Multiple sequence alignment - TraesCS2A01G009800
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2A01G009800 | chr2A | 100.000 | 3898 | 0 | 0 | 1 | 3898 | 3866016 | 3862119 | 0.000000e+00 | 7199.0 |
1 | TraesCS2A01G009800 | chr2A | 87.946 | 813 | 61 | 20 | 308 | 1112 | 11026405 | 11025622 | 0.000000e+00 | 924.0 |
2 | TraesCS2A01G009800 | chr2A | 95.246 | 568 | 26 | 1 | 3331 | 3897 | 16907464 | 16906897 | 0.000000e+00 | 898.0 |
3 | TraesCS2A01G009800 | chr2A | 91.930 | 570 | 40 | 5 | 3331 | 3895 | 7380339 | 7379771 | 0.000000e+00 | 793.0 |
4 | TraesCS2A01G009800 | chr2D | 92.010 | 1940 | 117 | 12 | 1137 | 3072 | 10750782 | 10748877 | 0.000000e+00 | 2689.0 |
5 | TraesCS2A01G009800 | chr2D | 84.245 | 1847 | 251 | 33 | 1135 | 2966 | 10800434 | 10798613 | 0.000000e+00 | 1762.0 |
6 | TraesCS2A01G009800 | chr2D | 89.702 | 806 | 54 | 14 | 308 | 1104 | 10751571 | 10750786 | 0.000000e+00 | 1002.0 |
7 | TraesCS2A01G009800 | chr2D | 95.782 | 569 | 22 | 2 | 3331 | 3897 | 29663375 | 29662807 | 0.000000e+00 | 917.0 |
8 | TraesCS2A01G009800 | chr2D | 82.562 | 281 | 33 | 10 | 4 | 277 | 608864383 | 608864112 | 2.340000e-57 | 233.0 |
9 | TraesCS2A01G009800 | chr2D | 86.755 | 151 | 19 | 1 | 3110 | 3259 | 499935834 | 499935684 | 2.410000e-37 | 167.0 |
10 | TraesCS2A01G009800 | chr2B | 85.251 | 1790 | 226 | 26 | 1137 | 2916 | 15917462 | 15915701 | 0.000000e+00 | 1808.0 |
11 | TraesCS2A01G009800 | chr2B | 85.196 | 1790 | 227 | 26 | 1137 | 2916 | 15818491 | 15816730 | 0.000000e+00 | 1803.0 |
12 | TraesCS2A01G009800 | chr2B | 83.460 | 1844 | 265 | 31 | 1135 | 2965 | 15962367 | 15960551 | 0.000000e+00 | 1679.0 |
13 | TraesCS2A01G009800 | chr2B | 83.378 | 1847 | 262 | 36 | 1135 | 2965 | 15790216 | 15788399 | 0.000000e+00 | 1668.0 |
14 | TraesCS2A01G009800 | chr2B | 83.306 | 1845 | 266 | 33 | 1135 | 2965 | 15727149 | 15725333 | 0.000000e+00 | 1663.0 |
15 | TraesCS2A01G009800 | chr2B | 93.433 | 1066 | 67 | 1 | 1132 | 2197 | 14952519 | 14951457 | 0.000000e+00 | 1578.0 |
16 | TraesCS2A01G009800 | chr2B | 89.356 | 808 | 59 | 18 | 308 | 1106 | 15091019 | 15090230 | 0.000000e+00 | 990.0 |
17 | TraesCS2A01G009800 | chr2B | 86.229 | 472 | 39 | 4 | 641 | 1112 | 14952947 | 14952502 | 4.530000e-134 | 488.0 |
18 | TraesCS2A01G009800 | chr2B | 86.705 | 173 | 18 | 4 | 3088 | 3259 | 210016547 | 210016715 | 1.850000e-43 | 187.0 |
19 | TraesCS2A01G009800 | chr2B | 86.765 | 68 | 7 | 1 | 345 | 412 | 15410071 | 15410006 | 1.500000e-09 | 75.0 |
20 | TraesCS2A01G009800 | chr2B | 97.436 | 39 | 1 | 0 | 378 | 416 | 15696350 | 15696312 | 2.510000e-07 | 67.6 |
21 | TraesCS2A01G009800 | chr2B | 97.436 | 39 | 1 | 0 | 378 | 416 | 15758471 | 15758433 | 2.510000e-07 | 67.6 |
22 | TraesCS2A01G009800 | chr2B | 97.436 | 39 | 1 | 0 | 378 | 416 | 15819657 | 15819619 | 2.510000e-07 | 67.6 |
23 | TraesCS2A01G009800 | chr2B | 97.436 | 39 | 1 | 0 | 378 | 416 | 15918628 | 15918590 | 2.510000e-07 | 67.6 |
24 | TraesCS2A01G009800 | chrUn | 83.595 | 1847 | 263 | 31 | 1132 | 2965 | 339546793 | 339548612 | 0.000000e+00 | 1696.0 |
25 | TraesCS2A01G009800 | chrUn | 83.460 | 1844 | 265 | 31 | 1135 | 2965 | 339561247 | 339559431 | 0.000000e+00 | 1679.0 |
26 | TraesCS2A01G009800 | chrUn | 93.433 | 1066 | 67 | 1 | 1132 | 2197 | 303367520 | 303368582 | 0.000000e+00 | 1578.0 |
27 | TraesCS2A01G009800 | chrUn | 93.433 | 1066 | 67 | 1 | 1132 | 2197 | 303429895 | 303430957 | 0.000000e+00 | 1578.0 |
28 | TraesCS2A01G009800 | chrUn | 86.229 | 472 | 39 | 4 | 641 | 1112 | 303367092 | 303367537 | 4.530000e-134 | 488.0 |
29 | TraesCS2A01G009800 | chrUn | 86.229 | 472 | 39 | 4 | 641 | 1112 | 303429467 | 303429912 | 4.530000e-134 | 488.0 |
30 | TraesCS2A01G009800 | chr1D | 95.255 | 569 | 22 | 4 | 3331 | 3897 | 408961224 | 408961789 | 0.000000e+00 | 896.0 |
31 | TraesCS2A01G009800 | chr7D | 94.249 | 539 | 30 | 1 | 3331 | 3868 | 102957903 | 102957365 | 0.000000e+00 | 822.0 |
32 | TraesCS2A01G009800 | chr7D | 92.778 | 540 | 37 | 2 | 3331 | 3868 | 194500784 | 194501323 | 0.000000e+00 | 780.0 |
33 | TraesCS2A01G009800 | chr7D | 86.624 | 157 | 20 | 1 | 3104 | 3259 | 446506164 | 446506320 | 5.180000e-39 | 172.0 |
34 | TraesCS2A01G009800 | chr1B | 92.119 | 571 | 39 | 5 | 3331 | 3897 | 671460792 | 671461360 | 0.000000e+00 | 800.0 |
35 | TraesCS2A01G009800 | chr6A | 91.478 | 575 | 40 | 6 | 3331 | 3897 | 121713118 | 121713691 | 0.000000e+00 | 782.0 |
36 | TraesCS2A01G009800 | chr4B | 90.909 | 572 | 45 | 6 | 3331 | 3897 | 637369062 | 637369631 | 0.000000e+00 | 761.0 |
37 | TraesCS2A01G009800 | chr4B | 83.969 | 262 | 30 | 8 | 22 | 276 | 165999094 | 165998838 | 1.400000e-59 | 241.0 |
38 | TraesCS2A01G009800 | chr4B | 80.919 | 283 | 38 | 13 | 1 | 273 | 89406586 | 89406862 | 3.950000e-50 | 209.0 |
39 | TraesCS2A01G009800 | chr4D | 82.686 | 283 | 42 | 5 | 1 | 278 | 493928042 | 493928322 | 1.080000e-60 | 244.0 |
40 | TraesCS2A01G009800 | chr4D | 81.362 | 279 | 36 | 12 | 4 | 273 | 61128121 | 61127850 | 3.050000e-51 | 213.0 |
41 | TraesCS2A01G009800 | chr3B | 83.154 | 279 | 35 | 10 | 3 | 272 | 141802951 | 141802676 | 1.080000e-60 | 244.0 |
42 | TraesCS2A01G009800 | chr3B | 81.720 | 279 | 40 | 8 | 1 | 272 | 828296190 | 828296464 | 5.070000e-54 | 222.0 |
43 | TraesCS2A01G009800 | chr7B | 81.851 | 281 | 42 | 7 | 2 | 276 | 491146740 | 491147017 | 1.090000e-55 | 228.0 |
44 | TraesCS2A01G009800 | chr5B | 80.783 | 281 | 43 | 8 | 4 | 277 | 288391859 | 288392135 | 3.950000e-50 | 209.0 |
45 | TraesCS2A01G009800 | chr5B | 85.542 | 83 | 8 | 3 | 3090 | 3172 | 75540277 | 75540355 | 2.500000e-12 | 84.2 |
46 | TraesCS2A01G009800 | chr7A | 86.047 | 172 | 21 | 2 | 3089 | 3259 | 497282269 | 497282438 | 8.600000e-42 | 182.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS2A01G009800 | chr2A | 3862119 | 3866016 | 3897 | True | 7199.0 | 7199 | 100.0000 | 1 | 3898 | 1 | chr2A.!!$R1 | 3897 |
1 | TraesCS2A01G009800 | chr2A | 11025622 | 11026405 | 783 | True | 924.0 | 924 | 87.9460 | 308 | 1112 | 1 | chr2A.!!$R3 | 804 |
2 | TraesCS2A01G009800 | chr2A | 16906897 | 16907464 | 567 | True | 898.0 | 898 | 95.2460 | 3331 | 3897 | 1 | chr2A.!!$R4 | 566 |
3 | TraesCS2A01G009800 | chr2A | 7379771 | 7380339 | 568 | True | 793.0 | 793 | 91.9300 | 3331 | 3895 | 1 | chr2A.!!$R2 | 564 |
4 | TraesCS2A01G009800 | chr2D | 10748877 | 10751571 | 2694 | True | 1845.5 | 2689 | 90.8560 | 308 | 3072 | 2 | chr2D.!!$R5 | 2764 |
5 | TraesCS2A01G009800 | chr2D | 10798613 | 10800434 | 1821 | True | 1762.0 | 1762 | 84.2450 | 1135 | 2966 | 1 | chr2D.!!$R1 | 1831 |
6 | TraesCS2A01G009800 | chr2D | 29662807 | 29663375 | 568 | True | 917.0 | 917 | 95.7820 | 3331 | 3897 | 1 | chr2D.!!$R2 | 566 |
7 | TraesCS2A01G009800 | chr2B | 15960551 | 15962367 | 1816 | True | 1679.0 | 1679 | 83.4600 | 1135 | 2965 | 1 | chr2B.!!$R7 | 1830 |
8 | TraesCS2A01G009800 | chr2B | 15788399 | 15790216 | 1817 | True | 1668.0 | 1668 | 83.3780 | 1135 | 2965 | 1 | chr2B.!!$R6 | 1830 |
9 | TraesCS2A01G009800 | chr2B | 15725333 | 15727149 | 1816 | True | 1663.0 | 1663 | 83.3060 | 1135 | 2965 | 1 | chr2B.!!$R4 | 1830 |
10 | TraesCS2A01G009800 | chr2B | 14951457 | 14952947 | 1490 | True | 1033.0 | 1578 | 89.8310 | 641 | 2197 | 2 | chr2B.!!$R8 | 1556 |
11 | TraesCS2A01G009800 | chr2B | 15090230 | 15091019 | 789 | True | 990.0 | 990 | 89.3560 | 308 | 1106 | 1 | chr2B.!!$R1 | 798 |
12 | TraesCS2A01G009800 | chr2B | 15915701 | 15918628 | 2927 | True | 937.8 | 1808 | 91.3435 | 378 | 2916 | 2 | chr2B.!!$R10 | 2538 |
13 | TraesCS2A01G009800 | chr2B | 15816730 | 15819657 | 2927 | True | 935.3 | 1803 | 91.3160 | 378 | 2916 | 2 | chr2B.!!$R9 | 2538 |
14 | TraesCS2A01G009800 | chrUn | 339546793 | 339548612 | 1819 | False | 1696.0 | 1696 | 83.5950 | 1132 | 2965 | 1 | chrUn.!!$F1 | 1833 |
15 | TraesCS2A01G009800 | chrUn | 339559431 | 339561247 | 1816 | True | 1679.0 | 1679 | 83.4600 | 1135 | 2965 | 1 | chrUn.!!$R1 | 1830 |
16 | TraesCS2A01G009800 | chrUn | 303367092 | 303368582 | 1490 | False | 1033.0 | 1578 | 89.8310 | 641 | 2197 | 2 | chrUn.!!$F2 | 1556 |
17 | TraesCS2A01G009800 | chrUn | 303429467 | 303430957 | 1490 | False | 1033.0 | 1578 | 89.8310 | 641 | 2197 | 2 | chrUn.!!$F3 | 1556 |
18 | TraesCS2A01G009800 | chr1D | 408961224 | 408961789 | 565 | False | 896.0 | 896 | 95.2550 | 3331 | 3897 | 1 | chr1D.!!$F1 | 566 |
19 | TraesCS2A01G009800 | chr7D | 102957365 | 102957903 | 538 | True | 822.0 | 822 | 94.2490 | 3331 | 3868 | 1 | chr7D.!!$R1 | 537 |
20 | TraesCS2A01G009800 | chr7D | 194500784 | 194501323 | 539 | False | 780.0 | 780 | 92.7780 | 3331 | 3868 | 1 | chr7D.!!$F1 | 537 |
21 | TraesCS2A01G009800 | chr1B | 671460792 | 671461360 | 568 | False | 800.0 | 800 | 92.1190 | 3331 | 3897 | 1 | chr1B.!!$F1 | 566 |
22 | TraesCS2A01G009800 | chr6A | 121713118 | 121713691 | 573 | False | 782.0 | 782 | 91.4780 | 3331 | 3897 | 1 | chr6A.!!$F1 | 566 |
23 | TraesCS2A01G009800 | chr4B | 637369062 | 637369631 | 569 | False | 761.0 | 761 | 90.9090 | 3331 | 3897 | 1 | chr4B.!!$F2 | 566 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
264 | 265 | 0.042131 | TCGGAGGGTTGGTATCACCT | 59.958 | 55.0 | 0.0 | 0.0 | 39.58 | 4.00 | F |
1850 | 2454 | 0.104855 | TATGAGGACGAGGCACATGC | 59.895 | 55.0 | 0.0 | 0.0 | 41.14 | 4.06 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1999 | 2603 | 0.181114 | CTTTCATGGATCCGCTCCCA | 59.819 | 55.0 | 7.39 | 0.0 | 44.23 | 4.37 | R |
2962 | 3574 | 0.320683 | CCCTCACGACATCTTGCACA | 60.321 | 55.0 | 0.00 | 0.0 | 0.00 | 4.57 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
25 | 26 | 8.568676 | TCCAAATTTGAAATATACACCGAGAA | 57.431 | 30.769 | 19.86 | 0.00 | 0.00 | 2.87 |
26 | 27 | 8.455682 | TCCAAATTTGAAATATACACCGAGAAC | 58.544 | 33.333 | 19.86 | 0.00 | 0.00 | 3.01 |
27 | 28 | 7.700656 | CCAAATTTGAAATATACACCGAGAACC | 59.299 | 37.037 | 19.86 | 0.00 | 0.00 | 3.62 |
28 | 29 | 7.931578 | AATTTGAAATATACACCGAGAACCA | 57.068 | 32.000 | 0.00 | 0.00 | 0.00 | 3.67 |
29 | 30 | 7.931578 | ATTTGAAATATACACCGAGAACCAA | 57.068 | 32.000 | 0.00 | 0.00 | 0.00 | 3.67 |
30 | 31 | 7.747155 | TTTGAAATATACACCGAGAACCAAA | 57.253 | 32.000 | 0.00 | 0.00 | 0.00 | 3.28 |
31 | 32 | 7.747155 | TTGAAATATACACCGAGAACCAAAA | 57.253 | 32.000 | 0.00 | 0.00 | 0.00 | 2.44 |
32 | 33 | 7.747155 | TGAAATATACACCGAGAACCAAAAA | 57.253 | 32.000 | 0.00 | 0.00 | 0.00 | 1.94 |
33 | 34 | 7.812648 | TGAAATATACACCGAGAACCAAAAAG | 58.187 | 34.615 | 0.00 | 0.00 | 0.00 | 2.27 |
34 | 35 | 6.753107 | AATATACACCGAGAACCAAAAAGG | 57.247 | 37.500 | 0.00 | 0.00 | 45.67 | 3.11 |
35 | 36 | 2.721425 | ACACCGAGAACCAAAAAGGA | 57.279 | 45.000 | 0.00 | 0.00 | 41.22 | 3.36 |
36 | 37 | 2.294979 | ACACCGAGAACCAAAAAGGAC | 58.705 | 47.619 | 0.00 | 0.00 | 41.22 | 3.85 |
37 | 38 | 2.294074 | CACCGAGAACCAAAAAGGACA | 58.706 | 47.619 | 0.00 | 0.00 | 41.22 | 4.02 |
38 | 39 | 2.685897 | CACCGAGAACCAAAAAGGACAA | 59.314 | 45.455 | 0.00 | 0.00 | 41.22 | 3.18 |
39 | 40 | 3.129638 | CACCGAGAACCAAAAAGGACAAA | 59.870 | 43.478 | 0.00 | 0.00 | 41.22 | 2.83 |
40 | 41 | 3.958147 | ACCGAGAACCAAAAAGGACAAAT | 59.042 | 39.130 | 0.00 | 0.00 | 41.22 | 2.32 |
41 | 42 | 4.037565 | ACCGAGAACCAAAAAGGACAAATC | 59.962 | 41.667 | 0.00 | 0.00 | 41.22 | 2.17 |
42 | 43 | 4.546570 | CGAGAACCAAAAAGGACAAATCC | 58.453 | 43.478 | 0.00 | 0.00 | 46.69 | 3.01 |
56 | 57 | 6.949352 | GGACAAATCCATGATGAATAGTGT | 57.051 | 37.500 | 0.00 | 0.00 | 45.47 | 3.55 |
57 | 58 | 6.963796 | GGACAAATCCATGATGAATAGTGTC | 58.036 | 40.000 | 0.00 | 0.00 | 45.47 | 3.67 |
58 | 59 | 6.543465 | GGACAAATCCATGATGAATAGTGTCA | 59.457 | 38.462 | 9.49 | 0.00 | 45.47 | 3.58 |
59 | 60 | 7.067372 | GGACAAATCCATGATGAATAGTGTCAA | 59.933 | 37.037 | 9.49 | 0.00 | 45.47 | 3.18 |
60 | 61 | 8.352137 | ACAAATCCATGATGAATAGTGTCAAA | 57.648 | 30.769 | 0.00 | 0.00 | 0.00 | 2.69 |
61 | 62 | 8.805175 | ACAAATCCATGATGAATAGTGTCAAAA | 58.195 | 29.630 | 0.00 | 0.00 | 0.00 | 2.44 |
62 | 63 | 9.297586 | CAAATCCATGATGAATAGTGTCAAAAG | 57.702 | 33.333 | 0.00 | 0.00 | 0.00 | 2.27 |
63 | 64 | 8.812513 | AATCCATGATGAATAGTGTCAAAAGA | 57.187 | 30.769 | 0.00 | 0.00 | 0.00 | 2.52 |
64 | 65 | 8.812513 | ATCCATGATGAATAGTGTCAAAAGAA | 57.187 | 30.769 | 0.00 | 0.00 | 0.00 | 2.52 |
65 | 66 | 8.272545 | TCCATGATGAATAGTGTCAAAAGAAG | 57.727 | 34.615 | 0.00 | 0.00 | 0.00 | 2.85 |
66 | 67 | 8.102676 | TCCATGATGAATAGTGTCAAAAGAAGA | 58.897 | 33.333 | 0.00 | 0.00 | 0.00 | 2.87 |
67 | 68 | 8.180267 | CCATGATGAATAGTGTCAAAAGAAGAC | 58.820 | 37.037 | 0.00 | 0.00 | 36.55 | 3.01 |
68 | 69 | 8.724229 | CATGATGAATAGTGTCAAAAGAAGACA | 58.276 | 33.333 | 0.00 | 0.00 | 43.23 | 3.41 |
69 | 70 | 8.675705 | TGATGAATAGTGTCAAAAGAAGACAA | 57.324 | 30.769 | 0.00 | 0.00 | 46.50 | 3.18 |
70 | 71 | 9.119418 | TGATGAATAGTGTCAAAAGAAGACAAA | 57.881 | 29.630 | 0.00 | 0.00 | 46.50 | 2.83 |
71 | 72 | 9.950680 | GATGAATAGTGTCAAAAGAAGACAAAA | 57.049 | 29.630 | 0.00 | 0.00 | 46.50 | 2.44 |
73 | 74 | 9.567848 | TGAATAGTGTCAAAAGAAGACAAAAAC | 57.432 | 29.630 | 0.00 | 0.00 | 46.50 | 2.43 |
74 | 75 | 9.567848 | GAATAGTGTCAAAAGAAGACAAAAACA | 57.432 | 29.630 | 0.00 | 0.00 | 46.50 | 2.83 |
75 | 76 | 9.921637 | AATAGTGTCAAAAGAAGACAAAAACAA | 57.078 | 25.926 | 0.00 | 0.00 | 46.50 | 2.83 |
76 | 77 | 9.921637 | ATAGTGTCAAAAGAAGACAAAAACAAA | 57.078 | 25.926 | 0.00 | 0.00 | 46.50 | 2.83 |
77 | 78 | 8.655651 | AGTGTCAAAAGAAGACAAAAACAAAA | 57.344 | 26.923 | 0.00 | 0.00 | 46.50 | 2.44 |
78 | 79 | 9.103861 | AGTGTCAAAAGAAGACAAAAACAAAAA | 57.896 | 25.926 | 0.00 | 0.00 | 46.50 | 1.94 |
79 | 80 | 9.877137 | GTGTCAAAAGAAGACAAAAACAAAAAT | 57.123 | 25.926 | 0.00 | 0.00 | 46.50 | 1.82 |
80 | 81 | 9.875675 | TGTCAAAAGAAGACAAAAACAAAAATG | 57.124 | 25.926 | 0.00 | 0.00 | 42.57 | 2.32 |
83 | 84 | 9.875675 | CAAAAGAAGACAAAAACAAAAATGACA | 57.124 | 25.926 | 0.00 | 0.00 | 0.00 | 3.58 |
84 | 85 | 9.877137 | AAAAGAAGACAAAAACAAAAATGACAC | 57.123 | 25.926 | 0.00 | 0.00 | 0.00 | 3.67 |
85 | 86 | 8.831715 | AAGAAGACAAAAACAAAAATGACACT | 57.168 | 26.923 | 0.00 | 0.00 | 0.00 | 3.55 |
86 | 87 | 9.921637 | AAGAAGACAAAAACAAAAATGACACTA | 57.078 | 25.926 | 0.00 | 0.00 | 0.00 | 2.74 |
90 | 91 | 9.868277 | AGACAAAAACAAAAATGACACTATTCA | 57.132 | 25.926 | 0.00 | 0.00 | 0.00 | 2.57 |
91 | 92 | 9.900264 | GACAAAAACAAAAATGACACTATTCAC | 57.100 | 29.630 | 0.00 | 0.00 | 0.00 | 3.18 |
92 | 93 | 9.429359 | ACAAAAACAAAAATGACACTATTCACA | 57.571 | 25.926 | 0.00 | 0.00 | 0.00 | 3.58 |
96 | 97 | 9.467258 | AAACAAAAATGACACTATTCACATCTG | 57.533 | 29.630 | 0.00 | 0.00 | 0.00 | 2.90 |
97 | 98 | 8.394971 | ACAAAAATGACACTATTCACATCTGA | 57.605 | 30.769 | 0.00 | 0.00 | 0.00 | 3.27 |
98 | 99 | 8.849168 | ACAAAAATGACACTATTCACATCTGAA | 58.151 | 29.630 | 0.00 | 0.00 | 40.77 | 3.02 |
99 | 100 | 9.850628 | CAAAAATGACACTATTCACATCTGAAT | 57.149 | 29.630 | 1.66 | 1.66 | 46.84 | 2.57 |
102 | 103 | 9.850628 | AAATGACACTATTCACATCTGAATTTG | 57.149 | 29.630 | 1.29 | 3.21 | 43.48 | 2.32 |
103 | 104 | 7.984422 | TGACACTATTCACATCTGAATTTGT | 57.016 | 32.000 | 1.29 | 6.05 | 43.48 | 2.83 |
104 | 105 | 8.032952 | TGACACTATTCACATCTGAATTTGTC | 57.967 | 34.615 | 20.04 | 20.04 | 43.48 | 3.18 |
105 | 106 | 7.984422 | ACACTATTCACATCTGAATTTGTCA | 57.016 | 32.000 | 1.29 | 0.00 | 43.48 | 3.58 |
106 | 107 | 8.571461 | ACACTATTCACATCTGAATTTGTCAT | 57.429 | 30.769 | 1.29 | 0.00 | 43.48 | 3.06 |
107 | 108 | 9.017509 | ACACTATTCACATCTGAATTTGTCATT | 57.982 | 29.630 | 1.29 | 0.00 | 43.48 | 2.57 |
108 | 109 | 9.850628 | CACTATTCACATCTGAATTTGTCATTT | 57.149 | 29.630 | 1.29 | 0.00 | 43.48 | 2.32 |
112 | 113 | 8.945481 | TTCACATCTGAATTTGTCATTTTTGT | 57.055 | 26.923 | 0.00 | 0.00 | 35.07 | 2.83 |
113 | 114 | 8.945481 | TCACATCTGAATTTGTCATTTTTGTT | 57.055 | 26.923 | 0.00 | 0.00 | 35.07 | 2.83 |
114 | 115 | 9.381033 | TCACATCTGAATTTGTCATTTTTGTTT | 57.619 | 25.926 | 0.00 | 0.00 | 35.07 | 2.83 |
115 | 116 | 9.640974 | CACATCTGAATTTGTCATTTTTGTTTC | 57.359 | 29.630 | 0.00 | 0.00 | 35.07 | 2.78 |
116 | 117 | 9.603921 | ACATCTGAATTTGTCATTTTTGTTTCT | 57.396 | 25.926 | 0.00 | 0.00 | 35.07 | 2.52 |
118 | 119 | 8.647143 | TCTGAATTTGTCATTTTTGTTTCTCC | 57.353 | 30.769 | 0.00 | 0.00 | 35.07 | 3.71 |
119 | 120 | 7.434897 | TCTGAATTTGTCATTTTTGTTTCTCCG | 59.565 | 33.333 | 0.00 | 0.00 | 35.07 | 4.63 |
120 | 121 | 7.038659 | TGAATTTGTCATTTTTGTTTCTCCGT | 58.961 | 30.769 | 0.00 | 0.00 | 0.00 | 4.69 |
121 | 122 | 6.826893 | ATTTGTCATTTTTGTTTCTCCGTG | 57.173 | 33.333 | 0.00 | 0.00 | 0.00 | 4.94 |
122 | 123 | 4.974368 | TGTCATTTTTGTTTCTCCGTGT | 57.026 | 36.364 | 0.00 | 0.00 | 0.00 | 4.49 |
123 | 124 | 4.667262 | TGTCATTTTTGTTTCTCCGTGTG | 58.333 | 39.130 | 0.00 | 0.00 | 0.00 | 3.82 |
124 | 125 | 4.156922 | TGTCATTTTTGTTTCTCCGTGTGT | 59.843 | 37.500 | 0.00 | 0.00 | 0.00 | 3.72 |
125 | 126 | 5.354513 | TGTCATTTTTGTTTCTCCGTGTGTA | 59.645 | 36.000 | 0.00 | 0.00 | 0.00 | 2.90 |
126 | 127 | 6.127980 | TGTCATTTTTGTTTCTCCGTGTGTAA | 60.128 | 34.615 | 0.00 | 0.00 | 0.00 | 2.41 |
127 | 128 | 6.915843 | GTCATTTTTGTTTCTCCGTGTGTAAT | 59.084 | 34.615 | 0.00 | 0.00 | 0.00 | 1.89 |
128 | 129 | 7.434013 | GTCATTTTTGTTTCTCCGTGTGTAATT | 59.566 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
129 | 130 | 7.646130 | TCATTTTTGTTTCTCCGTGTGTAATTC | 59.354 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
130 | 131 | 4.718858 | TTGTTTCTCCGTGTGTAATTCG | 57.281 | 40.909 | 0.00 | 0.00 | 0.00 | 3.34 |
131 | 132 | 3.719924 | TGTTTCTCCGTGTGTAATTCGT | 58.280 | 40.909 | 0.00 | 0.00 | 0.00 | 3.85 |
132 | 133 | 4.869215 | TGTTTCTCCGTGTGTAATTCGTA | 58.131 | 39.130 | 0.00 | 0.00 | 0.00 | 3.43 |
133 | 134 | 5.472148 | TGTTTCTCCGTGTGTAATTCGTAT | 58.528 | 37.500 | 0.00 | 0.00 | 0.00 | 3.06 |
134 | 135 | 5.927689 | TGTTTCTCCGTGTGTAATTCGTATT | 59.072 | 36.000 | 0.00 | 0.00 | 0.00 | 1.89 |
135 | 136 | 6.424509 | TGTTTCTCCGTGTGTAATTCGTATTT | 59.575 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
136 | 137 | 6.397831 | TTCTCCGTGTGTAATTCGTATTTG | 57.602 | 37.500 | 0.00 | 0.00 | 0.00 | 2.32 |
137 | 138 | 4.865925 | TCTCCGTGTGTAATTCGTATTTGG | 59.134 | 41.667 | 0.00 | 0.00 | 0.00 | 3.28 |
138 | 139 | 4.818642 | TCCGTGTGTAATTCGTATTTGGA | 58.181 | 39.130 | 0.00 | 0.00 | 0.00 | 3.53 |
139 | 140 | 5.421277 | TCCGTGTGTAATTCGTATTTGGAT | 58.579 | 37.500 | 0.00 | 0.00 | 0.00 | 3.41 |
140 | 141 | 5.521010 | TCCGTGTGTAATTCGTATTTGGATC | 59.479 | 40.000 | 0.00 | 0.00 | 0.00 | 3.36 |
141 | 142 | 5.522460 | CCGTGTGTAATTCGTATTTGGATCT | 59.478 | 40.000 | 0.00 | 0.00 | 0.00 | 2.75 |
142 | 143 | 6.410845 | CGTGTGTAATTCGTATTTGGATCTG | 58.589 | 40.000 | 0.00 | 0.00 | 0.00 | 2.90 |
143 | 144 | 6.254804 | CGTGTGTAATTCGTATTTGGATCTGA | 59.745 | 38.462 | 0.00 | 0.00 | 0.00 | 3.27 |
144 | 145 | 7.201487 | CGTGTGTAATTCGTATTTGGATCTGAA | 60.201 | 37.037 | 0.00 | 0.00 | 0.00 | 3.02 |
145 | 146 | 8.612619 | GTGTGTAATTCGTATTTGGATCTGAAT | 58.387 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
146 | 147 | 9.173021 | TGTGTAATTCGTATTTGGATCTGAATT | 57.827 | 29.630 | 0.00 | 3.82 | 38.92 | 2.17 |
153 | 154 | 8.220755 | TCGTATTTGGATCTGAATTTTTAGGG | 57.779 | 34.615 | 0.00 | 0.00 | 0.00 | 3.53 |
154 | 155 | 7.284489 | TCGTATTTGGATCTGAATTTTTAGGGG | 59.716 | 37.037 | 0.00 | 0.00 | 0.00 | 4.79 |
155 | 156 | 7.068226 | CGTATTTGGATCTGAATTTTTAGGGGT | 59.932 | 37.037 | 0.00 | 0.00 | 0.00 | 4.95 |
156 | 157 | 7.813087 | ATTTGGATCTGAATTTTTAGGGGTT | 57.187 | 32.000 | 0.00 | 0.00 | 0.00 | 4.11 |
157 | 158 | 6.603940 | TTGGATCTGAATTTTTAGGGGTTG | 57.396 | 37.500 | 0.00 | 0.00 | 0.00 | 3.77 |
158 | 159 | 5.650283 | TGGATCTGAATTTTTAGGGGTTGT | 58.350 | 37.500 | 0.00 | 0.00 | 0.00 | 3.32 |
159 | 160 | 5.714806 | TGGATCTGAATTTTTAGGGGTTGTC | 59.285 | 40.000 | 0.00 | 0.00 | 0.00 | 3.18 |
160 | 161 | 5.163652 | GGATCTGAATTTTTAGGGGTTGTCG | 60.164 | 44.000 | 0.00 | 0.00 | 0.00 | 4.35 |
161 | 162 | 4.975631 | TCTGAATTTTTAGGGGTTGTCGA | 58.024 | 39.130 | 0.00 | 0.00 | 0.00 | 4.20 |
162 | 163 | 4.758165 | TCTGAATTTTTAGGGGTTGTCGAC | 59.242 | 41.667 | 9.11 | 9.11 | 0.00 | 4.20 |
163 | 164 | 4.462133 | TGAATTTTTAGGGGTTGTCGACA | 58.538 | 39.130 | 15.76 | 15.76 | 0.00 | 4.35 |
164 | 165 | 5.074115 | TGAATTTTTAGGGGTTGTCGACAT | 58.926 | 37.500 | 20.80 | 6.45 | 0.00 | 3.06 |
165 | 166 | 6.239396 | TGAATTTTTAGGGGTTGTCGACATA | 58.761 | 36.000 | 20.80 | 5.32 | 0.00 | 2.29 |
166 | 167 | 6.715718 | TGAATTTTTAGGGGTTGTCGACATAA | 59.284 | 34.615 | 20.80 | 11.61 | 0.00 | 1.90 |
167 | 168 | 6.753107 | ATTTTTAGGGGTTGTCGACATAAG | 57.247 | 37.500 | 20.80 | 0.00 | 0.00 | 1.73 |
168 | 169 | 4.895668 | TTTAGGGGTTGTCGACATAAGT | 57.104 | 40.909 | 20.80 | 6.15 | 0.00 | 2.24 |
169 | 170 | 2.762535 | AGGGGTTGTCGACATAAGTG | 57.237 | 50.000 | 20.80 | 0.00 | 0.00 | 3.16 |
170 | 171 | 1.975680 | AGGGGTTGTCGACATAAGTGT | 59.024 | 47.619 | 20.80 | 0.00 | 42.49 | 3.55 |
171 | 172 | 3.167485 | AGGGGTTGTCGACATAAGTGTA | 58.833 | 45.455 | 20.80 | 0.00 | 39.09 | 2.90 |
172 | 173 | 3.773119 | AGGGGTTGTCGACATAAGTGTAT | 59.227 | 43.478 | 20.80 | 0.00 | 39.09 | 2.29 |
173 | 174 | 4.224370 | AGGGGTTGTCGACATAAGTGTATT | 59.776 | 41.667 | 20.80 | 0.00 | 39.09 | 1.89 |
174 | 175 | 4.939439 | GGGGTTGTCGACATAAGTGTATTT | 59.061 | 41.667 | 20.80 | 0.00 | 39.09 | 1.40 |
175 | 176 | 5.163794 | GGGGTTGTCGACATAAGTGTATTTG | 60.164 | 44.000 | 20.80 | 0.00 | 39.09 | 2.32 |
176 | 177 | 5.163794 | GGGTTGTCGACATAAGTGTATTTGG | 60.164 | 44.000 | 20.80 | 0.00 | 39.09 | 3.28 |
177 | 178 | 5.640357 | GGTTGTCGACATAAGTGTATTTGGA | 59.360 | 40.000 | 20.80 | 0.00 | 39.09 | 3.53 |
178 | 179 | 6.315393 | GGTTGTCGACATAAGTGTATTTGGAT | 59.685 | 38.462 | 20.80 | 0.00 | 39.09 | 3.41 |
179 | 180 | 7.399523 | GTTGTCGACATAAGTGTATTTGGATC | 58.600 | 38.462 | 20.80 | 0.00 | 39.09 | 3.36 |
180 | 181 | 6.635755 | TGTCGACATAAGTGTATTTGGATCA | 58.364 | 36.000 | 15.76 | 0.00 | 39.09 | 2.92 |
181 | 182 | 7.100409 | TGTCGACATAAGTGTATTTGGATCAA | 58.900 | 34.615 | 15.76 | 0.00 | 39.09 | 2.57 |
182 | 183 | 7.768582 | TGTCGACATAAGTGTATTTGGATCAAT | 59.231 | 33.333 | 15.76 | 0.00 | 39.09 | 2.57 |
183 | 184 | 8.612619 | GTCGACATAAGTGTATTTGGATCAATT | 58.387 | 33.333 | 11.55 | 0.00 | 39.09 | 2.32 |
184 | 185 | 9.173021 | TCGACATAAGTGTATTTGGATCAATTT | 57.827 | 29.630 | 0.00 | 0.00 | 39.09 | 1.82 |
185 | 186 | 9.787532 | CGACATAAGTGTATTTGGATCAATTTT | 57.212 | 29.630 | 0.00 | 0.00 | 39.09 | 1.82 |
243 | 244 | 6.753107 | TTTTTAAGTTGGTAGCATAGGAGC | 57.247 | 37.500 | 0.00 | 0.00 | 0.00 | 4.70 |
244 | 245 | 5.429681 | TTTAAGTTGGTAGCATAGGAGCA | 57.570 | 39.130 | 0.00 | 0.00 | 36.85 | 4.26 |
245 | 246 | 5.630415 | TTAAGTTGGTAGCATAGGAGCAT | 57.370 | 39.130 | 0.00 | 0.00 | 36.85 | 3.79 |
246 | 247 | 3.760580 | AGTTGGTAGCATAGGAGCATC | 57.239 | 47.619 | 0.00 | 0.00 | 36.85 | 3.91 |
247 | 248 | 2.036475 | AGTTGGTAGCATAGGAGCATCG | 59.964 | 50.000 | 0.00 | 0.00 | 36.85 | 3.84 |
248 | 249 | 0.969149 | TGGTAGCATAGGAGCATCGG | 59.031 | 55.000 | 0.00 | 0.00 | 36.85 | 4.18 |
249 | 250 | 1.257743 | GGTAGCATAGGAGCATCGGA | 58.742 | 55.000 | 0.00 | 0.00 | 36.85 | 4.55 |
250 | 251 | 1.203523 | GGTAGCATAGGAGCATCGGAG | 59.796 | 57.143 | 0.00 | 0.00 | 36.85 | 4.63 |
251 | 252 | 1.203523 | GTAGCATAGGAGCATCGGAGG | 59.796 | 57.143 | 0.00 | 0.00 | 36.85 | 4.30 |
252 | 253 | 1.190833 | AGCATAGGAGCATCGGAGGG | 61.191 | 60.000 | 0.00 | 0.00 | 36.85 | 4.30 |
253 | 254 | 1.476007 | GCATAGGAGCATCGGAGGGT | 61.476 | 60.000 | 0.00 | 0.00 | 34.37 | 4.34 |
254 | 255 | 1.051812 | CATAGGAGCATCGGAGGGTT | 58.948 | 55.000 | 0.00 | 0.00 | 34.37 | 4.11 |
255 | 256 | 1.051812 | ATAGGAGCATCGGAGGGTTG | 58.948 | 55.000 | 0.00 | 0.00 | 34.37 | 3.77 |
256 | 257 | 1.048724 | TAGGAGCATCGGAGGGTTGG | 61.049 | 60.000 | 0.00 | 0.00 | 34.37 | 3.77 |
257 | 258 | 2.670148 | GGAGCATCGGAGGGTTGGT | 61.670 | 63.158 | 0.00 | 0.00 | 34.37 | 3.67 |
258 | 259 | 1.335132 | GGAGCATCGGAGGGTTGGTA | 61.335 | 60.000 | 0.00 | 0.00 | 34.37 | 3.25 |
259 | 260 | 0.759346 | GAGCATCGGAGGGTTGGTAT | 59.241 | 55.000 | 0.00 | 0.00 | 0.00 | 2.73 |
260 | 261 | 0.759346 | AGCATCGGAGGGTTGGTATC | 59.241 | 55.000 | 0.00 | 0.00 | 0.00 | 2.24 |
261 | 262 | 0.468226 | GCATCGGAGGGTTGGTATCA | 59.532 | 55.000 | 0.00 | 0.00 | 0.00 | 2.15 |
262 | 263 | 1.810412 | GCATCGGAGGGTTGGTATCAC | 60.810 | 57.143 | 0.00 | 0.00 | 0.00 | 3.06 |
263 | 264 | 1.129058 | ATCGGAGGGTTGGTATCACC | 58.871 | 55.000 | 0.00 | 0.00 | 39.22 | 4.02 |
264 | 265 | 0.042131 | TCGGAGGGTTGGTATCACCT | 59.958 | 55.000 | 0.00 | 0.00 | 39.58 | 4.00 |
265 | 266 | 1.288633 | TCGGAGGGTTGGTATCACCTA | 59.711 | 52.381 | 0.00 | 0.00 | 39.58 | 3.08 |
266 | 267 | 2.112998 | CGGAGGGTTGGTATCACCTAA | 58.887 | 52.381 | 0.00 | 0.00 | 39.58 | 2.69 |
267 | 268 | 2.704065 | CGGAGGGTTGGTATCACCTAAT | 59.296 | 50.000 | 0.00 | 0.00 | 39.58 | 1.73 |
268 | 269 | 3.899360 | CGGAGGGTTGGTATCACCTAATA | 59.101 | 47.826 | 0.00 | 0.00 | 39.58 | 0.98 |
269 | 270 | 4.262335 | CGGAGGGTTGGTATCACCTAATAC | 60.262 | 50.000 | 0.00 | 0.00 | 39.58 | 1.89 |
270 | 271 | 4.906060 | GGAGGGTTGGTATCACCTAATACT | 59.094 | 45.833 | 0.00 | 0.00 | 39.58 | 2.12 |
271 | 272 | 5.368816 | GGAGGGTTGGTATCACCTAATACTT | 59.631 | 44.000 | 0.00 | 0.00 | 39.58 | 2.24 |
272 | 273 | 6.126565 | GGAGGGTTGGTATCACCTAATACTTT | 60.127 | 42.308 | 0.00 | 0.00 | 39.58 | 2.66 |
273 | 274 | 6.896883 | AGGGTTGGTATCACCTAATACTTTC | 58.103 | 40.000 | 0.00 | 0.00 | 39.58 | 2.62 |
274 | 275 | 6.060136 | GGGTTGGTATCACCTAATACTTTCC | 58.940 | 44.000 | 0.00 | 0.00 | 39.58 | 3.13 |
275 | 276 | 6.060136 | GGTTGGTATCACCTAATACTTTCCC | 58.940 | 44.000 | 0.00 | 0.00 | 39.58 | 3.97 |
276 | 277 | 6.353255 | GGTTGGTATCACCTAATACTTTCCCA | 60.353 | 42.308 | 0.00 | 0.00 | 39.58 | 4.37 |
277 | 278 | 7.287810 | GTTGGTATCACCTAATACTTTCCCAT | 58.712 | 38.462 | 0.00 | 0.00 | 39.58 | 4.00 |
278 | 279 | 7.074653 | TGGTATCACCTAATACTTTCCCATC | 57.925 | 40.000 | 0.00 | 0.00 | 39.58 | 3.51 |
279 | 280 | 6.849697 | TGGTATCACCTAATACTTTCCCATCT | 59.150 | 38.462 | 0.00 | 0.00 | 39.58 | 2.90 |
280 | 281 | 7.016268 | TGGTATCACCTAATACTTTCCCATCTC | 59.984 | 40.741 | 0.00 | 0.00 | 39.58 | 2.75 |
281 | 282 | 5.888982 | TCACCTAATACTTTCCCATCTCC | 57.111 | 43.478 | 0.00 | 0.00 | 0.00 | 3.71 |
282 | 283 | 4.344102 | TCACCTAATACTTTCCCATCTCCG | 59.656 | 45.833 | 0.00 | 0.00 | 0.00 | 4.63 |
283 | 284 | 3.646637 | ACCTAATACTTTCCCATCTCCGG | 59.353 | 47.826 | 0.00 | 0.00 | 0.00 | 5.14 |
284 | 285 | 3.646637 | CCTAATACTTTCCCATCTCCGGT | 59.353 | 47.826 | 0.00 | 0.00 | 0.00 | 5.28 |
285 | 286 | 4.836736 | CCTAATACTTTCCCATCTCCGGTA | 59.163 | 45.833 | 0.00 | 0.00 | 0.00 | 4.02 |
286 | 287 | 4.684484 | AATACTTTCCCATCTCCGGTAC | 57.316 | 45.455 | 0.00 | 0.00 | 0.00 | 3.34 |
301 | 302 | 2.693267 | GGTACGCTCCTGGAAGAATT | 57.307 | 50.000 | 0.00 | 0.00 | 34.07 | 2.17 |
302 | 303 | 2.280628 | GGTACGCTCCTGGAAGAATTG | 58.719 | 52.381 | 0.00 | 0.00 | 34.07 | 2.32 |
303 | 304 | 2.093658 | GGTACGCTCCTGGAAGAATTGA | 60.094 | 50.000 | 0.00 | 0.00 | 34.07 | 2.57 |
304 | 305 | 2.393271 | ACGCTCCTGGAAGAATTGAG | 57.607 | 50.000 | 0.00 | 0.00 | 34.07 | 3.02 |
305 | 306 | 1.902508 | ACGCTCCTGGAAGAATTGAGA | 59.097 | 47.619 | 0.00 | 0.00 | 34.07 | 3.27 |
306 | 307 | 2.275318 | CGCTCCTGGAAGAATTGAGAC | 58.725 | 52.381 | 0.00 | 0.00 | 34.07 | 3.36 |
311 | 312 | 3.394274 | TCCTGGAAGAATTGAGACACCAA | 59.606 | 43.478 | 0.00 | 0.00 | 34.07 | 3.67 |
317 | 318 | 5.505173 | AAGAATTGAGACACCAAACACTG | 57.495 | 39.130 | 0.00 | 0.00 | 0.00 | 3.66 |
374 | 376 | 2.503356 | GGAAGAGAGAATGGCTCCAGAA | 59.497 | 50.000 | 0.00 | 0.00 | 45.10 | 3.02 |
485 | 495 | 8.539544 | TGGAATCTCATTCATTCAGTACTGTTA | 58.460 | 33.333 | 21.99 | 12.12 | 41.03 | 2.41 |
486 | 496 | 9.553064 | GGAATCTCATTCATTCAGTACTGTTAT | 57.447 | 33.333 | 21.99 | 13.76 | 41.03 | 1.89 |
650 | 772 | 8.997323 | ACAAATTGACAGTGAAAGAAGAGATAG | 58.003 | 33.333 | 0.00 | 0.00 | 0.00 | 2.08 |
980 | 1574 | 3.765511 | TCCCCGGATGTCCTATAAATACG | 59.234 | 47.826 | 0.73 | 0.00 | 0.00 | 3.06 |
982 | 1576 | 3.194968 | CCCGGATGTCCTATAAATACGCT | 59.805 | 47.826 | 0.73 | 0.00 | 0.00 | 5.07 |
983 | 1577 | 4.400251 | CCCGGATGTCCTATAAATACGCTA | 59.600 | 45.833 | 0.73 | 0.00 | 0.00 | 4.26 |
984 | 1578 | 5.338365 | CCGGATGTCCTATAAATACGCTAC | 58.662 | 45.833 | 0.00 | 0.00 | 0.00 | 3.58 |
987 | 1582 | 6.349115 | CGGATGTCCTATAAATACGCTACAGT | 60.349 | 42.308 | 0.00 | 0.00 | 0.00 | 3.55 |
998 | 1593 | 6.476243 | AATACGCTACAGTTAACCAAGTTG | 57.524 | 37.500 | 0.88 | 0.00 | 0.00 | 3.16 |
1024 | 1621 | 0.671781 | CCAAGCAGGAGTGTCTTCGG | 60.672 | 60.000 | 0.00 | 0.00 | 41.22 | 4.30 |
1065 | 1662 | 2.620627 | CCTTTGTCACCCCCAACCTATC | 60.621 | 54.545 | 0.00 | 0.00 | 0.00 | 2.08 |
1066 | 1663 | 2.053747 | TTGTCACCCCCAACCTATCT | 57.946 | 50.000 | 0.00 | 0.00 | 0.00 | 1.98 |
1067 | 1664 | 2.953093 | TGTCACCCCCAACCTATCTA | 57.047 | 50.000 | 0.00 | 0.00 | 0.00 | 1.98 |
1068 | 1665 | 2.474112 | TGTCACCCCCAACCTATCTAC | 58.526 | 52.381 | 0.00 | 0.00 | 0.00 | 2.59 |
1077 | 1674 | 4.532521 | CCCCAACCTATCTACCTATTCCAG | 59.467 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
1108 | 1705 | 9.547279 | TTCCATCTATTCTAGTCCATATAGCAA | 57.453 | 33.333 | 0.00 | 0.00 | 0.00 | 3.91 |
1112 | 1709 | 8.958060 | TCTATTCTAGTCCATATAGCAACCTT | 57.042 | 34.615 | 0.00 | 0.00 | 0.00 | 3.50 |
1113 | 1710 | 9.026121 | TCTATTCTAGTCCATATAGCAACCTTC | 57.974 | 37.037 | 0.00 | 0.00 | 0.00 | 3.46 |
1114 | 1711 | 7.863901 | ATTCTAGTCCATATAGCAACCTTCT | 57.136 | 36.000 | 0.00 | 0.00 | 0.00 | 2.85 |
1115 | 1712 | 7.676683 | TTCTAGTCCATATAGCAACCTTCTT | 57.323 | 36.000 | 0.00 | 0.00 | 0.00 | 2.52 |
1116 | 1713 | 7.676683 | TCTAGTCCATATAGCAACCTTCTTT | 57.323 | 36.000 | 0.00 | 0.00 | 0.00 | 2.52 |
1117 | 1714 | 8.090788 | TCTAGTCCATATAGCAACCTTCTTTT | 57.909 | 34.615 | 0.00 | 0.00 | 0.00 | 2.27 |
1118 | 1715 | 8.548877 | TCTAGTCCATATAGCAACCTTCTTTTT | 58.451 | 33.333 | 0.00 | 0.00 | 0.00 | 1.94 |
1175 | 1773 | 4.575236 | CAGCTCATGCAATATGACTCTTGT | 59.425 | 41.667 | 0.00 | 0.00 | 42.74 | 3.16 |
1176 | 1774 | 5.066117 | CAGCTCATGCAATATGACTCTTGTT | 59.934 | 40.000 | 0.00 | 0.00 | 42.74 | 2.83 |
1177 | 1775 | 5.066117 | AGCTCATGCAATATGACTCTTGTTG | 59.934 | 40.000 | 0.00 | 0.00 | 42.74 | 3.33 |
1187 | 1785 | 0.756903 | ACTCTTGTTGGTACGCTGGT | 59.243 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
1188 | 1786 | 1.140252 | ACTCTTGTTGGTACGCTGGTT | 59.860 | 47.619 | 0.00 | 0.00 | 0.00 | 3.67 |
1189 | 1787 | 2.366266 | ACTCTTGTTGGTACGCTGGTTA | 59.634 | 45.455 | 0.00 | 0.00 | 0.00 | 2.85 |
1190 | 1788 | 3.007614 | ACTCTTGTTGGTACGCTGGTTAT | 59.992 | 43.478 | 0.00 | 0.00 | 0.00 | 1.89 |
1191 | 1789 | 4.221262 | ACTCTTGTTGGTACGCTGGTTATA | 59.779 | 41.667 | 0.00 | 0.00 | 0.00 | 0.98 |
1192 | 1790 | 5.149973 | TCTTGTTGGTACGCTGGTTATAA | 57.850 | 39.130 | 0.00 | 0.00 | 0.00 | 0.98 |
1232 | 1836 | 8.633075 | TTGCTGTTGTATTTTCTCAGAAAAAG | 57.367 | 30.769 | 16.52 | 9.26 | 32.04 | 2.27 |
1255 | 1859 | 4.651778 | CAAAAGAGTGGTATTGTCCCAGA | 58.348 | 43.478 | 0.00 | 0.00 | 31.13 | 3.86 |
1258 | 1862 | 2.840651 | AGAGTGGTATTGTCCCAGAAGG | 59.159 | 50.000 | 0.00 | 0.00 | 31.13 | 3.46 |
1452 | 2056 | 1.139654 | GTGACATGCCCAGAGATAGCA | 59.860 | 52.381 | 0.00 | 0.00 | 41.50 | 3.49 |
1690 | 2294 | 3.619233 | ACATTAACAACACCGCTTGTC | 57.381 | 42.857 | 0.00 | 0.00 | 37.51 | 3.18 |
1693 | 2297 | 3.889196 | TTAACAACACCGCTTGTCATC | 57.111 | 42.857 | 0.00 | 0.00 | 37.51 | 2.92 |
1815 | 2419 | 1.290955 | CAACCTACCGGCTTCGTCA | 59.709 | 57.895 | 0.00 | 0.00 | 0.00 | 4.35 |
1839 | 2443 | 1.366319 | ATGGGCCTGGATATGAGGAC | 58.634 | 55.000 | 4.53 | 0.00 | 37.99 | 3.85 |
1850 | 2454 | 0.104855 | TATGAGGACGAGGCACATGC | 59.895 | 55.000 | 0.00 | 0.00 | 41.14 | 4.06 |
1851 | 2455 | 2.887568 | GAGGACGAGGCACATGCG | 60.888 | 66.667 | 0.00 | 0.00 | 43.26 | 4.73 |
1863 | 2467 | 2.268076 | ACATGCGGCCGCTCTTTTT | 61.268 | 52.632 | 45.79 | 23.80 | 42.51 | 1.94 |
1865 | 2469 | 0.170116 | CATGCGGCCGCTCTTTTTAA | 59.830 | 50.000 | 45.79 | 27.14 | 42.51 | 1.52 |
2142 | 2746 | 6.307155 | CCTACAAGAAATAAGAGCACAAACG | 58.693 | 40.000 | 0.00 | 0.00 | 0.00 | 3.60 |
2271 | 2879 | 5.994887 | TTATTTATTCCAACATCGACCGG | 57.005 | 39.130 | 0.00 | 0.00 | 0.00 | 5.28 |
2348 | 2956 | 1.066152 | CTCGCCGAGATGATGAACAGA | 59.934 | 52.381 | 8.82 | 0.00 | 0.00 | 3.41 |
2391 | 2999 | 3.401577 | GATGAACTCGACGCTGTCA | 57.598 | 52.632 | 8.91 | 0.00 | 32.09 | 3.58 |
2637 | 3245 | 1.205893 | AGTTTCGTCCTGAGAGGCATC | 59.794 | 52.381 | 0.00 | 0.00 | 34.61 | 3.91 |
2803 | 3411 | 2.502213 | AAACCTGCAGGCGTTAAAAC | 57.498 | 45.000 | 33.06 | 0.00 | 39.32 | 2.43 |
2820 | 3428 | 7.330208 | GCGTTAAAACTATCAGTCTACAGGAAA | 59.670 | 37.037 | 0.00 | 0.00 | 0.00 | 3.13 |
2873 | 3481 | 0.102120 | TTTTGCAAGCTCAACCACGG | 59.898 | 50.000 | 0.00 | 0.00 | 0.00 | 4.94 |
2874 | 3482 | 2.348605 | TTTGCAAGCTCAACCACGGC | 62.349 | 55.000 | 0.00 | 0.00 | 0.00 | 5.68 |
2893 | 3501 | 2.231478 | GGCTGGCTGCGTATCTCTATAA | 59.769 | 50.000 | 10.35 | 0.00 | 44.05 | 0.98 |
2963 | 3575 | 9.667107 | ATTGGTAATATTATCCGGAACTATGTG | 57.333 | 33.333 | 9.01 | 0.00 | 0.00 | 3.21 |
2964 | 3576 | 8.197592 | TGGTAATATTATCCGGAACTATGTGT | 57.802 | 34.615 | 9.01 | 0.00 | 0.00 | 3.72 |
2965 | 3577 | 8.092068 | TGGTAATATTATCCGGAACTATGTGTG | 58.908 | 37.037 | 9.01 | 0.00 | 0.00 | 3.82 |
2966 | 3578 | 7.064253 | GGTAATATTATCCGGAACTATGTGTGC | 59.936 | 40.741 | 9.01 | 0.00 | 0.00 | 4.57 |
2967 | 3579 | 3.897141 | TTATCCGGAACTATGTGTGCA | 57.103 | 42.857 | 9.01 | 0.00 | 0.00 | 4.57 |
2968 | 3580 | 2.779755 | ATCCGGAACTATGTGTGCAA | 57.220 | 45.000 | 9.01 | 0.00 | 0.00 | 4.08 |
2969 | 3581 | 2.093306 | TCCGGAACTATGTGTGCAAG | 57.907 | 50.000 | 0.00 | 0.00 | 0.00 | 4.01 |
2970 | 3582 | 1.621317 | TCCGGAACTATGTGTGCAAGA | 59.379 | 47.619 | 0.00 | 0.00 | 0.00 | 3.02 |
2971 | 3583 | 2.236146 | TCCGGAACTATGTGTGCAAGAT | 59.764 | 45.455 | 0.00 | 0.00 | 0.00 | 2.40 |
2972 | 3584 | 2.352651 | CCGGAACTATGTGTGCAAGATG | 59.647 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
2973 | 3585 | 3.002791 | CGGAACTATGTGTGCAAGATGT | 58.997 | 45.455 | 0.00 | 0.00 | 0.00 | 3.06 |
2974 | 3586 | 3.062639 | CGGAACTATGTGTGCAAGATGTC | 59.937 | 47.826 | 0.00 | 0.00 | 0.00 | 3.06 |
2975 | 3587 | 3.062639 | GGAACTATGTGTGCAAGATGTCG | 59.937 | 47.826 | 0.00 | 0.00 | 0.00 | 4.35 |
2978 | 3590 | 2.168326 | ATGTGTGCAAGATGTCGTGA | 57.832 | 45.000 | 0.00 | 0.00 | 0.00 | 4.35 |
2989 | 3601 | 3.195698 | GTCGTGAGGGCGGCATTC | 61.196 | 66.667 | 12.47 | 8.60 | 36.38 | 2.67 |
2993 | 3605 | 1.675641 | GTGAGGGCGGCATTCAGTT | 60.676 | 57.895 | 12.47 | 0.00 | 0.00 | 3.16 |
3002 | 3614 | 1.666888 | CGGCATTCAGTTCTTGGCAAC | 60.667 | 52.381 | 0.00 | 0.00 | 35.82 | 4.17 |
3020 | 3636 | 5.991606 | TGGCAACATACTAGATACTGCATTC | 59.008 | 40.000 | 0.00 | 0.00 | 46.17 | 2.67 |
3041 | 3657 | 5.734855 | TCTGCGCTAATAAAGGAACAATC | 57.265 | 39.130 | 9.73 | 0.00 | 0.00 | 2.67 |
3042 | 3658 | 4.574828 | TCTGCGCTAATAAAGGAACAATCC | 59.425 | 41.667 | 9.73 | 0.00 | 46.98 | 3.01 |
3086 | 3702 | 5.858381 | TGTAACTAGGAGGATGATTGATGC | 58.142 | 41.667 | 0.00 | 0.00 | 0.00 | 3.91 |
3087 | 3703 | 5.604231 | TGTAACTAGGAGGATGATTGATGCT | 59.396 | 40.000 | 0.00 | 0.00 | 34.93 | 3.79 |
3088 | 3704 | 6.782494 | TGTAACTAGGAGGATGATTGATGCTA | 59.218 | 38.462 | 0.00 | 0.00 | 31.70 | 3.49 |
3089 | 3705 | 6.753913 | AACTAGGAGGATGATTGATGCTAA | 57.246 | 37.500 | 0.00 | 0.00 | 31.70 | 3.09 |
3090 | 3706 | 6.753913 | ACTAGGAGGATGATTGATGCTAAA | 57.246 | 37.500 | 0.00 | 0.00 | 31.70 | 1.85 |
3091 | 3707 | 7.141758 | ACTAGGAGGATGATTGATGCTAAAA | 57.858 | 36.000 | 0.00 | 0.00 | 31.70 | 1.52 |
3092 | 3708 | 7.753630 | ACTAGGAGGATGATTGATGCTAAAAT | 58.246 | 34.615 | 0.00 | 0.00 | 31.70 | 1.82 |
3093 | 3709 | 8.884323 | ACTAGGAGGATGATTGATGCTAAAATA | 58.116 | 33.333 | 0.00 | 0.00 | 31.70 | 1.40 |
3094 | 3710 | 9.730705 | CTAGGAGGATGATTGATGCTAAAATAA | 57.269 | 33.333 | 0.00 | 0.00 | 31.70 | 1.40 |
3096 | 3712 | 9.425248 | AGGAGGATGATTGATGCTAAAATAAAA | 57.575 | 29.630 | 0.00 | 0.00 | 31.70 | 1.52 |
3124 | 3740 | 2.678471 | GCCATGGCAGCATTTTTAGT | 57.322 | 45.000 | 32.08 | 0.00 | 41.49 | 2.24 |
3125 | 3741 | 2.976589 | GCCATGGCAGCATTTTTAGTT | 58.023 | 42.857 | 32.08 | 0.00 | 41.49 | 2.24 |
3126 | 3742 | 2.674357 | GCCATGGCAGCATTTTTAGTTG | 59.326 | 45.455 | 32.08 | 0.00 | 41.49 | 3.16 |
3127 | 3743 | 2.674357 | CCATGGCAGCATTTTTAGTTGC | 59.326 | 45.455 | 0.00 | 0.00 | 41.68 | 4.17 |
3130 | 3746 | 2.064573 | GCAGCATTTTTAGTTGCCGT | 57.935 | 45.000 | 0.00 | 0.00 | 39.72 | 5.68 |
3131 | 3747 | 2.403259 | GCAGCATTTTTAGTTGCCGTT | 58.597 | 42.857 | 0.00 | 0.00 | 39.72 | 4.44 |
3132 | 3748 | 2.155539 | GCAGCATTTTTAGTTGCCGTTG | 59.844 | 45.455 | 0.00 | 0.00 | 39.72 | 4.10 |
3133 | 3749 | 3.380142 | CAGCATTTTTAGTTGCCGTTGT | 58.620 | 40.909 | 0.00 | 0.00 | 39.72 | 3.32 |
3134 | 3750 | 4.541779 | CAGCATTTTTAGTTGCCGTTGTA | 58.458 | 39.130 | 0.00 | 0.00 | 39.72 | 2.41 |
3135 | 3751 | 4.979197 | CAGCATTTTTAGTTGCCGTTGTAA | 59.021 | 37.500 | 0.00 | 0.00 | 39.72 | 2.41 |
3136 | 3752 | 4.979815 | AGCATTTTTAGTTGCCGTTGTAAC | 59.020 | 37.500 | 0.00 | 0.00 | 39.72 | 2.50 |
3138 | 3754 | 5.460748 | GCATTTTTAGTTGCCGTTGTAACTT | 59.539 | 36.000 | 1.53 | 0.00 | 43.79 | 2.66 |
3139 | 3755 | 6.019398 | GCATTTTTAGTTGCCGTTGTAACTTT | 60.019 | 34.615 | 1.53 | 0.00 | 43.79 | 2.66 |
3140 | 3756 | 7.464844 | GCATTTTTAGTTGCCGTTGTAACTTTT | 60.465 | 33.333 | 1.53 | 0.00 | 43.79 | 2.27 |
3141 | 3757 | 7.886405 | TTTTTAGTTGCCGTTGTAACTTTTT | 57.114 | 28.000 | 1.53 | 0.00 | 43.79 | 1.94 |
3185 | 3801 | 7.612065 | AGTACCCTAATGTCATAATAGCACA | 57.388 | 36.000 | 0.00 | 0.00 | 0.00 | 4.57 |
3186 | 3802 | 8.207350 | AGTACCCTAATGTCATAATAGCACAT | 57.793 | 34.615 | 0.00 | 0.00 | 31.90 | 3.21 |
3187 | 3803 | 8.660435 | AGTACCCTAATGTCATAATAGCACATT | 58.340 | 33.333 | 0.00 | 0.00 | 42.20 | 2.71 |
3188 | 3804 | 9.284968 | GTACCCTAATGTCATAATAGCACATTT | 57.715 | 33.333 | 2.10 | 0.00 | 40.44 | 2.32 |
3189 | 3805 | 8.396272 | ACCCTAATGTCATAATAGCACATTTC | 57.604 | 34.615 | 2.10 | 0.00 | 40.44 | 2.17 |
3190 | 3806 | 7.998383 | ACCCTAATGTCATAATAGCACATTTCA | 59.002 | 33.333 | 2.10 | 0.00 | 40.44 | 2.69 |
3191 | 3807 | 8.849168 | CCCTAATGTCATAATAGCACATTTCAA | 58.151 | 33.333 | 2.10 | 0.00 | 40.44 | 2.69 |
3205 | 3821 | 7.940850 | AGCACATTTCAAATACACACTTTAGT | 58.059 | 30.769 | 0.00 | 0.00 | 0.00 | 2.24 |
3206 | 3822 | 9.062524 | AGCACATTTCAAATACACACTTTAGTA | 57.937 | 29.630 | 0.00 | 0.00 | 0.00 | 1.82 |
3207 | 3823 | 9.113876 | GCACATTTCAAATACACACTTTAGTAC | 57.886 | 33.333 | 0.00 | 0.00 | 0.00 | 2.73 |
3213 | 3829 | 9.991388 | TTCAAATACACACTTTAGTACAACAAC | 57.009 | 29.630 | 0.00 | 0.00 | 0.00 | 3.32 |
3214 | 3830 | 9.386010 | TCAAATACACACTTTAGTACAACAACT | 57.614 | 29.630 | 0.00 | 0.00 | 0.00 | 3.16 |
3215 | 3831 | 9.646336 | CAAATACACACTTTAGTACAACAACTC | 57.354 | 33.333 | 0.00 | 0.00 | 0.00 | 3.01 |
3216 | 3832 | 9.609346 | AAATACACACTTTAGTACAACAACTCT | 57.391 | 29.630 | 0.00 | 0.00 | 0.00 | 3.24 |
3217 | 3833 | 8.813643 | ATACACACTTTAGTACAACAACTCTC | 57.186 | 34.615 | 0.00 | 0.00 | 0.00 | 3.20 |
3218 | 3834 | 6.875076 | ACACACTTTAGTACAACAACTCTCT | 58.125 | 36.000 | 0.00 | 0.00 | 0.00 | 3.10 |
3219 | 3835 | 8.004087 | ACACACTTTAGTACAACAACTCTCTA | 57.996 | 34.615 | 0.00 | 0.00 | 0.00 | 2.43 |
3220 | 3836 | 8.472413 | ACACACTTTAGTACAACAACTCTCTAA | 58.528 | 33.333 | 0.00 | 0.00 | 0.00 | 2.10 |
3221 | 3837 | 9.477484 | CACACTTTAGTACAACAACTCTCTAAT | 57.523 | 33.333 | 0.00 | 0.00 | 0.00 | 1.73 |
3222 | 3838 | 9.477484 | ACACTTTAGTACAACAACTCTCTAATG | 57.523 | 33.333 | 0.00 | 0.00 | 0.00 | 1.90 |
3223 | 3839 | 9.477484 | CACTTTAGTACAACAACTCTCTAATGT | 57.523 | 33.333 | 0.00 | 0.00 | 0.00 | 2.71 |
3275 | 3891 | 8.801715 | AAGTGTATAATTGAAAGTGCTTTGTG | 57.198 | 30.769 | 1.51 | 0.00 | 32.11 | 3.33 |
3276 | 3892 | 7.940850 | AGTGTATAATTGAAAGTGCTTTGTGT | 58.059 | 30.769 | 1.51 | 0.00 | 32.11 | 3.72 |
3277 | 3893 | 7.862372 | AGTGTATAATTGAAAGTGCTTTGTGTG | 59.138 | 33.333 | 1.51 | 0.00 | 32.11 | 3.82 |
3278 | 3894 | 6.640499 | TGTATAATTGAAAGTGCTTTGTGTGC | 59.360 | 34.615 | 1.51 | 0.00 | 32.11 | 4.57 |
3279 | 3895 | 3.523606 | ATTGAAAGTGCTTTGTGTGCA | 57.476 | 38.095 | 1.51 | 0.00 | 38.19 | 4.57 |
3280 | 3896 | 3.523606 | TTGAAAGTGCTTTGTGTGCAT | 57.476 | 38.095 | 1.51 | 0.00 | 42.69 | 3.96 |
3281 | 3897 | 4.645762 | TTGAAAGTGCTTTGTGTGCATA | 57.354 | 36.364 | 1.51 | 0.00 | 42.69 | 3.14 |
3282 | 3898 | 4.852134 | TGAAAGTGCTTTGTGTGCATAT | 57.148 | 36.364 | 1.51 | 0.00 | 42.69 | 1.78 |
3283 | 3899 | 5.956068 | TGAAAGTGCTTTGTGTGCATATA | 57.044 | 34.783 | 1.51 | 0.00 | 42.69 | 0.86 |
3284 | 3900 | 6.513806 | TGAAAGTGCTTTGTGTGCATATAT | 57.486 | 33.333 | 1.51 | 0.00 | 42.69 | 0.86 |
3285 | 3901 | 7.622893 | TGAAAGTGCTTTGTGTGCATATATA | 57.377 | 32.000 | 1.51 | 0.00 | 42.69 | 0.86 |
3286 | 3902 | 7.471721 | TGAAAGTGCTTTGTGTGCATATATAC | 58.528 | 34.615 | 1.51 | 0.00 | 42.69 | 1.47 |
3287 | 3903 | 7.120432 | TGAAAGTGCTTTGTGTGCATATATACA | 59.880 | 33.333 | 1.51 | 0.00 | 42.69 | 2.29 |
3288 | 3904 | 7.389803 | AAGTGCTTTGTGTGCATATATACAA | 57.610 | 32.000 | 0.00 | 0.00 | 42.69 | 2.41 |
3289 | 3905 | 6.785191 | AGTGCTTTGTGTGCATATATACAAC | 58.215 | 36.000 | 0.00 | 0.00 | 42.69 | 3.32 |
3290 | 3906 | 6.374053 | AGTGCTTTGTGTGCATATATACAACA | 59.626 | 34.615 | 0.00 | 0.00 | 42.69 | 3.33 |
3291 | 3907 | 7.067372 | AGTGCTTTGTGTGCATATATACAACAT | 59.933 | 33.333 | 0.00 | 0.00 | 42.69 | 2.71 |
3292 | 3908 | 8.341903 | GTGCTTTGTGTGCATATATACAACATA | 58.658 | 33.333 | 0.00 | 0.00 | 42.69 | 2.29 |
3293 | 3909 | 9.065798 | TGCTTTGTGTGCATATATACAACATAT | 57.934 | 29.630 | 0.00 | 0.00 | 35.31 | 1.78 |
3320 | 3936 | 9.816354 | ATATTTAGTGCAACAACAACTCTTTTT | 57.184 | 25.926 | 0.00 | 0.00 | 41.43 | 1.94 |
3391 | 4008 | 6.096673 | ACAGGAACAGAAAAACAAAACAGT | 57.903 | 33.333 | 0.00 | 0.00 | 0.00 | 3.55 |
3505 | 4123 | 0.982852 | ATGAAGCCCTCCACCGATCA | 60.983 | 55.000 | 0.00 | 0.00 | 0.00 | 2.92 |
3586 | 4206 | 5.420725 | AGTAACACATTGTCAGCTCCATA | 57.579 | 39.130 | 0.00 | 0.00 | 0.00 | 2.74 |
3704 | 4329 | 3.749665 | CTCTCCCAAGAGCTAAGATGG | 57.250 | 52.381 | 0.00 | 0.00 | 42.54 | 3.51 |
3721 | 4346 | 1.605165 | GGGAAACCGCCACCATTGA | 60.605 | 57.895 | 0.00 | 0.00 | 43.64 | 2.57 |
3724 | 4349 | 0.887933 | GAAACCGCCACCATTGACAT | 59.112 | 50.000 | 0.00 | 0.00 | 0.00 | 3.06 |
3803 | 4428 | 1.005215 | CTGGGCACTGAGAGGGAATTT | 59.995 | 52.381 | 0.00 | 0.00 | 0.00 | 1.82 |
3816 | 4441 | 2.234908 | AGGGAATTTCACACGAGGAGAG | 59.765 | 50.000 | 0.73 | 0.00 | 0.00 | 3.20 |
3834 | 4461 | 2.099062 | GCAAATGCACGGCGAGAG | 59.901 | 61.111 | 16.62 | 3.87 | 41.59 | 3.20 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
0 | 1 | 8.455682 | GTTCTCGGTGTATATTTCAAATTTGGA | 58.544 | 33.333 | 17.90 | 6.72 | 0.00 | 3.53 |
1 | 2 | 7.700656 | GGTTCTCGGTGTATATTTCAAATTTGG | 59.299 | 37.037 | 17.90 | 0.12 | 0.00 | 3.28 |
2 | 3 | 8.240682 | TGGTTCTCGGTGTATATTTCAAATTTG | 58.759 | 33.333 | 12.15 | 12.15 | 0.00 | 2.32 |
3 | 4 | 8.343168 | TGGTTCTCGGTGTATATTTCAAATTT | 57.657 | 30.769 | 0.00 | 0.00 | 0.00 | 1.82 |
4 | 5 | 7.931578 | TGGTTCTCGGTGTATATTTCAAATT | 57.068 | 32.000 | 0.00 | 0.00 | 0.00 | 1.82 |
5 | 6 | 7.931578 | TTGGTTCTCGGTGTATATTTCAAAT | 57.068 | 32.000 | 0.00 | 0.00 | 0.00 | 2.32 |
6 | 7 | 7.747155 | TTTGGTTCTCGGTGTATATTTCAAA | 57.253 | 32.000 | 0.00 | 0.00 | 0.00 | 2.69 |
7 | 8 | 7.747155 | TTTTGGTTCTCGGTGTATATTTCAA | 57.253 | 32.000 | 0.00 | 0.00 | 0.00 | 2.69 |
8 | 9 | 7.094549 | CCTTTTTGGTTCTCGGTGTATATTTCA | 60.095 | 37.037 | 0.00 | 0.00 | 0.00 | 2.69 |
9 | 10 | 7.120138 | TCCTTTTTGGTTCTCGGTGTATATTTC | 59.880 | 37.037 | 0.00 | 0.00 | 37.07 | 2.17 |
10 | 11 | 6.943718 | TCCTTTTTGGTTCTCGGTGTATATTT | 59.056 | 34.615 | 0.00 | 0.00 | 37.07 | 1.40 |
11 | 12 | 6.373495 | GTCCTTTTTGGTTCTCGGTGTATATT | 59.627 | 38.462 | 0.00 | 0.00 | 37.07 | 1.28 |
12 | 13 | 5.878669 | GTCCTTTTTGGTTCTCGGTGTATAT | 59.121 | 40.000 | 0.00 | 0.00 | 37.07 | 0.86 |
13 | 14 | 5.221682 | TGTCCTTTTTGGTTCTCGGTGTATA | 60.222 | 40.000 | 0.00 | 0.00 | 37.07 | 1.47 |
14 | 15 | 4.070009 | GTCCTTTTTGGTTCTCGGTGTAT | 58.930 | 43.478 | 0.00 | 0.00 | 37.07 | 2.29 |
15 | 16 | 3.118334 | TGTCCTTTTTGGTTCTCGGTGTA | 60.118 | 43.478 | 0.00 | 0.00 | 37.07 | 2.90 |
16 | 17 | 2.294979 | GTCCTTTTTGGTTCTCGGTGT | 58.705 | 47.619 | 0.00 | 0.00 | 37.07 | 4.16 |
17 | 18 | 2.294074 | TGTCCTTTTTGGTTCTCGGTG | 58.706 | 47.619 | 0.00 | 0.00 | 37.07 | 4.94 |
18 | 19 | 2.721425 | TGTCCTTTTTGGTTCTCGGT | 57.279 | 45.000 | 0.00 | 0.00 | 37.07 | 4.69 |
19 | 20 | 4.546570 | GATTTGTCCTTTTTGGTTCTCGG | 58.453 | 43.478 | 0.00 | 0.00 | 37.07 | 4.63 |
20 | 21 | 4.037446 | TGGATTTGTCCTTTTTGGTTCTCG | 59.963 | 41.667 | 0.00 | 0.00 | 37.07 | 4.04 |
21 | 22 | 5.529581 | TGGATTTGTCCTTTTTGGTTCTC | 57.470 | 39.130 | 0.00 | 0.00 | 37.07 | 2.87 |
22 | 23 | 5.602145 | TCATGGATTTGTCCTTTTTGGTTCT | 59.398 | 36.000 | 0.00 | 0.00 | 37.07 | 3.01 |
23 | 24 | 5.852827 | TCATGGATTTGTCCTTTTTGGTTC | 58.147 | 37.500 | 0.00 | 0.00 | 37.07 | 3.62 |
24 | 25 | 5.885449 | TCATGGATTTGTCCTTTTTGGTT | 57.115 | 34.783 | 0.00 | 0.00 | 37.07 | 3.67 |
25 | 26 | 5.543405 | TCATCATGGATTTGTCCTTTTTGGT | 59.457 | 36.000 | 0.00 | 0.00 | 37.07 | 3.67 |
26 | 27 | 6.040209 | TCATCATGGATTTGTCCTTTTTGG | 57.960 | 37.500 | 0.00 | 0.00 | 37.10 | 3.28 |
27 | 28 | 9.309516 | CTATTCATCATGGATTTGTCCTTTTTG | 57.690 | 33.333 | 0.00 | 0.00 | 0.00 | 2.44 |
28 | 29 | 9.039165 | ACTATTCATCATGGATTTGTCCTTTTT | 57.961 | 29.630 | 0.00 | 0.00 | 0.00 | 1.94 |
29 | 30 | 8.472413 | CACTATTCATCATGGATTTGTCCTTTT | 58.528 | 33.333 | 0.00 | 0.00 | 0.00 | 2.27 |
30 | 31 | 7.616935 | ACACTATTCATCATGGATTTGTCCTTT | 59.383 | 33.333 | 0.00 | 0.00 | 0.00 | 3.11 |
31 | 32 | 7.121382 | ACACTATTCATCATGGATTTGTCCTT | 58.879 | 34.615 | 0.00 | 0.00 | 0.00 | 3.36 |
32 | 33 | 6.666678 | ACACTATTCATCATGGATTTGTCCT | 58.333 | 36.000 | 0.00 | 0.00 | 0.00 | 3.85 |
33 | 34 | 6.543465 | TGACACTATTCATCATGGATTTGTCC | 59.457 | 38.462 | 14.05 | 0.00 | 30.77 | 4.02 |
34 | 35 | 7.558161 | TGACACTATTCATCATGGATTTGTC | 57.442 | 36.000 | 11.29 | 11.29 | 0.00 | 3.18 |
35 | 36 | 7.943079 | TTGACACTATTCATCATGGATTTGT | 57.057 | 32.000 | 0.00 | 0.00 | 0.00 | 2.83 |
36 | 37 | 9.297586 | CTTTTGACACTATTCATCATGGATTTG | 57.702 | 33.333 | 0.00 | 0.00 | 0.00 | 2.32 |
37 | 38 | 9.246670 | TCTTTTGACACTATTCATCATGGATTT | 57.753 | 29.630 | 0.00 | 0.00 | 0.00 | 2.17 |
38 | 39 | 8.812513 | TCTTTTGACACTATTCATCATGGATT | 57.187 | 30.769 | 0.00 | 0.00 | 0.00 | 3.01 |
39 | 40 | 8.812513 | TTCTTTTGACACTATTCATCATGGAT | 57.187 | 30.769 | 0.00 | 0.00 | 0.00 | 3.41 |
40 | 41 | 8.102676 | TCTTCTTTTGACACTATTCATCATGGA | 58.897 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
41 | 42 | 8.180267 | GTCTTCTTTTGACACTATTCATCATGG | 58.820 | 37.037 | 0.00 | 0.00 | 34.80 | 3.66 |
42 | 43 | 8.724229 | TGTCTTCTTTTGACACTATTCATCATG | 58.276 | 33.333 | 0.00 | 0.00 | 39.23 | 3.07 |
43 | 44 | 8.853077 | TGTCTTCTTTTGACACTATTCATCAT | 57.147 | 30.769 | 0.00 | 0.00 | 39.23 | 2.45 |
44 | 45 | 8.675705 | TTGTCTTCTTTTGACACTATTCATCA | 57.324 | 30.769 | 0.00 | 0.00 | 43.13 | 3.07 |
45 | 46 | 9.950680 | TTTTGTCTTCTTTTGACACTATTCATC | 57.049 | 29.630 | 0.00 | 0.00 | 43.13 | 2.92 |
47 | 48 | 9.567848 | GTTTTTGTCTTCTTTTGACACTATTCA | 57.432 | 29.630 | 0.00 | 0.00 | 43.13 | 2.57 |
48 | 49 | 9.567848 | TGTTTTTGTCTTCTTTTGACACTATTC | 57.432 | 29.630 | 0.00 | 0.00 | 43.13 | 1.75 |
49 | 50 | 9.921637 | TTGTTTTTGTCTTCTTTTGACACTATT | 57.078 | 25.926 | 0.00 | 0.00 | 43.13 | 1.73 |
50 | 51 | 9.921637 | TTTGTTTTTGTCTTCTTTTGACACTAT | 57.078 | 25.926 | 0.00 | 0.00 | 43.13 | 2.12 |
51 | 52 | 9.751542 | TTTTGTTTTTGTCTTCTTTTGACACTA | 57.248 | 25.926 | 0.00 | 0.00 | 43.13 | 2.74 |
52 | 53 | 8.655651 | TTTTGTTTTTGTCTTCTTTTGACACT | 57.344 | 26.923 | 0.00 | 0.00 | 43.13 | 3.55 |
53 | 54 | 9.877137 | ATTTTTGTTTTTGTCTTCTTTTGACAC | 57.123 | 25.926 | 0.00 | 0.00 | 43.13 | 3.67 |
54 | 55 | 9.875675 | CATTTTTGTTTTTGTCTTCTTTTGACA | 57.124 | 25.926 | 0.00 | 0.00 | 41.94 | 3.58 |
57 | 58 | 9.875675 | TGTCATTTTTGTTTTTGTCTTCTTTTG | 57.124 | 25.926 | 0.00 | 0.00 | 0.00 | 2.44 |
58 | 59 | 9.877137 | GTGTCATTTTTGTTTTTGTCTTCTTTT | 57.123 | 25.926 | 0.00 | 0.00 | 0.00 | 2.27 |
59 | 60 | 9.271828 | AGTGTCATTTTTGTTTTTGTCTTCTTT | 57.728 | 25.926 | 0.00 | 0.00 | 0.00 | 2.52 |
60 | 61 | 8.831715 | AGTGTCATTTTTGTTTTTGTCTTCTT | 57.168 | 26.923 | 0.00 | 0.00 | 0.00 | 2.52 |
64 | 65 | 9.868277 | TGAATAGTGTCATTTTTGTTTTTGTCT | 57.132 | 25.926 | 0.00 | 0.00 | 0.00 | 3.41 |
65 | 66 | 9.900264 | GTGAATAGTGTCATTTTTGTTTTTGTC | 57.100 | 29.630 | 0.00 | 0.00 | 0.00 | 3.18 |
66 | 67 | 9.429359 | TGTGAATAGTGTCATTTTTGTTTTTGT | 57.571 | 25.926 | 0.00 | 0.00 | 0.00 | 2.83 |
70 | 71 | 9.467258 | CAGATGTGAATAGTGTCATTTTTGTTT | 57.533 | 29.630 | 0.00 | 0.00 | 0.00 | 2.83 |
71 | 72 | 8.849168 | TCAGATGTGAATAGTGTCATTTTTGTT | 58.151 | 29.630 | 0.00 | 0.00 | 0.00 | 2.83 |
72 | 73 | 8.394971 | TCAGATGTGAATAGTGTCATTTTTGT | 57.605 | 30.769 | 0.00 | 0.00 | 0.00 | 2.83 |
87 | 88 | 8.945481 | ACAAAAATGACAAATTCAGATGTGAA | 57.055 | 26.923 | 7.86 | 7.86 | 46.81 | 3.18 |
88 | 89 | 8.945481 | AACAAAAATGACAAATTCAGATGTGA | 57.055 | 26.923 | 0.00 | 0.00 | 37.77 | 3.58 |
89 | 90 | 9.640974 | GAAACAAAAATGACAAATTCAGATGTG | 57.359 | 29.630 | 0.00 | 0.00 | 37.77 | 3.21 |
90 | 91 | 9.603921 | AGAAACAAAAATGACAAATTCAGATGT | 57.396 | 25.926 | 0.00 | 0.00 | 37.77 | 3.06 |
92 | 93 | 9.264719 | GGAGAAACAAAAATGACAAATTCAGAT | 57.735 | 29.630 | 0.00 | 0.00 | 37.77 | 2.90 |
93 | 94 | 7.434897 | CGGAGAAACAAAAATGACAAATTCAGA | 59.565 | 33.333 | 0.00 | 0.00 | 37.77 | 3.27 |
94 | 95 | 7.222611 | ACGGAGAAACAAAAATGACAAATTCAG | 59.777 | 33.333 | 0.00 | 0.00 | 37.77 | 3.02 |
95 | 96 | 7.009999 | CACGGAGAAACAAAAATGACAAATTCA | 59.990 | 33.333 | 0.00 | 0.00 | 39.11 | 2.57 |
96 | 97 | 7.010091 | ACACGGAGAAACAAAAATGACAAATTC | 59.990 | 33.333 | 0.00 | 0.00 | 0.00 | 2.17 |
97 | 98 | 6.816140 | ACACGGAGAAACAAAAATGACAAATT | 59.184 | 30.769 | 0.00 | 0.00 | 0.00 | 1.82 |
98 | 99 | 6.255453 | CACACGGAGAAACAAAAATGACAAAT | 59.745 | 34.615 | 0.00 | 0.00 | 0.00 | 2.32 |
99 | 100 | 5.574830 | CACACGGAGAAACAAAAATGACAAA | 59.425 | 36.000 | 0.00 | 0.00 | 0.00 | 2.83 |
100 | 101 | 5.098893 | CACACGGAGAAACAAAAATGACAA | 58.901 | 37.500 | 0.00 | 0.00 | 0.00 | 3.18 |
101 | 102 | 4.156922 | ACACACGGAGAAACAAAAATGACA | 59.843 | 37.500 | 0.00 | 0.00 | 0.00 | 3.58 |
102 | 103 | 4.668289 | ACACACGGAGAAACAAAAATGAC | 58.332 | 39.130 | 0.00 | 0.00 | 0.00 | 3.06 |
103 | 104 | 4.974368 | ACACACGGAGAAACAAAAATGA | 57.026 | 36.364 | 0.00 | 0.00 | 0.00 | 2.57 |
104 | 105 | 7.357206 | CGAATTACACACGGAGAAACAAAAATG | 60.357 | 37.037 | 0.00 | 0.00 | 0.00 | 2.32 |
105 | 106 | 6.635239 | CGAATTACACACGGAGAAACAAAAAT | 59.365 | 34.615 | 0.00 | 0.00 | 0.00 | 1.82 |
106 | 107 | 5.966503 | CGAATTACACACGGAGAAACAAAAA | 59.033 | 36.000 | 0.00 | 0.00 | 0.00 | 1.94 |
107 | 108 | 5.064962 | ACGAATTACACACGGAGAAACAAAA | 59.935 | 36.000 | 0.00 | 0.00 | 0.00 | 2.44 |
108 | 109 | 4.571580 | ACGAATTACACACGGAGAAACAAA | 59.428 | 37.500 | 0.00 | 0.00 | 0.00 | 2.83 |
109 | 110 | 4.121317 | ACGAATTACACACGGAGAAACAA | 58.879 | 39.130 | 0.00 | 0.00 | 0.00 | 2.83 |
110 | 111 | 3.719924 | ACGAATTACACACGGAGAAACA | 58.280 | 40.909 | 0.00 | 0.00 | 0.00 | 2.83 |
111 | 112 | 6.399204 | AATACGAATTACACACGGAGAAAC | 57.601 | 37.500 | 0.00 | 0.00 | 0.00 | 2.78 |
112 | 113 | 6.128499 | CCAAATACGAATTACACACGGAGAAA | 60.128 | 38.462 | 0.00 | 0.00 | 0.00 | 2.52 |
113 | 114 | 5.349270 | CCAAATACGAATTACACACGGAGAA | 59.651 | 40.000 | 0.00 | 0.00 | 0.00 | 2.87 |
114 | 115 | 4.865925 | CCAAATACGAATTACACACGGAGA | 59.134 | 41.667 | 0.00 | 0.00 | 0.00 | 3.71 |
115 | 116 | 4.865925 | TCCAAATACGAATTACACACGGAG | 59.134 | 41.667 | 0.00 | 0.00 | 0.00 | 4.63 |
116 | 117 | 4.818642 | TCCAAATACGAATTACACACGGA | 58.181 | 39.130 | 0.00 | 0.00 | 0.00 | 4.69 |
117 | 118 | 5.522460 | AGATCCAAATACGAATTACACACGG | 59.478 | 40.000 | 0.00 | 0.00 | 0.00 | 4.94 |
118 | 119 | 6.254804 | TCAGATCCAAATACGAATTACACACG | 59.745 | 38.462 | 0.00 | 0.00 | 0.00 | 4.49 |
119 | 120 | 7.534085 | TCAGATCCAAATACGAATTACACAC | 57.466 | 36.000 | 0.00 | 0.00 | 0.00 | 3.82 |
120 | 121 | 8.731275 | ATTCAGATCCAAATACGAATTACACA | 57.269 | 30.769 | 0.00 | 0.00 | 0.00 | 3.72 |
127 | 128 | 8.682710 | CCCTAAAAATTCAGATCCAAATACGAA | 58.317 | 33.333 | 0.00 | 0.00 | 0.00 | 3.85 |
128 | 129 | 7.284489 | CCCCTAAAAATTCAGATCCAAATACGA | 59.716 | 37.037 | 0.00 | 0.00 | 0.00 | 3.43 |
129 | 130 | 7.068226 | ACCCCTAAAAATTCAGATCCAAATACG | 59.932 | 37.037 | 0.00 | 0.00 | 0.00 | 3.06 |
130 | 131 | 8.306313 | ACCCCTAAAAATTCAGATCCAAATAC | 57.694 | 34.615 | 0.00 | 0.00 | 0.00 | 1.89 |
131 | 132 | 8.757877 | CAACCCCTAAAAATTCAGATCCAAATA | 58.242 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
132 | 133 | 7.237471 | ACAACCCCTAAAAATTCAGATCCAAAT | 59.763 | 33.333 | 0.00 | 0.00 | 0.00 | 2.32 |
133 | 134 | 6.556874 | ACAACCCCTAAAAATTCAGATCCAAA | 59.443 | 34.615 | 0.00 | 0.00 | 0.00 | 3.28 |
134 | 135 | 6.081356 | ACAACCCCTAAAAATTCAGATCCAA | 58.919 | 36.000 | 0.00 | 0.00 | 0.00 | 3.53 |
135 | 136 | 5.650283 | ACAACCCCTAAAAATTCAGATCCA | 58.350 | 37.500 | 0.00 | 0.00 | 0.00 | 3.41 |
136 | 137 | 5.163652 | CGACAACCCCTAAAAATTCAGATCC | 60.164 | 44.000 | 0.00 | 0.00 | 0.00 | 3.36 |
137 | 138 | 5.646360 | TCGACAACCCCTAAAAATTCAGATC | 59.354 | 40.000 | 0.00 | 0.00 | 0.00 | 2.75 |
138 | 139 | 5.414765 | GTCGACAACCCCTAAAAATTCAGAT | 59.585 | 40.000 | 11.55 | 0.00 | 0.00 | 2.90 |
139 | 140 | 4.758165 | GTCGACAACCCCTAAAAATTCAGA | 59.242 | 41.667 | 11.55 | 0.00 | 0.00 | 3.27 |
140 | 141 | 4.517453 | TGTCGACAACCCCTAAAAATTCAG | 59.483 | 41.667 | 17.62 | 0.00 | 0.00 | 3.02 |
141 | 142 | 4.462133 | TGTCGACAACCCCTAAAAATTCA | 58.538 | 39.130 | 17.62 | 0.00 | 0.00 | 2.57 |
142 | 143 | 5.638596 | ATGTCGACAACCCCTAAAAATTC | 57.361 | 39.130 | 24.13 | 0.00 | 0.00 | 2.17 |
143 | 144 | 6.717997 | ACTTATGTCGACAACCCCTAAAAATT | 59.282 | 34.615 | 24.13 | 3.36 | 0.00 | 1.82 |
144 | 145 | 6.150474 | CACTTATGTCGACAACCCCTAAAAAT | 59.850 | 38.462 | 24.13 | 3.58 | 0.00 | 1.82 |
145 | 146 | 5.470777 | CACTTATGTCGACAACCCCTAAAAA | 59.529 | 40.000 | 24.13 | 5.17 | 0.00 | 1.94 |
146 | 147 | 4.998672 | CACTTATGTCGACAACCCCTAAAA | 59.001 | 41.667 | 24.13 | 6.14 | 0.00 | 1.52 |
147 | 148 | 4.040706 | ACACTTATGTCGACAACCCCTAAA | 59.959 | 41.667 | 24.13 | 7.45 | 31.55 | 1.85 |
148 | 149 | 3.579586 | ACACTTATGTCGACAACCCCTAA | 59.420 | 43.478 | 24.13 | 14.60 | 31.55 | 2.69 |
149 | 150 | 3.167485 | ACACTTATGTCGACAACCCCTA | 58.833 | 45.455 | 24.13 | 7.06 | 31.55 | 3.53 |
150 | 151 | 1.975680 | ACACTTATGTCGACAACCCCT | 59.024 | 47.619 | 24.13 | 8.19 | 31.55 | 4.79 |
151 | 152 | 2.467566 | ACACTTATGTCGACAACCCC | 57.532 | 50.000 | 24.13 | 0.00 | 31.55 | 4.95 |
152 | 153 | 5.163794 | CCAAATACACTTATGTCGACAACCC | 60.164 | 44.000 | 24.13 | 0.00 | 40.48 | 4.11 |
153 | 154 | 5.640357 | TCCAAATACACTTATGTCGACAACC | 59.360 | 40.000 | 24.13 | 0.00 | 40.48 | 3.77 |
154 | 155 | 6.715344 | TCCAAATACACTTATGTCGACAAC | 57.285 | 37.500 | 24.13 | 0.00 | 40.48 | 3.32 |
155 | 156 | 7.100409 | TGATCCAAATACACTTATGTCGACAA | 58.900 | 34.615 | 24.13 | 5.99 | 40.48 | 3.18 |
156 | 157 | 6.635755 | TGATCCAAATACACTTATGTCGACA | 58.364 | 36.000 | 22.48 | 22.48 | 40.48 | 4.35 |
157 | 158 | 7.534085 | TTGATCCAAATACACTTATGTCGAC | 57.466 | 36.000 | 9.11 | 9.11 | 40.48 | 4.20 |
158 | 159 | 8.731275 | AATTGATCCAAATACACTTATGTCGA | 57.269 | 30.769 | 0.00 | 0.00 | 40.48 | 4.20 |
159 | 160 | 9.787532 | AAAATTGATCCAAATACACTTATGTCG | 57.212 | 29.630 | 0.00 | 0.00 | 40.48 | 4.35 |
220 | 221 | 6.242396 | TGCTCCTATGCTACCAACTTAAAAA | 58.758 | 36.000 | 0.00 | 0.00 | 0.00 | 1.94 |
221 | 222 | 5.811190 | TGCTCCTATGCTACCAACTTAAAA | 58.189 | 37.500 | 0.00 | 0.00 | 0.00 | 1.52 |
222 | 223 | 5.429681 | TGCTCCTATGCTACCAACTTAAA | 57.570 | 39.130 | 0.00 | 0.00 | 0.00 | 1.52 |
223 | 224 | 5.611374 | GATGCTCCTATGCTACCAACTTAA | 58.389 | 41.667 | 0.00 | 0.00 | 0.00 | 1.85 |
224 | 225 | 4.262036 | CGATGCTCCTATGCTACCAACTTA | 60.262 | 45.833 | 0.00 | 0.00 | 0.00 | 2.24 |
225 | 226 | 3.493350 | CGATGCTCCTATGCTACCAACTT | 60.493 | 47.826 | 0.00 | 0.00 | 0.00 | 2.66 |
226 | 227 | 2.036475 | CGATGCTCCTATGCTACCAACT | 59.964 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
227 | 228 | 2.408050 | CGATGCTCCTATGCTACCAAC | 58.592 | 52.381 | 0.00 | 0.00 | 0.00 | 3.77 |
228 | 229 | 1.344438 | CCGATGCTCCTATGCTACCAA | 59.656 | 52.381 | 0.00 | 0.00 | 0.00 | 3.67 |
229 | 230 | 0.969149 | CCGATGCTCCTATGCTACCA | 59.031 | 55.000 | 0.00 | 0.00 | 0.00 | 3.25 |
230 | 231 | 1.203523 | CTCCGATGCTCCTATGCTACC | 59.796 | 57.143 | 0.00 | 0.00 | 0.00 | 3.18 |
231 | 232 | 1.203523 | CCTCCGATGCTCCTATGCTAC | 59.796 | 57.143 | 0.00 | 0.00 | 0.00 | 3.58 |
232 | 233 | 1.550327 | CCTCCGATGCTCCTATGCTA | 58.450 | 55.000 | 0.00 | 0.00 | 0.00 | 3.49 |
233 | 234 | 1.190833 | CCCTCCGATGCTCCTATGCT | 61.191 | 60.000 | 0.00 | 0.00 | 0.00 | 3.79 |
234 | 235 | 1.294780 | CCCTCCGATGCTCCTATGC | 59.705 | 63.158 | 0.00 | 0.00 | 0.00 | 3.14 |
235 | 236 | 1.051812 | AACCCTCCGATGCTCCTATG | 58.948 | 55.000 | 0.00 | 0.00 | 0.00 | 2.23 |
236 | 237 | 1.051812 | CAACCCTCCGATGCTCCTAT | 58.948 | 55.000 | 0.00 | 0.00 | 0.00 | 2.57 |
237 | 238 | 1.048724 | CCAACCCTCCGATGCTCCTA | 61.049 | 60.000 | 0.00 | 0.00 | 0.00 | 2.94 |
238 | 239 | 2.370445 | CCAACCCTCCGATGCTCCT | 61.370 | 63.158 | 0.00 | 0.00 | 0.00 | 3.69 |
239 | 240 | 1.335132 | TACCAACCCTCCGATGCTCC | 61.335 | 60.000 | 0.00 | 0.00 | 0.00 | 4.70 |
240 | 241 | 0.759346 | ATACCAACCCTCCGATGCTC | 59.241 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
241 | 242 | 0.759346 | GATACCAACCCTCCGATGCT | 59.241 | 55.000 | 0.00 | 0.00 | 0.00 | 3.79 |
242 | 243 | 0.468226 | TGATACCAACCCTCCGATGC | 59.532 | 55.000 | 0.00 | 0.00 | 0.00 | 3.91 |
243 | 244 | 1.202651 | GGTGATACCAACCCTCCGATG | 60.203 | 57.143 | 0.00 | 0.00 | 38.42 | 3.84 |
244 | 245 | 1.129058 | GGTGATACCAACCCTCCGAT | 58.871 | 55.000 | 0.00 | 0.00 | 38.42 | 4.18 |
245 | 246 | 0.042131 | AGGTGATACCAACCCTCCGA | 59.958 | 55.000 | 0.28 | 0.00 | 41.95 | 4.55 |
246 | 247 | 1.784358 | TAGGTGATACCAACCCTCCG | 58.216 | 55.000 | 0.28 | 0.00 | 41.95 | 4.63 |
247 | 248 | 4.906060 | AGTATTAGGTGATACCAACCCTCC | 59.094 | 45.833 | 0.28 | 0.00 | 41.95 | 4.30 |
248 | 249 | 6.496144 | AAGTATTAGGTGATACCAACCCTC | 57.504 | 41.667 | 0.28 | 0.00 | 41.95 | 4.30 |
249 | 250 | 6.126565 | GGAAAGTATTAGGTGATACCAACCCT | 60.127 | 42.308 | 0.28 | 0.00 | 41.95 | 4.34 |
250 | 251 | 6.060136 | GGAAAGTATTAGGTGATACCAACCC | 58.940 | 44.000 | 0.28 | 0.00 | 41.95 | 4.11 |
251 | 252 | 6.060136 | GGGAAAGTATTAGGTGATACCAACC | 58.940 | 44.000 | 0.28 | 0.00 | 41.95 | 3.77 |
252 | 253 | 6.655930 | TGGGAAAGTATTAGGTGATACCAAC | 58.344 | 40.000 | 0.28 | 0.00 | 41.95 | 3.77 |
253 | 254 | 6.894735 | TGGGAAAGTATTAGGTGATACCAA | 57.105 | 37.500 | 0.28 | 0.00 | 41.95 | 3.67 |
254 | 255 | 6.849697 | AGATGGGAAAGTATTAGGTGATACCA | 59.150 | 38.462 | 0.28 | 0.00 | 41.95 | 3.25 |
255 | 256 | 7.317722 | AGATGGGAAAGTATTAGGTGATACC | 57.682 | 40.000 | 0.00 | 0.00 | 38.99 | 2.73 |
256 | 257 | 7.387643 | GGAGATGGGAAAGTATTAGGTGATAC | 58.612 | 42.308 | 0.00 | 0.00 | 33.61 | 2.24 |
257 | 258 | 6.210784 | CGGAGATGGGAAAGTATTAGGTGATA | 59.789 | 42.308 | 0.00 | 0.00 | 0.00 | 2.15 |
258 | 259 | 5.012148 | CGGAGATGGGAAAGTATTAGGTGAT | 59.988 | 44.000 | 0.00 | 0.00 | 0.00 | 3.06 |
259 | 260 | 4.344102 | CGGAGATGGGAAAGTATTAGGTGA | 59.656 | 45.833 | 0.00 | 0.00 | 0.00 | 4.02 |
260 | 261 | 4.503296 | CCGGAGATGGGAAAGTATTAGGTG | 60.503 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
261 | 262 | 3.646637 | CCGGAGATGGGAAAGTATTAGGT | 59.353 | 47.826 | 0.00 | 0.00 | 0.00 | 3.08 |
262 | 263 | 3.646637 | ACCGGAGATGGGAAAGTATTAGG | 59.353 | 47.826 | 9.46 | 0.00 | 0.00 | 2.69 |
263 | 264 | 4.957684 | ACCGGAGATGGGAAAGTATTAG | 57.042 | 45.455 | 9.46 | 0.00 | 0.00 | 1.73 |
264 | 265 | 4.279169 | CGTACCGGAGATGGGAAAGTATTA | 59.721 | 45.833 | 9.46 | 0.00 | 0.00 | 0.98 |
265 | 266 | 3.069158 | CGTACCGGAGATGGGAAAGTATT | 59.931 | 47.826 | 9.46 | 0.00 | 0.00 | 1.89 |
266 | 267 | 2.626743 | CGTACCGGAGATGGGAAAGTAT | 59.373 | 50.000 | 9.46 | 0.00 | 0.00 | 2.12 |
267 | 268 | 2.026641 | CGTACCGGAGATGGGAAAGTA | 58.973 | 52.381 | 9.46 | 0.00 | 0.00 | 2.24 |
268 | 269 | 0.822164 | CGTACCGGAGATGGGAAAGT | 59.178 | 55.000 | 9.46 | 0.00 | 0.00 | 2.66 |
269 | 270 | 0.529992 | GCGTACCGGAGATGGGAAAG | 60.530 | 60.000 | 9.46 | 0.00 | 0.00 | 2.62 |
270 | 271 | 0.974010 | AGCGTACCGGAGATGGGAAA | 60.974 | 55.000 | 9.46 | 0.00 | 0.00 | 3.13 |
271 | 272 | 1.380785 | AGCGTACCGGAGATGGGAA | 60.381 | 57.895 | 9.46 | 0.00 | 0.00 | 3.97 |
272 | 273 | 1.826921 | GAGCGTACCGGAGATGGGA | 60.827 | 63.158 | 9.46 | 0.00 | 0.00 | 4.37 |
273 | 274 | 2.728817 | GAGCGTACCGGAGATGGG | 59.271 | 66.667 | 9.46 | 0.00 | 0.00 | 4.00 |
274 | 275 | 1.828660 | AGGAGCGTACCGGAGATGG | 60.829 | 63.158 | 9.46 | 0.00 | 34.73 | 3.51 |
275 | 276 | 1.360551 | CAGGAGCGTACCGGAGATG | 59.639 | 63.158 | 9.46 | 1.56 | 34.73 | 2.90 |
276 | 277 | 1.828660 | CCAGGAGCGTACCGGAGAT | 60.829 | 63.158 | 9.46 | 0.00 | 34.73 | 2.75 |
277 | 278 | 2.439701 | CCAGGAGCGTACCGGAGA | 60.440 | 66.667 | 9.46 | 0.00 | 34.73 | 3.71 |
278 | 279 | 2.005960 | CTTCCAGGAGCGTACCGGAG | 62.006 | 65.000 | 9.46 | 0.00 | 35.43 | 4.63 |
279 | 280 | 2.036098 | TTCCAGGAGCGTACCGGA | 59.964 | 61.111 | 9.46 | 5.88 | 33.44 | 5.14 |
280 | 281 | 1.601419 | TTCTTCCAGGAGCGTACCGG | 61.601 | 60.000 | 0.00 | 0.00 | 34.73 | 5.28 |
281 | 282 | 0.460311 | ATTCTTCCAGGAGCGTACCG | 59.540 | 55.000 | 0.00 | 0.00 | 34.73 | 4.02 |
282 | 283 | 2.093658 | TCAATTCTTCCAGGAGCGTACC | 60.094 | 50.000 | 0.00 | 0.00 | 0.00 | 3.34 |
283 | 284 | 3.119101 | TCTCAATTCTTCCAGGAGCGTAC | 60.119 | 47.826 | 0.00 | 0.00 | 0.00 | 3.67 |
284 | 285 | 3.096852 | TCTCAATTCTTCCAGGAGCGTA | 58.903 | 45.455 | 0.00 | 0.00 | 0.00 | 4.42 |
285 | 286 | 1.902508 | TCTCAATTCTTCCAGGAGCGT | 59.097 | 47.619 | 0.00 | 0.00 | 0.00 | 5.07 |
286 | 287 | 2.275318 | GTCTCAATTCTTCCAGGAGCG | 58.725 | 52.381 | 0.00 | 0.00 | 0.00 | 5.03 |
287 | 288 | 3.006247 | GTGTCTCAATTCTTCCAGGAGC | 58.994 | 50.000 | 0.00 | 0.00 | 0.00 | 4.70 |
288 | 289 | 3.008375 | TGGTGTCTCAATTCTTCCAGGAG | 59.992 | 47.826 | 0.00 | 0.00 | 0.00 | 3.69 |
289 | 290 | 2.978978 | TGGTGTCTCAATTCTTCCAGGA | 59.021 | 45.455 | 0.00 | 0.00 | 0.00 | 3.86 |
290 | 291 | 3.423539 | TGGTGTCTCAATTCTTCCAGG | 57.576 | 47.619 | 0.00 | 0.00 | 0.00 | 4.45 |
291 | 292 | 4.580167 | TGTTTGGTGTCTCAATTCTTCCAG | 59.420 | 41.667 | 0.00 | 0.00 | 0.00 | 3.86 |
292 | 293 | 4.338118 | GTGTTTGGTGTCTCAATTCTTCCA | 59.662 | 41.667 | 0.00 | 0.00 | 0.00 | 3.53 |
293 | 294 | 4.580580 | AGTGTTTGGTGTCTCAATTCTTCC | 59.419 | 41.667 | 0.00 | 0.00 | 0.00 | 3.46 |
294 | 295 | 5.506317 | CCAGTGTTTGGTGTCTCAATTCTTC | 60.506 | 44.000 | 0.00 | 0.00 | 42.41 | 2.87 |
295 | 296 | 4.339247 | CCAGTGTTTGGTGTCTCAATTCTT | 59.661 | 41.667 | 0.00 | 0.00 | 42.41 | 2.52 |
296 | 297 | 3.885297 | CCAGTGTTTGGTGTCTCAATTCT | 59.115 | 43.478 | 0.00 | 0.00 | 42.41 | 2.40 |
297 | 298 | 4.228912 | CCAGTGTTTGGTGTCTCAATTC | 57.771 | 45.455 | 0.00 | 0.00 | 42.41 | 2.17 |
336 | 337 | 0.250081 | TCCACACACGCATTAGCACA | 60.250 | 50.000 | 0.00 | 0.00 | 42.27 | 4.57 |
374 | 376 | 1.401931 | CGTCGACCCGTACATTCACTT | 60.402 | 52.381 | 10.58 | 0.00 | 0.00 | 3.16 |
424 | 434 | 3.696051 | GCCTCAGCCTTGATTTGTAATGA | 59.304 | 43.478 | 0.00 | 0.00 | 31.68 | 2.57 |
425 | 435 | 3.698040 | AGCCTCAGCCTTGATTTGTAATG | 59.302 | 43.478 | 0.00 | 0.00 | 41.25 | 1.90 |
485 | 495 | 3.006537 | ACGCTCCGCCACTTATGTAATAT | 59.993 | 43.478 | 0.00 | 0.00 | 0.00 | 1.28 |
486 | 496 | 2.363038 | ACGCTCCGCCACTTATGTAATA | 59.637 | 45.455 | 0.00 | 0.00 | 0.00 | 0.98 |
650 | 772 | 3.118482 | TGCATTCCTTGGAGATCAGAGAC | 60.118 | 47.826 | 0.00 | 0.00 | 0.00 | 3.36 |
906 | 1498 | 0.540923 | TCCATGCATCGTGGACATGA | 59.459 | 50.000 | 3.30 | 0.00 | 43.70 | 3.07 |
907 | 1499 | 3.083686 | TCCATGCATCGTGGACATG | 57.916 | 52.632 | 3.30 | 0.00 | 43.70 | 3.21 |
980 | 1574 | 4.379499 | GCATCCAACTTGGTTAACTGTAGC | 60.379 | 45.833 | 7.72 | 0.00 | 39.03 | 3.58 |
982 | 1576 | 4.517453 | GTGCATCCAACTTGGTTAACTGTA | 59.483 | 41.667 | 7.72 | 0.00 | 39.03 | 2.74 |
983 | 1577 | 3.317993 | GTGCATCCAACTTGGTTAACTGT | 59.682 | 43.478 | 7.72 | 0.00 | 39.03 | 3.55 |
984 | 1578 | 3.305335 | GGTGCATCCAACTTGGTTAACTG | 60.305 | 47.826 | 7.72 | 0.00 | 39.03 | 3.16 |
987 | 1582 | 2.950781 | TGGTGCATCCAACTTGGTTAA | 58.049 | 42.857 | 7.72 | 0.00 | 44.12 | 2.01 |
1024 | 1621 | 4.204799 | AGGGGTGTTTTAAGACTTGTGTC | 58.795 | 43.478 | 0.00 | 0.00 | 43.22 | 3.67 |
1065 | 1662 | 5.306678 | AGATGGAAAGCTCTGGAATAGGTAG | 59.693 | 44.000 | 0.00 | 0.00 | 0.00 | 3.18 |
1066 | 1663 | 5.219739 | AGATGGAAAGCTCTGGAATAGGTA | 58.780 | 41.667 | 0.00 | 0.00 | 0.00 | 3.08 |
1067 | 1664 | 4.043596 | AGATGGAAAGCTCTGGAATAGGT | 58.956 | 43.478 | 0.00 | 0.00 | 0.00 | 3.08 |
1068 | 1665 | 4.703379 | AGATGGAAAGCTCTGGAATAGG | 57.297 | 45.455 | 0.00 | 0.00 | 0.00 | 2.57 |
1077 | 1674 | 6.412362 | TGGACTAGAATAGATGGAAAGCTC | 57.588 | 41.667 | 0.00 | 0.00 | 42.77 | 4.09 |
1118 | 1715 | 0.614294 | TGGACTATCCCCGCGAAAAA | 59.386 | 50.000 | 8.23 | 0.00 | 35.03 | 1.94 |
1119 | 1716 | 0.834612 | ATGGACTATCCCCGCGAAAA | 59.165 | 50.000 | 8.23 | 0.00 | 35.03 | 2.29 |
1120 | 1717 | 1.707106 | TATGGACTATCCCCGCGAAA | 58.293 | 50.000 | 8.23 | 0.00 | 35.03 | 3.46 |
1121 | 1718 | 1.933021 | ATATGGACTATCCCCGCGAA | 58.067 | 50.000 | 8.23 | 0.00 | 35.03 | 4.70 |
1122 | 1719 | 2.651455 | CTATATGGACTATCCCCGCGA | 58.349 | 52.381 | 8.23 | 0.00 | 35.03 | 5.87 |
1123 | 1720 | 1.067212 | GCTATATGGACTATCCCCGCG | 59.933 | 57.143 | 0.00 | 0.00 | 35.03 | 6.46 |
1124 | 1721 | 2.108168 | TGCTATATGGACTATCCCCGC | 58.892 | 52.381 | 0.00 | 0.00 | 35.03 | 6.13 |
1125 | 1722 | 2.431057 | GGTGCTATATGGACTATCCCCG | 59.569 | 54.545 | 0.00 | 0.00 | 35.03 | 5.73 |
1126 | 1723 | 2.772515 | GGGTGCTATATGGACTATCCCC | 59.227 | 54.545 | 0.00 | 0.00 | 35.03 | 4.81 |
1127 | 1724 | 3.452627 | CAGGGTGCTATATGGACTATCCC | 59.547 | 52.174 | 0.00 | 0.00 | 35.03 | 3.85 |
1128 | 1725 | 4.160626 | GTCAGGGTGCTATATGGACTATCC | 59.839 | 50.000 | 0.00 | 0.00 | 37.18 | 2.59 |
1129 | 1726 | 4.160626 | GGTCAGGGTGCTATATGGACTATC | 59.839 | 50.000 | 0.00 | 0.00 | 37.18 | 2.08 |
1130 | 1727 | 4.097418 | GGTCAGGGTGCTATATGGACTAT | 58.903 | 47.826 | 0.00 | 0.00 | 37.18 | 2.12 |
1133 | 1730 | 2.037772 | CTGGTCAGGGTGCTATATGGAC | 59.962 | 54.545 | 0.00 | 0.00 | 36.19 | 4.02 |
1175 | 1773 | 7.389330 | CCATGATAATTATAACCAGCGTACCAA | 59.611 | 37.037 | 0.00 | 0.00 | 0.00 | 3.67 |
1176 | 1774 | 6.876789 | CCATGATAATTATAACCAGCGTACCA | 59.123 | 38.462 | 0.00 | 0.00 | 0.00 | 3.25 |
1177 | 1775 | 6.183360 | GCCATGATAATTATAACCAGCGTACC | 60.183 | 42.308 | 0.00 | 0.00 | 0.00 | 3.34 |
1187 | 1785 | 8.163408 | ACAGCAAGGTAGCCATGATAATTATAA | 58.837 | 33.333 | 0.00 | 0.00 | 34.23 | 0.98 |
1188 | 1786 | 7.689299 | ACAGCAAGGTAGCCATGATAATTATA | 58.311 | 34.615 | 0.00 | 0.00 | 34.23 | 0.98 |
1189 | 1787 | 6.546484 | ACAGCAAGGTAGCCATGATAATTAT | 58.454 | 36.000 | 0.00 | 0.00 | 34.23 | 1.28 |
1190 | 1788 | 5.940617 | ACAGCAAGGTAGCCATGATAATTA | 58.059 | 37.500 | 0.00 | 0.00 | 34.23 | 1.40 |
1191 | 1789 | 4.796606 | ACAGCAAGGTAGCCATGATAATT | 58.203 | 39.130 | 0.00 | 0.00 | 34.23 | 1.40 |
1192 | 1790 | 4.443978 | ACAGCAAGGTAGCCATGATAAT | 57.556 | 40.909 | 0.00 | 0.00 | 34.23 | 1.28 |
1232 | 1836 | 3.153919 | TGGGACAATACCACTCTTTTGC | 58.846 | 45.455 | 0.00 | 0.00 | 31.92 | 3.68 |
1255 | 1859 | 0.246635 | CCTCGTCGTGTCCATTCCTT | 59.753 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
1258 | 1862 | 0.526662 | AGACCTCGTCGTGTCCATTC | 59.473 | 55.000 | 12.03 | 0.00 | 37.67 | 2.67 |
1261 | 1865 | 2.916052 | GCAGACCTCGTCGTGTCCA | 61.916 | 63.158 | 12.03 | 0.00 | 37.67 | 4.02 |
1264 | 1868 | 2.645567 | CAGCAGACCTCGTCGTGT | 59.354 | 61.111 | 0.00 | 0.00 | 37.67 | 4.49 |
1452 | 2056 | 3.700038 | CCTTCTTCCGTAGTACCTCACAT | 59.300 | 47.826 | 0.00 | 0.00 | 0.00 | 3.21 |
1815 | 2419 | 3.331889 | CCTCATATCCAGGCCCATTAGTT | 59.668 | 47.826 | 0.00 | 0.00 | 0.00 | 2.24 |
1850 | 2454 | 1.136774 | GCCTTAAAAAGAGCGGCCG | 59.863 | 57.895 | 24.05 | 24.05 | 34.75 | 6.13 |
1863 | 2467 | 1.072266 | ACACATGGTTGAGGGCCTTA | 58.928 | 50.000 | 7.89 | 0.00 | 0.00 | 2.69 |
1865 | 2469 | 0.328258 | GTACACATGGTTGAGGGCCT | 59.672 | 55.000 | 5.25 | 5.25 | 0.00 | 5.19 |
1999 | 2603 | 0.181114 | CTTTCATGGATCCGCTCCCA | 59.819 | 55.000 | 7.39 | 0.00 | 44.23 | 4.37 |
2142 | 2746 | 2.225255 | GAGGTAGATCGTACTAACCGCC | 59.775 | 54.545 | 0.00 | 0.00 | 31.14 | 6.13 |
2271 | 2879 | 1.885887 | TGCAAGCACCATTTCCTACAC | 59.114 | 47.619 | 0.00 | 0.00 | 0.00 | 2.90 |
2300 | 2908 | 1.712401 | CAACCGCATTTGATGGGTTG | 58.288 | 50.000 | 18.25 | 18.25 | 45.78 | 3.77 |
2348 | 2956 | 3.863142 | GCTTTTTGCATGATCTCTGGT | 57.137 | 42.857 | 0.00 | 0.00 | 42.31 | 4.00 |
2391 | 2999 | 7.363031 | TCCTGGACTAGTCTATCTTTACCAAT | 58.637 | 38.462 | 21.88 | 0.00 | 0.00 | 3.16 |
2423 | 3031 | 9.436957 | GATTTGAGATAATTTAGCCGAGGAATA | 57.563 | 33.333 | 0.00 | 0.00 | 0.00 | 1.75 |
2613 | 3221 | 2.691011 | GCCTCTCAGGACGAAACTCTAT | 59.309 | 50.000 | 0.00 | 0.00 | 37.67 | 1.98 |
2615 | 3223 | 0.892063 | GCCTCTCAGGACGAAACTCT | 59.108 | 55.000 | 0.00 | 0.00 | 37.67 | 3.24 |
2637 | 3245 | 5.869344 | TGAGAAGAACATTCACGGTATTCAG | 59.131 | 40.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2803 | 3411 | 5.236047 | GCATTGCTTTCCTGTAGACTGATAG | 59.764 | 44.000 | 0.16 | 0.00 | 0.00 | 2.08 |
2873 | 3481 | 3.577649 | TTATAGAGATACGCAGCCAGC | 57.422 | 47.619 | 0.00 | 0.00 | 40.87 | 4.85 |
2874 | 3482 | 5.714047 | TCATTTATAGAGATACGCAGCCAG | 58.286 | 41.667 | 0.00 | 0.00 | 0.00 | 4.85 |
2952 | 3564 | 3.002791 | ACATCTTGCACACATAGTTCCG | 58.997 | 45.455 | 0.00 | 0.00 | 0.00 | 4.30 |
2961 | 3573 | 0.792640 | CCTCACGACATCTTGCACAC | 59.207 | 55.000 | 0.00 | 0.00 | 0.00 | 3.82 |
2962 | 3574 | 0.320683 | CCCTCACGACATCTTGCACA | 60.321 | 55.000 | 0.00 | 0.00 | 0.00 | 4.57 |
2963 | 3575 | 1.639298 | GCCCTCACGACATCTTGCAC | 61.639 | 60.000 | 0.00 | 0.00 | 0.00 | 4.57 |
2964 | 3576 | 1.375908 | GCCCTCACGACATCTTGCA | 60.376 | 57.895 | 0.00 | 0.00 | 0.00 | 4.08 |
2965 | 3577 | 2.456119 | CGCCCTCACGACATCTTGC | 61.456 | 63.158 | 0.00 | 0.00 | 34.06 | 4.01 |
2966 | 3578 | 1.811266 | CCGCCCTCACGACATCTTG | 60.811 | 63.158 | 0.00 | 0.00 | 34.06 | 3.02 |
2967 | 3579 | 2.579201 | CCGCCCTCACGACATCTT | 59.421 | 61.111 | 0.00 | 0.00 | 34.06 | 2.40 |
2968 | 3580 | 4.148825 | GCCGCCCTCACGACATCT | 62.149 | 66.667 | 0.00 | 0.00 | 34.06 | 2.90 |
2969 | 3581 | 3.740128 | ATGCCGCCCTCACGACATC | 62.740 | 63.158 | 0.00 | 0.00 | 29.72 | 3.06 |
2970 | 3582 | 3.329542 | AATGCCGCCCTCACGACAT | 62.330 | 57.895 | 0.00 | 0.00 | 37.77 | 3.06 |
2971 | 3583 | 3.950794 | GAATGCCGCCCTCACGACA | 62.951 | 63.158 | 0.00 | 0.00 | 34.06 | 4.35 |
2972 | 3584 | 3.195698 | GAATGCCGCCCTCACGAC | 61.196 | 66.667 | 0.00 | 0.00 | 34.06 | 4.34 |
2973 | 3585 | 3.664025 | CTGAATGCCGCCCTCACGA | 62.664 | 63.158 | 0.00 | 0.00 | 34.06 | 4.35 |
2974 | 3586 | 3.197790 | CTGAATGCCGCCCTCACG | 61.198 | 66.667 | 0.00 | 0.00 | 0.00 | 4.35 |
2975 | 3587 | 1.648467 | GAACTGAATGCCGCCCTCAC | 61.648 | 60.000 | 0.00 | 0.00 | 0.00 | 3.51 |
2978 | 3590 | 0.962356 | CAAGAACTGAATGCCGCCCT | 60.962 | 55.000 | 0.00 | 0.00 | 0.00 | 5.19 |
2989 | 3601 | 7.223582 | CAGTATCTAGTATGTTGCCAAGAACTG | 59.776 | 40.741 | 0.00 | 0.00 | 0.00 | 3.16 |
2993 | 3605 | 5.128663 | TGCAGTATCTAGTATGTTGCCAAGA | 59.871 | 40.000 | 0.00 | 0.00 | 0.00 | 3.02 |
3016 | 3628 | 5.484173 | TGTTCCTTTATTAGCGCAGAATG | 57.516 | 39.130 | 11.47 | 0.00 | 40.87 | 2.67 |
3017 | 3629 | 6.238759 | GGATTGTTCCTTTATTAGCGCAGAAT | 60.239 | 38.462 | 11.47 | 11.59 | 39.14 | 2.40 |
3020 | 3636 | 4.552767 | CGGATTGTTCCTTTATTAGCGCAG | 60.553 | 45.833 | 11.47 | 0.00 | 40.17 | 5.18 |
3025 | 3641 | 5.924475 | ATCGCGGATTGTTCCTTTATTAG | 57.076 | 39.130 | 6.13 | 0.00 | 40.17 | 1.73 |
3026 | 3642 | 6.055231 | CAATCGCGGATTGTTCCTTTATTA | 57.945 | 37.500 | 6.13 | 0.00 | 42.89 | 0.98 |
3041 | 3657 | 6.370593 | ACATTAATTATAGCAACAATCGCGG | 58.629 | 36.000 | 6.13 | 0.00 | 0.00 | 6.46 |
3042 | 3658 | 8.827599 | GTTACATTAATTATAGCAACAATCGCG | 58.172 | 33.333 | 0.00 | 0.00 | 0.00 | 5.87 |
3043 | 3659 | 9.878599 | AGTTACATTAATTATAGCAACAATCGC | 57.121 | 29.630 | 0.00 | 0.00 | 0.00 | 4.58 |
3105 | 3721 | 2.674357 | CAACTAAAAATGCTGCCATGGC | 59.326 | 45.455 | 30.54 | 30.54 | 42.35 | 4.40 |
3106 | 3722 | 2.674357 | GCAACTAAAAATGCTGCCATGG | 59.326 | 45.455 | 7.63 | 7.63 | 39.46 | 3.66 |
3113 | 3729 | 3.726291 | ACAACGGCAACTAAAAATGCT | 57.274 | 38.095 | 0.00 | 0.00 | 42.20 | 3.79 |
3114 | 3730 | 4.979815 | AGTTACAACGGCAACTAAAAATGC | 59.020 | 37.500 | 0.00 | 0.00 | 41.82 | 3.56 |
3115 | 3731 | 7.458038 | AAAGTTACAACGGCAACTAAAAATG | 57.542 | 32.000 | 0.00 | 0.00 | 33.92 | 2.32 |
3116 | 3732 | 8.481974 | AAAAAGTTACAACGGCAACTAAAAAT | 57.518 | 26.923 | 0.00 | 0.00 | 33.92 | 1.82 |
3117 | 3733 | 7.886405 | AAAAAGTTACAACGGCAACTAAAAA | 57.114 | 28.000 | 0.00 | 0.00 | 33.92 | 1.94 |
3159 | 3775 | 9.150028 | TGTGCTATTATGACATTAGGGTACTAA | 57.850 | 33.333 | 0.00 | 0.00 | 42.95 | 2.24 |
3160 | 3776 | 8.715190 | TGTGCTATTATGACATTAGGGTACTA | 57.285 | 34.615 | 0.00 | 0.00 | 0.00 | 1.82 |
3161 | 3777 | 7.612065 | TGTGCTATTATGACATTAGGGTACT | 57.388 | 36.000 | 0.00 | 0.00 | 0.00 | 2.73 |
3162 | 3778 | 8.848474 | AATGTGCTATTATGACATTAGGGTAC | 57.152 | 34.615 | 0.00 | 0.00 | 38.29 | 3.34 |
3163 | 3779 | 9.502091 | GAAATGTGCTATTATGACATTAGGGTA | 57.498 | 33.333 | 0.00 | 0.00 | 38.96 | 3.69 |
3164 | 3780 | 7.998383 | TGAAATGTGCTATTATGACATTAGGGT | 59.002 | 33.333 | 0.00 | 0.00 | 38.96 | 4.34 |
3165 | 3781 | 8.394971 | TGAAATGTGCTATTATGACATTAGGG | 57.605 | 34.615 | 0.00 | 0.00 | 38.96 | 3.53 |
3179 | 3795 | 9.062524 | ACTAAAGTGTGTATTTGAAATGTGCTA | 57.937 | 29.630 | 0.00 | 0.00 | 0.00 | 3.49 |
3180 | 3796 | 7.940850 | ACTAAAGTGTGTATTTGAAATGTGCT | 58.059 | 30.769 | 0.00 | 0.00 | 0.00 | 4.40 |
3181 | 3797 | 9.113876 | GTACTAAAGTGTGTATTTGAAATGTGC | 57.886 | 33.333 | 0.00 | 0.00 | 0.00 | 4.57 |
3187 | 3803 | 9.991388 | GTTGTTGTACTAAAGTGTGTATTTGAA | 57.009 | 29.630 | 0.00 | 0.00 | 0.00 | 2.69 |
3188 | 3804 | 9.386010 | AGTTGTTGTACTAAAGTGTGTATTTGA | 57.614 | 29.630 | 0.00 | 0.00 | 0.00 | 2.69 |
3189 | 3805 | 9.646336 | GAGTTGTTGTACTAAAGTGTGTATTTG | 57.354 | 33.333 | 0.00 | 0.00 | 0.00 | 2.32 |
3190 | 3806 | 9.609346 | AGAGTTGTTGTACTAAAGTGTGTATTT | 57.391 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
3191 | 3807 | 9.257651 | GAGAGTTGTTGTACTAAAGTGTGTATT | 57.742 | 33.333 | 0.00 | 0.00 | 0.00 | 1.89 |
3192 | 3808 | 8.639761 | AGAGAGTTGTTGTACTAAAGTGTGTAT | 58.360 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
3193 | 3809 | 8.004087 | AGAGAGTTGTTGTACTAAAGTGTGTA | 57.996 | 34.615 | 0.00 | 0.00 | 0.00 | 2.90 |
3194 | 3810 | 6.875076 | AGAGAGTTGTTGTACTAAAGTGTGT | 58.125 | 36.000 | 0.00 | 0.00 | 0.00 | 3.72 |
3195 | 3811 | 8.867112 | TTAGAGAGTTGTTGTACTAAAGTGTG | 57.133 | 34.615 | 0.00 | 0.00 | 0.00 | 3.82 |
3196 | 3812 | 9.477484 | CATTAGAGAGTTGTTGTACTAAAGTGT | 57.523 | 33.333 | 0.00 | 0.00 | 0.00 | 3.55 |
3197 | 3813 | 9.477484 | ACATTAGAGAGTTGTTGTACTAAAGTG | 57.523 | 33.333 | 0.00 | 0.00 | 0.00 | 3.16 |
3249 | 3865 | 9.891828 | CACAAAGCACTTTCAATTATACACTTA | 57.108 | 29.630 | 0.00 | 0.00 | 0.00 | 2.24 |
3250 | 3866 | 8.413229 | ACACAAAGCACTTTCAATTATACACTT | 58.587 | 29.630 | 0.00 | 0.00 | 0.00 | 3.16 |
3251 | 3867 | 7.862372 | CACACAAAGCACTTTCAATTATACACT | 59.138 | 33.333 | 0.00 | 0.00 | 0.00 | 3.55 |
3252 | 3868 | 7.358352 | GCACACAAAGCACTTTCAATTATACAC | 60.358 | 37.037 | 0.00 | 0.00 | 0.00 | 2.90 |
3253 | 3869 | 6.640499 | GCACACAAAGCACTTTCAATTATACA | 59.360 | 34.615 | 0.00 | 0.00 | 0.00 | 2.29 |
3254 | 3870 | 6.640499 | TGCACACAAAGCACTTTCAATTATAC | 59.360 | 34.615 | 0.00 | 0.00 | 37.02 | 1.47 |
3255 | 3871 | 6.743110 | TGCACACAAAGCACTTTCAATTATA | 58.257 | 32.000 | 0.00 | 0.00 | 37.02 | 0.98 |
3256 | 3872 | 5.599732 | TGCACACAAAGCACTTTCAATTAT | 58.400 | 33.333 | 0.00 | 0.00 | 37.02 | 1.28 |
3257 | 3873 | 5.003692 | TGCACACAAAGCACTTTCAATTA | 57.996 | 34.783 | 0.00 | 0.00 | 37.02 | 1.40 |
3258 | 3874 | 3.859443 | TGCACACAAAGCACTTTCAATT | 58.141 | 36.364 | 0.00 | 0.00 | 37.02 | 2.32 |
3259 | 3875 | 3.523606 | TGCACACAAAGCACTTTCAAT | 57.476 | 38.095 | 0.00 | 0.00 | 37.02 | 2.57 |
3260 | 3876 | 3.523606 | ATGCACACAAAGCACTTTCAA | 57.476 | 38.095 | 0.00 | 0.00 | 45.95 | 2.69 |
3261 | 3877 | 4.852134 | ATATGCACACAAAGCACTTTCA | 57.148 | 36.364 | 0.00 | 0.00 | 45.95 | 2.69 |
3262 | 3878 | 7.471721 | TGTATATATGCACACAAAGCACTTTC | 58.528 | 34.615 | 0.00 | 0.00 | 45.95 | 2.62 |
3263 | 3879 | 7.389803 | TGTATATATGCACACAAAGCACTTT | 57.610 | 32.000 | 0.00 | 0.00 | 45.95 | 2.66 |
3264 | 3880 | 7.094420 | TGTTGTATATATGCACACAAAGCACTT | 60.094 | 33.333 | 2.64 | 0.00 | 45.95 | 3.16 |
3265 | 3881 | 6.374053 | TGTTGTATATATGCACACAAAGCACT | 59.626 | 34.615 | 2.64 | 0.00 | 45.95 | 4.40 |
3266 | 3882 | 6.550843 | TGTTGTATATATGCACACAAAGCAC | 58.449 | 36.000 | 2.64 | 0.00 | 45.95 | 4.40 |
3294 | 3910 | 9.816354 | AAAAAGAGTTGTTGTTGCACTAAATAT | 57.184 | 25.926 | 0.00 | 0.00 | 0.00 | 1.28 |
3319 | 3935 | 4.261825 | CCGGTTGATGGCTAAACTGAAAAA | 60.262 | 41.667 | 0.00 | 0.00 | 35.12 | 1.94 |
3320 | 3936 | 3.254657 | CCGGTTGATGGCTAAACTGAAAA | 59.745 | 43.478 | 0.00 | 0.00 | 35.12 | 2.29 |
3321 | 3937 | 2.817258 | CCGGTTGATGGCTAAACTGAAA | 59.183 | 45.455 | 0.00 | 0.00 | 35.12 | 2.69 |
3322 | 3938 | 2.432444 | CCGGTTGATGGCTAAACTGAA | 58.568 | 47.619 | 0.00 | 0.00 | 35.12 | 3.02 |
3323 | 3939 | 2.107950 | CCGGTTGATGGCTAAACTGA | 57.892 | 50.000 | 0.00 | 0.00 | 35.12 | 3.41 |
3391 | 4008 | 6.715347 | TGCAGAGCACTATGTATCTCTTAA | 57.285 | 37.500 | 0.00 | 0.00 | 33.99 | 1.85 |
3505 | 4123 | 1.832608 | TCACTGAGCGGTGGACTGT | 60.833 | 57.895 | 9.39 | 0.00 | 37.75 | 3.55 |
3586 | 4206 | 2.748058 | ATCCGTTTTGACCGCAGCCT | 62.748 | 55.000 | 0.00 | 0.00 | 0.00 | 4.58 |
3704 | 4329 | 1.175983 | TGTCAATGGTGGCGGTTTCC | 61.176 | 55.000 | 0.00 | 0.00 | 29.15 | 3.13 |
3717 | 4342 | 3.081804 | GTTTGGTCTTCCCGATGTCAAT | 58.918 | 45.455 | 0.00 | 0.00 | 35.15 | 2.57 |
3721 | 4346 | 0.768622 | TGGTTTGGTCTTCCCGATGT | 59.231 | 50.000 | 0.00 | 0.00 | 35.15 | 3.06 |
3724 | 4349 | 0.685097 | CTCTGGTTTGGTCTTCCCGA | 59.315 | 55.000 | 0.00 | 0.00 | 35.15 | 5.14 |
3803 | 4428 | 0.976641 | ATTTGCCTCTCCTCGTGTGA | 59.023 | 50.000 | 0.00 | 0.00 | 0.00 | 3.58 |
3816 | 4441 | 3.386867 | CTCTCGCCGTGCATTTGCC | 62.387 | 63.158 | 0.00 | 0.00 | 41.18 | 4.52 |
3834 | 4461 | 2.780065 | TGCAGCTTTGTCATCAACAC | 57.220 | 45.000 | 0.00 | 0.00 | 37.70 | 3.32 |
![](/static/images/cyverse_long.png)
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.