Multiple sequence alignment - TraesCS2A01G016400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G016400 chr2A 100.000 5221 0 0 1 5221 7552157 7546937 0.000000e+00 9642.0
1 TraesCS2A01G016400 chr2A 100.000 2313 0 0 5524 7836 7546634 7544322 0.000000e+00 4272.0
2 TraesCS2A01G016400 chr2A 91.837 245 17 1 2530 2771 7549550 7549306 9.740000e-89 339.0
3 TraesCS2A01G016400 chr2A 91.837 245 17 1 2608 2852 7549628 7549387 9.740000e-89 339.0
4 TraesCS2A01G016400 chr2A 90.769 65 5 1 5572 5636 192621420 192621483 1.400000e-12 86.1
5 TraesCS2A01G016400 chr2D 95.233 2622 109 6 2608 5221 8500016 8497403 0.000000e+00 4135.0
6 TraesCS2A01G016400 chr2D 93.448 2793 115 28 1 2771 8502518 8499772 0.000000e+00 4082.0
7 TraesCS2A01G016400 chr2D 92.471 1368 64 17 5524 6857 8497340 8495978 0.000000e+00 1919.0
8 TraesCS2A01G016400 chr2D 88.747 782 61 13 6941 7710 8495837 8495071 0.000000e+00 931.0
9 TraesCS2A01G016400 chr2D 92.073 164 10 1 2530 2690 8499935 8499772 2.200000e-55 228.0
10 TraesCS2A01G016400 chr2D 80.709 254 34 7 4980 5221 103476083 103476333 4.830000e-42 183.0
11 TraesCS2A01G016400 chr2B 94.198 2637 116 20 2608 5221 11291309 11288687 0.000000e+00 3988.0
12 TraesCS2A01G016400 chr2B 92.618 2723 158 19 63 2771 11293758 11291065 0.000000e+00 3875.0
13 TraesCS2A01G016400 chr2B 89.497 1809 129 26 5527 7301 11288312 11286531 0.000000e+00 2231.0
14 TraesCS2A01G016400 chr2B 90.854 164 12 1 2530 2690 11291228 11291065 4.760000e-52 217.0
15 TraesCS2A01G016400 chr2B 90.076 131 13 0 3326 3456 359263246 359263116 3.760000e-38 171.0
16 TraesCS2A01G016400 chr2B 87.500 72 9 0 3661 3732 726010713 726010784 5.040000e-12 84.2
17 TraesCS2A01G016400 chr2B 91.667 48 3 1 4018 4064 622501095 622501142 1.830000e-06 65.8
18 TraesCS2A01G016400 chr2B 97.297 37 1 0 1 37 11293798 11293762 6.560000e-06 63.9
19 TraesCS2A01G016400 chr5B 86.542 2504 240 45 2770 5221 50514914 50512456 0.000000e+00 2667.0
20 TraesCS2A01G016400 chr5B 87.494 2175 172 50 451 2609 50516922 50514832 0.000000e+00 2418.0
21 TraesCS2A01G016400 chr5B 90.673 1501 119 9 1117 2609 130934942 130933455 0.000000e+00 1977.0
22 TraesCS2A01G016400 chr5B 84.709 1236 137 29 5665 6892 50512110 50510919 0.000000e+00 1188.0
23 TraesCS2A01G016400 chr5B 85.754 1088 90 25 4080 5124 130918388 130917323 0.000000e+00 1090.0
24 TraesCS2A01G016400 chr5B 83.827 1113 115 32 5809 6914 130916292 130915238 0.000000e+00 998.0
25 TraesCS2A01G016400 chr5B 90.355 705 61 6 2770 3473 130933537 130932839 0.000000e+00 918.0
26 TraesCS2A01G016400 chr5B 90.036 552 40 8 465 1013 224437019 224436480 0.000000e+00 701.0
27 TraesCS2A01G016400 chr5B 78.404 639 81 21 3474 4085 130931025 130930417 5.780000e-96 363.0
28 TraesCS2A01G016400 chr5B 82.061 262 34 5 4870 5118 454124422 454124683 2.220000e-50 211.0
29 TraesCS2A01G016400 chr5B 92.969 128 8 1 5527 5654 50512397 50512271 1.340000e-42 185.0
30 TraesCS2A01G016400 chr5A 86.188 2505 245 48 2770 5221 37979177 37976721 0.000000e+00 2615.0
31 TraesCS2A01G016400 chr5A 87.242 2132 184 42 486 2607 37981150 37979097 0.000000e+00 2350.0
32 TraesCS2A01G016400 chr5A 91.467 1500 108 8 1117 2609 128440354 128438868 0.000000e+00 2043.0
33 TraesCS2A01G016400 chr5A 84.244 1244 141 31 5665 6892 37976366 37975162 0.000000e+00 1160.0
34 TraesCS2A01G016400 chr5A 84.647 1205 118 36 5720 6914 128431999 128430852 0.000000e+00 1138.0
35 TraesCS2A01G016400 chr5A 86.420 1053 101 22 4181 5200 128433808 128432765 0.000000e+00 1114.0
36 TraesCS2A01G016400 chr5A 85.354 1072 126 14 2770 3820 128438950 128437889 0.000000e+00 1081.0
37 TraesCS2A01G016400 chr5A 83.270 263 29 7 4870 5118 343202990 343203251 2.200000e-55 228.0
38 TraesCS2A01G016400 chr5A 94.203 138 8 0 3948 4085 128436996 128436859 2.220000e-50 211.0
39 TraesCS2A01G016400 chr5A 82.828 198 23 7 7107 7296 128430619 128430425 4.860000e-37 167.0
40 TraesCS2A01G016400 chr5A 89.844 128 12 1 5527 5654 37976660 37976534 6.290000e-36 163.0
41 TraesCS2A01G016400 chr5A 95.062 81 4 0 2608 2688 37979177 37979097 2.300000e-25 128.0
42 TraesCS2A01G016400 chr5A 90.769 65 5 1 5572 5636 343203386 343203449 1.400000e-12 86.1
43 TraesCS2A01G016400 chr5D 88.018 2245 199 38 2771 4986 47862039 47859836 0.000000e+00 2591.0
44 TraesCS2A01G016400 chr5D 87.259 2174 180 44 449 2609 47864047 47861958 0.000000e+00 2390.0
45 TraesCS2A01G016400 chr5D 91.667 1500 105 8 1117 2609 118847615 118846129 0.000000e+00 2060.0
46 TraesCS2A01G016400 chr5D 84.519 1350 134 31 2770 4085 118846211 118844903 0.000000e+00 1266.0
47 TraesCS2A01G016400 chr5D 85.370 1244 128 27 5665 6892 47859266 47858061 0.000000e+00 1240.0
48 TraesCS2A01G016400 chr5D 85.882 1190 98 28 4080 5221 118841891 118840724 0.000000e+00 1203.0
49 TraesCS2A01G016400 chr5D 84.108 1183 124 34 5720 6893 118840300 118839173 0.000000e+00 1085.0
50 TraesCS2A01G016400 chr5D 93.750 128 7 1 5527 5654 47859556 47859430 2.890000e-44 191.0
51 TraesCS2A01G016400 chr5D 85.821 134 13 5 7166 7296 118838869 118838739 3.810000e-28 137.0
52 TraesCS2A01G016400 chr7D 83.369 932 92 23 1686 2608 6012027 6011150 0.000000e+00 804.0
53 TraesCS2A01G016400 chr7D 85.405 740 63 29 1049 1785 6013043 6012346 0.000000e+00 726.0
54 TraesCS2A01G016400 chr7D 82.561 453 47 16 2770 3202 6011230 6010790 3.450000e-98 370.0
55 TraesCS2A01G016400 chr6D 90.909 550 37 6 465 1013 4871938 4871401 0.000000e+00 726.0
56 TraesCS2A01G016400 chr7B 90.036 552 40 8 465 1013 142939821 142939282 0.000000e+00 701.0
57 TraesCS2A01G016400 chr7B 89.674 552 42 8 465 1013 663816227 663815688 0.000000e+00 689.0
58 TraesCS2A01G016400 chr7B 81.864 397 44 10 4748 5118 355910945 355910551 7.640000e-80 309.0
59 TraesCS2A01G016400 chr7B 82.477 331 32 8 4811 5118 305503483 305503810 4.660000e-67 267.0
60 TraesCS2A01G016400 chr4B 90.036 552 40 8 465 1013 156825267 156824728 0.000000e+00 701.0
61 TraesCS2A01G016400 chr4B 82.831 332 52 4 6421 6750 287380910 287380582 7.690000e-75 292.0
62 TraesCS2A01G016400 chr3B 90.036 552 40 8 465 1013 789135480 789134941 0.000000e+00 701.0
63 TraesCS2A01G016400 chr6B 89.674 552 42 8 465 1013 641639719 641639180 0.000000e+00 689.0
64 TraesCS2A01G016400 chr7A 82.570 677 71 24 1049 1723 7497172 7496541 3.200000e-153 553.0
65 TraesCS2A01G016400 chr7A 88.034 234 19 7 2383 2608 7496425 7496193 1.300000e-67 268.0
66 TraesCS2A01G016400 chr7A 93.750 64 3 1 1049 1111 7497597 7497534 2.330000e-15 95.3
67 TraesCS2A01G016400 chr4A 80.541 591 65 24 1049 1634 734103229 734103774 7.320000e-110 409.0
68 TraesCS2A01G016400 chr4A 77.033 209 21 17 1049 1235 734102836 734103039 2.330000e-15 95.3
69 TraesCS2A01G016400 chr1B 83.183 333 51 4 6421 6750 453027409 453027079 4.600000e-77 300.0
70 TraesCS2A01G016400 chr4D 82.824 262 32 5 4870 5118 357308864 357309125 1.020000e-53 222.0
71 TraesCS2A01G016400 chr4D 90.769 65 4 2 5572 5636 357309260 357309322 1.400000e-12 86.1
72 TraesCS2A01G016400 chr3D 81.193 218 27 8 4870 5082 604402491 604402283 6.290000e-36 163.0
73 TraesCS2A01G016400 chr1A 83.333 72 12 0 3661 3732 189268337 189268266 5.070000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G016400 chr2A 7544322 7552157 7835 True 3648.000000 9642 95.918500 1 7836 4 chr2A.!!$R1 7835
1 TraesCS2A01G016400 chr2D 8495071 8502518 7447 True 2259.000000 4135 92.394400 1 7710 5 chr2D.!!$R1 7709
2 TraesCS2A01G016400 chr2B 11286531 11293798 7267 True 2074.980000 3988 92.892800 1 7301 5 chr2B.!!$R2 7300
3 TraesCS2A01G016400 chr5B 50510919 50516922 6003 True 1614.500000 2667 87.928500 451 6892 4 chr5B.!!$R2 6441
4 TraesCS2A01G016400 chr5B 130930417 130934942 4525 True 1086.000000 1977 86.477333 1117 4085 3 chr5B.!!$R4 2968
5 TraesCS2A01G016400 chr5B 130915238 130918388 3150 True 1044.000000 1090 84.790500 4080 6914 2 chr5B.!!$R3 2834
6 TraesCS2A01G016400 chr5B 224436480 224437019 539 True 701.000000 701 90.036000 465 1013 1 chr5B.!!$R1 548
7 TraesCS2A01G016400 chr5A 37975162 37981150 5988 True 1283.200000 2615 88.516000 486 6892 5 chr5A.!!$R1 6406
8 TraesCS2A01G016400 chr5A 128430425 128440354 9929 True 959.000000 2043 87.486500 1117 7296 6 chr5A.!!$R2 6179
9 TraesCS2A01G016400 chr5D 47858061 47864047 5986 True 1603.000000 2591 88.599250 449 6892 4 chr5D.!!$R1 6443
10 TraesCS2A01G016400 chr5D 118838739 118847615 8876 True 1150.200000 2060 86.399400 1117 7296 5 chr5D.!!$R2 6179
11 TraesCS2A01G016400 chr7D 6010790 6013043 2253 True 633.333333 804 83.778333 1049 3202 3 chr7D.!!$R1 2153
12 TraesCS2A01G016400 chr6D 4871401 4871938 537 True 726.000000 726 90.909000 465 1013 1 chr6D.!!$R1 548
13 TraesCS2A01G016400 chr7B 142939282 142939821 539 True 701.000000 701 90.036000 465 1013 1 chr7B.!!$R1 548
14 TraesCS2A01G016400 chr7B 663815688 663816227 539 True 689.000000 689 89.674000 465 1013 1 chr7B.!!$R3 548
15 TraesCS2A01G016400 chr4B 156824728 156825267 539 True 701.000000 701 90.036000 465 1013 1 chr4B.!!$R1 548
16 TraesCS2A01G016400 chr3B 789134941 789135480 539 True 701.000000 701 90.036000 465 1013 1 chr3B.!!$R1 548
17 TraesCS2A01G016400 chr6B 641639180 641639719 539 True 689.000000 689 89.674000 465 1013 1 chr6B.!!$R1 548
18 TraesCS2A01G016400 chr7A 7496193 7497597 1404 True 305.433333 553 88.118000 1049 2608 3 chr7A.!!$R1 1559
19 TraesCS2A01G016400 chr4A 734102836 734103774 938 False 252.150000 409 78.787000 1049 1634 2 chr4A.!!$F1 585

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
345 359 0.103937 GCCTGAGACCTGATCTTCCG 59.896 60.000 0.00 0.0 38.00 4.30 F
383 397 0.314618 TGCTTCTGTACACGCGGTTA 59.685 50.000 12.47 0.0 0.00 2.85 F
1729 2211 0.394352 AACCGCCAATGGACCATCTC 60.394 55.000 7.63 0.0 0.00 2.75 F
2596 3603 0.329261 CAATGAGGCAAGTCCCCAGA 59.671 55.000 0.00 0.0 34.51 3.86 F
2622 3629 0.034089 GTAAACCATCTGGGGCTGCT 60.034 55.000 0.00 0.0 42.91 4.24 F
2795 3803 0.105778 GGTGCTGCTAGTCCATCTCC 59.894 60.000 0.00 0.0 0.00 3.71 F
4351 11254 0.109919 GTAAAAGAGGCAAACGGCGG 60.110 55.000 13.24 0.0 46.16 6.13 F
4716 11625 1.869767 GAGATAATTCGCCAGCACCTG 59.130 52.381 0.00 0.0 0.00 4.00 F
5750 13439 1.073722 CTGACCATGCCACACCACT 59.926 57.895 0.00 0.0 0.00 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2300 3191 0.393808 TTTAGCCCCATTCAGCCGTC 60.394 55.000 0.00 0.0 0.00 4.79 R
2340 3234 1.949525 GGCAGCAACTTCTCTGACAAA 59.050 47.619 0.00 0.0 38.22 2.83 R
2603 3610 0.034089 AGCAGCCCCAGATGGTTTAC 60.034 55.000 0.00 0.0 36.55 2.01 R
4126 10916 0.315251 GGGAAAAGCTTGGCTCACAC 59.685 55.000 0.00 0.0 38.25 3.82 R
4351 11254 2.180432 AAGGAACAGGCGAAGGTAAC 57.820 50.000 0.00 0.0 0.00 2.50 R
4716 11625 1.194781 TCTGCACCTCAACTCCCTCC 61.195 60.000 0.00 0.0 0.00 4.30 R
5200 12164 2.767505 GTTTAGGATATGCCGGACCTG 58.232 52.381 5.05 0.0 43.43 4.00 R
6701 14627 0.625849 GGCATCCTTCCCTGGAGAAA 59.374 55.000 0.00 0.0 39.78 2.52 R
6916 14914 0.036765 TTGTGAGCCGTATGTGGACC 60.037 55.000 0.00 0.0 0.00 4.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
71 72 2.664081 GCCACCAGGGACTCTCAGG 61.664 68.421 0.00 0.00 40.01 3.86
75 76 2.063378 CCAGGGACTCTCAGGCCTC 61.063 68.421 0.00 0.00 45.15 4.70
92 93 2.738964 GCCTCAGGTACCGATTTCAGAC 60.739 54.545 6.18 0.00 0.00 3.51
93 94 2.761208 CCTCAGGTACCGATTTCAGACT 59.239 50.000 6.18 0.00 0.00 3.24
100 101 1.614241 CCGATTTCAGACTCCCCCGT 61.614 60.000 0.00 0.00 0.00 5.28
168 169 3.437741 CGCAAGGTTTCGTTAGGGTTTAT 59.562 43.478 0.00 0.00 0.00 1.40
169 170 4.670735 CGCAAGGTTTCGTTAGGGTTTATG 60.671 45.833 0.00 0.00 0.00 1.90
170 171 4.216902 GCAAGGTTTCGTTAGGGTTTATGT 59.783 41.667 0.00 0.00 0.00 2.29
172 173 6.402875 GCAAGGTTTCGTTAGGGTTTATGTAG 60.403 42.308 0.00 0.00 0.00 2.74
176 177 3.723325 TCGTTAGGGTTTATGTAGGGGT 58.277 45.455 0.00 0.00 0.00 4.95
212 215 1.416401 GCCCGTGGATTTCCTGATCTA 59.584 52.381 0.00 0.00 36.82 1.98
213 216 2.807108 GCCCGTGGATTTCCTGATCTAC 60.807 54.545 0.00 0.00 35.06 2.59
219 222 3.181475 TGGATTTCCTGATCTACGTGCTC 60.181 47.826 0.00 0.00 36.82 4.26
278 292 1.344226 TTGCTCGCGTCGTCTGATTG 61.344 55.000 5.77 0.00 0.00 2.67
293 307 2.212900 GATTGGGCCGTGGTTTGCTC 62.213 60.000 0.00 0.00 0.00 4.26
345 359 0.103937 GCCTGAGACCTGATCTTCCG 59.896 60.000 0.00 0.00 38.00 4.30
363 377 2.571653 TCCGTGGATCTCTTTGTTGGAT 59.428 45.455 0.00 0.00 0.00 3.41
370 384 4.704057 GGATCTCTTTGTTGGATTGCTTCT 59.296 41.667 0.00 0.00 0.00 2.85
381 395 0.320421 ATTGCTTCTGTACACGCGGT 60.320 50.000 12.47 8.38 0.00 5.68
382 396 0.531090 TTGCTTCTGTACACGCGGTT 60.531 50.000 12.47 0.00 0.00 4.44
383 397 0.314618 TGCTTCTGTACACGCGGTTA 59.685 50.000 12.47 0.00 0.00 2.85
384 398 0.989890 GCTTCTGTACACGCGGTTAG 59.010 55.000 12.47 8.00 0.00 2.34
385 399 1.625616 CTTCTGTACACGCGGTTAGG 58.374 55.000 12.47 0.00 0.00 2.69
388 402 2.158559 TCTGTACACGCGGTTAGGTTA 58.841 47.619 12.47 0.00 0.00 2.85
404 423 3.451890 AGGTTAGGTTAGGTTAGCTGCT 58.548 45.455 7.57 7.57 0.00 4.24
477 496 5.029014 CGAGTTAAGTTATCTGACGACCTG 58.971 45.833 0.00 0.00 0.00 4.00
484 503 0.529833 ATCTGACGACCTGAGCTGTG 59.470 55.000 0.00 0.00 0.00 3.66
565 585 4.255126 CAGTTGCATTGCACCTGC 57.745 55.556 21.06 12.45 41.64 4.85
681 703 3.011566 TGCTCTTACTCTCAGCTAGCT 57.988 47.619 12.68 12.68 34.03 3.32
682 704 4.157849 TGCTCTTACTCTCAGCTAGCTA 57.842 45.455 18.86 0.33 34.03 3.32
683 705 4.133820 TGCTCTTACTCTCAGCTAGCTAG 58.866 47.826 18.86 16.84 34.03 3.42
746 769 2.610438 ACCAATTCAGACCTGGCATT 57.390 45.000 0.00 0.00 33.19 3.56
806 831 7.011389 TGTCTTCTGTGTTACTGTTCATTTCTG 59.989 37.037 0.00 0.00 0.00 3.02
820 846 7.453393 TGTTCATTTCTGAATCTGGTCTTAGT 58.547 34.615 0.00 0.00 43.08 2.24
821 847 7.604164 TGTTCATTTCTGAATCTGGTCTTAGTC 59.396 37.037 0.00 0.00 43.08 2.59
822 848 7.487822 TCATTTCTGAATCTGGTCTTAGTCT 57.512 36.000 0.00 0.00 0.00 3.24
823 849 7.551585 TCATTTCTGAATCTGGTCTTAGTCTC 58.448 38.462 0.00 0.00 0.00 3.36
835 861 3.699038 GTCTTAGTCTCTCTCAGGCATGT 59.301 47.826 0.00 0.00 0.00 3.21
840 866 5.083533 AGTCTCTCTCAGGCATGTTTTAG 57.916 43.478 0.00 0.00 0.00 1.85
841 867 4.530161 AGTCTCTCTCAGGCATGTTTTAGT 59.470 41.667 0.00 0.00 0.00 2.24
1266 1737 6.291648 TCTGTATCAAGAAGCAGAGATGTT 57.708 37.500 0.00 0.00 33.62 2.71
1267 1738 6.104665 TCTGTATCAAGAAGCAGAGATGTTG 58.895 40.000 0.00 0.00 33.62 3.33
1332 1804 4.645762 TCAGAGAACTGATGGAAGATCG 57.354 45.455 0.00 0.00 46.55 3.69
1392 1865 1.614903 CAAGAAGCTGCAAACCATGGA 59.385 47.619 21.47 0.00 0.00 3.41
1539 2015 2.369860 TGACCAACTGCAGAAGACATCT 59.630 45.455 23.35 0.00 39.68 2.90
1635 2117 2.276740 CTGTGGGGGATCCTTGGC 59.723 66.667 12.58 0.95 36.20 4.52
1688 2170 3.755378 CCAAACCCTGAAGACATTGAGAG 59.245 47.826 0.00 0.00 0.00 3.20
1729 2211 0.394352 AACCGCCAATGGACCATCTC 60.394 55.000 7.63 0.00 0.00 2.75
1788 2673 8.373981 CCTGATATTATCAAGACACCTGATCTT 58.626 37.037 7.73 0.00 39.11 2.40
1884 2770 2.224548 ACAAGTAGTTGAAGTGAGGCCC 60.225 50.000 17.23 0.00 37.10 5.80
1900 2786 1.290955 CCCGTTACTCGCACCTTGA 59.709 57.895 0.00 0.00 38.35 3.02
1907 2793 2.355837 TCGCACCTTGAGTCGCAC 60.356 61.111 0.00 0.00 0.00 5.34
1958 2844 2.181954 AAGAGCCAGAGTGCAAAGAG 57.818 50.000 0.00 0.00 0.00 2.85
2006 2893 2.033801 CCAAGCAGAAAACACTGGACAG 59.966 50.000 0.00 0.00 38.22 3.51
2044 2931 2.102252 GAGAAATGCACACCCAAAACCA 59.898 45.455 0.00 0.00 0.00 3.67
2208 3098 5.163972 GCTATCTTCTAGAAATGCAGCATCG 60.164 44.000 8.77 0.00 0.00 3.84
2244 3135 3.883489 AGAAAACCACCTCCTTTTCTTCG 59.117 43.478 0.00 0.00 41.77 3.79
2340 3234 2.097825 GTTGGGCTTCAGAAGATGCAT 58.902 47.619 14.86 0.00 44.33 3.96
2507 3430 1.004745 CCCTCAGGCACATAAACCAGT 59.995 52.381 0.00 0.00 0.00 4.00
2577 3584 2.490115 TGAACCGAAAATGTACCCATGC 59.510 45.455 0.00 0.00 0.00 4.06
2578 3585 2.208132 ACCGAAAATGTACCCATGCA 57.792 45.000 0.00 0.00 0.00 3.96
2579 3586 2.520069 ACCGAAAATGTACCCATGCAA 58.480 42.857 0.00 0.00 0.00 4.08
2580 3587 3.096092 ACCGAAAATGTACCCATGCAAT 58.904 40.909 0.00 0.00 0.00 3.56
2581 3588 3.119173 ACCGAAAATGTACCCATGCAATG 60.119 43.478 0.00 0.00 46.21 2.82
2592 3599 4.421365 TGCAATGAGGCAAGTCCC 57.579 55.556 0.00 0.00 41.65 4.46
2593 3600 1.304381 TGCAATGAGGCAAGTCCCC 60.304 57.895 0.00 0.00 41.65 4.81
2594 3601 1.304381 GCAATGAGGCAAGTCCCCA 60.304 57.895 0.00 0.00 34.51 4.96
2595 3602 1.318158 GCAATGAGGCAAGTCCCCAG 61.318 60.000 0.00 0.00 34.51 4.45
2596 3603 0.329261 CAATGAGGCAAGTCCCCAGA 59.671 55.000 0.00 0.00 34.51 3.86
2597 3604 1.064166 CAATGAGGCAAGTCCCCAGAT 60.064 52.381 0.00 0.00 34.51 2.90
2598 3605 2.173356 CAATGAGGCAAGTCCCCAGATA 59.827 50.000 0.00 0.00 34.51 1.98
2599 3606 1.965414 TGAGGCAAGTCCCCAGATAA 58.035 50.000 0.00 0.00 34.51 1.75
2600 3607 2.274542 TGAGGCAAGTCCCCAGATAAA 58.725 47.619 0.00 0.00 34.51 1.40
2601 3608 2.852449 TGAGGCAAGTCCCCAGATAAAT 59.148 45.455 0.00 0.00 34.51 1.40
2602 3609 3.217626 GAGGCAAGTCCCCAGATAAATG 58.782 50.000 0.00 0.00 34.51 2.32
2603 3610 2.091665 AGGCAAGTCCCCAGATAAATGG 60.092 50.000 0.00 0.00 40.29 3.16
2604 3611 2.358195 GGCAAGTCCCCAGATAAATGGT 60.358 50.000 0.00 0.00 38.81 3.55
2605 3612 3.117663 GGCAAGTCCCCAGATAAATGGTA 60.118 47.826 0.00 0.00 38.81 3.25
2606 3613 4.532834 GCAAGTCCCCAGATAAATGGTAA 58.467 43.478 0.00 0.00 38.81 2.85
2607 3614 4.953579 GCAAGTCCCCAGATAAATGGTAAA 59.046 41.667 0.00 0.00 38.81 2.01
2608 3615 5.163550 GCAAGTCCCCAGATAAATGGTAAAC 60.164 44.000 0.00 0.00 38.81 2.01
2609 3616 5.125367 AGTCCCCAGATAAATGGTAAACC 57.875 43.478 0.00 0.00 38.81 3.27
2619 3626 2.799576 TGGTAAACCATCTGGGGCT 58.200 52.632 0.00 0.00 42.01 5.19
2620 3627 0.331278 TGGTAAACCATCTGGGGCTG 59.669 55.000 0.00 0.00 42.01 4.85
2621 3628 1.037579 GGTAAACCATCTGGGGCTGC 61.038 60.000 0.54 0.00 42.91 5.25
2622 3629 0.034089 GTAAACCATCTGGGGCTGCT 60.034 55.000 0.00 0.00 42.91 4.24
2623 3630 1.211949 GTAAACCATCTGGGGCTGCTA 59.788 52.381 0.00 0.00 42.91 3.49
2624 3631 0.257039 AAACCATCTGGGGCTGCTAG 59.743 55.000 0.00 0.00 42.91 3.42
2625 3632 0.916358 AACCATCTGGGGCTGCTAGT 60.916 55.000 0.00 0.00 42.91 2.57
2626 3633 1.341156 ACCATCTGGGGCTGCTAGTC 61.341 60.000 0.00 0.00 42.91 2.59
2627 3634 1.449353 CATCTGGGGCTGCTAGTCC 59.551 63.158 0.00 0.00 39.92 3.85
2628 3635 1.003442 ATCTGGGGCTGCTAGTCCA 59.997 57.895 8.71 2.28 43.30 4.02
2629 3636 0.401105 ATCTGGGGCTGCTAGTCCAT 60.401 55.000 8.71 0.00 43.30 3.41
2630 3637 1.050988 TCTGGGGCTGCTAGTCCATC 61.051 60.000 8.71 0.00 43.30 3.51
2631 3638 1.306911 TGGGGCTGCTAGTCCATCA 60.307 57.895 8.71 0.00 43.30 3.07
2632 3639 1.147153 GGGGCTGCTAGTCCATCAC 59.853 63.158 8.71 0.00 43.30 3.06
2633 3640 1.147153 GGGCTGCTAGTCCATCACC 59.853 63.158 0.00 0.00 40.51 4.02
2634 3641 1.341156 GGGCTGCTAGTCCATCACCT 61.341 60.000 0.00 0.00 40.51 4.00
2635 3642 0.179062 GGCTGCTAGTCCATCACCTG 60.179 60.000 0.00 0.00 0.00 4.00
2636 3643 0.826715 GCTGCTAGTCCATCACCTGA 59.173 55.000 0.00 0.00 0.00 3.86
2637 3644 1.208052 GCTGCTAGTCCATCACCTGAA 59.792 52.381 0.00 0.00 0.00 3.02
2638 3645 2.898705 CTGCTAGTCCATCACCTGAAC 58.101 52.381 0.00 0.00 0.00 3.18
2639 3646 1.555075 TGCTAGTCCATCACCTGAACC 59.445 52.381 0.00 0.00 0.00 3.62
2640 3647 1.555075 GCTAGTCCATCACCTGAACCA 59.445 52.381 0.00 0.00 0.00 3.67
2641 3648 2.027192 GCTAGTCCATCACCTGAACCAA 60.027 50.000 0.00 0.00 0.00 3.67
2642 3649 3.559171 GCTAGTCCATCACCTGAACCAAA 60.559 47.826 0.00 0.00 0.00 3.28
2643 3650 3.593442 AGTCCATCACCTGAACCAAAA 57.407 42.857 0.00 0.00 0.00 2.44
2644 3651 3.909732 AGTCCATCACCTGAACCAAAAA 58.090 40.909 0.00 0.00 0.00 1.94
2645 3652 4.482990 AGTCCATCACCTGAACCAAAAAT 58.517 39.130 0.00 0.00 0.00 1.82
2646 3653 4.281688 AGTCCATCACCTGAACCAAAAATG 59.718 41.667 0.00 0.00 0.00 2.32
2647 3654 4.039124 GTCCATCACCTGAACCAAAAATGT 59.961 41.667 0.00 0.00 0.00 2.71
2648 3655 5.242838 GTCCATCACCTGAACCAAAAATGTA 59.757 40.000 0.00 0.00 0.00 2.29
2649 3656 5.242838 TCCATCACCTGAACCAAAAATGTAC 59.757 40.000 0.00 0.00 0.00 2.90
2650 3657 5.469479 CATCACCTGAACCAAAAATGTACC 58.531 41.667 0.00 0.00 0.00 3.34
2651 3658 3.892588 TCACCTGAACCAAAAATGTACCC 59.107 43.478 0.00 0.00 0.00 3.69
2652 3659 2.888414 ACCTGAACCAAAAATGTACCCG 59.112 45.455 0.00 0.00 0.00 5.28
2653 3660 2.888414 CCTGAACCAAAAATGTACCCGT 59.112 45.455 0.00 0.00 0.00 5.28
2654 3661 3.305064 CCTGAACCAAAAATGTACCCGTG 60.305 47.826 0.00 0.00 0.00 4.94
2685 3693 2.091885 GGCAAGTCCCCAGATAAATGGA 60.092 50.000 0.00 0.00 43.57 3.41
2714 3722 0.539051 GGTGCTGCTAGTCCATCACT 59.461 55.000 0.00 0.00 39.41 3.41
2739 3747 1.471287 GCGAAAAAGTACCCATGGGAC 59.529 52.381 38.07 27.48 38.96 4.46
2755 3763 2.115343 GGACAATGAGACAAGTCCCC 57.885 55.000 12.47 0.00 43.67 4.81
2756 3764 1.351017 GGACAATGAGACAAGTCCCCA 59.649 52.381 12.47 0.00 43.67 4.96
2757 3765 2.616510 GGACAATGAGACAAGTCCCCAG 60.617 54.545 12.47 0.00 43.67 4.45
2758 3766 2.303022 GACAATGAGACAAGTCCCCAGA 59.697 50.000 0.00 0.00 0.00 3.86
2759 3767 2.915604 ACAATGAGACAAGTCCCCAGAT 59.084 45.455 0.00 0.00 0.00 2.90
2760 3768 4.104086 ACAATGAGACAAGTCCCCAGATA 58.896 43.478 0.00 0.00 0.00 1.98
2761 3769 4.536090 ACAATGAGACAAGTCCCCAGATAA 59.464 41.667 0.00 0.00 0.00 1.75
2762 3770 5.014123 ACAATGAGACAAGTCCCCAGATAAA 59.986 40.000 0.00 0.00 0.00 1.40
2763 3771 5.983333 ATGAGACAAGTCCCCAGATAAAT 57.017 39.130 0.00 0.00 0.00 1.40
2764 3772 5.102953 TGAGACAAGTCCCCAGATAAATG 57.897 43.478 0.00 0.00 0.00 2.32
2765 3773 4.080356 TGAGACAAGTCCCCAGATAAATGG 60.080 45.833 0.00 0.00 40.29 3.16
2766 3774 2.952310 GACAAGTCCCCAGATAAATGGC 59.048 50.000 0.00 0.00 39.17 4.40
2767 3775 2.311542 ACAAGTCCCCAGATAAATGGCA 59.688 45.455 0.00 0.00 39.17 4.92
2768 3776 3.245586 ACAAGTCCCCAGATAAATGGCAA 60.246 43.478 0.00 0.00 39.17 4.52
2769 3777 3.756082 AGTCCCCAGATAAATGGCAAA 57.244 42.857 0.00 0.00 39.17 3.68
2770 3778 3.365472 AGTCCCCAGATAAATGGCAAAC 58.635 45.455 0.00 0.00 39.17 2.93
2771 3779 2.430694 GTCCCCAGATAAATGGCAAACC 59.569 50.000 0.00 0.00 39.17 3.27
2788 3796 3.376218 CCATCTGGTGCTGCTAGTC 57.624 57.895 0.00 0.00 0.00 2.59
2789 3797 0.179062 CCATCTGGTGCTGCTAGTCC 60.179 60.000 0.00 0.00 0.00 3.85
2790 3798 0.538584 CATCTGGTGCTGCTAGTCCA 59.461 55.000 0.00 3.97 0.00 4.02
2791 3799 1.140452 CATCTGGTGCTGCTAGTCCAT 59.860 52.381 0.00 0.00 0.00 3.41
2792 3800 0.826715 TCTGGTGCTGCTAGTCCATC 59.173 55.000 0.00 0.00 0.00 3.51
2793 3801 0.829333 CTGGTGCTGCTAGTCCATCT 59.171 55.000 0.00 0.00 0.00 2.90
2794 3802 0.826715 TGGTGCTGCTAGTCCATCTC 59.173 55.000 0.00 0.00 0.00 2.75
2795 3803 0.105778 GGTGCTGCTAGTCCATCTCC 59.894 60.000 0.00 0.00 0.00 3.71
2796 3804 1.118838 GTGCTGCTAGTCCATCTCCT 58.881 55.000 0.00 0.00 0.00 3.69
2797 3805 1.117994 TGCTGCTAGTCCATCTCCTG 58.882 55.000 0.00 0.00 0.00 3.86
2798 3806 1.342374 TGCTGCTAGTCCATCTCCTGA 60.342 52.381 0.00 0.00 0.00 3.86
2799 3807 1.759445 GCTGCTAGTCCATCTCCTGAA 59.241 52.381 0.00 0.00 0.00 3.02
2800 3808 2.224018 GCTGCTAGTCCATCTCCTGAAG 60.224 54.545 0.00 0.00 0.00 3.02
2801 3809 1.759445 TGCTAGTCCATCTCCTGAAGC 59.241 52.381 0.00 0.00 0.00 3.86
2802 3810 1.269517 GCTAGTCCATCTCCTGAAGCG 60.270 57.143 0.00 0.00 0.00 4.68
2803 3811 2.302260 CTAGTCCATCTCCTGAAGCGA 58.698 52.381 0.00 0.00 0.00 4.93
2804 3812 1.561643 AGTCCATCTCCTGAAGCGAA 58.438 50.000 0.00 0.00 0.00 4.70
2805 3813 1.902508 AGTCCATCTCCTGAAGCGAAA 59.097 47.619 0.00 0.00 0.00 3.46
2806 3814 2.303022 AGTCCATCTCCTGAAGCGAAAA 59.697 45.455 0.00 0.00 0.00 2.29
2807 3815 3.074412 GTCCATCTCCTGAAGCGAAAAA 58.926 45.455 0.00 0.00 0.00 1.94
2808 3816 3.126000 GTCCATCTCCTGAAGCGAAAAAG 59.874 47.826 0.00 0.00 0.00 2.27
2809 3817 3.077359 CCATCTCCTGAAGCGAAAAAGT 58.923 45.455 0.00 0.00 0.00 2.66
2810 3818 4.020573 TCCATCTCCTGAAGCGAAAAAGTA 60.021 41.667 0.00 0.00 0.00 2.24
2811 3819 4.093556 CCATCTCCTGAAGCGAAAAAGTAC 59.906 45.833 0.00 0.00 0.00 2.73
2812 3820 3.660865 TCTCCTGAAGCGAAAAAGTACC 58.339 45.455 0.00 0.00 0.00 3.34
2813 3821 2.742589 CTCCTGAAGCGAAAAAGTACCC 59.257 50.000 0.00 0.00 0.00 3.69
2814 3822 2.105134 TCCTGAAGCGAAAAAGTACCCA 59.895 45.455 0.00 0.00 0.00 4.51
2815 3823 3.081804 CCTGAAGCGAAAAAGTACCCAT 58.918 45.455 0.00 0.00 0.00 4.00
2816 3824 3.119849 CCTGAAGCGAAAAAGTACCCATG 60.120 47.826 0.00 0.00 0.00 3.66
2817 3825 2.817258 TGAAGCGAAAAAGTACCCATGG 59.183 45.455 4.14 4.14 0.00 3.66
2818 3826 1.834188 AGCGAAAAAGTACCCATGGG 58.166 50.000 30.23 30.23 42.03 4.00
2819 3827 1.353022 AGCGAAAAAGTACCCATGGGA 59.647 47.619 38.07 18.03 38.96 4.37
2820 3828 1.471287 GCGAAAAAGTACCCATGGGAC 59.529 52.381 38.07 27.48 38.96 4.46
2958 3971 5.588648 TGTAAATGGCTACCACAATAGAAGC 59.411 40.000 0.00 0.00 35.80 3.86
3075 4100 1.906574 TCGGTAGGCTTTCCACATCTT 59.093 47.619 0.00 0.00 33.74 2.40
3129 4156 9.549078 TGTTTTGTCTATACTCATGTAACAACA 57.451 29.630 0.00 0.00 30.96 3.33
3170 4197 4.498241 TGTCACTCATTCATGTACTGCTC 58.502 43.478 0.00 0.00 0.00 4.26
3223 4250 6.708285 TGAGTTACCTAAAAGTGAATCTCCC 58.292 40.000 0.00 0.00 0.00 4.30
3363 4390 8.389603 CAACTTTGCAACTTTCAATACACATTT 58.610 29.630 0.00 0.00 0.00 2.32
3608 6459 1.004161 AGAGCTTCTGCCCTTTTCCTC 59.996 52.381 0.00 0.00 40.80 3.71
3648 6508 3.943381 TCAGAGCATCCAATAGCAAAGTG 59.057 43.478 0.00 0.00 33.66 3.16
3654 6520 6.161381 AGCATCCAATAGCAAAGTGAAAAAG 58.839 36.000 0.00 0.00 0.00 2.27
3680 6547 8.587952 AAAGTTAGGTGTTAATTGTGCATTTC 57.412 30.769 0.00 0.00 0.00 2.17
3732 6611 5.642063 AGTGTACGCTTAAGCACAATTATGT 59.358 36.000 26.29 15.29 42.21 2.29
3752 6632 5.871465 TGTGCTAAACATTTTGCTATCGA 57.129 34.783 11.17 0.00 39.18 3.59
3837 6724 8.896744 TCTATTTCCACAGAATTTTCATAGCAG 58.103 33.333 0.00 0.00 0.00 4.24
3852 6739 8.459911 TTTCATAGCAGTCATTGATCAATCAT 57.540 30.769 18.16 4.50 36.56 2.45
3867 6754 5.101648 TCAATCATTATCAGTGCCAGACA 57.898 39.130 0.00 0.00 0.00 3.41
3881 7559 3.209410 GCCAGACACTCCAATAATCCTG 58.791 50.000 0.00 0.00 0.00 3.86
4023 7702 5.954296 ATAGAAGCAACATGTGGCATATC 57.046 39.130 26.79 19.81 0.00 1.63
4294 11191 3.387962 AGACAGCCCTGATAAATCTCCA 58.612 45.455 1.69 0.00 0.00 3.86
4295 11192 3.782523 AGACAGCCCTGATAAATCTCCAA 59.217 43.478 1.69 0.00 0.00 3.53
4305 11202 7.340232 CCCTGATAAATCTCCAACAGAAAATCA 59.660 37.037 0.00 0.00 33.62 2.57
4311 11208 8.884124 AAATCTCCAACAGAAAATCAGGATAA 57.116 30.769 0.00 0.00 33.62 1.75
4351 11254 0.109919 GTAAAAGAGGCAAACGGCGG 60.110 55.000 13.24 0.00 46.16 6.13
4395 11298 4.892934 TGCCACTTCTGGTAAAGTTGATTT 59.107 37.500 0.00 0.00 40.17 2.17
4420 11324 5.625311 CCTTCTTGCGTTGATTTAACAGTTC 59.375 40.000 0.00 0.00 39.30 3.01
4474 11381 7.496529 TCTTTCAGGAACACAAGAAACTATG 57.503 36.000 0.00 0.00 0.00 2.23
4516 11423 2.569059 CAATGCCCAGATGACTACCTG 58.431 52.381 0.00 0.00 0.00 4.00
4716 11625 1.869767 GAGATAATTCGCCAGCACCTG 59.130 52.381 0.00 0.00 0.00 4.00
4888 11800 3.745975 CGCATTCAACTGTACTTTCAGGA 59.254 43.478 0.00 0.00 39.48 3.86
5024 11949 4.927049 ACAATGAGACCCATTTGTCAGAT 58.073 39.130 0.00 0.00 42.55 2.90
5088 12016 4.022416 GTGTTTTGATCCATTGTGCCACTA 60.022 41.667 0.00 0.00 0.00 2.74
5176 12138 8.934697 AGTCATATAGGCAAATAAGGTTAGACA 58.065 33.333 0.00 0.00 0.00 3.41
5200 12164 5.068198 ACATGATTGGATTCCTGTGTTATGC 59.932 40.000 0.00 0.00 0.00 3.14
5654 12698 5.012239 TCTTTGAATCTGCCTGCAGTTATT 58.988 37.500 17.96 11.56 43.96 1.40
5655 12699 6.179756 TCTTTGAATCTGCCTGCAGTTATTA 58.820 36.000 17.96 0.00 43.96 0.98
5656 12700 6.830324 TCTTTGAATCTGCCTGCAGTTATTAT 59.170 34.615 17.96 2.07 43.96 1.28
5657 12701 7.340232 TCTTTGAATCTGCCTGCAGTTATTATT 59.660 33.333 17.96 10.24 43.96 1.40
5697 13034 7.934665 TGCTCTTTGGACTTTTTACTGTGTATA 59.065 33.333 0.00 0.00 0.00 1.47
5698 13035 8.947115 GCTCTTTGGACTTTTTACTGTGTATAT 58.053 33.333 0.00 0.00 0.00 0.86
5750 13439 1.073722 CTGACCATGCCACACCACT 59.926 57.895 0.00 0.00 0.00 4.00
5818 13685 1.610522 GCACACTTGTGGCAAGATTCT 59.389 47.619 14.81 0.00 45.72 2.40
5819 13686 2.606308 GCACACTTGTGGCAAGATTCTG 60.606 50.000 14.81 5.93 45.72 3.02
5954 13822 3.128349 GAGCAACAAGAACAGTTACGGA 58.872 45.455 0.00 0.00 0.00 4.69
6223 14095 6.518369 CGGAGCCTTATGAAGTATCACCATTA 60.518 42.308 0.00 0.00 38.69 1.90
6269 14143 9.777297 TGCAAGCTTTATGTCATATAACTGATA 57.223 29.630 0.00 0.00 0.00 2.15
6281 14155 9.658799 GTCATATAACTGATACAGGCACATAAT 57.341 33.333 0.00 0.00 35.51 1.28
6305 14184 3.927854 TCCAACATTGTTTCATGCATGG 58.072 40.909 25.97 10.76 32.54 3.66
6337 14216 4.670621 GCTGAATAATGTGGTTAAATCGCG 59.329 41.667 0.00 0.00 0.00 5.87
6374 14256 6.363167 TGAAAAGAATGATTGCCCAATCTT 57.637 33.333 18.63 11.61 45.55 2.40
6400 14282 8.623903 TCATTGGCACATGATTAGAAGAAATAC 58.376 33.333 0.00 0.00 39.30 1.89
6466 14386 8.375506 AGTTCACTGTTATCATTGTTAAGAGGA 58.624 33.333 13.28 7.27 0.00 3.71
6470 14390 9.612620 CACTGTTATCATTGTTAAGAGGAAAAC 57.387 33.333 13.28 0.00 0.00 2.43
6488 14408 6.017934 AGGAAAACGGAATGAATCATCATACG 60.018 38.462 0.00 0.00 45.60 3.06
6668 14594 3.066342 AGCTCAATGATGCCGAAATCAAG 59.934 43.478 4.41 0.35 39.90 3.02
6683 14609 2.448926 TCAAGATCGCGAAGGTTCAA 57.551 45.000 15.24 0.00 0.00 2.69
6701 14627 3.637769 TCAAAAGGTAAGGCAAACACCT 58.362 40.909 0.00 0.00 44.66 4.00
6713 14641 2.944129 CAAACACCTTTCTCCAGGGAA 58.056 47.619 0.00 0.00 38.42 3.97
6732 14665 1.592669 GGATGCCGTGTCGATCAGG 60.593 63.158 0.00 0.00 0.00 3.86
6741 14674 1.557099 TGTCGATCAGGCACTAACCT 58.443 50.000 0.00 0.00 42.30 3.50
6750 14683 2.296190 CAGGCACTAACCTTTTTCCCAC 59.704 50.000 0.00 0.00 38.26 4.61
6772 14705 0.326264 AAATGGTTCCGCAGAGAGCT 59.674 50.000 0.00 0.00 42.61 4.09
6777 14710 2.826287 TCCGCAGAGAGCTCGGAG 60.826 66.667 8.37 0.00 46.12 4.63
6780 14713 2.833533 CGCAGAGAGCTCGGAGGAG 61.834 68.421 8.37 0.00 42.61 3.69
6790 14723 1.709578 CTCGGAGGAGGATGAATGGA 58.290 55.000 0.00 0.00 36.61 3.41
6791 14724 2.255406 CTCGGAGGAGGATGAATGGAT 58.745 52.381 0.00 0.00 36.61 3.41
6875 14873 7.980032 TCTACAGGACAGAAGTAGATAGCTAT 58.020 38.462 5.76 5.76 39.28 2.97
6914 14912 0.385974 GGCATCACGTCACAAACAGC 60.386 55.000 0.00 0.00 0.00 4.40
6915 14913 0.307453 GCATCACGTCACAAACAGCA 59.693 50.000 0.00 0.00 0.00 4.41
6916 14914 1.661178 GCATCACGTCACAAACAGCAG 60.661 52.381 0.00 0.00 0.00 4.24
6917 14915 1.069703 CATCACGTCACAAACAGCAGG 60.070 52.381 0.00 0.00 0.00 4.85
6918 14916 0.107897 TCACGTCACAAACAGCAGGT 60.108 50.000 0.00 0.00 0.00 4.00
6920 14918 0.814010 ACGTCACAAACAGCAGGTCC 60.814 55.000 0.00 0.00 0.00 4.46
6921 14919 0.813610 CGTCACAAACAGCAGGTCCA 60.814 55.000 0.00 0.00 0.00 4.02
6923 14921 0.254462 TCACAAACAGCAGGTCCACA 59.746 50.000 0.00 0.00 0.00 4.17
6924 14922 1.133823 TCACAAACAGCAGGTCCACAT 60.134 47.619 0.00 0.00 0.00 3.21
6925 14923 2.105649 TCACAAACAGCAGGTCCACATA 59.894 45.455 0.00 0.00 0.00 2.29
6926 14924 2.226437 CACAAACAGCAGGTCCACATAC 59.774 50.000 0.00 0.00 0.00 2.39
6927 14925 1.464608 CAAACAGCAGGTCCACATACG 59.535 52.381 0.00 0.00 0.00 3.06
6928 14926 0.036388 AACAGCAGGTCCACATACGG 60.036 55.000 0.00 0.00 0.00 4.02
6929 14927 1.815421 CAGCAGGTCCACATACGGC 60.815 63.158 0.00 0.00 0.00 5.68
6931 14929 1.521681 GCAGGTCCACATACGGCTC 60.522 63.158 0.00 0.00 0.00 4.70
6932 14930 1.897423 CAGGTCCACATACGGCTCA 59.103 57.895 0.00 0.00 0.00 4.26
6933 14931 0.460284 CAGGTCCACATACGGCTCAC 60.460 60.000 0.00 0.00 0.00 3.51
6936 14934 1.609580 GGTCCACATACGGCTCACAAA 60.610 52.381 0.00 0.00 0.00 2.83
6939 14937 1.086696 CACATACGGCTCACAAAGGG 58.913 55.000 0.00 0.00 0.00 3.95
6946 14987 0.315251 GGCTCACAAAGGGTTTGCTC 59.685 55.000 0.00 0.00 44.39 4.26
6954 14995 3.260632 ACAAAGGGTTTGCTCACAGTTTT 59.739 39.130 0.00 0.00 44.39 2.43
6993 15034 2.703007 CCAAAGCAGTAGGAGGCTATCT 59.297 50.000 0.00 0.00 40.01 1.98
7076 15150 1.608590 ACCATGCCGTGTTTCTTTCAG 59.391 47.619 0.00 0.00 0.00 3.02
7116 15190 6.773976 ATTGTTTCTTGTTTCCAGACTGAA 57.226 33.333 3.32 0.00 0.00 3.02
7120 15194 7.703328 TGTTTCTTGTTTCCAGACTGAATAAC 58.297 34.615 3.32 5.79 0.00 1.89
7185 15263 1.002544 TGCCATGTGAACGTGATGGTA 59.997 47.619 14.30 9.34 39.17 3.25
7229 15307 7.884877 TCTGGTGACATATTTGATGTCTTTCTT 59.115 33.333 16.35 0.00 46.25 2.52
7233 15311 8.180267 GTGACATATTTGATGTCTTTCTTCCAG 58.820 37.037 16.35 0.00 46.25 3.86
7296 15376 9.507329 GATGAGGAAATTAGAGGCAAATGTATA 57.493 33.333 0.00 0.00 0.00 1.47
7301 15381 8.515414 GGAAATTAGAGGCAAATGTATATGTCC 58.485 37.037 0.00 0.00 0.00 4.02
7302 15382 9.289782 GAAATTAGAGGCAAATGTATATGTCCT 57.710 33.333 0.00 0.00 0.00 3.85
7303 15383 9.646522 AAATTAGAGGCAAATGTATATGTCCTT 57.353 29.630 0.00 0.00 0.00 3.36
7309 15389 6.549736 AGGCAAATGTATATGTCCTTTTACCC 59.450 38.462 0.00 0.00 0.00 3.69
7313 15393 7.562454 AATGTATATGTCCTTTTACCCGTTG 57.438 36.000 0.00 0.00 0.00 4.10
7320 15400 5.374921 TGTCCTTTTACCCGTTGTTATTCA 58.625 37.500 0.00 0.00 0.00 2.57
7325 15405 6.394025 TTTTACCCGTTGTTATTCAAGCTT 57.606 33.333 0.00 0.00 36.66 3.74
7328 15408 5.366829 ACCCGTTGTTATTCAAGCTTTAC 57.633 39.130 0.00 0.00 36.66 2.01
7330 15410 4.399978 CCGTTGTTATTCAAGCTTTACGG 58.600 43.478 0.00 0.00 36.88 4.02
7333 15413 5.333492 CGTTGTTATTCAAGCTTTACGGACA 60.333 40.000 0.00 0.00 36.66 4.02
7359 15439 2.073056 TGTGGCGTAGTACATGCAAAG 58.927 47.619 0.38 0.00 41.30 2.77
7361 15441 1.276705 TGGCGTAGTACATGCAAAGGA 59.723 47.619 0.38 0.00 41.30 3.36
7371 15451 3.094572 ACATGCAAAGGAAAGCTGCTAT 58.905 40.909 0.90 0.00 37.00 2.97
7375 15455 1.820519 CAAAGGAAAGCTGCTATGCCA 59.179 47.619 0.90 0.00 0.00 4.92
7377 15457 1.467920 AGGAAAGCTGCTATGCCAAC 58.532 50.000 0.90 0.00 0.00 3.77
7390 15470 5.236263 TGCTATGCCAACGATAAAGTATGTG 59.764 40.000 0.00 0.00 0.00 3.21
7449 15529 5.293814 CAGATAACAGAACTGCAATGAGAGG 59.706 44.000 1.46 0.00 0.00 3.69
7453 15533 3.817647 ACAGAACTGCAATGAGAGGTTTC 59.182 43.478 1.46 0.00 0.00 2.78
7456 15536 3.515602 ACTGCAATGAGAGGTTTCCTT 57.484 42.857 0.00 0.00 31.76 3.36
7457 15537 3.416156 ACTGCAATGAGAGGTTTCCTTC 58.584 45.455 0.00 0.00 31.76 3.46
7458 15538 3.073650 ACTGCAATGAGAGGTTTCCTTCT 59.926 43.478 0.00 0.00 31.76 2.85
7461 15541 4.279169 TGCAATGAGAGGTTTCCTTCTTTG 59.721 41.667 14.36 14.36 31.76 2.77
7465 15545 7.470009 GCAATGAGAGGTTTCCTTCTTTGTTTA 60.470 37.037 16.89 0.00 33.70 2.01
7485 15565 7.901029 TGTTTATTTGGAATAGTTTGGATGCA 58.099 30.769 0.00 0.00 0.00 3.96
7493 15573 5.009410 GGAATAGTTTGGATGCAATGAGAGG 59.991 44.000 0.00 0.00 0.00 3.69
7504 15584 3.142174 GCAATGAGAGGTATTGGTAGGC 58.858 50.000 0.00 0.00 36.33 3.93
7509 15589 2.706190 GAGAGGTATTGGTAGGCATGGT 59.294 50.000 0.00 0.00 0.00 3.55
7526 15606 3.114668 TGGTACACGTTATGCTGTGTT 57.885 42.857 3.12 0.00 46.61 3.32
7527 15607 3.061322 TGGTACACGTTATGCTGTGTTC 58.939 45.455 3.12 0.00 46.61 3.18
7531 15611 3.932822 ACACGTTATGCTGTGTTCCATA 58.067 40.909 0.00 0.00 46.61 2.74
7566 15646 3.243501 GCTTGCAGGAAACAGAAATCACA 60.244 43.478 0.00 0.00 0.00 3.58
7578 15658 4.111916 CAGAAATCACAAAAACTTGCCGT 58.888 39.130 0.00 0.00 0.00 5.68
7602 15682 3.833070 AGACACGGGTTGATAGAGAAACT 59.167 43.478 0.00 0.00 0.00 2.66
7620 15700 1.135141 ACTGTCTCTCGCAGCATTCTC 60.135 52.381 0.00 0.00 37.47 2.87
7629 15709 1.975363 GCAGCATTCTCACCGAGCAC 61.975 60.000 0.00 0.00 0.00 4.40
7665 15754 3.119029 GCATTGGCAAGGAACATGTATGT 60.119 43.478 17.10 0.00 40.76 2.29
7666 15755 4.097741 GCATTGGCAAGGAACATGTATGTA 59.902 41.667 17.10 0.00 39.09 2.29
7683 15772 3.746045 TGTACTTCAAGAGTGGACACC 57.254 47.619 0.00 0.00 39.48 4.16
7697 15786 2.092323 GGACACCCCATGCTAAAAGAC 58.908 52.381 0.00 0.00 34.14 3.01
7699 15788 3.054655 GGACACCCCATGCTAAAAGACTA 60.055 47.826 0.00 0.00 34.14 2.59
7727 15816 9.520515 AAAAACAGTGGACATACATTTATCTCT 57.479 29.630 0.00 0.00 0.00 3.10
7728 15817 8.498054 AAACAGTGGACATACATTTATCTCTG 57.502 34.615 0.00 0.00 0.00 3.35
7729 15818 7.423844 ACAGTGGACATACATTTATCTCTGA 57.576 36.000 0.00 0.00 0.00 3.27
7730 15819 7.851228 ACAGTGGACATACATTTATCTCTGAA 58.149 34.615 0.00 0.00 0.00 3.02
7731 15820 8.321353 ACAGTGGACATACATTTATCTCTGAAA 58.679 33.333 0.00 0.00 0.00 2.69
7732 15821 9.334947 CAGTGGACATACATTTATCTCTGAAAT 57.665 33.333 0.00 0.00 0.00 2.17
7733 15822 9.334947 AGTGGACATACATTTATCTCTGAAATG 57.665 33.333 6.56 6.56 45.67 2.32
7734 15823 9.330063 GTGGACATACATTTATCTCTGAAATGA 57.670 33.333 13.48 0.69 43.85 2.57
7735 15824 9.551734 TGGACATACATTTATCTCTGAAATGAG 57.448 33.333 13.48 6.71 43.85 2.90
7736 15825 9.770097 GGACATACATTTATCTCTGAAATGAGA 57.230 33.333 13.48 0.00 43.85 3.27
7763 15852 4.776795 TTTTTCTTGCGGGATAAACCTC 57.223 40.909 0.00 0.00 38.98 3.85
7764 15853 2.413310 TTCTTGCGGGATAAACCTCC 57.587 50.000 0.00 0.00 38.98 4.30
7765 15854 1.281419 TCTTGCGGGATAAACCTCCA 58.719 50.000 0.00 0.00 37.01 3.86
7766 15855 1.631388 TCTTGCGGGATAAACCTCCAA 59.369 47.619 0.00 0.00 37.01 3.53
7767 15856 2.241176 TCTTGCGGGATAAACCTCCAAT 59.759 45.455 0.00 0.00 37.01 3.16
7768 15857 2.818751 TGCGGGATAAACCTCCAATT 57.181 45.000 0.00 0.00 37.01 2.32
7769 15858 3.094484 TGCGGGATAAACCTCCAATTT 57.906 42.857 0.00 0.00 37.01 1.82
7770 15859 4.237976 TGCGGGATAAACCTCCAATTTA 57.762 40.909 0.00 0.00 37.01 1.40
7771 15860 4.798882 TGCGGGATAAACCTCCAATTTAT 58.201 39.130 0.00 0.00 37.01 1.40
7772 15861 5.205056 TGCGGGATAAACCTCCAATTTATT 58.795 37.500 0.00 0.00 37.01 1.40
7773 15862 5.300792 TGCGGGATAAACCTCCAATTTATTC 59.699 40.000 0.00 0.00 37.01 1.75
7774 15863 5.300792 GCGGGATAAACCTCCAATTTATTCA 59.699 40.000 0.00 0.00 37.01 2.57
7775 15864 6.015434 GCGGGATAAACCTCCAATTTATTCAT 60.015 38.462 0.00 0.00 37.01 2.57
7776 15865 7.593825 CGGGATAAACCTCCAATTTATTCATC 58.406 38.462 0.00 0.00 37.01 2.92
7777 15866 7.230510 CGGGATAAACCTCCAATTTATTCATCA 59.769 37.037 0.00 0.00 37.01 3.07
7778 15867 9.093458 GGGATAAACCTCCAATTTATTCATCAT 57.907 33.333 0.00 0.00 37.01 2.45
7782 15871 8.599624 AAACCTCCAATTTATTCATCATCTGT 57.400 30.769 0.00 0.00 0.00 3.41
7783 15872 7.814264 ACCTCCAATTTATTCATCATCTGTC 57.186 36.000 0.00 0.00 0.00 3.51
7784 15873 6.484643 ACCTCCAATTTATTCATCATCTGTCG 59.515 38.462 0.00 0.00 0.00 4.35
7785 15874 6.484643 CCTCCAATTTATTCATCATCTGTCGT 59.515 38.462 0.00 0.00 0.00 4.34
7786 15875 7.250445 TCCAATTTATTCATCATCTGTCGTG 57.750 36.000 0.00 0.00 0.00 4.35
7787 15876 6.260714 TCCAATTTATTCATCATCTGTCGTGG 59.739 38.462 0.00 0.00 0.00 4.94
7788 15877 6.260714 CCAATTTATTCATCATCTGTCGTGGA 59.739 38.462 0.00 0.00 0.00 4.02
7789 15878 7.040892 CCAATTTATTCATCATCTGTCGTGGAT 60.041 37.037 0.00 0.00 0.00 3.41
7790 15879 6.849588 TTTATTCATCATCTGTCGTGGATG 57.150 37.500 0.00 0.00 41.14 3.51
7791 15880 3.893326 TTCATCATCTGTCGTGGATGT 57.107 42.857 12.04 2.09 40.76 3.06
7792 15881 3.443099 TCATCATCTGTCGTGGATGTC 57.557 47.619 12.04 0.00 40.76 3.06
7793 15882 2.101415 TCATCATCTGTCGTGGATGTCC 59.899 50.000 12.04 0.00 40.76 4.02
7794 15883 0.455815 TCATCTGTCGTGGATGTCCG 59.544 55.000 12.04 0.00 40.76 4.79
7795 15884 0.528466 CATCTGTCGTGGATGTCCGG 60.528 60.000 0.00 0.00 39.43 5.14
7796 15885 0.683179 ATCTGTCGTGGATGTCCGGA 60.683 55.000 0.00 0.00 39.43 5.14
7797 15886 1.139734 CTGTCGTGGATGTCCGGAG 59.860 63.158 3.06 0.00 39.43 4.63
7798 15887 1.303806 TGTCGTGGATGTCCGGAGA 60.304 57.895 3.06 2.85 39.43 3.71
7799 15888 0.896479 TGTCGTGGATGTCCGGAGAA 60.896 55.000 3.06 0.00 39.43 2.87
7800 15889 0.458025 GTCGTGGATGTCCGGAGAAC 60.458 60.000 3.06 0.97 39.43 3.01
7801 15890 0.896479 TCGTGGATGTCCGGAGAACA 60.896 55.000 3.06 4.57 39.43 3.18
7802 15891 0.736325 CGTGGATGTCCGGAGAACAC 60.736 60.000 22.26 22.26 39.43 3.32
7803 15892 0.391263 GTGGATGTCCGGAGAACACC 60.391 60.000 21.84 17.65 39.43 4.16
7804 15893 0.834261 TGGATGTCCGGAGAACACCA 60.834 55.000 17.13 17.13 39.43 4.17
7805 15894 0.108138 GGATGTCCGGAGAACACCAG 60.108 60.000 3.06 0.00 0.00 4.00
7806 15895 0.895530 GATGTCCGGAGAACACCAGA 59.104 55.000 3.06 0.00 0.00 3.86
7807 15896 1.275291 GATGTCCGGAGAACACCAGAA 59.725 52.381 3.06 0.00 0.00 3.02
7808 15897 0.679505 TGTCCGGAGAACACCAGAAG 59.320 55.000 3.06 0.00 0.00 2.85
7809 15898 0.680061 GTCCGGAGAACACCAGAAGT 59.320 55.000 3.06 0.00 0.00 3.01
7810 15899 1.891150 GTCCGGAGAACACCAGAAGTA 59.109 52.381 3.06 0.00 0.00 2.24
7811 15900 2.298163 GTCCGGAGAACACCAGAAGTAA 59.702 50.000 3.06 0.00 0.00 2.24
7812 15901 2.298163 TCCGGAGAACACCAGAAGTAAC 59.702 50.000 0.00 0.00 0.00 2.50
7813 15902 2.036733 CCGGAGAACACCAGAAGTAACA 59.963 50.000 0.00 0.00 0.00 2.41
7814 15903 3.493699 CCGGAGAACACCAGAAGTAACAA 60.494 47.826 0.00 0.00 0.00 2.83
7815 15904 4.124238 CGGAGAACACCAGAAGTAACAAA 58.876 43.478 0.00 0.00 0.00 2.83
7816 15905 4.573201 CGGAGAACACCAGAAGTAACAAAA 59.427 41.667 0.00 0.00 0.00 2.44
7817 15906 5.065474 CGGAGAACACCAGAAGTAACAAAAA 59.935 40.000 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 4.736896 GTCCCTGGTGGCGACGTC 62.737 72.222 5.18 5.18 0.00 4.34
56 57 2.284995 GGCCTGAGAGTCCCTGGT 60.285 66.667 0.00 0.00 0.00 4.00
71 72 1.480954 TCTGAAATCGGTACCTGAGGC 59.519 52.381 10.90 3.92 0.00 4.70
75 76 2.159085 GGGAGTCTGAAATCGGTACCTG 60.159 54.545 10.90 3.80 0.00 4.00
100 101 2.444696 CCAACCCAATCCAGCCCA 59.555 61.111 0.00 0.00 0.00 5.36
168 169 1.279025 GCCTGATCCCAACCCCTACA 61.279 60.000 0.00 0.00 0.00 2.74
169 170 1.532238 GCCTGATCCCAACCCCTAC 59.468 63.158 0.00 0.00 0.00 3.18
170 171 2.070039 CGCCTGATCCCAACCCCTA 61.070 63.158 0.00 0.00 0.00 3.53
190 191 3.508840 CAGGAAATCCACGGGCGC 61.509 66.667 0.00 0.00 38.89 6.53
212 215 4.831307 GACGCGATCGGAGCACGT 62.831 66.667 15.93 16.88 44.69 4.49
293 307 0.796312 CGACCAACTGAATGGAACCG 59.204 55.000 10.41 7.32 43.54 4.44
326 340 0.103937 CGGAAGATCAGGTCTCAGGC 59.896 60.000 0.00 0.00 35.67 4.85
345 359 3.760684 AGCAATCCAACAAAGAGATCCAC 59.239 43.478 0.00 0.00 0.00 4.02
363 377 0.531090 AACCGCGTGTACAGAAGCAA 60.531 50.000 4.92 0.00 0.00 3.91
370 384 1.202114 CCTAACCTAACCGCGTGTACA 59.798 52.381 4.92 0.00 0.00 2.90
381 395 5.028131 AGCAGCTAACCTAACCTAACCTAA 58.972 41.667 0.00 0.00 0.00 2.69
382 396 4.404715 CAGCAGCTAACCTAACCTAACCTA 59.595 45.833 0.00 0.00 0.00 3.08
383 397 3.197983 CAGCAGCTAACCTAACCTAACCT 59.802 47.826 0.00 0.00 0.00 3.50
384 398 3.532542 CAGCAGCTAACCTAACCTAACC 58.467 50.000 0.00 0.00 0.00 2.85
385 399 2.937149 GCAGCAGCTAACCTAACCTAAC 59.063 50.000 0.00 0.00 37.91 2.34
388 402 0.984230 TGCAGCAGCTAACCTAACCT 59.016 50.000 1.76 0.00 42.74 3.50
477 496 2.095567 CCACAAGCAATACACACAGCTC 60.096 50.000 0.00 0.00 36.07 4.09
484 503 3.146066 TGGTCTTCCACAAGCAATACAC 58.854 45.455 0.00 0.00 39.03 2.90
644 666 3.972638 AGAGCATACCAACCAGATCAGAT 59.027 43.478 0.00 0.00 0.00 2.90
716 738 6.093219 CAGGTCTGAATTGGTATATATGCAGC 59.907 42.308 3.10 0.00 0.00 5.25
728 750 3.624777 ACTAATGCCAGGTCTGAATTGG 58.375 45.455 0.00 4.73 35.06 3.16
774 797 8.201464 TGAACAGTAACACAGAAGACAGAATTA 58.799 33.333 0.00 0.00 0.00 1.40
806 831 5.299279 CCTGAGAGAGACTAAGACCAGATTC 59.701 48.000 0.00 0.00 0.00 2.52
820 846 4.284490 ACACTAAAACATGCCTGAGAGAGA 59.716 41.667 0.00 0.00 0.00 3.10
821 847 4.573900 ACACTAAAACATGCCTGAGAGAG 58.426 43.478 0.00 0.00 0.00 3.20
822 848 4.284490 AGACACTAAAACATGCCTGAGAGA 59.716 41.667 0.00 0.00 0.00 3.10
823 849 4.573900 AGACACTAAAACATGCCTGAGAG 58.426 43.478 0.00 0.00 0.00 3.20
986 1020 1.651240 CGTCATTGCAGCTTCTGGGG 61.651 60.000 0.00 0.00 31.21 4.96
1287 1759 0.537188 GGTTCCTCTCGAATGCAGGA 59.463 55.000 0.00 0.00 34.31 3.86
1332 1804 0.462789 TATTCGCTTTCGGGGGTCTC 59.537 55.000 0.00 0.00 36.13 3.36
1392 1865 1.993948 TGCCTCTGCAGCAGATCCT 60.994 57.895 25.59 0.00 44.23 3.24
1635 2117 1.603678 GCCTGCTTGGTTTGTGATGTG 60.604 52.381 0.00 0.00 38.35 3.21
1688 2170 2.038164 AGACTTTTAGGTTGGTCCGGTC 59.962 50.000 0.00 0.00 41.99 4.79
1729 2211 4.010349 GTGTAAACCTTCTTGATCCCTGG 58.990 47.826 0.00 0.00 0.00 4.45
1884 2770 1.337821 GACTCAAGGTGCGAGTAACG 58.662 55.000 0.00 0.00 43.72 3.18
1900 2786 1.956170 CTGGTGCTTTCGTGCGACT 60.956 57.895 0.00 0.00 35.36 4.18
1907 2793 2.670934 AGGCTGCTGGTGCTTTCG 60.671 61.111 0.00 0.00 40.48 3.46
1958 2844 4.386049 CAGAACGTGAAGTAGACAATGGTC 59.614 45.833 0.00 0.00 44.66 4.02
2006 2893 6.901357 GCATTTCTCATCAAAAACAAACACAC 59.099 34.615 0.00 0.00 0.00 3.82
2044 2931 2.836667 ACCATTTGCAGATTTCCCCAT 58.163 42.857 0.00 0.00 0.00 4.00
2208 3098 5.186942 GTGGTTTTCTCTCCCTTATTCTCC 58.813 45.833 0.00 0.00 0.00 3.71
2244 3135 2.686405 AGTTTTTCCAGTTCGGGACAAC 59.314 45.455 0.00 0.00 36.46 3.32
2300 3191 0.393808 TTTAGCCCCATTCAGCCGTC 60.394 55.000 0.00 0.00 0.00 4.79
2340 3234 1.949525 GGCAGCAACTTCTCTGACAAA 59.050 47.619 0.00 0.00 38.22 2.83
2507 3430 5.046950 GGTGGCAAGTTAAATGTATTTCCCA 60.047 40.000 0.00 0.00 0.00 4.37
2581 3588 3.217626 CATTTATCTGGGGACTTGCCTC 58.782 50.000 0.00 0.00 37.80 4.70
2582 3589 2.091665 CCATTTATCTGGGGACTTGCCT 60.092 50.000 0.00 0.00 36.66 4.75
2583 3590 2.310538 CCATTTATCTGGGGACTTGCC 58.689 52.381 0.00 0.00 32.28 4.52
2584 3591 3.018423 ACCATTTATCTGGGGACTTGC 57.982 47.619 0.00 0.00 40.85 4.01
2585 3592 5.359860 GGTTTACCATTTATCTGGGGACTTG 59.640 44.000 0.00 0.00 40.85 3.16
2586 3593 5.015817 TGGTTTACCATTTATCTGGGGACTT 59.984 40.000 0.00 0.00 42.01 3.01
2587 3594 4.542525 TGGTTTACCATTTATCTGGGGACT 59.457 41.667 0.00 0.00 42.01 3.85
2588 3595 4.862371 TGGTTTACCATTTATCTGGGGAC 58.138 43.478 0.00 0.00 42.01 4.46
2602 3609 1.037579 GCAGCCCCAGATGGTTTACC 61.038 60.000 0.00 0.00 0.00 2.85
2603 3610 0.034089 AGCAGCCCCAGATGGTTTAC 60.034 55.000 0.00 0.00 36.55 2.01
2604 3611 1.490490 CTAGCAGCCCCAGATGGTTTA 59.510 52.381 0.00 0.00 41.15 2.01
2605 3612 0.257039 CTAGCAGCCCCAGATGGTTT 59.743 55.000 0.00 0.00 41.15 3.27
2606 3613 0.916358 ACTAGCAGCCCCAGATGGTT 60.916 55.000 0.00 0.00 41.15 3.67
2607 3614 1.307343 ACTAGCAGCCCCAGATGGT 60.307 57.895 0.00 0.00 43.67 3.55
2608 3615 1.449353 GACTAGCAGCCCCAGATGG 59.551 63.158 0.00 0.00 0.00 3.51
2609 3616 1.340399 TGGACTAGCAGCCCCAGATG 61.340 60.000 0.00 0.00 0.00 2.90
2610 3617 0.401105 ATGGACTAGCAGCCCCAGAT 60.401 55.000 0.00 0.00 31.48 2.90
2611 3618 1.003442 ATGGACTAGCAGCCCCAGA 59.997 57.895 0.00 0.00 31.48 3.86
2612 3619 1.340399 TGATGGACTAGCAGCCCCAG 61.340 60.000 0.00 0.00 31.48 4.45
2613 3620 1.306911 TGATGGACTAGCAGCCCCA 60.307 57.895 0.00 0.00 0.00 4.96
2614 3621 1.147153 GTGATGGACTAGCAGCCCC 59.853 63.158 0.00 0.00 0.00 5.80
2615 3622 1.147153 GGTGATGGACTAGCAGCCC 59.853 63.158 0.00 0.00 37.22 5.19
2616 3623 0.179062 CAGGTGATGGACTAGCAGCC 60.179 60.000 2.43 0.00 43.87 4.85
2617 3624 0.826715 TCAGGTGATGGACTAGCAGC 59.173 55.000 0.00 0.00 43.19 5.25
2618 3625 2.419297 GGTTCAGGTGATGGACTAGCAG 60.419 54.545 0.00 0.00 37.58 4.24
2619 3626 1.555075 GGTTCAGGTGATGGACTAGCA 59.445 52.381 0.00 0.00 37.58 3.49
2620 3627 1.555075 TGGTTCAGGTGATGGACTAGC 59.445 52.381 0.00 0.00 37.58 3.42
2621 3628 3.981071 TTGGTTCAGGTGATGGACTAG 57.019 47.619 0.00 0.00 37.58 2.57
2622 3629 4.715534 TTTTGGTTCAGGTGATGGACTA 57.284 40.909 0.00 0.00 37.58 2.59
2623 3630 3.593442 TTTTGGTTCAGGTGATGGACT 57.407 42.857 0.00 0.00 37.58 3.85
2624 3631 4.039124 ACATTTTTGGTTCAGGTGATGGAC 59.961 41.667 0.00 0.00 36.57 4.02
2625 3632 4.222336 ACATTTTTGGTTCAGGTGATGGA 58.778 39.130 0.00 0.00 0.00 3.41
2626 3633 4.605640 ACATTTTTGGTTCAGGTGATGG 57.394 40.909 0.00 0.00 0.00 3.51
2627 3634 5.469479 GGTACATTTTTGGTTCAGGTGATG 58.531 41.667 0.00 0.00 0.00 3.07
2628 3635 4.526650 GGGTACATTTTTGGTTCAGGTGAT 59.473 41.667 0.00 0.00 0.00 3.06
2629 3636 3.892588 GGGTACATTTTTGGTTCAGGTGA 59.107 43.478 0.00 0.00 0.00 4.02
2630 3637 3.305064 CGGGTACATTTTTGGTTCAGGTG 60.305 47.826 0.00 0.00 0.00 4.00
2631 3638 2.888414 CGGGTACATTTTTGGTTCAGGT 59.112 45.455 0.00 0.00 0.00 4.00
2632 3639 2.888414 ACGGGTACATTTTTGGTTCAGG 59.112 45.455 0.00 0.00 0.00 3.86
2633 3640 3.305064 CCACGGGTACATTTTTGGTTCAG 60.305 47.826 0.00 0.00 0.00 3.02
2634 3641 2.623889 CCACGGGTACATTTTTGGTTCA 59.376 45.455 0.00 0.00 0.00 3.18
2635 3642 2.029739 CCCACGGGTACATTTTTGGTTC 60.030 50.000 0.00 0.00 0.00 3.62
2636 3643 1.964933 CCCACGGGTACATTTTTGGTT 59.035 47.619 0.00 0.00 0.00 3.67
2637 3644 1.145325 TCCCACGGGTACATTTTTGGT 59.855 47.619 1.07 0.00 36.47 3.67
2638 3645 1.542472 GTCCCACGGGTACATTTTTGG 59.458 52.381 1.07 0.00 36.47 3.28
2639 3646 2.231529 TGTCCCACGGGTACATTTTTG 58.768 47.619 1.07 0.00 36.47 2.44
2640 3647 2.660670 TGTCCCACGGGTACATTTTT 57.339 45.000 1.07 0.00 36.47 1.94
2641 3648 2.660670 TTGTCCCACGGGTACATTTT 57.339 45.000 1.07 0.00 36.47 1.82
2642 3649 2.040545 TCATTGTCCCACGGGTACATTT 59.959 45.455 1.07 0.00 36.47 2.32
2643 3650 1.631388 TCATTGTCCCACGGGTACATT 59.369 47.619 1.07 0.07 36.47 2.71
2644 3651 1.209504 CTCATTGTCCCACGGGTACAT 59.790 52.381 1.07 0.00 36.47 2.29
2645 3652 0.611200 CTCATTGTCCCACGGGTACA 59.389 55.000 1.07 2.83 36.47 2.90
2646 3653 0.107848 CCTCATTGTCCCACGGGTAC 60.108 60.000 1.07 0.12 36.47 3.34
2647 3654 1.906105 GCCTCATTGTCCCACGGGTA 61.906 60.000 1.07 0.00 36.47 3.69
2648 3655 3.077907 CCTCATTGTCCCACGGGT 58.922 61.111 1.07 0.00 36.47 5.28
2649 3656 2.438434 GCCTCATTGTCCCACGGG 60.438 66.667 0.00 0.00 0.00 5.28
2650 3657 1.303236 TTGCCTCATTGTCCCACGG 60.303 57.895 0.00 0.00 0.00 4.94
2651 3658 0.606401 ACTTGCCTCATTGTCCCACG 60.606 55.000 0.00 0.00 0.00 4.94
2652 3659 1.168714 GACTTGCCTCATTGTCCCAC 58.831 55.000 0.00 0.00 0.00 4.61
2653 3660 0.038166 GGACTTGCCTCATTGTCCCA 59.962 55.000 0.00 0.00 42.11 4.37
2654 3661 2.873797 GGACTTGCCTCATTGTCCC 58.126 57.895 0.00 0.00 42.11 4.46
2697 3705 1.901833 TCAAGTGATGGACTAGCAGCA 59.098 47.619 0.00 0.00 33.09 4.41
2714 3722 3.254657 CCATGGGTACTTTTTCGCTTCAA 59.745 43.478 2.85 0.00 0.00 2.69
2739 3747 3.641434 ATCTGGGGACTTGTCTCATTG 57.359 47.619 2.89 0.00 0.00 2.82
2742 3750 4.080356 CCATTTATCTGGGGACTTGTCTCA 60.080 45.833 2.89 1.13 32.28 3.27
2743 3751 4.455606 CCATTTATCTGGGGACTTGTCTC 58.544 47.826 0.61 0.00 32.28 3.36
2744 3752 3.372025 GCCATTTATCTGGGGACTTGTCT 60.372 47.826 0.61 0.00 36.75 3.41
2745 3753 2.952310 GCCATTTATCTGGGGACTTGTC 59.048 50.000 0.00 0.00 36.75 3.18
2746 3754 2.311542 TGCCATTTATCTGGGGACTTGT 59.688 45.455 0.00 0.00 36.75 3.16
2747 3755 3.017048 TGCCATTTATCTGGGGACTTG 57.983 47.619 0.00 0.00 36.75 3.16
2748 3756 3.756082 TTGCCATTTATCTGGGGACTT 57.244 42.857 0.00 0.00 36.75 3.01
2749 3757 3.365472 GTTTGCCATTTATCTGGGGACT 58.635 45.455 0.00 0.00 36.75 3.85
2750 3758 2.430694 GGTTTGCCATTTATCTGGGGAC 59.569 50.000 0.00 0.00 36.75 4.46
2751 3759 2.043664 TGGTTTGCCATTTATCTGGGGA 59.956 45.455 0.00 0.00 40.46 4.81
2752 3760 2.465813 TGGTTTGCCATTTATCTGGGG 58.534 47.619 0.00 0.00 40.46 4.96
2770 3778 0.179062 GGACTAGCAGCACCAGATGG 60.179 60.000 0.00 0.00 42.17 3.51
2771 3779 0.538584 TGGACTAGCAGCACCAGATG 59.461 55.000 0.00 0.00 0.00 2.90
2772 3780 1.415659 GATGGACTAGCAGCACCAGAT 59.584 52.381 0.00 0.00 35.84 2.90
2773 3781 0.826715 GATGGACTAGCAGCACCAGA 59.173 55.000 0.00 0.00 35.84 3.86
2774 3782 0.829333 AGATGGACTAGCAGCACCAG 59.171 55.000 0.00 0.00 35.84 4.00
2775 3783 0.826715 GAGATGGACTAGCAGCACCA 59.173 55.000 0.00 0.00 36.83 4.17
2776 3784 0.105778 GGAGATGGACTAGCAGCACC 59.894 60.000 0.00 0.00 0.00 5.01
2777 3785 1.118838 AGGAGATGGACTAGCAGCAC 58.881 55.000 0.00 0.00 0.00 4.40
2778 3786 1.117994 CAGGAGATGGACTAGCAGCA 58.882 55.000 0.00 0.00 0.00 4.41
2779 3787 1.407936 TCAGGAGATGGACTAGCAGC 58.592 55.000 0.00 0.00 0.00 5.25
2780 3788 2.224018 GCTTCAGGAGATGGACTAGCAG 60.224 54.545 0.00 0.00 0.00 4.24
2781 3789 1.759445 GCTTCAGGAGATGGACTAGCA 59.241 52.381 0.00 0.00 0.00 3.49
2782 3790 1.269517 CGCTTCAGGAGATGGACTAGC 60.270 57.143 0.00 0.00 0.00 3.42
2783 3791 2.302260 TCGCTTCAGGAGATGGACTAG 58.698 52.381 0.00 0.00 0.00 2.57
2784 3792 2.437085 TCGCTTCAGGAGATGGACTA 57.563 50.000 0.00 0.00 0.00 2.59
2785 3793 1.561643 TTCGCTTCAGGAGATGGACT 58.438 50.000 0.00 0.00 0.00 3.85
2786 3794 2.386661 TTTCGCTTCAGGAGATGGAC 57.613 50.000 0.00 0.00 0.00 4.02
2787 3795 3.244561 ACTTTTTCGCTTCAGGAGATGGA 60.245 43.478 0.00 0.00 0.00 3.41
2788 3796 3.077359 ACTTTTTCGCTTCAGGAGATGG 58.923 45.455 0.00 0.00 0.00 3.51
2789 3797 4.093556 GGTACTTTTTCGCTTCAGGAGATG 59.906 45.833 0.00 0.00 0.00 2.90
2790 3798 4.254492 GGTACTTTTTCGCTTCAGGAGAT 58.746 43.478 0.00 0.00 0.00 2.75
2791 3799 3.556423 GGGTACTTTTTCGCTTCAGGAGA 60.556 47.826 0.00 0.00 0.00 3.71
2792 3800 2.742589 GGGTACTTTTTCGCTTCAGGAG 59.257 50.000 0.00 0.00 0.00 3.69
2793 3801 2.105134 TGGGTACTTTTTCGCTTCAGGA 59.895 45.455 0.00 0.00 0.00 3.86
2794 3802 2.500229 TGGGTACTTTTTCGCTTCAGG 58.500 47.619 0.00 0.00 0.00 3.86
2795 3803 3.119849 CCATGGGTACTTTTTCGCTTCAG 60.120 47.826 2.85 0.00 0.00 3.02
2796 3804 2.817258 CCATGGGTACTTTTTCGCTTCA 59.183 45.455 2.85 0.00 0.00 3.02
2797 3805 2.163613 CCCATGGGTACTTTTTCGCTTC 59.836 50.000 23.93 0.00 0.00 3.86
2798 3806 2.167662 CCCATGGGTACTTTTTCGCTT 58.832 47.619 23.93 0.00 0.00 4.68
2799 3807 1.353022 TCCCATGGGTACTTTTTCGCT 59.647 47.619 30.28 0.00 36.47 4.93
2800 3808 1.471287 GTCCCATGGGTACTTTTTCGC 59.529 52.381 30.28 5.49 36.47 4.70
2801 3809 2.785562 TGTCCCATGGGTACTTTTTCG 58.214 47.619 30.28 0.42 36.47 3.46
2802 3810 4.770010 TCATTGTCCCATGGGTACTTTTTC 59.230 41.667 30.28 11.60 36.47 2.29
2803 3811 4.746466 TCATTGTCCCATGGGTACTTTTT 58.254 39.130 30.28 7.50 36.47 1.94
2804 3812 4.344104 CTCATTGTCCCATGGGTACTTTT 58.656 43.478 30.28 12.36 36.47 2.27
2805 3813 3.309121 CCTCATTGTCCCATGGGTACTTT 60.309 47.826 30.28 14.49 36.47 2.66
2806 3814 2.242196 CCTCATTGTCCCATGGGTACTT 59.758 50.000 30.28 14.79 36.47 2.24
2807 3815 1.846439 CCTCATTGTCCCATGGGTACT 59.154 52.381 30.28 12.20 36.47 2.73
2808 3816 1.750682 GCCTCATTGTCCCATGGGTAC 60.751 57.143 30.28 24.55 36.47 3.34
2809 3817 0.550914 GCCTCATTGTCCCATGGGTA 59.449 55.000 30.28 17.75 36.47 3.69
2810 3818 1.307647 GCCTCATTGTCCCATGGGT 59.692 57.895 30.28 8.41 36.47 4.51
2811 3819 0.324552 TTGCCTCATTGTCCCATGGG 60.325 55.000 26.30 26.30 0.00 4.00
2812 3820 1.108776 CTTGCCTCATTGTCCCATGG 58.891 55.000 4.14 4.14 0.00 3.66
2813 3821 0.458669 GCTTGCCTCATTGTCCCATG 59.541 55.000 0.00 0.00 0.00 3.66
2814 3822 0.685458 GGCTTGCCTCATTGTCCCAT 60.685 55.000 4.11 0.00 0.00 4.00
2815 3823 1.304381 GGCTTGCCTCATTGTCCCA 60.304 57.895 4.11 0.00 0.00 4.37
2816 3824 2.054453 GGGCTTGCCTCATTGTCCC 61.054 63.158 11.71 0.00 0.00 4.46
2817 3825 2.054453 GGGGCTTGCCTCATTGTCC 61.054 63.158 11.71 0.00 0.00 4.02
2818 3826 2.054453 GGGGGCTTGCCTCATTGTC 61.054 63.158 14.02 0.00 0.00 3.18
2819 3827 2.037847 GGGGGCTTGCCTCATTGT 59.962 61.111 14.02 0.00 0.00 2.71
2820 3828 2.037687 TGGGGGCTTGCCTCATTG 59.962 61.111 14.02 0.00 0.00 2.82
2821 3829 1.587522 ATCTGGGGGCTTGCCTCATT 61.588 55.000 14.02 0.94 0.00 2.57
2822 3830 0.698886 TATCTGGGGGCTTGCCTCAT 60.699 55.000 14.02 1.07 0.00 2.90
2823 3831 0.918799 TTATCTGGGGGCTTGCCTCA 60.919 55.000 14.02 10.26 0.00 3.86
2882 3891 3.036819 TCTCCCATGTCTCTGAATCTGG 58.963 50.000 0.00 0.00 0.00 3.86
2958 3971 5.556355 ATGTGTCATCATGTAGCACTTTG 57.444 39.130 9.76 0.00 0.00 2.77
3075 4100 7.936496 TTACTATGGCTGTGAAATGATTCAA 57.064 32.000 0.00 0.00 46.66 2.69
3128 4155 6.809196 GTGACAAACAGATAGGAGTTACTCTG 59.191 42.308 12.41 4.79 40.71 3.35
3129 4156 6.722129 AGTGACAAACAGATAGGAGTTACTCT 59.278 38.462 12.41 1.35 0.00 3.24
3170 4197 1.644509 TCCATCCCGTCCTGGATATG 58.355 55.000 0.00 2.30 43.39 1.78
3223 4250 8.375608 TGTTCTCTCTTTCTTCTGAAGAATTG 57.624 34.615 27.93 22.90 46.15 2.32
3424 4451 4.074970 CCTTCAGTTCTACAAATGTGGCT 58.925 43.478 0.00 0.00 0.00 4.75
3654 6520 8.587952 AAATGCACAATTAACACCTAACTTTC 57.412 30.769 0.00 0.00 0.00 2.62
3704 6571 3.459145 TGTGCTTAAGCGTACACTTTGA 58.541 40.909 21.97 0.00 45.83 2.69
3732 6611 8.432110 TCTATTCGATAGCAAAATGTTTAGCA 57.568 30.769 0.00 0.00 32.85 3.49
3738 6617 5.615289 AGGCTCTATTCGATAGCAAAATGT 58.385 37.500 10.49 0.00 38.01 2.71
3740 6620 6.402222 CCTAGGCTCTATTCGATAGCAAAAT 58.598 40.000 0.00 0.00 38.01 1.82
3752 6632 2.340443 GCGCGCCTAGGCTCTATT 59.660 61.111 30.55 0.00 39.32 1.73
3837 6724 7.082602 GGCACTGATAATGATTGATCAATGAC 58.917 38.462 25.37 12.38 40.69 3.06
3867 6754 2.684927 GCCACAGCAGGATTATTGGAGT 60.685 50.000 0.00 0.00 39.53 3.85
3881 7559 2.092323 CCCTAACCTTAAAGCCACAGC 58.908 52.381 0.00 0.00 40.32 4.40
4126 10916 0.315251 GGGAAAAGCTTGGCTCACAC 59.685 55.000 0.00 0.00 38.25 3.82
4294 11191 9.300681 TGTGATTTCTTATCCTGATTTTCTGTT 57.699 29.630 0.00 0.00 0.00 3.16
4295 11192 8.868522 TGTGATTTCTTATCCTGATTTTCTGT 57.131 30.769 0.00 0.00 0.00 3.41
4305 11202 9.844257 CCTCTTTTAGATGTGATTTCTTATCCT 57.156 33.333 0.00 0.00 0.00 3.24
4311 11208 9.807921 TTTTACCCTCTTTTAGATGTGATTTCT 57.192 29.630 0.00 0.00 0.00 2.52
4351 11254 2.180432 AAGGAACAGGCGAAGGTAAC 57.820 50.000 0.00 0.00 0.00 2.50
4395 11298 4.819630 ACTGTTAAATCAACGCAAGAAGGA 59.180 37.500 0.00 0.00 40.26 3.36
4420 11324 9.823647 AGTAATGACATATTAGTTCTGAACTGG 57.176 33.333 28.46 16.17 42.84 4.00
4452 11359 7.502226 ACATCATAGTTTCTTGTGTTCCTGAAA 59.498 33.333 0.00 0.00 0.00 2.69
4474 11381 3.058639 GCACTGGTTCTTTGTCTGACATC 60.059 47.826 11.86 0.92 0.00 3.06
4516 11423 3.208594 ACAACCTAAAACGGACCTGTTC 58.791 45.455 2.83 0.00 0.00 3.18
4716 11625 1.194781 TCTGCACCTCAACTCCCTCC 61.195 60.000 0.00 0.00 0.00 4.30
4888 11800 3.370840 TCCTGCATTGACCAGCTTATT 57.629 42.857 0.00 0.00 0.00 1.40
4983 11908 8.344446 TCATTGTCAGAAAACTCATGATTCAT 57.656 30.769 9.58 0.00 0.00 2.57
4999 11924 4.074259 TGACAAATGGGTCTCATTGTCAG 58.926 43.478 18.78 6.36 44.68 3.51
5088 12016 9.838339 CTGAATAATCCAAATAGGTGAAGTACT 57.162 33.333 0.00 0.00 39.02 2.73
5163 12125 9.125026 GAATCCAATCATGTGTCTAACCTTATT 57.875 33.333 0.00 0.00 0.00 1.40
5168 12130 5.297776 CAGGAATCCAATCATGTGTCTAACC 59.702 44.000 0.61 0.00 0.00 2.85
5176 12138 5.068198 GCATAACACAGGAATCCAATCATGT 59.932 40.000 0.61 0.00 44.43 3.21
5200 12164 2.767505 GTTTAGGATATGCCGGACCTG 58.232 52.381 5.05 0.00 43.43 4.00
5656 12700 9.601217 GTCCAAAGAGCAGAAGATAGTAATAAA 57.399 33.333 0.00 0.00 0.00 1.40
5657 12701 8.982723 AGTCCAAAGAGCAGAAGATAGTAATAA 58.017 33.333 0.00 0.00 0.00 1.40
5697 13034 4.171234 ACAGGCTCTAACCCTATATGCAT 58.829 43.478 3.79 3.79 0.00 3.96
5698 13035 3.587498 ACAGGCTCTAACCCTATATGCA 58.413 45.455 0.00 0.00 0.00 3.96
5818 13685 9.226606 CAAGGTAAAGTATAAGGATTCACAACA 57.773 33.333 0.00 0.00 0.00 3.33
5819 13686 9.227777 ACAAGGTAAAGTATAAGGATTCACAAC 57.772 33.333 0.00 0.00 0.00 3.32
5904 13772 3.100671 ACAAGACATAGAGGACCAGGTC 58.899 50.000 11.70 11.70 0.00 3.85
6169 14038 6.016360 TGACAAAGGTTAACATGATTCCACAG 60.016 38.462 8.10 0.00 0.00 3.66
6223 14095 7.468357 GCTTGCAATCTATAATCAAAGTGCTCT 60.468 37.037 0.00 0.00 0.00 4.09
6269 14143 6.380846 ACAATGTTGGAATATTATGTGCCTGT 59.619 34.615 0.00 0.00 0.00 4.00
6281 14155 6.070938 TCCATGCATGAAACAATGTTGGAATA 60.071 34.615 28.31 0.00 38.21 1.75
6305 14184 5.772521 ACCACATTATTCAGCAACAAACTC 58.227 37.500 0.00 0.00 0.00 3.01
6374 14256 7.649533 ATTTCTTCTAATCATGTGCCAATGA 57.350 32.000 1.30 1.30 40.73 2.57
6442 14362 9.567776 TTTCCTCTTAACAATGATAACAGTGAA 57.432 29.630 7.47 0.00 43.54 3.18
6466 14386 5.505654 GCCGTATGATGATTCATTCCGTTTT 60.506 40.000 0.00 0.00 42.61 2.43
6470 14390 3.066380 TGCCGTATGATGATTCATTCCG 58.934 45.455 0.00 1.75 42.61 4.30
6488 14408 2.941720 CAGATTTCTTCTAGTGGCTGCC 59.058 50.000 12.87 12.87 31.77 4.85
6653 14579 1.599071 GCGATCTTGATTTCGGCATCA 59.401 47.619 0.00 0.00 35.93 3.07
6668 14594 1.804748 ACCTTTTGAACCTTCGCGATC 59.195 47.619 10.88 4.80 0.00 3.69
6701 14627 0.625849 GGCATCCTTCCCTGGAGAAA 59.374 55.000 0.00 0.00 39.78 2.52
6713 14641 1.439228 CTGATCGACACGGCATCCT 59.561 57.895 0.00 0.00 0.00 3.24
6723 14651 2.674796 AAGGTTAGTGCCTGATCGAC 57.325 50.000 0.00 0.00 39.17 4.20
6732 14665 2.223745 TCGTGGGAAAAAGGTTAGTGC 58.776 47.619 0.00 0.00 0.00 4.40
6750 14683 1.394917 CTCTCTGCGGAACCATTTTCG 59.605 52.381 0.00 0.00 0.00 3.46
6772 14705 2.405618 ATCCATTCATCCTCCTCCGA 57.594 50.000 0.00 0.00 0.00 4.55
6777 14710 5.357032 ACGTGTTTTAATCCATTCATCCTCC 59.643 40.000 0.00 0.00 0.00 4.30
6780 14713 4.798387 GCACGTGTTTTAATCCATTCATCC 59.202 41.667 18.38 0.00 0.00 3.51
6790 14723 4.749245 CTCCTTGAGCACGTGTTTTAAT 57.251 40.909 18.38 0.00 0.00 1.40
6819 14752 0.530288 TGATCAATCTGCGGTGTCGA 59.470 50.000 0.00 0.00 39.00 4.20
6857 14790 4.456222 TCGCCATAGCTATCTACTTCTGTC 59.544 45.833 2.34 0.00 36.60 3.51
6875 14873 2.349755 GCCCTACAGGTTTCGCCA 59.650 61.111 0.00 0.00 40.61 5.69
6896 14894 0.307453 TGCTGTTTGTGACGTGATGC 59.693 50.000 0.00 0.00 0.00 3.91
6898 14896 1.229428 CCTGCTGTTTGTGACGTGAT 58.771 50.000 0.00 0.00 0.00 3.06
6899 14897 0.107897 ACCTGCTGTTTGTGACGTGA 60.108 50.000 0.00 0.00 0.00 4.35
6914 14912 0.460284 GTGAGCCGTATGTGGACCTG 60.460 60.000 0.00 0.00 0.00 4.00
6915 14913 0.902984 TGTGAGCCGTATGTGGACCT 60.903 55.000 0.00 0.00 0.00 3.85
6916 14914 0.036765 TTGTGAGCCGTATGTGGACC 60.037 55.000 0.00 0.00 0.00 4.46
6917 14915 1.732259 CTTTGTGAGCCGTATGTGGAC 59.268 52.381 0.00 0.00 0.00 4.02
6918 14916 1.338674 CCTTTGTGAGCCGTATGTGGA 60.339 52.381 0.00 0.00 0.00 4.02
6920 14918 1.086696 CCCTTTGTGAGCCGTATGTG 58.913 55.000 0.00 0.00 0.00 3.21
6921 14919 0.690762 ACCCTTTGTGAGCCGTATGT 59.309 50.000 0.00 0.00 0.00 2.29
6923 14921 2.159382 CAAACCCTTTGTGAGCCGTAT 58.841 47.619 0.00 0.00 35.94 3.06
6924 14922 1.600023 CAAACCCTTTGTGAGCCGTA 58.400 50.000 0.00 0.00 35.94 4.02
6925 14923 1.734388 GCAAACCCTTTGTGAGCCGT 61.734 55.000 0.00 0.00 42.56 5.68
6926 14924 1.007387 GCAAACCCTTTGTGAGCCG 60.007 57.895 0.00 0.00 42.56 5.52
6927 14925 0.315251 GAGCAAACCCTTTGTGAGCC 59.685 55.000 0.00 0.00 42.56 4.70
6928 14926 1.032014 TGAGCAAACCCTTTGTGAGC 58.968 50.000 0.00 0.00 42.56 4.26
6929 14927 2.023673 TGTGAGCAAACCCTTTGTGAG 58.976 47.619 0.00 0.00 42.56 3.51
6931 14929 1.750778 ACTGTGAGCAAACCCTTTGTG 59.249 47.619 0.00 0.00 42.56 3.33
6932 14930 2.143876 ACTGTGAGCAAACCCTTTGT 57.856 45.000 0.00 0.00 42.56 2.83
6933 14931 3.525268 AAACTGTGAGCAAACCCTTTG 57.475 42.857 0.00 0.00 43.44 2.77
6936 14934 2.689983 CTGAAAACTGTGAGCAAACCCT 59.310 45.455 0.00 0.00 0.00 4.34
6939 14937 5.160641 TCAAACTGAAAACTGTGAGCAAAC 58.839 37.500 0.00 0.00 0.00 2.93
6946 14987 9.226345 GAATAGTTCTTCAAACTGAAAACTGTG 57.774 33.333 17.59 0.00 35.73 3.66
6954 14995 6.545666 TGCTTTGGAATAGTTCTTCAAACTGA 59.454 34.615 0.81 0.00 0.00 3.41
6993 15034 5.932883 TGAAACGGTATGCATTGTAACTACA 59.067 36.000 3.54 0.00 0.00 2.74
7076 15150 5.705609 AACAATACCAGGACACAATTCAC 57.294 39.130 0.00 0.00 0.00 3.18
7116 15190 9.647797 TGACTTTGTACTTGATCATTACGTTAT 57.352 29.630 0.00 0.00 0.00 1.89
7120 15194 7.346208 TGTGACTTTGTACTTGATCATTACG 57.654 36.000 0.00 0.00 0.00 3.18
7185 15263 6.071560 TCACCAGACGAGTACACTTGATTTAT 60.072 38.462 3.58 0.00 0.00 1.40
7229 15307 0.667993 CAAAGAAAAGCGGCACTGGA 59.332 50.000 1.45 0.00 0.00 3.86
7233 15311 0.312102 AGCTCAAAGAAAAGCGGCAC 59.688 50.000 1.45 0.00 43.37 5.01
7296 15376 6.005198 TGAATAACAACGGGTAAAAGGACAT 58.995 36.000 0.00 0.00 0.00 3.06
7301 15381 6.009115 AGCTTGAATAACAACGGGTAAAAG 57.991 37.500 0.00 0.00 34.56 2.27
7302 15382 6.394025 AAGCTTGAATAACAACGGGTAAAA 57.606 33.333 0.00 0.00 34.56 1.52
7303 15383 6.394025 AAAGCTTGAATAACAACGGGTAAA 57.606 33.333 0.00 0.00 34.56 2.01
7309 15389 5.077424 GTCCGTAAAGCTTGAATAACAACG 58.923 41.667 0.00 0.74 34.56 4.10
7313 15393 5.600908 TGTGTCCGTAAAGCTTGAATAAC 57.399 39.130 0.00 0.00 0.00 1.89
7320 15400 3.064820 CACAACTTGTGTCCGTAAAGCTT 59.935 43.478 13.02 0.00 43.08 3.74
7325 15405 1.301423 GCCACAACTTGTGTCCGTAA 58.699 50.000 18.53 0.00 46.45 3.18
7328 15408 0.876777 TACGCCACAACTTGTGTCCG 60.877 55.000 21.27 21.27 46.45 4.79
7330 15410 1.578583 ACTACGCCACAACTTGTGTC 58.421 50.000 18.53 6.99 46.45 3.67
7333 15413 2.894763 TGTACTACGCCACAACTTGT 57.105 45.000 0.00 0.00 0.00 3.16
7345 15425 4.672801 GCAGCTTTCCTTTGCATGTACTAC 60.673 45.833 0.00 0.00 37.75 2.73
7346 15426 3.440173 GCAGCTTTCCTTTGCATGTACTA 59.560 43.478 0.00 0.00 37.75 1.82
7351 15431 3.444916 CATAGCAGCTTTCCTTTGCATG 58.555 45.455 0.00 0.00 40.22 4.06
7359 15439 0.099436 CGTTGGCATAGCAGCTTTCC 59.901 55.000 0.00 0.00 34.17 3.13
7361 15441 1.755179 ATCGTTGGCATAGCAGCTTT 58.245 45.000 0.00 0.00 34.17 3.51
7371 15451 3.945346 ACCACATACTTTATCGTTGGCA 58.055 40.909 0.00 0.00 0.00 4.92
7375 15455 6.110033 TGCATGTACCACATACTTTATCGTT 58.890 36.000 0.00 0.00 36.53 3.85
7377 15457 6.597262 TTGCATGTACCACATACTTTATCG 57.403 37.500 0.00 0.00 36.53 2.92
7390 15470 2.890945 AGGTTCCTGTTTTGCATGTACC 59.109 45.455 0.00 0.00 34.84 3.34
7458 15538 9.213799 GCATCCAAACTATTCCAAATAAACAAA 57.786 29.630 0.00 0.00 0.00 2.83
7461 15541 8.770438 TTGCATCCAAACTATTCCAAATAAAC 57.230 30.769 0.00 0.00 0.00 2.01
7465 15545 7.124599 TCTCATTGCATCCAAACTATTCCAAAT 59.875 33.333 0.00 0.00 34.05 2.32
7485 15565 4.202503 CCATGCCTACCAATACCTCTCATT 60.203 45.833 0.00 0.00 0.00 2.57
7493 15573 3.128349 CGTGTACCATGCCTACCAATAC 58.872 50.000 0.00 0.00 0.00 1.89
7504 15584 3.000041 ACACAGCATAACGTGTACCATG 59.000 45.455 0.00 0.00 44.32 3.66
7509 15589 3.388345 TGGAACACAGCATAACGTGTA 57.612 42.857 0.00 0.00 45.37 2.90
7524 15604 2.479560 GCTGCAAACCGGAATATGGAAC 60.480 50.000 9.46 0.00 0.00 3.62
7526 15606 1.064758 AGCTGCAAACCGGAATATGGA 60.065 47.619 9.46 1.17 0.00 3.41
7527 15607 1.392589 AGCTGCAAACCGGAATATGG 58.607 50.000 9.46 0.00 0.00 2.74
7531 15611 1.290009 GCAAGCTGCAAACCGGAAT 59.710 52.632 9.46 0.00 44.26 3.01
7555 15635 4.111916 CGGCAAGTTTTTGTGATTTCTGT 58.888 39.130 0.00 0.00 36.65 3.41
7566 15646 1.063469 CGTGTCTGACGGCAAGTTTTT 59.937 47.619 0.00 0.00 44.85 1.94
7578 15658 3.081710 TCTCTATCAACCCGTGTCTGA 57.918 47.619 0.00 0.00 0.00 3.27
7602 15682 0.890683 TGAGAATGCTGCGAGAGACA 59.109 50.000 0.00 0.00 0.00 3.41
7620 15700 1.086067 CCTATGCACAGTGCTCGGTG 61.086 60.000 25.83 13.67 45.31 4.94
7652 15741 7.099764 CACTCTTGAAGTACATACATGTTCCT 58.900 38.462 2.30 0.00 41.97 3.36
7665 15754 1.975680 GGGGTGTCCACTCTTGAAGTA 59.024 52.381 0.00 0.00 36.07 2.24
7666 15755 0.765510 GGGGTGTCCACTCTTGAAGT 59.234 55.000 0.00 0.00 39.44 3.01
7706 15795 8.722480 TTTCAGAGATAAATGTATGTCCACTG 57.278 34.615 0.00 0.00 31.71 3.66
7707 15796 9.334947 CATTTCAGAGATAAATGTATGTCCACT 57.665 33.333 0.00 0.00 38.78 4.00
7708 15797 9.330063 TCATTTCAGAGATAAATGTATGTCCAC 57.670 33.333 8.04 0.00 42.39 4.02
7709 15798 9.551734 CTCATTTCAGAGATAAATGTATGTCCA 57.448 33.333 8.04 0.00 42.39 4.02
7710 15799 9.770097 TCTCATTTCAGAGATAAATGTATGTCC 57.230 33.333 8.04 0.00 42.39 4.02
7742 15831 3.508402 GGAGGTTTATCCCGCAAGAAAAA 59.492 43.478 0.00 0.00 43.02 1.94
7743 15832 3.086282 GGAGGTTTATCCCGCAAGAAAA 58.914 45.455 0.00 0.00 43.02 2.29
7744 15833 2.040545 TGGAGGTTTATCCCGCAAGAAA 59.959 45.455 0.00 0.00 38.72 2.52
7745 15834 1.631388 TGGAGGTTTATCCCGCAAGAA 59.369 47.619 0.00 0.00 38.72 2.52
7746 15835 1.281419 TGGAGGTTTATCCCGCAAGA 58.719 50.000 0.00 0.00 38.72 3.02
7747 15836 2.122783 TTGGAGGTTTATCCCGCAAG 57.877 50.000 0.00 0.00 38.72 4.01
7748 15837 2.818751 ATTGGAGGTTTATCCCGCAA 57.181 45.000 0.00 0.00 38.72 4.85
7749 15838 2.818751 AATTGGAGGTTTATCCCGCA 57.181 45.000 0.00 0.00 38.72 5.69
7750 15839 5.300792 TGAATAAATTGGAGGTTTATCCCGC 59.699 40.000 0.00 0.00 38.72 6.13
7751 15840 6.952773 TGAATAAATTGGAGGTTTATCCCG 57.047 37.500 0.00 0.00 38.72 5.14
7752 15841 8.477419 TGATGAATAAATTGGAGGTTTATCCC 57.523 34.615 0.00 0.00 38.72 3.85
7756 15845 9.699410 ACAGATGATGAATAAATTGGAGGTTTA 57.301 29.630 0.00 0.00 0.00 2.01
7757 15846 8.599624 ACAGATGATGAATAAATTGGAGGTTT 57.400 30.769 0.00 0.00 0.00 3.27
7758 15847 7.012704 CGACAGATGATGAATAAATTGGAGGTT 59.987 37.037 0.00 0.00 0.00 3.50
7759 15848 6.484643 CGACAGATGATGAATAAATTGGAGGT 59.515 38.462 0.00 0.00 0.00 3.85
7760 15849 6.484643 ACGACAGATGATGAATAAATTGGAGG 59.515 38.462 0.00 0.00 0.00 4.30
7761 15850 7.350467 CACGACAGATGATGAATAAATTGGAG 58.650 38.462 0.00 0.00 0.00 3.86
7762 15851 6.260714 CCACGACAGATGATGAATAAATTGGA 59.739 38.462 0.00 0.00 0.00 3.53
7763 15852 6.260714 TCCACGACAGATGATGAATAAATTGG 59.739 38.462 0.00 0.00 0.00 3.16
7764 15853 7.250445 TCCACGACAGATGATGAATAAATTG 57.750 36.000 0.00 0.00 0.00 2.32
7765 15854 7.500227 ACATCCACGACAGATGATGAATAAATT 59.500 33.333 16.89 0.00 43.15 1.82
7766 15855 6.994496 ACATCCACGACAGATGATGAATAAAT 59.006 34.615 16.89 0.00 43.15 1.40
7767 15856 6.348498 ACATCCACGACAGATGATGAATAAA 58.652 36.000 16.89 0.00 43.15 1.40
7768 15857 5.917462 ACATCCACGACAGATGATGAATAA 58.083 37.500 16.89 0.00 43.15 1.40
7769 15858 5.509670 GGACATCCACGACAGATGATGAATA 60.510 44.000 16.89 0.00 43.15 1.75
7770 15859 4.375272 GACATCCACGACAGATGATGAAT 58.625 43.478 16.89 0.00 43.15 2.57
7771 15860 3.430790 GGACATCCACGACAGATGATGAA 60.431 47.826 16.89 0.00 43.15 2.57
7772 15861 2.101415 GGACATCCACGACAGATGATGA 59.899 50.000 16.89 0.00 43.15 2.92
7773 15862 2.477825 GGACATCCACGACAGATGATG 58.522 52.381 16.89 9.04 43.15 3.07
7774 15863 1.067669 CGGACATCCACGACAGATGAT 59.932 52.381 16.89 5.49 43.15 2.45
7775 15864 0.455815 CGGACATCCACGACAGATGA 59.544 55.000 16.89 0.00 43.15 2.92
7776 15865 0.528466 CCGGACATCCACGACAGATG 60.528 60.000 0.00 10.92 45.43 2.90
7777 15866 0.683179 TCCGGACATCCACGACAGAT 60.683 55.000 0.00 0.00 35.14 2.90
7778 15867 1.303806 TCCGGACATCCACGACAGA 60.304 57.895 0.00 0.00 35.14 3.41
7779 15868 1.139734 CTCCGGACATCCACGACAG 59.860 63.158 0.00 0.00 35.14 3.51
7780 15869 0.896479 TTCTCCGGACATCCACGACA 60.896 55.000 0.00 0.00 35.14 4.35
7781 15870 0.458025 GTTCTCCGGACATCCACGAC 60.458 60.000 0.00 0.00 35.14 4.34
7782 15871 0.896479 TGTTCTCCGGACATCCACGA 60.896 55.000 0.00 0.00 35.14 4.35
7783 15872 0.736325 GTGTTCTCCGGACATCCACG 60.736 60.000 0.00 0.00 35.14 4.94
7784 15873 0.391263 GGTGTTCTCCGGACATCCAC 60.391 60.000 0.00 5.13 35.14 4.02
7785 15874 0.834261 TGGTGTTCTCCGGACATCCA 60.834 55.000 0.00 6.05 35.14 3.41
7786 15875 0.108138 CTGGTGTTCTCCGGACATCC 60.108 60.000 0.00 3.40 36.02 3.51
7787 15876 0.895530 TCTGGTGTTCTCCGGACATC 59.104 55.000 0.00 0.00 37.88 3.06
7788 15877 1.276421 CTTCTGGTGTTCTCCGGACAT 59.724 52.381 0.00 0.00 41.89 3.06
7789 15878 0.679505 CTTCTGGTGTTCTCCGGACA 59.320 55.000 0.00 0.00 41.89 4.02
7790 15879 0.680061 ACTTCTGGTGTTCTCCGGAC 59.320 55.000 0.00 0.00 41.89 4.79
7791 15880 2.297698 TACTTCTGGTGTTCTCCGGA 57.702 50.000 2.93 2.93 40.65 5.14
7792 15881 2.036733 TGTTACTTCTGGTGTTCTCCGG 59.963 50.000 0.00 0.00 35.33 5.14
7793 15882 3.380479 TGTTACTTCTGGTGTTCTCCG 57.620 47.619 0.00 0.00 0.00 4.63
7794 15883 6.445357 TTTTTGTTACTTCTGGTGTTCTCC 57.555 37.500 0.00 0.00 0.00 3.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.