Multiple sequence alignment - TraesCS2A01G009200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G009200 chr2A 100.000 2771 0 0 1 2771 3768967 3766197 0.000000e+00 5118.0
1 TraesCS2A01G009200 chr2A 94.888 2269 105 7 1 2265 766840614 766842875 0.000000e+00 3537.0
2 TraesCS2A01G009200 chr4A 97.087 2266 64 2 1 2265 16991025 16993289 0.000000e+00 3818.0
3 TraesCS2A01G009200 chr4A 97.500 40 1 0 2531 2570 734453363 734453402 4.950000e-08 69.4
4 TraesCS2A01G009200 chr5D 95.765 2267 76 3 1 2266 26675137 26677384 0.000000e+00 3637.0
5 TraesCS2A01G009200 chr3D 94.799 2269 102 9 1 2265 104033324 104035580 0.000000e+00 3522.0
6 TraesCS2A01G009200 chr1A 94.667 2269 96 6 1 2267 556832333 556834578 0.000000e+00 3496.0
7 TraesCS2A01G009200 chr1A 94.579 2269 97 7 1 2266 556821756 556819511 0.000000e+00 3485.0
8 TraesCS2A01G009200 chr1A 94.131 2266 105 8 1 2264 553063579 553065818 0.000000e+00 3422.0
9 TraesCS2A01G009200 chr1A 94.092 2268 101 10 1 2265 555945929 555943692 0.000000e+00 3415.0
10 TraesCS2A01G009200 chr1A 96.566 1980 67 1 1 1979 8023789 8025768 0.000000e+00 3278.0
11 TraesCS2A01G009200 chr7A 94.574 2267 95 8 1 2265 589766623 589764383 0.000000e+00 3480.0
12 TraesCS2A01G009200 chr2B 95.892 706 28 1 1561 2265 175424419 175423714 0.000000e+00 1142.0
13 TraesCS2A01G009200 chr6A 95.362 539 23 2 1728 2265 40741963 40741426 0.000000e+00 856.0
14 TraesCS2A01G009200 chr6A 95.176 539 25 1 1728 2265 58609187 58609725 0.000000e+00 850.0
15 TraesCS2A01G009200 chr1B 95.946 518 19 2 1749 2265 373111590 373111074 0.000000e+00 839.0
16 TraesCS2A01G009200 chr1B 95.000 320 13 1 2435 2751 588219681 588219362 1.480000e-137 499.0
17 TraesCS2A01G009200 chr1B 98.039 51 1 0 2347 2397 588226043 588225993 3.800000e-14 89.8
18 TraesCS2A01G009200 chr1B 100.000 40 0 0 2531 2570 63910034 63909995 1.060000e-09 75.0
19 TraesCS2A01G009200 chr1B 97.500 40 1 0 2531 2570 60380405 60380444 4.950000e-08 69.4
20 TraesCS2A01G009200 chr3B 88.012 342 33 6 1930 2266 215889265 215889603 5.560000e-107 398.0
21 TraesCS2A01G009200 chr3B 81.707 82 15 0 2185 2266 809870110 809870191 4.950000e-08 69.4
22 TraesCS2A01G009200 chr6B 90.476 210 13 2 2531 2733 514683685 514683476 1.260000e-68 270.0
23 TraesCS2A01G009200 chr6B 97.500 40 1 0 2531 2570 521445992 521445953 4.950000e-08 69.4
24 TraesCS2A01G009200 chr2D 100.000 80 0 0 2265 2344 5202329 5202250 6.180000e-32 148.0
25 TraesCS2A01G009200 chr1D 89.744 78 8 0 2268 2345 182313813 182313736 1.760000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G009200 chr2A 3766197 3768967 2770 True 5118 5118 100.000 1 2771 1 chr2A.!!$R1 2770
1 TraesCS2A01G009200 chr2A 766840614 766842875 2261 False 3537 3537 94.888 1 2265 1 chr2A.!!$F1 2264
2 TraesCS2A01G009200 chr4A 16991025 16993289 2264 False 3818 3818 97.087 1 2265 1 chr4A.!!$F1 2264
3 TraesCS2A01G009200 chr5D 26675137 26677384 2247 False 3637 3637 95.765 1 2266 1 chr5D.!!$F1 2265
4 TraesCS2A01G009200 chr3D 104033324 104035580 2256 False 3522 3522 94.799 1 2265 1 chr3D.!!$F1 2264
5 TraesCS2A01G009200 chr1A 556832333 556834578 2245 False 3496 3496 94.667 1 2267 1 chr1A.!!$F3 2266
6 TraesCS2A01G009200 chr1A 556819511 556821756 2245 True 3485 3485 94.579 1 2266 1 chr1A.!!$R2 2265
7 TraesCS2A01G009200 chr1A 553063579 553065818 2239 False 3422 3422 94.131 1 2264 1 chr1A.!!$F2 2263
8 TraesCS2A01G009200 chr1A 555943692 555945929 2237 True 3415 3415 94.092 1 2265 1 chr1A.!!$R1 2264
9 TraesCS2A01G009200 chr1A 8023789 8025768 1979 False 3278 3278 96.566 1 1979 1 chr1A.!!$F1 1978
10 TraesCS2A01G009200 chr7A 589764383 589766623 2240 True 3480 3480 94.574 1 2265 1 chr7A.!!$R1 2264
11 TraesCS2A01G009200 chr2B 175423714 175424419 705 True 1142 1142 95.892 1561 2265 1 chr2B.!!$R1 704
12 TraesCS2A01G009200 chr6A 40741426 40741963 537 True 856 856 95.362 1728 2265 1 chr6A.!!$R1 537
13 TraesCS2A01G009200 chr6A 58609187 58609725 538 False 850 850 95.176 1728 2265 1 chr6A.!!$F1 537
14 TraesCS2A01G009200 chr1B 373111074 373111590 516 True 839 839 95.946 1749 2265 1 chr1B.!!$R2 516

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
645 650 4.39742 TGTGTGATATGGCAAGTTCTTGT 58.603 39.13 13.04 0.0 0.0 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2306 2337 0.034089 GCATTACCTCCAACCAGGCT 60.034 55.0 0.0 0.0 36.98 4.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
645 650 4.397420 TGTGTGATATGGCAAGTTCTTGT 58.603 39.130 13.04 0.00 0.00 3.16
750 756 9.590451 TTACTTGACCATATTCCTAGTTTAACG 57.410 33.333 0.00 0.00 0.00 3.18
1102 1110 2.811431 TGTTTGACTATCGCCAAAGGTG 59.189 45.455 0.00 0.00 33.52 4.00
1104 1112 3.965379 TTGACTATCGCCAAAGGTGTA 57.035 42.857 0.00 0.00 34.40 2.90
1145 1153 9.533253 CATAGAACCATCATTTCCAATAAAACC 57.467 33.333 0.00 0.00 0.00 3.27
1179 1187 6.729690 AGGAAGAAACAATTTGATGAACCA 57.270 33.333 2.79 0.00 0.00 3.67
1186 1194 8.859090 AGAAACAATTTGATGAACCAGATAACA 58.141 29.630 2.79 0.00 0.00 2.41
1208 1216 8.479313 AACAAAGAAAAAGTTCTAAAAGCTGG 57.521 30.769 0.00 0.00 43.59 4.85
1397 1405 7.011576 TGCTAAGTTCGTAGAAACATTTTCACA 59.988 33.333 1.72 0.00 45.90 3.58
1593 1602 3.900966 ATGACTGTAGCATCAGCAGAA 57.099 42.857 7.84 0.00 45.49 3.02
1595 1604 2.299867 TGACTGTAGCATCAGCAGAACA 59.700 45.455 7.84 0.00 45.49 3.18
1647 1656 5.862924 ACTATTTGAGGTCAACAATGTCG 57.137 39.130 0.00 0.00 35.28 4.35
1668 1677 4.578601 CGCAAGAACGATTAAATGGTCTC 58.421 43.478 0.00 0.00 43.02 3.36
1868 1877 5.066593 GGTGAAGAACTTTGGAGTGAAGAT 58.933 41.667 0.00 0.00 35.91 2.40
1955 1968 7.493320 TGGTAACACAAAAGATATAAGTAGCGG 59.507 37.037 0.00 0.00 46.17 5.52
2159 2190 6.207614 TCATCAGACTATGCTATGTACTGGAC 59.792 42.308 0.00 0.00 0.00 4.02
2277 2308 4.659172 CCCTGCTCCCCGTTTGCA 62.659 66.667 0.00 0.00 35.30 4.08
2278 2309 2.597217 CCTGCTCCCCGTTTGCAA 60.597 61.111 0.00 0.00 36.22 4.08
2279 2310 2.644992 CTGCTCCCCGTTTGCAAC 59.355 61.111 0.00 0.00 36.22 4.17
2280 2311 1.898574 CTGCTCCCCGTTTGCAACT 60.899 57.895 0.00 0.00 36.22 3.16
2281 2312 0.605319 CTGCTCCCCGTTTGCAACTA 60.605 55.000 0.00 0.00 36.22 2.24
2282 2313 0.179015 TGCTCCCCGTTTGCAACTAA 60.179 50.000 0.00 0.00 33.48 2.24
2283 2314 0.955905 GCTCCCCGTTTGCAACTAAA 59.044 50.000 0.00 0.00 0.00 1.85
2284 2315 1.335597 GCTCCCCGTTTGCAACTAAAC 60.336 52.381 0.00 0.00 37.23 2.01
2285 2316 1.950909 CTCCCCGTTTGCAACTAAACA 59.049 47.619 0.00 0.00 39.84 2.83
2286 2317 1.677052 TCCCCGTTTGCAACTAAACAC 59.323 47.619 0.00 0.00 39.84 3.32
2287 2318 1.598430 CCCCGTTTGCAACTAAACACG 60.598 52.381 11.21 11.21 39.84 4.49
2288 2319 1.064357 CCCGTTTGCAACTAAACACGT 59.936 47.619 15.58 0.00 39.84 4.49
2289 2320 2.478200 CCCGTTTGCAACTAAACACGTT 60.478 45.455 15.58 0.00 39.84 3.99
2290 2321 3.172824 CCGTTTGCAACTAAACACGTTT 58.827 40.909 15.58 0.22 39.84 3.60
2291 2322 3.608939 CCGTTTGCAACTAAACACGTTTT 59.391 39.130 15.58 0.00 39.84 2.43
2292 2323 4.090210 CCGTTTGCAACTAAACACGTTTTT 59.910 37.500 15.58 4.90 39.84 1.94
2293 2324 5.234766 CGTTTGCAACTAAACACGTTTTTC 58.765 37.500 2.37 0.00 39.84 2.29
2294 2325 5.059955 CGTTTGCAACTAAACACGTTTTTCT 59.940 36.000 2.37 0.00 39.84 2.52
2295 2326 6.399144 CGTTTGCAACTAAACACGTTTTTCTT 60.399 34.615 2.37 0.00 39.84 2.52
2296 2327 7.201249 CGTTTGCAACTAAACACGTTTTTCTTA 60.201 33.333 2.37 0.00 39.84 2.10
2297 2328 7.728580 TTGCAACTAAACACGTTTTTCTTAG 57.271 32.000 2.37 0.00 34.23 2.18
2298 2329 5.740099 TGCAACTAAACACGTTTTTCTTAGC 59.260 36.000 2.37 5.50 34.23 3.09
2299 2330 5.969435 GCAACTAAACACGTTTTTCTTAGCT 59.031 36.000 2.37 0.00 34.23 3.32
2300 2331 6.140265 GCAACTAAACACGTTTTTCTTAGCTC 59.860 38.462 2.37 0.00 34.23 4.09
2301 2332 6.913873 ACTAAACACGTTTTTCTTAGCTCA 57.086 33.333 2.37 0.00 34.23 4.26
2302 2333 7.311364 ACTAAACACGTTTTTCTTAGCTCAA 57.689 32.000 2.37 0.00 34.23 3.02
2303 2334 7.184779 ACTAAACACGTTTTTCTTAGCTCAAC 58.815 34.615 2.37 0.00 34.23 3.18
2304 2335 5.813080 AACACGTTTTTCTTAGCTCAACT 57.187 34.783 0.00 0.00 0.00 3.16
2305 2336 5.405331 ACACGTTTTTCTTAGCTCAACTC 57.595 39.130 0.00 0.00 0.00 3.01
2306 2337 4.873827 ACACGTTTTTCTTAGCTCAACTCA 59.126 37.500 0.00 0.00 0.00 3.41
2307 2338 5.006746 ACACGTTTTTCTTAGCTCAACTCAG 59.993 40.000 0.00 0.00 0.00 3.35
2308 2339 4.024809 ACGTTTTTCTTAGCTCAACTCAGC 60.025 41.667 0.00 0.00 39.99 4.26
2309 2340 4.611581 CGTTTTTCTTAGCTCAACTCAGCC 60.612 45.833 0.00 0.00 40.65 4.85
2310 2341 4.357918 TTTTCTTAGCTCAACTCAGCCT 57.642 40.909 0.00 0.00 40.65 4.58
2311 2342 3.325293 TTCTTAGCTCAACTCAGCCTG 57.675 47.619 0.00 0.00 40.65 4.85
2312 2343 1.552337 TCTTAGCTCAACTCAGCCTGG 59.448 52.381 0.00 0.00 40.65 4.45
2313 2344 1.277557 CTTAGCTCAACTCAGCCTGGT 59.722 52.381 0.00 0.00 40.65 4.00
2314 2345 1.352083 TAGCTCAACTCAGCCTGGTT 58.648 50.000 0.00 0.00 40.65 3.67
2315 2346 0.250640 AGCTCAACTCAGCCTGGTTG 60.251 55.000 15.66 15.66 40.65 3.77
2316 2347 1.239968 GCTCAACTCAGCCTGGTTGG 61.240 60.000 19.31 13.63 41.91 3.77
2317 2348 0.397941 CTCAACTCAGCCTGGTTGGA 59.602 55.000 19.31 10.00 41.91 3.53
2318 2349 0.397941 TCAACTCAGCCTGGTTGGAG 59.602 55.000 19.31 9.76 41.91 3.86
2319 2350 0.607489 CAACTCAGCCTGGTTGGAGG 60.607 60.000 10.80 4.46 39.08 4.30
2320 2351 1.062488 AACTCAGCCTGGTTGGAGGT 61.062 55.000 10.80 3.60 38.35 3.85
2321 2352 0.178903 ACTCAGCCTGGTTGGAGGTA 60.179 55.000 10.80 0.00 38.35 3.08
2322 2353 0.984230 CTCAGCCTGGTTGGAGGTAA 59.016 55.000 10.80 0.00 38.35 2.85
2323 2354 1.561542 CTCAGCCTGGTTGGAGGTAAT 59.438 52.381 10.80 0.00 38.35 1.89
2324 2355 1.281867 TCAGCCTGGTTGGAGGTAATG 59.718 52.381 10.80 0.00 38.35 1.90
2325 2356 0.034089 AGCCTGGTTGGAGGTAATGC 60.034 55.000 0.00 0.00 38.35 3.56
2326 2357 0.323360 GCCTGGTTGGAGGTAATGCA 60.323 55.000 0.00 0.00 38.35 3.96
2327 2358 1.755179 CCTGGTTGGAGGTAATGCAG 58.245 55.000 0.00 0.00 38.35 4.41
2328 2359 1.683011 CCTGGTTGGAGGTAATGCAGG 60.683 57.143 0.00 0.00 38.35 4.85
2329 2360 0.323360 TGGTTGGAGGTAATGCAGGC 60.323 55.000 0.00 0.00 0.00 4.85
2330 2361 0.323360 GGTTGGAGGTAATGCAGGCA 60.323 55.000 0.00 0.00 0.00 4.75
2331 2362 1.544724 GTTGGAGGTAATGCAGGCAA 58.455 50.000 0.00 0.00 0.00 4.52
2332 2363 1.202348 GTTGGAGGTAATGCAGGCAAC 59.798 52.381 0.00 0.00 0.00 4.17
2333 2364 0.323360 TGGAGGTAATGCAGGCAACC 60.323 55.000 6.97 6.97 37.17 3.77
2334 2365 0.323360 GGAGGTAATGCAGGCAACCA 60.323 55.000 15.41 0.00 31.18 3.67
2335 2366 1.544724 GAGGTAATGCAGGCAACCAA 58.455 50.000 15.41 0.00 31.18 3.67
2336 2367 2.102578 GAGGTAATGCAGGCAACCAAT 58.897 47.619 15.41 0.00 31.18 3.16
2337 2368 2.497273 GAGGTAATGCAGGCAACCAATT 59.503 45.455 15.41 0.92 31.18 2.32
2338 2369 3.699038 GAGGTAATGCAGGCAACCAATTA 59.301 43.478 15.41 0.04 31.18 1.40
2339 2370 4.289245 AGGTAATGCAGGCAACCAATTAT 58.711 39.130 15.41 0.00 31.18 1.28
2340 2371 4.099881 AGGTAATGCAGGCAACCAATTATG 59.900 41.667 15.41 0.00 31.18 1.90
2341 2372 2.607631 ATGCAGGCAACCAATTATGC 57.392 45.000 0.00 2.35 41.82 3.14
2347 2378 0.752658 GCAACCAATTATGCCCTCCC 59.247 55.000 0.00 0.00 36.56 4.30
2348 2379 1.032014 CAACCAATTATGCCCTCCCG 58.968 55.000 0.00 0.00 0.00 5.14
2349 2380 0.755327 AACCAATTATGCCCTCCCGC 60.755 55.000 0.00 0.00 0.00 6.13
2350 2381 1.151450 CCAATTATGCCCTCCCGCT 59.849 57.895 0.00 0.00 0.00 5.52
2351 2382 1.174712 CCAATTATGCCCTCCCGCTG 61.175 60.000 0.00 0.00 0.00 5.18
2352 2383 0.466189 CAATTATGCCCTCCCGCTGT 60.466 55.000 0.00 0.00 0.00 4.40
2353 2384 0.466189 AATTATGCCCTCCCGCTGTG 60.466 55.000 0.00 0.00 0.00 3.66
2354 2385 2.343475 ATTATGCCCTCCCGCTGTGG 62.343 60.000 0.00 0.00 37.55 4.17
2358 2389 4.722700 CCCTCCCGCTGTGGTTGG 62.723 72.222 6.49 7.55 35.15 3.77
2359 2390 3.953775 CCTCCCGCTGTGGTTGGT 61.954 66.667 6.49 0.00 35.15 3.67
2360 2391 2.358737 CTCCCGCTGTGGTTGGTC 60.359 66.667 6.49 0.00 35.15 4.02
2361 2392 4.308458 TCCCGCTGTGGTTGGTCG 62.308 66.667 6.49 0.00 35.15 4.79
2366 2397 3.041940 CTGTGGTTGGTCGGCGTC 61.042 66.667 6.85 0.00 0.00 5.19
2367 2398 4.953868 TGTGGTTGGTCGGCGTCG 62.954 66.667 1.15 1.15 37.82 5.12
2368 2399 4.955774 GTGGTTGGTCGGCGTCGT 62.956 66.667 10.18 0.00 37.69 4.34
2369 2400 4.953868 TGGTTGGTCGGCGTCGTG 62.954 66.667 10.18 0.00 37.69 4.35
2384 2415 3.998672 GTGCCCTCCCGTCGAACA 61.999 66.667 0.00 0.00 0.00 3.18
2385 2416 3.000819 TGCCCTCCCGTCGAACAT 61.001 61.111 0.00 0.00 0.00 2.71
2386 2417 2.511600 GCCCTCCCGTCGAACATG 60.512 66.667 0.00 0.00 0.00 3.21
2387 2418 2.186903 CCCTCCCGTCGAACATGG 59.813 66.667 0.00 0.00 0.00 3.66
2388 2419 2.511600 CCTCCCGTCGAACATGGC 60.512 66.667 0.00 0.00 0.00 4.40
2389 2420 2.885644 CTCCCGTCGAACATGGCG 60.886 66.667 0.00 0.09 0.00 5.69
2393 2424 3.853330 CGTCGAACATGGCGCCAG 61.853 66.667 35.36 26.66 0.00 4.85
2394 2425 3.499737 GTCGAACATGGCGCCAGG 61.500 66.667 37.40 37.40 0.00 4.45
2395 2426 4.776322 TCGAACATGGCGCCAGGG 62.776 66.667 40.47 32.28 31.33 4.45
2415 2446 4.060038 GGCCGACCCATAGATATACATG 57.940 50.000 0.00 0.00 0.00 3.21
2416 2447 3.181465 GGCCGACCCATAGATATACATGG 60.181 52.174 0.00 7.74 41.25 3.66
2417 2448 3.741388 GCCGACCCATAGATATACATGGC 60.741 52.174 8.86 0.00 40.41 4.40
2418 2449 3.490933 CCGACCCATAGATATACATGGCG 60.491 52.174 8.86 8.12 40.41 5.69
2419 2450 3.458189 GACCCATAGATATACATGGCGC 58.542 50.000 0.00 0.00 40.41 6.53
2420 2451 2.170607 ACCCATAGATATACATGGCGCC 59.829 50.000 22.73 22.73 40.41 6.53
2421 2452 2.170397 CCCATAGATATACATGGCGCCA 59.830 50.000 34.80 34.80 40.41 5.69
2422 2453 3.181451 CCCATAGATATACATGGCGCCAT 60.181 47.826 36.10 36.10 40.41 4.40
2443 2474 4.803426 GTCGTGCCCTCCTCGCAG 62.803 72.222 0.00 0.00 36.78 5.18
2445 2476 3.449227 CGTGCCCTCCTCGCAGTA 61.449 66.667 0.00 0.00 36.78 2.74
2446 2477 2.786495 CGTGCCCTCCTCGCAGTAT 61.786 63.158 0.00 0.00 36.78 2.12
2447 2478 1.068250 GTGCCCTCCTCGCAGTATC 59.932 63.158 0.00 0.00 36.78 2.24
2448 2479 1.381191 TGCCCTCCTCGCAGTATCA 60.381 57.895 0.00 0.00 0.00 2.15
2449 2480 1.365633 GCCCTCCTCGCAGTATCAG 59.634 63.158 0.00 0.00 0.00 2.90
2450 2481 2.045280 CCCTCCTCGCAGTATCAGG 58.955 63.158 0.00 0.00 0.00 3.86
2451 2482 0.757188 CCCTCCTCGCAGTATCAGGT 60.757 60.000 0.00 0.00 0.00 4.00
2452 2483 0.671251 CCTCCTCGCAGTATCAGGTC 59.329 60.000 0.00 0.00 0.00 3.85
2453 2484 1.686355 CTCCTCGCAGTATCAGGTCT 58.314 55.000 0.00 0.00 0.00 3.85
2454 2485 1.336440 CTCCTCGCAGTATCAGGTCTG 59.664 57.143 0.00 0.00 35.12 3.51
2455 2486 0.387202 CCTCGCAGTATCAGGTCTGG 59.613 60.000 0.00 0.00 32.94 3.86
2456 2487 1.107114 CTCGCAGTATCAGGTCTGGT 58.893 55.000 0.00 0.00 32.94 4.00
2457 2488 0.817654 TCGCAGTATCAGGTCTGGTG 59.182 55.000 0.00 0.00 32.94 4.17
2458 2489 0.179100 CGCAGTATCAGGTCTGGTGG 60.179 60.000 0.00 0.00 32.94 4.61
2459 2490 1.195115 GCAGTATCAGGTCTGGTGGA 58.805 55.000 0.00 0.00 32.94 4.02
2460 2491 1.555075 GCAGTATCAGGTCTGGTGGAA 59.445 52.381 0.00 0.00 32.94 3.53
2461 2492 2.419297 GCAGTATCAGGTCTGGTGGAAG 60.419 54.545 0.00 0.00 32.94 3.46
2462 2493 1.834263 AGTATCAGGTCTGGTGGAAGC 59.166 52.381 0.00 0.00 0.00 3.86
2463 2494 1.834263 GTATCAGGTCTGGTGGAAGCT 59.166 52.381 0.00 0.00 33.76 3.74
2464 2495 0.908198 ATCAGGTCTGGTGGAAGCTC 59.092 55.000 0.00 0.00 33.76 4.09
2465 2496 1.194781 TCAGGTCTGGTGGAAGCTCC 61.195 60.000 0.00 0.00 36.96 4.70
2466 2497 2.266055 GGTCTGGTGGAAGCTCCG 59.734 66.667 0.00 0.00 40.17 4.63
2467 2498 2.435059 GTCTGGTGGAAGCTCCGC 60.435 66.667 7.09 7.09 46.03 5.54
2468 2499 2.604686 TCTGGTGGAAGCTCCGCT 60.605 61.111 13.24 0.00 46.01 5.52
2476 2507 4.386413 AAGCTCCGCTTCTTGTGG 57.614 55.556 0.00 0.00 46.77 4.17
2477 2508 1.968540 AAGCTCCGCTTCTTGTGGC 60.969 57.895 0.00 0.00 46.77 5.01
2478 2509 3.435186 GCTCCGCTTCTTGTGGCC 61.435 66.667 0.00 0.00 45.61 5.36
2479 2510 3.121030 CTCCGCTTCTTGTGGCCG 61.121 66.667 0.00 0.00 45.61 6.13
2483 2514 4.389576 GCTTCTTGTGGCCGCGTG 62.390 66.667 12.58 6.92 0.00 5.34
2484 2515 2.972505 CTTCTTGTGGCCGCGTGT 60.973 61.111 12.58 0.00 0.00 4.49
2485 2516 3.240606 CTTCTTGTGGCCGCGTGTG 62.241 63.158 12.58 1.54 0.00 3.82
2486 2517 4.539083 TCTTGTGGCCGCGTGTGT 62.539 61.111 12.58 0.00 0.00 3.72
2487 2518 4.012895 CTTGTGGCCGCGTGTGTC 62.013 66.667 12.58 0.00 0.00 3.67
2488 2519 4.539083 TTGTGGCCGCGTGTGTCT 62.539 61.111 12.58 0.00 0.00 3.41
2493 2524 3.269347 GCCGCGTGTGTCTGTGTT 61.269 61.111 4.92 0.00 0.00 3.32
2494 2525 2.625906 CCGCGTGTGTCTGTGTTG 59.374 61.111 4.92 0.00 0.00 3.33
2495 2526 2.053116 CGCGTGTGTCTGTGTTGC 60.053 61.111 0.00 0.00 0.00 4.17
2496 2527 2.327940 GCGTGTGTCTGTGTTGCC 59.672 61.111 0.00 0.00 0.00 4.52
2497 2528 2.625906 CGTGTGTCTGTGTTGCCG 59.374 61.111 0.00 0.00 0.00 5.69
2498 2529 2.171079 CGTGTGTCTGTGTTGCCGT 61.171 57.895 0.00 0.00 0.00 5.68
2499 2530 1.641677 GTGTGTCTGTGTTGCCGTC 59.358 57.895 0.00 0.00 0.00 4.79
2500 2531 1.522806 TGTGTCTGTGTTGCCGTCC 60.523 57.895 0.00 0.00 0.00 4.79
2501 2532 2.279851 TGTCTGTGTTGCCGTCCG 60.280 61.111 0.00 0.00 0.00 4.79
2502 2533 2.028484 GTCTGTGTTGCCGTCCGA 59.972 61.111 0.00 0.00 0.00 4.55
2503 2534 2.028484 TCTGTGTTGCCGTCCGAC 59.972 61.111 0.00 0.00 0.00 4.79
2504 2535 2.279851 CTGTGTTGCCGTCCGACA 60.280 61.111 0.00 0.00 35.45 4.35
2505 2536 1.667830 CTGTGTTGCCGTCCGACAT 60.668 57.895 0.00 0.00 39.93 3.06
2506 2537 1.227704 TGTGTTGCCGTCCGACATT 60.228 52.632 0.00 0.00 39.93 2.71
2507 2538 0.816018 TGTGTTGCCGTCCGACATTT 60.816 50.000 0.00 0.00 39.93 2.32
2508 2539 0.110373 GTGTTGCCGTCCGACATTTC 60.110 55.000 0.00 0.00 39.93 2.17
2509 2540 0.250124 TGTTGCCGTCCGACATTTCT 60.250 50.000 0.00 0.00 32.83 2.52
2510 2541 0.872388 GTTGCCGTCCGACATTTCTT 59.128 50.000 0.00 0.00 0.00 2.52
2511 2542 1.265905 GTTGCCGTCCGACATTTCTTT 59.734 47.619 0.00 0.00 0.00 2.52
2512 2543 0.871722 TGCCGTCCGACATTTCTTTG 59.128 50.000 0.00 0.00 0.00 2.77
2513 2544 0.454452 GCCGTCCGACATTTCTTTGC 60.454 55.000 0.00 0.00 0.00 3.68
2514 2545 1.156736 CCGTCCGACATTTCTTTGCT 58.843 50.000 0.00 0.00 0.00 3.91
2515 2546 1.535462 CCGTCCGACATTTCTTTGCTT 59.465 47.619 0.00 0.00 0.00 3.91
2516 2547 2.412847 CCGTCCGACATTTCTTTGCTTC 60.413 50.000 0.00 0.00 0.00 3.86
2517 2548 2.480419 CGTCCGACATTTCTTTGCTTCT 59.520 45.455 0.00 0.00 0.00 2.85
2518 2549 3.058914 CGTCCGACATTTCTTTGCTTCTT 60.059 43.478 0.00 0.00 0.00 2.52
2519 2550 4.467735 GTCCGACATTTCTTTGCTTCTTC 58.532 43.478 0.00 0.00 0.00 2.87
2520 2551 4.024048 GTCCGACATTTCTTTGCTTCTTCA 60.024 41.667 0.00 0.00 0.00 3.02
2521 2552 4.214119 TCCGACATTTCTTTGCTTCTTCAG 59.786 41.667 0.00 0.00 0.00 3.02
2522 2553 4.023707 CCGACATTTCTTTGCTTCTTCAGT 60.024 41.667 0.00 0.00 0.00 3.41
2523 2554 5.506317 CCGACATTTCTTTGCTTCTTCAGTT 60.506 40.000 0.00 0.00 0.00 3.16
2524 2555 6.293407 CCGACATTTCTTTGCTTCTTCAGTTA 60.293 38.462 0.00 0.00 0.00 2.24
2525 2556 6.575201 CGACATTTCTTTGCTTCTTCAGTTAC 59.425 38.462 0.00 0.00 0.00 2.50
2526 2557 7.333528 ACATTTCTTTGCTTCTTCAGTTACA 57.666 32.000 0.00 0.00 0.00 2.41
2527 2558 7.945134 ACATTTCTTTGCTTCTTCAGTTACAT 58.055 30.769 0.00 0.00 0.00 2.29
2528 2559 9.066892 ACATTTCTTTGCTTCTTCAGTTACATA 57.933 29.630 0.00 0.00 0.00 2.29
2529 2560 9.334693 CATTTCTTTGCTTCTTCAGTTACATAC 57.665 33.333 0.00 0.00 0.00 2.39
2530 2561 8.445275 TTTCTTTGCTTCTTCAGTTACATACA 57.555 30.769 0.00 0.00 0.00 2.29
2531 2562 8.621532 TTCTTTGCTTCTTCAGTTACATACAT 57.378 30.769 0.00 0.00 0.00 2.29
2532 2563 8.032952 TCTTTGCTTCTTCAGTTACATACATG 57.967 34.615 0.00 0.00 0.00 3.21
2533 2564 7.661437 TCTTTGCTTCTTCAGTTACATACATGT 59.339 33.333 2.69 2.69 44.48 3.21
2534 2565 6.726258 TGCTTCTTCAGTTACATACATGTG 57.274 37.500 9.11 0.00 41.89 3.21
2535 2566 5.122239 TGCTTCTTCAGTTACATACATGTGC 59.878 40.000 9.11 0.00 41.89 4.57
2536 2567 5.725042 GCTTCTTCAGTTACATACATGTGCG 60.725 44.000 9.11 1.30 41.89 5.34
2537 2568 5.066968 TCTTCAGTTACATACATGTGCGA 57.933 39.130 9.11 0.00 41.89 5.10
2538 2569 5.474825 TCTTCAGTTACATACATGTGCGAA 58.525 37.500 9.11 0.00 41.89 4.70
2539 2570 6.106003 TCTTCAGTTACATACATGTGCGAAT 58.894 36.000 9.11 0.00 41.89 3.34
2540 2571 7.262048 TCTTCAGTTACATACATGTGCGAATA 58.738 34.615 9.11 0.00 41.89 1.75
2541 2572 7.926018 TCTTCAGTTACATACATGTGCGAATAT 59.074 33.333 9.11 0.00 41.89 1.28
2542 2573 8.432110 TTCAGTTACATACATGTGCGAATATT 57.568 30.769 9.11 0.00 41.89 1.28
2543 2574 8.072238 TCAGTTACATACATGTGCGAATATTC 57.928 34.615 9.11 5.30 41.89 1.75
2544 2575 7.926018 TCAGTTACATACATGTGCGAATATTCT 59.074 33.333 9.11 0.00 41.89 2.40
2545 2576 8.006027 CAGTTACATACATGTGCGAATATTCTG 58.994 37.037 9.11 6.95 41.89 3.02
2546 2577 7.710907 AGTTACATACATGTGCGAATATTCTGT 59.289 33.333 9.11 12.01 41.89 3.41
2547 2578 8.974408 GTTACATACATGTGCGAATATTCTGTA 58.026 33.333 9.11 13.60 41.89 2.74
2548 2579 7.643528 ACATACATGTGCGAATATTCTGTAG 57.356 36.000 9.11 10.12 40.03 2.74
2549 2580 6.146184 ACATACATGTGCGAATATTCTGTAGC 59.854 38.462 9.11 9.53 40.03 3.58
2550 2581 3.809832 ACATGTGCGAATATTCTGTAGCC 59.190 43.478 13.45 4.79 0.00 3.93
2551 2582 3.819564 TGTGCGAATATTCTGTAGCCT 57.180 42.857 13.45 0.00 0.00 4.58
2552 2583 3.457234 TGTGCGAATATTCTGTAGCCTG 58.543 45.455 13.45 0.00 0.00 4.85
2553 2584 3.118775 TGTGCGAATATTCTGTAGCCTGT 60.119 43.478 13.45 0.00 0.00 4.00
2554 2585 3.871594 GTGCGAATATTCTGTAGCCTGTT 59.128 43.478 13.45 0.00 0.00 3.16
2555 2586 4.025647 GTGCGAATATTCTGTAGCCTGTTC 60.026 45.833 13.45 0.00 0.00 3.18
2556 2587 3.495001 GCGAATATTCTGTAGCCTGTTCC 59.505 47.826 13.45 0.00 0.00 3.62
2557 2588 4.693283 CGAATATTCTGTAGCCTGTTCCA 58.307 43.478 13.45 0.00 0.00 3.53
2558 2589 4.747108 CGAATATTCTGTAGCCTGTTCCAG 59.253 45.833 13.45 0.00 0.00 3.86
2559 2590 2.409948 ATTCTGTAGCCTGTTCCAGC 57.590 50.000 0.00 0.00 0.00 4.85
2560 2591 1.352083 TTCTGTAGCCTGTTCCAGCT 58.648 50.000 0.00 0.00 0.00 4.24
2561 2592 2.231716 TCTGTAGCCTGTTCCAGCTA 57.768 50.000 0.00 0.00 0.00 3.32
2562 2593 2.536066 TCTGTAGCCTGTTCCAGCTAA 58.464 47.619 0.00 0.00 0.00 3.09
2563 2594 2.497675 TCTGTAGCCTGTTCCAGCTAAG 59.502 50.000 0.00 0.00 0.00 2.18
2564 2595 2.234908 CTGTAGCCTGTTCCAGCTAAGT 59.765 50.000 0.00 0.00 0.00 2.24
2565 2596 2.637872 TGTAGCCTGTTCCAGCTAAGTT 59.362 45.455 0.00 0.00 0.00 2.66
2566 2597 2.481289 AGCCTGTTCCAGCTAAGTTC 57.519 50.000 0.00 0.00 0.00 3.01
2567 2598 1.699634 AGCCTGTTCCAGCTAAGTTCA 59.300 47.619 0.00 0.00 0.00 3.18
2568 2599 2.307098 AGCCTGTTCCAGCTAAGTTCAT 59.693 45.455 0.00 0.00 0.00 2.57
2569 2600 3.519510 AGCCTGTTCCAGCTAAGTTCATA 59.480 43.478 0.00 0.00 0.00 2.15
2570 2601 4.164988 AGCCTGTTCCAGCTAAGTTCATAT 59.835 41.667 0.00 0.00 0.00 1.78
2571 2602 5.366768 AGCCTGTTCCAGCTAAGTTCATATA 59.633 40.000 0.00 0.00 0.00 0.86
2572 2603 5.698545 GCCTGTTCCAGCTAAGTTCATATAG 59.301 44.000 0.00 0.00 0.00 1.31
2573 2604 6.463049 GCCTGTTCCAGCTAAGTTCATATAGA 60.463 42.308 0.00 0.00 0.00 1.98
2574 2605 7.675062 CCTGTTCCAGCTAAGTTCATATAGAT 58.325 38.462 0.00 0.00 0.00 1.98
2575 2606 8.153550 CCTGTTCCAGCTAAGTTCATATAGATT 58.846 37.037 0.00 0.00 0.00 2.40
2576 2607 8.893219 TGTTCCAGCTAAGTTCATATAGATTG 57.107 34.615 0.00 0.00 0.00 2.67
2577 2608 8.486210 TGTTCCAGCTAAGTTCATATAGATTGT 58.514 33.333 0.00 0.00 0.00 2.71
2578 2609 8.768955 GTTCCAGCTAAGTTCATATAGATTGTG 58.231 37.037 0.00 0.00 0.00 3.33
2579 2610 7.445121 TCCAGCTAAGTTCATATAGATTGTGG 58.555 38.462 0.00 0.00 0.00 4.17
2580 2611 6.148480 CCAGCTAAGTTCATATAGATTGTGGC 59.852 42.308 0.00 0.00 0.00 5.01
2581 2612 6.707608 CAGCTAAGTTCATATAGATTGTGGCA 59.292 38.462 0.00 0.00 0.00 4.92
2582 2613 7.227314 CAGCTAAGTTCATATAGATTGTGGCAA 59.773 37.037 0.00 0.00 0.00 4.52
2583 2614 7.443575 AGCTAAGTTCATATAGATTGTGGCAAG 59.556 37.037 0.00 0.00 0.00 4.01
2584 2615 7.442364 GCTAAGTTCATATAGATTGTGGCAAGA 59.558 37.037 0.00 0.00 0.00 3.02
2585 2616 7.559590 AAGTTCATATAGATTGTGGCAAGAC 57.440 36.000 0.00 0.00 0.00 3.01
2586 2617 6.653020 AGTTCATATAGATTGTGGCAAGACA 58.347 36.000 0.00 0.00 0.00 3.41
2587 2618 6.765036 AGTTCATATAGATTGTGGCAAGACAG 59.235 38.462 0.00 0.00 0.00 3.51
2588 2619 5.059161 TCATATAGATTGTGGCAAGACAGC 58.941 41.667 0.00 0.00 0.00 4.40
2589 2620 2.857186 TAGATTGTGGCAAGACAGCA 57.143 45.000 0.00 0.00 35.83 4.41
2590 2621 1.985473 AGATTGTGGCAAGACAGCAA 58.015 45.000 0.00 0.00 35.83 3.91
2591 2622 2.309613 AGATTGTGGCAAGACAGCAAA 58.690 42.857 0.00 0.00 35.83 3.68
2592 2623 2.694628 AGATTGTGGCAAGACAGCAAAA 59.305 40.909 0.00 0.00 35.83 2.44
2593 2624 3.322828 AGATTGTGGCAAGACAGCAAAAT 59.677 39.130 0.00 0.00 35.83 1.82
2594 2625 4.523943 AGATTGTGGCAAGACAGCAAAATA 59.476 37.500 0.00 0.00 35.83 1.40
2595 2626 3.921119 TGTGGCAAGACAGCAAAATAG 57.079 42.857 0.00 0.00 35.83 1.73
2596 2627 3.485394 TGTGGCAAGACAGCAAAATAGA 58.515 40.909 0.00 0.00 35.83 1.98
2597 2628 3.888323 TGTGGCAAGACAGCAAAATAGAA 59.112 39.130 0.00 0.00 35.83 2.10
2598 2629 4.523943 TGTGGCAAGACAGCAAAATAGAAT 59.476 37.500 0.00 0.00 35.83 2.40
2599 2630 4.860907 GTGGCAAGACAGCAAAATAGAATG 59.139 41.667 0.00 0.00 35.83 2.67
2600 2631 4.523943 TGGCAAGACAGCAAAATAGAATGT 59.476 37.500 0.00 0.00 35.83 2.71
2601 2632 5.010922 TGGCAAGACAGCAAAATAGAATGTT 59.989 36.000 0.00 0.00 35.83 2.71
2602 2633 5.574443 GGCAAGACAGCAAAATAGAATGTTC 59.426 40.000 0.00 0.00 35.83 3.18
2603 2634 5.574443 GCAAGACAGCAAAATAGAATGTTCC 59.426 40.000 0.00 0.00 0.00 3.62
2604 2635 6.680810 CAAGACAGCAAAATAGAATGTTCCA 58.319 36.000 0.00 0.00 0.00 3.53
2605 2636 6.899393 AGACAGCAAAATAGAATGTTCCAA 57.101 33.333 0.00 0.00 0.00 3.53
2606 2637 7.288810 AGACAGCAAAATAGAATGTTCCAAA 57.711 32.000 0.00 0.00 0.00 3.28
2607 2638 7.725251 AGACAGCAAAATAGAATGTTCCAAAA 58.275 30.769 0.00 0.00 0.00 2.44
2608 2639 8.370182 AGACAGCAAAATAGAATGTTCCAAAAT 58.630 29.630 0.00 0.00 0.00 1.82
2609 2640 8.907222 ACAGCAAAATAGAATGTTCCAAAATT 57.093 26.923 0.00 0.00 0.00 1.82
2610 2641 9.341078 ACAGCAAAATAGAATGTTCCAAAATTT 57.659 25.926 0.00 0.00 0.00 1.82
2611 2642 9.601971 CAGCAAAATAGAATGTTCCAAAATTTG 57.398 29.630 0.00 0.00 0.00 2.32
2640 2671 3.456663 GCTGATTGCATGCAGATCG 57.543 52.632 21.50 19.37 42.31 3.69
2641 2672 0.040336 GCTGATTGCATGCAGATCGG 60.040 55.000 28.72 28.72 42.31 4.18
2642 2673 1.589803 CTGATTGCATGCAGATCGGA 58.410 50.000 28.95 15.22 34.06 4.55
2643 2674 1.531578 CTGATTGCATGCAGATCGGAG 59.468 52.381 28.95 20.38 34.06 4.63
2644 2675 1.139455 TGATTGCATGCAGATCGGAGA 59.861 47.619 21.50 3.38 45.75 3.71
2645 2676 2.216046 GATTGCATGCAGATCGGAGAA 58.784 47.619 21.50 2.55 43.58 2.87
2646 2677 1.660167 TTGCATGCAGATCGGAGAAG 58.340 50.000 21.50 0.00 43.58 2.85
2647 2678 0.538584 TGCATGCAGATCGGAGAAGT 59.461 50.000 18.46 0.00 43.58 3.01
2648 2679 0.935898 GCATGCAGATCGGAGAAGTG 59.064 55.000 14.21 0.00 43.58 3.16
2649 2680 1.579698 CATGCAGATCGGAGAAGTGG 58.420 55.000 0.00 0.00 43.58 4.00
2650 2681 0.467384 ATGCAGATCGGAGAAGTGGG 59.533 55.000 0.00 0.00 43.58 4.61
2651 2682 0.904865 TGCAGATCGGAGAAGTGGGT 60.905 55.000 0.00 0.00 43.58 4.51
2652 2683 0.250513 GCAGATCGGAGAAGTGGGTT 59.749 55.000 0.00 0.00 43.58 4.11
2653 2684 2.009042 GCAGATCGGAGAAGTGGGTTG 61.009 57.143 0.00 0.00 43.58 3.77
2654 2685 0.250513 AGATCGGAGAAGTGGGTTGC 59.749 55.000 0.00 0.00 43.58 4.17
2655 2686 0.036388 GATCGGAGAAGTGGGTTGCA 60.036 55.000 0.00 0.00 43.58 4.08
2656 2687 0.620556 ATCGGAGAAGTGGGTTGCAT 59.379 50.000 0.00 0.00 43.58 3.96
2657 2688 0.321564 TCGGAGAAGTGGGTTGCATG 60.322 55.000 0.00 0.00 0.00 4.06
2658 2689 0.321564 CGGAGAAGTGGGTTGCATGA 60.322 55.000 0.00 0.00 0.00 3.07
2659 2690 1.679944 CGGAGAAGTGGGTTGCATGAT 60.680 52.381 0.00 0.00 0.00 2.45
2660 2691 1.747355 GGAGAAGTGGGTTGCATGATG 59.253 52.381 0.00 0.00 0.00 3.07
2661 2692 1.747355 GAGAAGTGGGTTGCATGATGG 59.253 52.381 0.00 0.00 0.00 3.51
2662 2693 0.819582 GAAGTGGGTTGCATGATGGG 59.180 55.000 0.00 0.00 0.00 4.00
2663 2694 1.259840 AAGTGGGTTGCATGATGGGC 61.260 55.000 0.00 0.00 0.00 5.36
2664 2695 1.683365 GTGGGTTGCATGATGGGCT 60.683 57.895 0.00 0.00 0.00 5.19
2665 2696 1.683025 TGGGTTGCATGATGGGCTG 60.683 57.895 0.00 0.00 0.00 4.85
2666 2697 1.683365 GGGTTGCATGATGGGCTGT 60.683 57.895 0.00 0.00 0.00 4.40
2667 2698 1.514087 GGTTGCATGATGGGCTGTG 59.486 57.895 0.00 0.00 0.00 3.66
2668 2699 1.252904 GGTTGCATGATGGGCTGTGT 61.253 55.000 0.00 0.00 0.00 3.72
2669 2700 1.462616 GTTGCATGATGGGCTGTGTA 58.537 50.000 0.00 0.00 0.00 2.90
2670 2701 1.133025 GTTGCATGATGGGCTGTGTAC 59.867 52.381 0.00 0.00 0.00 2.90
2671 2702 0.327591 TGCATGATGGGCTGTGTACA 59.672 50.000 0.00 0.00 0.00 2.90
2672 2703 1.019673 GCATGATGGGCTGTGTACAG 58.980 55.000 7.64 7.64 46.40 2.74
2673 2704 1.671979 CATGATGGGCTGTGTACAGG 58.328 55.000 13.41 0.00 43.94 4.00
2674 2705 1.065199 CATGATGGGCTGTGTACAGGT 60.065 52.381 13.41 0.00 43.94 4.00
2675 2706 0.613260 TGATGGGCTGTGTACAGGTC 59.387 55.000 13.41 0.00 43.94 3.85
2676 2707 0.905357 GATGGGCTGTGTACAGGTCT 59.095 55.000 13.41 0.00 43.94 3.85
2677 2708 2.108168 GATGGGCTGTGTACAGGTCTA 58.892 52.381 13.41 0.00 43.94 2.59
2678 2709 2.018355 TGGGCTGTGTACAGGTCTAA 57.982 50.000 13.41 0.00 43.94 2.10
2679 2710 2.331166 TGGGCTGTGTACAGGTCTAAA 58.669 47.619 13.41 0.00 43.94 1.85
2680 2711 2.910319 TGGGCTGTGTACAGGTCTAAAT 59.090 45.455 13.41 0.00 43.94 1.40
2681 2712 4.098155 TGGGCTGTGTACAGGTCTAAATA 58.902 43.478 13.41 0.00 43.94 1.40
2682 2713 4.161565 TGGGCTGTGTACAGGTCTAAATAG 59.838 45.833 13.41 0.00 43.94 1.73
2683 2714 4.443034 GGGCTGTGTACAGGTCTAAATAGG 60.443 50.000 13.41 0.00 43.94 2.57
2684 2715 4.161754 GGCTGTGTACAGGTCTAAATAGGT 59.838 45.833 13.41 0.00 43.94 3.08
2685 2716 5.361857 GGCTGTGTACAGGTCTAAATAGGTA 59.638 44.000 13.41 0.00 43.94 3.08
2686 2717 6.461231 GGCTGTGTACAGGTCTAAATAGGTAG 60.461 46.154 13.41 0.00 43.94 3.18
2687 2718 6.461110 TGTGTACAGGTCTAAATAGGTAGC 57.539 41.667 0.00 0.00 0.00 3.58
2688 2719 6.192773 TGTGTACAGGTCTAAATAGGTAGCT 58.807 40.000 0.00 0.00 0.00 3.32
2689 2720 6.096423 TGTGTACAGGTCTAAATAGGTAGCTG 59.904 42.308 4.27 0.00 41.88 4.24
2691 2722 5.855740 ACAGGTCTAAATAGGTAGCTGTC 57.144 43.478 4.27 0.00 44.86 3.51
2692 2723 4.338682 ACAGGTCTAAATAGGTAGCTGTCG 59.661 45.833 4.27 0.00 44.86 4.35
2693 2724 3.890147 AGGTCTAAATAGGTAGCTGTCGG 59.110 47.826 4.27 0.00 0.00 4.79
2694 2725 3.887716 GGTCTAAATAGGTAGCTGTCGGA 59.112 47.826 4.27 0.00 0.00 4.55
2695 2726 4.523558 GGTCTAAATAGGTAGCTGTCGGAT 59.476 45.833 4.27 0.00 0.00 4.18
2696 2727 5.010820 GGTCTAAATAGGTAGCTGTCGGATT 59.989 44.000 4.27 0.00 0.00 3.01
2697 2728 6.462628 GGTCTAAATAGGTAGCTGTCGGATTT 60.463 42.308 4.27 4.90 0.00 2.17
2698 2729 6.985059 GTCTAAATAGGTAGCTGTCGGATTTT 59.015 38.462 4.27 0.00 0.00 1.82
2699 2730 6.984474 TCTAAATAGGTAGCTGTCGGATTTTG 59.016 38.462 4.27 3.84 0.00 2.44
2700 2731 4.755266 ATAGGTAGCTGTCGGATTTTGT 57.245 40.909 4.27 0.00 0.00 2.83
2701 2732 2.973945 AGGTAGCTGTCGGATTTTGTC 58.026 47.619 0.00 0.00 0.00 3.18
2702 2733 1.659098 GGTAGCTGTCGGATTTTGTCG 59.341 52.381 0.00 0.00 0.00 4.35
2703 2734 1.659098 GTAGCTGTCGGATTTTGTCGG 59.341 52.381 0.00 0.00 0.00 4.79
2704 2735 0.320374 AGCTGTCGGATTTTGTCGGA 59.680 50.000 0.00 0.00 34.21 4.55
2705 2736 1.066143 AGCTGTCGGATTTTGTCGGAT 60.066 47.619 0.00 0.00 38.29 4.18
2706 2737 1.062587 GCTGTCGGATTTTGTCGGATG 59.937 52.381 0.00 0.00 38.29 3.51
2707 2738 2.346803 CTGTCGGATTTTGTCGGATGT 58.653 47.619 0.00 0.00 38.29 3.06
2708 2739 3.517602 CTGTCGGATTTTGTCGGATGTA 58.482 45.455 0.00 0.00 38.29 2.29
2709 2740 3.517602 TGTCGGATTTTGTCGGATGTAG 58.482 45.455 0.00 0.00 38.29 2.74
2710 2741 2.284417 GTCGGATTTTGTCGGATGTAGC 59.716 50.000 0.00 0.00 38.29 3.58
2711 2742 1.257936 CGGATTTTGTCGGATGTAGCG 59.742 52.381 0.00 0.00 0.00 4.26
2712 2743 2.546778 GGATTTTGTCGGATGTAGCGA 58.453 47.619 0.00 0.00 0.00 4.93
2713 2744 2.933906 GGATTTTGTCGGATGTAGCGAA 59.066 45.455 0.00 0.00 0.00 4.70
2714 2745 3.001330 GGATTTTGTCGGATGTAGCGAAG 59.999 47.826 0.00 0.00 0.00 3.79
2715 2746 2.736144 TTTGTCGGATGTAGCGAAGT 57.264 45.000 0.00 0.00 0.00 3.01
2716 2747 2.736144 TTGTCGGATGTAGCGAAGTT 57.264 45.000 0.00 0.00 0.00 2.66
2717 2748 3.853831 TTGTCGGATGTAGCGAAGTTA 57.146 42.857 0.00 0.00 0.00 2.24
2718 2749 3.853831 TGTCGGATGTAGCGAAGTTAA 57.146 42.857 0.00 0.00 0.00 2.01
2719 2750 4.177165 TGTCGGATGTAGCGAAGTTAAA 57.823 40.909 0.00 0.00 0.00 1.52
2720 2751 4.751060 TGTCGGATGTAGCGAAGTTAAAT 58.249 39.130 0.00 0.00 0.00 1.40
2721 2752 4.802039 TGTCGGATGTAGCGAAGTTAAATC 59.198 41.667 0.00 0.00 37.24 2.17
2722 2753 4.802039 GTCGGATGTAGCGAAGTTAAATCA 59.198 41.667 0.00 0.00 39.32 2.57
2723 2754 5.041287 TCGGATGTAGCGAAGTTAAATCAG 58.959 41.667 0.00 0.00 39.32 2.90
2724 2755 5.041287 CGGATGTAGCGAAGTTAAATCAGA 58.959 41.667 0.00 0.00 39.32 3.27
2725 2756 5.692204 CGGATGTAGCGAAGTTAAATCAGAT 59.308 40.000 0.00 0.00 39.32 2.90
2726 2757 6.201044 CGGATGTAGCGAAGTTAAATCAGATT 59.799 38.462 0.00 0.00 39.32 2.40
2727 2758 7.254455 CGGATGTAGCGAAGTTAAATCAGATTT 60.254 37.037 13.06 13.06 39.32 2.17
2728 2759 7.852945 GGATGTAGCGAAGTTAAATCAGATTTG 59.147 37.037 17.38 2.04 39.32 2.32
2729 2760 7.667043 TGTAGCGAAGTTAAATCAGATTTGT 57.333 32.000 17.38 0.78 33.82 2.83
2730 2761 7.739295 TGTAGCGAAGTTAAATCAGATTTGTC 58.261 34.615 17.38 10.32 33.82 3.18
2731 2762 7.602644 TGTAGCGAAGTTAAATCAGATTTGTCT 59.397 33.333 17.38 12.11 33.82 3.41
2732 2763 7.440523 AGCGAAGTTAAATCAGATTTGTCTT 57.559 32.000 17.38 18.23 33.82 3.01
2733 2764 7.522374 AGCGAAGTTAAATCAGATTTGTCTTC 58.478 34.615 25.52 25.52 38.43 2.87
2734 2765 6.743172 GCGAAGTTAAATCAGATTTGTCTTCC 59.257 38.462 27.11 21.47 38.49 3.46
2735 2766 7.361286 GCGAAGTTAAATCAGATTTGTCTTCCT 60.361 37.037 27.11 12.43 38.49 3.36
2736 2767 9.151471 CGAAGTTAAATCAGATTTGTCTTCCTA 57.849 33.333 27.11 7.51 38.49 2.94
2739 2770 9.883142 AGTTAAATCAGATTTGTCTTCCTAGAG 57.117 33.333 17.38 0.00 33.82 2.43
2740 2771 9.660180 GTTAAATCAGATTTGTCTTCCTAGAGT 57.340 33.333 17.38 0.00 33.82 3.24
2742 2773 8.558973 AAATCAGATTTGTCTTCCTAGAGTTG 57.441 34.615 7.64 0.00 0.00 3.16
2743 2774 6.042638 TCAGATTTGTCTTCCTAGAGTTGG 57.957 41.667 0.00 0.00 0.00 3.77
2744 2775 5.544176 TCAGATTTGTCTTCCTAGAGTTGGT 59.456 40.000 0.00 0.00 0.00 3.67
2745 2776 5.872070 CAGATTTGTCTTCCTAGAGTTGGTC 59.128 44.000 0.00 0.00 0.00 4.02
2746 2777 3.936372 TTGTCTTCCTAGAGTTGGTCG 57.064 47.619 0.00 0.00 0.00 4.79
2747 2778 2.168496 TGTCTTCCTAGAGTTGGTCGG 58.832 52.381 0.00 0.00 0.00 4.79
2748 2779 1.477295 GTCTTCCTAGAGTTGGTCGGG 59.523 57.143 0.00 0.00 0.00 5.14
2749 2780 1.076677 TCTTCCTAGAGTTGGTCGGGT 59.923 52.381 0.00 0.00 0.00 5.28
2750 2781 1.204941 CTTCCTAGAGTTGGTCGGGTG 59.795 57.143 0.00 0.00 0.00 4.61
2751 2782 0.406750 TCCTAGAGTTGGTCGGGTGA 59.593 55.000 0.00 0.00 0.00 4.02
2752 2783 0.818296 CCTAGAGTTGGTCGGGTGAG 59.182 60.000 0.00 0.00 0.00 3.51
2753 2784 1.616187 CCTAGAGTTGGTCGGGTGAGA 60.616 57.143 0.00 0.00 0.00 3.27
2754 2785 2.379972 CTAGAGTTGGTCGGGTGAGAT 58.620 52.381 0.00 0.00 0.00 2.75
2755 2786 1.187087 AGAGTTGGTCGGGTGAGATC 58.813 55.000 0.00 0.00 0.00 2.75
2756 2787 1.187087 GAGTTGGTCGGGTGAGATCT 58.813 55.000 0.00 0.00 0.00 2.75
2757 2788 0.898320 AGTTGGTCGGGTGAGATCTG 59.102 55.000 0.00 0.00 0.00 2.90
2758 2789 0.741221 GTTGGTCGGGTGAGATCTGC 60.741 60.000 0.00 0.00 0.00 4.26
2759 2790 2.105128 GGTCGGGTGAGATCTGCG 59.895 66.667 0.00 0.00 0.00 5.18
2760 2791 2.711922 GGTCGGGTGAGATCTGCGT 61.712 63.158 0.00 0.00 0.00 5.24
2761 2792 1.517257 GTCGGGTGAGATCTGCGTG 60.517 63.158 0.00 0.00 0.00 5.34
2762 2793 1.977009 TCGGGTGAGATCTGCGTGT 60.977 57.895 0.00 0.00 0.00 4.49
2763 2794 1.517257 CGGGTGAGATCTGCGTGTC 60.517 63.158 0.00 0.00 0.00 3.67
2764 2795 1.517257 GGGTGAGATCTGCGTGTCG 60.517 63.158 0.00 0.00 0.00 4.35
2765 2796 1.517257 GGTGAGATCTGCGTGTCGG 60.517 63.158 0.00 0.00 0.00 4.79
2766 2797 1.213013 GTGAGATCTGCGTGTCGGT 59.787 57.895 0.00 0.00 0.00 4.69
2767 2798 0.388649 GTGAGATCTGCGTGTCGGTT 60.389 55.000 0.00 0.00 0.00 4.44
2768 2799 0.388520 TGAGATCTGCGTGTCGGTTG 60.389 55.000 0.00 0.00 0.00 3.77
2769 2800 1.078759 GAGATCTGCGTGTCGGTTGG 61.079 60.000 0.00 0.00 0.00 3.77
2770 2801 2.047274 ATCTGCGTGTCGGTTGGG 60.047 61.111 0.00 0.00 0.00 4.12
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
396 397 6.019779 TCCACCGTCAAAAATTCCATAAAG 57.980 37.500 0.00 0.00 0.00 1.85
750 756 5.350640 CCGAGTATTAGACAAACCTTTCACC 59.649 44.000 0.00 0.00 0.00 4.02
1102 1110 4.136796 TCTATGCCCATGTCAATTGCTAC 58.863 43.478 0.00 0.00 0.00 3.58
1104 1112 3.301794 TCTATGCCCATGTCAATTGCT 57.698 42.857 0.00 0.00 0.00 3.91
1186 1194 7.418337 TCCCAGCTTTTAGAACTTTTTCTTT 57.582 32.000 0.00 0.00 39.17 2.52
1192 1200 3.574396 GCCTTCCCAGCTTTTAGAACTTT 59.426 43.478 0.00 0.00 0.00 2.66
1208 1216 5.729974 ATAATTAACTTCGAACGCCTTCC 57.270 39.130 0.00 0.00 0.00 3.46
1270 1278 8.964476 AACACTTTGAGTTCTTTGAATCTAGA 57.036 30.769 0.00 0.00 0.00 2.43
1397 1405 4.022068 ACTCAACATCGCATGAACCATTTT 60.022 37.500 0.00 0.00 0.00 1.82
1593 1602 7.425606 ACAATTTCAACTTCGAAAAGCTATGT 58.574 30.769 0.00 0.00 38.33 2.29
1595 1604 9.959749 TTAACAATTTCAACTTCGAAAAGCTAT 57.040 25.926 0.00 0.00 38.33 2.97
1647 1656 4.578601 CGAGACCATTTAATCGTTCTTGC 58.421 43.478 0.00 0.00 0.00 4.01
1819 1828 8.579863 CAGGAAAGTAACTCAATTCTTCCAAAT 58.420 33.333 0.00 0.00 0.00 2.32
1838 1847 4.207165 TCCAAAGTTCTTCACCAGGAAAG 58.793 43.478 0.00 0.00 34.44 2.62
1840 1849 3.202151 ACTCCAAAGTTCTTCACCAGGAA 59.798 43.478 0.00 0.00 28.74 3.36
1868 1877 1.220518 TCCTCCCCAATTGGCCATGA 61.221 55.000 19.75 9.63 0.00 3.07
1955 1968 3.801114 AAAGTTCCTGTCAAAACTGGC 57.199 42.857 2.00 0.00 42.61 4.85
1994 2007 8.686334 GCATTCCTAAATTTGAATGGAGACTTA 58.314 33.333 22.75 5.06 45.05 2.24
2272 2303 7.201367 GCTAAGAAAAACGTGTTTAGTTGCAAA 60.201 33.333 3.06 0.00 31.63 3.68
2273 2304 6.251801 GCTAAGAAAAACGTGTTTAGTTGCAA 59.748 34.615 3.06 0.00 31.63 4.08
2274 2305 5.740099 GCTAAGAAAAACGTGTTTAGTTGCA 59.260 36.000 3.06 0.00 31.63 4.08
2275 2306 5.969435 AGCTAAGAAAAACGTGTTTAGTTGC 59.031 36.000 3.06 7.66 31.63 4.17
2276 2307 7.184106 TGAGCTAAGAAAAACGTGTTTAGTTG 58.816 34.615 3.06 0.00 31.63 3.16
2277 2308 7.311364 TGAGCTAAGAAAAACGTGTTTAGTT 57.689 32.000 3.06 3.78 31.63 2.24
2278 2309 6.913873 TGAGCTAAGAAAAACGTGTTTAGT 57.086 33.333 3.06 0.00 31.63 2.24
2279 2310 7.407337 AGTTGAGCTAAGAAAAACGTGTTTAG 58.593 34.615 3.06 0.00 31.63 1.85
2280 2311 7.064847 TGAGTTGAGCTAAGAAAAACGTGTTTA 59.935 33.333 3.06 0.00 31.63 2.01
2281 2312 6.128117 TGAGTTGAGCTAAGAAAAACGTGTTT 60.128 34.615 2.60 2.60 0.00 2.83
2282 2313 5.353123 TGAGTTGAGCTAAGAAAAACGTGTT 59.647 36.000 0.00 0.00 0.00 3.32
2283 2314 4.873827 TGAGTTGAGCTAAGAAAAACGTGT 59.126 37.500 0.00 0.00 0.00 4.49
2284 2315 5.403897 TGAGTTGAGCTAAGAAAAACGTG 57.596 39.130 0.00 0.00 0.00 4.49
2285 2316 4.024809 GCTGAGTTGAGCTAAGAAAAACGT 60.025 41.667 0.00 0.00 35.95 3.99
2286 2317 4.458708 GCTGAGTTGAGCTAAGAAAAACG 58.541 43.478 0.00 0.00 35.95 3.60
2287 2318 4.517075 AGGCTGAGTTGAGCTAAGAAAAAC 59.483 41.667 0.00 0.00 39.11 2.43
2288 2319 4.516698 CAGGCTGAGTTGAGCTAAGAAAAA 59.483 41.667 9.42 0.00 39.11 1.94
2289 2320 4.067896 CAGGCTGAGTTGAGCTAAGAAAA 58.932 43.478 9.42 0.00 39.11 2.29
2290 2321 3.557898 CCAGGCTGAGTTGAGCTAAGAAA 60.558 47.826 17.94 0.00 39.11 2.52
2291 2322 2.027745 CCAGGCTGAGTTGAGCTAAGAA 60.028 50.000 17.94 0.00 39.11 2.52
2292 2323 1.552337 CCAGGCTGAGTTGAGCTAAGA 59.448 52.381 17.94 0.00 39.11 2.10
2293 2324 1.277557 ACCAGGCTGAGTTGAGCTAAG 59.722 52.381 17.94 0.00 39.11 2.18
2294 2325 1.352083 ACCAGGCTGAGTTGAGCTAA 58.648 50.000 17.94 0.00 39.11 3.09
2295 2326 1.002430 CAACCAGGCTGAGTTGAGCTA 59.998 52.381 29.37 0.00 44.93 3.32
2296 2327 0.250640 CAACCAGGCTGAGTTGAGCT 60.251 55.000 29.37 7.07 44.93 4.09
2297 2328 1.239968 CCAACCAGGCTGAGTTGAGC 61.240 60.000 32.29 0.00 44.93 4.26
2298 2329 0.397941 TCCAACCAGGCTGAGTTGAG 59.602 55.000 32.29 25.30 44.93 3.02
2299 2330 0.397941 CTCCAACCAGGCTGAGTTGA 59.602 55.000 32.29 22.61 44.93 3.18
2300 2331 0.607489 CCTCCAACCAGGCTGAGTTG 60.607 60.000 27.69 27.69 42.41 3.16
2301 2332 1.062488 ACCTCCAACCAGGCTGAGTT 61.062 55.000 17.94 15.19 36.98 3.01
2302 2333 0.178903 TACCTCCAACCAGGCTGAGT 60.179 55.000 17.94 9.51 36.98 3.41
2303 2334 0.984230 TTACCTCCAACCAGGCTGAG 59.016 55.000 17.94 8.80 36.98 3.35
2304 2335 1.281867 CATTACCTCCAACCAGGCTGA 59.718 52.381 17.94 0.00 36.98 4.26
2305 2336 1.755179 CATTACCTCCAACCAGGCTG 58.245 55.000 7.75 7.75 36.98 4.85
2306 2337 0.034089 GCATTACCTCCAACCAGGCT 60.034 55.000 0.00 0.00 36.98 4.58
2307 2338 0.323360 TGCATTACCTCCAACCAGGC 60.323 55.000 0.00 0.00 36.98 4.85
2308 2339 1.683011 CCTGCATTACCTCCAACCAGG 60.683 57.143 0.00 0.00 39.80 4.45
2309 2340 1.755179 CCTGCATTACCTCCAACCAG 58.245 55.000 0.00 0.00 0.00 4.00
2310 2341 0.323360 GCCTGCATTACCTCCAACCA 60.323 55.000 0.00 0.00 0.00 3.67
2311 2342 0.323360 TGCCTGCATTACCTCCAACC 60.323 55.000 0.00 0.00 0.00 3.77
2312 2343 1.202348 GTTGCCTGCATTACCTCCAAC 59.798 52.381 0.00 0.00 0.00 3.77
2313 2344 1.544724 GTTGCCTGCATTACCTCCAA 58.455 50.000 0.00 0.00 0.00 3.53
2314 2345 0.323360 GGTTGCCTGCATTACCTCCA 60.323 55.000 5.87 0.00 0.00 3.86
2315 2346 0.323360 TGGTTGCCTGCATTACCTCC 60.323 55.000 12.77 2.29 30.39 4.30
2316 2347 1.544724 TTGGTTGCCTGCATTACCTC 58.455 50.000 12.77 0.00 30.39 3.85
2317 2348 2.236489 ATTGGTTGCCTGCATTACCT 57.764 45.000 12.77 0.00 30.39 3.08
2318 2349 4.370917 CATAATTGGTTGCCTGCATTACC 58.629 43.478 6.12 6.12 0.00 2.85
2319 2350 3.803778 GCATAATTGGTTGCCTGCATTAC 59.196 43.478 0.00 0.00 32.66 1.89
2320 2351 4.057406 GCATAATTGGTTGCCTGCATTA 57.943 40.909 0.00 0.00 32.66 1.90
2321 2352 2.908916 GCATAATTGGTTGCCTGCATT 58.091 42.857 0.00 0.00 32.66 3.56
2322 2353 2.607631 GCATAATTGGTTGCCTGCAT 57.392 45.000 0.00 0.00 32.66 3.96
2328 2359 0.752658 GGGAGGGCATAATTGGTTGC 59.247 55.000 0.00 0.00 38.14 4.17
2329 2360 1.032014 CGGGAGGGCATAATTGGTTG 58.968 55.000 0.00 0.00 0.00 3.77
2330 2361 0.755327 GCGGGAGGGCATAATTGGTT 60.755 55.000 0.00 0.00 0.00 3.67
2331 2362 1.152756 GCGGGAGGGCATAATTGGT 60.153 57.895 0.00 0.00 0.00 3.67
2332 2363 1.151450 AGCGGGAGGGCATAATTGG 59.849 57.895 0.00 0.00 34.64 3.16
2333 2364 0.466189 ACAGCGGGAGGGCATAATTG 60.466 55.000 0.00 0.00 34.64 2.32
2334 2365 0.466189 CACAGCGGGAGGGCATAATT 60.466 55.000 0.00 0.00 34.64 1.40
2335 2366 1.149174 CACAGCGGGAGGGCATAAT 59.851 57.895 0.00 0.00 34.64 1.28
2336 2367 2.589540 CACAGCGGGAGGGCATAA 59.410 61.111 0.00 0.00 34.64 1.90
2337 2368 3.479203 CCACAGCGGGAGGGCATA 61.479 66.667 0.00 0.00 34.64 3.14
2341 2372 4.722700 CCAACCACAGCGGGAGGG 62.723 72.222 3.00 0.00 40.22 4.30
2342 2373 3.901797 GACCAACCACAGCGGGAGG 62.902 68.421 0.00 0.00 40.22 4.30
2343 2374 2.358737 GACCAACCACAGCGGGAG 60.359 66.667 0.00 0.00 40.22 4.30
2344 2375 4.308458 CGACCAACCACAGCGGGA 62.308 66.667 0.00 0.00 40.22 5.14
2349 2380 3.041940 GACGCCGACCAACCACAG 61.042 66.667 0.00 0.00 0.00 3.66
2350 2381 4.953868 CGACGCCGACCAACCACA 62.954 66.667 0.00 0.00 38.22 4.17
2351 2382 4.955774 ACGACGCCGACCAACCAC 62.956 66.667 0.00 0.00 39.50 4.16
2352 2383 4.953868 CACGACGCCGACCAACCA 62.954 66.667 0.00 0.00 39.50 3.67
2367 2398 3.310860 ATGTTCGACGGGAGGGCAC 62.311 63.158 0.00 0.00 0.00 5.01
2368 2399 3.000819 ATGTTCGACGGGAGGGCA 61.001 61.111 0.00 0.00 0.00 5.36
2369 2400 2.511600 CATGTTCGACGGGAGGGC 60.512 66.667 0.00 0.00 0.00 5.19
2370 2401 2.186903 CCATGTTCGACGGGAGGG 59.813 66.667 0.00 0.00 0.00 4.30
2371 2402 2.511600 GCCATGTTCGACGGGAGG 60.512 66.667 0.00 0.00 0.00 4.30
2372 2403 2.885644 CGCCATGTTCGACGGGAG 60.886 66.667 0.00 0.00 0.00 4.30
2376 2407 3.853330 CTGGCGCCATGTTCGACG 61.853 66.667 32.87 12.15 37.89 5.12
2377 2408 3.499737 CCTGGCGCCATGTTCGAC 61.500 66.667 32.87 6.19 35.09 4.20
2378 2409 4.776322 CCCTGGCGCCATGTTCGA 62.776 66.667 32.87 4.54 0.00 3.71
2394 2425 3.181465 CCATGTATATCTATGGGTCGGCC 60.181 52.174 0.00 0.00 40.11 6.13
2395 2426 3.741388 GCCATGTATATCTATGGGTCGGC 60.741 52.174 15.98 0.00 43.23 5.54
2396 2427 3.490933 CGCCATGTATATCTATGGGTCGG 60.491 52.174 15.98 0.00 43.23 4.79
2397 2428 3.706698 CGCCATGTATATCTATGGGTCG 58.293 50.000 15.98 10.19 43.23 4.79
2398 2429 3.458189 GCGCCATGTATATCTATGGGTC 58.542 50.000 15.98 4.11 43.23 4.46
2399 2430 2.170607 GGCGCCATGTATATCTATGGGT 59.829 50.000 24.80 0.00 43.23 4.51
2400 2431 2.170397 TGGCGCCATGTATATCTATGGG 59.830 50.000 29.03 9.61 43.23 4.00
2401 2432 3.541996 TGGCGCCATGTATATCTATGG 57.458 47.619 29.03 11.87 45.28 2.74
2426 2457 4.803426 CTGCGAGGAGGGCACGAC 62.803 72.222 0.00 0.00 36.24 4.34
2427 2458 3.931190 TACTGCGAGGAGGGCACGA 62.931 63.158 0.00 0.00 36.24 4.35
2428 2459 2.685387 GATACTGCGAGGAGGGCACG 62.685 65.000 0.00 0.00 36.24 5.34
2429 2460 1.068250 GATACTGCGAGGAGGGCAC 59.932 63.158 0.00 0.00 36.24 5.01
2430 2461 1.381191 TGATACTGCGAGGAGGGCA 60.381 57.895 0.00 0.00 38.92 5.36
2431 2462 1.365633 CTGATACTGCGAGGAGGGC 59.634 63.158 0.00 0.00 0.00 5.19
2432 2463 0.757188 ACCTGATACTGCGAGGAGGG 60.757 60.000 0.00 0.00 0.00 4.30
2433 2464 0.671251 GACCTGATACTGCGAGGAGG 59.329 60.000 0.00 0.00 0.00 4.30
2434 2465 1.336440 CAGACCTGATACTGCGAGGAG 59.664 57.143 0.00 0.00 0.00 3.69
2435 2466 1.393603 CAGACCTGATACTGCGAGGA 58.606 55.000 0.00 0.00 0.00 3.71
2436 2467 0.387202 CCAGACCTGATACTGCGAGG 59.613 60.000 0.00 0.00 33.40 4.63
2437 2468 1.107114 ACCAGACCTGATACTGCGAG 58.893 55.000 0.00 0.00 33.40 5.03
2438 2469 0.817654 CACCAGACCTGATACTGCGA 59.182 55.000 0.00 0.00 33.40 5.10
2439 2470 0.179100 CCACCAGACCTGATACTGCG 60.179 60.000 0.00 0.00 33.40 5.18
2440 2471 1.195115 TCCACCAGACCTGATACTGC 58.805 55.000 0.00 0.00 33.40 4.40
2441 2472 2.419297 GCTTCCACCAGACCTGATACTG 60.419 54.545 0.00 0.00 0.00 2.74
2442 2473 1.834263 GCTTCCACCAGACCTGATACT 59.166 52.381 0.00 0.00 0.00 2.12
2443 2474 1.834263 AGCTTCCACCAGACCTGATAC 59.166 52.381 0.00 0.00 0.00 2.24
2444 2475 2.111384 GAGCTTCCACCAGACCTGATA 58.889 52.381 0.00 0.00 0.00 2.15
2445 2476 0.908198 GAGCTTCCACCAGACCTGAT 59.092 55.000 0.00 0.00 0.00 2.90
2446 2477 1.194781 GGAGCTTCCACCAGACCTGA 61.195 60.000 0.00 0.00 36.28 3.86
2447 2478 1.298014 GGAGCTTCCACCAGACCTG 59.702 63.158 0.00 0.00 36.28 4.00
2448 2479 2.286523 CGGAGCTTCCACCAGACCT 61.287 63.158 0.00 0.00 35.91 3.85
2449 2480 2.266055 CGGAGCTTCCACCAGACC 59.734 66.667 0.00 0.00 35.91 3.85
2462 2493 3.121030 CGGCCACAAGAAGCGGAG 61.121 66.667 2.24 0.00 0.00 4.63
2466 2497 4.389576 CACGCGGCCACAAGAAGC 62.390 66.667 12.47 0.00 0.00 3.86
2467 2498 2.972505 ACACGCGGCCACAAGAAG 60.973 61.111 12.47 0.00 0.00 2.85
2468 2499 3.276091 CACACGCGGCCACAAGAA 61.276 61.111 12.47 0.00 0.00 2.52
2469 2500 4.539083 ACACACGCGGCCACAAGA 62.539 61.111 12.47 0.00 0.00 3.02
2470 2501 4.012895 GACACACGCGGCCACAAG 62.013 66.667 12.47 0.00 0.00 3.16
2471 2502 4.539083 AGACACACGCGGCCACAA 62.539 61.111 12.47 0.00 0.00 3.33
2476 2507 3.269347 AACACAGACACACGCGGC 61.269 61.111 12.47 0.00 0.00 6.53
2477 2508 2.625906 CAACACAGACACACGCGG 59.374 61.111 12.47 1.27 0.00 6.46
2478 2509 2.053116 GCAACACAGACACACGCG 60.053 61.111 3.53 3.53 0.00 6.01
2479 2510 2.327940 GGCAACACAGACACACGC 59.672 61.111 0.00 0.00 0.00 5.34
2480 2511 2.089433 GACGGCAACACAGACACACG 62.089 60.000 0.00 0.00 0.00 4.49
2481 2512 1.641677 GACGGCAACACAGACACAC 59.358 57.895 0.00 0.00 0.00 3.82
2482 2513 1.522806 GGACGGCAACACAGACACA 60.523 57.895 0.00 0.00 0.00 3.72
2483 2514 2.594962 CGGACGGCAACACAGACAC 61.595 63.158 0.00 0.00 0.00 3.67
2484 2515 2.279851 CGGACGGCAACACAGACA 60.280 61.111 0.00 0.00 0.00 3.41
2485 2516 2.028484 TCGGACGGCAACACAGAC 59.972 61.111 0.00 0.00 0.00 3.51
2486 2517 2.028484 GTCGGACGGCAACACAGA 59.972 61.111 0.00 0.00 0.00 3.41
2487 2518 1.227999 AATGTCGGACGGCAACACAG 61.228 55.000 2.20 0.00 31.67 3.66
2488 2519 0.816018 AAATGTCGGACGGCAACACA 60.816 50.000 2.20 0.00 31.67 3.72
2489 2520 0.110373 GAAATGTCGGACGGCAACAC 60.110 55.000 2.20 0.00 31.67 3.32
2490 2521 0.250124 AGAAATGTCGGACGGCAACA 60.250 50.000 2.20 0.00 31.67 3.33
2491 2522 0.872388 AAGAAATGTCGGACGGCAAC 59.128 50.000 2.20 0.00 31.67 4.17
2492 2523 1.265635 CAAAGAAATGTCGGACGGCAA 59.734 47.619 2.20 0.00 31.67 4.52
2493 2524 0.871722 CAAAGAAATGTCGGACGGCA 59.128 50.000 0.08 0.08 0.00 5.69
2494 2525 0.454452 GCAAAGAAATGTCGGACGGC 60.454 55.000 3.34 0.00 0.00 5.68
2495 2526 1.156736 AGCAAAGAAATGTCGGACGG 58.843 50.000 3.34 0.00 0.00 4.79
2496 2527 2.480419 AGAAGCAAAGAAATGTCGGACG 59.520 45.455 3.34 0.00 0.00 4.79
2497 2528 4.024048 TGAAGAAGCAAAGAAATGTCGGAC 60.024 41.667 0.00 0.00 0.00 4.79
2498 2529 4.133820 TGAAGAAGCAAAGAAATGTCGGA 58.866 39.130 0.00 0.00 0.00 4.55
2499 2530 4.023707 ACTGAAGAAGCAAAGAAATGTCGG 60.024 41.667 0.00 0.00 0.00 4.79
2500 2531 5.100751 ACTGAAGAAGCAAAGAAATGTCG 57.899 39.130 0.00 0.00 0.00 4.35
2501 2532 7.417612 TGTAACTGAAGAAGCAAAGAAATGTC 58.582 34.615 0.00 0.00 0.00 3.06
2502 2533 7.333528 TGTAACTGAAGAAGCAAAGAAATGT 57.666 32.000 0.00 0.00 0.00 2.71
2503 2534 9.334693 GTATGTAACTGAAGAAGCAAAGAAATG 57.665 33.333 0.00 0.00 0.00 2.32
2504 2535 9.066892 TGTATGTAACTGAAGAAGCAAAGAAAT 57.933 29.630 0.00 0.00 0.00 2.17
2505 2536 8.445275 TGTATGTAACTGAAGAAGCAAAGAAA 57.555 30.769 0.00 0.00 0.00 2.52
2506 2537 8.506437 CATGTATGTAACTGAAGAAGCAAAGAA 58.494 33.333 0.00 0.00 0.00 2.52
2507 2538 7.661437 ACATGTATGTAACTGAAGAAGCAAAGA 59.339 33.333 0.00 0.00 39.68 2.52
2508 2539 7.747799 CACATGTATGTAACTGAAGAAGCAAAG 59.252 37.037 0.00 0.00 39.39 2.77
2509 2540 7.584108 CACATGTATGTAACTGAAGAAGCAAA 58.416 34.615 0.00 0.00 39.39 3.68
2510 2541 6.348458 GCACATGTATGTAACTGAAGAAGCAA 60.348 38.462 0.00 0.00 39.39 3.91
2511 2542 5.122239 GCACATGTATGTAACTGAAGAAGCA 59.878 40.000 0.00 0.00 39.39 3.91
2512 2543 5.563842 GCACATGTATGTAACTGAAGAAGC 58.436 41.667 0.00 0.00 39.39 3.86
2513 2544 5.576774 TCGCACATGTATGTAACTGAAGAAG 59.423 40.000 0.00 0.00 39.39 2.85
2514 2545 5.474825 TCGCACATGTATGTAACTGAAGAA 58.525 37.500 0.00 0.00 39.39 2.52
2515 2546 5.066968 TCGCACATGTATGTAACTGAAGA 57.933 39.130 0.00 0.00 39.39 2.87
2516 2547 5.778161 TTCGCACATGTATGTAACTGAAG 57.222 39.130 0.00 0.00 39.39 3.02
2517 2548 8.432110 AATATTCGCACATGTATGTAACTGAA 57.568 30.769 0.00 1.19 39.39 3.02
2518 2549 7.926018 AGAATATTCGCACATGTATGTAACTGA 59.074 33.333 9.78 0.00 39.39 3.41
2519 2550 8.006027 CAGAATATTCGCACATGTATGTAACTG 58.994 37.037 9.78 0.00 39.39 3.16
2520 2551 7.710907 ACAGAATATTCGCACATGTATGTAACT 59.289 33.333 9.78 0.00 39.39 2.24
2521 2552 7.851508 ACAGAATATTCGCACATGTATGTAAC 58.148 34.615 9.78 0.00 39.39 2.50
2522 2553 9.191995 CTACAGAATATTCGCACATGTATGTAA 57.808 33.333 9.78 0.00 39.39 2.41
2523 2554 7.328493 GCTACAGAATATTCGCACATGTATGTA 59.672 37.037 9.78 8.51 39.39 2.29
2524 2555 6.146184 GCTACAGAATATTCGCACATGTATGT 59.854 38.462 9.78 7.86 42.84 2.29
2525 2556 6.401474 GGCTACAGAATATTCGCACATGTATG 60.401 42.308 9.78 2.43 0.00 2.39
2526 2557 5.639506 GGCTACAGAATATTCGCACATGTAT 59.360 40.000 9.78 0.00 0.00 2.29
2527 2558 4.988540 GGCTACAGAATATTCGCACATGTA 59.011 41.667 9.78 10.95 0.00 2.29
2528 2559 3.809832 GGCTACAGAATATTCGCACATGT 59.190 43.478 9.78 10.43 0.00 3.21
2529 2560 4.060900 AGGCTACAGAATATTCGCACATG 58.939 43.478 9.78 5.12 0.00 3.21
2530 2561 4.060900 CAGGCTACAGAATATTCGCACAT 58.939 43.478 9.78 0.00 0.00 3.21
2531 2562 3.118775 ACAGGCTACAGAATATTCGCACA 60.119 43.478 9.78 0.00 0.00 4.57
2532 2563 3.458189 ACAGGCTACAGAATATTCGCAC 58.542 45.455 9.78 2.65 0.00 5.34
2533 2564 3.819564 ACAGGCTACAGAATATTCGCA 57.180 42.857 9.78 0.00 0.00 5.10
2534 2565 3.495001 GGAACAGGCTACAGAATATTCGC 59.505 47.826 9.78 7.10 0.00 4.70
2535 2566 4.693283 TGGAACAGGCTACAGAATATTCG 58.307 43.478 9.78 7.61 0.00 3.34
2551 2582 8.486210 ACAATCTATATGAACTTAGCTGGAACA 58.514 33.333 0.00 0.00 0.00 3.18
2552 2583 8.768955 CACAATCTATATGAACTTAGCTGGAAC 58.231 37.037 0.00 0.00 0.00 3.62
2553 2584 7.933577 CCACAATCTATATGAACTTAGCTGGAA 59.066 37.037 0.00 0.00 0.00 3.53
2554 2585 7.445121 CCACAATCTATATGAACTTAGCTGGA 58.555 38.462 0.00 0.00 0.00 3.86
2555 2586 6.148480 GCCACAATCTATATGAACTTAGCTGG 59.852 42.308 0.00 0.00 0.00 4.85
2556 2587 6.707608 TGCCACAATCTATATGAACTTAGCTG 59.292 38.462 0.00 0.00 0.00 4.24
2557 2588 6.830912 TGCCACAATCTATATGAACTTAGCT 58.169 36.000 0.00 0.00 0.00 3.32
2558 2589 7.442364 TCTTGCCACAATCTATATGAACTTAGC 59.558 37.037 0.00 0.00 0.00 3.09
2559 2590 8.768955 GTCTTGCCACAATCTATATGAACTTAG 58.231 37.037 0.00 0.00 0.00 2.18
2560 2591 8.264347 TGTCTTGCCACAATCTATATGAACTTA 58.736 33.333 0.00 0.00 0.00 2.24
2561 2592 7.112122 TGTCTTGCCACAATCTATATGAACTT 58.888 34.615 0.00 0.00 0.00 2.66
2562 2593 6.653020 TGTCTTGCCACAATCTATATGAACT 58.347 36.000 0.00 0.00 0.00 3.01
2563 2594 6.512415 GCTGTCTTGCCACAATCTATATGAAC 60.512 42.308 0.00 0.00 0.00 3.18
2564 2595 5.528690 GCTGTCTTGCCACAATCTATATGAA 59.471 40.000 0.00 0.00 0.00 2.57
2565 2596 5.059161 GCTGTCTTGCCACAATCTATATGA 58.941 41.667 0.00 0.00 0.00 2.15
2566 2597 4.818005 TGCTGTCTTGCCACAATCTATATG 59.182 41.667 0.00 0.00 0.00 1.78
2567 2598 5.039920 TGCTGTCTTGCCACAATCTATAT 57.960 39.130 0.00 0.00 0.00 0.86
2568 2599 4.486125 TGCTGTCTTGCCACAATCTATA 57.514 40.909 0.00 0.00 0.00 1.31
2569 2600 3.354948 TGCTGTCTTGCCACAATCTAT 57.645 42.857 0.00 0.00 0.00 1.98
2570 2601 2.857186 TGCTGTCTTGCCACAATCTA 57.143 45.000 0.00 0.00 0.00 1.98
2571 2602 1.985473 TTGCTGTCTTGCCACAATCT 58.015 45.000 0.00 0.00 0.00 2.40
2572 2603 2.798976 TTTGCTGTCTTGCCACAATC 57.201 45.000 0.00 0.00 0.00 2.67
2573 2604 3.756933 ATTTTGCTGTCTTGCCACAAT 57.243 38.095 0.00 0.00 0.00 2.71
2574 2605 3.888323 TCTATTTTGCTGTCTTGCCACAA 59.112 39.130 0.00 0.00 0.00 3.33
2575 2606 3.485394 TCTATTTTGCTGTCTTGCCACA 58.515 40.909 0.00 0.00 0.00 4.17
2576 2607 4.503741 TTCTATTTTGCTGTCTTGCCAC 57.496 40.909 0.00 0.00 0.00 5.01
2577 2608 4.523943 ACATTCTATTTTGCTGTCTTGCCA 59.476 37.500 0.00 0.00 0.00 4.92
2578 2609 5.064441 ACATTCTATTTTGCTGTCTTGCC 57.936 39.130 0.00 0.00 0.00 4.52
2579 2610 5.574443 GGAACATTCTATTTTGCTGTCTTGC 59.426 40.000 0.00 0.00 0.00 4.01
2580 2611 6.680810 TGGAACATTCTATTTTGCTGTCTTG 58.319 36.000 0.00 0.00 0.00 3.02
2581 2612 6.899393 TGGAACATTCTATTTTGCTGTCTT 57.101 33.333 0.00 0.00 0.00 3.01
2582 2613 6.899393 TTGGAACATTCTATTTTGCTGTCT 57.101 33.333 0.00 0.00 39.30 3.41
2583 2614 7.945033 TTTTGGAACATTCTATTTTGCTGTC 57.055 32.000 0.00 0.00 39.30 3.51
2584 2615 8.907222 AATTTTGGAACATTCTATTTTGCTGT 57.093 26.923 0.00 0.00 39.30 4.40
2585 2616 9.601971 CAAATTTTGGAACATTCTATTTTGCTG 57.398 29.630 0.97 0.00 39.30 4.41
2622 2653 0.040336 CCGATCTGCATGCAATCAGC 60.040 55.000 27.30 16.59 45.96 4.26
2623 2654 1.531578 CTCCGATCTGCATGCAATCAG 59.468 52.381 27.30 21.32 0.00 2.90
2624 2655 1.139455 TCTCCGATCTGCATGCAATCA 59.861 47.619 27.30 15.97 0.00 2.57
2625 2656 1.875009 TCTCCGATCTGCATGCAATC 58.125 50.000 22.88 22.62 0.00 2.67
2626 2657 2.219458 CTTCTCCGATCTGCATGCAAT 58.781 47.619 22.88 17.15 0.00 3.56
2627 2658 1.065926 ACTTCTCCGATCTGCATGCAA 60.066 47.619 22.88 13.05 0.00 4.08
2628 2659 0.538584 ACTTCTCCGATCTGCATGCA 59.461 50.000 21.29 21.29 0.00 3.96
2629 2660 0.935898 CACTTCTCCGATCTGCATGC 59.064 55.000 11.82 11.82 0.00 4.06
2630 2661 1.579698 CCACTTCTCCGATCTGCATG 58.420 55.000 0.00 0.00 0.00 4.06
2631 2662 0.467384 CCCACTTCTCCGATCTGCAT 59.533 55.000 0.00 0.00 0.00 3.96
2632 2663 0.904865 ACCCACTTCTCCGATCTGCA 60.905 55.000 0.00 0.00 0.00 4.41
2633 2664 0.250513 AACCCACTTCTCCGATCTGC 59.749 55.000 0.00 0.00 0.00 4.26
2634 2665 2.009042 GCAACCCACTTCTCCGATCTG 61.009 57.143 0.00 0.00 0.00 2.90
2635 2666 0.250513 GCAACCCACTTCTCCGATCT 59.749 55.000 0.00 0.00 0.00 2.75
2636 2667 0.036388 TGCAACCCACTTCTCCGATC 60.036 55.000 0.00 0.00 0.00 3.69
2637 2668 0.620556 ATGCAACCCACTTCTCCGAT 59.379 50.000 0.00 0.00 0.00 4.18
2638 2669 0.321564 CATGCAACCCACTTCTCCGA 60.322 55.000 0.00 0.00 0.00 4.55
2639 2670 0.321564 TCATGCAACCCACTTCTCCG 60.322 55.000 0.00 0.00 0.00 4.63
2640 2671 1.747355 CATCATGCAACCCACTTCTCC 59.253 52.381 0.00 0.00 0.00 3.71
2641 2672 1.747355 CCATCATGCAACCCACTTCTC 59.253 52.381 0.00 0.00 0.00 2.87
2642 2673 1.617804 CCCATCATGCAACCCACTTCT 60.618 52.381 0.00 0.00 0.00 2.85
2643 2674 0.819582 CCCATCATGCAACCCACTTC 59.180 55.000 0.00 0.00 0.00 3.01
2644 2675 1.259840 GCCCATCATGCAACCCACTT 61.260 55.000 0.00 0.00 0.00 3.16
2645 2676 1.683365 GCCCATCATGCAACCCACT 60.683 57.895 0.00 0.00 0.00 4.00
2646 2677 1.683365 AGCCCATCATGCAACCCAC 60.683 57.895 0.00 0.00 0.00 4.61
2647 2678 1.683025 CAGCCCATCATGCAACCCA 60.683 57.895 0.00 0.00 0.00 4.51
2648 2679 1.683365 ACAGCCCATCATGCAACCC 60.683 57.895 0.00 0.00 0.00 4.11
2649 2680 1.252904 ACACAGCCCATCATGCAACC 61.253 55.000 0.00 0.00 0.00 3.77
2650 2681 1.133025 GTACACAGCCCATCATGCAAC 59.867 52.381 0.00 0.00 0.00 4.17
2651 2682 1.271817 TGTACACAGCCCATCATGCAA 60.272 47.619 0.00 0.00 0.00 4.08
2652 2683 0.327591 TGTACACAGCCCATCATGCA 59.672 50.000 0.00 0.00 0.00 3.96
2653 2684 1.019673 CTGTACACAGCCCATCATGC 58.980 55.000 0.00 0.00 37.15 4.06
2654 2685 1.065199 ACCTGTACACAGCCCATCATG 60.065 52.381 3.75 0.00 42.47 3.07
2655 2686 1.210478 GACCTGTACACAGCCCATCAT 59.790 52.381 3.75 0.00 42.47 2.45
2656 2687 0.613260 GACCTGTACACAGCCCATCA 59.387 55.000 3.75 0.00 42.47 3.07
2657 2688 0.905357 AGACCTGTACACAGCCCATC 59.095 55.000 3.75 0.00 42.47 3.51
2658 2689 2.247699 TAGACCTGTACACAGCCCAT 57.752 50.000 3.75 0.00 42.47 4.00
2659 2690 2.018355 TTAGACCTGTACACAGCCCA 57.982 50.000 3.75 0.00 42.47 5.36
2660 2691 3.629142 ATTTAGACCTGTACACAGCCC 57.371 47.619 3.75 0.00 42.47 5.19
2661 2692 4.161754 ACCTATTTAGACCTGTACACAGCC 59.838 45.833 3.75 0.00 42.47 4.85
2662 2693 5.340439 ACCTATTTAGACCTGTACACAGC 57.660 43.478 3.75 0.00 42.47 4.40
2663 2694 6.321690 AGCTACCTATTTAGACCTGTACACAG 59.678 42.308 2.23 2.23 43.40 3.66
2664 2695 6.096423 CAGCTACCTATTTAGACCTGTACACA 59.904 42.308 0.00 0.00 0.00 3.72
2665 2696 6.096564 ACAGCTACCTATTTAGACCTGTACAC 59.903 42.308 0.00 0.00 0.00 2.90
2666 2697 6.192773 ACAGCTACCTATTTAGACCTGTACA 58.807 40.000 0.00 0.00 0.00 2.90
2667 2698 6.513066 CGACAGCTACCTATTTAGACCTGTAC 60.513 46.154 0.00 0.00 0.00 2.90
2668 2699 5.530171 CGACAGCTACCTATTTAGACCTGTA 59.470 44.000 0.00 0.00 0.00 2.74
2669 2700 4.338682 CGACAGCTACCTATTTAGACCTGT 59.661 45.833 0.00 0.00 0.00 4.00
2670 2701 4.261656 CCGACAGCTACCTATTTAGACCTG 60.262 50.000 0.00 0.00 0.00 4.00
2671 2702 3.890147 CCGACAGCTACCTATTTAGACCT 59.110 47.826 0.00 0.00 0.00 3.85
2672 2703 3.887716 TCCGACAGCTACCTATTTAGACC 59.112 47.826 0.00 0.00 0.00 3.85
2673 2704 5.708877 ATCCGACAGCTACCTATTTAGAC 57.291 43.478 0.00 0.00 0.00 2.59
2674 2705 6.726490 AAATCCGACAGCTACCTATTTAGA 57.274 37.500 0.00 0.00 0.00 2.10
2675 2706 6.761714 ACAAAATCCGACAGCTACCTATTTAG 59.238 38.462 0.00 0.00 0.00 1.85
2676 2707 6.646267 ACAAAATCCGACAGCTACCTATTTA 58.354 36.000 0.00 0.00 0.00 1.40
2677 2708 5.497474 ACAAAATCCGACAGCTACCTATTT 58.503 37.500 0.00 0.00 0.00 1.40
2678 2709 5.099042 ACAAAATCCGACAGCTACCTATT 57.901 39.130 0.00 0.00 0.00 1.73
2679 2710 4.694339 GACAAAATCCGACAGCTACCTAT 58.306 43.478 0.00 0.00 0.00 2.57
2680 2711 3.428452 CGACAAAATCCGACAGCTACCTA 60.428 47.826 0.00 0.00 0.00 3.08
2681 2712 2.674177 CGACAAAATCCGACAGCTACCT 60.674 50.000 0.00 0.00 0.00 3.08
2682 2713 1.659098 CGACAAAATCCGACAGCTACC 59.341 52.381 0.00 0.00 0.00 3.18
2683 2714 1.659098 CCGACAAAATCCGACAGCTAC 59.341 52.381 0.00 0.00 0.00 3.58
2684 2715 1.546923 TCCGACAAAATCCGACAGCTA 59.453 47.619 0.00 0.00 0.00 3.32
2685 2716 0.320374 TCCGACAAAATCCGACAGCT 59.680 50.000 0.00 0.00 0.00 4.24
2686 2717 1.062587 CATCCGACAAAATCCGACAGC 59.937 52.381 0.00 0.00 0.00 4.40
2687 2718 2.346803 ACATCCGACAAAATCCGACAG 58.653 47.619 0.00 0.00 0.00 3.51
2688 2719 2.465860 ACATCCGACAAAATCCGACA 57.534 45.000 0.00 0.00 0.00 4.35
2689 2720 2.284417 GCTACATCCGACAAAATCCGAC 59.716 50.000 0.00 0.00 0.00 4.79
2690 2721 2.546778 GCTACATCCGACAAAATCCGA 58.453 47.619 0.00 0.00 0.00 4.55
2691 2722 1.257936 CGCTACATCCGACAAAATCCG 59.742 52.381 0.00 0.00 0.00 4.18
2692 2723 2.546778 TCGCTACATCCGACAAAATCC 58.453 47.619 0.00 0.00 0.00 3.01
2693 2724 3.617263 ACTTCGCTACATCCGACAAAATC 59.383 43.478 0.00 0.00 34.01 2.17
2694 2725 3.596214 ACTTCGCTACATCCGACAAAAT 58.404 40.909 0.00 0.00 34.01 1.82
2695 2726 3.034721 ACTTCGCTACATCCGACAAAA 57.965 42.857 0.00 0.00 34.01 2.44
2696 2727 2.736144 ACTTCGCTACATCCGACAAA 57.264 45.000 0.00 0.00 34.01 2.83
2697 2728 2.736144 AACTTCGCTACATCCGACAA 57.264 45.000 0.00 0.00 34.01 3.18
2698 2729 3.853831 TTAACTTCGCTACATCCGACA 57.146 42.857 0.00 0.00 34.01 4.35
2699 2730 4.802039 TGATTTAACTTCGCTACATCCGAC 59.198 41.667 0.00 0.00 34.01 4.79
2700 2731 5.001237 TGATTTAACTTCGCTACATCCGA 57.999 39.130 0.00 0.00 0.00 4.55
2701 2732 5.041287 TCTGATTTAACTTCGCTACATCCG 58.959 41.667 0.00 0.00 0.00 4.18
2702 2733 7.484035 AATCTGATTTAACTTCGCTACATCC 57.516 36.000 0.00 0.00 0.00 3.51
2703 2734 8.391106 ACAAATCTGATTTAACTTCGCTACATC 58.609 33.333 14.78 0.00 0.00 3.06
2704 2735 8.268850 ACAAATCTGATTTAACTTCGCTACAT 57.731 30.769 14.78 0.00 0.00 2.29
2705 2736 7.602644 AGACAAATCTGATTTAACTTCGCTACA 59.397 33.333 14.78 0.00 32.29 2.74
2706 2737 7.965045 AGACAAATCTGATTTAACTTCGCTAC 58.035 34.615 14.78 0.00 32.29 3.58
2707 2738 8.547967 AAGACAAATCTGATTTAACTTCGCTA 57.452 30.769 14.78 0.00 34.48 4.26
2708 2739 7.361286 GGAAGACAAATCTGATTTAACTTCGCT 60.361 37.037 29.09 15.39 40.39 4.93
2709 2740 6.743172 GGAAGACAAATCTGATTTAACTTCGC 59.257 38.462 29.09 23.80 40.39 4.70
2710 2741 8.034058 AGGAAGACAAATCTGATTTAACTTCG 57.966 34.615 29.09 17.25 40.39 3.79
2713 2744 9.883142 CTCTAGGAAGACAAATCTGATTTAACT 57.117 33.333 14.78 13.32 34.48 2.24
2714 2745 9.660180 ACTCTAGGAAGACAAATCTGATTTAAC 57.340 33.333 14.78 11.56 34.48 2.01
2716 2747 9.658799 CAACTCTAGGAAGACAAATCTGATTTA 57.341 33.333 14.78 0.00 34.48 1.40
2717 2748 7.609532 CCAACTCTAGGAAGACAAATCTGATTT 59.390 37.037 9.76 9.76 34.48 2.17
2718 2749 7.108847 CCAACTCTAGGAAGACAAATCTGATT 58.891 38.462 0.00 0.00 34.48 2.57
2719 2750 6.214412 ACCAACTCTAGGAAGACAAATCTGAT 59.786 38.462 0.00 0.00 34.48 2.90
2720 2751 5.544176 ACCAACTCTAGGAAGACAAATCTGA 59.456 40.000 0.00 0.00 34.48 3.27
2721 2752 5.799213 ACCAACTCTAGGAAGACAAATCTG 58.201 41.667 0.00 0.00 34.48 2.90
2722 2753 5.336849 CGACCAACTCTAGGAAGACAAATCT 60.337 44.000 0.00 0.00 36.42 2.40
2723 2754 4.865365 CGACCAACTCTAGGAAGACAAATC 59.135 45.833 0.00 0.00 0.00 2.17
2724 2755 4.322801 CCGACCAACTCTAGGAAGACAAAT 60.323 45.833 0.00 0.00 0.00 2.32
2725 2756 3.006537 CCGACCAACTCTAGGAAGACAAA 59.993 47.826 0.00 0.00 0.00 2.83
2726 2757 2.561419 CCGACCAACTCTAGGAAGACAA 59.439 50.000 0.00 0.00 0.00 3.18
2727 2758 2.168496 CCGACCAACTCTAGGAAGACA 58.832 52.381 0.00 0.00 0.00 3.41
2728 2759 1.477295 CCCGACCAACTCTAGGAAGAC 59.523 57.143 0.00 0.00 0.00 3.01
2729 2760 1.076677 ACCCGACCAACTCTAGGAAGA 59.923 52.381 0.00 0.00 0.00 2.87
2730 2761 1.204941 CACCCGACCAACTCTAGGAAG 59.795 57.143 0.00 0.00 0.00 3.46
2731 2762 1.203087 TCACCCGACCAACTCTAGGAA 60.203 52.381 0.00 0.00 0.00 3.36
2732 2763 0.406750 TCACCCGACCAACTCTAGGA 59.593 55.000 0.00 0.00 0.00 2.94
2733 2764 0.818296 CTCACCCGACCAACTCTAGG 59.182 60.000 0.00 0.00 0.00 3.02
2734 2765 1.835494 TCTCACCCGACCAACTCTAG 58.165 55.000 0.00 0.00 0.00 2.43
2735 2766 2.025226 AGATCTCACCCGACCAACTCTA 60.025 50.000 0.00 0.00 0.00 2.43
2736 2767 1.187087 GATCTCACCCGACCAACTCT 58.813 55.000 0.00 0.00 0.00 3.24
2737 2768 1.134965 CAGATCTCACCCGACCAACTC 60.135 57.143 0.00 0.00 0.00 3.01
2738 2769 0.898320 CAGATCTCACCCGACCAACT 59.102 55.000 0.00 0.00 0.00 3.16
2739 2770 0.741221 GCAGATCTCACCCGACCAAC 60.741 60.000 0.00 0.00 0.00 3.77
2740 2771 1.596934 GCAGATCTCACCCGACCAA 59.403 57.895 0.00 0.00 0.00 3.67
2741 2772 2.710902 CGCAGATCTCACCCGACCA 61.711 63.158 0.00 0.00 0.00 4.02
2742 2773 2.105128 CGCAGATCTCACCCGACC 59.895 66.667 0.00 0.00 0.00 4.79
2743 2774 1.517257 CACGCAGATCTCACCCGAC 60.517 63.158 0.00 0.00 0.00 4.79
2744 2775 1.934220 GACACGCAGATCTCACCCGA 61.934 60.000 0.00 0.00 0.00 5.14
2745 2776 1.517257 GACACGCAGATCTCACCCG 60.517 63.158 0.00 0.00 0.00 5.28
2746 2777 1.517257 CGACACGCAGATCTCACCC 60.517 63.158 0.00 0.00 0.00 4.61
2747 2778 1.517257 CCGACACGCAGATCTCACC 60.517 63.158 0.00 0.00 0.00 4.02
2748 2779 0.388649 AACCGACACGCAGATCTCAC 60.389 55.000 0.00 0.00 0.00 3.51
2749 2780 0.388520 CAACCGACACGCAGATCTCA 60.389 55.000 0.00 0.00 0.00 3.27
2750 2781 1.078759 CCAACCGACACGCAGATCTC 61.079 60.000 0.00 0.00 0.00 2.75
2751 2782 1.079819 CCAACCGACACGCAGATCT 60.080 57.895 0.00 0.00 0.00 2.75
2752 2783 2.100631 CCCAACCGACACGCAGATC 61.101 63.158 0.00 0.00 0.00 2.75
2753 2784 2.047274 CCCAACCGACACGCAGAT 60.047 61.111 0.00 0.00 0.00 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.