219 220 4.058817 GAGTCGGGACAATTGATATGGTC 58.941 47.826 13.59 0.00 34.45 4.02
220 221 3.711704 AGAGTCGGGACAATTGATATGGT 59.288 43.478 13.59 0.00 0.00 3.55
221 222 4.202253 TGAGAGTCGGGACAATTGATATGG 60.202 45.833 13.59 0.00 0.00 2.74
222 223 4.948847 TGAGAGTCGGGACAATTGATATG 58.051 43.478 13.59 0.00 0.00 1.78
223 224 5.129485 ACTTGAGAGTCGGGACAATTGATAT 59.871 40.000 13.59 0.00 0.00 1.63
224 225 4.466370 ACTTGAGAGTCGGGACAATTGATA 59.534 41.667 13.59 0.00 0.00 2.15
225 226 3.261897 ACTTGAGAGTCGGGACAATTGAT 59.738 43.478 13.59 0.00 0.00 2.57
226 227 2.632996 ACTTGAGAGTCGGGACAATTGA 59.367 45.455 13.59 0.00 0.00 2.57
227 228 3.045601 ACTTGAGAGTCGGGACAATTG 57.954 47.619 3.24 3.24 0.00 2.32
228 229 3.771577 AACTTGAGAGTCGGGACAATT 57.228 42.857 1.17 0.00 34.21 2.32
229 230 3.576982 TGTAACTTGAGAGTCGGGACAAT 59.423 43.478 1.17 0.00 34.21 2.71
230 231 2.960384 TGTAACTTGAGAGTCGGGACAA 59.040 45.455 1.17 0.00 34.21 3.18
231 232 2.557056 CTGTAACTTGAGAGTCGGGACA 59.443 50.000 1.17 0.00 34.21 4.02
232 233 2.818432 TCTGTAACTTGAGAGTCGGGAC 59.182 50.000 0.00 0.00 34.21 4.46
233 234 3.082548 CTCTGTAACTTGAGAGTCGGGA 58.917 50.000 0.00 0.00 34.21 5.14
234 235 2.164624 CCTCTGTAACTTGAGAGTCGGG 59.835 54.545 0.00 0.00 34.94 5.14
235 236 2.164624 CCCTCTGTAACTTGAGAGTCGG 59.835 54.545 0.00 0.00 34.94 4.79
236 237 3.082548 TCCCTCTGTAACTTGAGAGTCG 58.917 50.000 0.00 0.00 34.94 4.18
237 238 3.445805 CCTCCCTCTGTAACTTGAGAGTC 59.554 52.174 0.00 0.00 34.94 3.36
238 239 3.076182 TCCTCCCTCTGTAACTTGAGAGT 59.924 47.826 0.00 0.00 34.94 3.24
239 240 3.699038 CTCCTCCCTCTGTAACTTGAGAG 59.301 52.174 0.00 0.00 36.28 3.20
240 241 3.333980 TCTCCTCCCTCTGTAACTTGAGA 59.666 47.826 0.00 0.00 32.44 3.27
241 242 3.445805 GTCTCCTCCCTCTGTAACTTGAG 59.554 52.174 0.00 0.00 0.00 3.02
242 243 3.432378 GTCTCCTCCCTCTGTAACTTGA 58.568 50.000 0.00 0.00 0.00 3.02
243 244 2.498078 GGTCTCCTCCCTCTGTAACTTG 59.502 54.545 0.00 0.00 0.00 3.16
244 245 2.560158 GGGTCTCCTCCCTCTGTAACTT 60.560 54.545 0.00 0.00 43.85 2.66
245 246 1.007359 GGGTCTCCTCCCTCTGTAACT 59.993 57.143 0.00 0.00 43.85 2.24
246 247 1.487300 GGGTCTCCTCCCTCTGTAAC 58.513 60.000 0.00 0.00 43.85 2.50
255 256 1.003573 AGATGGGTGGGTCTCCTCC 59.996 63.158 0.00 0.00 44.03 4.30
256 257 1.977293 GCAGATGGGTGGGTCTCCTC 61.977 65.000 0.00 0.00 0.00 3.71
257 258 1.997874 GCAGATGGGTGGGTCTCCT 60.998 63.158 0.00 0.00 0.00 3.69
258 259 2.262774 CTGCAGATGGGTGGGTCTCC 62.263 65.000 8.42 0.00 0.00 3.71
259 260 1.222936 CTGCAGATGGGTGGGTCTC 59.777 63.158 8.42 0.00 0.00 3.36
260 261 1.229625 TCTGCAGATGGGTGGGTCT 60.230 57.895 13.74 0.00 0.00 3.85
261 262 1.078143 GTCTGCAGATGGGTGGGTC 60.078 63.158 21.47 0.00 0.00 4.46
262 263 2.959484 CGTCTGCAGATGGGTGGGT 61.959 63.158 25.59 0.00 0.00 4.51
263 264 2.124983 CGTCTGCAGATGGGTGGG 60.125 66.667 25.59 4.24 0.00 4.61
264 265 2.124983 CCGTCTGCAGATGGGTGG 60.125 66.667 37.66 22.21 45.32 4.61
274 275 0.109597 CCTTGATGTTTGCCGTCTGC 60.110 55.000 0.00 0.00 41.77 4.26
275 276 1.466167 CTCCTTGATGTTTGCCGTCTG 59.534 52.381 0.00 0.00 0.00 3.51
276 277 1.611673 CCTCCTTGATGTTTGCCGTCT 60.612 52.381 0.00 0.00 0.00 4.18
277 278 0.804989 CCTCCTTGATGTTTGCCGTC 59.195 55.000 0.00 0.00 0.00 4.79
278 279 1.244019 GCCTCCTTGATGTTTGCCGT 61.244 55.000 0.00 0.00 0.00 5.68
279 280 1.508088 GCCTCCTTGATGTTTGCCG 59.492 57.895 0.00 0.00 0.00 5.69
280 281 0.960364 TCGCCTCCTTGATGTTTGCC 60.960 55.000 0.00 0.00 0.00 4.52
281 282 0.449388 CTCGCCTCCTTGATGTTTGC 59.551 55.000 0.00 0.00 0.00 3.68
282 283 2.099141 TCTCGCCTCCTTGATGTTTG 57.901 50.000 0.00 0.00 0.00 2.93
283 284 2.814336 GTTTCTCGCCTCCTTGATGTTT 59.186 45.455 0.00 0.00 0.00 2.83
284 285 2.224523 TGTTTCTCGCCTCCTTGATGTT 60.225 45.455 0.00 0.00 0.00 2.71
285 286 1.347707 TGTTTCTCGCCTCCTTGATGT 59.652 47.619 0.00 0.00 0.00 3.06
286 287 1.734465 GTGTTTCTCGCCTCCTTGATG 59.266 52.381 0.00 0.00 0.00 3.07
287 288 1.673033 CGTGTTTCTCGCCTCCTTGAT 60.673 52.381 0.00 0.00 0.00 2.57
288 289 0.319555 CGTGTTTCTCGCCTCCTTGA 60.320 55.000 0.00 0.00 0.00 3.02
289 290 1.291877 CCGTGTTTCTCGCCTCCTTG 61.292 60.000 0.00 0.00 0.00 3.61
290 291 1.004918 CCGTGTTTCTCGCCTCCTT 60.005 57.895 0.00 0.00 0.00 3.36
291 292 2.657237 CCGTGTTTCTCGCCTCCT 59.343 61.111 0.00 0.00 0.00 3.69
292 293 3.119096 GCCGTGTTTCTCGCCTCC 61.119 66.667 0.00 0.00 0.00 4.30
293 294 3.479269 CGCCGTGTTTCTCGCCTC 61.479 66.667 0.00 0.00 0.00 4.70
296 297 3.774702 GTCCGCCGTGTTTCTCGC 61.775 66.667 0.00 0.00 0.00 5.03
297 298 3.110178 GGTCCGCCGTGTTTCTCG 61.110 66.667 0.00 0.00 0.00 4.04
315 316 1.374758 CCAGCTTCTGACGGGTGAC 60.375 63.158 9.58 0.00 32.44 3.67
316 317 2.583441 CCCAGCTTCTGACGGGTGA 61.583 63.158 9.58 0.00 32.44 4.02
317 318 2.046892 CCCAGCTTCTGACGGGTG 60.047 66.667 0.00 3.11 32.44 4.61
318 319 3.322466 CCCCAGCTTCTGACGGGT 61.322 66.667 4.00 0.00 36.92 5.28
319 320 2.370445 ATCCCCAGCTTCTGACGGG 61.370 63.158 0.00 0.00 35.28 5.28
320 321 1.153289 CATCCCCAGCTTCTGACGG 60.153 63.158 0.00 0.00 32.44 4.79
321 322 1.817099 GCATCCCCAGCTTCTGACG 60.817 63.158 0.00 0.00 32.44 4.35
322 323 1.452833 GGCATCCCCAGCTTCTGAC 60.453 63.158 0.00 0.00 32.44 3.51
323 324 3.001514 GGCATCCCCAGCTTCTGA 58.998 61.111 0.00 0.00 32.44 3.27
333 334 0.623723 TAGTTTGTCCTGGGCATCCC 59.376 55.000 0.00 0.00 45.71 3.85
334 335 1.559682 TCTAGTTTGTCCTGGGCATCC 59.440 52.381 0.00 0.00 0.00 3.51
335 336 3.055094 TCTTCTAGTTTGTCCTGGGCATC 60.055 47.826 0.00 0.00 0.00 3.91
336 337 2.912956 TCTTCTAGTTTGTCCTGGGCAT 59.087 45.455 0.00 0.00 0.00 4.40
337 338 2.303022 CTCTTCTAGTTTGTCCTGGGCA 59.697 50.000 0.00 0.00 0.00 5.36
338 339 2.355209 CCTCTTCTAGTTTGTCCTGGGC 60.355 54.545 0.00 0.00 0.00 5.36
339 340 2.355209 GCCTCTTCTAGTTTGTCCTGGG 60.355 54.545 0.00 0.00 0.00 4.45
340 341 2.569404 AGCCTCTTCTAGTTTGTCCTGG 59.431 50.000 0.00 0.00 0.00 4.45
341 342 3.259374 TGAGCCTCTTCTAGTTTGTCCTG 59.741 47.826 0.00 0.00 0.00 3.86
342 343 3.511477 TGAGCCTCTTCTAGTTTGTCCT 58.489 45.455 0.00 0.00 0.00 3.85
343 344 3.511934 TCTGAGCCTCTTCTAGTTTGTCC 59.488 47.826 0.00 0.00 0.00 4.02
344 345 4.792521 TCTGAGCCTCTTCTAGTTTGTC 57.207 45.455 0.00 0.00 0.00 3.18
345 346 5.753721 ATTCTGAGCCTCTTCTAGTTTGT 57.246 39.130 0.00 0.00 0.00 2.83
346 347 6.202570 GCATATTCTGAGCCTCTTCTAGTTTG 59.797 42.308 0.00 0.00 0.00 2.93
347 348 6.099557 AGCATATTCTGAGCCTCTTCTAGTTT 59.900 38.462 0.00 0.00 0.00 2.66
348 349 5.602145 AGCATATTCTGAGCCTCTTCTAGTT 59.398 40.000 0.00 0.00 0.00 2.24
349 350 5.010922 CAGCATATTCTGAGCCTCTTCTAGT 59.989 44.000 0.00 0.00 36.19 2.57
350 351 5.472148 CAGCATATTCTGAGCCTCTTCTAG 58.528 45.833 0.00 0.00 36.19 2.43
351 352 4.262377 GCAGCATATTCTGAGCCTCTTCTA 60.262 45.833 6.55 0.00 36.19 2.10
352 353 3.494749 GCAGCATATTCTGAGCCTCTTCT 60.495 47.826 6.55 0.00 36.19 2.85
353 354 2.807392 GCAGCATATTCTGAGCCTCTTC 59.193 50.000 6.55 0.00 36.19 2.87
354 355 2.438763 AGCAGCATATTCTGAGCCTCTT 59.561 45.455 6.55 0.00 36.19 2.85
355 356 2.048601 AGCAGCATATTCTGAGCCTCT 58.951 47.619 6.55 0.00 36.19 3.69
356 357 2.144730 CAGCAGCATATTCTGAGCCTC 58.855 52.381 6.55 0.00 36.19 4.70
357 358 1.814634 GCAGCAGCATATTCTGAGCCT 60.815 52.381 6.55 0.00 41.58 4.58
358 359 0.592148 GCAGCAGCATATTCTGAGCC 59.408 55.000 6.55 0.00 41.58 4.70
359 360 1.264557 CAGCAGCAGCATATTCTGAGC 59.735 52.381 6.55 8.98 45.49 4.26
360 361 1.874231 CCAGCAGCAGCATATTCTGAG 59.126 52.381 6.55 0.00 45.49 3.35
361 362 1.211212 ACCAGCAGCAGCATATTCTGA 59.789 47.619 6.55 0.00 45.49 3.27
362 363 1.333931 CACCAGCAGCAGCATATTCTG 59.666 52.381 3.17 0.00 45.49 3.02
363 364 1.676746 CACCAGCAGCAGCATATTCT 58.323 50.000 3.17 0.00 45.49 2.40
364 365 0.666913 CCACCAGCAGCAGCATATTC 59.333 55.000 3.17 0.00 45.49 1.75
365 366 0.256752 TCCACCAGCAGCAGCATATT 59.743 50.000 3.17 0.00 45.49 1.28
366 367 0.256752 TTCCACCAGCAGCAGCATAT 59.743 50.000 3.17 0.00 45.49 1.78
367 368 0.677731 GTTCCACCAGCAGCAGCATA 60.678 55.000 3.17 0.00 45.49 3.14
368 369 1.975407 GTTCCACCAGCAGCAGCAT 60.975 57.895 3.17 0.00 45.49 3.79
369 370 2.595463 GTTCCACCAGCAGCAGCA 60.595 61.111 3.17 0.00 45.49 4.41
370 371 3.368571 GGTTCCACCAGCAGCAGC 61.369 66.667 0.00 0.00 38.42 5.25
371 372 3.052082 CGGTTCCACCAGCAGCAG 61.052 66.667 0.00 0.00 38.47 4.24
372 373 3.825160 GACGGTTCCACCAGCAGCA 62.825 63.158 0.00 0.00 38.47 4.41
373 374 3.050275 GACGGTTCCACCAGCAGC 61.050 66.667 0.00 0.00 38.47 5.25
374 375 2.358737 GGACGGTTCCACCAGCAG 60.359 66.667 0.00 0.00 42.30 4.24
385 386 3.575351 GAGCAGCGAGTTGGACGGT 62.575 63.158 0.00 0.00 42.02 4.83
417 418 0.889306 AACGTTAAGAGCGAGCTCCT 59.111 50.000 20.15 11.16 43.70 3.69
425 426 3.437049 AGAATGCCAAGAACGTTAAGAGC 59.563 43.478 0.00 3.18 0.00 4.09
426 427 5.613358 AAGAATGCCAAGAACGTTAAGAG 57.387 39.130 0.00 0.00 0.00 2.85
427 428 5.642063 CCTAAGAATGCCAAGAACGTTAAGA 59.358 40.000 0.00 0.00 0.00 2.10
428 429 5.163754 CCCTAAGAATGCCAAGAACGTTAAG 60.164 44.000 0.00 0.00 0.00 1.85
435 436 2.647299 TCCACCCTAAGAATGCCAAGAA 59.353 45.455 0.00 0.00 0.00 2.52
443 444 4.285863 CTCAGTCTCTCCACCCTAAGAAT 58.714 47.826 0.00 0.00 0.00 2.40
450 451 0.177604 CATGCTCAGTCTCTCCACCC 59.822 60.000 0.00 0.00 0.00 4.61
461 462 6.370994 AGTTAGTTCTCAATGTTCATGCTCAG 59.629 38.462 0.00 0.00 0.00 3.35
475 476 8.857098 TCAACTTCTAAGCTTAGTTAGTTCTCA 58.143 33.333 31.28 22.67 36.05 3.27
485 486 5.748152 CAGCTAGCTCAACTTCTAAGCTTAG 59.252 44.000 24.90 24.90 43.67 2.18
492 493 5.656859 TCCATAACAGCTAGCTCAACTTCTA 59.343 40.000 16.15 0.00 0.00 2.10
499 500 6.183361 ACCATAATTCCATAACAGCTAGCTCA 60.183 38.462 16.15 3.19 0.00 4.26
509 510 8.034804 AGCAACAAGAAACCATAATTCCATAAC 58.965 33.333 0.00 0.00 0.00 1.89
510 511 8.133024 AGCAACAAGAAACCATAATTCCATAA 57.867 30.769 0.00 0.00 0.00 1.90
511 512 7.395772 TGAGCAACAAGAAACCATAATTCCATA 59.604 33.333 0.00 0.00 0.00 2.74
512 513 6.211184 TGAGCAACAAGAAACCATAATTCCAT 59.789 34.615 0.00 0.00 0.00 3.41
513 514 5.538053 TGAGCAACAAGAAACCATAATTCCA 59.462 36.000 0.00 0.00 0.00 3.53
514 515 6.024552 TGAGCAACAAGAAACCATAATTCC 57.975 37.500 0.00 0.00 0.00 3.01
552 561 9.528489 TGGAAGCAAAATAGTAGGATTTTAGTT 57.472 29.630 0.00 0.00 36.99 2.24
556 565 8.870116 ACTTTGGAAGCAAAATAGTAGGATTTT 58.130 29.630 0.00 0.00 39.13 1.82
583 592 5.182190 TCGAAATTGTTTGGATCGAATTCCA 59.818 36.000 3.55 3.55 44.08 3.53
719 731 6.471841 TGAGAATGACACGAAAAACATTGTTG 59.528 34.615 2.13 0.00 33.92 3.33
720 732 6.472163 GTGAGAATGACACGAAAAACATTGTT 59.528 34.615 0.00 0.00 33.92 2.83
721 733 5.971202 GTGAGAATGACACGAAAAACATTGT 59.029 36.000 0.00 0.00 33.92 2.71
785 818 7.441157 TGCTTGTATTGTATAATGGTCTAGCAC 59.559 37.037 13.40 0.00 32.91 4.40
786 819 7.441157 GTGCTTGTATTGTATAATGGTCTAGCA 59.559 37.037 13.40 13.40 33.97 3.49
787 820 7.441157 TGTGCTTGTATTGTATAATGGTCTAGC 59.559 37.037 0.00 4.77 0.00 3.42
850 889 2.210341 GACGAGTTCGAGGGTGGGTC 62.210 65.000 8.72 0.00 43.02 4.46
884 923 4.166523 TCTCACGCAATAGAAAAGTCTCG 58.833 43.478 0.00 0.00 35.12 4.04
900 939 4.034510 AAAGTCTTGCAGAGTTTTCTCACG 59.965 41.667 11.08 0.00 43.32 4.35
923 962 3.306780 GGACAAACTAACTAGCCTCTGCA 60.307 47.826 0.00 0.00 41.13 4.41
938 977 2.000447 GTCTATGGCGTCTGGACAAAC 59.000 52.381 1.63 0.00 37.08 2.93
950 989 0.104855 TGCTGGTCGATGTCTATGGC 59.895 55.000 0.00 0.00 0.00 4.40
1038 1081 1.630878 AGGAAGGAGATGAAACGGCTT 59.369 47.619 0.00 0.00 0.00 4.35
1136 1179 0.179187 AACGACGATGCTGACTCTCG 60.179 55.000 0.00 0.00 38.34 4.04
1182 1225 4.080356 AGCTGCAATAACATCCCAGAGTTA 60.080 41.667 1.02 0.00 34.99 2.24
1285 1328 3.485394 TGATGCTAACCTTGTCAAAGCA 58.515 40.909 11.14 11.14 46.30 3.91
1366 1409 1.363744 GCCTTGTCATCCTTCTCACG 58.636 55.000 0.00 0.00 0.00 4.35
1390 1434 0.900182 ACACCATCTGACTCGAGGCA 60.900 55.000 22.21 22.21 0.00 4.75
1409 1453 8.514594 CAACAATAGTTTCTAAGCTTTCCATGA 58.485 33.333 3.20 0.00 35.28 3.07
1411 1455 7.177392 AGCAACAATAGTTTCTAAGCTTTCCAT 59.823 33.333 3.20 0.00 35.28 3.41
1427 1471 6.570672 ATTCTGCCATATGAGCAACAATAG 57.429 37.500 16.39 7.17 40.35 1.73
1429 1473 5.864418 AATTCTGCCATATGAGCAACAAT 57.136 34.783 16.39 14.20 40.35 2.71
1440 1484 4.523943 AGAAGCACAACAAATTCTGCCATA 59.476 37.500 0.00 0.00 30.52 2.74
1520 1564 2.508663 GTCGGCCGAACCTGTAGC 60.509 66.667 32.93 11.35 35.61 3.58
1523 1567 2.047274 CATGTCGGCCGAACCTGT 60.047 61.111 32.93 11.37 35.61 4.00
1583 1627 2.811514 GCATGATCGCCAGGAGGGA 61.812 63.158 0.00 0.00 42.39 4.20
1593 1637 4.505922 GGAAGAACTTCTAGTGCATGATCG 59.494 45.833 13.14 0.00 39.45 3.69
1623 1669 1.896660 CCCAACTCCAACACCACCG 60.897 63.158 0.00 0.00 0.00 4.94
1791 1838 3.067883 AGTCATCGTCATCCACATCAGAG 59.932 47.826 0.00 0.00 0.00 3.35
1876 1923 3.870274 ACCGGGCTAATCTTGTAAGTTC 58.130 45.455 6.32 0.00 0.00 3.01
1922 1969 6.920569 ACTCGTCATAAGACAAAACACTTT 57.079 33.333 0.00 0.00 45.23 2.66
1965 2012 0.824109 CTACACTCCCGAATGCCAGA 59.176 55.000 0.00 0.00 0.00 3.86
2114 2161 0.381801 GTCCAATATGCAACGCCAGG 59.618 55.000 0.00 0.00 0.00 4.45
2181 2228 1.343142 TGTTCTAGAAGCGTGCTTGGA 59.657 47.619 12.53 4.81 36.26 3.53
2210 2257 7.386848 GCAAAGTAAAGTCAGTTATGTCCACTA 59.613 37.037 0.00 0.00 0.00 2.74
2223 2279 3.290948 AGTGGGTGCAAAGTAAAGTCA 57.709 42.857 0.00 0.00 0.00 3.41
2230 2286 1.888512 CATGCTAAGTGGGTGCAAAGT 59.111 47.619 0.00 0.00 40.24 2.66
2296 2352 3.372025 GCTAGAAGTTCCCCCAATGTCAT 60.372 47.826 0.00 0.00 0.00 3.06
2320 2376 3.709653 TCATTGGGTCTAACGCTAGGATT 59.290 43.478 0.00 0.00 31.67 3.01
2340 2396 9.478238 TCCCATGAAATTAGAATGAAATCTTCA 57.522 29.630 0.00 0.00 45.01 3.02
2401 2457 4.697352 GTCCTCAGCATGACTTGTAACAAT 59.303 41.667 0.00 0.00 42.56 2.71
2542 2618 6.278363 GGTACTCCGTATACATGAACACATT 58.722 40.000 0.00 0.00 0.00 2.71
2566 2642 7.787935 GCGATCTGTAATACATTTAGTTCAACG 59.212 37.037 0.00 0.00 0.00 4.10
2567 2643 8.600625 TGCGATCTGTAATACATTTAGTTCAAC 58.399 33.333 0.00 0.00 0.00 3.18
2591 2667 6.219302 ACAAGTTTACTGTACGTTACATGC 57.781 37.500 0.00 0.00 38.15 4.06
2624 2700 8.051535 AGATCATGTGGTGAATAGTTTGATCTT 58.948 33.333 6.33 0.00 43.53 2.40
2637 2713 6.611613 AAAGACTAGAAGATCATGTGGTGA 57.388 37.500 0.00 0.00 42.06 4.02
2673 2749 7.575414 TTTCTTGTAAAGCACCATTACTGAA 57.425 32.000 0.00 0.00 45.70 3.02
2683 2759 8.347035 TGTATGTACCTTTTTCTTGTAAAGCAC 58.653 33.333 0.00 0.00 45.70 4.40
2698 2774 5.871524 GCGATGATGATCATGTATGTACCTT 59.128 40.000 14.30 0.00 37.20 3.50
2707 2783 6.872628 AGTAAAATGCGATGATGATCATGT 57.127 33.333 14.30 0.89 37.20 3.21
2711 2787 9.162793 CAACTTTAGTAAAATGCGATGATGATC 57.837 33.333 0.00 0.00 0.00 2.92
2721 2812 8.726988 TCACTGGTATCAACTTTAGTAAAATGC 58.273 33.333 0.00 0.00 0.00 3.56
2744 2835 3.968096 CACAACACATCACGTTTCATCAC 59.032 43.478 0.00 0.00 0.00 3.06
2753 2844 0.111134 CGACAGCACAACACATCACG 60.111 55.000 0.00 0.00 0.00 4.35
3421 3516 2.770048 AGATCTGGGCCGGGAAGG 60.770 66.667 13.58 0.00 44.97 3.46
3422 3517 2.507944 CAGATCTGGGCCGGGAAG 59.492 66.667 15.38 0.00 0.00 3.46
3423 3518 3.089874 CCAGATCTGGGCCGGGAA 61.090 66.667 31.14 0.00 46.81 3.97
3432 3527 0.685458 CCCAAAAGGGCCCAGATCTG 60.685 60.000 27.56 16.24 34.21 2.90
3433 3528 1.699752 CCCAAAAGGGCCCAGATCT 59.300 57.895 27.56 0.00 34.21 2.75
3434 3529 4.362479 CCCAAAAGGGCCCAGATC 57.638 61.111 27.56 0.00 34.21 2.75
3442 3537 1.188863 CCAGATTGAGCCCAAAAGGG 58.811 55.000 0.00 0.00 35.67 3.95
3443 3538 1.188863 CCCAGATTGAGCCCAAAAGG 58.811 55.000 0.00 0.00 35.67 3.11
3444 3539 1.821136 GACCCAGATTGAGCCCAAAAG 59.179 52.381 0.00 0.00 35.67 2.27
3445 3540 1.428912 AGACCCAGATTGAGCCCAAAA 59.571 47.619 0.00 0.00 35.67 2.44
3446 3541 1.075601 AGACCCAGATTGAGCCCAAA 58.924 50.000 0.00 0.00 35.67 3.28
3447 3542 0.329261 CAGACCCAGATTGAGCCCAA 59.671 55.000 0.00 0.00 36.61 4.12
3448 3543 1.565390 CCAGACCCAGATTGAGCCCA 61.565 60.000 0.00 0.00 0.00 5.36
3449 3544 1.225704 CCAGACCCAGATTGAGCCC 59.774 63.158 0.00 0.00 0.00 5.19
3450 3545 1.225704 CCCAGACCCAGATTGAGCC 59.774 63.158 0.00 0.00 0.00 4.70
3451 3546 1.452833 GCCCAGACCCAGATTGAGC 60.453 63.158 0.00 0.00 0.00 4.26
3452 3547 1.153289 CGCCCAGACCCAGATTGAG 60.153 63.158 0.00 0.00 0.00 3.02
3453 3548 2.669133 CCGCCCAGACCCAGATTGA 61.669 63.158 0.00 0.00 0.00 2.57
3454 3549 2.124570 CCGCCCAGACCCAGATTG 60.125 66.667 0.00 0.00 0.00 2.67
3455 3550 3.411517 CCCGCCCAGACCCAGATT 61.412 66.667 0.00 0.00 0.00 2.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.