Multiple sequence alignment - TraesCS2A01G010300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G010300 chr2A 100.000 5342 0 0 1 5342 4036732 4042073 0.000000e+00 9865.0
1 TraesCS2A01G010300 chr2A 79.103 2431 447 39 1971 4360 2334734 2337144 0.000000e+00 1618.0
2 TraesCS2A01G010300 chr2A 79.390 2329 426 41 2067 4361 3976140 3978448 0.000000e+00 1592.0
3 TraesCS2A01G010300 chr2A 82.490 1028 166 13 1032 2050 3974959 3975981 0.000000e+00 889.0
4 TraesCS2A01G010300 chr2D 93.813 4946 279 18 398 5342 5388186 5393105 0.000000e+00 7413.0
5 TraesCS2A01G010300 chr2D 78.984 2422 449 38 1971 4348 2342125 2344530 0.000000e+00 1598.0
6 TraesCS2A01G010300 chr2D 79.065 1347 245 25 794 2122 11427046 11425719 0.000000e+00 891.0
7 TraesCS2A01G010300 chr2D 89.333 150 13 3 482 631 11427339 11427193 9.140000e-43 185.0
8 TraesCS2A01G010300 chr2D 77.044 318 47 18 4812 5110 121733173 121732863 5.540000e-35 159.0
9 TraesCS2A01G010300 chr2B 91.808 4529 308 19 631 5117 6040661 6036154 0.000000e+00 6250.0
10 TraesCS2A01G010300 chr2B 92.953 4229 268 14 572 4788 6140379 6136169 0.000000e+00 6131.0
11 TraesCS2A01G010300 chr2B 84.486 1128 166 8 1001 2122 6159869 6158745 0.000000e+00 1105.0
12 TraesCS2A01G010300 chr2B 77.868 1360 253 36 794 2122 17831319 17829977 0.000000e+00 800.0
13 TraesCS2A01G010300 chr2B 91.065 291 26 0 4 294 800757539 800757249 1.390000e-105 394.0
14 TraesCS2A01G010300 chr2B 85.425 247 16 7 408 636 6043018 6042774 6.910000e-59 239.0
15 TraesCS2A01G010300 chr2B 83.577 274 18 12 398 646 6140662 6140391 1.160000e-56 231.0
16 TraesCS2A01G010300 chr2B 95.714 140 5 1 5139 5277 6035943 6035804 1.940000e-54 224.0
17 TraesCS2A01G010300 chr2B 85.526 228 6 5 5119 5342 6135682 6135478 4.190000e-51 213.0
18 TraesCS2A01G010300 chr2B 93.443 61 4 0 465 525 17833272 17833212 2.050000e-14 91.6
19 TraesCS2A01G010300 chr2B 100.000 33 0 0 5310 5342 6035749 6035717 1.610000e-05 62.1
20 TraesCS2A01G010300 chr4B 78.959 2652 513 39 1721 4357 6039929 6042550 0.000000e+00 1764.0
21 TraesCS2A01G010300 chr4B 78.583 2554 495 44 1791 4307 4953649 4951111 0.000000e+00 1639.0
22 TraesCS2A01G010300 chr4B 91.837 294 24 0 1 294 670049511 670049218 1.380000e-110 411.0
23 TraesCS2A01G010300 chr4B 92.366 131 8 2 4500 4629 372359198 372359069 9.140000e-43 185.0
24 TraesCS2A01G010300 chr4B 76.210 248 55 3 1721 1966 6040073 6040318 1.560000e-25 128.0
25 TraesCS2A01G010300 chr4D 79.849 2119 403 22 1780 3887 3713942 3716047 0.000000e+00 1526.0
26 TraesCS2A01G010300 chr5B 91.497 294 25 0 1 294 432275505 432275212 6.440000e-109 405.0
27 TraesCS2A01G010300 chr5B 89.855 138 14 0 4492 4629 161033523 161033386 1.530000e-40 178.0
28 TraesCS2A01G010300 chr3B 91.156 294 26 0 1 294 50029768 50029475 3.000000e-107 399.0
29 TraesCS2A01G010300 chr3B 88.742 151 14 2 4479 4629 124590382 124590235 1.180000e-41 182.0
30 TraesCS2A01G010300 chr7B 90.816 294 27 0 1 294 736041904 736042197 1.390000e-105 394.0
31 TraesCS2A01G010300 chr7B 91.971 137 9 2 4494 4629 233419802 233419937 1.960000e-44 191.0
32 TraesCS2A01G010300 chr3A 90.816 294 27 0 1 294 601394025 601393732 1.390000e-105 394.0
33 TraesCS2A01G010300 chr5D 90.476 294 28 0 1 294 543745264 543744971 6.490000e-104 388.0
34 TraesCS2A01G010300 chr1B 90.476 294 28 0 1 294 649662069 649662362 6.490000e-104 388.0
35 TraesCS2A01G010300 chr6A 90.136 294 29 0 1 294 455730541 455730834 3.020000e-102 383.0
36 TraesCS2A01G010300 chr7D 75.066 758 176 11 1421 2170 631685248 631686000 1.840000e-89 340.0
37 TraesCS2A01G010300 chr7D 74.307 541 127 12 1636 2170 631685754 631686288 9.010000e-53 219.0
38 TraesCS2A01G010300 chr7D 78.641 309 48 13 4812 5110 79947584 79947884 7.060000e-44 189.0
39 TraesCS2A01G010300 chr7D 87.417 151 18 1 4479 4629 91140379 91140230 7.110000e-39 172.0
40 TraesCS2A01G010300 chr7D 75.575 348 79 6 1826 2170 631685800 631686144 3.310000e-37 167.0
41 TraesCS2A01G010300 chr7A 74.967 759 175 13 1421 2170 736692398 736691646 8.570000e-88 335.0
42 TraesCS2A01G010300 chr5A 88.000 150 17 1 4479 4628 494282092 494282240 5.500000e-40 176.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G010300 chr2A 4036732 4042073 5341 False 9865.000000 9865 100.000000 1 5342 1 chr2A.!!$F2 5341
1 TraesCS2A01G010300 chr2A 2334734 2337144 2410 False 1618.000000 1618 79.103000 1971 4360 1 chr2A.!!$F1 2389
2 TraesCS2A01G010300 chr2A 3974959 3978448 3489 False 1240.500000 1592 80.940000 1032 4361 2 chr2A.!!$F3 3329
3 TraesCS2A01G010300 chr2D 5388186 5393105 4919 False 7413.000000 7413 93.813000 398 5342 1 chr2D.!!$F2 4944
4 TraesCS2A01G010300 chr2D 2342125 2344530 2405 False 1598.000000 1598 78.984000 1971 4348 1 chr2D.!!$F1 2377
5 TraesCS2A01G010300 chr2D 11425719 11427339 1620 True 538.000000 891 84.199000 482 2122 2 chr2D.!!$R2 1640
6 TraesCS2A01G010300 chr2B 6135478 6140662 5184 True 2191.666667 6131 87.352000 398 5342 3 chr2B.!!$R4 4944
7 TraesCS2A01G010300 chr2B 6035717 6043018 7301 True 1693.775000 6250 93.236750 408 5342 4 chr2B.!!$R3 4934
8 TraesCS2A01G010300 chr2B 6158745 6159869 1124 True 1105.000000 1105 84.486000 1001 2122 1 chr2B.!!$R1 1121
9 TraesCS2A01G010300 chr2B 17829977 17833272 3295 True 445.800000 800 85.655500 465 2122 2 chr2B.!!$R5 1657
10 TraesCS2A01G010300 chr4B 4951111 4953649 2538 True 1639.000000 1639 78.583000 1791 4307 1 chr4B.!!$R1 2516
11 TraesCS2A01G010300 chr4B 6039929 6042550 2621 False 946.000000 1764 77.584500 1721 4357 2 chr4B.!!$F1 2636
12 TraesCS2A01G010300 chr4D 3713942 3716047 2105 False 1526.000000 1526 79.849000 1780 3887 1 chr4D.!!$F1 2107
13 TraesCS2A01G010300 chr7D 631685248 631686288 1040 False 242.000000 340 74.982667 1421 2170 3 chr7D.!!$F2 749
14 TraesCS2A01G010300 chr7A 736691646 736692398 752 True 335.000000 335 74.967000 1421 2170 1 chr7A.!!$R1 749

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
346 347 0.032267 CTAGGGCGCTACAGCTAACC 59.968 60.000 7.64 0.0 39.32 2.85 F
371 372 0.034896 CAGTAGCGGTGGTTTGACCT 59.965 55.000 0.00 0.0 39.58 3.85 F
1230 5216 0.038251 TCGAGTGCAGCAAGTACCAG 60.038 55.000 0.00 0.0 32.67 4.00 F
2543 7036 0.323725 AGTATGGGGCAGCTGTTTGG 60.324 55.000 16.64 0.0 0.00 3.28 F
2595 7088 1.352352 CTTGAAGGGGAGCTTCCAAGA 59.648 52.381 14.70 0.0 38.64 3.02 F
3126 7619 1.558294 CCCCCTTGTAGTAGTCCAACC 59.442 57.143 0.00 0.0 0.00 3.77 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2327 6820 0.034059 ACGAACTCTGACCAGGCTTG 59.966 55.000 0.00 0.00 0.00 4.01 R
2334 6827 4.307432 TCATTTCAAGACGAACTCTGACC 58.693 43.478 0.00 0.00 31.73 4.02 R
2942 7435 0.107703 TGACGATGGGATCAAGCCAC 60.108 55.000 0.00 0.00 0.00 5.01 R
3357 7850 0.538118 CCCCTGTTCCAATGCAATGG 59.462 55.000 15.12 15.12 42.12 3.16 R
3767 8260 1.009829 GTCCGAAATGCAAGCTCGAT 58.990 50.000 14.78 0.00 34.52 3.59 R
4931 9559 0.242017 GGCGGGCATCTTCATATTGC 59.758 55.000 0.00 0.00 35.64 3.56 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 6.395426 TGATGAAATATGTCAATCCAAGGC 57.605 37.500 0.00 0.00 0.00 4.35
25 26 4.898829 TGAAATATGTCAATCCAAGGCG 57.101 40.909 0.00 0.00 0.00 5.52
26 27 3.631686 TGAAATATGTCAATCCAAGGCGG 59.368 43.478 0.00 0.00 0.00 6.13
27 28 1.609208 ATATGTCAATCCAAGGCGGC 58.391 50.000 0.00 0.00 33.14 6.53
28 29 0.546122 TATGTCAATCCAAGGCGGCT 59.454 50.000 5.25 5.25 33.14 5.52
29 30 0.749454 ATGTCAATCCAAGGCGGCTC 60.749 55.000 13.70 0.00 33.14 4.70
30 31 2.115291 GTCAATCCAAGGCGGCTCC 61.115 63.158 13.70 0.00 33.14 4.70
31 32 2.045045 CAATCCAAGGCGGCTCCA 60.045 61.111 13.70 0.00 37.29 3.86
32 33 2.044946 AATCCAAGGCGGCTCCAC 60.045 61.111 13.70 0.00 37.29 4.02
33 34 2.905996 AATCCAAGGCGGCTCCACA 61.906 57.895 13.70 0.00 37.29 4.17
34 35 2.215451 AATCCAAGGCGGCTCCACAT 62.215 55.000 13.70 0.00 37.29 3.21
35 36 1.344953 ATCCAAGGCGGCTCCACATA 61.345 55.000 13.70 0.00 37.29 2.29
36 37 1.149174 CCAAGGCGGCTCCACATAT 59.851 57.895 13.70 0.00 37.29 1.78
37 38 0.886490 CCAAGGCGGCTCCACATATC 60.886 60.000 13.70 0.00 37.29 1.63
38 39 0.107456 CAAGGCGGCTCCACATATCT 59.893 55.000 13.70 0.00 37.29 1.98
39 40 0.394565 AAGGCGGCTCCACATATCTC 59.605 55.000 13.70 0.00 37.29 2.75
40 41 0.470833 AGGCGGCTCCACATATCTCT 60.471 55.000 5.25 0.00 37.29 3.10
41 42 0.037790 GGCGGCTCCACATATCTCTC 60.038 60.000 0.00 0.00 34.01 3.20
42 43 0.387878 GCGGCTCCACATATCTCTCG 60.388 60.000 0.00 0.00 0.00 4.04
43 44 1.239347 CGGCTCCACATATCTCTCGA 58.761 55.000 0.00 0.00 0.00 4.04
44 45 1.198867 CGGCTCCACATATCTCTCGAG 59.801 57.143 5.93 5.93 0.00 4.04
45 46 2.235016 GGCTCCACATATCTCTCGAGT 58.765 52.381 13.13 0.00 0.00 4.18
46 47 2.030363 GGCTCCACATATCTCTCGAGTG 60.030 54.545 13.13 10.53 0.00 3.51
47 48 2.881513 GCTCCACATATCTCTCGAGTGA 59.118 50.000 18.65 18.65 32.14 3.41
48 49 3.316588 GCTCCACATATCTCTCGAGTGAA 59.683 47.826 20.04 10.60 32.14 3.18
49 50 4.022416 GCTCCACATATCTCTCGAGTGAAT 60.022 45.833 20.04 12.17 32.14 2.57
50 51 5.182190 GCTCCACATATCTCTCGAGTGAATA 59.818 44.000 20.04 12.49 32.14 1.75
51 52 6.561737 TCCACATATCTCTCGAGTGAATAC 57.438 41.667 20.04 0.00 32.14 1.89
52 53 6.062095 TCCACATATCTCTCGAGTGAATACA 58.938 40.000 20.04 7.43 32.14 2.29
53 54 6.017026 TCCACATATCTCTCGAGTGAATACAC 60.017 42.308 20.04 0.00 46.24 2.90
68 69 7.166628 GTGAATACACGTGAAGAATAGATGG 57.833 40.000 25.01 0.00 37.28 3.51
69 70 6.757010 GTGAATACACGTGAAGAATAGATGGT 59.243 38.462 25.01 0.00 37.28 3.55
70 71 6.756542 TGAATACACGTGAAGAATAGATGGTG 59.243 38.462 25.01 0.00 0.00 4.17
71 72 4.537135 ACACGTGAAGAATAGATGGTGT 57.463 40.909 25.01 0.00 32.98 4.16
72 73 5.654603 ACACGTGAAGAATAGATGGTGTA 57.345 39.130 25.01 0.00 35.79 2.90
73 74 6.222038 ACACGTGAAGAATAGATGGTGTAT 57.778 37.500 25.01 0.00 35.79 2.29
74 75 7.342769 ACACGTGAAGAATAGATGGTGTATA 57.657 36.000 25.01 0.00 35.79 1.47
75 76 7.952671 ACACGTGAAGAATAGATGGTGTATAT 58.047 34.615 25.01 0.00 35.79 0.86
76 77 8.082852 ACACGTGAAGAATAGATGGTGTATATC 58.917 37.037 25.01 0.00 35.79 1.63
77 78 8.300286 CACGTGAAGAATAGATGGTGTATATCT 58.700 37.037 10.90 0.00 38.40 1.98
78 79 8.861086 ACGTGAAGAATAGATGGTGTATATCTT 58.139 33.333 0.00 0.00 36.38 2.40
79 80 9.347934 CGTGAAGAATAGATGGTGTATATCTTC 57.652 37.037 0.00 0.00 36.38 2.87
84 85 8.748412 AGAATAGATGGTGTATATCTTCAGAGC 58.252 37.037 0.00 0.00 36.38 4.09
85 86 8.663209 AATAGATGGTGTATATCTTCAGAGCT 57.337 34.615 0.00 0.00 36.38 4.09
86 87 6.588719 AGATGGTGTATATCTTCAGAGCTC 57.411 41.667 5.27 5.27 30.98 4.09
87 88 6.314120 AGATGGTGTATATCTTCAGAGCTCT 58.686 40.000 11.45 11.45 30.98 4.09
88 89 5.781210 TGGTGTATATCTTCAGAGCTCTG 57.219 43.478 33.73 33.73 45.08 3.35
99 100 3.422417 CAGAGCTCTGATGGCAAATTG 57.578 47.619 35.69 7.34 46.59 2.32
100 101 2.099263 CAGAGCTCTGATGGCAAATTGG 59.901 50.000 35.69 6.17 46.59 3.16
101 102 1.407979 GAGCTCTGATGGCAAATTGGG 59.592 52.381 6.43 0.00 0.00 4.12
102 103 0.179092 GCTCTGATGGCAAATTGGGC 60.179 55.000 0.00 0.00 0.00 5.36
104 105 0.896923 TCTGATGGCAAATTGGGCAC 59.103 50.000 11.93 6.62 46.76 5.01
118 119 4.259952 GCACCCTCTAATTGCCCC 57.740 61.111 0.00 0.00 0.00 5.80
119 120 1.823899 GCACCCTCTAATTGCCCCG 60.824 63.158 0.00 0.00 0.00 5.73
120 121 1.912220 CACCCTCTAATTGCCCCGA 59.088 57.895 0.00 0.00 0.00 5.14
121 122 0.463833 CACCCTCTAATTGCCCCGAC 60.464 60.000 0.00 0.00 0.00 4.79
122 123 1.227556 CCCTCTAATTGCCCCGACG 60.228 63.158 0.00 0.00 0.00 5.12
123 124 1.520666 CCTCTAATTGCCCCGACGT 59.479 57.895 0.00 0.00 0.00 4.34
124 125 0.810031 CCTCTAATTGCCCCGACGTG 60.810 60.000 0.00 0.00 0.00 4.49
125 126 0.108329 CTCTAATTGCCCCGACGTGT 60.108 55.000 0.00 0.00 0.00 4.49
126 127 0.108520 TCTAATTGCCCCGACGTGTC 60.109 55.000 0.00 0.00 0.00 3.67
127 128 0.108329 CTAATTGCCCCGACGTGTCT 60.108 55.000 0.00 0.00 0.00 3.41
128 129 1.135527 CTAATTGCCCCGACGTGTCTA 59.864 52.381 0.00 0.00 0.00 2.59
129 130 0.539986 AATTGCCCCGACGTGTCTAT 59.460 50.000 0.00 0.00 0.00 1.98
130 131 0.539986 ATTGCCCCGACGTGTCTATT 59.460 50.000 0.00 0.00 0.00 1.73
131 132 1.184431 TTGCCCCGACGTGTCTATTA 58.816 50.000 0.00 0.00 0.00 0.98
132 133 0.742505 TGCCCCGACGTGTCTATTAG 59.257 55.000 0.00 0.00 0.00 1.73
133 134 0.596859 GCCCCGACGTGTCTATTAGC 60.597 60.000 0.00 0.00 0.00 3.09
134 135 0.317603 CCCCGACGTGTCTATTAGCG 60.318 60.000 0.00 0.00 0.00 4.26
135 136 0.659427 CCCGACGTGTCTATTAGCGA 59.341 55.000 0.00 0.00 0.00 4.93
136 137 1.333881 CCCGACGTGTCTATTAGCGAG 60.334 57.143 0.00 0.00 0.00 5.03
137 138 1.386961 CGACGTGTCTATTAGCGAGC 58.613 55.000 0.00 0.00 0.00 5.03
138 139 1.267882 CGACGTGTCTATTAGCGAGCA 60.268 52.381 0.00 0.00 0.00 4.26
139 140 2.602456 CGACGTGTCTATTAGCGAGCAT 60.602 50.000 0.00 0.00 0.00 3.79
140 141 3.363673 CGACGTGTCTATTAGCGAGCATA 60.364 47.826 0.00 0.00 0.00 3.14
141 142 3.886549 ACGTGTCTATTAGCGAGCATAC 58.113 45.455 0.00 0.00 0.00 2.39
142 143 3.235195 CGTGTCTATTAGCGAGCATACC 58.765 50.000 0.00 0.00 0.00 2.73
143 144 3.058155 CGTGTCTATTAGCGAGCATACCT 60.058 47.826 0.00 0.00 0.00 3.08
144 145 4.556898 CGTGTCTATTAGCGAGCATACCTT 60.557 45.833 0.00 0.00 0.00 3.50
145 146 5.290386 GTGTCTATTAGCGAGCATACCTTT 58.710 41.667 0.00 0.00 0.00 3.11
146 147 5.753921 GTGTCTATTAGCGAGCATACCTTTT 59.246 40.000 0.00 0.00 0.00 2.27
147 148 6.921857 GTGTCTATTAGCGAGCATACCTTTTA 59.078 38.462 0.00 0.00 0.00 1.52
148 149 7.115095 GTGTCTATTAGCGAGCATACCTTTTAG 59.885 40.741 0.00 0.00 0.00 1.85
149 150 6.586844 GTCTATTAGCGAGCATACCTTTTAGG 59.413 42.308 0.00 0.00 42.49 2.69
150 151 2.622064 AGCGAGCATACCTTTTAGGG 57.378 50.000 0.00 0.00 40.58 3.53
151 152 1.141053 AGCGAGCATACCTTTTAGGGG 59.859 52.381 0.00 0.00 40.58 4.79
152 153 1.594331 CGAGCATACCTTTTAGGGGC 58.406 55.000 0.00 0.00 40.58 5.80
153 154 1.134220 CGAGCATACCTTTTAGGGGCA 60.134 52.381 0.00 0.00 40.58 5.36
154 155 2.576615 GAGCATACCTTTTAGGGGCAG 58.423 52.381 0.00 0.00 40.58 4.85
155 156 2.172717 GAGCATACCTTTTAGGGGCAGA 59.827 50.000 0.00 0.00 40.58 4.26
156 157 2.580783 AGCATACCTTTTAGGGGCAGAA 59.419 45.455 0.00 0.00 40.58 3.02
157 158 3.205282 AGCATACCTTTTAGGGGCAGAAT 59.795 43.478 0.00 0.00 40.58 2.40
158 159 3.960755 GCATACCTTTTAGGGGCAGAATT 59.039 43.478 0.00 0.00 40.58 2.17
159 160 4.038042 GCATACCTTTTAGGGGCAGAATTC 59.962 45.833 0.00 0.00 40.58 2.17
160 161 3.101643 ACCTTTTAGGGGCAGAATTCC 57.898 47.619 0.65 0.00 40.58 3.01
161 162 2.381961 ACCTTTTAGGGGCAGAATTCCA 59.618 45.455 0.65 0.00 40.58 3.53
162 163 3.012844 ACCTTTTAGGGGCAGAATTCCAT 59.987 43.478 0.65 0.00 40.58 3.41
163 164 3.385755 CCTTTTAGGGGCAGAATTCCATG 59.614 47.826 0.65 0.00 0.00 3.66
164 165 3.756082 TTTAGGGGCAGAATTCCATGT 57.244 42.857 0.65 0.00 0.00 3.21
165 166 4.871871 TTTAGGGGCAGAATTCCATGTA 57.128 40.909 0.65 0.00 0.00 2.29
166 167 4.437682 TTAGGGGCAGAATTCCATGTAG 57.562 45.455 0.65 0.00 0.00 2.74
167 168 2.208872 AGGGGCAGAATTCCATGTAGT 58.791 47.619 0.65 0.00 0.00 2.73
168 169 3.393687 AGGGGCAGAATTCCATGTAGTA 58.606 45.455 0.65 0.00 0.00 1.82
169 170 3.785887 AGGGGCAGAATTCCATGTAGTAA 59.214 43.478 0.65 0.00 0.00 2.24
170 171 4.229582 AGGGGCAGAATTCCATGTAGTAAA 59.770 41.667 0.65 0.00 0.00 2.01
171 172 4.338400 GGGGCAGAATTCCATGTAGTAAAC 59.662 45.833 0.65 0.00 0.00 2.01
172 173 4.947388 GGGCAGAATTCCATGTAGTAAACA 59.053 41.667 0.65 0.00 43.86 2.83
173 174 5.163652 GGGCAGAATTCCATGTAGTAAACAC 60.164 44.000 0.65 0.00 42.09 3.32
174 175 5.163652 GGCAGAATTCCATGTAGTAAACACC 60.164 44.000 0.65 0.00 42.09 4.16
175 176 5.447279 GCAGAATTCCATGTAGTAAACACCG 60.447 44.000 0.65 0.00 42.09 4.94
176 177 5.064707 CAGAATTCCATGTAGTAAACACCGG 59.935 44.000 0.00 0.00 42.09 5.28
177 178 2.389962 TCCATGTAGTAAACACCGGC 57.610 50.000 0.00 0.00 42.09 6.13
178 179 1.624312 TCCATGTAGTAAACACCGGCA 59.376 47.619 0.00 0.00 42.09 5.69
179 180 2.038689 TCCATGTAGTAAACACCGGCAA 59.961 45.455 0.00 0.00 42.09 4.52
180 181 2.814919 CCATGTAGTAAACACCGGCAAA 59.185 45.455 0.00 0.00 42.09 3.68
181 182 3.253677 CCATGTAGTAAACACCGGCAAAA 59.746 43.478 0.00 0.00 42.09 2.44
182 183 4.082463 CCATGTAGTAAACACCGGCAAAAT 60.082 41.667 0.00 0.00 42.09 1.82
183 184 5.124138 CCATGTAGTAAACACCGGCAAAATA 59.876 40.000 0.00 0.00 42.09 1.40
184 185 6.183360 CCATGTAGTAAACACCGGCAAAATAT 60.183 38.462 0.00 0.00 42.09 1.28
185 186 6.821031 TGTAGTAAACACCGGCAAAATATT 57.179 33.333 0.00 0.00 31.43 1.28
186 187 6.613233 TGTAGTAAACACCGGCAAAATATTG 58.387 36.000 0.00 0.00 34.69 1.90
187 188 5.968528 AGTAAACACCGGCAAAATATTGA 57.031 34.783 0.00 0.00 38.94 2.57
188 189 6.334102 AGTAAACACCGGCAAAATATTGAA 57.666 33.333 0.00 0.00 38.94 2.69
189 190 6.750148 AGTAAACACCGGCAAAATATTGAAA 58.250 32.000 0.00 0.00 38.94 2.69
190 191 5.915812 AAACACCGGCAAAATATTGAAAC 57.084 34.783 0.00 0.00 38.94 2.78
191 192 4.864704 ACACCGGCAAAATATTGAAACT 57.135 36.364 0.00 0.00 38.94 2.66
192 193 5.208463 ACACCGGCAAAATATTGAAACTT 57.792 34.783 0.00 0.00 38.94 2.66
193 194 5.606505 ACACCGGCAAAATATTGAAACTTT 58.393 33.333 0.00 0.00 38.94 2.66
194 195 6.750148 ACACCGGCAAAATATTGAAACTTTA 58.250 32.000 0.00 0.00 38.94 1.85
195 196 6.643360 ACACCGGCAAAATATTGAAACTTTAC 59.357 34.615 0.00 0.00 38.94 2.01
196 197 5.859648 ACCGGCAAAATATTGAAACTTTACG 59.140 36.000 0.00 0.00 38.94 3.18
197 198 5.859648 CCGGCAAAATATTGAAACTTTACGT 59.140 36.000 0.00 0.00 38.94 3.57
198 199 6.183359 CCGGCAAAATATTGAAACTTTACGTG 60.183 38.462 0.00 0.00 38.94 4.49
199 200 6.183359 CGGCAAAATATTGAAACTTTACGTGG 60.183 38.462 0.00 0.00 38.94 4.94
200 201 6.864165 GGCAAAATATTGAAACTTTACGTGGA 59.136 34.615 0.00 0.00 38.94 4.02
201 202 7.382759 GGCAAAATATTGAAACTTTACGTGGAA 59.617 33.333 0.00 0.00 38.94 3.53
202 203 8.921670 GCAAAATATTGAAACTTTACGTGGAAT 58.078 29.630 0.00 0.00 38.94 3.01
206 207 9.974980 AATATTGAAACTTTACGTGGAATTTGT 57.025 25.926 0.00 0.00 0.00 2.83
209 210 6.432107 TGAAACTTTACGTGGAATTTGTAGC 58.568 36.000 0.00 0.00 0.00 3.58
210 211 5.366829 AACTTTACGTGGAATTTGTAGCC 57.633 39.130 0.00 0.00 0.00 3.93
211 212 4.648651 ACTTTACGTGGAATTTGTAGCCT 58.351 39.130 0.00 0.00 0.00 4.58
212 213 4.694037 ACTTTACGTGGAATTTGTAGCCTC 59.306 41.667 0.00 0.00 0.00 4.70
213 214 2.109425 ACGTGGAATTTGTAGCCTCC 57.891 50.000 0.00 0.00 0.00 4.30
214 215 1.349688 ACGTGGAATTTGTAGCCTCCA 59.650 47.619 0.00 0.00 35.58 3.86
215 216 2.026262 ACGTGGAATTTGTAGCCTCCAT 60.026 45.455 0.00 0.00 40.03 3.41
216 217 3.199071 ACGTGGAATTTGTAGCCTCCATA 59.801 43.478 0.00 0.00 40.03 2.74
217 218 4.196193 CGTGGAATTTGTAGCCTCCATAA 58.804 43.478 0.00 0.00 40.03 1.90
218 219 4.821805 CGTGGAATTTGTAGCCTCCATAAT 59.178 41.667 0.00 0.00 40.03 1.28
219 220 5.277974 CGTGGAATTTGTAGCCTCCATAATG 60.278 44.000 0.00 0.00 40.03 1.90
220 221 5.594317 GTGGAATTTGTAGCCTCCATAATGT 59.406 40.000 0.00 0.00 40.03 2.71
221 222 6.770785 GTGGAATTTGTAGCCTCCATAATGTA 59.229 38.462 0.00 0.00 40.03 2.29
222 223 6.770785 TGGAATTTGTAGCCTCCATAATGTAC 59.229 38.462 0.00 0.00 32.97 2.90
223 224 6.770785 GGAATTTGTAGCCTCCATAATGTACA 59.229 38.462 0.00 0.00 0.00 2.90
224 225 7.255139 GGAATTTGTAGCCTCCATAATGTACAC 60.255 40.741 0.00 0.00 0.00 2.90
225 226 4.682778 TGTAGCCTCCATAATGTACACC 57.317 45.455 0.00 0.00 0.00 4.16
226 227 4.034410 TGTAGCCTCCATAATGTACACCA 58.966 43.478 0.00 0.00 0.00 4.17
227 228 3.560636 AGCCTCCATAATGTACACCAC 57.439 47.619 0.00 0.00 0.00 4.16
228 229 2.843730 AGCCTCCATAATGTACACCACA 59.156 45.455 0.00 0.00 42.69 4.17
229 230 2.943033 GCCTCCATAATGTACACCACAC 59.057 50.000 0.00 0.00 40.86 3.82
230 231 3.541632 CCTCCATAATGTACACCACACC 58.458 50.000 0.00 0.00 40.86 4.16
231 232 3.194861 CTCCATAATGTACACCACACCG 58.805 50.000 0.00 0.00 40.86 4.94
232 233 1.668751 CCATAATGTACACCACACCGC 59.331 52.381 0.00 0.00 40.86 5.68
233 234 1.668751 CATAATGTACACCACACCGCC 59.331 52.381 0.00 0.00 40.86 6.13
234 235 0.390078 TAATGTACACCACACCGCCG 60.390 55.000 0.00 0.00 40.86 6.46
235 236 3.599285 ATGTACACCACACCGCCGG 62.599 63.158 0.00 0.00 40.86 6.13
236 237 3.993584 GTACACCACACCGCCGGA 61.994 66.667 11.71 0.00 0.00 5.14
237 238 3.687102 TACACCACACCGCCGGAG 61.687 66.667 11.71 3.87 0.00 4.63
239 240 3.687102 CACCACACCGCCGGAGTA 61.687 66.667 11.71 0.00 0.00 2.59
240 241 3.379445 ACCACACCGCCGGAGTAG 61.379 66.667 11.71 3.22 0.00 2.57
241 242 4.814294 CCACACCGCCGGAGTAGC 62.814 72.222 11.71 0.00 0.00 3.58
242 243 4.063967 CACACCGCCGGAGTAGCA 62.064 66.667 11.71 0.00 0.00 3.49
243 244 3.760035 ACACCGCCGGAGTAGCAG 61.760 66.667 11.71 0.00 0.00 4.24
244 245 3.449227 CACCGCCGGAGTAGCAGA 61.449 66.667 11.71 0.00 0.00 4.26
245 246 2.678934 ACCGCCGGAGTAGCAGAA 60.679 61.111 11.71 0.00 0.00 3.02
246 247 2.202756 CCGCCGGAGTAGCAGAAC 60.203 66.667 5.05 0.00 0.00 3.01
247 248 2.202756 CGCCGGAGTAGCAGAACC 60.203 66.667 5.05 0.00 0.00 3.62
248 249 2.711922 CGCCGGAGTAGCAGAACCT 61.712 63.158 5.05 0.00 0.00 3.50
249 250 1.142097 GCCGGAGTAGCAGAACCTC 59.858 63.158 5.05 0.00 0.00 3.85
250 251 1.817209 CCGGAGTAGCAGAACCTCC 59.183 63.158 0.00 0.00 41.15 4.30
251 252 1.677637 CCGGAGTAGCAGAACCTCCC 61.678 65.000 0.00 0.00 41.45 4.30
252 253 1.817209 GGAGTAGCAGAACCTCCCG 59.183 63.158 0.00 0.00 39.10 5.14
253 254 1.677637 GGAGTAGCAGAACCTCCCGG 61.678 65.000 0.00 0.00 39.10 5.73
255 256 0.971447 AGTAGCAGAACCTCCCGGTC 60.971 60.000 0.00 0.00 44.73 4.79
256 257 2.050350 TAGCAGAACCTCCCGGTCG 61.050 63.158 0.00 0.00 44.73 4.79
257 258 2.488771 TAGCAGAACCTCCCGGTCGA 62.489 60.000 0.00 0.00 44.73 4.20
258 259 2.572284 CAGAACCTCCCGGTCGAC 59.428 66.667 7.13 7.13 44.73 4.20
259 260 1.977544 CAGAACCTCCCGGTCGACT 60.978 63.158 16.46 0.00 44.73 4.18
260 261 1.977544 AGAACCTCCCGGTCGACTG 60.978 63.158 17.81 17.81 44.73 3.51
261 262 1.975407 GAACCTCCCGGTCGACTGA 60.975 63.158 26.01 13.45 44.73 3.41
262 263 1.305046 AACCTCCCGGTCGACTGAT 60.305 57.895 26.01 2.80 44.73 2.90
263 264 1.605058 AACCTCCCGGTCGACTGATG 61.605 60.000 26.01 15.69 44.73 3.07
264 265 2.052690 CCTCCCGGTCGACTGATGT 61.053 63.158 26.01 0.00 0.00 3.06
265 266 1.433879 CTCCCGGTCGACTGATGTC 59.566 63.158 26.01 1.25 39.70 3.06
266 267 1.303806 TCCCGGTCGACTGATGTCA 60.304 57.895 26.01 1.48 43.06 3.58
267 268 0.683179 TCCCGGTCGACTGATGTCAT 60.683 55.000 26.01 0.00 43.06 3.06
268 269 0.175760 CCCGGTCGACTGATGTCATT 59.824 55.000 26.01 0.00 43.06 2.57
269 270 1.405526 CCCGGTCGACTGATGTCATTT 60.406 52.381 26.01 0.00 43.06 2.32
270 271 1.660607 CCGGTCGACTGATGTCATTTG 59.339 52.381 26.01 1.46 43.06 2.32
271 272 1.061131 CGGTCGACTGATGTCATTTGC 59.939 52.381 20.01 0.00 43.06 3.68
272 273 2.076100 GGTCGACTGATGTCATTTGCA 58.924 47.619 16.46 0.00 43.06 4.08
273 274 2.679837 GGTCGACTGATGTCATTTGCAT 59.320 45.455 16.46 0.00 43.06 3.96
274 275 3.486375 GGTCGACTGATGTCATTTGCATG 60.486 47.826 16.46 0.00 43.06 4.06
275 276 3.125829 GTCGACTGATGTCATTTGCATGT 59.874 43.478 8.70 0.00 43.06 3.21
276 277 3.125658 TCGACTGATGTCATTTGCATGTG 59.874 43.478 0.00 0.00 43.06 3.21
277 278 3.176708 GACTGATGTCATTTGCATGTGC 58.823 45.455 0.00 0.00 42.48 4.57
278 279 2.094390 ACTGATGTCATTTGCATGTGCC 60.094 45.455 2.07 0.00 41.18 5.01
279 280 1.205179 TGATGTCATTTGCATGTGCCC 59.795 47.619 2.07 0.00 41.18 5.36
280 281 1.205179 GATGTCATTTGCATGTGCCCA 59.795 47.619 2.07 0.00 41.18 5.36
281 282 1.268066 TGTCATTTGCATGTGCCCAT 58.732 45.000 2.07 0.00 41.18 4.00
294 295 5.718146 CATGTGCCCATGTTTTATGTAACA 58.282 37.500 0.37 0.00 42.92 2.41
295 296 5.127693 TGTGCCCATGTTTTATGTAACAC 57.872 39.130 0.00 0.00 40.53 3.32
296 297 4.021894 TGTGCCCATGTTTTATGTAACACC 60.022 41.667 0.00 0.00 40.53 4.16
297 298 3.511934 TGCCCATGTTTTATGTAACACCC 59.488 43.478 0.00 0.00 40.53 4.61
298 299 3.767131 GCCCATGTTTTATGTAACACCCT 59.233 43.478 0.00 0.00 40.53 4.34
299 300 4.951094 GCCCATGTTTTATGTAACACCCTA 59.049 41.667 0.00 0.00 40.53 3.53
300 301 5.067283 GCCCATGTTTTATGTAACACCCTAG 59.933 44.000 0.00 0.00 40.53 3.02
301 302 5.067283 CCCATGTTTTATGTAACACCCTAGC 59.933 44.000 0.00 0.00 40.53 3.42
302 303 5.650266 CCATGTTTTATGTAACACCCTAGCA 59.350 40.000 0.00 0.00 40.53 3.49
303 304 6.183360 CCATGTTTTATGTAACACCCTAGCAG 60.183 42.308 0.00 0.00 40.53 4.24
304 305 5.871834 TGTTTTATGTAACACCCTAGCAGT 58.128 37.500 0.00 0.00 33.31 4.40
305 306 7.006865 TGTTTTATGTAACACCCTAGCAGTA 57.993 36.000 0.00 0.00 33.31 2.74
306 307 7.101054 TGTTTTATGTAACACCCTAGCAGTAG 58.899 38.462 0.00 0.00 33.31 2.57
307 308 6.862469 TTTATGTAACACCCTAGCAGTAGT 57.138 37.500 0.00 0.00 0.00 2.73
308 309 4.737855 ATGTAACACCCTAGCAGTAGTG 57.262 45.455 0.00 0.00 36.30 2.74
317 318 4.468689 GCAGTAGTGCGGGGTCCC 62.469 72.222 6.82 0.00 40.71 4.46
327 328 2.111251 GGGGTCCCGAGCTATTGC 59.889 66.667 0.48 0.00 40.05 3.56
338 339 2.828933 GCTATTGCTAGGGCGCTAC 58.171 57.895 7.64 0.00 42.25 3.58
339 340 0.033504 GCTATTGCTAGGGCGCTACA 59.966 55.000 7.64 7.58 42.25 2.74
340 341 1.937108 GCTATTGCTAGGGCGCTACAG 60.937 57.143 7.64 0.93 42.25 2.74
341 342 0.033504 TATTGCTAGGGCGCTACAGC 59.966 55.000 16.46 16.46 42.25 4.40
342 343 1.690219 ATTGCTAGGGCGCTACAGCT 61.690 55.000 21.85 4.69 42.25 4.24
343 344 1.040893 TTGCTAGGGCGCTACAGCTA 61.041 55.000 21.85 14.28 42.25 3.32
344 345 1.040893 TGCTAGGGCGCTACAGCTAA 61.041 55.000 21.85 4.69 42.25 3.09
345 346 0.597898 GCTAGGGCGCTACAGCTAAC 60.598 60.000 16.13 0.00 39.32 2.34
346 347 0.032267 CTAGGGCGCTACAGCTAACC 59.968 60.000 7.64 0.00 39.32 2.85
347 348 0.396695 TAGGGCGCTACAGCTAACCT 60.397 55.000 7.64 4.10 38.75 3.50
348 349 1.221021 GGGCGCTACAGCTAACCTT 59.779 57.895 7.64 0.00 39.32 3.50
349 350 0.392595 GGGCGCTACAGCTAACCTTT 60.393 55.000 7.64 0.00 39.32 3.11
350 351 1.134610 GGGCGCTACAGCTAACCTTTA 60.135 52.381 7.64 0.00 39.32 1.85
351 352 2.202566 GGCGCTACAGCTAACCTTTAG 58.797 52.381 7.64 0.00 39.32 1.85
352 353 1.593469 GCGCTACAGCTAACCTTTAGC 59.407 52.381 9.49 9.49 43.32 3.09
353 354 2.888594 CGCTACAGCTAACCTTTAGCA 58.111 47.619 17.84 0.00 45.78 3.49
354 355 2.860735 CGCTACAGCTAACCTTTAGCAG 59.139 50.000 17.84 13.10 45.78 4.24
355 356 3.676324 CGCTACAGCTAACCTTTAGCAGT 60.676 47.826 17.84 17.36 45.78 4.40
356 357 4.439700 CGCTACAGCTAACCTTTAGCAGTA 60.440 45.833 17.84 17.52 45.78 2.74
358 359 3.863041 ACAGCTAACCTTTAGCAGTAGC 58.137 45.455 17.84 4.59 42.68 3.58
359 360 6.238416 CTACAGCTAACCTTTAGCAGTAGCG 61.238 48.000 25.11 12.79 46.14 4.26
368 369 4.371975 GCAGTAGCGGTGGTTTGA 57.628 55.556 0.00 0.00 0.00 2.69
369 370 1.866925 GCAGTAGCGGTGGTTTGAC 59.133 57.895 0.00 0.00 0.00 3.18
370 371 1.574702 GCAGTAGCGGTGGTTTGACC 61.575 60.000 0.00 0.00 39.22 4.02
371 372 0.034896 CAGTAGCGGTGGTTTGACCT 59.965 55.000 0.00 0.00 39.58 3.85
372 373 0.034896 AGTAGCGGTGGTTTGACCTG 59.965 55.000 0.00 0.00 39.58 4.00
373 374 1.302192 TAGCGGTGGTTTGACCTGC 60.302 57.895 0.00 0.00 39.58 4.85
374 375 4.025401 GCGGTGGTTTGACCTGCG 62.025 66.667 0.00 0.00 39.58 5.18
375 376 4.025401 CGGTGGTTTGACCTGCGC 62.025 66.667 0.00 0.00 39.58 6.09
376 377 2.594592 GGTGGTTTGACCTGCGCT 60.595 61.111 9.73 0.00 39.58 5.92
377 378 1.302192 GGTGGTTTGACCTGCGCTA 60.302 57.895 9.73 0.00 39.58 4.26
378 379 1.574702 GGTGGTTTGACCTGCGCTAC 61.575 60.000 9.73 0.00 39.58 3.58
379 380 0.602905 GTGGTTTGACCTGCGCTACT 60.603 55.000 9.73 0.00 39.58 2.57
380 381 0.602638 TGGTTTGACCTGCGCTACTG 60.603 55.000 9.73 0.00 39.58 2.74
381 382 1.497722 GTTTGACCTGCGCTACTGC 59.502 57.895 9.73 0.00 0.00 4.40
382 383 0.951040 GTTTGACCTGCGCTACTGCT 60.951 55.000 9.73 0.00 36.97 4.24
383 384 0.606096 TTTGACCTGCGCTACTGCTA 59.394 50.000 9.73 0.00 36.97 3.49
384 385 0.606096 TTGACCTGCGCTACTGCTAA 59.394 50.000 9.73 0.00 36.97 3.09
385 386 0.108804 TGACCTGCGCTACTGCTAAC 60.109 55.000 9.73 0.00 36.97 2.34
386 387 0.173708 GACCTGCGCTACTGCTAACT 59.826 55.000 9.73 0.00 36.97 2.24
387 388 0.173708 ACCTGCGCTACTGCTAACTC 59.826 55.000 9.73 0.00 36.97 3.01
388 389 0.173481 CCTGCGCTACTGCTAACTCA 59.827 55.000 9.73 0.00 36.97 3.41
389 390 1.554392 CTGCGCTACTGCTAACTCAG 58.446 55.000 9.73 0.00 39.86 3.35
391 392 1.272490 TGCGCTACTGCTAACTCAGTT 59.728 47.619 9.73 0.00 44.26 3.16
392 393 2.490509 TGCGCTACTGCTAACTCAGTTA 59.509 45.455 9.73 0.00 44.26 2.24
393 394 3.130516 TGCGCTACTGCTAACTCAGTTAT 59.869 43.478 9.73 0.00 44.26 1.89
394 395 3.731717 GCGCTACTGCTAACTCAGTTATC 59.268 47.826 0.00 0.00 44.26 1.75
395 396 4.733815 GCGCTACTGCTAACTCAGTTATCA 60.734 45.833 0.00 0.00 44.26 2.15
396 397 4.973051 CGCTACTGCTAACTCAGTTATCAG 59.027 45.833 21.74 21.74 44.26 2.90
807 4763 7.368480 TCTAGGGTTAATTTACAAAGAACGC 57.632 36.000 0.00 9.49 34.06 4.84
825 4781 2.039879 ACGCCCAGAACCAGAATTTACT 59.960 45.455 0.00 0.00 0.00 2.24
1064 5038 1.198713 CTCACTGTCCCACTAGCCAT 58.801 55.000 0.00 0.00 0.00 4.40
1163 5143 0.901580 CACCCTGCCCAGCTTCAATT 60.902 55.000 0.00 0.00 0.00 2.32
1230 5216 0.038251 TCGAGTGCAGCAAGTACCAG 60.038 55.000 0.00 0.00 32.67 4.00
1495 5484 4.708177 GTGCTTAATGCTCCAGGAGAATA 58.292 43.478 21.89 5.80 43.37 1.75
1594 5583 0.774096 TGGTCCCATCCCCAGTGAAA 60.774 55.000 0.00 0.00 0.00 2.69
1599 5588 1.145738 CCCATCCCCAGTGAAATAGGG 59.854 57.143 0.00 0.00 42.44 3.53
1625 5614 4.938226 CCTAAAGAAGCTTGTCTGGTTAGG 59.062 45.833 14.17 14.17 32.09 2.69
1627 5616 3.686916 AGAAGCTTGTCTGGTTAGGTC 57.313 47.619 2.10 0.00 0.00 3.85
1664 5653 4.505742 CCTCATAGGCCCTATTCCAAGAAC 60.506 50.000 0.00 0.00 0.00 3.01
1704 5693 3.248024 ACTCACCATCTTGTACCTTGGA 58.752 45.455 7.29 0.00 33.36 3.53
1750 5739 2.168728 CCTCCAGAACTAGGTTACCTGC 59.831 54.545 15.13 0.85 34.61 4.85
1765 5754 6.154021 AGGTTACCTGCTAAATTTACGAGAGA 59.846 38.462 1.74 0.00 29.57 3.10
1823 5812 6.570654 CCCTAATACCTTTGGGAGTCTAAA 57.429 41.667 0.00 0.00 46.83 1.85
1851 5840 4.019858 TCACTCACTTGTATCTCTGGGAG 58.980 47.826 0.00 0.00 0.00 4.30
1868 6001 2.484770 GGGAGAACAAACTTTTTGGGCC 60.485 50.000 0.00 0.00 0.00 5.80
2001 6134 3.688414 GCTTGCACCTAAGGGATAACCAT 60.688 47.826 0.00 0.00 43.89 3.55
2021 6298 6.368805 ACCATCTTTCTGGATTTATTCCTCC 58.631 40.000 0.00 0.00 45.68 4.30
2184 6677 3.655486 TCGAGAAATCGGCAACTTAACA 58.345 40.909 0.00 0.00 0.00 2.41
2203 6696 4.999751 ACAAATCTTGAGAAACTCGAGC 57.000 40.909 13.61 0.00 40.72 5.03
2258 6751 1.001068 CAATTTGTGCATCAGTGGCCA 59.999 47.619 0.00 0.00 0.00 5.36
2262 6755 1.078214 GTGCATCAGTGGCCAGCTA 60.078 57.895 5.11 0.00 0.00 3.32
2299 6792 7.520798 TGCAGAAGATAATTACCTGAATGGAT 58.479 34.615 0.00 0.00 39.71 3.41
2327 6820 5.154222 GCCATCAAGCTTGTTAAACTGTAC 58.846 41.667 25.19 2.93 0.00 2.90
2381 6874 8.900983 AATCAACTAGAAGGAGATATTTCTGC 57.099 34.615 0.00 0.00 40.42 4.26
2481 6974 4.815846 GGGGAGTGTCGTAAACTTAACAAA 59.184 41.667 0.00 0.00 0.00 2.83
2542 7035 1.203052 CAAGTATGGGGCAGCTGTTTG 59.797 52.381 16.64 4.20 0.00 2.93
2543 7036 0.323725 AGTATGGGGCAGCTGTTTGG 60.324 55.000 16.64 0.00 0.00 3.28
2583 7076 4.589216 TTCATCAAACAAGCTTGAAGGG 57.411 40.909 32.50 17.47 38.75 3.95
2595 7088 1.352352 CTTGAAGGGGAGCTTCCAAGA 59.648 52.381 14.70 0.00 38.64 3.02
2823 7316 3.903208 CCCTTCCATGTTAGGGGTG 57.097 57.895 17.74 0.00 46.21 4.61
2836 7329 2.445682 AGGGGTGTTGCACAACTTAA 57.554 45.000 14.16 0.00 41.67 1.85
2837 7330 2.957474 AGGGGTGTTGCACAACTTAAT 58.043 42.857 14.16 0.00 41.67 1.40
2838 7331 2.627699 AGGGGTGTTGCACAACTTAATG 59.372 45.455 14.16 0.00 41.67 1.90
2859 7352 7.595819 AATGGACAAGTTGGATTTAAGTGAA 57.404 32.000 7.96 0.00 0.00 3.18
2901 7394 7.553334 CAATACCAAGCCAACTTAGTAGTCTA 58.447 38.462 0.00 0.00 34.21 2.59
2958 7451 2.158900 ACTTAGTGGCTTGATCCCATCG 60.159 50.000 0.00 0.00 34.34 3.84
2980 7473 5.354234 TCGTCATTTAAGAGAATGGAAAGCC 59.646 40.000 0.00 0.00 37.56 4.35
3121 7614 2.158798 GGATTGCCCCCTTGTAGTAGTC 60.159 54.545 0.00 0.00 0.00 2.59
3126 7619 1.558294 CCCCCTTGTAGTAGTCCAACC 59.442 57.143 0.00 0.00 0.00 3.77
3357 7850 4.982295 GCAACCAACAATTTTAGTGAGACC 59.018 41.667 0.00 0.00 0.00 3.85
3366 7859 6.014327 ACAATTTTAGTGAGACCCATTGCATT 60.014 34.615 0.00 0.00 0.00 3.56
3372 7865 2.170166 GAGACCCATTGCATTGGAACA 58.830 47.619 25.72 0.00 39.25 3.18
3409 7902 6.682746 TCTGTCTACAAAGCTAGAGTTTCAG 58.317 40.000 0.00 0.00 0.00 3.02
3767 8260 7.230849 ACAACATTTTGCTTGATCTGGAATA 57.769 32.000 0.00 0.00 36.00 1.75
3952 8497 9.234384 GATGATCTTTGATCAATTTACTTGCAG 57.766 33.333 9.40 0.24 34.66 4.41
4203 8748 6.357579 AGAGAAATATACTCCATGCTCAGG 57.642 41.667 0.00 0.00 35.27 3.86
4385 8930 6.150307 ACGTGATTGTGCCATGTAATTTCTTA 59.850 34.615 0.00 0.00 32.50 2.10
4543 9089 2.521126 CCCGAACCTGGGTAAAACATT 58.479 47.619 0.00 0.00 44.76 2.71
4629 9175 1.225376 TGCCAGTTTTAGCACCGACG 61.225 55.000 0.00 0.00 33.08 5.12
4646 9201 5.353400 CACCGACGCTACTCTAATCCATATA 59.647 44.000 0.00 0.00 0.00 0.86
4759 9314 1.064060 CAATCCGATCGAAAAGTGCCC 59.936 52.381 18.66 0.00 0.00 5.36
4788 9343 4.090066 CCGAGTTCATCACTTAACGACTTG 59.910 45.833 0.00 0.00 35.01 3.16
4792 9347 7.253354 CGAGTTCATCACTTAACGACTTGATAC 60.253 40.741 0.00 0.00 35.01 2.24
4931 9559 2.125512 CAAAGCGGAGGAGGACGG 60.126 66.667 0.00 0.00 0.00 4.79
5040 9668 2.932234 CGCCAACCACTCCGACTCT 61.932 63.158 0.00 0.00 0.00 3.24
5111 9741 0.803117 CGTCTCTGCGGAAGTGTAGA 59.197 55.000 0.00 0.00 0.00 2.59
5177 9997 9.587772 AATATACGATGGAAGCAATATCTGTAC 57.412 33.333 0.00 0.00 0.00 2.90
5188 10008 6.762333 AGCAATATCTGTACATGCATGACTA 58.238 36.000 32.75 13.15 39.42 2.59
5274 10094 6.903883 ACAACATGATCGTATCCACTAAAC 57.096 37.500 0.00 0.00 0.00 2.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.459985 CGCCTTGGATTGACATATTTCATCAA 60.460 38.462 0.00 0.00 36.81 2.57
1 2 5.008911 CGCCTTGGATTGACATATTTCATCA 59.991 40.000 0.00 0.00 0.00 3.07
2 3 5.455392 CGCCTTGGATTGACATATTTCATC 58.545 41.667 0.00 0.00 0.00 2.92
3 4 4.279169 CCGCCTTGGATTGACATATTTCAT 59.721 41.667 0.00 0.00 42.00 2.57
4 5 3.631686 CCGCCTTGGATTGACATATTTCA 59.368 43.478 0.00 0.00 42.00 2.69
5 6 3.550842 GCCGCCTTGGATTGACATATTTC 60.551 47.826 0.00 0.00 42.00 2.17
6 7 2.362077 GCCGCCTTGGATTGACATATTT 59.638 45.455 0.00 0.00 42.00 1.40
7 8 1.956477 GCCGCCTTGGATTGACATATT 59.044 47.619 0.00 0.00 42.00 1.28
8 9 1.143684 AGCCGCCTTGGATTGACATAT 59.856 47.619 0.00 0.00 42.00 1.78
9 10 0.546122 AGCCGCCTTGGATTGACATA 59.454 50.000 0.00 0.00 42.00 2.29
10 11 0.749454 GAGCCGCCTTGGATTGACAT 60.749 55.000 0.00 0.00 42.00 3.06
11 12 1.377202 GAGCCGCCTTGGATTGACA 60.377 57.895 0.00 0.00 42.00 3.58
12 13 2.115291 GGAGCCGCCTTGGATTGAC 61.115 63.158 0.00 0.00 42.00 3.18
13 14 2.272146 GGAGCCGCCTTGGATTGA 59.728 61.111 0.00 0.00 42.00 2.57
14 15 2.045045 TGGAGCCGCCTTGGATTG 60.045 61.111 0.00 0.00 42.00 2.67
15 16 2.044946 GTGGAGCCGCCTTGGATT 60.045 61.111 0.00 0.00 42.00 3.01
16 17 1.344953 TATGTGGAGCCGCCTTGGAT 61.345 55.000 0.00 0.00 42.00 3.41
17 18 1.344953 ATATGTGGAGCCGCCTTGGA 61.345 55.000 0.00 0.00 42.00 3.53
18 19 0.886490 GATATGTGGAGCCGCCTTGG 60.886 60.000 0.00 0.00 42.50 3.61
19 20 0.107456 AGATATGTGGAGCCGCCTTG 59.893 55.000 0.00 0.00 37.63 3.61
20 21 0.394565 GAGATATGTGGAGCCGCCTT 59.605 55.000 0.00 0.00 37.63 4.35
21 22 0.470833 AGAGATATGTGGAGCCGCCT 60.471 55.000 0.00 0.00 37.63 5.52
22 23 0.037790 GAGAGATATGTGGAGCCGCC 60.038 60.000 0.00 0.00 37.10 6.13
23 24 0.387878 CGAGAGATATGTGGAGCCGC 60.388 60.000 0.00 0.00 0.00 6.53
24 25 1.198867 CTCGAGAGATATGTGGAGCCG 59.801 57.143 6.58 0.00 40.84 5.52
25 26 2.030363 CACTCGAGAGATATGTGGAGCC 60.030 54.545 21.68 0.00 40.84 4.70
26 27 2.881513 TCACTCGAGAGATATGTGGAGC 59.118 50.000 21.68 0.00 40.84 4.70
27 28 5.703978 ATTCACTCGAGAGATATGTGGAG 57.296 43.478 21.68 0.00 40.84 3.86
28 29 6.017026 GTGTATTCACTCGAGAGATATGTGGA 60.017 42.308 21.68 0.00 40.98 4.02
29 30 6.146216 GTGTATTCACTCGAGAGATATGTGG 58.854 44.000 21.68 0.00 40.98 4.17
30 31 5.848559 CGTGTATTCACTCGAGAGATATGTG 59.151 44.000 21.68 5.86 42.71 3.21
31 32 5.527951 ACGTGTATTCACTCGAGAGATATGT 59.472 40.000 21.68 11.61 42.71 2.29
32 33 5.848559 CACGTGTATTCACTCGAGAGATATG 59.151 44.000 21.68 6.53 42.71 1.78
33 34 5.758784 TCACGTGTATTCACTCGAGAGATAT 59.241 40.000 21.68 14.41 42.71 1.63
34 35 5.114081 TCACGTGTATTCACTCGAGAGATA 58.886 41.667 21.68 10.78 42.71 1.98
35 36 3.939592 TCACGTGTATTCACTCGAGAGAT 59.060 43.478 21.68 11.77 42.71 2.75
36 37 3.332034 TCACGTGTATTCACTCGAGAGA 58.668 45.455 21.68 14.84 42.71 3.10
37 38 3.741805 TCACGTGTATTCACTCGAGAG 57.258 47.619 21.68 12.21 42.71 3.20
38 39 3.749609 TCTTCACGTGTATTCACTCGAGA 59.250 43.478 21.68 0.00 42.71 4.04
39 40 4.079665 TCTTCACGTGTATTCACTCGAG 57.920 45.455 16.51 11.84 42.71 4.04
40 41 4.492791 TTCTTCACGTGTATTCACTCGA 57.507 40.909 16.51 0.00 42.71 4.04
41 42 6.255950 TCTATTCTTCACGTGTATTCACTCG 58.744 40.000 16.51 0.00 44.92 4.18
42 43 7.168302 CCATCTATTCTTCACGTGTATTCACTC 59.832 40.741 16.51 0.00 41.89 3.51
43 44 6.980978 CCATCTATTCTTCACGTGTATTCACT 59.019 38.462 16.51 0.00 41.89 3.41
44 45 6.757010 ACCATCTATTCTTCACGTGTATTCAC 59.243 38.462 16.51 0.00 40.79 3.18
45 46 6.756542 CACCATCTATTCTTCACGTGTATTCA 59.243 38.462 16.51 0.00 0.00 2.57
46 47 6.757010 ACACCATCTATTCTTCACGTGTATTC 59.243 38.462 16.51 0.00 31.78 1.75
47 48 6.640518 ACACCATCTATTCTTCACGTGTATT 58.359 36.000 16.51 2.21 31.78 1.89
48 49 6.222038 ACACCATCTATTCTTCACGTGTAT 57.778 37.500 16.51 7.79 31.78 2.29
49 50 5.654603 ACACCATCTATTCTTCACGTGTA 57.345 39.130 16.51 4.82 31.78 2.90
50 51 4.537135 ACACCATCTATTCTTCACGTGT 57.463 40.909 16.51 0.00 0.00 4.49
51 52 8.300286 AGATATACACCATCTATTCTTCACGTG 58.700 37.037 9.94 9.94 30.89 4.49
52 53 8.410673 AGATATACACCATCTATTCTTCACGT 57.589 34.615 0.00 0.00 30.89 4.49
53 54 9.347934 GAAGATATACACCATCTATTCTTCACG 57.652 37.037 0.00 0.00 32.40 4.35
58 59 8.748412 GCTCTGAAGATATACACCATCTATTCT 58.252 37.037 0.00 0.00 32.40 2.40
59 60 8.748412 AGCTCTGAAGATATACACCATCTATTC 58.252 37.037 0.00 0.00 32.40 1.75
60 61 8.663209 AGCTCTGAAGATATACACCATCTATT 57.337 34.615 0.00 0.00 32.40 1.73
61 62 8.115384 AGAGCTCTGAAGATATACACCATCTAT 58.885 37.037 17.42 0.00 32.40 1.98
62 63 7.392953 CAGAGCTCTGAAGATATACACCATCTA 59.607 40.741 35.69 0.00 46.59 1.98
63 64 6.209192 CAGAGCTCTGAAGATATACACCATCT 59.791 42.308 35.69 0.00 46.59 2.90
64 65 6.389091 CAGAGCTCTGAAGATATACACCATC 58.611 44.000 35.69 0.00 46.59 3.51
65 66 6.343716 CAGAGCTCTGAAGATATACACCAT 57.656 41.667 35.69 0.00 46.59 3.55
66 67 5.781210 CAGAGCTCTGAAGATATACACCA 57.219 43.478 35.69 0.00 46.59 4.17
79 80 2.099263 CCAATTTGCCATCAGAGCTCTG 59.901 50.000 33.73 33.73 45.08 3.35
80 81 2.376109 CCAATTTGCCATCAGAGCTCT 58.624 47.619 11.45 11.45 0.00 4.09
81 82 1.407979 CCCAATTTGCCATCAGAGCTC 59.592 52.381 5.27 5.27 0.00 4.09
82 83 1.481871 CCCAATTTGCCATCAGAGCT 58.518 50.000 0.00 0.00 0.00 4.09
83 84 0.179092 GCCCAATTTGCCATCAGAGC 60.179 55.000 0.00 0.00 0.00 4.09
84 85 1.134907 GTGCCCAATTTGCCATCAGAG 60.135 52.381 0.00 0.00 0.00 3.35
85 86 0.896923 GTGCCCAATTTGCCATCAGA 59.103 50.000 0.00 0.00 0.00 3.27
86 87 0.108041 GGTGCCCAATTTGCCATCAG 60.108 55.000 0.00 0.00 0.00 2.90
87 88 1.551908 GGGTGCCCAATTTGCCATCA 61.552 55.000 1.66 0.00 35.81 3.07
88 89 1.221566 GGGTGCCCAATTTGCCATC 59.778 57.895 1.66 0.00 35.81 3.51
89 90 1.229593 AGGGTGCCCAATTTGCCAT 60.230 52.632 10.26 0.00 38.92 4.40
90 91 1.912763 GAGGGTGCCCAATTTGCCA 60.913 57.895 10.26 0.00 38.92 4.92
91 92 0.324275 TAGAGGGTGCCCAATTTGCC 60.324 55.000 10.26 0.00 38.92 4.52
92 93 1.555967 TTAGAGGGTGCCCAATTTGC 58.444 50.000 10.26 0.00 38.92 3.68
93 94 3.679639 GCAATTAGAGGGTGCCCAATTTG 60.680 47.826 10.26 8.27 38.92 2.32
94 95 2.501316 GCAATTAGAGGGTGCCCAATTT 59.499 45.455 10.26 0.00 38.92 1.82
95 96 2.110578 GCAATTAGAGGGTGCCCAATT 58.889 47.619 10.26 4.35 38.92 2.32
96 97 1.780503 GCAATTAGAGGGTGCCCAAT 58.219 50.000 10.26 0.00 38.92 3.16
97 98 3.281332 GCAATTAGAGGGTGCCCAA 57.719 52.632 10.26 0.00 38.92 4.12
101 102 1.823899 CGGGGCAATTAGAGGGTGC 60.824 63.158 0.00 0.00 37.55 5.01
102 103 0.463833 GTCGGGGCAATTAGAGGGTG 60.464 60.000 0.00 0.00 0.00 4.61
103 104 1.912971 GTCGGGGCAATTAGAGGGT 59.087 57.895 0.00 0.00 0.00 4.34
104 105 1.227556 CGTCGGGGCAATTAGAGGG 60.228 63.158 0.00 0.00 0.00 4.30
105 106 0.810031 CACGTCGGGGCAATTAGAGG 60.810 60.000 0.00 0.00 0.00 3.69
106 107 0.108329 ACACGTCGGGGCAATTAGAG 60.108 55.000 0.00 0.00 0.00 2.43
107 108 0.108520 GACACGTCGGGGCAATTAGA 60.109 55.000 0.00 0.00 0.00 2.10
108 109 0.108329 AGACACGTCGGGGCAATTAG 60.108 55.000 1.59 0.00 34.09 1.73
109 110 1.184431 TAGACACGTCGGGGCAATTA 58.816 50.000 1.59 0.00 34.09 1.40
110 111 0.539986 ATAGACACGTCGGGGCAATT 59.460 50.000 1.59 0.00 34.09 2.32
111 112 0.539986 AATAGACACGTCGGGGCAAT 59.460 50.000 1.59 0.00 34.09 3.56
112 113 1.135527 CTAATAGACACGTCGGGGCAA 59.864 52.381 1.59 0.00 34.09 4.52
113 114 0.742505 CTAATAGACACGTCGGGGCA 59.257 55.000 1.59 0.00 34.09 5.36
114 115 0.596859 GCTAATAGACACGTCGGGGC 60.597 60.000 0.00 0.00 34.09 5.80
115 116 0.317603 CGCTAATAGACACGTCGGGG 60.318 60.000 0.00 0.00 34.09 5.73
116 117 0.659427 TCGCTAATAGACACGTCGGG 59.341 55.000 0.00 0.00 34.09 5.14
117 118 1.920705 GCTCGCTAATAGACACGTCGG 60.921 57.143 0.00 0.00 34.09 4.79
118 119 1.267882 TGCTCGCTAATAGACACGTCG 60.268 52.381 0.00 0.00 34.09 5.12
119 120 2.470196 TGCTCGCTAATAGACACGTC 57.530 50.000 0.00 0.00 0.00 4.34
120 121 3.304525 GGTATGCTCGCTAATAGACACGT 60.305 47.826 0.00 0.00 0.00 4.49
121 122 3.058155 AGGTATGCTCGCTAATAGACACG 60.058 47.826 0.00 0.00 0.00 4.49
122 123 4.506886 AGGTATGCTCGCTAATAGACAC 57.493 45.455 0.00 0.00 0.00 3.67
123 124 5.531122 AAAGGTATGCTCGCTAATAGACA 57.469 39.130 0.00 0.00 0.00 3.41
124 125 6.586844 CCTAAAAGGTATGCTCGCTAATAGAC 59.413 42.308 0.00 0.00 0.00 2.59
125 126 6.295123 CCCTAAAAGGTATGCTCGCTAATAGA 60.295 42.308 0.00 0.00 31.93 1.98
126 127 5.869888 CCCTAAAAGGTATGCTCGCTAATAG 59.130 44.000 0.00 0.00 31.93 1.73
127 128 5.279809 CCCCTAAAAGGTATGCTCGCTAATA 60.280 44.000 0.00 0.00 31.93 0.98
128 129 4.505039 CCCCTAAAAGGTATGCTCGCTAAT 60.505 45.833 0.00 0.00 31.93 1.73
129 130 3.181458 CCCCTAAAAGGTATGCTCGCTAA 60.181 47.826 0.00 0.00 31.93 3.09
130 131 2.367567 CCCCTAAAAGGTATGCTCGCTA 59.632 50.000 0.00 0.00 31.93 4.26
131 132 1.141053 CCCCTAAAAGGTATGCTCGCT 59.859 52.381 0.00 0.00 31.93 4.93
132 133 1.594331 CCCCTAAAAGGTATGCTCGC 58.406 55.000 0.00 0.00 31.93 5.03
133 134 1.134220 TGCCCCTAAAAGGTATGCTCG 60.134 52.381 0.00 0.00 31.93 5.03
134 135 2.172717 TCTGCCCCTAAAAGGTATGCTC 59.827 50.000 0.00 0.00 31.93 4.26
135 136 2.205342 TCTGCCCCTAAAAGGTATGCT 58.795 47.619 0.00 0.00 31.93 3.79
136 137 2.729028 TCTGCCCCTAAAAGGTATGC 57.271 50.000 0.00 0.00 31.93 3.14
137 138 4.584743 GGAATTCTGCCCCTAAAAGGTATG 59.415 45.833 5.23 0.00 31.93 2.39
138 139 4.231890 TGGAATTCTGCCCCTAAAAGGTAT 59.768 41.667 5.23 0.00 31.93 2.73
139 140 3.594232 TGGAATTCTGCCCCTAAAAGGTA 59.406 43.478 5.23 0.00 31.93 3.08
140 141 2.381961 TGGAATTCTGCCCCTAAAAGGT 59.618 45.455 5.23 0.00 31.93 3.50
141 142 3.100207 TGGAATTCTGCCCCTAAAAGG 57.900 47.619 5.23 0.00 34.30 3.11
142 143 4.026052 ACATGGAATTCTGCCCCTAAAAG 58.974 43.478 5.23 0.00 0.00 2.27
143 144 4.059773 ACATGGAATTCTGCCCCTAAAA 57.940 40.909 5.23 0.00 0.00 1.52
144 145 3.756082 ACATGGAATTCTGCCCCTAAA 57.244 42.857 5.23 0.00 0.00 1.85
145 146 3.785887 ACTACATGGAATTCTGCCCCTAA 59.214 43.478 5.23 0.00 0.00 2.69
146 147 3.393687 ACTACATGGAATTCTGCCCCTA 58.606 45.455 5.23 0.00 0.00 3.53
147 148 2.208872 ACTACATGGAATTCTGCCCCT 58.791 47.619 5.23 0.00 0.00 4.79
148 149 2.736670 ACTACATGGAATTCTGCCCC 57.263 50.000 5.23 0.00 0.00 5.80
149 150 4.947388 TGTTTACTACATGGAATTCTGCCC 59.053 41.667 5.23 0.00 0.00 5.36
150 151 5.163652 GGTGTTTACTACATGGAATTCTGCC 60.164 44.000 5.23 0.00 39.39 4.85
151 152 5.447279 CGGTGTTTACTACATGGAATTCTGC 60.447 44.000 5.23 0.00 39.39 4.26
152 153 5.064707 CCGGTGTTTACTACATGGAATTCTG 59.935 44.000 5.23 0.00 39.39 3.02
153 154 5.183228 CCGGTGTTTACTACATGGAATTCT 58.817 41.667 5.23 0.00 39.39 2.40
154 155 4.201881 GCCGGTGTTTACTACATGGAATTC 60.202 45.833 1.90 0.00 39.39 2.17
155 156 3.692593 GCCGGTGTTTACTACATGGAATT 59.307 43.478 1.90 0.00 39.39 2.17
156 157 3.275999 GCCGGTGTTTACTACATGGAAT 58.724 45.455 1.90 0.00 39.39 3.01
157 158 2.038689 TGCCGGTGTTTACTACATGGAA 59.961 45.455 1.90 0.00 39.39 3.53
158 159 1.624312 TGCCGGTGTTTACTACATGGA 59.376 47.619 1.90 0.00 39.39 3.41
159 160 2.102070 TGCCGGTGTTTACTACATGG 57.898 50.000 1.90 0.00 39.39 3.66
160 161 4.491234 TTTTGCCGGTGTTTACTACATG 57.509 40.909 1.90 0.00 39.39 3.21
161 162 7.121463 TCAATATTTTGCCGGTGTTTACTACAT 59.879 33.333 1.90 0.00 34.39 2.29
162 163 6.430308 TCAATATTTTGCCGGTGTTTACTACA 59.570 34.615 1.90 0.00 32.61 2.74
163 164 6.844254 TCAATATTTTGCCGGTGTTTACTAC 58.156 36.000 1.90 0.00 32.61 2.73
164 165 7.450124 TTCAATATTTTGCCGGTGTTTACTA 57.550 32.000 1.90 0.00 32.61 1.82
165 166 5.968528 TCAATATTTTGCCGGTGTTTACT 57.031 34.783 1.90 0.00 32.61 2.24
166 167 6.643360 AGTTTCAATATTTTGCCGGTGTTTAC 59.357 34.615 1.90 0.00 32.61 2.01
167 168 6.750148 AGTTTCAATATTTTGCCGGTGTTTA 58.250 32.000 1.90 0.00 32.61 2.01
168 169 5.606505 AGTTTCAATATTTTGCCGGTGTTT 58.393 33.333 1.90 0.00 32.61 2.83
169 170 5.208463 AGTTTCAATATTTTGCCGGTGTT 57.792 34.783 1.90 0.00 32.61 3.32
170 171 4.864704 AGTTTCAATATTTTGCCGGTGT 57.135 36.364 1.90 0.00 32.61 4.16
171 172 6.183359 CGTAAAGTTTCAATATTTTGCCGGTG 60.183 38.462 1.90 0.00 32.61 4.94
172 173 5.859648 CGTAAAGTTTCAATATTTTGCCGGT 59.140 36.000 1.90 0.00 32.61 5.28
173 174 5.859648 ACGTAAAGTTTCAATATTTTGCCGG 59.140 36.000 0.00 0.00 32.61 6.13
174 175 6.183359 CCACGTAAAGTTTCAATATTTTGCCG 60.183 38.462 0.00 0.00 32.61 5.69
175 176 6.864165 TCCACGTAAAGTTTCAATATTTTGCC 59.136 34.615 0.00 0.00 32.61 4.52
176 177 7.861176 TCCACGTAAAGTTTCAATATTTTGC 57.139 32.000 0.00 0.00 32.61 3.68
180 181 9.974980 ACAAATTCCACGTAAAGTTTCAATATT 57.025 25.926 0.00 0.00 0.00 1.28
183 184 7.593644 GCTACAAATTCCACGTAAAGTTTCAAT 59.406 33.333 0.00 0.00 0.00 2.57
184 185 6.913673 GCTACAAATTCCACGTAAAGTTTCAA 59.086 34.615 0.00 0.00 0.00 2.69
185 186 6.432107 GCTACAAATTCCACGTAAAGTTTCA 58.568 36.000 0.00 0.00 0.00 2.69
186 187 5.854866 GGCTACAAATTCCACGTAAAGTTTC 59.145 40.000 0.00 0.00 0.00 2.78
187 188 5.533528 AGGCTACAAATTCCACGTAAAGTTT 59.466 36.000 0.00 0.00 0.00 2.66
188 189 5.067954 AGGCTACAAATTCCACGTAAAGTT 58.932 37.500 0.00 0.00 0.00 2.66
189 190 4.648651 AGGCTACAAATTCCACGTAAAGT 58.351 39.130 0.00 0.00 0.00 2.66
190 191 4.094442 GGAGGCTACAAATTCCACGTAAAG 59.906 45.833 0.00 0.00 0.00 1.85
191 192 4.004982 GGAGGCTACAAATTCCACGTAAA 58.995 43.478 0.00 0.00 0.00 2.01
192 193 3.008157 TGGAGGCTACAAATTCCACGTAA 59.992 43.478 0.00 0.00 34.90 3.18
193 194 2.568062 TGGAGGCTACAAATTCCACGTA 59.432 45.455 0.00 0.00 34.90 3.57
194 195 1.349688 TGGAGGCTACAAATTCCACGT 59.650 47.619 0.00 0.00 34.90 4.49
195 196 2.107950 TGGAGGCTACAAATTCCACG 57.892 50.000 0.00 0.00 34.90 4.94
196 197 5.594317 ACATTATGGAGGCTACAAATTCCAC 59.406 40.000 2.08 0.00 42.12 4.02
197 198 5.765510 ACATTATGGAGGCTACAAATTCCA 58.234 37.500 2.08 0.00 43.36 3.53
198 199 6.770785 TGTACATTATGGAGGCTACAAATTCC 59.229 38.462 2.08 0.00 0.00 3.01
199 200 7.255139 GGTGTACATTATGGAGGCTACAAATTC 60.255 40.741 2.08 0.32 0.00 2.17
200 201 6.546034 GGTGTACATTATGGAGGCTACAAATT 59.454 38.462 2.08 0.00 0.00 1.82
201 202 6.062095 GGTGTACATTATGGAGGCTACAAAT 58.938 40.000 2.08 2.35 0.00 2.32
202 203 5.045505 TGGTGTACATTATGGAGGCTACAAA 60.046 40.000 2.08 0.00 0.00 2.83
203 204 4.471747 TGGTGTACATTATGGAGGCTACAA 59.528 41.667 2.08 0.00 0.00 2.41
204 205 4.034410 TGGTGTACATTATGGAGGCTACA 58.966 43.478 0.00 0.00 0.00 2.74
205 206 4.141801 TGTGGTGTACATTATGGAGGCTAC 60.142 45.833 0.00 0.00 33.42 3.58
206 207 4.034410 TGTGGTGTACATTATGGAGGCTA 58.966 43.478 0.00 0.00 33.42 3.93
207 208 2.843730 TGTGGTGTACATTATGGAGGCT 59.156 45.455 0.00 0.00 33.42 4.58
208 209 2.943033 GTGTGGTGTACATTATGGAGGC 59.057 50.000 0.00 0.00 42.24 4.70
209 210 3.541632 GGTGTGGTGTACATTATGGAGG 58.458 50.000 0.00 0.00 42.24 4.30
210 211 3.194861 CGGTGTGGTGTACATTATGGAG 58.805 50.000 0.00 0.00 42.24 3.86
211 212 2.678479 GCGGTGTGGTGTACATTATGGA 60.678 50.000 0.00 0.00 42.24 3.41
212 213 1.668751 GCGGTGTGGTGTACATTATGG 59.331 52.381 0.00 0.00 42.24 2.74
213 214 1.668751 GGCGGTGTGGTGTACATTATG 59.331 52.381 0.00 0.00 42.24 1.90
214 215 1.741055 CGGCGGTGTGGTGTACATTAT 60.741 52.381 0.00 0.00 42.24 1.28
215 216 0.390078 CGGCGGTGTGGTGTACATTA 60.390 55.000 0.00 0.00 42.24 1.90
216 217 1.669760 CGGCGGTGTGGTGTACATT 60.670 57.895 0.00 0.00 42.24 2.71
217 218 2.047655 CGGCGGTGTGGTGTACAT 60.048 61.111 0.00 0.00 42.24 2.29
218 219 4.302509 CCGGCGGTGTGGTGTACA 62.303 66.667 19.97 0.00 36.82 2.90
219 220 3.927163 CTCCGGCGGTGTGGTGTAC 62.927 68.421 27.32 0.00 0.00 2.90
220 221 3.687102 CTCCGGCGGTGTGGTGTA 61.687 66.667 27.32 2.13 0.00 2.90
222 223 3.642778 CTACTCCGGCGGTGTGGTG 62.643 68.421 35.92 23.63 31.55 4.17
223 224 3.379445 CTACTCCGGCGGTGTGGT 61.379 66.667 35.92 25.50 31.55 4.16
224 225 4.814294 GCTACTCCGGCGGTGTGG 62.814 72.222 35.92 33.75 31.55 4.17
225 226 3.989698 CTGCTACTCCGGCGGTGTG 62.990 68.421 35.92 26.72 31.55 3.82
226 227 3.760035 CTGCTACTCCGGCGGTGT 61.760 66.667 32.60 32.60 33.75 4.16
227 228 3.001902 TTCTGCTACTCCGGCGGTG 62.002 63.158 27.32 26.06 37.35 4.94
228 229 2.678934 TTCTGCTACTCCGGCGGT 60.679 61.111 27.32 10.46 37.35 5.68
229 230 2.202756 GTTCTGCTACTCCGGCGG 60.203 66.667 22.51 22.51 37.41 6.13
230 231 2.202756 GGTTCTGCTACTCCGGCG 60.203 66.667 0.00 0.00 0.00 6.46
231 232 1.142097 GAGGTTCTGCTACTCCGGC 59.858 63.158 0.00 0.00 0.00 6.13
232 233 1.817209 GGAGGTTCTGCTACTCCGG 59.183 63.158 0.00 0.00 41.15 5.14
246 247 2.005960 GACATCAGTCGACCGGGAGG 62.006 65.000 13.01 11.86 45.68 4.30
247 248 1.433879 GACATCAGTCGACCGGGAG 59.566 63.158 13.01 0.00 34.60 4.30
248 249 3.599584 GACATCAGTCGACCGGGA 58.400 61.111 13.01 8.31 34.60 5.14
254 255 6.433099 GCACATGCAAATGACATCAGTCGA 62.433 45.833 4.81 0.00 43.52 4.20
255 256 4.269076 GCACATGCAAATGACATCAGTCG 61.269 47.826 4.81 0.00 43.52 4.18
256 257 3.176708 GCACATGCAAATGACATCAGTC 58.823 45.455 4.81 0.00 42.14 3.51
257 258 2.094390 GGCACATGCAAATGACATCAGT 60.094 45.455 6.15 0.00 44.36 3.41
258 259 2.536365 GGCACATGCAAATGACATCAG 58.464 47.619 6.15 0.00 44.36 2.90
259 260 1.205179 GGGCACATGCAAATGACATCA 59.795 47.619 8.55 0.00 44.36 3.07
260 261 1.205179 TGGGCACATGCAAATGACATC 59.795 47.619 8.55 0.00 44.36 3.06
261 262 1.268066 TGGGCACATGCAAATGACAT 58.732 45.000 8.55 0.00 44.36 3.06
262 263 1.268066 ATGGGCACATGCAAATGACA 58.732 45.000 0.00 5.14 44.36 3.58
272 273 5.337169 GGTGTTACATAAAACATGGGCACAT 60.337 40.000 0.00 0.00 41.18 3.21
273 274 4.021894 GGTGTTACATAAAACATGGGCACA 60.022 41.667 0.00 0.00 41.18 4.57
274 275 4.490743 GGTGTTACATAAAACATGGGCAC 58.509 43.478 0.00 0.00 41.18 5.01
275 276 3.511934 GGGTGTTACATAAAACATGGGCA 59.488 43.478 0.00 0.00 41.18 5.36
276 277 3.767131 AGGGTGTTACATAAAACATGGGC 59.233 43.478 0.00 0.00 41.18 5.36
277 278 5.067283 GCTAGGGTGTTACATAAAACATGGG 59.933 44.000 0.00 0.00 41.18 4.00
278 279 5.650266 TGCTAGGGTGTTACATAAAACATGG 59.350 40.000 0.00 0.00 41.18 3.66
279 280 6.374333 ACTGCTAGGGTGTTACATAAAACATG 59.626 38.462 0.00 0.00 41.18 3.21
280 281 6.481643 ACTGCTAGGGTGTTACATAAAACAT 58.518 36.000 0.00 0.00 41.18 2.71
281 282 5.871834 ACTGCTAGGGTGTTACATAAAACA 58.128 37.500 0.00 0.00 37.03 2.83
282 283 7.064253 CACTACTGCTAGGGTGTTACATAAAAC 59.936 40.741 0.00 0.00 0.00 2.43
283 284 7.101054 CACTACTGCTAGGGTGTTACATAAAA 58.899 38.462 0.00 0.00 0.00 1.52
284 285 6.636705 CACTACTGCTAGGGTGTTACATAAA 58.363 40.000 0.00 0.00 0.00 1.40
285 286 5.394883 GCACTACTGCTAGGGTGTTACATAA 60.395 44.000 0.00 0.00 40.63 1.90
286 287 4.098960 GCACTACTGCTAGGGTGTTACATA 59.901 45.833 0.00 0.00 40.63 2.29
287 288 3.118738 GCACTACTGCTAGGGTGTTACAT 60.119 47.826 0.00 0.00 40.63 2.29
288 289 2.232941 GCACTACTGCTAGGGTGTTACA 59.767 50.000 0.00 0.00 40.63 2.41
289 290 2.734492 CGCACTACTGCTAGGGTGTTAC 60.734 54.545 0.00 0.00 41.77 2.50
290 291 1.475280 CGCACTACTGCTAGGGTGTTA 59.525 52.381 0.00 0.00 41.77 2.41
291 292 0.246635 CGCACTACTGCTAGGGTGTT 59.753 55.000 0.00 0.00 41.77 3.32
292 293 1.605058 CCGCACTACTGCTAGGGTGT 61.605 60.000 0.00 0.00 41.77 4.16
293 294 1.141881 CCGCACTACTGCTAGGGTG 59.858 63.158 0.00 0.00 41.77 4.61
294 295 2.058595 CCCGCACTACTGCTAGGGT 61.059 63.158 0.00 0.00 41.77 4.34
295 296 2.797278 CCCCGCACTACTGCTAGGG 61.797 68.421 5.37 5.37 44.14 3.53
296 297 2.017559 GACCCCGCACTACTGCTAGG 62.018 65.000 0.00 0.00 41.77 3.02
297 298 1.437986 GACCCCGCACTACTGCTAG 59.562 63.158 0.00 0.00 41.77 3.42
298 299 2.056223 GGACCCCGCACTACTGCTA 61.056 63.158 0.00 0.00 41.77 3.49
299 300 3.391382 GGACCCCGCACTACTGCT 61.391 66.667 0.00 0.00 41.77 4.24
300 301 4.468689 GGGACCCCGCACTACTGC 62.469 72.222 0.00 0.00 40.38 4.40
310 311 2.111251 GCAATAGCTCGGGACCCC 59.889 66.667 4.46 0.00 37.91 4.95
320 321 0.033504 TGTAGCGCCCTAGCAATAGC 59.966 55.000 2.29 0.00 39.83 2.97
321 322 1.937108 GCTGTAGCGCCCTAGCAATAG 60.937 57.143 18.75 1.49 39.83 1.73
322 323 0.033504 GCTGTAGCGCCCTAGCAATA 59.966 55.000 18.75 0.00 39.83 1.90
323 324 1.227674 GCTGTAGCGCCCTAGCAAT 60.228 57.895 18.75 0.00 39.83 3.56
324 325 2.186903 GCTGTAGCGCCCTAGCAA 59.813 61.111 18.75 0.00 39.83 3.91
332 333 7.894505 TACTGCTAAAGGTTAGCTGTAGCGC 62.895 48.000 23.34 0.00 46.16 5.92
333 334 3.676324 ACTGCTAAAGGTTAGCTGTAGCG 60.676 47.826 23.34 19.99 46.16 4.26
334 335 3.863041 ACTGCTAAAGGTTAGCTGTAGC 58.137 45.455 22.56 22.56 46.16 3.58
336 337 4.439700 CGCTACTGCTAAAGGTTAGCTGTA 60.440 45.833 25.34 25.34 46.16 2.74
338 339 2.860735 CGCTACTGCTAAAGGTTAGCTG 59.139 50.000 19.34 19.34 42.67 4.24
339 340 2.159085 CCGCTACTGCTAAAGGTTAGCT 60.159 50.000 18.13 0.00 40.95 3.32
340 341 2.202566 CCGCTACTGCTAAAGGTTAGC 58.797 52.381 12.12 12.12 40.76 3.09
341 342 3.187700 CACCGCTACTGCTAAAGGTTAG 58.812 50.000 0.00 0.00 36.97 2.34
342 343 2.093869 CCACCGCTACTGCTAAAGGTTA 60.094 50.000 0.00 0.00 36.97 2.85
343 344 1.338769 CCACCGCTACTGCTAAAGGTT 60.339 52.381 0.00 0.00 36.97 3.50
344 345 0.249398 CCACCGCTACTGCTAAAGGT 59.751 55.000 0.00 0.00 36.97 3.50
345 346 0.249398 ACCACCGCTACTGCTAAAGG 59.751 55.000 0.00 0.00 36.97 3.11
346 347 2.094762 AACCACCGCTACTGCTAAAG 57.905 50.000 0.00 0.00 36.97 1.85
347 348 2.147958 CAAACCACCGCTACTGCTAAA 58.852 47.619 0.00 0.00 36.97 1.85
348 349 1.345089 TCAAACCACCGCTACTGCTAA 59.655 47.619 0.00 0.00 36.97 3.09
349 350 0.970640 TCAAACCACCGCTACTGCTA 59.029 50.000 0.00 0.00 36.97 3.49
350 351 0.602905 GTCAAACCACCGCTACTGCT 60.603 55.000 0.00 0.00 36.97 4.24
351 352 1.574702 GGTCAAACCACCGCTACTGC 61.575 60.000 0.00 0.00 38.42 4.40
352 353 0.034896 AGGTCAAACCACCGCTACTG 59.965 55.000 0.00 0.00 41.95 2.74
353 354 0.034896 CAGGTCAAACCACCGCTACT 59.965 55.000 0.00 0.00 41.95 2.57
354 355 1.574702 GCAGGTCAAACCACCGCTAC 61.575 60.000 0.00 0.00 41.95 3.58
355 356 1.302192 GCAGGTCAAACCACCGCTA 60.302 57.895 0.00 0.00 41.95 4.26
356 357 2.594592 GCAGGTCAAACCACCGCT 60.595 61.111 0.00 0.00 41.95 5.52
357 358 4.025401 CGCAGGTCAAACCACCGC 62.025 66.667 0.00 0.00 41.95 5.68
358 359 4.025401 GCGCAGGTCAAACCACCG 62.025 66.667 0.30 1.95 41.95 4.94
359 360 1.302192 TAGCGCAGGTCAAACCACC 60.302 57.895 11.47 0.00 41.95 4.61
360 361 0.602905 AGTAGCGCAGGTCAAACCAC 60.603 55.000 11.47 0.00 41.95 4.16
361 362 0.602638 CAGTAGCGCAGGTCAAACCA 60.603 55.000 11.47 0.00 41.95 3.67
362 363 1.912371 GCAGTAGCGCAGGTCAAACC 61.912 60.000 11.47 0.00 40.68 3.27
363 364 1.497722 GCAGTAGCGCAGGTCAAAC 59.502 57.895 11.47 0.00 40.68 2.93
364 365 3.966215 GCAGTAGCGCAGGTCAAA 58.034 55.556 11.47 0.00 40.68 2.69
369 370 4.349573 ACTGAGTTAGCAGTAGCGCAGG 62.350 54.545 11.47 0.00 46.67 4.85
370 371 1.135257 ACTGAGTTAGCAGTAGCGCAG 60.135 52.381 11.47 0.00 46.67 5.18
371 372 0.888619 ACTGAGTTAGCAGTAGCGCA 59.111 50.000 11.47 0.00 46.67 6.09
372 373 3.723554 ACTGAGTTAGCAGTAGCGC 57.276 52.632 0.00 0.00 46.67 5.92
379 380 4.526650 TGACCACTGATAACTGAGTTAGCA 59.473 41.667 20.47 20.47 41.17 3.49
380 381 5.073311 TGACCACTGATAACTGAGTTAGC 57.927 43.478 13.27 13.27 35.33 3.09
381 382 9.823647 AATATTGACCACTGATAACTGAGTTAG 57.176 33.333 11.09 1.75 31.29 2.34
382 383 9.599866 CAATATTGACCACTGATAACTGAGTTA 57.400 33.333 10.04 7.60 32.36 2.24
383 384 7.066284 GCAATATTGACCACTGATAACTGAGTT 59.934 37.037 19.73 2.37 0.00 3.01
384 385 6.540189 GCAATATTGACCACTGATAACTGAGT 59.460 38.462 19.73 0.00 0.00 3.41
385 386 6.765036 AGCAATATTGACCACTGATAACTGAG 59.235 38.462 19.73 0.00 0.00 3.35
386 387 6.653020 AGCAATATTGACCACTGATAACTGA 58.347 36.000 19.73 0.00 0.00 3.41
387 388 6.292542 CGAGCAATATTGACCACTGATAACTG 60.293 42.308 19.73 0.00 0.00 3.16
388 389 5.755375 CGAGCAATATTGACCACTGATAACT 59.245 40.000 19.73 1.81 0.00 2.24
389 390 5.753438 TCGAGCAATATTGACCACTGATAAC 59.247 40.000 19.73 0.00 0.00 1.89
390 391 5.912892 TCGAGCAATATTGACCACTGATAA 58.087 37.500 19.73 0.00 0.00 1.75
391 392 5.529581 TCGAGCAATATTGACCACTGATA 57.470 39.130 19.73 0.00 0.00 2.15
392 393 4.375272 CTCGAGCAATATTGACCACTGAT 58.625 43.478 19.73 0.00 0.00 2.90
393 394 3.785486 CTCGAGCAATATTGACCACTGA 58.215 45.455 19.73 6.40 0.00 3.41
394 395 2.286294 GCTCGAGCAATATTGACCACTG 59.714 50.000 31.91 5.26 41.59 3.66
395 396 2.169352 AGCTCGAGCAATATTGACCACT 59.831 45.455 36.87 10.65 45.16 4.00
396 397 2.555199 AGCTCGAGCAATATTGACCAC 58.445 47.619 36.87 4.96 45.16 4.16
459 460 4.123506 GTTCCTGATGCTAAAGCTACTCC 58.876 47.826 3.26 0.00 42.66 3.85
807 4763 4.459337 GTCCAAGTAAATTCTGGTTCTGGG 59.541 45.833 0.00 0.00 0.00 4.45
825 4781 2.181521 GCGTGGAAACCGTGTCCAA 61.182 57.895 12.33 0.00 46.66 3.53
906 4875 1.063038 TGGTAGGTAGACCGCCCATTA 60.063 52.381 7.95 0.00 42.99 1.90
1092 5072 1.271054 GCTCCTGCTTGTTCTTGGAGA 60.271 52.381 11.03 0.00 45.07 3.71
1163 5143 1.501170 TGTTGTTTCCCATTCCCCAGA 59.499 47.619 0.00 0.00 0.00 3.86
1225 5211 1.599518 CTTGGTGCGTTGCCTGGTA 60.600 57.895 0.00 0.00 0.00 3.25
1230 5216 2.594592 ACCTCTTGGTGCGTTGCC 60.595 61.111 0.00 0.00 46.51 4.52
1594 5583 5.965091 AGACAAGCTTCTTTAGGTACCCTAT 59.035 40.000 8.74 0.00 35.87 2.57
1599 5588 4.895961 ACCAGACAAGCTTCTTTAGGTAC 58.104 43.478 0.00 0.00 33.29 3.34
1618 5607 4.223556 TGTTGTTGACAAGACCTAACCA 57.776 40.909 0.00 0.00 36.39 3.67
1664 5653 6.819146 GGTGAGTTTAGTGAGATTCCCTAAAG 59.181 42.308 0.00 0.00 32.85 1.85
1750 5739 9.765795 ATTAAGGGACATCTCTCGTAAATTTAG 57.234 33.333 0.00 0.00 26.40 1.85
1765 5754 8.906867 CATGAGTTCATTTACATTAAGGGACAT 58.093 33.333 0.00 0.00 33.61 3.06
1823 5812 6.097554 CCAGAGATACAAGTGAGTGAGGTTAT 59.902 42.308 0.00 0.00 0.00 1.89
1851 5840 4.994852 GGAATAGGCCCAAAAAGTTTGTTC 59.005 41.667 0.00 0.00 0.00 3.18
1868 6001 6.041069 CAGGTAACCTAGTTCTGGAGGAATAG 59.959 46.154 0.00 0.00 36.61 1.73
2021 6298 4.537135 TTCACCAAGTAGCCTAGTTCTG 57.463 45.455 0.00 0.00 0.00 3.02
2184 6677 5.146010 AGAGCTCGAGTTTCTCAAGATTT 57.854 39.130 15.13 0.00 0.00 2.17
2203 6696 3.570550 CCGGAGAGGTAGTTATTGGAGAG 59.429 52.174 0.00 0.00 34.51 3.20
2258 6751 7.986085 TCTTCTGCAGTTAAATTCTTTAGCT 57.014 32.000 14.67 0.00 37.18 3.32
2286 6779 4.314522 TGGCAAAGATCCATTCAGGTAA 57.685 40.909 0.00 0.00 39.02 2.85
2299 6792 5.068987 AGTTTAACAAGCTTGATGGCAAAGA 59.931 36.000 32.50 0.95 32.73 2.52
2327 6820 0.034059 ACGAACTCTGACCAGGCTTG 59.966 55.000 0.00 0.00 0.00 4.01
2334 6827 4.307432 TCATTTCAAGACGAACTCTGACC 58.693 43.478 0.00 0.00 31.73 4.02
2381 6874 2.149578 GATTTGGATGAGCTCCCATCG 58.850 52.381 12.15 0.00 44.23 3.84
2481 6974 8.774586 GTGATGTTGTTGTTTGAGATACTTAGT 58.225 33.333 0.00 0.00 0.00 2.24
2542 7035 8.424918 TGATGAAAGATCAAGTATCCTTAGTCC 58.575 37.037 0.00 0.00 39.49 3.85
2543 7036 9.823647 TTGATGAAAGATCAAGTATCCTTAGTC 57.176 33.333 0.00 0.00 39.49 2.59
2630 7123 0.737715 GAGCGAATTGTCTGCGAGGT 60.738 55.000 0.00 0.00 0.00 3.85
2700 7193 7.201732 CCGCTTAGGTAATTTGATGACAAATCT 60.202 37.037 8.31 5.16 43.61 2.40
2724 7217 4.457603 TCAATTGATCCTTGTACCAAACCG 59.542 41.667 3.38 0.00 0.00 4.44
2823 7316 4.932146 ACTTGTCCATTAAGTTGTGCAAC 58.068 39.130 6.94 6.94 41.45 4.17
2836 7329 7.595819 TTTCACTTAAATCCAACTTGTCCAT 57.404 32.000 0.00 0.00 0.00 3.41
2837 7330 7.411486 TTTTCACTTAAATCCAACTTGTCCA 57.589 32.000 0.00 0.00 0.00 4.02
2838 7331 8.887036 AATTTTCACTTAAATCCAACTTGTCC 57.113 30.769 0.00 0.00 0.00 4.02
2859 7352 5.723887 TGGTATTGCCCCACTAAATGAATTT 59.276 36.000 0.00 0.00 36.04 1.82
2896 7389 6.769512 TCAAAGTTTCTAGCATGGTTAGACT 58.230 36.000 1.12 0.00 0.00 3.24
2901 7394 7.530426 AAGATTCAAAGTTTCTAGCATGGTT 57.470 32.000 1.12 0.00 0.00 3.67
2942 7435 0.107703 TGACGATGGGATCAAGCCAC 60.108 55.000 0.00 0.00 0.00 5.01
2958 7451 6.375455 TCAGGCTTTCCATTCTCTTAAATGAC 59.625 38.462 0.00 0.00 38.64 3.06
3121 7614 0.704076 TTCCCTCCATTCTGGGTTGG 59.296 55.000 0.00 0.00 43.74 3.77
3126 7619 3.939740 TTCATCTTCCCTCCATTCTGG 57.060 47.619 0.00 0.00 39.43 3.86
3209 7702 6.419484 TCTCATGTCGGAACACCAATATAT 57.581 37.500 0.00 0.00 38.48 0.86
3357 7850 0.538118 CCCCTGTTCCAATGCAATGG 59.462 55.000 15.12 15.12 42.12 3.16
3366 7859 2.089408 AGATCCATATCCCCCTGTTCCA 60.089 50.000 0.00 0.00 31.98 3.53
3372 7865 3.406152 TGTAGACAGATCCATATCCCCCT 59.594 47.826 0.00 0.00 31.98 4.79
3409 7902 3.768406 TCACCGCAAATATTTCACATGC 58.232 40.909 0.00 0.00 0.00 4.06
3594 8087 6.183360 TGGATCTCAATATTTCCGCTAAGTCA 60.183 38.462 0.00 0.00 0.00 3.41
3767 8260 1.009829 GTCCGAAATGCAAGCTCGAT 58.990 50.000 14.78 0.00 34.52 3.59
4203 8748 1.340889 TCAAGGCATTGAACTGCAACC 59.659 47.619 12.07 0.00 42.47 3.77
4543 9089 2.696526 ACAGGAGAAGTAGGGACACA 57.303 50.000 0.00 0.00 0.00 3.72
4629 9175 8.700644 CAACGTTTGTATATGGATTAGAGTAGC 58.299 37.037 0.00 0.00 0.00 3.58
4759 9314 2.100631 GTGATGAACTCGGGTGGCG 61.101 63.158 0.00 0.00 0.00 5.69
4792 9347 9.226345 GTGAAATCAGCCTCTAATTTTAATTCG 57.774 33.333 0.00 0.00 0.00 3.34
4848 9476 2.418910 CGAGTCCAGCCACCGAGAT 61.419 63.158 0.00 0.00 0.00 2.75
4931 9559 0.242017 GGCGGGCATCTTCATATTGC 59.758 55.000 0.00 0.00 35.64 3.56
4933 9561 2.165167 CATGGCGGGCATCTTCATATT 58.835 47.619 14.79 0.00 0.00 1.28
4988 9616 0.820871 GACGGTGAAGAGAGGAGCAT 59.179 55.000 0.00 0.00 0.00 3.79
5111 9741 8.364142 GGACTGTAGAAGACATAGATATTGCTT 58.636 37.037 0.00 0.00 37.45 3.91
5274 10094 5.620822 CCGACATGTTTCGCAAATGTATATG 59.379 40.000 0.00 0.00 37.70 1.78


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.