Multiple sequence alignment - TraesCS2A01G010200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G010200 chr2A 100.000 4714 0 0 1 4714 3968583 3963870 0.000000e+00 8706.0
1 TraesCS2A01G010200 chr2D 94.223 2008 86 16 2726 4714 5326831 5324835 0.000000e+00 3038.0
2 TraesCS2A01G010200 chr2D 88.074 1568 94 43 1133 2677 5328335 5326838 0.000000e+00 1773.0
3 TraesCS2A01G010200 chr2D 78.401 588 94 17 1598 2181 547218412 547218970 7.510000e-93 351.0
4 TraesCS2A01G010200 chr2D 82.169 415 34 17 592 998 5328853 5328471 2.120000e-83 320.0
5 TraesCS2A01G010200 chr2D 79.389 131 13 7 479 609 5331001 5330885 3.910000e-11 80.5
6 TraesCS2A01G010200 chr2B 91.984 1285 73 15 2726 3996 6264081 6262813 0.000000e+00 1775.0
7 TraesCS2A01G010200 chr2B 87.264 1539 110 44 1160 2678 6265559 6264087 0.000000e+00 1677.0
8 TraesCS2A01G010200 chr2B 88.511 705 50 11 4028 4714 6262359 6261668 0.000000e+00 824.0
9 TraesCS2A01G010200 chr3B 78.119 1074 168 35 1598 2644 793273024 793271991 1.860000e-173 619.0
10 TraesCS2A01G010200 chr3B 77.747 1074 173 34 1598 2644 402460573 402461607 2.430000e-167 599.0
11 TraesCS2A01G010200 chr4A 77.747 1074 173 33 1598 2644 615519816 615520850 2.430000e-167 599.0
12 TraesCS2A01G010200 chr6B 80.050 807 118 23 1857 2644 522513952 522513170 4.120000e-155 558.0
13 TraesCS2A01G010200 chr3D 78.174 449 73 15 1598 2044 308777279 308776854 3.620000e-66 263.0
14 TraesCS2A01G010200 chr3D 75.579 475 76 19 2198 2644 308776861 308776399 1.030000e-46 198.0
15 TraesCS2A01G010200 chr7B 76.581 427 67 16 2243 2644 683943215 683943633 2.220000e-48 204.0
16 TraesCS2A01G010200 chr6D 75.789 475 76 18 2198 2644 27487992 27488455 2.220000e-48 204.0
17 TraesCS2A01G010200 chr6D 86.047 86 10 2 1219 1303 38884667 38884751 1.810000e-14 91.6
18 TraesCS2A01G010200 chr6A 75.822 426 72 17 2243 2644 521443795 521443377 2.240000e-43 187.0
19 TraesCS2A01G010200 chr6A 86.047 86 10 2 1219 1303 51406350 51406434 1.810000e-14 91.6
20 TraesCS2A01G010200 chr1D 92.308 39 1 1 487 525 411124097 411124133 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G010200 chr2A 3963870 3968583 4713 True 8706.000000 8706 100.00000 1 4714 1 chr2A.!!$R1 4713
1 TraesCS2A01G010200 chr2D 5324835 5331001 6166 True 1302.875000 3038 85.96375 479 4714 4 chr2D.!!$R1 4235
2 TraesCS2A01G010200 chr2D 547218412 547218970 558 False 351.000000 351 78.40100 1598 2181 1 chr2D.!!$F1 583
3 TraesCS2A01G010200 chr2B 6261668 6265559 3891 True 1425.333333 1775 89.25300 1160 4714 3 chr2B.!!$R1 3554
4 TraesCS2A01G010200 chr3B 793271991 793273024 1033 True 619.000000 619 78.11900 1598 2644 1 chr3B.!!$R1 1046
5 TraesCS2A01G010200 chr3B 402460573 402461607 1034 False 599.000000 599 77.74700 1598 2644 1 chr3B.!!$F1 1046
6 TraesCS2A01G010200 chr4A 615519816 615520850 1034 False 599.000000 599 77.74700 1598 2644 1 chr4A.!!$F1 1046
7 TraesCS2A01G010200 chr6B 522513170 522513952 782 True 558.000000 558 80.05000 1857 2644 1 chr6B.!!$R1 787
8 TraesCS2A01G010200 chr3D 308776399 308777279 880 True 230.500000 263 76.87650 1598 2644 2 chr3D.!!$R1 1046

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
206 207 0.028242 CGGTGCTGCTACTCTACTCG 59.972 60.000 0.00 0.0 0.00 4.18 F
218 219 0.035739 TCTACTCGTTTTGGTGGGGC 59.964 55.000 0.00 0.0 0.00 5.80 F
1024 3095 0.104120 GCACCACCCACAAAGGTTTC 59.896 55.000 0.00 0.0 38.39 2.78 F
1114 3185 0.107752 CTCCCTGCTCTTCAAGGCTC 60.108 60.000 0.00 0.0 0.00 4.70 F
2281 4431 0.178992 TACACTGCTTGCCTTGCCTT 60.179 50.000 0.00 0.0 0.00 4.35 F
3086 5291 1.448893 GGGCTGCGTCAAACGGATA 60.449 57.895 1.33 0.0 42.05 2.59 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1113 3184 0.032515 TCCCACCTCCGCAAGATAGA 60.033 55.000 0.00 0.0 43.02 1.98 R
1114 3185 0.105039 GTCCCACCTCCGCAAGATAG 59.895 60.000 0.00 0.0 43.02 2.08 R
2782 4987 0.404812 ACAGAGGGACGAGGTACACT 59.595 55.000 0.00 0.0 0.00 3.55 R
2787 4992 0.471211 TTGGAACAGAGGGACGAGGT 60.471 55.000 0.00 0.0 42.39 3.85 R
3323 5528 0.472925 TGGTCAGTAGCCCCTTGTCA 60.473 55.000 0.00 0.0 0.00 3.58 R
4341 6992 2.114616 TGCCATGGGAAGTTGTTTTGT 58.885 42.857 15.13 0.0 0.00 2.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.195041 TGAGCGCTTGTGTCTGTAC 57.805 52.632 13.26 0.00 0.00 2.90
19 20 0.387565 TGAGCGCTTGTGTCTGTACA 59.612 50.000 13.26 0.00 0.00 2.90
20 21 1.063806 GAGCGCTTGTGTCTGTACAG 58.936 55.000 17.17 17.17 35.91 2.74
21 22 0.673985 AGCGCTTGTGTCTGTACAGA 59.326 50.000 21.74 21.74 35.91 3.41
22 23 1.273606 AGCGCTTGTGTCTGTACAGAT 59.726 47.619 27.54 6.44 39.97 2.90
23 24 1.391485 GCGCTTGTGTCTGTACAGATG 59.609 52.381 27.54 15.85 39.97 2.90
24 25 2.677199 CGCTTGTGTCTGTACAGATGT 58.323 47.619 27.54 0.00 39.97 3.06
25 26 3.059884 CGCTTGTGTCTGTACAGATGTT 58.940 45.455 27.54 0.00 39.97 2.71
26 27 4.234574 CGCTTGTGTCTGTACAGATGTTA 58.765 43.478 27.54 12.40 39.97 2.41
27 28 4.684242 CGCTTGTGTCTGTACAGATGTTAA 59.316 41.667 27.54 18.00 39.97 2.01
28 29 5.176774 CGCTTGTGTCTGTACAGATGTTAAA 59.823 40.000 27.54 16.07 39.97 1.52
29 30 6.292649 CGCTTGTGTCTGTACAGATGTTAAAA 60.293 38.462 27.54 14.42 39.97 1.52
30 31 7.414436 GCTTGTGTCTGTACAGATGTTAAAAA 58.586 34.615 27.54 13.99 39.97 1.94
51 52 5.385509 AAAAAGGTGACGGGATTGTTATG 57.614 39.130 0.00 0.00 0.00 1.90
52 53 2.710096 AGGTGACGGGATTGTTATGG 57.290 50.000 0.00 0.00 0.00 2.74
53 54 1.211949 AGGTGACGGGATTGTTATGGG 59.788 52.381 0.00 0.00 0.00 4.00
54 55 1.021968 GTGACGGGATTGTTATGGGC 58.978 55.000 0.00 0.00 0.00 5.36
55 56 0.462937 TGACGGGATTGTTATGGGCG 60.463 55.000 0.00 0.00 0.00 6.13
56 57 1.153046 ACGGGATTGTTATGGGCGG 60.153 57.895 0.00 0.00 0.00 6.13
57 58 2.551912 CGGGATTGTTATGGGCGGC 61.552 63.158 0.00 0.00 0.00 6.53
58 59 1.454847 GGGATTGTTATGGGCGGCA 60.455 57.895 12.47 0.00 0.00 5.69
59 60 1.455383 GGGATTGTTATGGGCGGCAG 61.455 60.000 12.47 0.00 0.00 4.85
60 61 1.455383 GGATTGTTATGGGCGGCAGG 61.455 60.000 12.47 0.00 0.00 4.85
61 62 0.751643 GATTGTTATGGGCGGCAGGT 60.752 55.000 12.47 0.00 0.00 4.00
62 63 0.751643 ATTGTTATGGGCGGCAGGTC 60.752 55.000 12.47 0.00 0.00 3.85
63 64 2.895372 GTTATGGGCGGCAGGTCG 60.895 66.667 12.47 0.00 0.00 4.79
64 65 3.395702 TTATGGGCGGCAGGTCGT 61.396 61.111 12.47 0.00 0.00 4.34
65 66 2.059190 TTATGGGCGGCAGGTCGTA 61.059 57.895 12.47 0.00 0.00 3.43
66 67 2.023414 TTATGGGCGGCAGGTCGTAG 62.023 60.000 12.47 0.00 0.00 3.51
69 70 4.078516 GGCGGCAGGTCGTAGGTT 62.079 66.667 3.07 0.00 0.00 3.50
70 71 2.713967 GGCGGCAGGTCGTAGGTTA 61.714 63.158 3.07 0.00 0.00 2.85
71 72 1.517913 GCGGCAGGTCGTAGGTTAC 60.518 63.158 0.00 0.00 0.00 2.50
72 73 1.941999 GCGGCAGGTCGTAGGTTACT 61.942 60.000 0.00 0.00 0.00 2.24
73 74 0.179145 CGGCAGGTCGTAGGTTACTG 60.179 60.000 0.00 0.00 0.00 2.74
74 75 0.893447 GGCAGGTCGTAGGTTACTGT 59.107 55.000 0.00 0.00 0.00 3.55
75 76 1.274447 GGCAGGTCGTAGGTTACTGTT 59.726 52.381 0.00 0.00 0.00 3.16
76 77 2.289257 GGCAGGTCGTAGGTTACTGTTT 60.289 50.000 0.00 0.00 0.00 2.83
77 78 2.735134 GCAGGTCGTAGGTTACTGTTTG 59.265 50.000 0.00 0.00 0.00 2.93
78 79 3.553508 GCAGGTCGTAGGTTACTGTTTGA 60.554 47.826 0.00 0.00 0.00 2.69
79 80 4.817517 CAGGTCGTAGGTTACTGTTTGAT 58.182 43.478 0.00 0.00 0.00 2.57
80 81 5.235516 CAGGTCGTAGGTTACTGTTTGATT 58.764 41.667 0.00 0.00 0.00 2.57
81 82 5.120208 CAGGTCGTAGGTTACTGTTTGATTG 59.880 44.000 0.00 0.00 0.00 2.67
82 83 5.011329 AGGTCGTAGGTTACTGTTTGATTGA 59.989 40.000 0.00 0.00 0.00 2.57
83 84 5.873164 GGTCGTAGGTTACTGTTTGATTGAT 59.127 40.000 0.00 0.00 0.00 2.57
84 85 6.183360 GGTCGTAGGTTACTGTTTGATTGATG 60.183 42.308 0.00 0.00 0.00 3.07
85 86 5.872617 TCGTAGGTTACTGTTTGATTGATGG 59.127 40.000 0.00 0.00 0.00 3.51
86 87 5.642063 CGTAGGTTACTGTTTGATTGATGGT 59.358 40.000 0.00 0.00 0.00 3.55
87 88 6.814644 CGTAGGTTACTGTTTGATTGATGGTA 59.185 38.462 0.00 0.00 0.00 3.25
88 89 7.201496 CGTAGGTTACTGTTTGATTGATGGTAC 60.201 40.741 0.00 0.00 0.00 3.34
89 90 6.779860 AGGTTACTGTTTGATTGATGGTACT 58.220 36.000 0.00 0.00 0.00 2.73
90 91 7.231467 AGGTTACTGTTTGATTGATGGTACTT 58.769 34.615 0.00 0.00 0.00 2.24
91 92 7.724061 AGGTTACTGTTTGATTGATGGTACTTT 59.276 33.333 0.00 0.00 0.00 2.66
92 93 8.357402 GGTTACTGTTTGATTGATGGTACTTTT 58.643 33.333 0.00 0.00 0.00 2.27
93 94 9.744468 GTTACTGTTTGATTGATGGTACTTTTT 57.256 29.630 0.00 0.00 0.00 1.94
94 95 9.743057 TTACTGTTTGATTGATGGTACTTTTTG 57.257 29.630 0.00 0.00 0.00 2.44
95 96 6.701400 ACTGTTTGATTGATGGTACTTTTTGC 59.299 34.615 0.00 0.00 0.00 3.68
96 97 6.577103 TGTTTGATTGATGGTACTTTTTGCA 58.423 32.000 0.00 0.00 0.00 4.08
97 98 7.044181 TGTTTGATTGATGGTACTTTTTGCAA 58.956 30.769 0.00 0.00 0.00 4.08
98 99 7.224362 TGTTTGATTGATGGTACTTTTTGCAAG 59.776 33.333 0.00 0.00 0.00 4.01
99 100 6.403866 TGATTGATGGTACTTTTTGCAAGT 57.596 33.333 0.00 0.00 0.00 3.16
100 101 7.517614 TGATTGATGGTACTTTTTGCAAGTA 57.482 32.000 0.00 0.00 0.00 2.24
108 109 6.149504 GTACTTTTTGCAAGTACTCCTACG 57.850 41.667 16.54 0.00 45.51 3.51
109 110 4.700700 ACTTTTTGCAAGTACTCCTACGT 58.299 39.130 0.00 0.00 0.00 3.57
110 111 5.846203 ACTTTTTGCAAGTACTCCTACGTA 58.154 37.500 0.00 0.00 0.00 3.57
111 112 5.693555 ACTTTTTGCAAGTACTCCTACGTAC 59.306 40.000 0.00 0.00 39.97 3.67
112 113 3.476295 TTGCAAGTACTCCTACGTACG 57.524 47.619 15.01 15.01 43.42 3.67
113 114 2.426522 TGCAAGTACTCCTACGTACGT 58.573 47.619 25.98 25.98 43.42 3.57
114 115 2.160219 TGCAAGTACTCCTACGTACGTG 59.840 50.000 30.25 18.87 45.99 4.49
115 116 2.160417 GCAAGTACTCCTACGTACGTGT 59.840 50.000 30.25 20.79 45.42 4.49
116 117 3.370978 GCAAGTACTCCTACGTACGTGTA 59.629 47.826 30.25 19.76 45.42 2.90
117 118 4.142902 GCAAGTACTCCTACGTACGTGTAA 60.143 45.833 30.25 10.25 45.42 2.41
118 119 5.616866 GCAAGTACTCCTACGTACGTGTAAA 60.617 44.000 30.25 9.86 45.42 2.01
119 120 6.546395 CAAGTACTCCTACGTACGTGTAAAT 58.454 40.000 30.25 15.05 43.42 1.40
120 121 7.676338 GCAAGTACTCCTACGTACGTGTAAATA 60.676 40.741 30.25 14.08 45.42 1.40
121 122 7.470289 AGTACTCCTACGTACGTGTAAATAG 57.530 40.000 30.25 17.73 43.42 1.73
122 123 7.265673 AGTACTCCTACGTACGTGTAAATAGA 58.734 38.462 30.25 14.04 43.42 1.98
123 124 6.985188 ACTCCTACGTACGTGTAAATAGAA 57.015 37.500 30.25 6.36 0.00 2.10
124 125 7.009568 ACTCCTACGTACGTGTAAATAGAAG 57.990 40.000 30.25 14.18 0.00 2.85
125 126 6.818644 ACTCCTACGTACGTGTAAATAGAAGA 59.181 38.462 30.25 10.86 0.00 2.87
126 127 7.334421 ACTCCTACGTACGTGTAAATAGAAGAA 59.666 37.037 30.25 4.83 0.00 2.52
127 128 8.039603 TCCTACGTACGTGTAAATAGAAGAAA 57.960 34.615 30.25 4.37 0.00 2.52
128 129 8.177663 TCCTACGTACGTGTAAATAGAAGAAAG 58.822 37.037 30.25 13.76 0.00 2.62
129 130 8.177663 CCTACGTACGTGTAAATAGAAGAAAGA 58.822 37.037 30.25 3.30 0.00 2.52
130 131 9.546909 CTACGTACGTGTAAATAGAAGAAAGAA 57.453 33.333 30.25 2.94 0.00 2.52
131 132 8.801715 ACGTACGTGTAAATAGAAGAAAGAAA 57.198 30.769 22.14 0.00 0.00 2.52
132 133 8.909671 ACGTACGTGTAAATAGAAGAAAGAAAG 58.090 33.333 22.14 0.00 0.00 2.62
133 134 8.371053 CGTACGTGTAAATAGAAGAAAGAAAGG 58.629 37.037 7.22 0.00 0.00 3.11
134 135 9.415544 GTACGTGTAAATAGAAGAAAGAAAGGA 57.584 33.333 0.00 0.00 0.00 3.36
135 136 8.535690 ACGTGTAAATAGAAGAAAGAAAGGAG 57.464 34.615 0.00 0.00 0.00 3.69
136 137 8.365647 ACGTGTAAATAGAAGAAAGAAAGGAGA 58.634 33.333 0.00 0.00 0.00 3.71
137 138 9.372369 CGTGTAAATAGAAGAAAGAAAGGAGAT 57.628 33.333 0.00 0.00 0.00 2.75
143 144 9.460019 AATAGAAGAAAGAAAGGAGATGAAAGG 57.540 33.333 0.00 0.00 0.00 3.11
144 145 6.846988 AGAAGAAAGAAAGGAGATGAAAGGT 58.153 36.000 0.00 0.00 0.00 3.50
145 146 6.714356 AGAAGAAAGAAAGGAGATGAAAGGTG 59.286 38.462 0.00 0.00 0.00 4.00
146 147 4.764308 AGAAAGAAAGGAGATGAAAGGTGC 59.236 41.667 0.00 0.00 0.00 5.01
147 148 3.078891 AGAAAGGAGATGAAAGGTGCC 57.921 47.619 0.00 0.00 0.00 5.01
148 149 1.740025 GAAAGGAGATGAAAGGTGCCG 59.260 52.381 0.00 0.00 0.00 5.69
149 150 0.678048 AAGGAGATGAAAGGTGCCGC 60.678 55.000 0.00 0.00 0.00 6.53
150 151 1.078143 GGAGATGAAAGGTGCCGCT 60.078 57.895 0.00 0.00 0.00 5.52
151 152 0.178068 GGAGATGAAAGGTGCCGCTA 59.822 55.000 0.00 0.00 0.00 4.26
152 153 1.291132 GAGATGAAAGGTGCCGCTAC 58.709 55.000 0.00 0.00 0.00 3.58
153 154 0.107654 AGATGAAAGGTGCCGCTACC 60.108 55.000 4.36 4.36 41.17 3.18
154 155 1.077716 ATGAAAGGTGCCGCTACCC 60.078 57.895 7.99 0.00 41.83 3.69
155 156 2.818274 GAAAGGTGCCGCTACCCG 60.818 66.667 7.99 0.00 41.83 5.28
156 157 3.600898 GAAAGGTGCCGCTACCCGT 62.601 63.158 7.99 0.00 41.83 5.28
157 158 3.186656 AAAGGTGCCGCTACCCGTT 62.187 57.895 7.99 0.55 41.83 4.44
158 159 2.685804 AAAGGTGCCGCTACCCGTTT 62.686 55.000 7.99 2.46 41.83 3.60
159 160 2.670592 GGTGCCGCTACCCGTTTT 60.671 61.111 0.00 0.00 34.56 2.43
160 161 2.559330 GTGCCGCTACCCGTTTTG 59.441 61.111 0.00 0.00 34.38 2.44
161 162 2.670251 TGCCGCTACCCGTTTTGG 60.670 61.111 0.00 0.00 34.38 3.28
162 163 2.670592 GCCGCTACCCGTTTTGGT 60.671 61.111 0.00 0.00 42.62 3.67
163 164 2.263021 GCCGCTACCCGTTTTGGTT 61.263 57.895 0.00 0.00 39.91 3.67
164 165 1.577421 CCGCTACCCGTTTTGGTTG 59.423 57.895 0.00 0.00 39.91 3.77
165 166 0.885596 CCGCTACCCGTTTTGGTTGA 60.886 55.000 0.00 0.00 39.91 3.18
166 167 1.161843 CGCTACCCGTTTTGGTTGAT 58.838 50.000 0.00 0.00 39.91 2.57
167 168 1.538075 CGCTACCCGTTTTGGTTGATT 59.462 47.619 0.00 0.00 39.91 2.57
168 169 2.667171 CGCTACCCGTTTTGGTTGATTG 60.667 50.000 0.00 0.00 39.91 2.67
169 170 2.554893 GCTACCCGTTTTGGTTGATTGA 59.445 45.455 0.00 0.00 39.91 2.57
170 171 3.610821 GCTACCCGTTTTGGTTGATTGAC 60.611 47.826 0.00 0.00 39.91 3.18
171 172 1.684450 ACCCGTTTTGGTTGATTGACC 59.316 47.619 0.00 0.00 40.23 4.02
172 173 1.000394 CCCGTTTTGGTTGATTGACCC 60.000 52.381 0.00 0.00 39.01 4.46
173 174 1.335506 CCGTTTTGGTTGATTGACCCG 60.336 52.381 0.00 0.00 39.01 5.28
174 175 1.604755 CGTTTTGGTTGATTGACCCGA 59.395 47.619 0.00 0.00 39.01 5.14
175 176 2.603652 CGTTTTGGTTGATTGACCCGAC 60.604 50.000 0.00 0.00 39.01 4.79
176 177 1.611519 TTTGGTTGATTGACCCGACC 58.388 50.000 0.00 0.00 39.01 4.79
177 178 0.250989 TTGGTTGATTGACCCGACCC 60.251 55.000 0.00 0.00 39.01 4.46
178 179 1.743995 GGTTGATTGACCCGACCCG 60.744 63.158 0.00 0.00 32.98 5.28
179 180 1.294138 GTTGATTGACCCGACCCGA 59.706 57.895 0.00 0.00 0.00 5.14
180 181 1.017701 GTTGATTGACCCGACCCGAC 61.018 60.000 0.00 0.00 0.00 4.79
181 182 2.175035 TTGATTGACCCGACCCGACC 62.175 60.000 0.00 0.00 0.00 4.79
182 183 3.381333 GATTGACCCGACCCGACCC 62.381 68.421 0.00 0.00 0.00 4.46
198 199 4.814294 CCGACCCGGTGCTGCTAC 62.814 72.222 0.00 0.00 42.73 3.58
199 200 3.760035 CGACCCGGTGCTGCTACT 61.760 66.667 0.00 0.00 0.00 2.57
200 201 2.184579 GACCCGGTGCTGCTACTC 59.815 66.667 0.00 0.00 0.00 2.59
201 202 2.283966 ACCCGGTGCTGCTACTCT 60.284 61.111 0.00 0.00 0.00 3.24
202 203 1.000019 ACCCGGTGCTGCTACTCTA 60.000 57.895 0.00 0.00 0.00 2.43
203 204 1.321074 ACCCGGTGCTGCTACTCTAC 61.321 60.000 0.00 0.00 0.00 2.59
204 205 1.038130 CCCGGTGCTGCTACTCTACT 61.038 60.000 0.00 0.00 0.00 2.57
205 206 0.382515 CCGGTGCTGCTACTCTACTC 59.617 60.000 0.00 0.00 0.00 2.59
206 207 0.028242 CGGTGCTGCTACTCTACTCG 59.972 60.000 0.00 0.00 0.00 4.18
207 208 1.096416 GGTGCTGCTACTCTACTCGT 58.904 55.000 0.00 0.00 0.00 4.18
208 209 1.473278 GGTGCTGCTACTCTACTCGTT 59.527 52.381 0.00 0.00 0.00 3.85
209 210 2.094649 GGTGCTGCTACTCTACTCGTTT 60.095 50.000 0.00 0.00 0.00 3.60
210 211 3.576648 GTGCTGCTACTCTACTCGTTTT 58.423 45.455 0.00 0.00 0.00 2.43
211 212 3.365220 GTGCTGCTACTCTACTCGTTTTG 59.635 47.826 0.00 0.00 0.00 2.44
212 213 2.924290 GCTGCTACTCTACTCGTTTTGG 59.076 50.000 0.00 0.00 0.00 3.28
213 214 3.614390 GCTGCTACTCTACTCGTTTTGGT 60.614 47.826 0.00 0.00 0.00 3.67
214 215 3.909430 TGCTACTCTACTCGTTTTGGTG 58.091 45.455 0.00 0.00 0.00 4.17
215 216 3.251571 GCTACTCTACTCGTTTTGGTGG 58.748 50.000 0.00 0.00 0.00 4.61
216 217 2.833631 ACTCTACTCGTTTTGGTGGG 57.166 50.000 0.00 0.00 0.00 4.61
217 218 1.346722 ACTCTACTCGTTTTGGTGGGG 59.653 52.381 0.00 0.00 0.00 4.96
218 219 0.035739 TCTACTCGTTTTGGTGGGGC 59.964 55.000 0.00 0.00 0.00 5.80
219 220 1.296056 CTACTCGTTTTGGTGGGGCG 61.296 60.000 0.00 0.00 0.00 6.13
220 221 2.734948 TACTCGTTTTGGTGGGGCGG 62.735 60.000 0.00 0.00 0.00 6.13
221 222 3.835790 CTCGTTTTGGTGGGGCGGA 62.836 63.158 0.00 0.00 0.00 5.54
222 223 3.361977 CGTTTTGGTGGGGCGGAG 61.362 66.667 0.00 0.00 0.00 4.63
237 238 2.597903 GAGCCCCATGGGTTCCTC 59.402 66.667 29.33 24.39 45.61 3.71
238 239 3.406595 GAGCCCCATGGGTTCCTCG 62.407 68.421 29.33 13.83 45.61 4.63
239 240 3.728373 GCCCCATGGGTTCCTCGT 61.728 66.667 29.33 0.00 46.51 4.18
240 241 2.272146 CCCCATGGGTTCCTCGTG 59.728 66.667 29.33 7.54 38.25 4.35
241 242 2.438434 CCCATGGGTTCCTCGTGC 60.438 66.667 23.93 0.00 0.00 5.34
242 243 2.671070 CCATGGGTTCCTCGTGCT 59.329 61.111 2.85 0.00 0.00 4.40
243 244 1.450312 CCATGGGTTCCTCGTGCTC 60.450 63.158 2.85 0.00 0.00 4.26
244 245 1.450312 CATGGGTTCCTCGTGCTCC 60.450 63.158 0.00 0.00 0.00 4.70
245 246 2.670148 ATGGGTTCCTCGTGCTCCC 61.670 63.158 0.00 0.00 38.68 4.30
246 247 4.452733 GGGTTCCTCGTGCTCCCG 62.453 72.222 0.00 0.00 0.00 5.14
247 248 4.452733 GGTTCCTCGTGCTCCCGG 62.453 72.222 0.00 0.00 0.00 5.73
248 249 4.452733 GTTCCTCGTGCTCCCGGG 62.453 72.222 16.85 16.85 0.00 5.73
265 266 3.756727 GTCCGAGGTGGTCCGGTC 61.757 72.222 0.00 0.00 45.48 4.79
285 286 4.337060 CGCGTGTCCGAGGTGTGA 62.337 66.667 0.00 0.00 35.63 3.58
286 287 2.028484 GCGTGTCCGAGGTGTGAA 59.972 61.111 0.00 0.00 35.63 3.18
287 288 2.308039 GCGTGTCCGAGGTGTGAAC 61.308 63.158 0.00 0.00 35.63 3.18
288 289 1.663702 CGTGTCCGAGGTGTGAACC 60.664 63.158 0.00 0.00 35.63 3.62
289 290 1.663702 GTGTCCGAGGTGTGAACCG 60.664 63.158 0.00 0.00 34.28 4.44
290 291 2.048503 GTCCGAGGTGTGAACCGG 60.049 66.667 0.00 0.00 43.02 5.28
291 292 2.522436 TCCGAGGTGTGAACCGGT 60.522 61.111 0.00 0.00 42.34 5.28
292 293 2.048503 CCGAGGTGTGAACCGGTC 60.049 66.667 8.04 1.72 37.40 4.79
293 294 2.048503 CGAGGTGTGAACCGGTCC 60.049 66.667 8.04 3.84 34.28 4.46
294 295 2.048503 GAGGTGTGAACCGGTCCG 60.049 66.667 8.04 3.60 34.28 4.79
324 325 2.575993 GCTCGCTCAGCTCCTTCA 59.424 61.111 0.00 0.00 45.83 3.02
325 326 1.143620 GCTCGCTCAGCTCCTTCAT 59.856 57.895 0.00 0.00 45.83 2.57
326 327 0.875474 GCTCGCTCAGCTCCTTCATC 60.875 60.000 0.00 0.00 45.83 2.92
327 328 0.249405 CTCGCTCAGCTCCTTCATCC 60.249 60.000 0.00 0.00 0.00 3.51
328 329 1.227497 CGCTCAGCTCCTTCATCCC 60.227 63.158 0.00 0.00 0.00 3.85
329 330 1.910722 GCTCAGCTCCTTCATCCCA 59.089 57.895 0.00 0.00 0.00 4.37
330 331 0.463474 GCTCAGCTCCTTCATCCCAC 60.463 60.000 0.00 0.00 0.00 4.61
331 332 0.179936 CTCAGCTCCTTCATCCCACC 59.820 60.000 0.00 0.00 0.00 4.61
332 333 0.547471 TCAGCTCCTTCATCCCACCA 60.547 55.000 0.00 0.00 0.00 4.17
333 334 0.393537 CAGCTCCTTCATCCCACCAC 60.394 60.000 0.00 0.00 0.00 4.16
334 335 1.077429 GCTCCTTCATCCCACCACC 60.077 63.158 0.00 0.00 0.00 4.61
335 336 1.221840 CTCCTTCATCCCACCACCG 59.778 63.158 0.00 0.00 0.00 4.94
336 337 1.537889 TCCTTCATCCCACCACCGT 60.538 57.895 0.00 0.00 0.00 4.83
337 338 1.078426 CCTTCATCCCACCACCGTC 60.078 63.158 0.00 0.00 0.00 4.79
338 339 1.078426 CTTCATCCCACCACCGTCC 60.078 63.158 0.00 0.00 0.00 4.79
339 340 1.836999 CTTCATCCCACCACCGTCCA 61.837 60.000 0.00 0.00 0.00 4.02
340 341 2.046314 CATCCCACCACCGTCCAC 60.046 66.667 0.00 0.00 0.00 4.02
341 342 3.327404 ATCCCACCACCGTCCACC 61.327 66.667 0.00 0.00 0.00 4.61
363 364 3.450115 GACCCGACCAGACCCGAG 61.450 72.222 0.00 0.00 0.00 4.63
367 368 4.180946 CGACCAGACCCGAGCGAG 62.181 72.222 0.00 0.00 0.00 5.03
368 369 4.500116 GACCAGACCCGAGCGAGC 62.500 72.222 0.00 0.00 0.00 5.03
371 372 4.544689 CAGACCCGAGCGAGCGAG 62.545 72.222 0.00 0.00 0.00 5.03
372 373 4.779966 AGACCCGAGCGAGCGAGA 62.780 66.667 0.00 0.00 0.00 4.04
373 374 4.539881 GACCCGAGCGAGCGAGAC 62.540 72.222 0.00 0.00 0.00 3.36
375 376 4.544689 CCCGAGCGAGCGAGACTG 62.545 72.222 0.00 0.00 0.00 3.51
376 377 3.805307 CCGAGCGAGCGAGACTGT 61.805 66.667 0.00 0.00 0.00 3.55
377 378 2.575525 CGAGCGAGCGAGACTGTG 60.576 66.667 0.00 0.00 0.00 3.66
378 379 2.563942 GAGCGAGCGAGACTGTGT 59.436 61.111 0.00 0.00 0.00 3.72
379 380 1.794864 GAGCGAGCGAGACTGTGTA 59.205 57.895 0.00 0.00 0.00 2.90
380 381 0.521659 GAGCGAGCGAGACTGTGTAC 60.522 60.000 0.00 0.00 0.00 2.90
381 382 1.863880 GCGAGCGAGACTGTGTACG 60.864 63.158 0.00 0.00 0.00 3.67
384 385 2.874780 GCGAGACTGTGTACGCCG 60.875 66.667 3.51 0.00 44.27 6.46
385 386 2.559840 CGAGACTGTGTACGCCGT 59.440 61.111 2.90 2.90 0.00 5.68
386 387 1.511464 CGAGACTGTGTACGCCGTC 60.511 63.158 19.68 19.68 0.00 4.79
387 388 1.577922 GAGACTGTGTACGCCGTCA 59.422 57.895 26.22 0.00 0.00 4.35
388 389 0.728466 GAGACTGTGTACGCCGTCAC 60.728 60.000 26.22 19.05 35.43 3.67
389 390 1.008194 GACTGTGTACGCCGTCACA 60.008 57.895 21.62 17.22 41.37 3.58
390 391 1.273455 GACTGTGTACGCCGTCACAC 61.273 60.000 21.62 16.31 44.26 3.82
391 392 2.353723 TGTGTACGCCGTCACACG 60.354 61.111 15.21 0.00 46.42 4.49
392 393 3.759828 GTGTACGCCGTCACACGC 61.760 66.667 12.68 1.43 40.91 5.34
393 394 4.267503 TGTACGCCGTCACACGCA 62.268 61.111 0.00 0.00 40.91 5.24
394 395 3.759828 GTACGCCGTCACACGCAC 61.760 66.667 0.00 0.00 40.91 5.34
395 396 4.267503 TACGCCGTCACACGCACA 62.268 61.111 0.00 0.00 40.91 4.57
396 397 3.769875 TACGCCGTCACACGCACAA 62.770 57.895 0.00 0.00 40.91 3.33
397 398 4.354212 CGCCGTCACACGCACAAG 62.354 66.667 0.00 0.00 40.91 3.16
398 399 4.666532 GCCGTCACACGCACAAGC 62.667 66.667 0.00 0.00 40.91 4.01
399 400 3.268603 CCGTCACACGCACAAGCA 61.269 61.111 0.00 0.00 40.91 3.91
400 401 2.606961 CCGTCACACGCACAAGCAT 61.607 57.895 0.00 0.00 40.91 3.79
401 402 1.288419 CCGTCACACGCACAAGCATA 61.288 55.000 0.00 0.00 40.91 3.14
402 403 0.510790 CGTCACACGCACAAGCATAA 59.489 50.000 0.00 0.00 42.27 1.90
403 404 1.070242 CGTCACACGCACAAGCATAAA 60.070 47.619 0.00 0.00 42.27 1.40
404 405 2.574322 GTCACACGCACAAGCATAAAG 58.426 47.619 0.00 0.00 42.27 1.85
405 406 2.223144 GTCACACGCACAAGCATAAAGA 59.777 45.455 0.00 0.00 42.27 2.52
406 407 2.875317 TCACACGCACAAGCATAAAGAA 59.125 40.909 0.00 0.00 42.27 2.52
407 408 3.313803 TCACACGCACAAGCATAAAGAAA 59.686 39.130 0.00 0.00 42.27 2.52
408 409 4.041049 CACACGCACAAGCATAAAGAAAA 58.959 39.130 0.00 0.00 42.27 2.29
409 410 4.502282 CACACGCACAAGCATAAAGAAAAA 59.498 37.500 0.00 0.00 42.27 1.94
410 411 4.739716 ACACGCACAAGCATAAAGAAAAAG 59.260 37.500 0.00 0.00 42.27 2.27
411 412 4.975502 CACGCACAAGCATAAAGAAAAAGA 59.024 37.500 0.00 0.00 42.27 2.52
412 413 5.458452 CACGCACAAGCATAAAGAAAAAGAA 59.542 36.000 0.00 0.00 42.27 2.52
413 414 6.019961 CACGCACAAGCATAAAGAAAAAGAAA 60.020 34.615 0.00 0.00 42.27 2.52
414 415 6.533367 ACGCACAAGCATAAAGAAAAAGAAAA 59.467 30.769 0.00 0.00 42.27 2.29
415 416 7.064016 ACGCACAAGCATAAAGAAAAAGAAAAA 59.936 29.630 0.00 0.00 42.27 1.94
416 417 7.580165 CGCACAAGCATAAAGAAAAAGAAAAAG 59.420 33.333 0.00 0.00 42.27 2.27
417 418 7.852454 GCACAAGCATAAAGAAAAAGAAAAAGG 59.148 33.333 0.00 0.00 41.58 3.11
418 419 9.097257 CACAAGCATAAAGAAAAAGAAAAAGGA 57.903 29.630 0.00 0.00 0.00 3.36
419 420 9.665719 ACAAGCATAAAGAAAAAGAAAAAGGAA 57.334 25.926 0.00 0.00 0.00 3.36
427 428 7.849804 AGAAAAAGAAAAAGGAAAAGAAGCC 57.150 32.000 0.00 0.00 0.00 4.35
428 429 6.823689 AGAAAAAGAAAAAGGAAAAGAAGCCC 59.176 34.615 0.00 0.00 0.00 5.19
429 430 4.322080 AAGAAAAAGGAAAAGAAGCCCG 57.678 40.909 0.00 0.00 0.00 6.13
430 431 2.628178 AGAAAAAGGAAAAGAAGCCCGG 59.372 45.455 0.00 0.00 0.00 5.73
431 432 0.679505 AAAAGGAAAAGAAGCCCGGC 59.320 50.000 0.00 0.00 0.00 6.13
432 433 1.185618 AAAGGAAAAGAAGCCCGGCC 61.186 55.000 5.55 0.00 0.00 6.13
433 434 3.068691 GGAAAAGAAGCCCGGCCC 61.069 66.667 5.55 0.00 0.00 5.80
434 435 2.282887 GAAAAGAAGCCCGGCCCA 60.283 61.111 5.55 0.00 0.00 5.36
435 436 1.682344 GAAAAGAAGCCCGGCCCAT 60.682 57.895 5.55 0.00 0.00 4.00
436 437 1.667154 GAAAAGAAGCCCGGCCCATC 61.667 60.000 5.55 2.40 0.00 3.51
437 438 3.995506 AAAGAAGCCCGGCCCATCG 62.996 63.158 5.55 0.00 0.00 3.84
460 461 3.834799 GACGACCCGGCCCTGTAG 61.835 72.222 0.00 0.00 0.00 2.74
461 462 4.691359 ACGACCCGGCCCTGTAGT 62.691 66.667 0.00 0.00 0.00 2.73
462 463 4.143333 CGACCCGGCCCTGTAGTG 62.143 72.222 0.00 0.00 0.00 2.74
463 464 3.782443 GACCCGGCCCTGTAGTGG 61.782 72.222 0.00 0.00 0.00 4.00
464 465 4.326227 ACCCGGCCCTGTAGTGGA 62.326 66.667 0.00 0.00 0.00 4.02
465 466 3.782443 CCCGGCCCTGTAGTGGAC 61.782 72.222 0.00 0.00 0.00 4.02
466 467 2.683933 CCGGCCCTGTAGTGGACT 60.684 66.667 0.00 0.00 0.00 3.85
467 468 2.579201 CGGCCCTGTAGTGGACTG 59.421 66.667 0.00 0.00 0.00 3.51
468 469 2.990479 GGCCCTGTAGTGGACTGG 59.010 66.667 0.00 0.00 44.77 4.00
473 474 2.957060 CTGTAGTGGACTGGACGGA 58.043 57.895 0.00 0.00 0.00 4.69
474 475 0.811915 CTGTAGTGGACTGGACGGAG 59.188 60.000 0.00 0.00 0.00 4.63
475 476 0.611062 TGTAGTGGACTGGACGGAGG 60.611 60.000 0.00 0.00 0.00 4.30
476 477 0.323178 GTAGTGGACTGGACGGAGGA 60.323 60.000 0.00 0.00 0.00 3.71
477 478 0.406750 TAGTGGACTGGACGGAGGAA 59.593 55.000 0.00 0.00 0.00 3.36
547 548 4.261572 CGTGAGAGAGAGATCAGAAATCCC 60.262 50.000 0.00 0.00 0.00 3.85
548 549 4.039124 GTGAGAGAGAGATCAGAAATCCCC 59.961 50.000 0.00 0.00 0.00 4.81
549 550 4.222336 GAGAGAGAGATCAGAAATCCCCA 58.778 47.826 0.00 0.00 0.00 4.96
550 551 3.966665 AGAGAGAGATCAGAAATCCCCAC 59.033 47.826 0.00 0.00 0.00 4.61
551 552 3.044894 AGAGAGATCAGAAATCCCCACC 58.955 50.000 0.00 0.00 0.00 4.61
567 568 1.042559 CACCCCAATTCCCCAATCCG 61.043 60.000 0.00 0.00 0.00 4.18
574 575 0.623324 ATTCCCCAATCCGTCCTCCA 60.623 55.000 0.00 0.00 0.00 3.86
575 576 1.559065 TTCCCCAATCCGTCCTCCAC 61.559 60.000 0.00 0.00 0.00 4.02
578 579 2.590092 CAATCCGTCCTCCACCCC 59.410 66.667 0.00 0.00 0.00 4.95
579 580 2.124085 AATCCGTCCTCCACCCCA 59.876 61.111 0.00 0.00 0.00 4.96
580 581 1.307866 AATCCGTCCTCCACCCCAT 60.308 57.895 0.00 0.00 0.00 4.00
581 582 1.345715 AATCCGTCCTCCACCCCATC 61.346 60.000 0.00 0.00 0.00 3.51
582 583 3.849951 CCGTCCTCCACCCCATCG 61.850 72.222 0.00 0.00 0.00 3.84
583 584 3.075005 CGTCCTCCACCCCATCGT 61.075 66.667 0.00 0.00 0.00 3.73
585 586 2.365105 TCCTCCACCCCATCGTCC 60.365 66.667 0.00 0.00 0.00 4.79
586 587 3.480133 CCTCCACCCCATCGTCCC 61.480 72.222 0.00 0.00 0.00 4.46
587 588 3.480133 CTCCACCCCATCGTCCCC 61.480 72.222 0.00 0.00 0.00 4.81
588 589 4.340489 TCCACCCCATCGTCCCCA 62.340 66.667 0.00 0.00 0.00 4.96
589 590 3.797353 CCACCCCATCGTCCCCAG 61.797 72.222 0.00 0.00 0.00 4.45
611 2659 3.589988 CAGTATATCAATGGCTCCCGTC 58.410 50.000 0.00 0.00 0.00 4.79
637 2685 1.215173 GTGATCCCCATCCACCAATCA 59.785 52.381 0.00 0.00 0.00 2.57
649 2697 4.238669 TCCACCAATCAAAATTCCCCTTT 58.761 39.130 0.00 0.00 0.00 3.11
650 2698 4.041444 TCCACCAATCAAAATTCCCCTTTG 59.959 41.667 0.00 0.00 35.51 2.77
653 2701 4.004982 CCAATCAAAATTCCCCTTTGCTG 58.995 43.478 0.00 0.00 34.43 4.41
654 2702 2.837532 TCAAAATTCCCCTTTGCTGC 57.162 45.000 0.00 0.00 34.43 5.25
655 2703 2.328319 TCAAAATTCCCCTTTGCTGCT 58.672 42.857 0.00 0.00 34.43 4.24
682 2732 2.269241 GCTTGTCCCCTTCCTCCG 59.731 66.667 0.00 0.00 0.00 4.63
706 2760 2.098233 CCGTCCGTCCGTCCAATTG 61.098 63.158 0.00 0.00 0.00 2.32
743 2797 4.032653 GCTGGACTCTGCCTCTCT 57.967 61.111 0.00 0.00 32.58 3.10
744 2798 1.516892 GCTGGACTCTGCCTCTCTG 59.483 63.158 0.00 0.00 32.58 3.35
745 2799 1.516892 CTGGACTCTGCCTCTCTGC 59.483 63.158 0.00 0.00 0.00 4.26
746 2800 0.971959 CTGGACTCTGCCTCTCTGCT 60.972 60.000 0.00 0.00 0.00 4.24
747 2801 1.256361 TGGACTCTGCCTCTCTGCTG 61.256 60.000 0.00 0.00 0.00 4.41
748 2802 1.153588 GACTCTGCCTCTCTGCTGC 60.154 63.158 0.00 0.00 0.00 5.25
759 2813 4.021192 GCCTCTCTGCTGCTAAATCTATCT 60.021 45.833 0.00 0.00 0.00 1.98
761 2815 5.336690 CCTCTCTGCTGCTAAATCTATCTCC 60.337 48.000 0.00 0.00 0.00 3.71
763 2817 3.256879 TCTGCTGCTAAATCTATCTCCCG 59.743 47.826 0.00 0.00 0.00 5.14
764 2818 3.230976 TGCTGCTAAATCTATCTCCCGA 58.769 45.455 0.00 0.00 0.00 5.14
770 2841 0.178958 AATCTATCTCCCGACGGCCT 60.179 55.000 8.86 0.00 0.00 5.19
787 2858 4.189580 TGGCCTTATCCCCAGCGC 62.190 66.667 3.32 0.00 0.00 5.92
790 2861 4.545706 CCTTATCCCCAGCGCGCA 62.546 66.667 35.10 13.06 0.00 6.09
791 2862 3.272334 CTTATCCCCAGCGCGCAC 61.272 66.667 35.10 4.34 0.00 5.34
792 2863 4.849310 TTATCCCCAGCGCGCACC 62.849 66.667 35.10 3.43 0.00 5.01
837 2908 2.045926 GCCACACATTCCTCGCCT 60.046 61.111 0.00 0.00 0.00 5.52
873 2944 0.615850 CCACAACCCTCTCTTCTCCC 59.384 60.000 0.00 0.00 0.00 4.30
878 2949 1.074850 CCCTCTCTTCTCCCCTCCC 60.075 68.421 0.00 0.00 0.00 4.30
880 2951 1.706575 CTCTCTTCTCCCCTCCCCA 59.293 63.158 0.00 0.00 0.00 4.96
881 2952 0.689412 CTCTCTTCTCCCCTCCCCAC 60.689 65.000 0.00 0.00 0.00 4.61
882 2953 1.690985 CTCTTCTCCCCTCCCCACC 60.691 68.421 0.00 0.00 0.00 4.61
883 2954 2.692741 CTTCTCCCCTCCCCACCC 60.693 72.222 0.00 0.00 0.00 4.61
884 2955 4.364686 TTCTCCCCTCCCCACCCC 62.365 72.222 0.00 0.00 0.00 4.95
944 3015 3.201297 CTGTGTGTGGTGTGCGCA 61.201 61.111 5.66 5.66 0.00 6.09
959 3030 4.500568 GCAGCGCGCGGTTTCTAC 62.501 66.667 34.08 15.39 0.00 2.59
965 3036 1.881709 GCGCGGTTTCTACTAGGCC 60.882 63.158 8.83 0.00 0.00 5.19
967 3038 1.673808 CGCGGTTTCTACTAGGCCCT 61.674 60.000 0.00 0.00 0.00 5.19
1015 3086 3.883744 CTCTCCACGCACCACCCAC 62.884 68.421 0.00 0.00 0.00 4.61
1016 3087 4.248842 CTCCACGCACCACCCACA 62.249 66.667 0.00 0.00 0.00 4.17
1017 3088 3.765894 CTCCACGCACCACCCACAA 62.766 63.158 0.00 0.00 0.00 3.33
1018 3089 2.830827 CCACGCACCACCCACAAA 60.831 61.111 0.00 0.00 0.00 2.83
1019 3090 2.721231 CACGCACCACCCACAAAG 59.279 61.111 0.00 0.00 0.00 2.77
1020 3091 2.518349 ACGCACCACCCACAAAGG 60.518 61.111 0.00 0.00 37.03 3.11
1021 3092 2.518349 CGCACCACCCACAAAGGT 60.518 61.111 0.00 0.00 42.40 3.50
1022 3093 2.124693 CGCACCACCCACAAAGGTT 61.125 57.895 0.00 0.00 38.39 3.50
1023 3094 1.671901 CGCACCACCCACAAAGGTTT 61.672 55.000 0.00 0.00 38.39 3.27
1024 3095 0.104120 GCACCACCCACAAAGGTTTC 59.896 55.000 0.00 0.00 38.39 2.78
1025 3096 1.775385 CACCACCCACAAAGGTTTCT 58.225 50.000 0.00 0.00 38.39 2.52
1026 3097 2.107366 CACCACCCACAAAGGTTTCTT 58.893 47.619 0.00 0.00 38.39 2.52
1027 3098 2.100749 CACCACCCACAAAGGTTTCTTC 59.899 50.000 0.00 0.00 38.39 2.87
1028 3099 2.024369 ACCACCCACAAAGGTTTCTTCT 60.024 45.455 0.00 0.00 38.39 2.85
1029 3100 3.031013 CCACCCACAAAGGTTTCTTCTT 58.969 45.455 0.00 0.00 38.39 2.52
1030 3101 3.068165 CCACCCACAAAGGTTTCTTCTTC 59.932 47.826 0.00 0.00 38.39 2.87
1031 3102 3.954258 CACCCACAAAGGTTTCTTCTTCT 59.046 43.478 0.00 0.00 38.39 2.85
1032 3103 4.402474 CACCCACAAAGGTTTCTTCTTCTT 59.598 41.667 0.00 0.00 38.39 2.52
1033 3104 4.645136 ACCCACAAAGGTTTCTTCTTCTTC 59.355 41.667 0.00 0.00 36.44 2.87
1034 3105 4.889995 CCCACAAAGGTTTCTTCTTCTTCT 59.110 41.667 0.00 0.00 34.66 2.85
1035 3106 5.360999 CCCACAAAGGTTTCTTCTTCTTCTT 59.639 40.000 0.00 0.00 34.66 2.52
1036 3107 6.460261 CCCACAAAGGTTTCTTCTTCTTCTTC 60.460 42.308 0.00 0.00 34.66 2.87
1037 3108 6.319911 CCACAAAGGTTTCTTCTTCTTCTTCT 59.680 38.462 0.00 0.00 31.82 2.85
1038 3109 7.148000 CCACAAAGGTTTCTTCTTCTTCTTCTT 60.148 37.037 0.00 0.00 31.82 2.52
1039 3110 7.912773 CACAAAGGTTTCTTCTTCTTCTTCTTC 59.087 37.037 0.00 0.00 31.82 2.87
1040 3111 7.831690 ACAAAGGTTTCTTCTTCTTCTTCTTCT 59.168 33.333 0.00 0.00 31.82 2.85
1041 3112 7.800155 AAGGTTTCTTCTTCTTCTTCTTCTG 57.200 36.000 0.00 0.00 0.00 3.02
1042 3113 6.295249 AGGTTTCTTCTTCTTCTTCTTCTGG 58.705 40.000 0.00 0.00 0.00 3.86
1043 3114 6.058833 GGTTTCTTCTTCTTCTTCTTCTGGT 58.941 40.000 0.00 0.00 0.00 4.00
1044 3115 6.017523 GGTTTCTTCTTCTTCTTCTTCTGGTG 60.018 42.308 0.00 0.00 0.00 4.17
1045 3116 4.636249 TCTTCTTCTTCTTCTTCTGGTGC 58.364 43.478 0.00 0.00 0.00 5.01
1046 3117 3.032017 TCTTCTTCTTCTTCTGGTGCG 57.968 47.619 0.00 0.00 0.00 5.34
1047 3118 1.462670 CTTCTTCTTCTTCTGGTGCGC 59.537 52.381 0.00 0.00 0.00 6.09
1048 3119 0.320771 TCTTCTTCTTCTGGTGCGCC 60.321 55.000 10.11 10.11 0.00 6.53
1049 3120 1.301677 CTTCTTCTTCTGGTGCGCCC 61.302 60.000 15.15 6.44 0.00 6.13
1050 3121 3.121030 CTTCTTCTGGTGCGCCCG 61.121 66.667 15.15 7.79 35.15 6.13
1051 3122 3.883744 CTTCTTCTGGTGCGCCCGT 62.884 63.158 15.15 0.00 35.15 5.28
1052 3123 3.876589 TTCTTCTGGTGCGCCCGTC 62.877 63.158 15.15 0.00 35.15 4.79
1069 3140 4.247612 CCGTCCGTCCGTCCGATC 62.248 72.222 0.00 0.00 0.00 3.69
1072 3143 3.136123 TCCGTCCGTCCGATCCAC 61.136 66.667 0.00 0.00 0.00 4.02
1075 3146 2.967397 GTCCGTCCGATCCACACA 59.033 61.111 0.00 0.00 0.00 3.72
1077 3148 2.125673 CCGTCCGATCCACACACC 60.126 66.667 0.00 0.00 0.00 4.16
1078 3149 2.125673 CGTCCGATCCACACACCC 60.126 66.667 0.00 0.00 0.00 4.61
1079 3150 2.938086 CGTCCGATCCACACACCCA 61.938 63.158 0.00 0.00 0.00 4.51
1080 3151 1.079127 GTCCGATCCACACACCCAG 60.079 63.158 0.00 0.00 0.00 4.45
1083 3154 1.446099 CGATCCACACACCCAGACG 60.446 63.158 0.00 0.00 0.00 4.18
1084 3155 1.671742 GATCCACACACCCAGACGT 59.328 57.895 0.00 0.00 0.00 4.34
1086 3157 0.832135 ATCCACACACCCAGACGTCT 60.832 55.000 13.58 13.58 0.00 4.18
1087 3158 1.006102 CCACACACCCAGACGTCTC 60.006 63.158 16.96 0.00 0.00 3.36
1088 3159 1.006102 CACACACCCAGACGTCTCC 60.006 63.158 16.96 0.00 0.00 3.71
1089 3160 1.152525 ACACACCCAGACGTCTCCT 60.153 57.895 16.96 0.00 0.00 3.69
1090 3161 0.759436 ACACACCCAGACGTCTCCTT 60.759 55.000 16.96 0.00 0.00 3.36
1093 3164 0.528470 CACCCAGACGTCTCCTTCTC 59.472 60.000 16.96 0.00 0.00 2.87
1096 3167 0.323908 CCAGACGTCTCCTTCTCCCT 60.324 60.000 16.96 0.00 0.00 4.20
1097 3168 1.099689 CAGACGTCTCCTTCTCCCTC 58.900 60.000 16.96 0.00 0.00 4.30
1099 3170 1.000612 ACGTCTCCTTCTCCCTCCC 59.999 63.158 0.00 0.00 0.00 4.30
1100 3171 1.308326 CGTCTCCTTCTCCCTCCCT 59.692 63.158 0.00 0.00 0.00 4.20
1101 3172 1.040339 CGTCTCCTTCTCCCTCCCTG 61.040 65.000 0.00 0.00 0.00 4.45
1103 3174 1.002792 CTCCTTCTCCCTCCCTGCT 59.997 63.158 0.00 0.00 0.00 4.24
1104 3175 1.002274 TCCTTCTCCCTCCCTGCTC 59.998 63.158 0.00 0.00 0.00 4.26
1105 3176 1.002792 CCTTCTCCCTCCCTGCTCT 59.997 63.158 0.00 0.00 0.00 4.09
1106 3177 0.620121 CCTTCTCCCTCCCTGCTCTT 60.620 60.000 0.00 0.00 0.00 2.85
1107 3178 0.829990 CTTCTCCCTCCCTGCTCTTC 59.170 60.000 0.00 0.00 0.00 2.87
1108 3179 0.117140 TTCTCCCTCCCTGCTCTTCA 59.883 55.000 0.00 0.00 0.00 3.02
1109 3180 0.117140 TCTCCCTCCCTGCTCTTCAA 59.883 55.000 0.00 0.00 0.00 2.69
1111 3182 0.911525 TCCCTCCCTGCTCTTCAAGG 60.912 60.000 0.00 0.00 0.00 3.61
1112 3183 1.077858 CCTCCCTGCTCTTCAAGGC 60.078 63.158 0.00 0.00 0.00 4.35
1113 3184 1.560866 CCTCCCTGCTCTTCAAGGCT 61.561 60.000 0.41 0.00 0.00 4.58
1114 3185 0.107752 CTCCCTGCTCTTCAAGGCTC 60.108 60.000 0.00 0.00 0.00 4.70
1115 3186 0.546267 TCCCTGCTCTTCAAGGCTCT 60.546 55.000 0.00 0.00 0.00 4.09
1116 3187 1.198713 CCCTGCTCTTCAAGGCTCTA 58.801 55.000 0.00 0.00 0.00 2.43
1117 3188 1.767681 CCCTGCTCTTCAAGGCTCTAT 59.232 52.381 0.00 0.00 0.00 1.98
1118 3189 2.224257 CCCTGCTCTTCAAGGCTCTATC 60.224 54.545 0.00 0.00 0.00 2.08
1120 3191 3.134442 CCTGCTCTTCAAGGCTCTATCTT 59.866 47.826 0.00 0.00 0.00 2.40
1121 3192 4.121317 CTGCTCTTCAAGGCTCTATCTTG 58.879 47.826 0.00 0.00 41.99 3.02
1122 3193 2.871633 GCTCTTCAAGGCTCTATCTTGC 59.128 50.000 0.00 0.00 40.82 4.01
1124 3195 2.159043 TCTTCAAGGCTCTATCTTGCGG 60.159 50.000 0.00 0.00 40.82 5.69
1125 3196 1.485124 TCAAGGCTCTATCTTGCGGA 58.515 50.000 0.00 0.00 40.82 5.54
1126 3197 1.410517 TCAAGGCTCTATCTTGCGGAG 59.589 52.381 0.00 0.00 40.82 4.63
1127 3198 0.755686 AAGGCTCTATCTTGCGGAGG 59.244 55.000 0.00 0.00 0.00 4.30
1128 3199 0.397816 AGGCTCTATCTTGCGGAGGT 60.398 55.000 0.00 0.00 0.00 3.85
1130 3201 0.249657 GCTCTATCTTGCGGAGGTGG 60.250 60.000 0.00 0.00 0.00 4.61
1131 3202 0.390860 CTCTATCTTGCGGAGGTGGG 59.609 60.000 0.00 0.00 0.00 4.61
1154 3267 2.434884 AAGATGTCGGTGCTGGCG 60.435 61.111 0.00 0.00 0.00 5.69
1170 3283 4.147449 CGGACATGCTGGCGGAGA 62.147 66.667 0.00 0.00 0.00 3.71
1187 3300 3.447025 GATCTTCCGGGAGCCCACG 62.447 68.421 4.24 0.00 35.37 4.94
1379 3495 4.643387 GCCCCGCAGACCACTGTT 62.643 66.667 0.00 0.00 45.04 3.16
1430 3558 6.073003 GGTGAGGAATTACTCTGTGTTTCAAG 60.073 42.308 18.59 0.00 38.32 3.02
1434 3562 8.070769 GAGGAATTACTCTGTGTTTCAAGAAAC 58.929 37.037 10.69 16.60 41.09 2.78
1471 3599 2.833338 CAATTGGATTTGGGGCTTCTGA 59.167 45.455 0.00 0.00 0.00 3.27
1472 3600 2.925966 TTGGATTTGGGGCTTCTGAT 57.074 45.000 0.00 0.00 0.00 2.90
1473 3601 2.925966 TGGATTTGGGGCTTCTGATT 57.074 45.000 0.00 0.00 0.00 2.57
1474 3602 2.459644 TGGATTTGGGGCTTCTGATTG 58.540 47.619 0.00 0.00 0.00 2.67
1475 3603 2.042842 TGGATTTGGGGCTTCTGATTGA 59.957 45.455 0.00 0.00 0.00 2.57
1536 3664 1.528292 ATAGAGCTAAGGCGGCCTCG 61.528 60.000 24.08 17.26 44.37 4.63
1734 3867 3.149196 CCCAGAGCTTTTTAGTTGAGCA 58.851 45.455 0.00 0.00 38.85 4.26
1735 3868 3.190118 CCCAGAGCTTTTTAGTTGAGCAG 59.810 47.826 0.00 0.00 38.85 4.24
1736 3869 3.365767 CCAGAGCTTTTTAGTTGAGCAGC 60.366 47.826 0.00 0.00 38.85 5.25
1737 3870 3.251729 CAGAGCTTTTTAGTTGAGCAGCA 59.748 43.478 0.00 0.00 38.85 4.41
1761 3899 6.635030 ACTGTAGAACCCAAGAATTTTGTC 57.365 37.500 0.00 0.00 0.00 3.18
1765 3903 5.774498 AGAACCCAAGAATTTTGTCTGTC 57.226 39.130 0.00 0.00 0.00 3.51
1766 3904 5.200483 AGAACCCAAGAATTTTGTCTGTCA 58.800 37.500 0.00 0.00 0.00 3.58
1853 3991 8.550376 ACTTGTCAAAATTGTGTCAATTATTGC 58.450 29.630 8.46 0.00 0.00 3.56
1909 4050 8.902540 TGTTGTAGATTTGTGAGATTAGTTGT 57.097 30.769 0.00 0.00 0.00 3.32
1916 4057 7.766278 AGATTTGTGAGATTAGTTGTAGCGAAT 59.234 33.333 0.00 0.00 0.00 3.34
1921 4062 6.252869 GTGAGATTAGTTGTAGCGAATTTCGA 59.747 38.462 22.25 0.00 43.74 3.71
1972 4116 8.170061 AGAAGATACAACTATCCTAGAGCTCAT 58.830 37.037 17.77 2.75 30.40 2.90
1975 4119 7.611467 AGATACAACTATCCTAGAGCTCATGAG 59.389 40.741 18.84 18.84 30.40 2.90
1977 4121 5.896678 ACAACTATCCTAGAGCTCATGAGTT 59.103 40.000 23.38 18.35 0.00 3.01
1988 4135 5.474532 AGAGCTCATGAGTTAAATGTTTGCA 59.525 36.000 23.38 0.00 0.00 4.08
1990 4137 4.622740 GCTCATGAGTTAAATGTTTGCACC 59.377 41.667 23.38 0.00 0.00 5.01
1993 4140 4.846779 TGAGTTAAATGTTTGCACCCTC 57.153 40.909 0.00 0.00 0.00 4.30
2196 4346 1.152030 TGGGTCAGGAAGGTGAGCT 60.152 57.895 0.00 0.00 43.23 4.09
2223 4373 0.689623 GTGATATCCCTCCCTGGCAG 59.310 60.000 7.75 7.75 0.00 4.85
2241 4391 1.039233 AGCCCTTGCGGAATTCATGG 61.039 55.000 7.93 0.00 44.33 3.66
2247 4397 0.246086 TGCGGAATTCATGGCAAACC 59.754 50.000 13.54 0.00 31.50 3.27
2281 4431 0.178992 TACACTGCTTGCCTTGCCTT 60.179 50.000 0.00 0.00 0.00 4.35
2373 4523 2.450609 ACTACTGCGTTACCAAGGTG 57.549 50.000 1.07 0.00 0.00 4.00
2383 4538 3.186409 CGTTACCAAGGTGTGTGATGAAG 59.814 47.826 1.07 0.00 0.00 3.02
2385 4540 2.575532 ACCAAGGTGTGTGATGAAGTG 58.424 47.619 0.00 0.00 0.00 3.16
2421 4578 8.682936 ATATCTGTTAGAAAGCTGTTATTGGG 57.317 34.615 0.00 0.00 0.00 4.12
2485 4654 4.331968 TCCTTTGCGTAATGGATTTGAGT 58.668 39.130 15.41 0.00 35.77 3.41
2557 4741 4.889832 AGATTTATTGCCGCTTTCTCTG 57.110 40.909 0.00 0.00 0.00 3.35
2610 4796 4.327982 TCTATCTGTGCCAAGCATACTC 57.672 45.455 0.00 0.00 41.91 2.59
2611 4797 3.963374 TCTATCTGTGCCAAGCATACTCT 59.037 43.478 0.00 0.00 41.91 3.24
2618 4804 4.006319 GTGCCAAGCATACTCTTCTTTCT 58.994 43.478 0.00 0.00 41.91 2.52
2674 4860 7.185565 AGGCTATCTCTAGTTTAGATGCCATA 58.814 38.462 21.68 0.70 43.10 2.74
2695 4900 6.974622 CCATACATTTAGGCAAAACAGATCAC 59.025 38.462 0.00 0.00 0.00 3.06
2749 4954 8.755696 CAAGTATTGCTTTATTTAGCCAAACA 57.244 30.769 0.00 0.00 40.39 2.83
2750 4955 8.863049 CAAGTATTGCTTTATTTAGCCAAACAG 58.137 33.333 0.00 0.00 40.39 3.16
2751 4956 8.348285 AGTATTGCTTTATTTAGCCAAACAGA 57.652 30.769 0.00 0.00 40.49 3.41
2752 4957 8.971073 AGTATTGCTTTATTTAGCCAAACAGAT 58.029 29.630 0.00 0.00 40.49 2.90
2753 4958 9.237846 GTATTGCTTTATTTAGCCAAACAGATC 57.762 33.333 0.00 0.00 40.49 2.75
2754 4959 6.832520 TGCTTTATTTAGCCAAACAGATCA 57.167 33.333 0.00 0.00 40.49 2.92
2755 4960 7.408756 TGCTTTATTTAGCCAAACAGATCAT 57.591 32.000 0.00 0.00 40.49 2.45
2756 4961 7.839907 TGCTTTATTTAGCCAAACAGATCATT 58.160 30.769 0.00 0.00 40.49 2.57
2757 4962 8.965819 TGCTTTATTTAGCCAAACAGATCATTA 58.034 29.630 0.00 0.00 40.49 1.90
2758 4963 9.801873 GCTTTATTTAGCCAAACAGATCATTAA 57.198 29.630 0.00 0.00 35.06 1.40
2763 4968 9.807649 ATTTAGCCAAACAGATCATTAAATGTC 57.192 29.630 0.00 0.00 0.00 3.06
2764 4969 8.579850 TTAGCCAAACAGATCATTAAATGTCT 57.420 30.769 0.00 0.00 0.00 3.41
2765 4970 7.472334 AGCCAAACAGATCATTAAATGTCTT 57.528 32.000 0.00 0.00 0.00 3.01
2766 4971 7.542025 AGCCAAACAGATCATTAAATGTCTTC 58.458 34.615 0.00 0.00 0.00 2.87
2767 4972 6.753744 GCCAAACAGATCATTAAATGTCTTCC 59.246 38.462 0.00 0.00 0.00 3.46
2768 4973 7.363268 GCCAAACAGATCATTAAATGTCTTCCT 60.363 37.037 0.00 0.00 0.00 3.36
2769 4974 7.972277 CCAAACAGATCATTAAATGTCTTCCTG 59.028 37.037 0.00 0.00 0.00 3.86
2770 4975 6.690194 ACAGATCATTAAATGTCTTCCTGC 57.310 37.500 0.00 0.00 0.00 4.85
2771 4976 6.182627 ACAGATCATTAAATGTCTTCCTGCA 58.817 36.000 0.00 0.00 0.00 4.41
2772 4977 6.832384 ACAGATCATTAAATGTCTTCCTGCAT 59.168 34.615 0.00 0.00 0.00 3.96
2773 4978 7.341256 ACAGATCATTAAATGTCTTCCTGCATT 59.659 33.333 0.00 0.00 36.95 3.56
2774 4979 8.195436 CAGATCATTAAATGTCTTCCTGCATTT 58.805 33.333 0.00 7.50 44.45 2.32
2775 4980 8.755977 AGATCATTAAATGTCTTCCTGCATTTT 58.244 29.630 7.64 0.00 40.98 1.82
2776 4981 9.374838 GATCATTAAATGTCTTCCTGCATTTTT 57.625 29.630 7.64 0.00 40.98 1.94
2777 4982 8.761575 TCATTAAATGTCTTCCTGCATTTTTC 57.238 30.769 7.64 0.00 40.98 2.29
2778 4983 8.587608 TCATTAAATGTCTTCCTGCATTTTTCT 58.412 29.630 7.64 0.00 40.98 2.52
2779 4984 8.866956 CATTAAATGTCTTCCTGCATTTTTCTC 58.133 33.333 7.64 0.00 40.98 2.87
2780 4985 6.409524 AAATGTCTTCCTGCATTTTTCTCA 57.590 33.333 0.00 0.00 40.98 3.27
2781 4986 5.640189 ATGTCTTCCTGCATTTTTCTCAG 57.360 39.130 0.00 0.00 0.00 3.35
2782 4987 4.717877 TGTCTTCCTGCATTTTTCTCAGA 58.282 39.130 0.00 0.00 0.00 3.27
2783 4988 4.758674 TGTCTTCCTGCATTTTTCTCAGAG 59.241 41.667 0.00 0.00 0.00 3.35
2784 4989 4.759183 GTCTTCCTGCATTTTTCTCAGAGT 59.241 41.667 0.00 0.00 0.00 3.24
2787 4992 5.227569 TCCTGCATTTTTCTCAGAGTGTA 57.772 39.130 0.00 0.00 0.00 2.90
2942 5147 4.021544 GCCAATGAATTTACACCTGTTCCA 60.022 41.667 0.00 0.00 0.00 3.53
2978 5183 1.811965 TCAAGAAATGGTGATGGTGCG 59.188 47.619 0.00 0.00 0.00 5.34
3086 5291 1.448893 GGGCTGCGTCAAACGGATA 60.449 57.895 1.33 0.00 42.05 2.59
3254 5459 4.722700 GCCCAAGCCGAGAAGCCA 62.723 66.667 0.00 0.00 0.00 4.75
3323 5528 2.919328 GCCCTGGCTTGCACCTTT 60.919 61.111 0.00 0.00 38.26 3.11
3344 5549 1.073284 GACAAGGGGCTACTGACCAAA 59.927 52.381 0.00 0.00 45.45 3.28
3550 5765 0.035458 AAAGCGTCTGTAAGCAGGCT 59.965 50.000 0.00 0.00 44.69 4.58
3551 5766 0.035458 AAGCGTCTGTAAGCAGGCTT 59.965 50.000 11.70 11.70 44.69 4.35
3708 5932 6.070656 TGAATAAGGCTCATATTTTGGAGGG 58.929 40.000 0.00 0.00 0.00 4.30
3791 6015 1.134431 TCGCTGGTGACATGTATGCAT 60.134 47.619 3.79 3.79 41.51 3.96
3910 6138 7.970061 TGTCAATCTTCAACTTTCTTGTTTCAG 59.030 33.333 0.00 0.00 0.00 3.02
3917 6145 6.112734 TCAACTTTCTTGTTTCAGACTAGCA 58.887 36.000 0.00 0.00 32.12 3.49
3956 6184 6.938030 TGTCGGAAAAATGTCATACTTAGGTT 59.062 34.615 0.00 0.00 0.00 3.50
3967 6195 6.837048 TGTCATACTTAGGTTAGGTGATGCTA 59.163 38.462 0.00 0.00 0.00 3.49
4126 6776 0.601046 CGCATCATATGTGGTCGCCT 60.601 55.000 1.90 0.00 37.14 5.52
4179 6829 3.040147 TCTCCAAATGTTGACGACTCC 57.960 47.619 0.00 0.00 0.00 3.85
4251 6901 8.729756 CATAACACATGTTAAATGACTCCTTCA 58.270 33.333 8.47 0.00 42.93 3.02
4272 6922 5.620206 TCAGGCAGACTAAAATGTTCTTCA 58.380 37.500 0.00 0.00 0.00 3.02
4338 6988 6.413783 ACGAAACCCAGGAAAAATTACATT 57.586 33.333 0.00 0.00 0.00 2.71
4341 6992 6.517529 CGAAACCCAGGAAAAATTACATTCCA 60.518 38.462 15.86 0.00 46.14 3.53
4379 7030 4.340617 TGGCAAACCTATTTACAAGAGGG 58.659 43.478 2.37 0.00 36.63 4.30
4482 7148 5.867903 AACATTCTCCAAAAACATCACCA 57.132 34.783 0.00 0.00 0.00 4.17
4527 7193 5.560724 TGTGACCAAGATAAAGGAAAGAGG 58.439 41.667 0.00 0.00 0.00 3.69
4549 7215 3.117046 GAGAGAATAGTACTTGCCGTGC 58.883 50.000 0.00 0.00 0.00 5.34
4706 7377 5.163683 CCCTCACTCACAAATCAATGCTAAG 60.164 44.000 0.00 0.00 0.00 2.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.387565 TGTACAGACACAAGCGCTCA 59.612 50.000 12.06 0.00 0.00 4.26
1 2 1.063806 CTGTACAGACACAAGCGCTC 58.936 55.000 18.45 0.00 0.00 5.03
2 3 0.673985 TCTGTACAGACACAAGCGCT 59.326 50.000 21.74 2.64 31.41 5.92
3 4 1.391485 CATCTGTACAGACACAAGCGC 59.609 52.381 27.41 0.00 40.75 5.92
4 5 2.677199 ACATCTGTACAGACACAAGCG 58.323 47.619 27.41 12.03 40.75 4.68
5 6 6.539649 TTTAACATCTGTACAGACACAAGC 57.460 37.500 27.41 0.00 40.75 4.01
29 30 4.219725 CCATAACAATCCCGTCACCTTTTT 59.780 41.667 0.00 0.00 0.00 1.94
30 31 3.761752 CCATAACAATCCCGTCACCTTTT 59.238 43.478 0.00 0.00 0.00 2.27
31 32 3.352648 CCATAACAATCCCGTCACCTTT 58.647 45.455 0.00 0.00 0.00 3.11
32 33 2.356741 CCCATAACAATCCCGTCACCTT 60.357 50.000 0.00 0.00 0.00 3.50
33 34 1.211949 CCCATAACAATCCCGTCACCT 59.788 52.381 0.00 0.00 0.00 4.00
34 35 1.675552 CCCATAACAATCCCGTCACC 58.324 55.000 0.00 0.00 0.00 4.02
35 36 1.021968 GCCCATAACAATCCCGTCAC 58.978 55.000 0.00 0.00 0.00 3.67
36 37 0.462937 CGCCCATAACAATCCCGTCA 60.463 55.000 0.00 0.00 0.00 4.35
37 38 1.164041 CCGCCCATAACAATCCCGTC 61.164 60.000 0.00 0.00 0.00 4.79
38 39 1.153046 CCGCCCATAACAATCCCGT 60.153 57.895 0.00 0.00 0.00 5.28
39 40 2.551912 GCCGCCCATAACAATCCCG 61.552 63.158 0.00 0.00 0.00 5.14
40 41 1.454847 TGCCGCCCATAACAATCCC 60.455 57.895 0.00 0.00 0.00 3.85
41 42 1.455383 CCTGCCGCCCATAACAATCC 61.455 60.000 0.00 0.00 0.00 3.01
42 43 0.751643 ACCTGCCGCCCATAACAATC 60.752 55.000 0.00 0.00 0.00 2.67
43 44 0.751643 GACCTGCCGCCCATAACAAT 60.752 55.000 0.00 0.00 0.00 2.71
44 45 1.377987 GACCTGCCGCCCATAACAA 60.378 57.895 0.00 0.00 0.00 2.83
45 46 2.270850 GACCTGCCGCCCATAACA 59.729 61.111 0.00 0.00 0.00 2.41
46 47 2.300850 TACGACCTGCCGCCCATAAC 62.301 60.000 0.00 0.00 0.00 1.89
47 48 2.023414 CTACGACCTGCCGCCCATAA 62.023 60.000 0.00 0.00 0.00 1.90
48 49 2.442458 TACGACCTGCCGCCCATA 60.442 61.111 0.00 0.00 0.00 2.74
49 50 3.849951 CTACGACCTGCCGCCCAT 61.850 66.667 0.00 0.00 0.00 4.00
52 53 2.713967 TAACCTACGACCTGCCGCC 61.714 63.158 0.00 0.00 0.00 6.13
53 54 1.517913 GTAACCTACGACCTGCCGC 60.518 63.158 0.00 0.00 0.00 6.53
54 55 0.179145 CAGTAACCTACGACCTGCCG 60.179 60.000 0.00 0.00 0.00 5.69
55 56 0.893447 ACAGTAACCTACGACCTGCC 59.107 55.000 0.00 0.00 0.00 4.85
56 57 2.735134 CAAACAGTAACCTACGACCTGC 59.265 50.000 0.00 0.00 0.00 4.85
57 58 4.247267 TCAAACAGTAACCTACGACCTG 57.753 45.455 0.00 0.00 0.00 4.00
58 59 5.011329 TCAATCAAACAGTAACCTACGACCT 59.989 40.000 0.00 0.00 0.00 3.85
59 60 5.232463 TCAATCAAACAGTAACCTACGACC 58.768 41.667 0.00 0.00 0.00 4.79
60 61 6.183360 CCATCAATCAAACAGTAACCTACGAC 60.183 42.308 0.00 0.00 0.00 4.34
61 62 5.872617 CCATCAATCAAACAGTAACCTACGA 59.127 40.000 0.00 0.00 0.00 3.43
62 63 5.642063 ACCATCAATCAAACAGTAACCTACG 59.358 40.000 0.00 0.00 0.00 3.51
63 64 7.822822 AGTACCATCAATCAAACAGTAACCTAC 59.177 37.037 0.00 0.00 0.00 3.18
64 65 7.913789 AGTACCATCAATCAAACAGTAACCTA 58.086 34.615 0.00 0.00 0.00 3.08
65 66 6.779860 AGTACCATCAATCAAACAGTAACCT 58.220 36.000 0.00 0.00 0.00 3.50
66 67 7.448748 AAGTACCATCAATCAAACAGTAACC 57.551 36.000 0.00 0.00 0.00 2.85
67 68 9.744468 AAAAAGTACCATCAATCAAACAGTAAC 57.256 29.630 0.00 0.00 0.00 2.50
68 69 9.743057 CAAAAAGTACCATCAATCAAACAGTAA 57.257 29.630 0.00 0.00 0.00 2.24
69 70 7.865385 GCAAAAAGTACCATCAATCAAACAGTA 59.135 33.333 0.00 0.00 0.00 2.74
70 71 6.701400 GCAAAAAGTACCATCAATCAAACAGT 59.299 34.615 0.00 0.00 0.00 3.55
71 72 6.700960 TGCAAAAAGTACCATCAATCAAACAG 59.299 34.615 0.00 0.00 0.00 3.16
72 73 6.577103 TGCAAAAAGTACCATCAATCAAACA 58.423 32.000 0.00 0.00 0.00 2.83
73 74 7.224557 ACTTGCAAAAAGTACCATCAATCAAAC 59.775 33.333 0.00 0.00 0.00 2.93
74 75 7.271511 ACTTGCAAAAAGTACCATCAATCAAA 58.728 30.769 0.00 0.00 0.00 2.69
75 76 6.815089 ACTTGCAAAAAGTACCATCAATCAA 58.185 32.000 0.00 0.00 0.00 2.57
76 77 6.403866 ACTTGCAAAAAGTACCATCAATCA 57.596 33.333 0.00 0.00 0.00 2.57
77 78 7.796958 GTACTTGCAAAAAGTACCATCAATC 57.203 36.000 13.89 0.00 44.07 2.67
86 87 5.846203 ACGTAGGAGTACTTGCAAAAAGTA 58.154 37.500 0.00 0.00 0.00 2.24
87 88 4.700700 ACGTAGGAGTACTTGCAAAAAGT 58.299 39.130 0.00 0.00 0.00 2.66
88 89 5.164119 CGTACGTAGGAGTACTTGCAAAAAG 60.164 44.000 9.66 0.00 43.42 2.27
89 90 4.681025 CGTACGTAGGAGTACTTGCAAAAA 59.319 41.667 9.66 0.00 43.42 1.94
90 91 4.229096 CGTACGTAGGAGTACTTGCAAAA 58.771 43.478 9.66 0.00 43.42 2.44
91 92 3.253188 ACGTACGTAGGAGTACTTGCAAA 59.747 43.478 21.41 0.00 43.42 3.68
92 93 2.813754 ACGTACGTAGGAGTACTTGCAA 59.186 45.455 21.41 0.00 43.42 4.08
93 94 2.160219 CACGTACGTAGGAGTACTTGCA 59.840 50.000 22.34 0.00 43.42 4.08
94 95 2.160417 ACACGTACGTAGGAGTACTTGC 59.840 50.000 22.34 0.00 45.16 4.01
95 96 5.530519 TTACACGTACGTAGGAGTACTTG 57.469 43.478 22.34 7.12 46.06 3.16
96 97 6.743575 ATTTACACGTACGTAGGAGTACTT 57.256 37.500 22.34 10.47 43.42 2.24
97 98 7.265673 TCTATTTACACGTACGTAGGAGTACT 58.734 38.462 22.34 14.40 43.42 2.73
98 99 7.464830 TCTATTTACACGTACGTAGGAGTAC 57.535 40.000 22.34 0.00 42.48 2.73
99 100 7.979537 TCTTCTATTTACACGTACGTAGGAGTA 59.020 37.037 22.34 19.27 0.00 2.59
100 101 6.818644 TCTTCTATTTACACGTACGTAGGAGT 59.181 38.462 22.34 20.25 0.00 3.85
101 102 7.239166 TCTTCTATTTACACGTACGTAGGAG 57.761 40.000 22.34 17.08 0.00 3.69
102 103 7.609760 TTCTTCTATTTACACGTACGTAGGA 57.390 36.000 22.34 9.62 0.00 2.94
103 104 8.177663 TCTTTCTTCTATTTACACGTACGTAGG 58.822 37.037 22.34 12.52 0.00 3.18
104 105 9.546909 TTCTTTCTTCTATTTACACGTACGTAG 57.453 33.333 22.34 17.19 0.00 3.51
105 106 9.891828 TTTCTTTCTTCTATTTACACGTACGTA 57.108 29.630 22.34 5.72 0.00 3.57
106 107 8.801715 TTTCTTTCTTCTATTTACACGTACGT 57.198 30.769 16.72 16.72 0.00 3.57
107 108 8.371053 CCTTTCTTTCTTCTATTTACACGTACG 58.629 37.037 15.01 15.01 0.00 3.67
108 109 9.415544 TCCTTTCTTTCTTCTATTTACACGTAC 57.584 33.333 0.00 0.00 0.00 3.67
109 110 9.635520 CTCCTTTCTTTCTTCTATTTACACGTA 57.364 33.333 0.00 0.00 0.00 3.57
110 111 8.365647 TCTCCTTTCTTTCTTCTATTTACACGT 58.634 33.333 0.00 0.00 0.00 4.49
111 112 8.758633 TCTCCTTTCTTTCTTCTATTTACACG 57.241 34.615 0.00 0.00 0.00 4.49
117 118 9.460019 CCTTTCATCTCCTTTCTTTCTTCTATT 57.540 33.333 0.00 0.00 0.00 1.73
118 119 8.610369 ACCTTTCATCTCCTTTCTTTCTTCTAT 58.390 33.333 0.00 0.00 0.00 1.98
119 120 7.880195 CACCTTTCATCTCCTTTCTTTCTTCTA 59.120 37.037 0.00 0.00 0.00 2.10
120 121 6.714356 CACCTTTCATCTCCTTTCTTTCTTCT 59.286 38.462 0.00 0.00 0.00 2.85
121 122 6.569418 GCACCTTTCATCTCCTTTCTTTCTTC 60.569 42.308 0.00 0.00 0.00 2.87
122 123 5.242615 GCACCTTTCATCTCCTTTCTTTCTT 59.757 40.000 0.00 0.00 0.00 2.52
123 124 4.764308 GCACCTTTCATCTCCTTTCTTTCT 59.236 41.667 0.00 0.00 0.00 2.52
124 125 4.082517 GGCACCTTTCATCTCCTTTCTTTC 60.083 45.833 0.00 0.00 0.00 2.62
125 126 3.829026 GGCACCTTTCATCTCCTTTCTTT 59.171 43.478 0.00 0.00 0.00 2.52
126 127 3.425659 GGCACCTTTCATCTCCTTTCTT 58.574 45.455 0.00 0.00 0.00 2.52
127 128 2.616510 CGGCACCTTTCATCTCCTTTCT 60.617 50.000 0.00 0.00 0.00 2.52
128 129 1.740025 CGGCACCTTTCATCTCCTTTC 59.260 52.381 0.00 0.00 0.00 2.62
129 130 1.826385 CGGCACCTTTCATCTCCTTT 58.174 50.000 0.00 0.00 0.00 3.11
130 131 0.678048 GCGGCACCTTTCATCTCCTT 60.678 55.000 0.00 0.00 0.00 3.36
131 132 1.078143 GCGGCACCTTTCATCTCCT 60.078 57.895 0.00 0.00 0.00 3.69
132 133 0.178068 TAGCGGCACCTTTCATCTCC 59.822 55.000 1.45 0.00 0.00 3.71
133 134 1.291132 GTAGCGGCACCTTTCATCTC 58.709 55.000 1.45 0.00 0.00 2.75
134 135 0.107654 GGTAGCGGCACCTTTCATCT 60.108 55.000 1.45 0.00 35.55 2.90
135 136 1.095807 GGGTAGCGGCACCTTTCATC 61.096 60.000 17.14 1.41 38.73 2.92
136 137 1.077716 GGGTAGCGGCACCTTTCAT 60.078 57.895 17.14 0.00 38.73 2.57
137 138 2.349755 GGGTAGCGGCACCTTTCA 59.650 61.111 17.14 0.00 38.73 2.69
138 139 2.818274 CGGGTAGCGGCACCTTTC 60.818 66.667 17.14 4.69 38.73 2.62
139 140 2.685804 AAACGGGTAGCGGCACCTTT 62.686 55.000 17.14 10.42 38.73 3.11
140 141 2.685804 AAAACGGGTAGCGGCACCTT 62.686 55.000 17.14 6.11 38.73 3.50
141 142 3.186656 AAAACGGGTAGCGGCACCT 62.187 57.895 17.14 1.14 38.73 4.00
142 143 2.670592 AAAACGGGTAGCGGCACC 60.671 61.111 1.45 7.88 37.91 5.01
143 144 2.559330 CAAAACGGGTAGCGGCAC 59.441 61.111 1.45 0.00 0.00 5.01
144 145 2.670251 CCAAAACGGGTAGCGGCA 60.670 61.111 1.45 0.00 0.00 5.69
145 146 2.263021 AACCAAAACGGGTAGCGGC 61.263 57.895 0.00 0.00 41.32 6.53
146 147 0.885596 TCAACCAAAACGGGTAGCGG 60.886 55.000 0.00 0.00 41.32 5.52
147 148 1.161843 ATCAACCAAAACGGGTAGCG 58.838 50.000 0.00 0.00 41.32 4.26
148 149 2.554893 TCAATCAACCAAAACGGGTAGC 59.445 45.455 0.00 0.00 41.32 3.58
149 150 3.057806 GGTCAATCAACCAAAACGGGTAG 60.058 47.826 0.00 0.00 41.32 3.18
150 151 2.885894 GGTCAATCAACCAAAACGGGTA 59.114 45.455 0.00 0.00 41.32 3.69
151 152 1.684450 GGTCAATCAACCAAAACGGGT 59.316 47.619 0.00 0.00 45.04 5.28
152 153 1.000394 GGGTCAATCAACCAAAACGGG 60.000 52.381 0.00 0.00 41.40 5.28
153 154 1.335506 CGGGTCAATCAACCAAAACGG 60.336 52.381 0.00 0.00 41.40 4.44
154 155 1.604755 TCGGGTCAATCAACCAAAACG 59.395 47.619 0.00 0.00 41.40 3.60
155 156 2.287970 GGTCGGGTCAATCAACCAAAAC 60.288 50.000 0.00 0.00 41.40 2.43
156 157 1.957877 GGTCGGGTCAATCAACCAAAA 59.042 47.619 0.00 0.00 41.40 2.44
157 158 1.611519 GGTCGGGTCAATCAACCAAA 58.388 50.000 0.00 0.00 41.40 3.28
158 159 0.250989 GGGTCGGGTCAATCAACCAA 60.251 55.000 0.00 0.00 41.40 3.67
159 160 1.377229 GGGTCGGGTCAATCAACCA 59.623 57.895 0.00 0.00 41.40 3.67
160 161 1.743995 CGGGTCGGGTCAATCAACC 60.744 63.158 0.00 0.00 38.69 3.77
161 162 1.017701 GTCGGGTCGGGTCAATCAAC 61.018 60.000 0.00 0.00 0.00 3.18
162 163 1.294138 GTCGGGTCGGGTCAATCAA 59.706 57.895 0.00 0.00 0.00 2.57
163 164 2.652095 GGTCGGGTCGGGTCAATCA 61.652 63.158 0.00 0.00 0.00 2.57
164 165 2.186125 GGTCGGGTCGGGTCAATC 59.814 66.667 0.00 0.00 0.00 2.67
165 166 3.396570 GGGTCGGGTCGGGTCAAT 61.397 66.667 0.00 0.00 0.00 2.57
182 183 3.701604 GAGTAGCAGCACCGGGTCG 62.702 68.421 6.32 0.00 0.00 4.79
183 184 1.035932 TAGAGTAGCAGCACCGGGTC 61.036 60.000 6.32 0.00 0.00 4.46
184 185 1.000019 TAGAGTAGCAGCACCGGGT 60.000 57.895 6.32 0.00 0.00 5.28
185 186 1.038130 AGTAGAGTAGCAGCACCGGG 61.038 60.000 6.32 0.00 0.00 5.73
186 187 0.382515 GAGTAGAGTAGCAGCACCGG 59.617 60.000 0.00 0.00 0.00 5.28
187 188 0.028242 CGAGTAGAGTAGCAGCACCG 59.972 60.000 0.00 0.00 0.00 4.94
188 189 1.096416 ACGAGTAGAGTAGCAGCACC 58.904 55.000 0.00 0.00 0.00 5.01
189 190 2.923605 AACGAGTAGAGTAGCAGCAC 57.076 50.000 0.00 0.00 0.00 4.40
190 191 3.575630 CAAAACGAGTAGAGTAGCAGCA 58.424 45.455 0.00 0.00 0.00 4.41
191 192 2.924290 CCAAAACGAGTAGAGTAGCAGC 59.076 50.000 0.00 0.00 0.00 5.25
192 193 3.921021 CACCAAAACGAGTAGAGTAGCAG 59.079 47.826 0.00 0.00 0.00 4.24
193 194 3.305813 CCACCAAAACGAGTAGAGTAGCA 60.306 47.826 0.00 0.00 0.00 3.49
194 195 3.251571 CCACCAAAACGAGTAGAGTAGC 58.748 50.000 0.00 0.00 0.00 3.58
195 196 3.368116 CCCCACCAAAACGAGTAGAGTAG 60.368 52.174 0.00 0.00 0.00 2.57
196 197 2.564062 CCCCACCAAAACGAGTAGAGTA 59.436 50.000 0.00 0.00 0.00 2.59
197 198 1.346722 CCCCACCAAAACGAGTAGAGT 59.653 52.381 0.00 0.00 0.00 3.24
198 199 1.944430 GCCCCACCAAAACGAGTAGAG 60.944 57.143 0.00 0.00 0.00 2.43
199 200 0.035739 GCCCCACCAAAACGAGTAGA 59.964 55.000 0.00 0.00 0.00 2.59
200 201 1.296056 CGCCCCACCAAAACGAGTAG 61.296 60.000 0.00 0.00 0.00 2.57
201 202 1.301874 CGCCCCACCAAAACGAGTA 60.302 57.895 0.00 0.00 0.00 2.59
202 203 2.593436 CGCCCCACCAAAACGAGT 60.593 61.111 0.00 0.00 0.00 4.18
203 204 3.361977 CCGCCCCACCAAAACGAG 61.362 66.667 0.00 0.00 0.00 4.18
204 205 3.835790 CTCCGCCCCACCAAAACGA 62.836 63.158 0.00 0.00 0.00 3.85
205 206 3.361977 CTCCGCCCCACCAAAACG 61.362 66.667 0.00 0.00 0.00 3.60
206 207 3.680786 GCTCCGCCCCACCAAAAC 61.681 66.667 0.00 0.00 0.00 2.43
207 208 4.986708 GGCTCCGCCCCACCAAAA 62.987 66.667 0.00 0.00 44.06 2.44
218 219 4.506255 GGAACCCATGGGGCTCCG 62.506 72.222 34.27 8.88 46.57 4.63
224 225 2.438434 GCACGAGGAACCCATGGG 60.438 66.667 30.23 30.23 42.03 4.00
225 226 1.450312 GAGCACGAGGAACCCATGG 60.450 63.158 4.14 4.14 0.00 3.66
226 227 1.450312 GGAGCACGAGGAACCCATG 60.450 63.158 0.00 0.00 0.00 3.66
227 228 2.670148 GGGAGCACGAGGAACCCAT 61.670 63.158 0.00 0.00 40.20 4.00
228 229 3.319198 GGGAGCACGAGGAACCCA 61.319 66.667 0.00 0.00 40.20 4.51
229 230 4.452733 CGGGAGCACGAGGAACCC 62.453 72.222 0.00 0.00 37.42 4.11
230 231 4.452733 CCGGGAGCACGAGGAACC 62.453 72.222 0.00 0.00 35.47 3.62
231 232 4.452733 CCCGGGAGCACGAGGAAC 62.453 72.222 18.48 0.00 35.47 3.62
268 269 3.834447 TTCACACCTCGGACACGCG 62.834 63.158 3.53 3.53 40.69 6.01
269 270 2.028484 TTCACACCTCGGACACGC 59.972 61.111 0.00 0.00 40.69 5.34
270 271 1.663702 GGTTCACACCTCGGACACG 60.664 63.158 0.00 0.00 40.44 4.49
271 272 1.663702 CGGTTCACACCTCGGACAC 60.664 63.158 0.00 0.00 41.64 3.67
272 273 2.732016 CGGTTCACACCTCGGACA 59.268 61.111 0.00 0.00 41.64 4.02
273 274 2.048503 CCGGTTCACACCTCGGAC 60.049 66.667 0.00 0.00 44.69 4.79
274 275 2.522436 ACCGGTTCACACCTCGGA 60.522 61.111 0.00 0.00 44.69 4.55
275 276 2.048503 GACCGGTTCACACCTCGG 60.049 66.667 9.42 0.00 46.95 4.63
276 277 2.048503 GGACCGGTTCACACCTCG 60.049 66.667 9.42 0.00 41.64 4.63
277 278 2.048503 CGGACCGGTTCACACCTC 60.049 66.667 14.76 0.00 41.64 3.85
278 279 3.622826 CCGGACCGGTTCACACCT 61.623 66.667 25.54 0.00 42.73 4.00
308 309 0.249405 GGATGAAGGAGCTGAGCGAG 60.249 60.000 0.00 0.00 0.00 5.03
309 310 1.680522 GGGATGAAGGAGCTGAGCGA 61.681 60.000 0.00 0.00 0.00 4.93
310 311 1.227497 GGGATGAAGGAGCTGAGCG 60.227 63.158 0.00 0.00 0.00 5.03
311 312 0.463474 GTGGGATGAAGGAGCTGAGC 60.463 60.000 0.00 0.00 0.00 4.26
312 313 0.179936 GGTGGGATGAAGGAGCTGAG 59.820 60.000 0.00 0.00 0.00 3.35
313 314 0.547471 TGGTGGGATGAAGGAGCTGA 60.547 55.000 0.00 0.00 0.00 4.26
314 315 0.393537 GTGGTGGGATGAAGGAGCTG 60.394 60.000 0.00 0.00 0.00 4.24
315 316 1.566298 GGTGGTGGGATGAAGGAGCT 61.566 60.000 0.00 0.00 0.00 4.09
316 317 1.077429 GGTGGTGGGATGAAGGAGC 60.077 63.158 0.00 0.00 0.00 4.70
317 318 1.221840 CGGTGGTGGGATGAAGGAG 59.778 63.158 0.00 0.00 0.00 3.69
318 319 1.537889 ACGGTGGTGGGATGAAGGA 60.538 57.895 0.00 0.00 0.00 3.36
319 320 1.078426 GACGGTGGTGGGATGAAGG 60.078 63.158 0.00 0.00 0.00 3.46
320 321 1.078426 GGACGGTGGTGGGATGAAG 60.078 63.158 0.00 0.00 0.00 3.02
321 322 1.843832 TGGACGGTGGTGGGATGAA 60.844 57.895 0.00 0.00 0.00 2.57
322 323 2.203862 TGGACGGTGGTGGGATGA 60.204 61.111 0.00 0.00 0.00 2.92
323 324 2.046314 GTGGACGGTGGTGGGATG 60.046 66.667 0.00 0.00 0.00 3.51
324 325 3.327404 GGTGGACGGTGGTGGGAT 61.327 66.667 0.00 0.00 0.00 3.85
346 347 3.450115 CTCGGGTCTGGTCGGGTC 61.450 72.222 0.00 0.00 0.00 4.46
350 351 4.180946 CTCGCTCGGGTCTGGTCG 62.181 72.222 0.00 0.00 0.00 4.79
351 352 4.500116 GCTCGCTCGGGTCTGGTC 62.500 72.222 0.00 0.00 0.00 4.02
354 355 4.544689 CTCGCTCGCTCGGGTCTG 62.545 72.222 0.00 0.00 0.00 3.51
355 356 4.779966 TCTCGCTCGCTCGGGTCT 62.780 66.667 0.00 0.00 0.00 3.85
356 357 4.539881 GTCTCGCTCGCTCGGGTC 62.540 72.222 0.00 0.00 0.00 4.46
358 359 4.544689 CAGTCTCGCTCGCTCGGG 62.545 72.222 0.00 0.00 0.00 5.14
359 360 3.805307 ACAGTCTCGCTCGCTCGG 61.805 66.667 0.00 0.00 0.00 4.63
360 361 1.967597 TACACAGTCTCGCTCGCTCG 61.968 60.000 0.00 0.00 0.00 5.03
361 362 0.521659 GTACACAGTCTCGCTCGCTC 60.522 60.000 0.00 0.00 0.00 5.03
362 363 1.502640 GTACACAGTCTCGCTCGCT 59.497 57.895 0.00 0.00 0.00 4.93
363 364 1.863880 CGTACACAGTCTCGCTCGC 60.864 63.158 0.00 0.00 0.00 5.03
364 365 1.863880 GCGTACACAGTCTCGCTCG 60.864 63.158 10.64 0.00 44.28 5.03
365 366 1.514443 GGCGTACACAGTCTCGCTC 60.514 63.158 15.11 6.21 46.37 5.03
366 367 2.567049 GGCGTACACAGTCTCGCT 59.433 61.111 15.11 0.00 46.37 4.93
367 368 2.874780 CGGCGTACACAGTCTCGC 60.875 66.667 0.00 9.81 46.42 5.03
368 369 1.511464 GACGGCGTACACAGTCTCG 60.511 63.158 14.74 0.00 0.00 4.04
369 370 0.728466 GTGACGGCGTACACAGTCTC 60.728 60.000 26.29 7.82 37.05 3.36
370 371 1.285023 GTGACGGCGTACACAGTCT 59.715 57.895 26.29 0.00 37.05 3.24
371 372 1.008194 TGTGACGGCGTACACAGTC 60.008 57.895 28.49 12.10 41.19 3.51
372 373 1.299620 GTGTGACGGCGTACACAGT 60.300 57.895 30.96 4.73 45.53 3.55
373 374 2.362047 CGTGTGACGGCGTACACAG 61.362 63.158 30.96 24.11 45.62 3.66
374 375 2.353723 CGTGTGACGGCGTACACA 60.354 61.111 31.72 30.24 45.62 3.72
375 376 3.759828 GCGTGTGACGGCGTACAC 61.760 66.667 27.47 27.47 42.82 2.90
376 377 4.267503 TGCGTGTGACGGCGTACA 62.268 61.111 14.74 14.95 42.82 2.90
377 378 3.759828 GTGCGTGTGACGGCGTAC 61.760 66.667 14.74 12.38 42.82 3.67
378 379 3.769875 TTGTGCGTGTGACGGCGTA 62.770 57.895 14.74 0.00 42.82 4.42
380 381 4.354212 CTTGTGCGTGTGACGGCG 62.354 66.667 4.80 4.80 42.82 6.46
381 382 4.666532 GCTTGTGCGTGTGACGGC 62.667 66.667 0.00 0.00 42.82 5.68
382 383 1.288419 TATGCTTGTGCGTGTGACGG 61.288 55.000 0.00 0.00 42.82 4.79
383 384 0.510790 TTATGCTTGTGCGTGTGACG 59.489 50.000 0.00 0.00 45.88 4.35
384 385 2.223144 TCTTTATGCTTGTGCGTGTGAC 59.777 45.455 0.00 0.00 43.34 3.67
385 386 2.488952 TCTTTATGCTTGTGCGTGTGA 58.511 42.857 0.00 0.00 43.34 3.58
386 387 2.967459 TCTTTATGCTTGTGCGTGTG 57.033 45.000 0.00 0.00 43.34 3.82
387 388 3.980646 TTTCTTTATGCTTGTGCGTGT 57.019 38.095 0.00 0.00 43.34 4.49
388 389 4.975502 TCTTTTTCTTTATGCTTGTGCGTG 59.024 37.500 0.00 0.00 43.34 5.34
389 390 5.181690 TCTTTTTCTTTATGCTTGTGCGT 57.818 34.783 0.00 0.00 43.34 5.24
390 391 6.509317 TTTCTTTTTCTTTATGCTTGTGCG 57.491 33.333 0.00 0.00 43.34 5.34
391 392 7.852454 CCTTTTTCTTTTTCTTTATGCTTGTGC 59.148 33.333 0.00 0.00 40.20 4.57
392 393 9.097257 TCCTTTTTCTTTTTCTTTATGCTTGTG 57.903 29.630 0.00 0.00 0.00 3.33
393 394 9.665719 TTCCTTTTTCTTTTTCTTTATGCTTGT 57.334 25.926 0.00 0.00 0.00 3.16
401 402 8.730680 GGCTTCTTTTCCTTTTTCTTTTTCTTT 58.269 29.630 0.00 0.00 0.00 2.52
402 403 7.336931 GGGCTTCTTTTCCTTTTTCTTTTTCTT 59.663 33.333 0.00 0.00 0.00 2.52
403 404 6.823689 GGGCTTCTTTTCCTTTTTCTTTTTCT 59.176 34.615 0.00 0.00 0.00 2.52
404 405 6.238103 CGGGCTTCTTTTCCTTTTTCTTTTTC 60.238 38.462 0.00 0.00 0.00 2.29
405 406 5.584649 CGGGCTTCTTTTCCTTTTTCTTTTT 59.415 36.000 0.00 0.00 0.00 1.94
406 407 5.116180 CGGGCTTCTTTTCCTTTTTCTTTT 58.884 37.500 0.00 0.00 0.00 2.27
407 408 4.442893 CCGGGCTTCTTTTCCTTTTTCTTT 60.443 41.667 0.00 0.00 0.00 2.52
408 409 3.069586 CCGGGCTTCTTTTCCTTTTTCTT 59.930 43.478 0.00 0.00 0.00 2.52
409 410 2.628178 CCGGGCTTCTTTTCCTTTTTCT 59.372 45.455 0.00 0.00 0.00 2.52
410 411 2.866460 GCCGGGCTTCTTTTCCTTTTTC 60.866 50.000 12.87 0.00 0.00 2.29
411 412 1.070134 GCCGGGCTTCTTTTCCTTTTT 59.930 47.619 12.87 0.00 0.00 1.94
412 413 0.679505 GCCGGGCTTCTTTTCCTTTT 59.320 50.000 12.87 0.00 0.00 2.27
413 414 1.185618 GGCCGGGCTTCTTTTCCTTT 61.186 55.000 22.87 0.00 0.00 3.11
414 415 1.606601 GGCCGGGCTTCTTTTCCTT 60.607 57.895 22.87 0.00 0.00 3.36
415 416 2.035783 GGCCGGGCTTCTTTTCCT 59.964 61.111 22.87 0.00 0.00 3.36
416 417 3.068691 GGGCCGGGCTTCTTTTCC 61.069 66.667 28.80 5.67 0.00 3.13
417 418 1.667154 GATGGGCCGGGCTTCTTTTC 61.667 60.000 28.80 9.71 0.00 2.29
418 419 1.682344 GATGGGCCGGGCTTCTTTT 60.682 57.895 28.80 6.29 0.00 2.27
419 420 2.043953 GATGGGCCGGGCTTCTTT 60.044 61.111 28.80 8.17 0.00 2.52
420 421 4.489771 CGATGGGCCGGGCTTCTT 62.490 66.667 28.80 10.21 0.00 2.52
443 444 3.834799 CTACAGGGCCGGGTCGTC 61.835 72.222 8.94 0.00 0.00 4.20
444 445 4.691359 ACTACAGGGCCGGGTCGT 62.691 66.667 8.94 5.70 0.00 4.34
445 446 4.143333 CACTACAGGGCCGGGTCG 62.143 72.222 8.94 5.04 0.00 4.79
446 447 3.782443 CCACTACAGGGCCGGGTC 61.782 72.222 8.94 0.00 0.00 4.46
447 448 4.326227 TCCACTACAGGGCCGGGT 62.326 66.667 8.94 8.90 0.00 5.28
448 449 3.782443 GTCCACTACAGGGCCGGG 61.782 72.222 8.94 2.25 0.00 5.73
449 450 2.683933 AGTCCACTACAGGGCCGG 60.684 66.667 0.79 0.79 32.23 6.13
450 451 2.579201 CAGTCCACTACAGGGCCG 59.421 66.667 0.00 0.00 32.23 6.13
451 452 1.612442 TCCAGTCCACTACAGGGCC 60.612 63.158 0.00 0.00 35.49 5.80
452 453 1.597461 GTCCAGTCCACTACAGGGC 59.403 63.158 0.00 0.00 35.49 5.19
453 454 1.605058 CCGTCCAGTCCACTACAGGG 61.605 65.000 0.00 0.00 35.49 4.45
454 455 0.611062 TCCGTCCAGTCCACTACAGG 60.611 60.000 0.00 0.00 36.10 4.00
455 456 0.811915 CTCCGTCCAGTCCACTACAG 59.188 60.000 0.00 0.00 0.00 2.74
456 457 0.611062 CCTCCGTCCAGTCCACTACA 60.611 60.000 0.00 0.00 0.00 2.74
457 458 0.323178 TCCTCCGTCCAGTCCACTAC 60.323 60.000 0.00 0.00 0.00 2.73
458 459 0.406750 TTCCTCCGTCCAGTCCACTA 59.593 55.000 0.00 0.00 0.00 2.74
459 460 0.900647 CTTCCTCCGTCCAGTCCACT 60.901 60.000 0.00 0.00 0.00 4.00
460 461 0.898789 TCTTCCTCCGTCCAGTCCAC 60.899 60.000 0.00 0.00 0.00 4.02
461 462 0.178944 TTCTTCCTCCGTCCAGTCCA 60.179 55.000 0.00 0.00 0.00 4.02
462 463 1.137282 GATTCTTCCTCCGTCCAGTCC 59.863 57.143 0.00 0.00 0.00 3.85
463 464 1.137282 GGATTCTTCCTCCGTCCAGTC 59.863 57.143 0.00 0.00 39.14 3.51
464 465 1.196012 GGATTCTTCCTCCGTCCAGT 58.804 55.000 0.00 0.00 39.14 4.00
465 466 1.195115 TGGATTCTTCCTCCGTCCAG 58.805 55.000 0.00 0.00 43.07 3.86
466 467 1.278127 GTTGGATTCTTCCTCCGTCCA 59.722 52.381 0.00 0.00 43.07 4.02
467 468 1.407025 GGTTGGATTCTTCCTCCGTCC 60.407 57.143 0.00 0.00 43.07 4.79
468 469 1.278127 TGGTTGGATTCTTCCTCCGTC 59.722 52.381 0.00 0.00 43.07 4.79
469 470 1.003233 GTGGTTGGATTCTTCCTCCGT 59.997 52.381 0.00 0.00 43.07 4.69
470 471 1.679032 GGTGGTTGGATTCTTCCTCCG 60.679 57.143 0.00 0.00 43.07 4.63
471 472 1.636003 AGGTGGTTGGATTCTTCCTCC 59.364 52.381 0.00 0.00 43.07 4.30
472 473 2.356227 GGAGGTGGTTGGATTCTTCCTC 60.356 54.545 0.00 0.00 43.07 3.71
473 474 1.636003 GGAGGTGGTTGGATTCTTCCT 59.364 52.381 0.00 0.00 43.07 3.36
474 475 1.679032 CGGAGGTGGTTGGATTCTTCC 60.679 57.143 0.00 0.00 42.94 3.46
475 476 1.003233 ACGGAGGTGGTTGGATTCTTC 59.997 52.381 0.00 0.00 0.00 2.87
476 477 1.064825 ACGGAGGTGGTTGGATTCTT 58.935 50.000 0.00 0.00 0.00 2.52
477 478 1.003233 GAACGGAGGTGGTTGGATTCT 59.997 52.381 0.00 0.00 0.00 2.40
518 519 1.380403 ATCTCTCTCTCACGCGGTGG 61.380 60.000 12.47 0.00 33.87 4.61
519 520 0.028770 GATCTCTCTCTCACGCGGTG 59.971 60.000 12.47 6.71 34.45 4.94
520 521 0.393132 TGATCTCTCTCTCACGCGGT 60.393 55.000 12.47 0.00 0.00 5.68
521 522 0.307453 CTGATCTCTCTCTCACGCGG 59.693 60.000 12.47 0.00 0.00 6.46
522 523 1.294857 TCTGATCTCTCTCTCACGCG 58.705 55.000 3.53 3.53 0.00 6.01
523 524 3.773860 TTTCTGATCTCTCTCTCACGC 57.226 47.619 0.00 0.00 0.00 5.34
524 525 4.261572 GGGATTTCTGATCTCTCTCTCACG 60.262 50.000 0.00 0.00 0.00 4.35
525 526 4.039124 GGGGATTTCTGATCTCTCTCTCAC 59.961 50.000 0.00 0.00 0.00 3.51
526 527 4.222336 GGGGATTTCTGATCTCTCTCTCA 58.778 47.826 0.00 0.00 0.00 3.27
527 528 4.039124 GTGGGGATTTCTGATCTCTCTCTC 59.961 50.000 0.00 0.00 0.00 3.20
547 548 0.690744 GGATTGGGGAATTGGGGTGG 60.691 60.000 0.00 0.00 0.00 4.61
548 549 1.042559 CGGATTGGGGAATTGGGGTG 61.043 60.000 0.00 0.00 0.00 4.61
549 550 1.309688 CGGATTGGGGAATTGGGGT 59.690 57.895 0.00 0.00 0.00 4.95
550 551 0.755327 GACGGATTGGGGAATTGGGG 60.755 60.000 0.00 0.00 0.00 4.96
551 552 0.755327 GGACGGATTGGGGAATTGGG 60.755 60.000 0.00 0.00 0.00 4.12
567 568 2.732619 GGACGATGGGGTGGAGGAC 61.733 68.421 0.00 0.00 0.00 3.85
575 576 4.181010 CTGCTGGGGACGATGGGG 62.181 72.222 0.00 0.00 0.00 4.96
578 579 2.562738 TGATATACTGCTGGGGACGATG 59.437 50.000 0.00 0.00 0.00 3.84
579 580 2.889512 TGATATACTGCTGGGGACGAT 58.110 47.619 0.00 0.00 0.00 3.73
580 581 2.375014 TGATATACTGCTGGGGACGA 57.625 50.000 0.00 0.00 0.00 4.20
581 582 3.329386 CATTGATATACTGCTGGGGACG 58.671 50.000 0.00 0.00 0.00 4.79
582 583 3.679389 CCATTGATATACTGCTGGGGAC 58.321 50.000 0.00 0.00 0.00 4.46
583 584 2.040278 GCCATTGATATACTGCTGGGGA 59.960 50.000 0.00 0.00 0.00 4.81
585 586 3.341823 GAGCCATTGATATACTGCTGGG 58.658 50.000 0.00 0.00 0.00 4.45
586 587 3.341823 GGAGCCATTGATATACTGCTGG 58.658 50.000 0.00 0.00 0.00 4.85
587 588 3.341823 GGGAGCCATTGATATACTGCTG 58.658 50.000 0.00 0.00 0.00 4.41
588 589 2.027745 CGGGAGCCATTGATATACTGCT 60.028 50.000 0.00 0.00 0.00 4.24
589 590 2.289694 ACGGGAGCCATTGATATACTGC 60.290 50.000 0.00 0.00 0.00 4.40
624 2672 3.118298 GGGGAATTTTGATTGGTGGATGG 60.118 47.826 0.00 0.00 0.00 3.51
627 2675 3.558608 AGGGGAATTTTGATTGGTGGA 57.441 42.857 0.00 0.00 0.00 4.02
637 2685 1.273327 CGAGCAGCAAAGGGGAATTTT 59.727 47.619 0.00 0.00 0.00 1.82
738 2792 5.336690 GGGAGATAGATTTAGCAGCAGAGAG 60.337 48.000 0.00 0.00 0.00 3.20
739 2793 4.526262 GGGAGATAGATTTAGCAGCAGAGA 59.474 45.833 0.00 0.00 0.00 3.10
740 2794 4.617995 CGGGAGATAGATTTAGCAGCAGAG 60.618 50.000 0.00 0.00 0.00 3.35
741 2795 3.256879 CGGGAGATAGATTTAGCAGCAGA 59.743 47.826 0.00 0.00 0.00 4.26
742 2796 3.256879 TCGGGAGATAGATTTAGCAGCAG 59.743 47.826 0.00 0.00 0.00 4.24
743 2797 3.005897 GTCGGGAGATAGATTTAGCAGCA 59.994 47.826 0.00 0.00 43.27 4.41
744 2798 3.580731 GTCGGGAGATAGATTTAGCAGC 58.419 50.000 0.00 0.00 43.27 5.25
745 2799 3.366476 CCGTCGGGAGATAGATTTAGCAG 60.366 52.174 2.34 0.00 43.27 4.24
746 2800 2.557056 CCGTCGGGAGATAGATTTAGCA 59.443 50.000 2.34 0.00 43.27 3.49
747 2801 2.671632 GCCGTCGGGAGATAGATTTAGC 60.672 54.545 14.38 0.00 43.27 3.09
748 2802 2.094649 GGCCGTCGGGAGATAGATTTAG 60.095 54.545 14.38 0.00 43.27 1.85
770 2841 4.189580 GCGCTGGGGATAAGGCCA 62.190 66.667 5.01 0.00 0.00 5.36
881 2952 3.731766 AATCCAAATCGGGGCGGGG 62.732 63.158 0.00 0.00 34.36 5.73
882 2953 2.123897 AATCCAAATCGGGGCGGG 60.124 61.111 0.00 0.00 34.36 6.13
883 2954 0.751643 AAGAATCCAAATCGGGGCGG 60.752 55.000 0.00 0.00 34.36 6.13
884 2955 0.663153 GAAGAATCCAAATCGGGGCG 59.337 55.000 0.00 0.00 34.36 6.13
885 2956 1.032794 GGAAGAATCCAAATCGGGGC 58.967 55.000 0.00 0.00 45.79 5.80
920 2991 4.935495 ACCACACACAGCAGCGGG 62.935 66.667 0.00 0.00 0.00 6.13
922 2993 2.896854 ACACCACACACAGCAGCG 60.897 61.111 0.00 0.00 0.00 5.18
923 2994 2.717485 CACACCACACACAGCAGC 59.283 61.111 0.00 0.00 0.00 5.25
924 2995 2.717485 GCACACCACACACAGCAG 59.283 61.111 0.00 0.00 0.00 4.24
925 2996 3.201297 CGCACACCACACACAGCA 61.201 61.111 0.00 0.00 0.00 4.41
926 2997 4.612536 GCGCACACCACACACAGC 62.613 66.667 0.30 0.00 0.00 4.40
927 2998 3.172099 CTGCGCACACCACACACAG 62.172 63.158 5.66 0.00 0.00 3.66
928 2999 3.201297 CTGCGCACACCACACACA 61.201 61.111 5.66 0.00 0.00 3.72
929 3000 4.612536 GCTGCGCACACCACACAC 62.613 66.667 5.66 0.00 0.00 3.82
944 3015 1.226603 CTAGTAGAAACCGCGCGCT 60.227 57.895 30.48 18.69 0.00 5.92
991 3062 4.767255 GTGCGTGGAGAGGGCAGG 62.767 72.222 0.00 0.00 37.36 4.85
992 3063 4.767255 GGTGCGTGGAGAGGGCAG 62.767 72.222 0.00 0.00 37.36 4.85
999 3070 3.765894 TTGTGGGTGGTGCGTGGAG 62.766 63.158 0.00 0.00 0.00 3.86
1011 3082 4.889995 AGAAGAAGAAGAAACCTTTGTGGG 59.110 41.667 0.00 0.00 41.11 4.61
1015 3086 8.127954 CAGAAGAAGAAGAAGAAGAAACCTTTG 58.872 37.037 0.00 0.00 0.00 2.77
1016 3087 7.284261 CCAGAAGAAGAAGAAGAAGAAACCTTT 59.716 37.037 0.00 0.00 0.00 3.11
1017 3088 6.770303 CCAGAAGAAGAAGAAGAAGAAACCTT 59.230 38.462 0.00 0.00 0.00 3.50
1018 3089 6.126623 ACCAGAAGAAGAAGAAGAAGAAACCT 60.127 38.462 0.00 0.00 0.00 3.50
1019 3090 6.017523 CACCAGAAGAAGAAGAAGAAGAAACC 60.018 42.308 0.00 0.00 0.00 3.27
1020 3091 6.512578 GCACCAGAAGAAGAAGAAGAAGAAAC 60.513 42.308 0.00 0.00 0.00 2.78
1021 3092 5.529060 GCACCAGAAGAAGAAGAAGAAGAAA 59.471 40.000 0.00 0.00 0.00 2.52
1022 3093 5.059833 GCACCAGAAGAAGAAGAAGAAGAA 58.940 41.667 0.00 0.00 0.00 2.52
1023 3094 4.636249 GCACCAGAAGAAGAAGAAGAAGA 58.364 43.478 0.00 0.00 0.00 2.87
1024 3095 3.431572 CGCACCAGAAGAAGAAGAAGAAG 59.568 47.826 0.00 0.00 0.00 2.85
1025 3096 3.393800 CGCACCAGAAGAAGAAGAAGAA 58.606 45.455 0.00 0.00 0.00 2.52
1026 3097 2.868044 GCGCACCAGAAGAAGAAGAAGA 60.868 50.000 0.30 0.00 0.00 2.87
1027 3098 1.462670 GCGCACCAGAAGAAGAAGAAG 59.537 52.381 0.30 0.00 0.00 2.85
1028 3099 1.512926 GCGCACCAGAAGAAGAAGAA 58.487 50.000 0.30 0.00 0.00 2.52
1029 3100 0.320771 GGCGCACCAGAAGAAGAAGA 60.321 55.000 10.83 0.00 35.26 2.87
1030 3101 1.301677 GGGCGCACCAGAAGAAGAAG 61.302 60.000 10.83 0.00 39.85 2.85
1031 3102 1.302511 GGGCGCACCAGAAGAAGAA 60.303 57.895 10.83 0.00 39.85 2.52
1032 3103 2.347490 GGGCGCACCAGAAGAAGA 59.653 61.111 10.83 0.00 39.85 2.87
1033 3104 3.121030 CGGGCGCACCAGAAGAAG 61.121 66.667 10.83 0.00 40.22 2.85
1034 3105 3.876589 GACGGGCGCACCAGAAGAA 62.877 63.158 10.83 0.00 40.22 2.52
1035 3106 4.373116 GACGGGCGCACCAGAAGA 62.373 66.667 10.83 0.00 40.22 2.87
1051 3122 4.783621 ATCGGACGGACGGACGGA 62.784 66.667 6.00 7.03 38.39 4.69
1052 3123 4.247612 GATCGGACGGACGGACGG 62.248 72.222 6.00 0.00 38.39 4.79
1056 3127 3.445687 TGTGGATCGGACGGACGG 61.446 66.667 0.00 0.00 0.00 4.79
1057 3128 2.202570 GTGTGGATCGGACGGACG 60.203 66.667 0.00 0.00 0.00 4.79
1062 3133 1.079127 CTGGGTGTGTGGATCGGAC 60.079 63.158 0.00 0.00 0.00 4.79
1065 3136 1.446099 CGTCTGGGTGTGTGGATCG 60.446 63.158 0.00 0.00 0.00 3.69
1069 3140 1.006102 GAGACGTCTGGGTGTGTGG 60.006 63.158 25.58 0.00 0.00 4.17
1072 3143 0.038159 GAAGGAGACGTCTGGGTGTG 60.038 60.000 25.58 0.00 35.80 3.82
1080 3151 1.038681 GGGAGGGAGAAGGAGACGTC 61.039 65.000 7.70 7.70 39.33 4.34
1083 3154 1.334384 GCAGGGAGGGAGAAGGAGAC 61.334 65.000 0.00 0.00 0.00 3.36
1084 3155 1.002274 GCAGGGAGGGAGAAGGAGA 59.998 63.158 0.00 0.00 0.00 3.71
1086 3157 1.002274 GAGCAGGGAGGGAGAAGGA 59.998 63.158 0.00 0.00 0.00 3.36
1087 3158 0.620121 AAGAGCAGGGAGGGAGAAGG 60.620 60.000 0.00 0.00 0.00 3.46
1088 3159 0.829990 GAAGAGCAGGGAGGGAGAAG 59.170 60.000 0.00 0.00 0.00 2.85
1089 3160 0.117140 TGAAGAGCAGGGAGGGAGAA 59.883 55.000 0.00 0.00 0.00 2.87
1090 3161 0.117140 TTGAAGAGCAGGGAGGGAGA 59.883 55.000 0.00 0.00 0.00 3.71
1093 3164 1.606531 CCTTGAAGAGCAGGGAGGG 59.393 63.158 0.00 0.00 46.23 4.30
1096 3167 0.546267 AGAGCCTTGAAGAGCAGGGA 60.546 55.000 8.07 0.00 46.23 4.20
1097 3168 1.198713 TAGAGCCTTGAAGAGCAGGG 58.801 55.000 8.07 0.00 46.08 4.45
1099 3170 4.121317 CAAGATAGAGCCTTGAAGAGCAG 58.879 47.826 8.07 0.00 42.57 4.24
1100 3171 3.681034 GCAAGATAGAGCCTTGAAGAGCA 60.681 47.826 7.02 0.00 42.57 4.26
1101 3172 2.871633 GCAAGATAGAGCCTTGAAGAGC 59.128 50.000 7.02 0.00 42.57 4.09
1103 3174 2.159043 CCGCAAGATAGAGCCTTGAAGA 60.159 50.000 7.02 0.00 42.57 2.87
1104 3175 2.159043 TCCGCAAGATAGAGCCTTGAAG 60.159 50.000 7.02 0.00 42.57 3.02
1105 3176 1.831106 TCCGCAAGATAGAGCCTTGAA 59.169 47.619 7.02 0.00 42.57 2.69
1106 3177 1.410517 CTCCGCAAGATAGAGCCTTGA 59.589 52.381 7.02 0.00 42.57 3.02
1107 3178 1.539929 CCTCCGCAAGATAGAGCCTTG 60.540 57.143 0.00 0.00 42.77 3.61
1108 3179 0.755686 CCTCCGCAAGATAGAGCCTT 59.244 55.000 0.00 0.00 43.02 4.35
1109 3180 0.397816 ACCTCCGCAAGATAGAGCCT 60.398 55.000 0.00 0.00 43.02 4.58
1111 3182 0.249657 CCACCTCCGCAAGATAGAGC 60.250 60.000 0.00 0.00 43.02 4.09
1112 3183 0.390860 CCCACCTCCGCAAGATAGAG 59.609 60.000 0.00 0.00 43.02 2.43
1113 3184 0.032515 TCCCACCTCCGCAAGATAGA 60.033 55.000 0.00 0.00 43.02 1.98
1114 3185 0.105039 GTCCCACCTCCGCAAGATAG 59.895 60.000 0.00 0.00 43.02 2.08
1115 3186 0.616395 TGTCCCACCTCCGCAAGATA 60.616 55.000 0.00 0.00 43.02 1.98
1116 3187 1.488705 TTGTCCCACCTCCGCAAGAT 61.489 55.000 0.00 0.00 43.02 2.40
1117 3188 2.144078 TTGTCCCACCTCCGCAAGA 61.144 57.895 0.00 0.00 43.02 3.02
1118 3189 1.966451 GTTGTCCCACCTCCGCAAG 60.966 63.158 0.00 0.00 0.00 4.01
1120 3191 2.674563 CTTGTTGTCCCACCTCCGCA 62.675 60.000 0.00 0.00 0.00 5.69
1121 3192 1.966451 CTTGTTGTCCCACCTCCGC 60.966 63.158 0.00 0.00 0.00 5.54
1122 3193 0.324943 ATCTTGTTGTCCCACCTCCG 59.675 55.000 0.00 0.00 0.00 4.63
1124 3195 2.427506 GACATCTTGTTGTCCCACCTC 58.572 52.381 1.53 0.00 40.11 3.85
1125 3196 1.270839 CGACATCTTGTTGTCCCACCT 60.271 52.381 6.33 0.00 42.46 4.00
1126 3197 1.156736 CGACATCTTGTTGTCCCACC 58.843 55.000 6.33 0.00 42.46 4.61
1127 3198 1.156736 CCGACATCTTGTTGTCCCAC 58.843 55.000 6.33 0.00 42.46 4.61
1128 3199 0.762418 ACCGACATCTTGTTGTCCCA 59.238 50.000 6.33 0.00 42.46 4.37
1130 3201 0.517316 GCACCGACATCTTGTTGTCC 59.483 55.000 6.33 0.00 42.46 4.02
1131 3202 1.195448 CAGCACCGACATCTTGTTGTC 59.805 52.381 2.66 2.66 42.10 3.18
1154 3267 1.596477 GATCTCCGCCAGCATGTCC 60.596 63.158 0.00 0.00 0.00 4.02
1170 3283 3.470888 CGTGGGCTCCCGGAAGAT 61.471 66.667 0.73 0.00 39.42 2.40
1366 3482 3.716006 CGGCAACAGTGGTCTGCG 61.716 66.667 0.00 0.00 44.77 5.18
1369 3485 2.426023 GGTCGGCAACAGTGGTCT 59.574 61.111 0.00 0.00 0.00 3.85
1370 3486 2.110213 TGGTCGGCAACAGTGGTC 59.890 61.111 0.00 0.00 0.00 4.02
1371 3487 2.203153 GTGGTCGGCAACAGTGGT 60.203 61.111 0.00 0.00 0.00 4.16
1373 3489 1.648720 CAAGTGGTCGGCAACAGTG 59.351 57.895 0.00 0.00 0.00 3.66
1374 3490 1.525995 CCAAGTGGTCGGCAACAGT 60.526 57.895 0.00 0.00 0.00 3.55
1375 3491 3.343972 CCAAGTGGTCGGCAACAG 58.656 61.111 0.00 0.00 0.00 3.16
1419 3547 6.656693 AGGAGGATATGTTTCTTGAAACACAG 59.343 38.462 25.13 0.00 44.39 3.66
1423 3551 5.163612 GGCAGGAGGATATGTTTCTTGAAAC 60.164 44.000 16.62 16.62 0.00 2.78
1430 3558 1.202940 GGGGGCAGGAGGATATGTTTC 60.203 57.143 0.00 0.00 0.00 2.78
1434 3562 1.078955 ATTGGGGGCAGGAGGATATG 58.921 55.000 0.00 0.00 0.00 1.78
1518 3646 2.194212 CGAGGCCGCCTTAGCTCTA 61.194 63.158 14.70 0.00 36.60 2.43
1549 3677 0.253327 ACCGCCAATTCTTCCTCCTC 59.747 55.000 0.00 0.00 0.00 3.71
1550 3678 0.253327 GACCGCCAATTCTTCCTCCT 59.747 55.000 0.00 0.00 0.00 3.69
1602 3733 2.047443 GCCGTCCTTCTCCTCGACT 61.047 63.158 0.00 0.00 0.00 4.18
1734 3867 3.857157 TTCTTGGGTTCTACAGTTGCT 57.143 42.857 0.00 0.00 0.00 3.91
1735 3868 5.453567 AAATTCTTGGGTTCTACAGTTGC 57.546 39.130 0.00 0.00 0.00 4.17
1736 3869 6.805713 ACAAAATTCTTGGGTTCTACAGTTG 58.194 36.000 5.68 0.00 0.00 3.16
1737 3870 6.833933 AGACAAAATTCTTGGGTTCTACAGTT 59.166 34.615 5.68 0.00 0.00 3.16
1744 3877 5.514274 TGACAGACAAAATTCTTGGGTTC 57.486 39.130 5.68 0.00 0.00 3.62
1853 3991 6.969366 TGTCATCAATCCAAAAACAGTAGTG 58.031 36.000 0.00 0.00 0.00 2.74
1909 4050 7.491372 ACTGAATTACTGAATCGAAATTCGCTA 59.509 33.333 10.93 0.00 43.61 4.26
1911 4052 6.409185 CACTGAATTACTGAATCGAAATTCGC 59.591 38.462 10.93 0.00 43.61 4.70
1916 4057 9.483916 TCTAAACACTGAATTACTGAATCGAAA 57.516 29.630 0.00 0.00 0.00 3.46
1947 4088 7.753309 TGAGCTCTAGGATAGTTGTATCTTC 57.247 40.000 16.19 0.00 40.38 2.87
1951 4092 7.237982 ACTCATGAGCTCTAGGATAGTTGTAT 58.762 38.462 22.83 0.00 40.38 2.29
1952 4093 6.606069 ACTCATGAGCTCTAGGATAGTTGTA 58.394 40.000 22.83 0.00 40.38 2.41
1953 4094 5.454062 ACTCATGAGCTCTAGGATAGTTGT 58.546 41.667 22.83 1.32 40.38 3.32
1954 4095 6.403866 AACTCATGAGCTCTAGGATAGTTG 57.596 41.667 22.83 0.74 40.38 3.16
1961 4105 7.678218 GCAAACATTTAACTCATGAGCTCTAGG 60.678 40.741 22.83 10.96 0.00 3.02
1972 4116 4.278170 CAGAGGGTGCAAACATTTAACTCA 59.722 41.667 0.00 0.00 0.00 3.41
1975 4119 4.584327 ACAGAGGGTGCAAACATTTAAC 57.416 40.909 0.00 0.00 0.00 2.01
1977 4121 4.646945 TGAAACAGAGGGTGCAAACATTTA 59.353 37.500 0.00 0.00 0.00 1.40
1988 4135 3.756117 GTTCTGGAATGAAACAGAGGGT 58.244 45.455 0.00 0.00 43.84 4.34
1990 4137 2.744202 CCGTTCTGGAATGAAACAGAGG 59.256 50.000 4.32 0.00 43.84 3.69
1993 4140 1.200020 GGCCGTTCTGGAATGAAACAG 59.800 52.381 4.32 0.00 42.00 3.16
2174 4324 3.322466 ACCTTCCTGACCCAGCGG 61.322 66.667 0.00 0.00 0.00 5.52
2196 4346 2.832129 GGGAGGGATATCACGCAGATAA 59.168 50.000 11.05 0.00 42.27 1.75
2247 4397 6.187125 AGCAGTGTAAGCAAAAGATACATG 57.813 37.500 0.00 0.00 32.65 3.21
2373 4523 9.712305 ATATAAAGCTATACCACTTCATCACAC 57.288 33.333 0.00 0.00 0.00 3.82
2421 4578 2.285220 AGCAATCGCATGAACGTGTATC 59.715 45.455 0.00 0.00 42.27 2.24
2536 4708 4.095483 CACAGAGAAAGCGGCAATAAATCT 59.905 41.667 1.45 0.00 0.00 2.40
2557 4741 6.554419 TGCAGTGCATCTTATAATCAAACAC 58.446 36.000 15.37 0.00 31.71 3.32
2674 4860 7.759489 TTAGTGATCTGTTTTGCCTAAATGT 57.241 32.000 0.00 0.00 0.00 2.71
2678 4864 7.665559 AGACATTTAGTGATCTGTTTTGCCTAA 59.334 33.333 0.00 0.00 0.00 2.69
2679 4865 7.168219 AGACATTTAGTGATCTGTTTTGCCTA 58.832 34.615 0.00 0.00 0.00 3.93
2680 4866 6.006449 AGACATTTAGTGATCTGTTTTGCCT 58.994 36.000 0.00 0.00 0.00 4.75
2681 4867 6.259550 AGACATTTAGTGATCTGTTTTGCC 57.740 37.500 0.00 0.00 0.00 4.52
2683 4869 9.817365 CAGTAAGACATTTAGTGATCTGTTTTG 57.183 33.333 0.00 0.00 0.00 2.44
2725 4930 8.802267 TCTGTTTGGCTAAATAAAGCAATACTT 58.198 29.630 0.00 0.00 44.64 2.24
2726 4931 8.348285 TCTGTTTGGCTAAATAAAGCAATACT 57.652 30.769 0.00 0.00 44.64 2.12
2727 4932 9.237846 GATCTGTTTGGCTAAATAAAGCAATAC 57.762 33.333 0.00 0.00 44.64 1.89
2728 4933 8.965819 TGATCTGTTTGGCTAAATAAAGCAATA 58.034 29.630 0.00 0.00 44.64 1.90
2729 4934 7.839907 TGATCTGTTTGGCTAAATAAAGCAAT 58.160 30.769 0.00 0.00 44.64 3.56
2730 4935 7.225784 TGATCTGTTTGGCTAAATAAAGCAA 57.774 32.000 0.00 0.00 44.64 3.91
2731 4936 6.832520 TGATCTGTTTGGCTAAATAAAGCA 57.167 33.333 0.00 0.00 44.64 3.91
2732 4937 9.801873 TTAATGATCTGTTTGGCTAAATAAAGC 57.198 29.630 0.00 0.00 41.99 3.51
2737 4942 9.807649 GACATTTAATGATCTGTTTGGCTAAAT 57.192 29.630 12.28 0.00 0.00 1.40
2738 4943 9.023962 AGACATTTAATGATCTGTTTGGCTAAA 57.976 29.630 12.28 0.00 0.00 1.85
2739 4944 8.579850 AGACATTTAATGATCTGTTTGGCTAA 57.420 30.769 12.28 0.00 0.00 3.09
2740 4945 8.579850 AAGACATTTAATGATCTGTTTGGCTA 57.420 30.769 12.28 0.00 0.00 3.93
2741 4946 7.363268 GGAAGACATTTAATGATCTGTTTGGCT 60.363 37.037 12.28 0.00 0.00 4.75
2742 4947 6.753744 GGAAGACATTTAATGATCTGTTTGGC 59.246 38.462 12.28 0.00 0.00 4.52
2743 4948 7.972277 CAGGAAGACATTTAATGATCTGTTTGG 59.028 37.037 12.28 0.00 0.00 3.28
2744 4949 7.487189 GCAGGAAGACATTTAATGATCTGTTTG 59.513 37.037 12.28 9.92 0.00 2.93
2745 4950 7.177216 TGCAGGAAGACATTTAATGATCTGTTT 59.823 33.333 12.28 0.00 0.00 2.83
2746 4951 6.660521 TGCAGGAAGACATTTAATGATCTGTT 59.339 34.615 12.28 0.00 0.00 3.16
2747 4952 6.182627 TGCAGGAAGACATTTAATGATCTGT 58.817 36.000 12.28 0.00 0.00 3.41
2748 4953 6.688637 TGCAGGAAGACATTTAATGATCTG 57.311 37.500 12.28 11.12 0.00 2.90
2749 4954 7.893124 AATGCAGGAAGACATTTAATGATCT 57.107 32.000 12.28 7.87 32.67 2.75
2750 4955 8.937634 AAAATGCAGGAAGACATTTAATGATC 57.062 30.769 12.28 5.80 43.76 2.92
2751 4956 9.374838 GAAAAATGCAGGAAGACATTTAATGAT 57.625 29.630 12.28 0.00 43.76 2.45
2752 4957 8.587608 AGAAAAATGCAGGAAGACATTTAATGA 58.412 29.630 12.28 0.00 43.76 2.57
2753 4958 8.767478 AGAAAAATGCAGGAAGACATTTAATG 57.233 30.769 3.07 3.07 43.76 1.90
2754 4959 8.587608 TGAGAAAAATGCAGGAAGACATTTAAT 58.412 29.630 0.00 0.00 43.76 1.40
2755 4960 7.950512 TGAGAAAAATGCAGGAAGACATTTAA 58.049 30.769 0.00 0.00 43.76 1.52
2756 4961 7.448161 TCTGAGAAAAATGCAGGAAGACATTTA 59.552 33.333 0.00 0.00 43.76 1.40
2757 4962 6.266103 TCTGAGAAAAATGCAGGAAGACATTT 59.734 34.615 0.00 0.00 45.84 2.32
2758 4963 5.771666 TCTGAGAAAAATGCAGGAAGACATT 59.228 36.000 0.00 0.00 38.11 2.71
2759 4964 5.319453 TCTGAGAAAAATGCAGGAAGACAT 58.681 37.500 0.00 0.00 0.00 3.06
2760 4965 4.717877 TCTGAGAAAAATGCAGGAAGACA 58.282 39.130 0.00 0.00 0.00 3.41
2761 4966 4.759183 ACTCTGAGAAAAATGCAGGAAGAC 59.241 41.667 12.44 0.00 0.00 3.01
2762 4967 4.758674 CACTCTGAGAAAAATGCAGGAAGA 59.241 41.667 12.44 0.00 0.00 2.87
2763 4968 4.518211 ACACTCTGAGAAAAATGCAGGAAG 59.482 41.667 12.44 0.00 0.00 3.46
2764 4969 4.464008 ACACTCTGAGAAAAATGCAGGAA 58.536 39.130 12.44 0.00 0.00 3.36
2765 4970 4.090761 ACACTCTGAGAAAAATGCAGGA 57.909 40.909 12.44 0.00 0.00 3.86
2766 4971 4.154918 GGTACACTCTGAGAAAAATGCAGG 59.845 45.833 12.44 0.00 0.00 4.85
2767 4972 4.999950 AGGTACACTCTGAGAAAAATGCAG 59.000 41.667 12.44 0.00 0.00 4.41
2768 4973 4.973168 AGGTACACTCTGAGAAAAATGCA 58.027 39.130 12.44 0.00 0.00 3.96
2769 4974 4.092091 CGAGGTACACTCTGAGAAAAATGC 59.908 45.833 12.44 0.00 44.33 3.56
2770 4975 5.230942 ACGAGGTACACTCTGAGAAAAATG 58.769 41.667 12.44 1.01 44.33 2.32
2771 4976 5.470047 ACGAGGTACACTCTGAGAAAAAT 57.530 39.130 12.44 0.00 44.33 1.82
2772 4977 4.261909 GGACGAGGTACACTCTGAGAAAAA 60.262 45.833 12.44 0.00 44.33 1.94
2773 4978 3.255149 GGACGAGGTACACTCTGAGAAAA 59.745 47.826 12.44 0.00 44.33 2.29
2774 4979 2.818432 GGACGAGGTACACTCTGAGAAA 59.182 50.000 12.44 0.00 44.33 2.52
2775 4980 2.434428 GGACGAGGTACACTCTGAGAA 58.566 52.381 12.44 0.00 44.33 2.87
2776 4981 1.339824 GGGACGAGGTACACTCTGAGA 60.340 57.143 12.44 0.00 44.33 3.27
2777 4982 1.096416 GGGACGAGGTACACTCTGAG 58.904 60.000 2.45 2.45 44.33 3.35
2778 4983 0.697079 AGGGACGAGGTACACTCTGA 59.303 55.000 0.00 0.00 44.33 3.27
2779 4984 1.096416 GAGGGACGAGGTACACTCTG 58.904 60.000 0.00 0.00 44.33 3.35
2780 4985 0.993470 AGAGGGACGAGGTACACTCT 59.007 55.000 0.00 0.00 44.33 3.24
2781 4986 1.096416 CAGAGGGACGAGGTACACTC 58.904 60.000 0.00 0.00 43.02 3.51
2782 4987 0.404812 ACAGAGGGACGAGGTACACT 59.595 55.000 0.00 0.00 0.00 3.55
2783 4988 1.201880 GAACAGAGGGACGAGGTACAC 59.798 57.143 0.00 0.00 0.00 2.90
2784 4989 1.542492 GAACAGAGGGACGAGGTACA 58.458 55.000 0.00 0.00 0.00 2.90
2787 4992 0.471211 TTGGAACAGAGGGACGAGGT 60.471 55.000 0.00 0.00 42.39 3.85
2826 5031 2.613133 GCTAGAGTAGTACAGGTCCACG 59.387 54.545 2.52 0.00 0.00 4.94
2966 5171 1.447663 CGTCATCGCACCATCACCA 60.448 57.895 0.00 0.00 0.00 4.17
2978 5183 2.202932 ACCTCGCATGCCGTCATC 60.203 61.111 13.15 0.00 38.35 2.92
3128 5333 1.502163 CGCATTTCGAGATGGGCTCC 61.502 60.000 18.02 1.04 40.70 4.70
3254 5459 2.193536 GTTGCCCGTCCAGTGCTTT 61.194 57.895 0.00 0.00 0.00 3.51
3323 5528 0.472925 TGGTCAGTAGCCCCTTGTCA 60.473 55.000 0.00 0.00 0.00 3.58
3344 5549 1.436336 CGTTCCGAATACGAGGGCT 59.564 57.895 0.00 0.00 41.33 5.19
3550 5765 5.408299 CAGCTACAGCAGTATGTACACAAAA 59.592 40.000 0.00 0.00 45.16 2.44
3551 5766 4.929211 CAGCTACAGCAGTATGTACACAAA 59.071 41.667 0.00 0.00 45.16 2.83
3680 5904 7.436118 TCCAAAATATGAGCCTTATTCATTGC 58.564 34.615 0.00 0.00 36.68 3.56
3791 6015 5.525745 CCATAGGTAAATCAACACATGCGTA 59.474 40.000 0.00 0.00 0.00 4.42
3801 6025 6.207810 GTCAACACCAACCATAGGTAAATCAA 59.792 38.462 0.00 0.00 37.23 2.57
3917 6145 4.839668 TTCCGACATTTTGACCGAAAAT 57.160 36.364 0.00 0.00 43.77 1.82
3956 6184 4.020218 GGCAGGTTCATATAGCATCACCTA 60.020 45.833 0.00 0.00 32.66 3.08
4126 6776 5.999205 AAACATTGCAAATATGTCAGGGA 57.001 34.783 1.71 0.00 35.26 4.20
4179 6829 2.430465 AGGTGCTGAATGCTAACAGTG 58.570 47.619 0.00 0.00 43.37 3.66
4251 6901 5.827797 TGTTGAAGAACATTTTAGTCTGCCT 59.172 36.000 0.00 0.00 37.15 4.75
4272 6922 4.530710 TTAGCGGTCAGAGTTGTATGTT 57.469 40.909 0.00 0.00 0.00 2.71
4310 6960 9.245481 TGTAATTTTTCCTGGGTTTCGTAATAT 57.755 29.630 0.00 0.00 0.00 1.28
4338 6988 2.697751 CCATGGGAAGTTGTTTTGTGGA 59.302 45.455 2.85 0.00 0.00 4.02
4341 6992 2.114616 TGCCATGGGAAGTTGTTTTGT 58.885 42.857 15.13 0.00 0.00 2.83
4482 7148 4.842531 TGTGTCATATTGATCTGGTGGT 57.157 40.909 0.00 0.00 0.00 4.16
4527 7193 3.707793 CACGGCAAGTACTATTCTCTCC 58.292 50.000 0.00 0.00 0.00 3.71
4549 7215 4.092116 AGTGGAAAGGAAACAAGGAGAG 57.908 45.455 0.00 0.00 0.00 3.20
4630 7297 3.063588 GCAACGTTTATTCCCTCACTAGC 59.936 47.826 0.00 0.00 0.00 3.42


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.