Multiple sequence alignment - TraesCS2A01G014100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G014100 chr2A 100.000 2681 0 0 1 2681 5671666 5674346 0.000000e+00 4951
1 TraesCS2A01G014100 chr2A 79.822 1239 191 47 822 2039 62715683 62716883 0.000000e+00 848
2 TraesCS2A01G014100 chr2A 94.863 292 15 0 2390 2681 62717589 62717880 8.750000e-125 457
3 TraesCS2A01G014100 chr2A 92.718 206 12 3 2161 2366 62717095 62717297 7.260000e-76 294
4 TraesCS2A01G014100 chr2B 89.127 699 68 4 1 693 594339402 594340098 0.000000e+00 863
5 TraesCS2A01G014100 chr2B 79.896 383 51 16 1702 2077 1967594 1967231 9.520000e-65 257
6 TraesCS2A01G014100 chr7D 88.953 697 67 8 1 693 72944256 72943566 0.000000e+00 852
7 TraesCS2A01G014100 chr7D 88.873 692 72 5 1 690 41151708 41152396 0.000000e+00 846
8 TraesCS2A01G014100 chr7D 87.697 699 77 6 1 693 216611973 216611278 0.000000e+00 806
9 TraesCS2A01G014100 chr4A 88.889 702 65 6 1 693 75434004 75433307 0.000000e+00 852
10 TraesCS2A01G014100 chrUn 88.714 700 70 4 1 693 17583401 17584098 0.000000e+00 846
11 TraesCS2A01G014100 chr4B 88.478 703 68 6 1 693 177828949 177829648 0.000000e+00 837
12 TraesCS2A01G014100 chr4B 87.464 702 77 5 1 693 541158770 541158071 0.000000e+00 798
13 TraesCS2A01G014100 chr1B 88.235 697 75 7 1 693 120048116 120047423 0.000000e+00 826


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G014100 chr2A 5671666 5674346 2680 False 4951 4951 100.000000 1 2681 1 chr2A.!!$F1 2680
1 TraesCS2A01G014100 chr2A 62715683 62717880 2197 False 533 848 89.134333 822 2681 3 chr2A.!!$F2 1859
2 TraesCS2A01G014100 chr2B 594339402 594340098 696 False 863 863 89.127000 1 693 1 chr2B.!!$F1 692
3 TraesCS2A01G014100 chr7D 72943566 72944256 690 True 852 852 88.953000 1 693 1 chr7D.!!$R1 692
4 TraesCS2A01G014100 chr7D 41151708 41152396 688 False 846 846 88.873000 1 690 1 chr7D.!!$F1 689
5 TraesCS2A01G014100 chr7D 216611278 216611973 695 True 806 806 87.697000 1 693 1 chr7D.!!$R2 692
6 TraesCS2A01G014100 chr4A 75433307 75434004 697 True 852 852 88.889000 1 693 1 chr4A.!!$R1 692
7 TraesCS2A01G014100 chrUn 17583401 17584098 697 False 846 846 88.714000 1 693 1 chrUn.!!$F1 692
8 TraesCS2A01G014100 chr4B 177828949 177829648 699 False 837 837 88.478000 1 693 1 chr4B.!!$F1 692
9 TraesCS2A01G014100 chr4B 541158071 541158770 699 True 798 798 87.464000 1 693 1 chr4B.!!$R1 692
10 TraesCS2A01G014100 chr1B 120047423 120048116 693 True 826 826 88.235000 1 693 1 chr1B.!!$R1 692

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
757 779 0.03438 GTTCAGGGGGTTAAGGGAGC 60.034 60.0 0.0 0.0 0.0 4.7 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1914 1978 0.109412 GCTGCCAATCACTGTTGCTC 60.109 55.0 0.0 0.0 0.0 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 8.561738 AATTCCACAGTAATTAGTACAACCTG 57.438 34.615 0.00 0.00 34.88 4.00
30 31 6.921486 TCCACAGTAATTAGTACAACCTGA 57.079 37.500 0.00 0.00 34.88 3.86
35 36 8.999431 CACAGTAATTAGTACAACCTGAAACAT 58.001 33.333 0.00 0.00 34.88 2.71
56 59 6.899089 ACATTCCCCTTGTTTTTGAAGATTT 58.101 32.000 0.00 0.00 0.00 2.17
77 80 7.949006 AGATTTGTACTAATATACCCCGTCTCT 59.051 37.037 2.41 0.00 0.00 3.10
89 92 1.269309 CCCGTCTCTATTCTTCTGGCG 60.269 57.143 0.00 0.00 0.00 5.69
128 131 8.510243 AAAAATGAGATTGAAAAGCTTGGTTT 57.490 26.923 0.00 0.00 41.66 3.27
176 179 1.279496 CTCTCCACACCTCAATGGGA 58.721 55.000 0.00 0.00 41.11 4.37
238 255 0.901124 CTTGACCTCAGACTCCTGGG 59.099 60.000 0.00 0.00 40.63 4.45
254 271 2.409651 GGTTCGCCGCACAAAACA 59.590 55.556 0.00 0.00 0.00 2.83
270 287 4.870426 ACAAAACACCTGCTAGTATCATCG 59.130 41.667 0.00 0.00 0.00 3.84
278 295 4.279671 CCTGCTAGTATCATCGAAGGAGTT 59.720 45.833 0.00 0.00 0.00 3.01
320 337 4.789807 CTCTCATTCTCCCCATTGAACAT 58.210 43.478 0.00 0.00 0.00 2.71
409 427 3.256631 GTCCTTGATGCATTTGACTTGGT 59.743 43.478 0.00 0.00 0.00 3.67
420 438 1.518367 TGACTTGGTCAACCTCCCTT 58.482 50.000 0.10 0.00 39.78 3.95
438 460 2.100584 CCTTGTCTTCCTCTCTCGGATG 59.899 54.545 0.00 0.00 32.02 3.51
485 507 2.036733 CACCTTCCTTCGTGTCTAACCA 59.963 50.000 0.00 0.00 0.00 3.67
507 529 3.116939 ACTGGTAGAGGTCCTCATATGCT 60.117 47.826 21.26 1.44 32.06 3.79
521 543 1.491668 TATGCTCGACCCCTTGCTTA 58.508 50.000 0.00 0.00 0.00 3.09
534 556 3.126831 CCTTGCTTAACTCATAGCTCGG 58.873 50.000 0.00 0.00 38.22 4.63
536 558 3.438297 TGCTTAACTCATAGCTCGGTC 57.562 47.619 0.00 0.00 38.22 4.79
541 563 0.748367 ACTCATAGCTCGGTCTGCGA 60.748 55.000 0.00 0.00 35.28 5.10
574 596 6.813649 TGACATCTTGTACTTCTCTATGTTGC 59.186 38.462 0.00 0.00 0.00 4.17
607 629 3.869065 TCCAGGTATAGGCGTTTGAAAG 58.131 45.455 0.00 0.00 0.00 2.62
693 715 3.578716 CTCTTCTACTTCCCTTGGACACA 59.421 47.826 0.00 0.00 0.00 3.72
694 716 3.971305 TCTTCTACTTCCCTTGGACACAA 59.029 43.478 0.00 0.00 34.87 3.33
695 717 4.410883 TCTTCTACTTCCCTTGGACACAAA 59.589 41.667 0.00 0.00 35.89 2.83
696 718 4.993705 TCTACTTCCCTTGGACACAAAT 57.006 40.909 0.00 0.00 35.89 2.32
697 719 4.651778 TCTACTTCCCTTGGACACAAATG 58.348 43.478 0.00 0.00 35.89 2.32
698 720 3.593442 ACTTCCCTTGGACACAAATGA 57.407 42.857 0.00 0.00 35.89 2.57
699 721 3.490348 ACTTCCCTTGGACACAAATGAG 58.510 45.455 0.00 0.00 35.89 2.90
700 722 1.909700 TCCCTTGGACACAAATGAGC 58.090 50.000 0.00 0.00 35.89 4.26
701 723 1.144708 TCCCTTGGACACAAATGAGCA 59.855 47.619 0.00 0.00 35.89 4.26
702 724 1.962807 CCCTTGGACACAAATGAGCAA 59.037 47.619 0.00 0.00 35.89 3.91
703 725 2.364970 CCCTTGGACACAAATGAGCAAA 59.635 45.455 0.00 0.00 35.89 3.68
704 726 3.383761 CCTTGGACACAAATGAGCAAAC 58.616 45.455 0.00 0.00 35.89 2.93
705 727 3.068590 CCTTGGACACAAATGAGCAAACT 59.931 43.478 0.00 0.00 35.89 2.66
706 728 3.988379 TGGACACAAATGAGCAAACTC 57.012 42.857 0.00 0.00 43.76 3.01
707 729 4.202040 CTTGGACACAAATGAGCAAACTCA 60.202 41.667 0.00 0.00 43.54 3.41
708 730 6.239491 CTTGGACACAAATGAGCAAACTCAC 61.239 44.000 0.00 0.00 42.86 3.51
719 741 5.438761 GAGCAAACTCACCTAACACAATT 57.561 39.130 0.00 0.00 42.93 2.32
720 742 5.831997 GAGCAAACTCACCTAACACAATTT 58.168 37.500 0.00 0.00 42.93 1.82
721 743 6.952773 AGCAAACTCACCTAACACAATTTA 57.047 33.333 0.00 0.00 0.00 1.40
722 744 7.524717 AGCAAACTCACCTAACACAATTTAT 57.475 32.000 0.00 0.00 0.00 1.40
723 745 7.370383 AGCAAACTCACCTAACACAATTTATG 58.630 34.615 0.00 0.00 0.00 1.90
724 746 7.230510 AGCAAACTCACCTAACACAATTTATGA 59.769 33.333 0.00 0.00 0.00 2.15
725 747 7.538678 GCAAACTCACCTAACACAATTTATGAG 59.461 37.037 0.00 0.00 38.60 2.90
726 748 8.567948 CAAACTCACCTAACACAATTTATGAGT 58.432 33.333 0.00 0.00 45.59 3.41
727 749 7.672983 ACTCACCTAACACAATTTATGAGTG 57.327 36.000 2.92 0.00 42.88 3.51
728 750 6.655003 ACTCACCTAACACAATTTATGAGTGG 59.345 38.462 2.92 0.00 42.88 4.00
729 751 6.539173 TCACCTAACACAATTTATGAGTGGT 58.461 36.000 0.00 0.00 37.58 4.16
730 752 7.681679 TCACCTAACACAATTTATGAGTGGTA 58.318 34.615 0.00 0.00 37.58 3.25
731 753 8.325787 TCACCTAACACAATTTATGAGTGGTAT 58.674 33.333 0.00 0.00 35.16 2.73
732 754 8.956426 CACCTAACACAATTTATGAGTGGTATT 58.044 33.333 0.00 0.00 35.16 1.89
733 755 8.956426 ACCTAACACAATTTATGAGTGGTATTG 58.044 33.333 0.00 0.00 35.16 1.90
734 756 8.405531 CCTAACACAATTTATGAGTGGTATTGG 58.594 37.037 0.00 0.00 35.16 3.16
735 757 9.173021 CTAACACAATTTATGAGTGGTATTGGA 57.827 33.333 0.00 0.00 35.16 3.53
736 758 8.593945 AACACAATTTATGAGTGGTATTGGAT 57.406 30.769 0.00 0.00 37.58 3.41
737 759 9.693739 AACACAATTTATGAGTGGTATTGGATA 57.306 29.630 0.00 0.00 37.58 2.59
738 760 9.342308 ACACAATTTATGAGTGGTATTGGATAG 57.658 33.333 0.00 0.00 37.58 2.08
739 761 9.342308 CACAATTTATGAGTGGTATTGGATAGT 57.658 33.333 0.00 0.00 32.04 2.12
740 762 9.920946 ACAATTTATGAGTGGTATTGGATAGTT 57.079 29.630 0.00 0.00 32.04 2.24
743 765 9.784531 ATTTATGAGTGGTATTGGATAGTTCAG 57.215 33.333 0.00 0.00 0.00 3.02
744 766 5.614324 TGAGTGGTATTGGATAGTTCAGG 57.386 43.478 0.00 0.00 0.00 3.86
745 767 4.408921 TGAGTGGTATTGGATAGTTCAGGG 59.591 45.833 0.00 0.00 0.00 4.45
746 768 3.716872 AGTGGTATTGGATAGTTCAGGGG 59.283 47.826 0.00 0.00 0.00 4.79
747 769 3.053077 TGGTATTGGATAGTTCAGGGGG 58.947 50.000 0.00 0.00 0.00 5.40
748 770 3.053826 GGTATTGGATAGTTCAGGGGGT 58.946 50.000 0.00 0.00 0.00 4.95
749 771 3.462205 GGTATTGGATAGTTCAGGGGGTT 59.538 47.826 0.00 0.00 0.00 4.11
750 772 4.661709 GGTATTGGATAGTTCAGGGGGTTA 59.338 45.833 0.00 0.00 0.00 2.85
751 773 5.133153 GGTATTGGATAGTTCAGGGGGTTAA 59.867 44.000 0.00 0.00 0.00 2.01
752 774 4.855298 TTGGATAGTTCAGGGGGTTAAG 57.145 45.455 0.00 0.00 0.00 1.85
753 775 3.120108 TGGATAGTTCAGGGGGTTAAGG 58.880 50.000 0.00 0.00 0.00 2.69
754 776 2.442126 GGATAGTTCAGGGGGTTAAGGG 59.558 54.545 0.00 0.00 0.00 3.95
755 777 3.390819 GATAGTTCAGGGGGTTAAGGGA 58.609 50.000 0.00 0.00 0.00 4.20
756 778 1.670059 AGTTCAGGGGGTTAAGGGAG 58.330 55.000 0.00 0.00 0.00 4.30
757 779 0.034380 GTTCAGGGGGTTAAGGGAGC 60.034 60.000 0.00 0.00 0.00 4.70
758 780 0.476808 TTCAGGGGGTTAAGGGAGCA 60.477 55.000 0.00 0.00 0.00 4.26
759 781 0.476808 TCAGGGGGTTAAGGGAGCAA 60.477 55.000 0.00 0.00 0.00 3.91
760 782 0.407918 CAGGGGGTTAAGGGAGCAAA 59.592 55.000 0.00 0.00 0.00 3.68
761 783 1.163408 AGGGGGTTAAGGGAGCAAAA 58.837 50.000 0.00 0.00 0.00 2.44
762 784 1.505977 AGGGGGTTAAGGGAGCAAAAA 59.494 47.619 0.00 0.00 0.00 1.94
786 808 9.443323 AAAAGTAATTAATGGGGTTATGCAAAC 57.557 29.630 0.00 0.00 0.00 2.93
787 809 7.119709 AGTAATTAATGGGGTTATGCAAACC 57.880 36.000 17.47 17.47 41.25 3.27
788 810 6.670027 AGTAATTAATGGGGTTATGCAAACCA 59.330 34.615 23.39 14.06 44.10 3.67
789 811 5.612725 ATTAATGGGGTTATGCAAACCAG 57.387 39.130 23.39 0.00 44.10 4.00
790 812 1.194218 ATGGGGTTATGCAAACCAGC 58.806 50.000 23.39 12.54 44.10 4.85
791 813 0.902516 TGGGGTTATGCAAACCAGCC 60.903 55.000 23.39 18.43 44.10 4.85
792 814 0.902516 GGGGTTATGCAAACCAGCCA 60.903 55.000 23.39 0.00 44.10 4.75
793 815 0.246360 GGGTTATGCAAACCAGCCAC 59.754 55.000 23.39 9.31 41.64 5.01
794 816 1.256812 GGTTATGCAAACCAGCCACT 58.743 50.000 19.59 0.00 40.03 4.00
795 817 1.618343 GGTTATGCAAACCAGCCACTT 59.382 47.619 19.59 0.00 40.03 3.16
796 818 2.037121 GGTTATGCAAACCAGCCACTTT 59.963 45.455 19.59 0.00 40.03 2.66
797 819 3.059166 GTTATGCAAACCAGCCACTTTG 58.941 45.455 0.00 0.00 0.00 2.77
798 820 1.122227 ATGCAAACCAGCCACTTTGT 58.878 45.000 0.00 0.00 31.20 2.83
799 821 0.901124 TGCAAACCAGCCACTTTGTT 59.099 45.000 0.00 0.00 31.20 2.83
800 822 1.134848 TGCAAACCAGCCACTTTGTTC 60.135 47.619 0.00 0.00 31.20 3.18
801 823 1.134848 GCAAACCAGCCACTTTGTTCA 60.135 47.619 0.00 0.00 31.20 3.18
802 824 2.676463 GCAAACCAGCCACTTTGTTCAA 60.676 45.455 0.00 0.00 31.20 2.69
803 825 3.189285 CAAACCAGCCACTTTGTTCAAG 58.811 45.455 0.00 0.00 38.64 3.02
804 826 1.402787 ACCAGCCACTTTGTTCAAGG 58.597 50.000 0.00 0.00 36.72 3.61
805 827 0.675633 CCAGCCACTTTGTTCAAGGG 59.324 55.000 0.29 0.00 36.72 3.95
806 828 1.691196 CAGCCACTTTGTTCAAGGGA 58.309 50.000 0.29 0.00 38.32 4.20
807 829 1.610522 CAGCCACTTTGTTCAAGGGAG 59.389 52.381 0.29 0.00 38.32 4.30
808 830 1.215423 AGCCACTTTGTTCAAGGGAGT 59.785 47.619 0.29 0.00 38.32 3.85
809 831 2.031870 GCCACTTTGTTCAAGGGAGTT 58.968 47.619 0.29 0.00 38.32 3.01
810 832 3.117663 AGCCACTTTGTTCAAGGGAGTTA 60.118 43.478 0.29 0.00 38.32 2.24
811 833 3.634910 GCCACTTTGTTCAAGGGAGTTAA 59.365 43.478 0.29 0.00 38.32 2.01
812 834 4.098807 GCCACTTTGTTCAAGGGAGTTAAA 59.901 41.667 0.29 0.00 38.32 1.52
813 835 5.221441 GCCACTTTGTTCAAGGGAGTTAAAT 60.221 40.000 0.29 0.00 38.32 1.40
814 836 6.215845 CCACTTTGTTCAAGGGAGTTAAATG 58.784 40.000 0.29 0.00 38.32 2.32
815 837 6.215845 CACTTTGTTCAAGGGAGTTAAATGG 58.784 40.000 0.29 0.00 38.32 3.16
816 838 6.040391 CACTTTGTTCAAGGGAGTTAAATGGA 59.960 38.462 0.29 0.00 38.32 3.41
817 839 6.040504 ACTTTGTTCAAGGGAGTTAAATGGAC 59.959 38.462 0.29 0.00 36.72 4.02
818 840 5.319043 TGTTCAAGGGAGTTAAATGGACT 57.681 39.130 0.00 0.00 0.00 3.85
819 841 5.701224 TGTTCAAGGGAGTTAAATGGACTT 58.299 37.500 0.00 0.00 0.00 3.01
820 842 5.768164 TGTTCAAGGGAGTTAAATGGACTTC 59.232 40.000 0.00 0.00 0.00 3.01
821 843 5.843019 TCAAGGGAGTTAAATGGACTTCT 57.157 39.130 0.00 0.00 0.00 2.85
822 844 6.200878 TCAAGGGAGTTAAATGGACTTCTT 57.799 37.500 0.00 0.00 0.00 2.52
823 845 6.610830 TCAAGGGAGTTAAATGGACTTCTTT 58.389 36.000 0.00 0.00 0.00 2.52
824 846 7.066781 TCAAGGGAGTTAAATGGACTTCTTTT 58.933 34.615 0.00 0.00 0.00 2.27
825 847 7.230712 TCAAGGGAGTTAAATGGACTTCTTTTC 59.769 37.037 0.00 0.00 0.00 2.29
826 848 6.610830 AGGGAGTTAAATGGACTTCTTTTCA 58.389 36.000 0.00 0.00 0.00 2.69
827 849 7.241628 AGGGAGTTAAATGGACTTCTTTTCAT 58.758 34.615 0.00 0.00 0.00 2.57
828 850 7.730332 AGGGAGTTAAATGGACTTCTTTTCATT 59.270 33.333 0.00 0.00 0.00 2.57
829 851 8.367911 GGGAGTTAAATGGACTTCTTTTCATTT 58.632 33.333 0.00 0.00 41.11 2.32
935 957 6.801539 TCTTTTCTCATAGTGTGCGATTTT 57.198 33.333 0.00 0.00 0.00 1.82
936 958 6.831769 TCTTTTCTCATAGTGTGCGATTTTC 58.168 36.000 0.00 0.00 0.00 2.29
937 959 6.650807 TCTTTTCTCATAGTGTGCGATTTTCT 59.349 34.615 0.00 0.00 0.00 2.52
938 960 6.801539 TTTCTCATAGTGTGCGATTTTCTT 57.198 33.333 0.00 0.00 0.00 2.52
939 961 6.801539 TTCTCATAGTGTGCGATTTTCTTT 57.198 33.333 0.00 0.00 0.00 2.52
940 962 6.801539 TCTCATAGTGTGCGATTTTCTTTT 57.198 33.333 0.00 0.00 0.00 2.27
941 963 6.831769 TCTCATAGTGTGCGATTTTCTTTTC 58.168 36.000 0.00 0.00 0.00 2.29
942 964 5.938322 TCATAGTGTGCGATTTTCTTTTCC 58.062 37.500 0.00 0.00 0.00 3.13
943 965 5.705441 TCATAGTGTGCGATTTTCTTTTCCT 59.295 36.000 0.00 0.00 0.00 3.36
944 966 4.918810 AGTGTGCGATTTTCTTTTCCTT 57.081 36.364 0.00 0.00 0.00 3.36
945 967 7.389330 TCATAGTGTGCGATTTTCTTTTCCTTA 59.611 33.333 0.00 0.00 0.00 2.69
946 968 5.758924 AGTGTGCGATTTTCTTTTCCTTAC 58.241 37.500 0.00 0.00 0.00 2.34
957 979 3.815401 TCTTTTCCTTACTCTTGCAGCAC 59.185 43.478 0.00 0.00 0.00 4.40
973 995 1.623811 AGCACTGTCCGGTATTTCAGT 59.376 47.619 0.00 7.21 41.02 3.41
978 1000 4.625742 CACTGTCCGGTATTTCAGTTACAG 59.374 45.833 0.00 6.19 38.79 2.74
984 1006 7.093640 TGTCCGGTATTTCAGTTACAGTTAGAT 60.094 37.037 0.00 0.00 0.00 1.98
987 1009 7.926555 CCGGTATTTCAGTTACAGTTAGATGAT 59.073 37.037 0.00 0.00 0.00 2.45
1003 1025 9.544579 AGTTAGATGATGATCCTGAGATTATGA 57.455 33.333 0.00 0.00 29.30 2.15
1005 1027 7.793948 AGATGATGATCCTGAGATTATGACA 57.206 36.000 0.00 0.00 29.30 3.58
1026 1048 7.669427 TGACACAAAATTATCAGGATTTGCTT 58.331 30.769 0.00 0.00 36.48 3.91
1027 1049 8.801299 TGACACAAAATTATCAGGATTTGCTTA 58.199 29.630 0.00 0.00 36.48 3.09
1028 1050 8.986477 ACACAAAATTATCAGGATTTGCTTAC 57.014 30.769 0.00 0.00 36.48 2.34
1030 1052 8.253113 CACAAAATTATCAGGATTTGCTTACCT 58.747 33.333 0.00 0.00 36.48 3.08
1031 1053 8.815912 ACAAAATTATCAGGATTTGCTTACCTT 58.184 29.630 0.00 0.00 36.48 3.50
1044 1066 9.516314 GATTTGCTTACCTTAATTACCAATCAC 57.484 33.333 0.00 0.00 0.00 3.06
1049 1071 8.129211 GCTTACCTTAATTACCAATCACATCAC 58.871 37.037 0.00 0.00 0.00 3.06
1053 1075 7.121168 ACCTTAATTACCAATCACATCACACAG 59.879 37.037 0.00 0.00 0.00 3.66
1062 1084 2.815503 TCACATCACACAGATTTGGCAG 59.184 45.455 0.00 0.00 35.57 4.85
1065 1087 4.082408 CACATCACACAGATTTGGCAGAAT 60.082 41.667 0.00 0.00 33.72 2.40
1071 1093 5.014858 ACACAGATTTGGCAGAATCTTCAT 58.985 37.500 16.88 7.78 42.24 2.57
1096 1118 7.651027 ATTGAAGGAAATGGTCTTATTGAGG 57.349 36.000 0.00 0.00 0.00 3.86
1104 1126 5.779241 ATGGTCTTATTGAGGAGGTTCAA 57.221 39.130 0.00 0.00 41.00 2.69
1113 1135 2.306847 GAGGAGGTTCAAACTTTGCCA 58.693 47.619 0.00 0.00 0.00 4.92
1130 1152 1.595093 CCAAAAGGCGCGGGATTCTT 61.595 55.000 8.83 0.34 0.00 2.52
1132 1154 1.470890 CAAAAGGCGCGGGATTCTTTA 59.529 47.619 8.83 0.00 0.00 1.85
1134 1156 2.922740 AAGGCGCGGGATTCTTTATA 57.077 45.000 8.83 0.00 0.00 0.98
1146 1168 7.327032 GCGGGATTCTTTATAATTGAATTGCTC 59.673 37.037 0.00 4.68 31.49 4.26
1152 1174 6.542005 TCTTTATAATTGAATTGCTCGCTCCA 59.458 34.615 0.00 0.00 0.00 3.86
1153 1175 2.927553 AATTGAATTGCTCGCTCCAC 57.072 45.000 0.00 0.00 0.00 4.02
1155 1177 1.896220 TTGAATTGCTCGCTCCACTT 58.104 45.000 0.00 0.00 0.00 3.16
1162 1184 0.246635 GCTCGCTCCACTTAGTTGGA 59.753 55.000 4.12 4.12 43.83 3.53
1167 1189 3.007506 TCGCTCCACTTAGTTGGATTCAA 59.992 43.478 4.51 0.00 44.97 2.69
1174 1196 8.737168 TCCACTTAGTTGGATTCAAGATAATG 57.263 34.615 0.00 0.00 41.00 1.90
1175 1197 8.548025 TCCACTTAGTTGGATTCAAGATAATGA 58.452 33.333 0.00 0.00 41.00 2.57
1179 1201 9.347240 CTTAGTTGGATTCAAGATAATGATGGT 57.653 33.333 0.00 0.00 32.92 3.55
1227 1249 9.598517 TTTGATAATCTTTATTGCATTGGGTTC 57.401 29.630 0.00 0.00 0.00 3.62
1228 1250 8.537728 TGATAATCTTTATTGCATTGGGTTCT 57.462 30.769 0.00 0.00 0.00 3.01
1229 1251 8.980596 TGATAATCTTTATTGCATTGGGTTCTT 58.019 29.630 0.00 0.00 0.00 2.52
1238 1260 6.662865 TTGCATTGGGTTCTTTAGAAATGA 57.337 33.333 6.22 0.00 35.58 2.57
1239 1261 6.662865 TGCATTGGGTTCTTTAGAAATGAA 57.337 33.333 6.22 0.00 35.58 2.57
1247 1269 8.490311 TGGGTTCTTTAGAAATGAAAATTGGTT 58.510 29.630 0.00 0.00 35.58 3.67
1288 1310 5.605534 ACAAGGATATGAAGGATGTTCTCG 58.394 41.667 0.00 0.00 0.00 4.04
1289 1311 5.363868 ACAAGGATATGAAGGATGTTCTCGA 59.636 40.000 0.00 0.00 0.00 4.04
1291 1313 6.095432 AGGATATGAAGGATGTTCTCGAAG 57.905 41.667 0.00 0.00 0.00 3.79
1298 1320 5.422331 TGAAGGATGTTCTCGAAGGAACTAT 59.578 40.000 15.91 9.41 44.02 2.12
1299 1321 6.605995 TGAAGGATGTTCTCGAAGGAACTATA 59.394 38.462 15.91 0.32 44.02 1.31
1301 1323 5.010213 AGGATGTTCTCGAAGGAACTATAGC 59.990 44.000 15.91 2.36 44.02 2.97
1304 1326 4.035324 TGTTCTCGAAGGAACTATAGCGAG 59.965 45.833 15.91 15.10 44.02 5.03
1313 1335 5.310451 AGGAACTATAGCGAGACCTCTTAG 58.690 45.833 0.00 0.00 36.02 2.18
1329 1351 5.763698 ACCTCTTAGTTTTTCTGGCAACTAC 59.236 40.000 0.00 0.00 35.63 2.73
1339 1361 6.761099 TTTCTGGCAACTACAACAAGTTAA 57.239 33.333 0.00 0.00 37.61 2.01
1340 1362 6.761099 TTCTGGCAACTACAACAAGTTAAA 57.239 33.333 0.00 0.00 37.61 1.52
1351 1374 4.578928 ACAACAAGTTAAATGCCGACTTCT 59.421 37.500 0.00 0.00 31.63 2.85
1352 1375 5.067283 ACAACAAGTTAAATGCCGACTTCTT 59.933 36.000 0.00 0.00 31.63 2.52
1363 1386 2.352960 GCCGACTTCTTCAACATCCATC 59.647 50.000 0.00 0.00 0.00 3.51
1369 1392 4.164988 ACTTCTTCAACATCCATCTAGGGG 59.835 45.833 0.00 0.00 38.24 4.79
1374 1397 3.455910 TCAACATCCATCTAGGGGTTCAG 59.544 47.826 0.00 0.00 38.24 3.02
1387 1410 1.625818 GGGTTCAGGCTCTCTTTCAGA 59.374 52.381 0.00 0.00 0.00 3.27
1397 1420 4.693095 GGCTCTCTTTCAGACTTACAAAGG 59.307 45.833 0.00 0.00 0.00 3.11
1399 1422 5.992217 GCTCTCTTTCAGACTTACAAAGGAA 59.008 40.000 0.00 0.00 0.00 3.36
1413 1436 5.717119 ACAAAGGAATAGCAGGTTATCCT 57.283 39.130 1.04 1.04 46.37 3.24
1430 1453 0.995024 CCTGGGTCCCTCATCAAAGT 59.005 55.000 10.00 0.00 0.00 2.66
1434 1457 1.636003 GGGTCCCTCATCAAAGTTCCT 59.364 52.381 0.00 0.00 0.00 3.36
1435 1458 2.356227 GGGTCCCTCATCAAAGTTCCTC 60.356 54.545 0.00 0.00 0.00 3.71
1437 1460 3.775316 GGTCCCTCATCAAAGTTCCTCTA 59.225 47.826 0.00 0.00 0.00 2.43
1438 1461 4.410555 GGTCCCTCATCAAAGTTCCTCTAT 59.589 45.833 0.00 0.00 0.00 1.98
1449 1472 3.851098 AGTTCCTCTATTGACGAGTTGC 58.149 45.455 0.00 0.00 0.00 4.17
1450 1473 3.258372 AGTTCCTCTATTGACGAGTTGCA 59.742 43.478 0.00 0.00 0.00 4.08
1458 1481 6.170506 TCTATTGACGAGTTGCATTACCTTT 58.829 36.000 0.00 0.00 0.00 3.11
1465 1488 4.670221 CGAGTTGCATTACCTTTTCAGAGC 60.670 45.833 0.00 0.00 0.00 4.09
1479 1502 5.762179 TTTCAGAGCCTCTTAGATTTCCA 57.238 39.130 0.00 0.00 0.00 3.53
1481 1504 3.133721 TCAGAGCCTCTTAGATTTCCAGC 59.866 47.826 0.00 0.00 0.00 4.85
1498 1521 3.056179 TCCAGCATTTCGTCAGTACATGA 60.056 43.478 0.00 0.00 34.79 3.07
1500 1523 4.025396 CCAGCATTTCGTCAGTACATGATC 60.025 45.833 0.00 0.00 40.92 2.92
1505 1528 3.866883 TCGTCAGTACATGATCAGCAA 57.133 42.857 0.00 0.00 40.92 3.91
1512 1535 5.063817 TCAGTACATGATCAGCAAAATGTCG 59.936 40.000 0.00 0.00 35.07 4.35
1513 1536 5.063817 CAGTACATGATCAGCAAAATGTCGA 59.936 40.000 0.00 0.00 35.07 4.20
1515 1538 3.181517 ACATGATCAGCAAAATGTCGACG 60.182 43.478 11.62 0.00 0.00 5.12
1519 1542 3.989705 TCAGCAAAATGTCGACGTATG 57.010 42.857 11.40 13.98 0.00 2.39
1527 1550 4.920640 AATGTCGACGTATGATTCTCCT 57.079 40.909 11.40 0.00 0.00 3.69
1541 1564 3.914426 TTCTCCTCCAGGAAGCATTAC 57.086 47.619 0.00 0.00 44.91 1.89
1550 1573 3.127030 CCAGGAAGCATTACGGAGTTTTC 59.873 47.826 0.00 0.00 37.78 2.29
1552 1575 5.175859 CAGGAAGCATTACGGAGTTTTCTA 58.824 41.667 0.00 0.00 37.78 2.10
1553 1576 5.817816 CAGGAAGCATTACGGAGTTTTCTAT 59.182 40.000 0.00 0.00 37.78 1.98
1592 1615 9.566530 TTGGTCAAATTATTGTGACATTATTCG 57.433 29.630 16.08 0.00 44.89 3.34
1594 1617 9.009327 GGTCAAATTATTGTGACATTATTCGTG 57.991 33.333 16.08 0.00 44.89 4.35
1602 1625 3.063997 GTGACATTATTCGTGAAGGCAGG 59.936 47.826 0.00 0.00 0.00 4.85
1611 1634 1.228245 TGAAGGCAGGGCACAGTTC 60.228 57.895 0.00 0.00 0.00 3.01
1613 1636 2.731691 GAAGGCAGGGCACAGTTCGA 62.732 60.000 0.00 0.00 0.00 3.71
1616 1639 2.109126 GCAGGGCACAGTTCGATCC 61.109 63.158 0.00 0.00 0.00 3.36
1617 1640 1.599047 CAGGGCACAGTTCGATCCT 59.401 57.895 0.00 0.00 0.00 3.24
1618 1641 0.460987 CAGGGCACAGTTCGATCCTC 60.461 60.000 0.00 0.00 0.00 3.71
1619 1642 0.616111 AGGGCACAGTTCGATCCTCT 60.616 55.000 0.00 0.00 0.00 3.69
1620 1643 0.250513 GGGCACAGTTCGATCCTCTT 59.749 55.000 0.00 0.00 0.00 2.85
1621 1644 1.480954 GGGCACAGTTCGATCCTCTTA 59.519 52.381 0.00 0.00 0.00 2.10
1622 1645 2.093658 GGGCACAGTTCGATCCTCTTAA 60.094 50.000 0.00 0.00 0.00 1.85
1626 1649 3.243877 CACAGTTCGATCCTCTTAATGCG 59.756 47.826 0.00 0.00 0.00 4.73
1632 1655 2.286418 CGATCCTCTTAATGCGTTTGGC 60.286 50.000 0.00 0.00 43.96 4.52
1658 1681 9.740239 CATACAAAGTTATGATGATCTTTTGGG 57.260 33.333 0.00 0.00 0.00 4.12
1659 1682 6.633856 ACAAAGTTATGATGATCTTTTGGGC 58.366 36.000 0.00 0.00 0.00 5.36
1693 1716 5.664457 TGATACTGTAGCTGACAAGAATGG 58.336 41.667 4.58 0.00 37.70 3.16
1696 1719 4.511527 ACTGTAGCTGACAAGAATGGATG 58.488 43.478 0.00 0.00 37.70 3.51
1712 1774 2.368439 GGATGCACTCCATTAGTTGCA 58.632 47.619 9.50 0.00 44.26 4.08
1713 1775 2.954318 GGATGCACTCCATTAGTTGCAT 59.046 45.455 7.60 7.60 46.44 3.96
1714 1776 3.382546 GGATGCACTCCATTAGTTGCATT 59.617 43.478 9.14 0.00 45.13 3.56
1715 1777 4.580167 GGATGCACTCCATTAGTTGCATTA 59.420 41.667 9.14 0.00 45.13 1.90
1716 1778 5.242393 GGATGCACTCCATTAGTTGCATTAT 59.758 40.000 9.14 0.00 45.13 1.28
1717 1779 6.239120 GGATGCACTCCATTAGTTGCATTATT 60.239 38.462 9.14 0.00 45.13 1.40
1718 1780 6.528537 TGCACTCCATTAGTTGCATTATTT 57.471 33.333 0.00 0.00 37.34 1.40
1719 1781 7.637631 TGCACTCCATTAGTTGCATTATTTA 57.362 32.000 0.00 0.00 37.34 1.40
1720 1782 8.236585 TGCACTCCATTAGTTGCATTATTTAT 57.763 30.769 0.00 0.00 37.34 1.40
1721 1783 8.694540 TGCACTCCATTAGTTGCATTATTTATT 58.305 29.630 0.00 0.00 37.34 1.40
1722 1784 9.533253 GCACTCCATTAGTTGCATTATTTATTT 57.467 29.630 0.00 0.00 35.76 1.40
1734 1796 9.734620 TTGCATTATTTATTTCTCTGAATTCGG 57.265 29.630 8.06 8.06 0.00 4.30
1735 1797 8.902806 TGCATTATTTATTTCTCTGAATTCGGT 58.097 29.630 13.95 0.00 0.00 4.69
1736 1798 9.173939 GCATTATTTATTTCTCTGAATTCGGTG 57.826 33.333 13.95 11.68 0.00 4.94
1737 1799 9.669353 CATTATTTATTTCTCTGAATTCGGTGG 57.331 33.333 13.95 8.55 0.00 4.61
1738 1800 9.627123 ATTATTTATTTCTCTGAATTCGGTGGA 57.373 29.630 13.95 10.54 0.00 4.02
1739 1801 9.627123 TTATTTATTTCTCTGAATTCGGTGGAT 57.373 29.630 13.95 11.21 0.00 3.41
1740 1802 6.925610 TTATTTCTCTGAATTCGGTGGATG 57.074 37.500 13.95 1.92 0.00 3.51
1741 1803 2.988010 TCTCTGAATTCGGTGGATGG 57.012 50.000 13.95 0.40 0.00 3.51
1742 1804 2.466846 TCTCTGAATTCGGTGGATGGA 58.533 47.619 13.95 2.48 0.00 3.41
1743 1805 3.041211 TCTCTGAATTCGGTGGATGGAT 58.959 45.455 13.95 0.00 0.00 3.41
1744 1806 4.223144 TCTCTGAATTCGGTGGATGGATA 58.777 43.478 13.95 0.00 0.00 2.59
1745 1807 4.653801 TCTCTGAATTCGGTGGATGGATAA 59.346 41.667 13.95 0.00 0.00 1.75
1746 1808 4.960938 TCTGAATTCGGTGGATGGATAAG 58.039 43.478 13.95 0.00 0.00 1.73
1747 1809 4.067896 CTGAATTCGGTGGATGGATAAGG 58.932 47.826 6.08 0.00 0.00 2.69
1748 1810 3.458118 TGAATTCGGTGGATGGATAAGGT 59.542 43.478 0.04 0.00 0.00 3.50
1752 1814 1.488812 CGGTGGATGGATAAGGTGGAA 59.511 52.381 0.00 0.00 0.00 3.53
1756 1818 5.188948 CGGTGGATGGATAAGGTGGAATATA 59.811 44.000 0.00 0.00 0.00 0.86
1769 1831 7.568199 AGGTGGAATATAATGCTACAACAAC 57.432 36.000 0.00 0.00 0.00 3.32
1775 1837 9.289303 GGAATATAATGCTACAACAACTGTTTG 57.711 33.333 0.00 0.00 39.64 2.93
1780 1843 5.637006 TGCTACAACAACTGTTTGAACTT 57.363 34.783 0.00 0.00 39.64 2.66
1791 1854 5.437060 ACTGTTTGAACTTATGGTGTCTGT 58.563 37.500 0.00 0.00 0.00 3.41
1796 1859 7.012894 TGTTTGAACTTATGGTGTCTGTTTAGG 59.987 37.037 0.00 0.00 0.00 2.69
1797 1860 6.182507 TGAACTTATGGTGTCTGTTTAGGT 57.817 37.500 0.00 0.00 0.00 3.08
1798 1861 7.305813 TGAACTTATGGTGTCTGTTTAGGTA 57.694 36.000 0.00 0.00 0.00 3.08
1803 1866 9.582648 ACTTATGGTGTCTGTTTAGGTATTTTT 57.417 29.630 0.00 0.00 0.00 1.94
1831 1894 2.452823 AGAGGCCTGGAGTACCTGATAT 59.547 50.000 12.00 0.00 37.31 1.63
1832 1895 2.564947 GAGGCCTGGAGTACCTGATATG 59.435 54.545 12.00 0.00 37.31 1.78
1839 1902 4.631234 TGGAGTACCTGATATGAGGGTTT 58.369 43.478 13.23 0.00 37.45 3.27
1852 1915 4.589216 TGAGGGTTTTTGCTGAAATCTG 57.411 40.909 0.00 0.00 0.00 2.90
1854 1917 4.037923 TGAGGGTTTTTGCTGAAATCTGAC 59.962 41.667 0.00 0.00 0.00 3.51
1860 1923 6.074142 GGTTTTTGCTGAAATCTGACAATGAC 60.074 38.462 0.00 0.00 0.00 3.06
1861 1924 5.771153 TTTGCTGAAATCTGACAATGACA 57.229 34.783 0.00 0.00 0.00 3.58
1862 1925 5.771153 TTGCTGAAATCTGACAATGACAA 57.229 34.783 0.00 0.00 0.00 3.18
1870 1933 7.438757 TGAAATCTGACAATGACAACAATTTGG 59.561 33.333 0.78 0.00 37.00 3.28
1873 1936 6.638610 TCTGACAATGACAACAATTTGGTTT 58.361 32.000 0.78 0.00 37.00 3.27
1875 1938 7.277539 TCTGACAATGACAACAATTTGGTTTTC 59.722 33.333 0.78 0.00 37.00 2.29
1878 1941 6.255453 ACAATGACAACAATTTGGTTTTCGAG 59.745 34.615 0.78 0.00 37.00 4.04
1890 1953 8.661352 ATTTGGTTTTCGAGAATTTGACATTT 57.339 26.923 0.00 0.00 0.00 2.32
1892 1955 8.568732 TTGGTTTTCGAGAATTTGACATTTAC 57.431 30.769 0.00 0.00 0.00 2.01
1895 1959 7.114388 GGTTTTCGAGAATTTGACATTTACACC 59.886 37.037 0.00 0.00 0.00 4.16
1901 1965 2.552599 TTGACATTTACACCGAGGCA 57.447 45.000 0.00 0.00 0.00 4.75
1906 1970 3.686016 ACATTTACACCGAGGCATTCTT 58.314 40.909 0.00 0.00 0.00 2.52
1908 1972 2.851263 TTACACCGAGGCATTCTTGT 57.149 45.000 0.00 0.00 0.00 3.16
1912 1976 1.466167 CACCGAGGCATTCTTGTTCTG 59.534 52.381 0.00 0.00 0.00 3.02
1914 1978 2.005451 CCGAGGCATTCTTGTTCTGAG 58.995 52.381 0.00 0.00 0.00 3.35
1918 1982 2.039480 AGGCATTCTTGTTCTGAGAGCA 59.961 45.455 0.00 0.00 0.00 4.26
1919 1983 2.816087 GGCATTCTTGTTCTGAGAGCAA 59.184 45.455 11.23 11.23 32.34 3.91
1920 1984 3.365767 GGCATTCTTGTTCTGAGAGCAAC 60.366 47.826 7.68 0.00 30.27 4.17
1921 1985 3.251729 GCATTCTTGTTCTGAGAGCAACA 59.748 43.478 7.68 0.00 30.27 3.33
1922 1986 4.613167 GCATTCTTGTTCTGAGAGCAACAG 60.613 45.833 7.68 0.00 34.07 3.16
1923 1987 3.827008 TCTTGTTCTGAGAGCAACAGT 57.173 42.857 7.68 0.00 34.07 3.55
1924 1988 3.461061 TCTTGTTCTGAGAGCAACAGTG 58.539 45.455 7.68 0.00 34.07 3.66
1925 1989 3.132824 TCTTGTTCTGAGAGCAACAGTGA 59.867 43.478 7.68 1.52 34.07 3.41
1926 1990 3.758755 TGTTCTGAGAGCAACAGTGAT 57.241 42.857 0.00 0.00 36.81 3.06
1927 1991 4.077300 TGTTCTGAGAGCAACAGTGATT 57.923 40.909 0.00 0.00 36.81 2.57
1928 1992 3.811497 TGTTCTGAGAGCAACAGTGATTG 59.189 43.478 0.00 0.00 36.81 2.67
1929 1993 3.049708 TCTGAGAGCAACAGTGATTGG 57.950 47.619 0.00 0.00 36.81 3.16
1930 1994 1.467734 CTGAGAGCAACAGTGATTGGC 59.532 52.381 0.00 0.00 0.00 4.52
1931 1995 1.202794 TGAGAGCAACAGTGATTGGCA 60.203 47.619 0.00 0.00 0.00 4.92
1932 1996 1.467734 GAGAGCAACAGTGATTGGCAG 59.532 52.381 0.00 0.00 0.00 4.85
1933 1997 0.109412 GAGCAACAGTGATTGGCAGC 60.109 55.000 0.00 0.00 0.00 5.25
1947 2011 1.167851 GGCAGCAGCAGTAATTGTCA 58.832 50.000 2.65 0.00 44.61 3.58
1974 2038 4.524316 TTGGTGAATTTGCCTGAATCTG 57.476 40.909 1.77 0.00 0.00 2.90
1990 2070 7.632245 GCCTGAATCTGGAGCATTCTTTATTTT 60.632 37.037 10.52 0.00 32.32 1.82
1993 2073 7.121168 TGAATCTGGAGCATTCTTTATTTTCGT 59.879 33.333 0.00 0.00 32.32 3.85
2000 2080 7.648112 GGAGCATTCTTTATTTTCGTATTTCCC 59.352 37.037 0.00 0.00 0.00 3.97
2002 2082 7.123547 AGCATTCTTTATTTTCGTATTTCCCCA 59.876 33.333 0.00 0.00 0.00 4.96
2003 2083 7.222031 GCATTCTTTATTTTCGTATTTCCCCAC 59.778 37.037 0.00 0.00 0.00 4.61
2011 2091 2.106857 TCGTATTTCCCCACTTGTTGGT 59.893 45.455 0.00 0.00 45.25 3.67
2013 2093 3.305064 CGTATTTCCCCACTTGTTGGTTG 60.305 47.826 0.00 0.00 45.25 3.77
2030 2110 6.658816 TGTTGGTTGTGACATATTAATCTGCT 59.341 34.615 0.96 0.00 0.00 4.24
2036 2116 9.098355 GTTGTGACATATTAATCTGCTCAGTAA 57.902 33.333 0.96 2.05 0.00 2.24
2037 2117 8.648557 TGTGACATATTAATCTGCTCAGTAAC 57.351 34.615 0.96 0.00 0.00 2.50
2038 2118 8.478066 TGTGACATATTAATCTGCTCAGTAACT 58.522 33.333 0.96 0.00 0.00 2.24
2039 2119 9.319143 GTGACATATTAATCTGCTCAGTAACTT 57.681 33.333 0.96 0.00 0.00 2.66
2040 2120 9.890629 TGACATATTAATCTGCTCAGTAACTTT 57.109 29.630 0.96 0.00 0.00 2.66
2042 2122 9.890629 ACATATTAATCTGCTCAGTAACTTTCA 57.109 29.630 0.96 0.00 0.00 2.69
2047 2127 7.992754 AATCTGCTCAGTAACTTTCAATTCT 57.007 32.000 0.00 0.00 0.00 2.40
2048 2128 7.992754 ATCTGCTCAGTAACTTTCAATTCTT 57.007 32.000 0.00 0.00 0.00 2.52
2049 2129 7.807977 TCTGCTCAGTAACTTTCAATTCTTT 57.192 32.000 0.00 0.00 0.00 2.52
2050 2130 7.865707 TCTGCTCAGTAACTTTCAATTCTTTC 58.134 34.615 0.00 0.00 0.00 2.62
2051 2131 7.498900 TCTGCTCAGTAACTTTCAATTCTTTCA 59.501 33.333 0.00 0.00 0.00 2.69
2052 2132 8.169977 TGCTCAGTAACTTTCAATTCTTTCAT 57.830 30.769 0.00 0.00 0.00 2.57
2053 2133 8.077991 TGCTCAGTAACTTTCAATTCTTTCATG 58.922 33.333 0.00 0.00 0.00 3.07
2054 2134 8.078596 GCTCAGTAACTTTCAATTCTTTCATGT 58.921 33.333 0.00 0.00 0.00 3.21
2055 2135 9.604626 CTCAGTAACTTTCAATTCTTTCATGTC 57.395 33.333 0.00 0.00 0.00 3.06
2079 2159 1.532868 GAGCATAGCAAAGGTATGGCG 59.467 52.381 15.45 0.00 42.21 5.69
2080 2160 0.040067 GCATAGCAAAGGTATGGCGC 60.040 55.000 15.45 0.00 42.21 6.53
2081 2161 1.308047 CATAGCAAAGGTATGGCGCA 58.692 50.000 10.83 0.00 39.45 6.09
2082 2162 1.675483 CATAGCAAAGGTATGGCGCAA 59.325 47.619 10.83 0.00 39.45 4.85
2084 2164 0.527565 AGCAAAGGTATGGCGCAAAG 59.472 50.000 10.83 0.00 0.00 2.77
2085 2165 0.458370 GCAAAGGTATGGCGCAAAGG 60.458 55.000 10.83 0.00 0.00 3.11
2086 2166 0.887933 CAAAGGTATGGCGCAAAGGT 59.112 50.000 10.83 0.00 0.00 3.50
2087 2167 2.088423 CAAAGGTATGGCGCAAAGGTA 58.912 47.619 10.83 0.00 0.00 3.08
2088 2168 2.687935 CAAAGGTATGGCGCAAAGGTAT 59.312 45.455 10.83 0.00 0.00 2.73
2089 2169 1.967319 AGGTATGGCGCAAAGGTATG 58.033 50.000 10.83 0.00 0.00 2.39
2090 2170 0.951558 GGTATGGCGCAAAGGTATGG 59.048 55.000 10.83 0.00 0.00 2.74
2091 2171 0.310854 GTATGGCGCAAAGGTATGGC 59.689 55.000 10.83 0.00 0.00 4.40
2092 2172 0.106967 TATGGCGCAAAGGTATGGCA 60.107 50.000 10.83 0.00 41.33 4.92
2093 2173 1.386525 ATGGCGCAAAGGTATGGCAG 61.387 55.000 10.83 0.00 40.38 4.85
2094 2174 2.046285 GGCGCAAAGGTATGGCAGT 61.046 57.895 10.83 0.00 0.00 4.40
2095 2175 1.137404 GCGCAAAGGTATGGCAGTG 59.863 57.895 0.30 0.00 0.00 3.66
2099 2179 2.545526 CGCAAAGGTATGGCAGTGATAG 59.454 50.000 0.00 0.00 0.00 2.08
2106 2186 4.459685 AGGTATGGCAGTGATAGTATCGAC 59.540 45.833 5.68 5.40 0.00 4.20
2112 2192 5.009310 TGGCAGTGATAGTATCGACGTAATT 59.991 40.000 5.68 0.00 0.00 1.40
2113 2193 5.342525 GGCAGTGATAGTATCGACGTAATTG 59.657 44.000 5.68 0.00 0.00 2.32
2114 2194 5.164177 GCAGTGATAGTATCGACGTAATTGC 60.164 44.000 5.68 2.41 0.00 3.56
2115 2195 5.912955 CAGTGATAGTATCGACGTAATTGCA 59.087 40.000 5.68 0.00 0.00 4.08
2116 2196 6.086896 CAGTGATAGTATCGACGTAATTGCAG 59.913 42.308 5.68 0.00 0.00 4.41
2117 2197 4.915667 TGATAGTATCGACGTAATTGCAGC 59.084 41.667 5.68 0.00 0.00 5.25
2118 2198 3.438297 AGTATCGACGTAATTGCAGCT 57.562 42.857 0.00 0.00 0.00 4.24
2119 2199 4.563337 AGTATCGACGTAATTGCAGCTA 57.437 40.909 0.00 0.00 0.00 3.32
2121 2201 5.529791 AGTATCGACGTAATTGCAGCTATT 58.470 37.500 7.27 7.27 0.00 1.73
2122 2202 4.974103 ATCGACGTAATTGCAGCTATTC 57.026 40.909 5.26 0.00 0.00 1.75
2123 2203 4.041740 TCGACGTAATTGCAGCTATTCT 57.958 40.909 5.26 0.00 0.00 2.40
2124 2204 4.430007 TCGACGTAATTGCAGCTATTCTT 58.570 39.130 5.26 0.00 0.00 2.52
2126 2206 6.037726 TCGACGTAATTGCAGCTATTCTTTA 58.962 36.000 5.26 0.00 0.00 1.85
2127 2207 6.700081 TCGACGTAATTGCAGCTATTCTTTAT 59.300 34.615 5.26 0.00 0.00 1.40
2128 2208 7.223971 TCGACGTAATTGCAGCTATTCTTTATT 59.776 33.333 5.26 0.00 0.00 1.40
2129 2209 7.318909 CGACGTAATTGCAGCTATTCTTTATTG 59.681 37.037 5.26 0.00 0.00 1.90
2130 2210 6.912591 ACGTAATTGCAGCTATTCTTTATTGC 59.087 34.615 5.26 0.00 35.55 3.56
2131 2211 6.912051 CGTAATTGCAGCTATTCTTTATTGCA 59.088 34.615 5.26 0.00 39.52 4.08
2132 2212 7.112565 CGTAATTGCAGCTATTCTTTATTGCAG 59.887 37.037 5.26 0.00 41.84 4.41
2133 2213 5.902613 TTGCAGCTATTCTTTATTGCAGT 57.097 34.783 0.00 0.00 41.84 4.40
2135 2215 7.389803 TTGCAGCTATTCTTTATTGCAGTAA 57.610 32.000 0.00 0.00 41.84 2.24
2136 2216 7.572523 TGCAGCTATTCTTTATTGCAGTAAT 57.427 32.000 2.17 0.00 37.44 1.89
2137 2217 7.999679 TGCAGCTATTCTTTATTGCAGTAATT 58.000 30.769 2.17 0.00 37.44 1.40
2138 2218 7.916977 TGCAGCTATTCTTTATTGCAGTAATTG 59.083 33.333 2.17 0.13 37.44 2.32
2139 2219 7.917505 GCAGCTATTCTTTATTGCAGTAATTGT 59.082 33.333 2.17 0.00 37.44 2.71
2140 2220 9.793252 CAGCTATTCTTTATTGCAGTAATTGTT 57.207 29.630 2.17 0.00 37.44 2.83
2175 2376 9.618890 ATCTGCTCAGTAATAATTGTTGTATGT 57.381 29.630 0.00 0.00 0.00 2.29
2271 2472 5.398012 GGGCCACTAAGAGGATTCAGTTAAT 60.398 44.000 4.39 0.00 0.00 1.40
2299 2500 5.682943 TGTACACTTGGTTGACATTTAGC 57.317 39.130 0.00 0.00 0.00 3.09
2308 2509 4.892934 TGGTTGACATTTAGCAAGTTCCTT 59.107 37.500 0.00 0.00 0.00 3.36
2309 2510 5.362430 TGGTTGACATTTAGCAAGTTCCTTT 59.638 36.000 0.00 0.00 0.00 3.11
2311 2512 6.460953 GGTTGACATTTAGCAAGTTCCTTTCA 60.461 38.462 0.00 0.00 0.00 2.69
2316 2517 5.964958 TTTAGCAAGTTCCTTTCAGGATG 57.035 39.130 0.00 0.00 45.34 3.51
2333 2534 7.020827 TCAGGATGACTTATTTTTCTGGAGT 57.979 36.000 0.00 0.00 42.56 3.85
2352 2553 3.995048 GAGTGTTCCTACCTTTGTAGCAC 59.005 47.826 0.00 0.00 42.66 4.40
2356 2557 6.666546 AGTGTTCCTACCTTTGTAGCACTATA 59.333 38.462 8.68 0.00 40.79 1.31
2357 2558 7.179694 AGTGTTCCTACCTTTGTAGCACTATAA 59.820 37.037 8.68 0.00 40.79 0.98
2358 2559 7.985752 GTGTTCCTACCTTTGTAGCACTATAAT 59.014 37.037 0.00 0.00 42.66 1.28
2360 2561 9.043079 GTTCCTACCTTTGTAGCACTATAATTC 57.957 37.037 0.00 0.00 42.66 2.17
2361 2562 7.431249 TCCTACCTTTGTAGCACTATAATTCG 58.569 38.462 0.00 0.00 42.66 3.34
2363 2564 7.709613 CCTACCTTTGTAGCACTATAATTCGTT 59.290 37.037 0.00 0.00 42.66 3.85
2368 2569 9.690434 CTTTGTAGCACTATAATTCGTTTTCTC 57.310 33.333 0.00 0.00 0.00 2.87
2370 2571 8.181487 TGTAGCACTATAATTCGTTTTCTCAC 57.819 34.615 0.00 0.00 0.00 3.51
2371 2572 6.332504 AGCACTATAATTCGTTTTCTCACG 57.667 37.500 0.00 0.00 41.78 4.35
2372 2573 5.867716 AGCACTATAATTCGTTTTCTCACGT 59.132 36.000 0.00 0.00 41.16 4.49
2374 2575 6.392498 CACTATAATTCGTTTTCTCACGTCG 58.608 40.000 0.00 0.00 41.16 5.12
2375 2576 6.033196 CACTATAATTCGTTTTCTCACGTCGT 59.967 38.462 0.00 0.00 41.16 4.34
2376 2577 5.834239 ATAATTCGTTTTCTCACGTCGTT 57.166 34.783 0.00 0.00 41.16 3.85
2377 2578 4.525411 AATTCGTTTTCTCACGTCGTTT 57.475 36.364 0.00 0.00 41.16 3.60
2379 2580 3.995412 TCGTTTTCTCACGTCGTTTTT 57.005 38.095 0.00 0.00 41.16 1.94
2380 2581 3.915067 TCGTTTTCTCACGTCGTTTTTC 58.085 40.909 0.00 0.00 41.16 2.29
2382 2583 2.356386 TTTCTCACGTCGTTTTTCGC 57.644 45.000 0.00 0.00 39.67 4.70
2385 2586 1.862201 TCTCACGTCGTTTTTCGCAAT 59.138 42.857 0.00 0.00 39.67 3.56
2386 2587 1.962547 CTCACGTCGTTTTTCGCAATG 59.037 47.619 0.00 0.00 39.67 2.82
2387 2588 1.041726 CACGTCGTTTTTCGCAATGG 58.958 50.000 0.00 0.00 39.67 3.16
2388 2589 0.658897 ACGTCGTTTTTCGCAATGGT 59.341 45.000 0.00 0.00 39.67 3.55
2392 2858 1.676529 TCGTTTTTCGCAATGGTTCCA 59.323 42.857 0.00 0.00 39.67 3.53
2426 2892 7.067737 TGTCATTCTGTGGTGTACTATCGAATA 59.932 37.037 0.00 0.00 0.00 1.75
2447 2913 4.292186 ACCATCTTGTCTGTGCATACTT 57.708 40.909 0.00 0.00 0.00 2.24
2458 2924 3.937706 CTGTGCATACTTTCTTCCAGGAG 59.062 47.826 0.00 0.00 0.00 3.69
2521 2987 3.066621 TGTCATTTGTCAACTGCTTGTCC 59.933 43.478 0.00 0.00 0.00 4.02
2529 2995 1.029408 AACTGCTTGTCCGTTGCACA 61.029 50.000 0.00 0.00 32.91 4.57
2530 2996 0.819259 ACTGCTTGTCCGTTGCACAT 60.819 50.000 0.00 0.00 32.91 3.21
2532 2998 1.081242 GCTTGTCCGTTGCACATGG 60.081 57.895 0.00 0.00 0.00 3.66
2572 3038 5.363562 AAGCTAATCATGATCTGTGACCA 57.636 39.130 9.06 0.00 0.00 4.02
2599 3065 3.413846 TTTCTGTTCTCTCTGCAGCAT 57.586 42.857 9.47 0.00 0.00 3.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 6.306643 ACAAATCTTCAAAAACAAGGGGAA 57.693 33.333 0.00 0.00 0.00 3.97
56 59 8.609483 AGAATAGAGACGGGGTATATTAGTACA 58.391 37.037 0.00 0.00 0.00 2.90
69 72 1.269309 CGCCAGAAGAATAGAGACGGG 60.269 57.143 0.00 0.00 0.00 5.28
77 80 3.188460 GCAAACAAGACGCCAGAAGAATA 59.812 43.478 0.00 0.00 0.00 1.75
89 92 3.712187 TCATTTTTCGGGCAAACAAGAC 58.288 40.909 0.00 0.00 0.00 3.01
142 145 0.759436 GAGAGGCCTCGGGGACATAA 60.759 60.000 26.95 0.00 45.05 1.90
176 179 1.819305 GCGATGGGCCCTGATTGTATT 60.819 52.381 25.70 0.00 34.80 1.89
238 255 1.942223 GGTGTTTTGTGCGGCGAAC 60.942 57.895 12.09 12.09 0.00 3.95
254 271 3.823873 CTCCTTCGATGATACTAGCAGGT 59.176 47.826 0.00 0.00 0.00 4.00
270 287 3.503748 CCATTGAACTGGACAACTCCTTC 59.496 47.826 0.00 0.00 38.69 3.46
278 295 2.906389 AGCTCTACCATTGAACTGGACA 59.094 45.455 0.00 0.00 39.73 4.02
320 337 1.001633 GGCGGGAGTACTTTGACAAGA 59.998 52.381 0.00 0.00 33.72 3.02
375 392 2.672961 TCAAGGACGGAGCATAACAG 57.327 50.000 0.00 0.00 0.00 3.16
378 395 1.209261 TGCATCAAGGACGGAGCATAA 59.791 47.619 0.00 0.00 0.00 1.90
380 397 0.182061 ATGCATCAAGGACGGAGCAT 59.818 50.000 0.00 0.00 37.83 3.79
409 427 1.978580 GAGGAAGACAAGGGAGGTTGA 59.021 52.381 0.00 0.00 0.00 3.18
414 432 1.748493 CGAGAGAGGAAGACAAGGGAG 59.252 57.143 0.00 0.00 0.00 4.30
420 438 2.493675 CAACATCCGAGAGAGGAAGACA 59.506 50.000 0.00 0.00 44.50 3.41
485 507 3.116939 AGCATATGAGGACCTCTACCAGT 60.117 47.826 22.14 0.94 0.00 4.00
507 529 1.344065 TGAGTTAAGCAAGGGGTCGA 58.656 50.000 0.00 0.00 0.00 4.20
521 543 0.101399 CGCAGACCGAGCTATGAGTT 59.899 55.000 0.00 0.00 40.02 3.01
536 558 2.693069 AGATGTCAAAGAAGGTCGCAG 58.307 47.619 0.00 0.00 0.00 5.18
541 563 6.831976 AGAAGTACAAGATGTCAAAGAAGGT 58.168 36.000 0.00 0.00 0.00 3.50
551 573 6.070538 AGGCAACATAGAGAAGTACAAGATGT 60.071 38.462 0.00 0.00 41.41 3.06
607 629 8.972458 AAGGCTATTAAGGAGAAGAAAGATTC 57.028 34.615 0.00 0.00 0.00 2.52
672 694 3.583228 TGTGTCCAAGGGAAGTAGAAGA 58.417 45.455 0.00 0.00 31.38 2.87
697 719 5.438761 AATTGTGTTAGGTGAGTTTGCTC 57.561 39.130 0.00 0.00 41.97 4.26
698 720 5.852282 AAATTGTGTTAGGTGAGTTTGCT 57.148 34.783 0.00 0.00 0.00 3.91
699 721 7.367285 TCATAAATTGTGTTAGGTGAGTTTGC 58.633 34.615 0.00 0.00 0.00 3.68
700 722 8.567948 ACTCATAAATTGTGTTAGGTGAGTTTG 58.432 33.333 0.00 0.00 41.41 2.93
701 723 8.567948 CACTCATAAATTGTGTTAGGTGAGTTT 58.432 33.333 0.00 0.00 42.04 2.66
702 724 7.174946 CCACTCATAAATTGTGTTAGGTGAGTT 59.825 37.037 0.00 0.00 42.04 3.01
703 725 6.655003 CCACTCATAAATTGTGTTAGGTGAGT 59.345 38.462 0.00 0.00 44.02 3.41
704 726 6.655003 ACCACTCATAAATTGTGTTAGGTGAG 59.345 38.462 0.00 0.00 38.18 3.51
705 727 6.539173 ACCACTCATAAATTGTGTTAGGTGA 58.461 36.000 0.00 0.00 30.91 4.02
706 728 6.817765 ACCACTCATAAATTGTGTTAGGTG 57.182 37.500 0.00 0.00 30.91 4.00
707 729 8.956426 CAATACCACTCATAAATTGTGTTAGGT 58.044 33.333 0.00 0.00 34.40 3.08
708 730 8.405531 CCAATACCACTCATAAATTGTGTTAGG 58.594 37.037 0.00 0.00 29.78 2.69
709 731 9.173021 TCCAATACCACTCATAAATTGTGTTAG 57.827 33.333 0.00 0.00 29.78 2.34
710 732 9.693739 ATCCAATACCACTCATAAATTGTGTTA 57.306 29.630 0.00 0.00 29.78 2.41
711 733 8.593945 ATCCAATACCACTCATAAATTGTGTT 57.406 30.769 0.00 0.00 29.78 3.32
712 734 9.342308 CTATCCAATACCACTCATAAATTGTGT 57.658 33.333 0.00 0.00 32.38 3.72
713 735 9.342308 ACTATCCAATACCACTCATAAATTGTG 57.658 33.333 0.00 0.00 0.00 3.33
714 736 9.920946 AACTATCCAATACCACTCATAAATTGT 57.079 29.630 0.00 0.00 0.00 2.71
717 739 9.784531 CTGAACTATCCAATACCACTCATAAAT 57.215 33.333 0.00 0.00 0.00 1.40
718 740 8.210946 CCTGAACTATCCAATACCACTCATAAA 58.789 37.037 0.00 0.00 0.00 1.40
719 741 7.202093 CCCTGAACTATCCAATACCACTCATAA 60.202 40.741 0.00 0.00 0.00 1.90
720 742 6.270000 CCCTGAACTATCCAATACCACTCATA 59.730 42.308 0.00 0.00 0.00 2.15
721 743 5.072329 CCCTGAACTATCCAATACCACTCAT 59.928 44.000 0.00 0.00 0.00 2.90
722 744 4.408921 CCCTGAACTATCCAATACCACTCA 59.591 45.833 0.00 0.00 0.00 3.41
723 745 4.202367 CCCCTGAACTATCCAATACCACTC 60.202 50.000 0.00 0.00 0.00 3.51
724 746 3.716872 CCCCTGAACTATCCAATACCACT 59.283 47.826 0.00 0.00 0.00 4.00
725 747 3.181443 CCCCCTGAACTATCCAATACCAC 60.181 52.174 0.00 0.00 0.00 4.16
726 748 3.053077 CCCCCTGAACTATCCAATACCA 58.947 50.000 0.00 0.00 0.00 3.25
727 749 3.053826 ACCCCCTGAACTATCCAATACC 58.946 50.000 0.00 0.00 0.00 2.73
728 750 4.790718 AACCCCCTGAACTATCCAATAC 57.209 45.455 0.00 0.00 0.00 1.89
729 751 5.371472 CCTTAACCCCCTGAACTATCCAATA 59.629 44.000 0.00 0.00 0.00 1.90
730 752 4.168088 CCTTAACCCCCTGAACTATCCAAT 59.832 45.833 0.00 0.00 0.00 3.16
731 753 3.526019 CCTTAACCCCCTGAACTATCCAA 59.474 47.826 0.00 0.00 0.00 3.53
732 754 3.120108 CCTTAACCCCCTGAACTATCCA 58.880 50.000 0.00 0.00 0.00 3.41
733 755 2.442126 CCCTTAACCCCCTGAACTATCC 59.558 54.545 0.00 0.00 0.00 2.59
734 756 3.390819 TCCCTTAACCCCCTGAACTATC 58.609 50.000 0.00 0.00 0.00 2.08
735 757 3.394645 CTCCCTTAACCCCCTGAACTAT 58.605 50.000 0.00 0.00 0.00 2.12
736 758 2.841795 CTCCCTTAACCCCCTGAACTA 58.158 52.381 0.00 0.00 0.00 2.24
737 759 1.670059 CTCCCTTAACCCCCTGAACT 58.330 55.000 0.00 0.00 0.00 3.01
738 760 0.034380 GCTCCCTTAACCCCCTGAAC 60.034 60.000 0.00 0.00 0.00 3.18
739 761 0.476808 TGCTCCCTTAACCCCCTGAA 60.477 55.000 0.00 0.00 0.00 3.02
740 762 0.476808 TTGCTCCCTTAACCCCCTGA 60.477 55.000 0.00 0.00 0.00 3.86
741 763 0.407918 TTTGCTCCCTTAACCCCCTG 59.592 55.000 0.00 0.00 0.00 4.45
742 764 1.163408 TTTTGCTCCCTTAACCCCCT 58.837 50.000 0.00 0.00 0.00 4.79
743 765 2.018355 TTTTTGCTCCCTTAACCCCC 57.982 50.000 0.00 0.00 0.00 5.40
760 782 9.443323 GTTTGCATAACCCCATTAATTACTTTT 57.557 29.630 0.00 0.00 0.00 2.27
761 783 8.044309 GGTTTGCATAACCCCATTAATTACTTT 58.956 33.333 15.77 0.00 34.26 2.66
762 784 7.181125 TGGTTTGCATAACCCCATTAATTACTT 59.819 33.333 20.83 0.00 39.54 2.24
763 785 6.670027 TGGTTTGCATAACCCCATTAATTACT 59.330 34.615 20.83 0.00 39.54 2.24
764 786 6.879400 TGGTTTGCATAACCCCATTAATTAC 58.121 36.000 20.83 1.32 39.54 1.89
765 787 6.407525 GCTGGTTTGCATAACCCCATTAATTA 60.408 38.462 20.83 5.48 39.54 1.40
766 788 5.628899 GCTGGTTTGCATAACCCCATTAATT 60.629 40.000 20.83 0.00 39.54 1.40
767 789 4.141733 GCTGGTTTGCATAACCCCATTAAT 60.142 41.667 20.83 0.00 39.54 1.40
768 790 3.196685 GCTGGTTTGCATAACCCCATTAA 59.803 43.478 20.83 7.01 39.54 1.40
769 791 2.763448 GCTGGTTTGCATAACCCCATTA 59.237 45.455 20.83 7.53 39.54 1.90
770 792 1.554617 GCTGGTTTGCATAACCCCATT 59.445 47.619 20.83 0.00 39.54 3.16
771 793 1.194218 GCTGGTTTGCATAACCCCAT 58.806 50.000 20.83 0.00 39.54 4.00
772 794 0.902516 GGCTGGTTTGCATAACCCCA 60.903 55.000 20.83 6.58 39.54 4.96
773 795 0.902516 TGGCTGGTTTGCATAACCCC 60.903 55.000 20.83 17.15 39.54 4.95
774 796 0.246360 GTGGCTGGTTTGCATAACCC 59.754 55.000 20.83 11.07 39.54 4.11
775 797 1.256812 AGTGGCTGGTTTGCATAACC 58.743 50.000 18.38 18.38 40.67 2.85
776 798 3.059166 CAAAGTGGCTGGTTTGCATAAC 58.941 45.455 0.00 0.00 34.04 1.89
777 799 2.697751 ACAAAGTGGCTGGTTTGCATAA 59.302 40.909 0.00 0.00 37.19 1.90
778 800 2.315176 ACAAAGTGGCTGGTTTGCATA 58.685 42.857 0.00 0.00 37.19 3.14
779 801 1.122227 ACAAAGTGGCTGGTTTGCAT 58.878 45.000 0.00 0.00 37.19 3.96
780 802 0.901124 AACAAAGTGGCTGGTTTGCA 59.099 45.000 6.67 0.00 37.19 4.08
781 803 1.134848 TGAACAAAGTGGCTGGTTTGC 60.135 47.619 6.67 0.00 37.19 3.68
782 804 2.957491 TGAACAAAGTGGCTGGTTTG 57.043 45.000 5.58 5.58 39.19 2.93
783 805 2.168313 CCTTGAACAAAGTGGCTGGTTT 59.832 45.455 0.00 0.00 33.66 3.27
784 806 1.756538 CCTTGAACAAAGTGGCTGGTT 59.243 47.619 0.00 0.00 33.66 3.67
785 807 1.402787 CCTTGAACAAAGTGGCTGGT 58.597 50.000 0.00 0.00 33.66 4.00
786 808 0.675633 CCCTTGAACAAAGTGGCTGG 59.324 55.000 0.00 0.00 33.66 4.85
787 809 1.610522 CTCCCTTGAACAAAGTGGCTG 59.389 52.381 0.00 0.00 33.66 4.85
788 810 1.215423 ACTCCCTTGAACAAAGTGGCT 59.785 47.619 0.00 0.00 33.66 4.75
789 811 1.692411 ACTCCCTTGAACAAAGTGGC 58.308 50.000 0.00 0.00 33.66 5.01
790 812 5.845391 TTTAACTCCCTTGAACAAAGTGG 57.155 39.130 0.00 0.00 33.66 4.00
791 813 6.040391 TCCATTTAACTCCCTTGAACAAAGTG 59.960 38.462 0.00 0.00 33.66 3.16
792 814 6.040504 GTCCATTTAACTCCCTTGAACAAAGT 59.959 38.462 0.00 0.00 33.66 2.66
793 815 6.265422 AGTCCATTTAACTCCCTTGAACAAAG 59.735 38.462 0.00 0.00 35.47 2.77
794 816 6.133356 AGTCCATTTAACTCCCTTGAACAAA 58.867 36.000 0.00 0.00 0.00 2.83
795 817 5.701224 AGTCCATTTAACTCCCTTGAACAA 58.299 37.500 0.00 0.00 0.00 2.83
796 818 5.319043 AGTCCATTTAACTCCCTTGAACA 57.681 39.130 0.00 0.00 0.00 3.18
797 819 6.004574 AGAAGTCCATTTAACTCCCTTGAAC 58.995 40.000 0.00 0.00 0.00 3.18
798 820 6.200878 AGAAGTCCATTTAACTCCCTTGAA 57.799 37.500 0.00 0.00 0.00 2.69
799 821 5.843019 AGAAGTCCATTTAACTCCCTTGA 57.157 39.130 0.00 0.00 0.00 3.02
800 822 6.901081 AAAGAAGTCCATTTAACTCCCTTG 57.099 37.500 0.00 0.00 0.00 3.61
801 823 7.066781 TGAAAAGAAGTCCATTTAACTCCCTT 58.933 34.615 0.00 0.00 0.00 3.95
802 824 6.610830 TGAAAAGAAGTCCATTTAACTCCCT 58.389 36.000 0.00 0.00 0.00 4.20
803 825 6.894339 TGAAAAGAAGTCCATTTAACTCCC 57.106 37.500 0.00 0.00 0.00 4.30
904 926 8.817100 CGCACACTATGAGAAAAGAATAACATA 58.183 33.333 0.00 0.00 0.00 2.29
905 927 7.549134 TCGCACACTATGAGAAAAGAATAACAT 59.451 33.333 0.00 0.00 33.72 2.71
913 935 6.835914 AGAAAATCGCACACTATGAGAAAAG 58.164 36.000 0.00 0.00 40.83 2.27
916 938 6.801539 AAAGAAAATCGCACACTATGAGAA 57.198 33.333 0.00 0.00 40.83 2.87
920 942 5.942872 AGGAAAAGAAAATCGCACACTATG 58.057 37.500 0.00 0.00 0.00 2.23
925 947 5.763204 AGAGTAAGGAAAAGAAAATCGCACA 59.237 36.000 0.00 0.00 0.00 4.57
926 948 6.242508 AGAGTAAGGAAAAGAAAATCGCAC 57.757 37.500 0.00 0.00 0.00 5.34
929 951 6.668323 TGCAAGAGTAAGGAAAAGAAAATCG 58.332 36.000 0.00 0.00 0.00 3.34
935 957 3.815401 GTGCTGCAAGAGTAAGGAAAAGA 59.185 43.478 2.77 0.00 34.07 2.52
936 958 3.817647 AGTGCTGCAAGAGTAAGGAAAAG 59.182 43.478 2.77 0.00 34.07 2.27
937 959 3.565482 CAGTGCTGCAAGAGTAAGGAAAA 59.435 43.478 2.77 0.00 34.07 2.29
938 960 3.141398 CAGTGCTGCAAGAGTAAGGAAA 58.859 45.455 2.77 0.00 34.07 3.13
939 961 2.104792 ACAGTGCTGCAAGAGTAAGGAA 59.895 45.455 2.77 0.00 34.07 3.36
940 962 1.694150 ACAGTGCTGCAAGAGTAAGGA 59.306 47.619 2.77 0.00 34.07 3.36
941 963 2.072298 GACAGTGCTGCAAGAGTAAGG 58.928 52.381 2.77 0.00 34.07 2.69
942 964 2.072298 GGACAGTGCTGCAAGAGTAAG 58.928 52.381 2.77 0.00 34.07 2.34
943 965 1.605457 CGGACAGTGCTGCAAGAGTAA 60.605 52.381 2.77 0.00 34.07 2.24
944 966 0.038251 CGGACAGTGCTGCAAGAGTA 60.038 55.000 2.77 0.00 34.07 2.59
945 967 1.301244 CGGACAGTGCTGCAAGAGT 60.301 57.895 2.77 2.93 34.07 3.24
946 968 2.031516 CCGGACAGTGCTGCAAGAG 61.032 63.158 2.77 0.00 34.07 2.85
957 979 4.817517 ACTGTAACTGAAATACCGGACAG 58.182 43.478 9.46 9.92 39.14 3.51
973 995 8.718158 ATCTCAGGATCATCATCTAACTGTAA 57.282 34.615 0.00 0.00 0.00 2.41
978 1000 9.585099 GTCATAATCTCAGGATCATCATCTAAC 57.415 37.037 0.00 0.00 0.00 2.34
984 1006 6.736110 TGTGTCATAATCTCAGGATCATCA 57.264 37.500 0.00 0.00 0.00 3.07
987 1009 8.812513 AATTTTGTGTCATAATCTCAGGATCA 57.187 30.769 0.00 0.00 0.00 2.92
990 1012 9.904198 TGATAATTTTGTGTCATAATCTCAGGA 57.096 29.630 0.00 0.00 0.00 3.86
1003 1025 8.034804 GGTAAGCAAATCCTGATAATTTTGTGT 58.965 33.333 0.00 0.00 32.88 3.72
1005 1027 8.366359 AGGTAAGCAAATCCTGATAATTTTGT 57.634 30.769 0.00 0.00 32.88 2.83
1015 1037 7.639113 TGGTAATTAAGGTAAGCAAATCCTG 57.361 36.000 0.00 0.00 0.00 3.86
1017 1039 8.691797 TGATTGGTAATTAAGGTAAGCAAATCC 58.308 33.333 0.00 0.00 33.56 3.01
1018 1040 9.516314 GTGATTGGTAATTAAGGTAAGCAAATC 57.484 33.333 0.00 0.00 33.56 2.17
1026 1048 8.103935 TGTGTGATGTGATTGGTAATTAAGGTA 58.896 33.333 0.00 0.00 0.00 3.08
1027 1049 6.945435 TGTGTGATGTGATTGGTAATTAAGGT 59.055 34.615 0.00 0.00 0.00 3.50
1028 1050 7.336679 TCTGTGTGATGTGATTGGTAATTAAGG 59.663 37.037 0.00 0.00 0.00 2.69
1030 1052 8.806429 ATCTGTGTGATGTGATTGGTAATTAA 57.194 30.769 0.00 0.00 33.43 1.40
1031 1053 8.806429 AATCTGTGTGATGTGATTGGTAATTA 57.194 30.769 0.00 0.00 35.21 1.40
1032 1054 7.707624 AATCTGTGTGATGTGATTGGTAATT 57.292 32.000 0.00 0.00 35.21 1.40
1037 1059 4.740268 CCAAATCTGTGTGATGTGATTGG 58.260 43.478 0.00 0.00 41.79 3.16
1044 1066 4.398358 AGATTCTGCCAAATCTGTGTGATG 59.602 41.667 9.25 0.00 42.88 3.07
1049 1071 5.578005 ATGAAGATTCTGCCAAATCTGTG 57.422 39.130 10.46 0.00 43.53 3.66
1071 1093 8.556589 TCCTCAATAAGACCATTTCCTTCAATA 58.443 33.333 0.00 0.00 0.00 1.90
1086 1108 6.016276 GCAAAGTTTGAACCTCCTCAATAAGA 60.016 38.462 19.82 0.00 35.31 2.10
1095 1117 3.535280 TTTGGCAAAGTTTGAACCTCC 57.465 42.857 19.82 10.56 0.00 4.30
1096 1118 3.871006 CCTTTTGGCAAAGTTTGAACCTC 59.129 43.478 19.82 0.80 38.22 3.85
1113 1135 1.828979 TAAAGAATCCCGCGCCTTTT 58.171 45.000 11.41 0.00 32.00 2.27
1130 1152 5.822519 AGTGGAGCGAGCAATTCAATTATAA 59.177 36.000 0.00 0.00 0.00 0.98
1132 1154 4.202441 AGTGGAGCGAGCAATTCAATTAT 58.798 39.130 0.00 0.00 0.00 1.28
1134 1156 2.440409 AGTGGAGCGAGCAATTCAATT 58.560 42.857 0.00 0.00 0.00 2.32
1152 1174 9.347240 CCATCATTATCTTGAATCCAACTAAGT 57.653 33.333 0.00 0.00 0.00 2.24
1153 1175 9.347240 ACCATCATTATCTTGAATCCAACTAAG 57.653 33.333 0.00 0.00 0.00 2.18
1155 1177 7.939039 GGACCATCATTATCTTGAATCCAACTA 59.061 37.037 0.00 0.00 31.44 2.24
1162 1184 7.941238 CCTAACAGGACCATCATTATCTTGAAT 59.059 37.037 0.00 0.00 37.67 2.57
1167 1189 6.831664 AACCTAACAGGACCATCATTATCT 57.168 37.500 0.00 0.00 37.67 1.98
1174 1196 7.881751 ACTAAAAAGTAACCTAACAGGACCATC 59.118 37.037 0.00 0.00 37.67 3.51
1175 1197 7.752638 ACTAAAAAGTAACCTAACAGGACCAT 58.247 34.615 0.00 0.00 37.67 3.55
1179 1201 9.683870 TCAAAACTAAAAAGTAACCTAACAGGA 57.316 29.630 0.00 0.00 37.67 3.86
1208 1230 8.593945 TCTAAAGAACCCAATGCAATAAAGAT 57.406 30.769 0.00 0.00 0.00 2.40
1257 1279 8.663167 ACATCCTTCATATCCTTGTAATGATCA 58.337 33.333 0.00 0.00 30.17 2.92
1261 1283 8.915057 AGAACATCCTTCATATCCTTGTAATG 57.085 34.615 0.00 0.00 0.00 1.90
1266 1288 5.847304 TCGAGAACATCCTTCATATCCTTG 58.153 41.667 0.00 0.00 0.00 3.61
1267 1289 6.463614 CCTTCGAGAACATCCTTCATATCCTT 60.464 42.308 0.00 0.00 0.00 3.36
1288 1310 4.139038 AGAGGTCTCGCTATAGTTCCTTC 58.861 47.826 0.84 0.00 34.09 3.46
1289 1311 4.173290 AGAGGTCTCGCTATAGTTCCTT 57.827 45.455 0.84 0.00 34.09 3.36
1291 1313 5.065235 ACTAAGAGGTCTCGCTATAGTTCC 58.935 45.833 0.84 0.00 34.09 3.62
1298 1320 5.336531 CCAGAAAAACTAAGAGGTCTCGCTA 60.337 44.000 0.00 0.00 34.09 4.26
1299 1321 4.561105 CAGAAAAACTAAGAGGTCTCGCT 58.439 43.478 0.00 0.00 34.09 4.93
1301 1323 3.680458 GCCAGAAAAACTAAGAGGTCTCG 59.320 47.826 0.00 0.00 34.09 4.04
1304 1326 4.822350 AGTTGCCAGAAAAACTAAGAGGTC 59.178 41.667 0.00 0.00 34.90 3.85
1313 1335 5.407502 ACTTGTTGTAGTTGCCAGAAAAAC 58.592 37.500 0.00 0.00 0.00 2.43
1329 1351 5.108385 AGAAGTCGGCATTTAACTTGTTG 57.892 39.130 0.00 0.00 33.54 3.33
1339 1361 2.749621 GGATGTTGAAGAAGTCGGCATT 59.250 45.455 0.00 0.00 0.00 3.56
1340 1362 2.290260 TGGATGTTGAAGAAGTCGGCAT 60.290 45.455 0.00 0.00 0.00 4.40
1351 1374 3.849574 TGAACCCCTAGATGGATGTTGAA 59.150 43.478 5.39 0.00 38.35 2.69
1352 1375 3.455910 CTGAACCCCTAGATGGATGTTGA 59.544 47.826 5.39 0.00 38.35 3.18
1363 1386 1.872773 AAGAGAGCCTGAACCCCTAG 58.127 55.000 0.00 0.00 0.00 3.02
1387 1410 7.054751 GGATAACCTGCTATTCCTTTGTAAGT 58.945 38.462 0.00 0.00 0.00 2.24
1413 1436 1.354368 GGAACTTTGATGAGGGACCCA 59.646 52.381 14.60 0.00 0.00 4.51
1419 1442 5.521735 CGTCAATAGAGGAACTTTGATGAGG 59.478 44.000 0.00 0.00 41.55 3.86
1430 1453 3.953712 TGCAACTCGTCAATAGAGGAA 57.046 42.857 0.00 0.00 38.11 3.36
1434 1457 5.339008 AGGTAATGCAACTCGTCAATAGA 57.661 39.130 0.00 0.00 0.00 1.98
1435 1458 6.422776 AAAGGTAATGCAACTCGTCAATAG 57.577 37.500 0.00 0.00 0.00 1.73
1437 1460 5.240623 TGAAAAGGTAATGCAACTCGTCAAT 59.759 36.000 0.00 0.00 0.00 2.57
1438 1461 4.576873 TGAAAAGGTAATGCAACTCGTCAA 59.423 37.500 0.00 0.00 0.00 3.18
1449 1472 6.644347 TCTAAGAGGCTCTGAAAAGGTAATG 58.356 40.000 19.53 0.00 0.00 1.90
1450 1473 6.875972 TCTAAGAGGCTCTGAAAAGGTAAT 57.124 37.500 19.53 0.06 0.00 1.89
1458 1481 4.383552 GCTGGAAATCTAAGAGGCTCTGAA 60.384 45.833 19.53 8.73 0.00 3.02
1465 1488 4.878397 ACGAAATGCTGGAAATCTAAGAGG 59.122 41.667 0.00 0.00 0.00 3.69
1479 1502 4.758688 TGATCATGTACTGACGAAATGCT 58.241 39.130 0.00 0.00 36.48 3.79
1481 1504 4.567959 TGCTGATCATGTACTGACGAAATG 59.432 41.667 0.00 0.00 36.48 2.32
1498 1521 4.180817 TCATACGTCGACATTTTGCTGAT 58.819 39.130 17.16 0.00 0.00 2.90
1500 1523 3.989705 TCATACGTCGACATTTTGCTG 57.010 42.857 17.16 2.96 0.00 4.41
1505 1528 5.263968 AGGAGAATCATACGTCGACATTT 57.736 39.130 17.16 1.21 36.25 2.32
1512 1535 3.223435 TCCTGGAGGAGAATCATACGTC 58.777 50.000 0.00 0.00 39.78 4.34
1513 1536 3.314307 TCCTGGAGGAGAATCATACGT 57.686 47.619 0.00 0.00 39.78 3.57
1515 1538 3.389329 TGCTTCCTGGAGGAGAATCATAC 59.611 47.826 10.38 0.00 46.36 2.39
1519 1542 3.574354 AATGCTTCCTGGAGGAGAATC 57.426 47.619 10.38 0.00 46.36 2.52
1527 1550 1.568504 ACTCCGTAATGCTTCCTGGA 58.431 50.000 0.00 0.00 0.00 3.86
1573 1596 7.915397 GCCTTCACGAATAATGTCACAATAATT 59.085 33.333 0.00 0.00 0.00 1.40
1574 1597 7.066887 TGCCTTCACGAATAATGTCACAATAAT 59.933 33.333 0.00 0.00 0.00 1.28
1575 1598 6.372937 TGCCTTCACGAATAATGTCACAATAA 59.627 34.615 0.00 0.00 0.00 1.40
1581 1604 3.270027 CCTGCCTTCACGAATAATGTCA 58.730 45.455 0.00 0.00 0.00 3.58
1582 1605 2.614057 CCCTGCCTTCACGAATAATGTC 59.386 50.000 0.00 0.00 0.00 3.06
1583 1606 2.643551 CCCTGCCTTCACGAATAATGT 58.356 47.619 0.00 0.00 0.00 2.71
1584 1607 1.334869 GCCCTGCCTTCACGAATAATG 59.665 52.381 0.00 0.00 0.00 1.90
1585 1608 1.064758 TGCCCTGCCTTCACGAATAAT 60.065 47.619 0.00 0.00 0.00 1.28
1592 1615 1.518903 GAACTGTGCCCTGCCTTCAC 61.519 60.000 0.00 0.00 0.00 3.18
1594 1617 2.328099 CGAACTGTGCCCTGCCTTC 61.328 63.158 0.00 0.00 0.00 3.46
1602 1625 2.961526 TAAGAGGATCGAACTGTGCC 57.038 50.000 0.00 0.00 42.67 5.01
1611 1634 2.286418 GCCAAACGCATTAAGAGGATCG 60.286 50.000 0.00 0.00 37.62 3.69
1613 1636 2.722094 TGCCAAACGCATTAAGAGGAT 58.278 42.857 0.00 0.00 44.64 3.24
1626 1649 8.408601 AGATCATCATAACTTTGTATGCCAAAC 58.591 33.333 0.00 0.00 38.12 2.93
1632 1655 9.740239 CCCAAAAGATCATCATAACTTTGTATG 57.260 33.333 0.00 0.00 33.72 2.39
1635 1658 6.351286 GGCCCAAAAGATCATCATAACTTTGT 60.351 38.462 0.00 0.00 33.72 2.83
1638 1661 5.522641 AGGCCCAAAAGATCATCATAACTT 58.477 37.500 0.00 0.00 0.00 2.66
1640 1663 5.127682 ACAAGGCCCAAAAGATCATCATAAC 59.872 40.000 0.00 0.00 0.00 1.89
1650 1673 0.263172 TCCCAACAAGGCCCAAAAGA 59.737 50.000 0.00 0.00 35.39 2.52
1658 1681 3.004752 ACAGTATCATCCCAACAAGGC 57.995 47.619 0.00 0.00 35.39 4.35
1659 1682 4.130118 GCTACAGTATCATCCCAACAAGG 58.870 47.826 0.00 0.00 37.03 3.61
1693 1716 4.644103 AATGCAACTAATGGAGTGCATC 57.356 40.909 10.14 0.00 44.81 3.91
1696 1719 9.533253 AAATAAATAATGCAACTAATGGAGTGC 57.467 29.630 0.00 0.00 38.87 4.40
1712 1774 9.627123 TCCACCGAATTCAGAGAAATAAATAAT 57.373 29.630 6.22 0.00 0.00 1.28
1713 1775 9.627123 ATCCACCGAATTCAGAGAAATAAATAA 57.373 29.630 6.22 0.00 0.00 1.40
1714 1776 9.056005 CATCCACCGAATTCAGAGAAATAAATA 57.944 33.333 6.22 0.00 0.00 1.40
1715 1777 7.013655 CCATCCACCGAATTCAGAGAAATAAAT 59.986 37.037 6.22 0.00 0.00 1.40
1716 1778 6.318648 CCATCCACCGAATTCAGAGAAATAAA 59.681 38.462 6.22 0.00 0.00 1.40
1717 1779 5.822519 CCATCCACCGAATTCAGAGAAATAA 59.177 40.000 6.22 0.00 0.00 1.40
1718 1780 5.130311 TCCATCCACCGAATTCAGAGAAATA 59.870 40.000 6.22 0.00 0.00 1.40
1719 1781 4.080356 TCCATCCACCGAATTCAGAGAAAT 60.080 41.667 6.22 0.00 0.00 2.17
1720 1782 3.263170 TCCATCCACCGAATTCAGAGAAA 59.737 43.478 6.22 0.00 0.00 2.52
1721 1783 2.837591 TCCATCCACCGAATTCAGAGAA 59.162 45.455 6.22 0.00 0.00 2.87
1722 1784 2.466846 TCCATCCACCGAATTCAGAGA 58.533 47.619 6.22 0.00 0.00 3.10
1723 1785 2.988010 TCCATCCACCGAATTCAGAG 57.012 50.000 6.22 0.00 0.00 3.35
1724 1786 4.202357 CCTTATCCATCCACCGAATTCAGA 60.202 45.833 6.22 0.00 0.00 3.27
1725 1787 4.067896 CCTTATCCATCCACCGAATTCAG 58.932 47.826 6.22 0.00 0.00 3.02
1726 1788 3.458118 ACCTTATCCATCCACCGAATTCA 59.542 43.478 6.22 0.00 0.00 2.57
1727 1789 3.815401 CACCTTATCCATCCACCGAATTC 59.185 47.826 0.00 0.00 0.00 2.17
1728 1790 3.435026 CCACCTTATCCATCCACCGAATT 60.435 47.826 0.00 0.00 0.00 2.17
1729 1791 2.106511 CCACCTTATCCATCCACCGAAT 59.893 50.000 0.00 0.00 0.00 3.34
1730 1792 1.488812 CCACCTTATCCATCCACCGAA 59.511 52.381 0.00 0.00 0.00 4.30
1731 1793 1.128200 CCACCTTATCCATCCACCGA 58.872 55.000 0.00 0.00 0.00 4.69
1732 1794 1.128200 TCCACCTTATCCATCCACCG 58.872 55.000 0.00 0.00 0.00 4.94
1733 1795 3.884037 ATTCCACCTTATCCATCCACC 57.116 47.619 0.00 0.00 0.00 4.61
1734 1796 7.067494 GCATTATATTCCACCTTATCCATCCAC 59.933 40.741 0.00 0.00 0.00 4.02
1735 1797 7.036644 AGCATTATATTCCACCTTATCCATCCA 60.037 37.037 0.00 0.00 0.00 3.41
1736 1798 7.349598 AGCATTATATTCCACCTTATCCATCC 58.650 38.462 0.00 0.00 0.00 3.51
1737 1799 9.331282 GTAGCATTATATTCCACCTTATCCATC 57.669 37.037 0.00 0.00 0.00 3.51
1738 1800 8.835734 TGTAGCATTATATTCCACCTTATCCAT 58.164 33.333 0.00 0.00 0.00 3.41
1739 1801 8.213489 TGTAGCATTATATTCCACCTTATCCA 57.787 34.615 0.00 0.00 0.00 3.41
1740 1802 8.947115 GTTGTAGCATTATATTCCACCTTATCC 58.053 37.037 0.00 0.00 0.00 2.59
1741 1803 9.502091 TGTTGTAGCATTATATTCCACCTTATC 57.498 33.333 0.00 0.00 0.00 1.75
1742 1804 9.860650 TTGTTGTAGCATTATATTCCACCTTAT 57.139 29.630 0.00 0.00 0.00 1.73
1743 1805 9.116067 GTTGTTGTAGCATTATATTCCACCTTA 57.884 33.333 0.00 0.00 0.00 2.69
1744 1806 7.834181 AGTTGTTGTAGCATTATATTCCACCTT 59.166 33.333 0.00 0.00 0.00 3.50
1745 1807 7.283127 CAGTTGTTGTAGCATTATATTCCACCT 59.717 37.037 0.00 0.00 0.00 4.00
1746 1808 7.067008 ACAGTTGTTGTAGCATTATATTCCACC 59.933 37.037 0.00 0.00 38.56 4.61
1747 1809 7.985476 ACAGTTGTTGTAGCATTATATTCCAC 58.015 34.615 0.00 0.00 38.56 4.02
1748 1810 8.574251 AACAGTTGTTGTAGCATTATATTCCA 57.426 30.769 0.00 0.00 39.73 3.53
1752 1814 9.840427 GTTCAAACAGTTGTTGTAGCATTATAT 57.160 29.630 0.00 0.00 39.73 0.86
1756 1818 6.207691 AGTTCAAACAGTTGTTGTAGCATT 57.792 33.333 0.00 0.00 39.73 3.56
1769 1831 6.377327 AACAGACACCATAAGTTCAAACAG 57.623 37.500 0.00 0.00 0.00 3.16
1775 1837 8.788325 AATACCTAAACAGACACCATAAGTTC 57.212 34.615 0.00 0.00 0.00 3.01
1803 1866 0.614979 ACTCCAGGCCTCTTCGCTAA 60.615 55.000 0.00 0.00 0.00 3.09
1804 1867 0.257905 TACTCCAGGCCTCTTCGCTA 59.742 55.000 0.00 0.00 0.00 4.26
1805 1868 1.000486 TACTCCAGGCCTCTTCGCT 60.000 57.895 0.00 0.00 0.00 4.93
1806 1869 1.142097 GTACTCCAGGCCTCTTCGC 59.858 63.158 0.00 0.00 0.00 4.70
1807 1870 0.684805 AGGTACTCCAGGCCTCTTCG 60.685 60.000 0.00 0.00 35.89 3.79
1808 1871 0.827368 CAGGTACTCCAGGCCTCTTC 59.173 60.000 0.00 0.00 34.60 2.87
1809 1872 0.413832 TCAGGTACTCCAGGCCTCTT 59.586 55.000 0.00 0.00 34.60 2.85
1810 1873 0.639392 ATCAGGTACTCCAGGCCTCT 59.361 55.000 0.00 0.00 34.60 3.69
1831 1894 4.037923 GTCAGATTTCAGCAAAAACCCTCA 59.962 41.667 0.00 0.00 0.00 3.86
1832 1895 4.037923 TGTCAGATTTCAGCAAAAACCCTC 59.962 41.667 0.00 0.00 0.00 4.30
1839 1902 5.771153 TGTCATTGTCAGATTTCAGCAAA 57.229 34.783 0.00 0.00 0.00 3.68
1852 1915 6.254589 TCGAAAACCAAATTGTTGTCATTGTC 59.745 34.615 0.00 0.00 32.93 3.18
1854 1917 6.475076 TCTCGAAAACCAAATTGTTGTCATTG 59.525 34.615 0.00 0.00 32.93 2.82
1860 1923 7.845622 GTCAAATTCTCGAAAACCAAATTGTTG 59.154 33.333 0.00 0.00 34.25 3.33
1861 1924 7.547370 TGTCAAATTCTCGAAAACCAAATTGTT 59.453 29.630 0.00 0.00 0.00 2.83
1862 1925 7.038659 TGTCAAATTCTCGAAAACCAAATTGT 58.961 30.769 0.00 0.00 0.00 2.71
1870 1933 7.149192 CGGTGTAAATGTCAAATTCTCGAAAAC 60.149 37.037 0.00 0.00 0.00 2.43
1873 1936 5.697178 TCGGTGTAAATGTCAAATTCTCGAA 59.303 36.000 0.00 0.00 0.00 3.71
1875 1938 5.445939 CCTCGGTGTAAATGTCAAATTCTCG 60.446 44.000 0.00 0.00 0.00 4.04
1878 1941 4.083003 TGCCTCGGTGTAAATGTCAAATTC 60.083 41.667 0.00 0.00 0.00 2.17
1890 1953 2.301870 AGAACAAGAATGCCTCGGTGTA 59.698 45.455 0.00 0.00 29.85 2.90
1892 1955 1.466167 CAGAACAAGAATGCCTCGGTG 59.534 52.381 0.00 0.00 0.00 4.94
1895 1959 2.928757 CTCTCAGAACAAGAATGCCTCG 59.071 50.000 0.00 0.00 0.00 4.63
1901 1965 4.514441 CACTGTTGCTCTCAGAACAAGAAT 59.486 41.667 9.53 0.00 36.81 2.40
1906 1970 3.758755 ATCACTGTTGCTCTCAGAACA 57.241 42.857 9.53 0.00 36.81 3.18
1908 1972 3.405831 CCAATCACTGTTGCTCTCAGAA 58.594 45.455 9.53 0.38 36.81 3.02
1912 1976 1.467734 CTGCCAATCACTGTTGCTCTC 59.532 52.381 0.00 0.00 0.00 3.20
1914 1978 0.109412 GCTGCCAATCACTGTTGCTC 60.109 55.000 0.00 0.00 0.00 4.26
1918 1982 0.824595 TGCTGCTGCCAATCACTGTT 60.825 50.000 13.47 0.00 38.71 3.16
1919 1983 1.228337 TGCTGCTGCCAATCACTGT 60.228 52.632 13.47 0.00 38.71 3.55
1920 1984 1.241990 ACTGCTGCTGCCAATCACTG 61.242 55.000 13.47 0.00 38.71 3.66
1921 1985 0.325933 TACTGCTGCTGCCAATCACT 59.674 50.000 13.47 0.00 38.71 3.41
1922 1986 1.167851 TTACTGCTGCTGCCAATCAC 58.832 50.000 13.47 0.00 38.71 3.06
1923 1987 2.133281 ATTACTGCTGCTGCCAATCA 57.867 45.000 13.47 0.00 38.71 2.57
1924 1988 2.165030 ACAATTACTGCTGCTGCCAATC 59.835 45.455 13.47 0.00 38.71 2.67
1925 1989 2.165030 GACAATTACTGCTGCTGCCAAT 59.835 45.455 13.47 7.16 38.71 3.16
1926 1990 1.541147 GACAATTACTGCTGCTGCCAA 59.459 47.619 13.47 5.09 38.71 4.52
1927 1991 1.167851 GACAATTACTGCTGCTGCCA 58.832 50.000 13.47 0.56 38.71 4.92
1928 1992 1.131883 CTGACAATTACTGCTGCTGCC 59.868 52.381 13.47 0.00 38.71 4.85
1929 1993 2.079158 TCTGACAATTACTGCTGCTGC 58.921 47.619 8.89 8.89 40.20 5.25
1930 1994 4.959596 ATTCTGACAATTACTGCTGCTG 57.040 40.909 4.89 4.89 0.00 4.41
1931 1995 6.039047 CCAATATTCTGACAATTACTGCTGCT 59.961 38.462 0.00 0.00 0.00 4.24
1932 1996 6.183360 ACCAATATTCTGACAATTACTGCTGC 60.183 38.462 0.00 0.00 0.00 5.25
1933 1997 7.066163 TCACCAATATTCTGACAATTACTGCTG 59.934 37.037 0.00 0.00 0.00 4.41
1947 2011 6.855763 TTCAGGCAAATTCACCAATATTCT 57.144 33.333 0.02 0.00 0.00 2.40
1974 2038 7.648112 GGGAAATACGAAAATAAAGAATGCTCC 59.352 37.037 0.00 0.00 0.00 4.70
1990 2070 2.785562 CCAACAAGTGGGGAAATACGA 58.214 47.619 0.00 0.00 44.64 3.43
2002 2082 8.514594 CAGATTAATATGTCACAACCAACAAGT 58.485 33.333 1.78 0.00 0.00 3.16
2003 2083 7.485913 GCAGATTAATATGTCACAACCAACAAG 59.514 37.037 11.51 0.00 0.00 3.16
2011 2091 9.098355 GTTACTGAGCAGATTAATATGTCACAA 57.902 33.333 11.51 6.46 0.00 3.33
2013 2093 8.879342 AGTTACTGAGCAGATTAATATGTCAC 57.121 34.615 11.51 4.11 0.00 3.67
2030 2110 9.119418 TGACATGAAAGAATTGAAAGTTACTGA 57.881 29.630 0.00 0.00 0.00 3.41
2036 2116 7.572523 TCAGTGACATGAAAGAATTGAAAGT 57.427 32.000 0.00 0.00 0.00 2.66
2037 2117 6.581542 GCTCAGTGACATGAAAGAATTGAAAG 59.418 38.462 0.00 0.00 0.00 2.62
2038 2118 6.039605 TGCTCAGTGACATGAAAGAATTGAAA 59.960 34.615 0.00 0.00 0.00 2.69
2039 2119 5.532032 TGCTCAGTGACATGAAAGAATTGAA 59.468 36.000 0.00 0.00 0.00 2.69
2040 2120 5.065235 TGCTCAGTGACATGAAAGAATTGA 58.935 37.500 0.00 0.00 0.00 2.57
2041 2121 5.366829 TGCTCAGTGACATGAAAGAATTG 57.633 39.130 0.00 0.00 0.00 2.32
2042 2122 6.183360 GCTATGCTCAGTGACATGAAAGAATT 60.183 38.462 14.65 0.00 0.00 2.17
2043 2123 5.296283 GCTATGCTCAGTGACATGAAAGAAT 59.704 40.000 14.65 0.00 0.00 2.40
2044 2124 4.633126 GCTATGCTCAGTGACATGAAAGAA 59.367 41.667 14.65 0.00 0.00 2.52
2045 2125 4.186926 GCTATGCTCAGTGACATGAAAGA 58.813 43.478 14.65 0.00 0.00 2.52
2046 2126 3.937079 TGCTATGCTCAGTGACATGAAAG 59.063 43.478 14.65 8.18 0.00 2.62
2047 2127 3.941573 TGCTATGCTCAGTGACATGAAA 58.058 40.909 14.65 0.00 0.00 2.69
2048 2128 3.615224 TGCTATGCTCAGTGACATGAA 57.385 42.857 14.65 0.00 0.00 2.57
2049 2129 3.615224 TTGCTATGCTCAGTGACATGA 57.385 42.857 14.65 0.00 0.00 3.07
2050 2130 3.064958 CCTTTGCTATGCTCAGTGACATG 59.935 47.826 14.65 0.00 0.00 3.21
2051 2131 3.276857 CCTTTGCTATGCTCAGTGACAT 58.723 45.455 11.34 11.34 0.00 3.06
2052 2132 2.038952 ACCTTTGCTATGCTCAGTGACA 59.961 45.455 0.00 0.00 0.00 3.58
2053 2133 2.704572 ACCTTTGCTATGCTCAGTGAC 58.295 47.619 0.00 0.00 0.00 3.67
2054 2134 4.445453 CATACCTTTGCTATGCTCAGTGA 58.555 43.478 0.00 0.00 0.00 3.41
2055 2135 3.562973 CCATACCTTTGCTATGCTCAGTG 59.437 47.826 0.00 0.00 0.00 3.66
2079 2159 3.545703 ACTATCACTGCCATACCTTTGC 58.454 45.455 0.00 0.00 0.00 3.68
2080 2160 5.635280 CGATACTATCACTGCCATACCTTTG 59.365 44.000 0.00 0.00 0.00 2.77
2081 2161 5.538813 TCGATACTATCACTGCCATACCTTT 59.461 40.000 0.00 0.00 0.00 3.11
2082 2162 5.047943 GTCGATACTATCACTGCCATACCTT 60.048 44.000 0.00 0.00 0.00 3.50
2084 2164 4.672024 CGTCGATACTATCACTGCCATACC 60.672 50.000 0.00 0.00 0.00 2.73
2085 2165 4.083431 ACGTCGATACTATCACTGCCATAC 60.083 45.833 0.00 0.00 0.00 2.39
2086 2166 4.070009 ACGTCGATACTATCACTGCCATA 58.930 43.478 0.00 0.00 0.00 2.74
2087 2167 2.885266 ACGTCGATACTATCACTGCCAT 59.115 45.455 0.00 0.00 0.00 4.40
2088 2168 2.294979 ACGTCGATACTATCACTGCCA 58.705 47.619 0.00 0.00 0.00 4.92
2089 2169 4.478843 TTACGTCGATACTATCACTGCC 57.521 45.455 0.00 0.00 0.00 4.85
2090 2170 5.164177 GCAATTACGTCGATACTATCACTGC 60.164 44.000 0.00 0.00 0.00 4.40
2091 2171 5.912955 TGCAATTACGTCGATACTATCACTG 59.087 40.000 0.00 0.00 0.00 3.66
2092 2172 6.068473 TGCAATTACGTCGATACTATCACT 57.932 37.500 0.00 0.00 0.00 3.41
2093 2173 5.164177 GCTGCAATTACGTCGATACTATCAC 60.164 44.000 0.00 0.00 0.00 3.06
2094 2174 4.915667 GCTGCAATTACGTCGATACTATCA 59.084 41.667 0.00 0.00 0.00 2.15
2095 2175 5.154932 AGCTGCAATTACGTCGATACTATC 58.845 41.667 1.02 0.00 0.00 2.08
2099 2179 5.629849 AGAATAGCTGCAATTACGTCGATAC 59.370 40.000 1.02 0.00 0.00 2.24
2106 2186 6.912051 TGCAATAAAGAATAGCTGCAATTACG 59.088 34.615 1.02 0.00 36.89 3.18
2112 2192 7.572523 ATTACTGCAATAAAGAATAGCTGCA 57.427 32.000 1.02 0.00 37.46 4.41
2113 2193 7.917505 ACAATTACTGCAATAAAGAATAGCTGC 59.082 33.333 0.00 0.00 0.00 5.25
2114 2194 9.793252 AACAATTACTGCAATAAAGAATAGCTG 57.207 29.630 0.00 0.00 0.00 4.24
2149 2229 9.618890 ACATACAACAATTATTACTGAGCAGAT 57.381 29.630 4.21 0.00 0.00 2.90
2152 2232 8.785329 TGACATACAACAATTATTACTGAGCA 57.215 30.769 0.00 0.00 0.00 4.26
2185 2386 7.093814 ACTGACACCATTTACATATGCAACATT 60.094 33.333 1.58 0.00 0.00 2.71
2199 2400 8.091449 TCAAAAACTGTTTTACTGACACCATTT 58.909 29.630 17.97 0.00 35.12 2.32
2308 2509 7.391554 CACTCCAGAAAAATAAGTCATCCTGAA 59.608 37.037 0.00 0.00 0.00 3.02
2309 2510 6.881065 CACTCCAGAAAAATAAGTCATCCTGA 59.119 38.462 0.00 0.00 0.00 3.86
2311 2512 6.784031 ACACTCCAGAAAAATAAGTCATCCT 58.216 36.000 0.00 0.00 0.00 3.24
2316 2517 7.119407 GGTAGGAACACTCCAGAAAAATAAGTC 59.881 40.741 0.00 0.00 45.24 3.01
2352 2553 6.550371 ACGACGTGAGAAAACGAATTATAG 57.450 37.500 0.00 0.00 46.49 1.31
2356 2557 4.525411 AAACGACGTGAGAAAACGAATT 57.475 36.364 0.00 0.00 46.49 2.17
2357 2558 4.525411 AAAACGACGTGAGAAAACGAAT 57.475 36.364 0.00 0.00 46.49 3.34
2358 2559 3.995412 AAAACGACGTGAGAAAACGAA 57.005 38.095 0.00 0.00 46.49 3.85
2360 2561 4.886153 GCGAAAAACGACGTGAGAAAACG 61.886 47.826 0.00 3.26 45.77 3.60
2361 2562 2.457894 GCGAAAAACGACGTGAGAAAAC 59.542 45.455 0.00 0.00 45.77 2.43
2363 2564 1.659601 TGCGAAAAACGACGTGAGAAA 59.340 42.857 0.00 0.00 45.77 2.52
2368 2569 1.041726 CCATTGCGAAAAACGACGTG 58.958 50.000 0.00 0.00 45.77 4.49
2370 2571 1.706597 GAACCATTGCGAAAAACGACG 59.293 47.619 0.00 0.00 45.77 5.12
2371 2572 2.048498 GGAACCATTGCGAAAAACGAC 58.952 47.619 0.00 0.00 45.77 4.34
2372 2573 1.676529 TGGAACCATTGCGAAAAACGA 59.323 42.857 0.00 0.00 45.77 3.85
2374 2575 8.419076 AATATAATGGAACCATTGCGAAAAAC 57.581 30.769 24.01 0.00 45.15 2.43
2375 2576 8.877779 CAAATATAATGGAACCATTGCGAAAAA 58.122 29.630 24.01 7.23 45.15 1.94
2376 2577 8.037758 ACAAATATAATGGAACCATTGCGAAAA 58.962 29.630 24.01 7.84 45.15 2.29
2377 2578 7.551585 ACAAATATAATGGAACCATTGCGAAA 58.448 30.769 24.01 8.46 45.15 3.46
2379 2580 6.319911 TGACAAATATAATGGAACCATTGCGA 59.680 34.615 24.01 12.28 45.15 5.10
2380 2581 6.502652 TGACAAATATAATGGAACCATTGCG 58.497 36.000 24.01 11.15 45.15 4.85
2385 2586 8.685427 CACAGAATGACAAATATAATGGAACCA 58.315 33.333 0.00 0.00 39.69 3.67
2386 2587 8.137437 CCACAGAATGACAAATATAATGGAACC 58.863 37.037 0.00 0.00 39.69 3.62
2387 2588 8.686334 ACCACAGAATGACAAATATAATGGAAC 58.314 33.333 0.00 0.00 39.69 3.62
2388 2589 8.685427 CACCACAGAATGACAAATATAATGGAA 58.315 33.333 0.00 0.00 39.69 3.53
2392 2858 9.905713 AGTACACCACAGAATGACAAATATAAT 57.094 29.630 0.00 0.00 39.69 1.28
2426 2892 3.988976 AGTATGCACAGACAAGATGGT 57.011 42.857 0.00 0.00 0.00 3.55
2447 2913 7.841729 ACAGAATAGTTATCTCTCCTGGAAGAA 59.158 37.037 11.01 0.00 34.07 2.52
2458 2924 8.885494 AGAAGATGCAACAGAATAGTTATCTC 57.115 34.615 0.00 0.00 29.80 2.75
2491 2957 5.335113 GCAGTTGACAAATGACAGAGCAATA 60.335 40.000 19.19 0.00 0.00 1.90
2493 2959 3.243168 GCAGTTGACAAATGACAGAGCAA 60.243 43.478 19.19 0.00 0.00 3.91
2521 2987 3.296628 GAAACTGTTACCATGTGCAACG 58.703 45.455 0.00 0.00 42.39 4.10
2529 2995 7.862675 AGCTTATAGAAGGAAACTGTTACCAT 58.137 34.615 0.00 0.00 42.68 3.55
2530 2996 7.253905 AGCTTATAGAAGGAAACTGTTACCA 57.746 36.000 0.00 0.00 42.68 3.25
2550 3016 5.104610 AGTGGTCACAGATCATGATTAGCTT 60.105 40.000 10.14 0.00 0.00 3.74
2638 3104 6.155737 TGCAGATATCATGCTACTGGATATGT 59.844 38.462 20.51 0.00 44.17 2.29


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.