Multiple sequence alignment - TraesCS2A01G006400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G006400 chr2A 100.000 3532 0 0 1 3532 2875192 2878723 0.000000e+00 6523.0
1 TraesCS2A01G006400 chr2A 85.769 1581 218 5 966 2539 2405893 2407473 0.000000e+00 1666.0
2 TraesCS2A01G006400 chr2B 94.864 1694 82 5 876 2565 9199192 9197500 0.000000e+00 2641.0
3 TraesCS2A01G006400 chr2B 87.744 1844 214 8 1070 2904 30990130 30988290 0.000000e+00 2143.0
4 TraesCS2A01G006400 chr2B 87.446 1864 216 9 1055 2904 31047885 31049744 0.000000e+00 2130.0
5 TraesCS2A01G006400 chr2B 80.612 1764 328 14 962 2715 9106488 9104729 0.000000e+00 1351.0
6 TraesCS2A01G006400 chr2B 88.417 259 18 5 61 307 9200007 9199749 5.730000e-78 302.0
7 TraesCS2A01G006400 chr2B 94.000 200 8 4 676 874 454823364 454823560 2.060000e-77 300.0
8 TraesCS2A01G006400 chr2B 91.500 200 14 3 676 875 496192096 496192292 4.490000e-69 272.0
9 TraesCS2A01G006400 chr2B 91.411 163 14 0 3337 3499 30987869 30987707 1.280000e-54 224.0
10 TraesCS2A01G006400 chr2B 92.857 154 11 0 3337 3490 31050165 31050318 1.280000e-54 224.0
11 TraesCS2A01G006400 chr2B 87.709 179 16 2 2603 2775 9197489 9197311 1.660000e-48 204.0
12 TraesCS2A01G006400 chr2B 88.166 169 9 6 393 554 9199729 9199565 1.290000e-44 191.0
13 TraesCS2A01G006400 chr2B 93.617 47 1 2 3153 3197 9197062 9197016 6.330000e-08 69.4
14 TraesCS2A01G006400 chrUn 85.919 1605 210 10 949 2539 15864866 15866468 0.000000e+00 1698.0
15 TraesCS2A01G006400 chrUn 87.671 219 16 4 457 675 15760767 15760560 9.790000e-61 244.0
16 TraesCS2A01G006400 chrUn 82.745 255 24 6 142 381 15761959 15761710 3.570000e-50 209.0
17 TraesCS2A01G006400 chrUn 78.481 158 22 6 673 828 273469822 273469675 3.750000e-15 93.5
18 TraesCS2A01G006400 chr2D 85.688 1614 220 6 937 2539 2512350 2510737 0.000000e+00 1690.0
19 TraesCS2A01G006400 chr2D 93.197 147 9 1 675 821 60080426 60080281 7.680000e-52 215.0
20 TraesCS2A01G006400 chr3D 81.567 1774 291 25 901 2655 1347467 1345711 0.000000e+00 1432.0
21 TraesCS2A01G006400 chr3B 81.511 1774 291 26 901 2655 3412267 3410512 0.000000e+00 1424.0
22 TraesCS2A01G006400 chr3B 93.970 199 10 2 676 874 242170062 242170258 2.060000e-77 300.0
23 TraesCS2A01G006400 chr3B 92.562 121 8 1 2892 3011 167772436 167772556 4.690000e-39 172.0
24 TraesCS2A01G006400 chr5D 94.975 199 6 3 676 874 514508495 514508689 3.420000e-80 309.0
25 TraesCS2A01G006400 chr5D 96.330 109 4 0 2904 3012 445111956 445112064 2.800000e-41 180.0
26 TraesCS2A01G006400 chr5A 88.235 204 20 4 673 874 680469142 680468941 1.270000e-59 241.0
27 TraesCS2A01G006400 chr5A 96.364 110 3 1 2904 3012 618869395 618869504 2.800000e-41 180.0
28 TraesCS2A01G006400 chr6A 95.890 146 5 1 676 821 86625519 86625375 5.890000e-58 235.0
29 TraesCS2A01G006400 chr6A 97.273 110 2 1 2904 3012 555314706 555314815 6.020000e-43 185.0
30 TraesCS2A01G006400 chr4D 94.776 134 4 2 743 876 37490722 37490592 4.620000e-49 206.0
31 TraesCS2A01G006400 chr4D 87.500 56 7 0 3347 3402 461797506 461797561 8.180000e-07 65.8
32 TraesCS2A01G006400 chr7D 96.364 110 3 1 2904 3012 462349265 462349156 2.800000e-41 180.0
33 TraesCS2A01G006400 chr7D 94.783 115 4 2 2899 3012 69052945 69053058 1.010000e-40 178.0
34 TraesCS2A01G006400 chr7D 80.645 124 20 4 673 794 72129535 72129656 3.750000e-15 93.5
35 TraesCS2A01G006400 chr7B 96.330 109 4 0 2904 3012 23926368 23926476 2.800000e-41 180.0
36 TraesCS2A01G006400 chr3A 96.330 109 4 0 2904 3012 536887955 536887847 2.800000e-41 180.0
37 TraesCS2A01G006400 chr1B 96.364 110 3 1 2904 3012 685092209 685092318 2.800000e-41 180.0
38 TraesCS2A01G006400 chr1B 85.965 57 8 0 3346 3402 461238870 461238814 1.060000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G006400 chr2A 2875192 2878723 3531 False 6523.00 6523 100.0000 1 3532 1 chr2A.!!$F2 3531
1 TraesCS2A01G006400 chr2A 2405893 2407473 1580 False 1666.00 1666 85.7690 966 2539 1 chr2A.!!$F1 1573
2 TraesCS2A01G006400 chr2B 9104729 9106488 1759 True 1351.00 1351 80.6120 962 2715 1 chr2B.!!$R1 1753
3 TraesCS2A01G006400 chr2B 30987707 30990130 2423 True 1183.50 2143 89.5775 1070 3499 2 chr2B.!!$R3 2429
4 TraesCS2A01G006400 chr2B 31047885 31050318 2433 False 1177.00 2130 90.1515 1055 3490 2 chr2B.!!$F3 2435
5 TraesCS2A01G006400 chr2B 9197016 9200007 2991 True 681.48 2641 90.5546 61 3197 5 chr2B.!!$R2 3136
6 TraesCS2A01G006400 chrUn 15864866 15866468 1602 False 1698.00 1698 85.9190 949 2539 1 chrUn.!!$F1 1590
7 TraesCS2A01G006400 chrUn 15760560 15761959 1399 True 226.50 244 85.2080 142 675 2 chrUn.!!$R2 533
8 TraesCS2A01G006400 chr2D 2510737 2512350 1613 True 1690.00 1690 85.6880 937 2539 1 chr2D.!!$R1 1602
9 TraesCS2A01G006400 chr3D 1345711 1347467 1756 True 1432.00 1432 81.5670 901 2655 1 chr3D.!!$R1 1754
10 TraesCS2A01G006400 chr3B 3410512 3412267 1755 True 1424.00 1424 81.5110 901 2655 1 chr3B.!!$R1 1754

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
34 35 0.036010 AGCTATGGTGCGCTCTTTGT 60.036 50.0 9.73 0.00 38.13 2.83 F
648 1672 0.038251 ACATGTGCACATCTCGTCGT 60.038 50.0 29.23 19.36 33.61 4.34 F
729 1753 0.038744 CAAGGGATGTTGAGGCAGGT 59.961 55.0 0.00 0.00 0.00 4.00 F
1940 2987 0.465460 GGGACACAGTTGGAGCAACA 60.465 55.0 0.00 0.00 45.66 3.33 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1428 2473 0.815734 CAAGCCTCCATCCTTGCAAG 59.184 55.0 19.93 19.93 32.94 4.01 R
2156 3205 0.372679 GCATGATATCATCAGCGGCG 59.627 55.0 15.49 0.51 43.53 6.46 R
2372 3421 0.582005 GCATAACCGCGATGTCCTTC 59.418 55.0 8.23 0.00 0.00 3.46 R
3345 4644 0.029035 GATGAGCAGAGCGCCATTTG 59.971 55.0 2.29 0.00 44.04 2.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.721286 CTCTTCCTTATGTAAAGCTATGGTG 57.279 40.000 0.00 0.00 0.00 4.17
25 26 6.055588 TCTTCCTTATGTAAAGCTATGGTGC 58.944 40.000 0.00 0.00 0.00 5.01
26 27 4.377021 TCCTTATGTAAAGCTATGGTGCG 58.623 43.478 0.00 0.00 38.13 5.34
27 28 3.058914 CCTTATGTAAAGCTATGGTGCGC 60.059 47.826 0.00 0.00 38.13 6.09
28 29 2.332063 ATGTAAAGCTATGGTGCGCT 57.668 45.000 9.73 0.00 38.30 5.92
29 30 1.651987 TGTAAAGCTATGGTGCGCTC 58.348 50.000 9.73 4.47 34.96 5.03
30 31 1.207089 TGTAAAGCTATGGTGCGCTCT 59.793 47.619 9.73 0.00 34.96 4.09
31 32 2.280628 GTAAAGCTATGGTGCGCTCTT 58.719 47.619 9.73 1.91 34.96 2.85
32 33 1.826385 AAAGCTATGGTGCGCTCTTT 58.174 45.000 9.73 4.10 34.96 2.52
33 34 1.089920 AAGCTATGGTGCGCTCTTTG 58.910 50.000 9.73 1.95 34.96 2.77
34 35 0.036010 AGCTATGGTGCGCTCTTTGT 60.036 50.000 9.73 0.00 38.13 2.83
35 36 0.097674 GCTATGGTGCGCTCTTTGTG 59.902 55.000 9.73 0.00 0.00 3.33
36 37 1.442769 CTATGGTGCGCTCTTTGTGT 58.557 50.000 9.73 0.00 0.00 3.72
37 38 2.616960 CTATGGTGCGCTCTTTGTGTA 58.383 47.619 9.73 0.00 0.00 2.90
38 39 1.156736 ATGGTGCGCTCTTTGTGTAC 58.843 50.000 9.73 0.00 40.31 2.90
39 40 0.105964 TGGTGCGCTCTTTGTGTACT 59.894 50.000 9.73 0.00 40.74 2.73
40 41 0.790814 GGTGCGCTCTTTGTGTACTC 59.209 55.000 9.73 0.00 40.74 2.59
41 42 1.605712 GGTGCGCTCTTTGTGTACTCT 60.606 52.381 9.73 0.00 40.74 3.24
42 43 1.721926 GTGCGCTCTTTGTGTACTCTC 59.278 52.381 9.73 0.00 38.47 3.20
43 44 1.339929 TGCGCTCTTTGTGTACTCTCA 59.660 47.619 9.73 0.00 0.00 3.27
44 45 2.223947 TGCGCTCTTTGTGTACTCTCAA 60.224 45.455 9.73 0.00 0.00 3.02
45 46 2.800544 GCGCTCTTTGTGTACTCTCAAA 59.199 45.455 0.00 3.28 36.23 2.69
46 47 3.247648 GCGCTCTTTGTGTACTCTCAAAA 59.752 43.478 0.00 0.00 36.86 2.44
47 48 4.260620 GCGCTCTTTGTGTACTCTCAAAAA 60.261 41.667 0.00 0.00 36.86 1.94
108 109 6.542821 TGTCCCACTTGTAGAGAAATGAAAT 58.457 36.000 0.00 0.00 0.00 2.17
115 116 9.390795 CACTTGTAGAGAAATGAAATCAAACTG 57.609 33.333 0.00 0.00 0.00 3.16
116 117 8.571336 ACTTGTAGAGAAATGAAATCAAACTGG 58.429 33.333 0.00 0.00 0.00 4.00
118 119 6.489700 TGTAGAGAAATGAAATCAAACTGGCA 59.510 34.615 0.00 0.00 0.00 4.92
126 127 5.472148 TGAAATCAAACTGGCATGTGAATC 58.528 37.500 0.00 0.00 0.00 2.52
128 129 2.777094 TCAAACTGGCATGTGAATCGA 58.223 42.857 0.00 0.00 0.00 3.59
160 161 7.601856 ACAACACATGTAAATGGTGATTTAGG 58.398 34.615 6.12 0.00 41.63 2.69
186 187 7.495606 GCATGCCAGCATATGTTACATATACTA 59.504 37.037 16.36 3.81 34.91 1.82
210 223 1.073923 GGGTGTGAACATGAAGGACCT 59.926 52.381 0.00 0.00 0.00 3.85
229 242 6.070710 AGGACCTCACACTTATTTAAGAGGTC 60.071 42.308 24.09 24.09 44.56 3.85
279 295 6.127026 GGTGTTGTGGAGGAGTCTATCTTATT 60.127 42.308 0.00 0.00 0.00 1.40
316 332 1.639298 GGATGCTTGCACACGTCTCC 61.639 60.000 0.00 0.00 0.00 3.71
317 333 1.639298 GATGCTTGCACACGTCTCCC 61.639 60.000 0.00 0.00 0.00 4.30
318 334 2.280797 GCTTGCACACGTCTCCCA 60.281 61.111 0.00 0.00 0.00 4.37
322 338 1.732259 CTTGCACACGTCTCCCATTAC 59.268 52.381 0.00 0.00 0.00 1.89
335 351 6.591834 CGTCTCCCATTACCAATATCAGAATC 59.408 42.308 0.00 0.00 0.00 2.52
336 352 7.453393 GTCTCCCATTACCAATATCAGAATCA 58.547 38.462 0.00 0.00 0.00 2.57
345 361 7.981102 ACCAATATCAGAATCATGTCATCAG 57.019 36.000 0.00 0.00 0.00 2.90
346 362 7.742767 ACCAATATCAGAATCATGTCATCAGA 58.257 34.615 0.00 0.00 0.00 3.27
347 363 8.383947 ACCAATATCAGAATCATGTCATCAGAT 58.616 33.333 0.00 1.14 0.00 2.90
348 364 8.884726 CCAATATCAGAATCATGTCATCAGATC 58.115 37.037 0.00 0.00 0.00 2.75
349 365 9.436957 CAATATCAGAATCATGTCATCAGATCA 57.563 33.333 0.00 0.00 0.00 2.92
350 366 9.660180 AATATCAGAATCATGTCATCAGATCAG 57.340 33.333 0.00 0.00 0.00 2.90
381 397 3.279434 GCCAAAACGATAGAGGACCAAT 58.721 45.455 0.00 0.00 41.38 3.16
382 398 3.065371 GCCAAAACGATAGAGGACCAATG 59.935 47.826 0.00 0.00 41.38 2.82
384 400 4.941263 CCAAAACGATAGAGGACCAATGAA 59.059 41.667 0.00 0.00 41.38 2.57
386 402 3.821421 ACGATAGAGGACCAATGAACC 57.179 47.619 0.00 0.00 41.38 3.62
387 403 3.375699 ACGATAGAGGACCAATGAACCT 58.624 45.455 0.00 0.00 41.38 3.50
388 404 3.775316 ACGATAGAGGACCAATGAACCTT 59.225 43.478 0.00 0.00 41.38 3.50
390 406 5.186198 CGATAGAGGACCAATGAACCTTTT 58.814 41.667 0.00 0.00 39.76 2.27
414 430 5.622770 TTTCTTCGATAAAACCAAGGAGC 57.377 39.130 0.00 0.00 0.00 4.70
416 432 5.670792 TCTTCGATAAAACCAAGGAGCTA 57.329 39.130 0.00 0.00 0.00 3.32
419 435 6.379133 TCTTCGATAAAACCAAGGAGCTAGTA 59.621 38.462 0.00 0.00 0.00 1.82
493 1254 1.364901 CCAACTGCCACCTGCTTTG 59.635 57.895 0.00 0.00 42.00 2.77
521 1282 1.710809 ACCATAGGCTTTGGACCAACT 59.289 47.619 27.67 3.65 37.69 3.16
533 1294 3.036091 TGGACCAACTAGGCACCTATAC 58.964 50.000 0.00 0.00 43.14 1.47
536 1297 4.503296 GGACCAACTAGGCACCTATACATG 60.503 50.000 0.00 0.00 43.14 3.21
560 1399 4.252878 GGCCAACCCAATTAATGAAGTTG 58.747 43.478 0.00 13.75 40.20 3.16
565 1404 7.216494 CCAACCCAATTAATGAAGTTGAGTTT 58.784 34.615 18.96 0.00 41.68 2.66
582 1421 8.612619 AGTTGAGTTTTGTTGACACTAACATAG 58.387 33.333 9.57 0.00 40.00 2.23
585 1424 7.228507 TGAGTTTTGTTGACACTAACATAGCAT 59.771 33.333 9.57 0.00 40.00 3.79
586 1425 8.615878 AGTTTTGTTGACACTAACATAGCATA 57.384 30.769 9.57 0.00 40.00 3.14
587 1426 8.721478 AGTTTTGTTGACACTAACATAGCATAG 58.279 33.333 9.57 0.00 40.00 2.23
620 1644 5.452077 GCTAGTAGTACAGAACCAATGGAGG 60.452 48.000 6.16 0.00 0.00 4.30
625 1649 5.316987 AGTACAGAACCAATGGAGGAAAAG 58.683 41.667 6.16 0.00 0.00 2.27
640 1664 3.828451 AGGAAAAGCTTACATGTGCACAT 59.172 39.130 26.61 26.61 36.96 3.21
641 1665 4.082571 AGGAAAAGCTTACATGTGCACATC 60.083 41.667 29.23 17.38 33.61 3.06
647 1671 1.908065 TACATGTGCACATCTCGTCG 58.092 50.000 29.23 18.71 33.61 5.12
648 1672 0.038251 ACATGTGCACATCTCGTCGT 60.038 50.000 29.23 19.36 33.61 4.34
657 1681 1.540267 ACATCTCGTCGTTGCTAGTGT 59.460 47.619 0.00 0.00 0.00 3.55
667 1691 6.908820 TCGTCGTTGCTAGTGTATTTATACAG 59.091 38.462 2.91 0.00 43.32 2.74
668 1692 6.690098 CGTCGTTGCTAGTGTATTTATACAGT 59.310 38.462 13.21 13.21 45.89 3.55
669 1693 7.852454 CGTCGTTGCTAGTGTATTTATACAGTA 59.148 37.037 13.87 13.87 43.20 2.74
670 1694 8.951969 GTCGTTGCTAGTGTATTTATACAGTAC 58.048 37.037 11.57 9.90 43.20 2.73
671 1695 8.131100 TCGTTGCTAGTGTATTTATACAGTACC 58.869 37.037 11.57 7.74 43.20 3.34
672 1696 7.916977 CGTTGCTAGTGTATTTATACAGTACCA 59.083 37.037 11.57 9.65 43.20 3.25
673 1697 9.590451 GTTGCTAGTGTATTTATACAGTACCAA 57.410 33.333 15.22 15.22 43.20 3.67
675 1699 9.976511 TGCTAGTGTATTTATACAGTACCAATC 57.023 33.333 11.57 0.00 43.20 2.67
676 1700 9.976511 GCTAGTGTATTTATACAGTACCAATCA 57.023 33.333 11.57 0.00 43.20 2.57
679 1703 9.817809 AGTGTATTTATACAGTACCAATCAGTG 57.182 33.333 8.16 0.00 43.20 3.66
681 1705 7.713507 TGTATTTATACAGTACCAATCAGTGGC 59.286 37.037 0.00 0.00 43.61 5.01
682 1706 7.095774 GTATTTATACAGTACCAATCAGTGGCG 60.096 40.741 0.00 0.00 40.92 5.69
722 1746 2.770130 GGGGGCAAGGGATGTTGA 59.230 61.111 0.00 0.00 0.00 3.18
723 1747 1.380380 GGGGGCAAGGGATGTTGAG 60.380 63.158 0.00 0.00 0.00 3.02
724 1748 1.380380 GGGGCAAGGGATGTTGAGG 60.380 63.158 0.00 0.00 0.00 3.86
725 1749 2.054453 GGGCAAGGGATGTTGAGGC 61.054 63.158 0.00 0.00 0.00 4.70
726 1750 1.304381 GGCAAGGGATGTTGAGGCA 60.304 57.895 0.00 0.00 0.00 4.75
727 1751 1.318158 GGCAAGGGATGTTGAGGCAG 61.318 60.000 0.00 0.00 0.00 4.85
728 1752 1.318158 GCAAGGGATGTTGAGGCAGG 61.318 60.000 0.00 0.00 0.00 4.85
729 1753 0.038744 CAAGGGATGTTGAGGCAGGT 59.961 55.000 0.00 0.00 0.00 4.00
730 1754 0.779997 AAGGGATGTTGAGGCAGGTT 59.220 50.000 0.00 0.00 0.00 3.50
731 1755 1.668826 AGGGATGTTGAGGCAGGTTA 58.331 50.000 0.00 0.00 0.00 2.85
732 1756 1.561542 AGGGATGTTGAGGCAGGTTAG 59.438 52.381 0.00 0.00 0.00 2.34
733 1757 1.559682 GGGATGTTGAGGCAGGTTAGA 59.440 52.381 0.00 0.00 0.00 2.10
734 1758 2.420687 GGGATGTTGAGGCAGGTTAGAG 60.421 54.545 0.00 0.00 0.00 2.43
735 1759 2.501723 GGATGTTGAGGCAGGTTAGAGA 59.498 50.000 0.00 0.00 0.00 3.10
736 1760 3.431486 GGATGTTGAGGCAGGTTAGAGAG 60.431 52.174 0.00 0.00 0.00 3.20
737 1761 2.889512 TGTTGAGGCAGGTTAGAGAGA 58.110 47.619 0.00 0.00 0.00 3.10
738 1762 2.828520 TGTTGAGGCAGGTTAGAGAGAG 59.171 50.000 0.00 0.00 0.00 3.20
739 1763 2.151502 TGAGGCAGGTTAGAGAGAGG 57.848 55.000 0.00 0.00 0.00 3.69
740 1764 0.750249 GAGGCAGGTTAGAGAGAGGC 59.250 60.000 0.00 0.00 0.00 4.70
741 1765 0.689412 AGGCAGGTTAGAGAGAGGCC 60.689 60.000 0.00 0.00 40.18 5.19
742 1766 0.978146 GGCAGGTTAGAGAGAGGCCA 60.978 60.000 5.01 0.00 39.66 5.36
743 1767 0.905357 GCAGGTTAGAGAGAGGCCAA 59.095 55.000 5.01 0.00 0.00 4.52
744 1768 1.279271 GCAGGTTAGAGAGAGGCCAAA 59.721 52.381 5.01 0.00 0.00 3.28
745 1769 2.092699 GCAGGTTAGAGAGAGGCCAAAT 60.093 50.000 5.01 0.00 0.00 2.32
746 1770 3.802866 CAGGTTAGAGAGAGGCCAAATC 58.197 50.000 5.01 0.00 0.00 2.17
747 1771 3.198635 CAGGTTAGAGAGAGGCCAAATCA 59.801 47.826 5.01 0.00 0.00 2.57
748 1772 4.043596 AGGTTAGAGAGAGGCCAAATCAT 58.956 43.478 5.01 0.00 0.00 2.45
749 1773 5.070981 CAGGTTAGAGAGAGGCCAAATCATA 59.929 44.000 5.01 0.00 0.00 2.15
750 1774 5.848921 AGGTTAGAGAGAGGCCAAATCATAT 59.151 40.000 5.01 0.00 0.00 1.78
751 1775 7.019388 AGGTTAGAGAGAGGCCAAATCATATA 58.981 38.462 5.01 0.00 0.00 0.86
752 1776 7.514127 AGGTTAGAGAGAGGCCAAATCATATAA 59.486 37.037 5.01 0.00 0.00 0.98
753 1777 8.157476 GGTTAGAGAGAGGCCAAATCATATAAA 58.843 37.037 5.01 0.00 0.00 1.40
754 1778 9.213799 GTTAGAGAGAGGCCAAATCATATAAAG 57.786 37.037 5.01 0.00 0.00 1.85
755 1779 7.623999 AGAGAGAGGCCAAATCATATAAAGA 57.376 36.000 5.01 0.00 0.00 2.52
756 1780 7.449247 AGAGAGAGGCCAAATCATATAAAGAC 58.551 38.462 5.01 0.00 0.00 3.01
757 1781 7.071698 AGAGAGAGGCCAAATCATATAAAGACA 59.928 37.037 5.01 0.00 0.00 3.41
758 1782 7.753630 AGAGAGGCCAAATCATATAAAGACAT 58.246 34.615 5.01 0.00 0.00 3.06
759 1783 7.664731 AGAGAGGCCAAATCATATAAAGACATG 59.335 37.037 5.01 0.00 0.00 3.21
760 1784 6.208204 AGAGGCCAAATCATATAAAGACATGC 59.792 38.462 5.01 0.00 0.00 4.06
761 1785 6.073314 AGGCCAAATCATATAAAGACATGCT 58.927 36.000 5.01 0.00 0.00 3.79
762 1786 6.552350 AGGCCAAATCATATAAAGACATGCTT 59.448 34.615 5.01 0.00 38.88 3.91
764 1788 7.712205 GGCCAAATCATATAAAGACATGCTTTT 59.288 33.333 16.63 9.51 44.24 2.27
765 1789 9.748708 GCCAAATCATATAAAGACATGCTTTTA 57.251 29.630 16.63 11.09 44.24 1.52
781 1805 5.707411 GCTTTTAGCAGCAAATAACCATG 57.293 39.130 0.00 0.00 41.89 3.66
782 1806 5.410067 GCTTTTAGCAGCAAATAACCATGA 58.590 37.500 0.00 0.00 41.89 3.07
783 1807 5.868801 GCTTTTAGCAGCAAATAACCATGAA 59.131 36.000 0.00 0.00 41.89 2.57
784 1808 6.536224 GCTTTTAGCAGCAAATAACCATGAAT 59.464 34.615 0.00 0.00 41.89 2.57
785 1809 7.064966 GCTTTTAGCAGCAAATAACCATGAATT 59.935 33.333 0.00 0.00 41.89 2.17
786 1810 8.477984 TTTTAGCAGCAAATAACCATGAATTC 57.522 30.769 0.00 0.00 0.00 2.17
787 1811 5.927281 AGCAGCAAATAACCATGAATTCT 57.073 34.783 7.05 0.00 0.00 2.40
788 1812 5.657474 AGCAGCAAATAACCATGAATTCTG 58.343 37.500 7.05 2.75 0.00 3.02
789 1813 4.269363 GCAGCAAATAACCATGAATTCTGC 59.731 41.667 7.05 4.81 36.81 4.26
790 1814 5.412640 CAGCAAATAACCATGAATTCTGCA 58.587 37.500 7.05 0.00 0.00 4.41
791 1815 5.290158 CAGCAAATAACCATGAATTCTGCAC 59.710 40.000 7.05 0.00 0.00 4.57
792 1816 5.186409 AGCAAATAACCATGAATTCTGCACT 59.814 36.000 7.05 0.00 0.00 4.40
793 1817 5.290158 GCAAATAACCATGAATTCTGCACTG 59.710 40.000 7.05 0.00 0.00 3.66
794 1818 6.392354 CAAATAACCATGAATTCTGCACTGT 58.608 36.000 7.05 0.00 0.00 3.55
795 1819 6.594788 AATAACCATGAATTCTGCACTGTT 57.405 33.333 7.05 4.71 0.00 3.16
796 1820 4.510038 AACCATGAATTCTGCACTGTTC 57.490 40.909 7.05 0.00 0.00 3.18
797 1821 3.489355 ACCATGAATTCTGCACTGTTCA 58.511 40.909 7.05 5.63 35.33 3.18
798 1822 4.084287 ACCATGAATTCTGCACTGTTCAT 58.916 39.130 7.05 8.95 40.78 2.57
799 1823 4.157289 ACCATGAATTCTGCACTGTTCATC 59.843 41.667 7.05 0.00 38.77 2.92
800 1824 4.157105 CCATGAATTCTGCACTGTTCATCA 59.843 41.667 7.05 0.00 38.77 3.07
826 1850 9.886132 AGTAAATTAACTACAAATCCTCGATGT 57.114 29.630 0.00 0.00 0.00 3.06
831 1855 9.751542 ATTAACTACAAATCCTCGATGTTAGAG 57.248 33.333 0.00 0.00 35.60 2.43
837 1861 1.749033 CTCGATGTTAGAGGGGGCC 59.251 63.158 0.00 0.00 32.38 5.80
838 1862 1.002403 TCGATGTTAGAGGGGGCCA 59.998 57.895 4.39 0.00 0.00 5.36
839 1863 1.048724 TCGATGTTAGAGGGGGCCAG 61.049 60.000 4.39 0.00 0.00 4.85
840 1864 1.839894 GATGTTAGAGGGGGCCAGG 59.160 63.158 4.39 0.00 0.00 4.45
841 1865 1.697754 ATGTTAGAGGGGGCCAGGG 60.698 63.158 4.39 0.00 0.00 4.45
842 1866 3.810188 GTTAGAGGGGGCCAGGGC 61.810 72.222 4.39 3.77 41.06 5.19
853 1877 4.748144 CCAGGGCCCTTGCTGGTC 62.748 72.222 26.10 0.00 37.74 4.02
873 1897 4.087892 CCCCTGTCTCCGCCACTG 62.088 72.222 0.00 0.00 0.00 3.66
874 1898 4.087892 CCCTGTCTCCGCCACTGG 62.088 72.222 0.00 0.00 33.65 4.00
885 1909 1.529226 CGCCACTGGTACCAATTGAA 58.471 50.000 17.11 0.00 0.00 2.69
888 1912 3.088532 GCCACTGGTACCAATTGAATGA 58.911 45.455 17.11 0.00 0.00 2.57
889 1913 3.119495 GCCACTGGTACCAATTGAATGAC 60.119 47.826 17.11 0.00 0.00 3.06
912 1938 3.515330 AGTATTACGGACGGAACTTGG 57.485 47.619 0.00 0.00 0.00 3.61
981 2019 7.940878 TCTAAGTAGTAGCATATCCCATACCT 58.059 38.462 0.00 0.00 0.00 3.08
992 2033 3.627395 TCCCATACCTGTGATCACAAC 57.373 47.619 27.63 2.25 41.33 3.32
1030 2071 1.273759 AGAGCTGCTCATCTCCACAA 58.726 50.000 29.49 0.00 32.06 3.33
1240 2285 1.299648 CTCCTGGAACCGGAATGCA 59.700 57.895 9.46 7.31 0.00 3.96
1714 2760 2.575735 TGATCAGGTGGCTAAACATGGA 59.424 45.455 0.00 0.00 32.81 3.41
1778 2825 4.268797 CTTCGTCATGGAGATGATGGAT 57.731 45.455 0.00 0.00 43.37 3.41
1826 2873 2.151202 GGCAATGACGAGGAACAAGAA 58.849 47.619 0.00 0.00 0.00 2.52
1937 2984 1.451504 CAGGGACACAGTTGGAGCA 59.548 57.895 0.00 0.00 0.00 4.26
1940 2987 0.465460 GGGACACAGTTGGAGCAACA 60.465 55.000 0.00 0.00 45.66 3.33
2267 3316 3.256631 GCATATGGGGTAAAGATTGCCTG 59.743 47.826 4.56 0.00 35.54 4.85
2289 3338 5.030147 TGAACTACAATCCAGATAGGTGGT 58.970 41.667 0.00 0.00 38.88 4.16
2544 3593 6.752351 GCGAGAAATGTAACATTAGACTCTCA 59.248 38.462 2.01 0.00 0.00 3.27
2574 3625 3.582714 AACGTACTTAGTGGCCACTAC 57.417 47.619 39.32 30.10 43.02 2.73
2577 3628 2.162208 CGTACTTAGTGGCCACTACGAA 59.838 50.000 40.85 29.72 43.02 3.85
2686 3740 3.458189 ACGTGCTAGCAATGATTACTCC 58.542 45.455 21.29 1.45 0.00 3.85
2692 3746 4.260375 GCTAGCAATGATTACTCCGTTGTG 60.260 45.833 10.63 0.00 0.00 3.33
2731 3790 7.530426 AAGGCATCATAATATTTTCCTCCAC 57.470 36.000 0.00 0.00 0.00 4.02
2732 3791 6.012745 AGGCATCATAATATTTTCCTCCACC 58.987 40.000 0.00 0.00 0.00 4.61
2733 3792 5.106157 GGCATCATAATATTTTCCTCCACCG 60.106 44.000 0.00 0.00 0.00 4.94
2737 3796 6.228258 TCATAATATTTTCCTCCACCGTAGC 58.772 40.000 0.00 0.00 0.00 3.58
2739 3798 2.403252 ATTTTCCTCCACCGTAGCAG 57.597 50.000 0.00 0.00 0.00 4.24
2745 3804 1.025812 CTCCACCGTAGCAGACTAGG 58.974 60.000 0.00 0.00 34.66 3.02
2749 3808 2.362736 CACCGTAGCAGACTAGGTACA 58.637 52.381 0.00 0.00 41.32 2.90
2904 4023 4.493545 GCGTGTATGTAATTAGCAAGCGTT 60.494 41.667 0.00 0.00 0.00 4.84
2905 4024 5.556470 CGTGTATGTAATTAGCAAGCGTTT 58.444 37.500 0.00 0.00 0.00 3.60
2906 4025 6.019152 CGTGTATGTAATTAGCAAGCGTTTT 58.981 36.000 0.00 0.00 0.00 2.43
2907 4026 6.521821 CGTGTATGTAATTAGCAAGCGTTTTT 59.478 34.615 0.00 0.00 0.00 1.94
2928 4047 4.586306 TTTAGAAAAGGAGGATGACCCC 57.414 45.455 0.00 0.00 36.73 4.95
2929 4048 0.912486 AGAAAAGGAGGATGACCCCG 59.088 55.000 0.00 0.00 36.73 5.73
2930 4049 0.107165 GAAAAGGAGGATGACCCCGG 60.107 60.000 0.00 0.00 36.73 5.73
2931 4050 2.211468 AAAAGGAGGATGACCCCGGC 62.211 60.000 0.00 0.00 36.73 6.13
2934 4053 3.551407 GAGGATGACCCCGGCCTC 61.551 72.222 7.66 7.66 40.04 4.70
2935 4054 4.095400 AGGATGACCCCGGCCTCT 62.095 66.667 0.00 0.00 36.73 3.69
2936 4055 3.866582 GGATGACCCCGGCCTCTG 61.867 72.222 0.00 0.00 0.00 3.35
2937 4056 4.554036 GATGACCCCGGCCTCTGC 62.554 72.222 0.00 0.00 0.00 4.26
2940 4059 4.115199 GACCCCGGCCTCTGCATT 62.115 66.667 0.00 0.00 40.13 3.56
2941 4060 3.645268 GACCCCGGCCTCTGCATTT 62.645 63.158 0.00 0.00 40.13 2.32
2942 4061 3.142838 CCCCGGCCTCTGCATTTG 61.143 66.667 0.00 0.00 40.13 2.32
2943 4062 3.142838 CCCGGCCTCTGCATTTGG 61.143 66.667 0.00 0.00 40.13 3.28
2944 4063 3.142838 CCGGCCTCTGCATTTGGG 61.143 66.667 0.00 0.00 40.13 4.12
2945 4064 3.830192 CGGCCTCTGCATTTGGGC 61.830 66.667 13.76 13.76 43.42 5.36
2946 4065 3.830192 GGCCTCTGCATTTGGGCG 61.830 66.667 9.78 0.00 44.91 6.13
2947 4066 2.751436 GCCTCTGCATTTGGGCGA 60.751 61.111 0.00 0.00 37.47 5.54
2948 4067 2.123428 GCCTCTGCATTTGGGCGAT 61.123 57.895 0.00 0.00 37.47 4.58
2949 4068 1.731700 CCTCTGCATTTGGGCGATG 59.268 57.895 0.00 0.00 36.28 3.84
2954 4073 3.184094 GCATTTGGGCGATGCATAC 57.816 52.632 0.00 0.00 46.96 2.39
2955 4074 0.385029 GCATTTGGGCGATGCATACA 59.615 50.000 0.00 0.00 46.96 2.29
2956 4075 1.601162 GCATTTGGGCGATGCATACAG 60.601 52.381 0.00 0.00 46.96 2.74
2957 4076 0.670162 ATTTGGGCGATGCATACAGC 59.330 50.000 0.00 5.92 45.96 4.40
2963 4082 2.497107 GCGATGCATACAGCCATTTT 57.503 45.000 0.00 0.00 44.83 1.82
2964 4083 3.624326 GCGATGCATACAGCCATTTTA 57.376 42.857 0.00 0.00 44.83 1.52
2965 4084 4.164822 GCGATGCATACAGCCATTTTAT 57.835 40.909 0.00 0.00 44.83 1.40
2966 4085 4.549458 GCGATGCATACAGCCATTTTATT 58.451 39.130 0.00 0.00 44.83 1.40
2967 4086 5.698832 GCGATGCATACAGCCATTTTATTA 58.301 37.500 0.00 0.00 44.83 0.98
2968 4087 6.148948 GCGATGCATACAGCCATTTTATTAA 58.851 36.000 0.00 0.00 44.83 1.40
2969 4088 6.808212 GCGATGCATACAGCCATTTTATTAAT 59.192 34.615 0.00 0.00 44.83 1.40
2970 4089 7.329226 GCGATGCATACAGCCATTTTATTAATT 59.671 33.333 0.00 0.00 44.83 1.40
2971 4090 9.838975 CGATGCATACAGCCATTTTATTAATTA 57.161 29.630 0.00 0.00 44.83 1.40
2993 4112 9.574516 AATTATTCTCACAAGACCTTACAAAGT 57.425 29.630 0.00 0.00 0.00 2.66
2998 4117 9.485206 TTCTCACAAGACCTTACAAAGTAATAC 57.515 33.333 0.00 0.00 0.00 1.89
2999 4118 8.644216 TCTCACAAGACCTTACAAAGTAATACA 58.356 33.333 0.00 0.00 0.00 2.29
3000 4119 9.268268 CTCACAAGACCTTACAAAGTAATACAA 57.732 33.333 0.00 0.00 0.00 2.41
3001 4120 9.787435 TCACAAGACCTTACAAAGTAATACAAT 57.213 29.630 0.00 0.00 0.00 2.71
3067 4192 2.548057 CGTGCTGCAAAGTTAAGAAGGA 59.452 45.455 2.77 0.00 0.00 3.36
3068 4193 3.364366 CGTGCTGCAAAGTTAAGAAGGAG 60.364 47.826 2.77 0.00 0.00 3.69
3069 4194 3.815401 GTGCTGCAAAGTTAAGAAGGAGA 59.185 43.478 2.77 0.00 0.00 3.71
3070 4195 4.457257 GTGCTGCAAAGTTAAGAAGGAGAT 59.543 41.667 2.77 0.00 0.00 2.75
3071 4196 4.456911 TGCTGCAAAGTTAAGAAGGAGATG 59.543 41.667 0.00 0.00 0.00 2.90
3072 4197 4.697352 GCTGCAAAGTTAAGAAGGAGATGA 59.303 41.667 0.00 0.00 0.00 2.92
3073 4198 5.356470 GCTGCAAAGTTAAGAAGGAGATGAT 59.644 40.000 0.00 0.00 0.00 2.45
3074 4199 6.677431 GCTGCAAAGTTAAGAAGGAGATGATG 60.677 42.308 0.00 0.00 0.00 3.07
3075 4200 5.124457 TGCAAAGTTAAGAAGGAGATGATGC 59.876 40.000 0.00 0.00 0.00 3.91
3076 4201 5.728898 GCAAAGTTAAGAAGGAGATGATGCG 60.729 44.000 0.00 0.00 0.00 4.73
3077 4202 4.744795 AGTTAAGAAGGAGATGATGCGT 57.255 40.909 0.00 0.00 0.00 5.24
3078 4203 4.437239 AGTTAAGAAGGAGATGATGCGTG 58.563 43.478 0.00 0.00 0.00 5.34
3079 4204 4.081420 AGTTAAGAAGGAGATGATGCGTGT 60.081 41.667 0.00 0.00 0.00 4.49
3080 4205 2.593346 AGAAGGAGATGATGCGTGTC 57.407 50.000 0.00 0.00 0.00 3.67
3081 4206 2.106566 AGAAGGAGATGATGCGTGTCT 58.893 47.619 0.00 0.00 0.00 3.41
3082 4207 2.159128 AGAAGGAGATGATGCGTGTCTG 60.159 50.000 0.00 0.00 0.00 3.51
3083 4208 0.179089 AGGAGATGATGCGTGTCTGC 60.179 55.000 2.32 2.32 0.00 4.26
3084 4209 0.179089 GGAGATGATGCGTGTCTGCT 60.179 55.000 3.13 0.00 35.36 4.24
3085 4210 0.928922 GAGATGATGCGTGTCTGCTG 59.071 55.000 0.00 0.00 35.36 4.41
3086 4211 0.248565 AGATGATGCGTGTCTGCTGT 59.751 50.000 0.00 0.00 35.36 4.40
3087 4212 0.372679 GATGATGCGTGTCTGCTGTG 59.627 55.000 0.00 0.00 35.36 3.66
3088 4213 0.037046 ATGATGCGTGTCTGCTGTGA 60.037 50.000 0.00 0.00 35.36 3.58
3089 4214 0.668401 TGATGCGTGTCTGCTGTGAG 60.668 55.000 0.00 0.00 35.36 3.51
3090 4215 0.668706 GATGCGTGTCTGCTGTGAGT 60.669 55.000 0.00 0.00 35.36 3.41
3091 4216 0.603065 ATGCGTGTCTGCTGTGAGTA 59.397 50.000 0.00 0.00 35.36 2.59
3092 4217 0.603065 TGCGTGTCTGCTGTGAGTAT 59.397 50.000 0.00 0.00 35.36 2.12
3093 4218 1.816224 TGCGTGTCTGCTGTGAGTATA 59.184 47.619 0.00 0.00 35.36 1.47
3094 4219 2.230266 TGCGTGTCTGCTGTGAGTATAA 59.770 45.455 0.00 0.00 35.36 0.98
3095 4220 3.119137 TGCGTGTCTGCTGTGAGTATAAT 60.119 43.478 0.00 0.00 35.36 1.28
3096 4221 3.487574 GCGTGTCTGCTGTGAGTATAATC 59.512 47.826 0.00 0.00 0.00 1.75
3097 4222 4.672409 CGTGTCTGCTGTGAGTATAATCA 58.328 43.478 0.00 0.00 0.00 2.57
3098 4223 4.737279 CGTGTCTGCTGTGAGTATAATCAG 59.263 45.833 2.50 0.00 0.00 2.90
3105 4230 6.718454 GCTGTGAGTATAATCAGCTAATGG 57.282 41.667 2.50 0.00 46.35 3.16
3106 4231 6.459066 GCTGTGAGTATAATCAGCTAATGGA 58.541 40.000 2.50 0.00 46.35 3.41
3107 4232 6.931281 GCTGTGAGTATAATCAGCTAATGGAA 59.069 38.462 2.50 0.00 46.35 3.53
3108 4233 7.605691 GCTGTGAGTATAATCAGCTAATGGAAT 59.394 37.037 2.50 0.00 46.35 3.01
3109 4234 8.837788 TGTGAGTATAATCAGCTAATGGAATG 57.162 34.615 2.50 0.00 0.00 2.67
3110 4235 7.879677 TGTGAGTATAATCAGCTAATGGAATGG 59.120 37.037 2.50 0.00 0.00 3.16
3111 4236 8.097038 GTGAGTATAATCAGCTAATGGAATGGA 58.903 37.037 2.50 0.00 0.00 3.41
3112 4237 8.829746 TGAGTATAATCAGCTAATGGAATGGAT 58.170 33.333 0.00 0.00 0.00 3.41
3113 4238 9.107177 GAGTATAATCAGCTAATGGAATGGATG 57.893 37.037 0.00 0.00 0.00 3.51
3114 4239 8.051535 AGTATAATCAGCTAATGGAATGGATGG 58.948 37.037 0.00 0.00 0.00 3.51
3115 4240 4.736611 ATCAGCTAATGGAATGGATGGT 57.263 40.909 0.00 0.00 0.00 3.55
3116 4241 4.090761 TCAGCTAATGGAATGGATGGTC 57.909 45.455 0.00 0.00 0.00 4.02
3117 4242 3.459227 TCAGCTAATGGAATGGATGGTCA 59.541 43.478 0.00 0.00 0.00 4.02
3118 4243 4.079844 TCAGCTAATGGAATGGATGGTCAA 60.080 41.667 0.00 0.00 0.00 3.18
3119 4244 4.646040 CAGCTAATGGAATGGATGGTCAAA 59.354 41.667 0.00 0.00 0.00 2.69
3120 4245 5.127519 CAGCTAATGGAATGGATGGTCAAAA 59.872 40.000 0.00 0.00 0.00 2.44
3121 4246 5.361857 AGCTAATGGAATGGATGGTCAAAAG 59.638 40.000 0.00 0.00 0.00 2.27
3122 4247 5.127682 GCTAATGGAATGGATGGTCAAAAGT 59.872 40.000 0.00 0.00 0.00 2.66
3123 4248 6.351286 GCTAATGGAATGGATGGTCAAAAGTT 60.351 38.462 0.00 0.00 0.00 2.66
3124 4249 7.147915 GCTAATGGAATGGATGGTCAAAAGTTA 60.148 37.037 0.00 0.00 0.00 2.24
3125 4250 6.780457 ATGGAATGGATGGTCAAAAGTTAG 57.220 37.500 0.00 0.00 0.00 2.34
3126 4251 4.462483 TGGAATGGATGGTCAAAAGTTAGC 59.538 41.667 0.00 0.00 0.00 3.09
3127 4252 4.462483 GGAATGGATGGTCAAAAGTTAGCA 59.538 41.667 0.00 0.00 0.00 3.49
3128 4253 5.393461 GGAATGGATGGTCAAAAGTTAGCAG 60.393 44.000 0.00 0.00 0.00 4.24
3129 4254 3.420893 TGGATGGTCAAAAGTTAGCAGG 58.579 45.455 0.00 0.00 0.00 4.85
3130 4255 3.181434 TGGATGGTCAAAAGTTAGCAGGT 60.181 43.478 0.00 0.00 0.00 4.00
3131 4256 3.191371 GGATGGTCAAAAGTTAGCAGGTG 59.809 47.826 0.00 0.00 0.00 4.00
3132 4257 1.953686 TGGTCAAAAGTTAGCAGGTGC 59.046 47.619 0.00 0.00 42.49 5.01
3149 4274 2.194460 GCGAGTAGCTGGAGAAGGT 58.806 57.895 0.00 0.00 44.04 3.50
3150 4275 0.533032 GCGAGTAGCTGGAGAAGGTT 59.467 55.000 0.00 0.00 44.04 3.50
3151 4276 1.066787 GCGAGTAGCTGGAGAAGGTTT 60.067 52.381 0.00 0.00 44.04 3.27
3210 4358 4.970662 ATTTGCATATCTCGTTTGCTGT 57.029 36.364 0.00 0.00 37.28 4.40
3213 4361 3.073678 TGCATATCTCGTTTGCTGTTGT 58.926 40.909 0.00 0.00 37.28 3.32
3224 4372 4.269844 CGTTTGCTGTTGTTTTATTTGCCT 59.730 37.500 0.00 0.00 0.00 4.75
3226 4374 4.399004 TGCTGTTGTTTTATTTGCCTGT 57.601 36.364 0.00 0.00 0.00 4.00
3230 4378 4.602995 TGTTGTTTTATTTGCCTGTCGAC 58.397 39.130 9.11 9.11 0.00 4.20
3236 4384 2.665649 ATTTGCCTGTCGACGTATCA 57.334 45.000 11.62 3.36 0.00 2.15
3238 4386 1.921243 TTGCCTGTCGACGTATCATG 58.079 50.000 11.62 0.00 0.00 3.07
3260 4408 2.338577 ACAGATGGTATCTTGCCTGC 57.661 50.000 0.00 0.00 37.58 4.85
3264 4412 2.158842 AGATGGTATCTTGCCTGCTGTC 60.159 50.000 0.00 0.00 35.76 3.51
3267 4415 1.405526 GGTATCTTGCCTGCTGTCGAA 60.406 52.381 0.00 0.00 0.00 3.71
3279 4427 4.201851 CCTGCTGTCGAAATAAATGGTCAG 60.202 45.833 0.00 0.00 0.00 3.51
3289 4437 6.401688 CGAAATAAATGGTCAGCGTGTTCTTA 60.402 38.462 0.00 0.00 0.00 2.10
3291 4439 2.094762 ATGGTCAGCGTGTTCTTACC 57.905 50.000 0.00 0.00 32.36 2.85
3293 4441 1.414919 TGGTCAGCGTGTTCTTACCTT 59.585 47.619 0.00 0.00 32.82 3.50
3294 4442 1.798813 GGTCAGCGTGTTCTTACCTTG 59.201 52.381 0.00 0.00 29.82 3.61
3295 4443 2.547218 GGTCAGCGTGTTCTTACCTTGA 60.547 50.000 0.00 0.00 29.82 3.02
3296 4444 2.475487 GTCAGCGTGTTCTTACCTTGAC 59.525 50.000 0.00 0.00 0.00 3.18
3297 4445 1.455786 CAGCGTGTTCTTACCTTGACG 59.544 52.381 0.00 0.00 0.00 4.35
3298 4446 1.338973 AGCGTGTTCTTACCTTGACGA 59.661 47.619 0.00 0.00 0.00 4.20
3299 4447 1.454653 GCGTGTTCTTACCTTGACGAC 59.545 52.381 0.00 0.00 0.00 4.34
3301 4473 1.454653 GTGTTCTTACCTTGACGACGC 59.545 52.381 0.00 0.00 0.00 5.19
3303 4475 0.387622 TTCTTACCTTGACGACGCCG 60.388 55.000 0.00 0.00 42.50 6.46
3323 4495 2.499205 CCCACTGCGCCGAAGATA 59.501 61.111 4.18 0.00 0.00 1.98
3325 4497 0.946221 CCCACTGCGCCGAAGATATC 60.946 60.000 4.18 0.00 0.00 1.63
3327 4499 1.606480 CCACTGCGCCGAAGATATCAT 60.606 52.381 4.18 0.00 0.00 2.45
3328 4500 2.138320 CACTGCGCCGAAGATATCATT 58.862 47.619 4.18 0.00 0.00 2.57
3329 4501 3.317150 CACTGCGCCGAAGATATCATTA 58.683 45.455 4.18 0.00 0.00 1.90
3330 4502 3.740832 CACTGCGCCGAAGATATCATTAA 59.259 43.478 4.18 0.00 0.00 1.40
3331 4503 3.990469 ACTGCGCCGAAGATATCATTAAG 59.010 43.478 4.18 0.00 0.00 1.85
3333 4505 2.673368 GCGCCGAAGATATCATTAAGGG 59.327 50.000 5.32 0.00 0.00 3.95
3335 4507 4.566004 CGCCGAAGATATCATTAAGGGAA 58.434 43.478 5.32 0.00 0.00 3.97
3345 4644 3.347216 TCATTAAGGGAAGCTGCTTGAC 58.653 45.455 21.25 12.09 0.00 3.18
3350 4649 1.891150 AGGGAAGCTGCTTGACAAATG 59.109 47.619 21.25 0.00 0.00 2.32
3376 4675 0.254178 TGCTCATCTCCCCTGCTTTC 59.746 55.000 0.00 0.00 0.00 2.62
3391 4690 3.626930 TGCTTTCCAACCATACATACCC 58.373 45.455 0.00 0.00 0.00 3.69
3392 4691 3.268334 TGCTTTCCAACCATACATACCCT 59.732 43.478 0.00 0.00 0.00 4.34
3409 4708 2.780010 ACCCTATGGATGCTTGCTTACT 59.220 45.455 0.00 0.00 34.81 2.24
3410 4709 3.181450 ACCCTATGGATGCTTGCTTACTC 60.181 47.826 0.00 0.00 34.81 2.59
3415 4714 0.933796 GATGCTTGCTTACTCGGAGC 59.066 55.000 4.58 0.00 40.53 4.70
3443 4742 1.070758 TCTGCTGGAAGGTTGTCTGTC 59.929 52.381 0.00 0.00 0.00 3.51
3450 4749 2.103263 GGAAGGTTGTCTGTCACTGTCT 59.897 50.000 0.00 0.00 0.00 3.41
3490 4789 2.427095 ACCAAAGGTCAGTGCTGTTTTC 59.573 45.455 0.00 0.00 0.00 2.29
3491 4790 2.689983 CCAAAGGTCAGTGCTGTTTTCT 59.310 45.455 0.00 0.00 0.00 2.52
3494 4793 0.040958 GGTCAGTGCTGTTTTCTGCG 60.041 55.000 0.00 0.00 45.64 5.18
3499 4798 2.975851 CAGTGCTGTTTTCTGCGATTTC 59.024 45.455 0.00 0.00 45.64 2.17
3500 4799 2.030805 AGTGCTGTTTTCTGCGATTTCC 60.031 45.455 0.00 0.00 45.64 3.13
3501 4800 1.269448 TGCTGTTTTCTGCGATTTCCC 59.731 47.619 0.00 0.00 45.64 3.97
3502 4801 1.402852 GCTGTTTTCTGCGATTTCCCC 60.403 52.381 0.00 0.00 35.27 4.81
3503 4802 1.885887 CTGTTTTCTGCGATTTCCCCA 59.114 47.619 0.00 0.00 0.00 4.96
3504 4803 2.295909 CTGTTTTCTGCGATTTCCCCAA 59.704 45.455 0.00 0.00 0.00 4.12
3505 4804 2.035321 TGTTTTCTGCGATTTCCCCAAC 59.965 45.455 0.00 0.00 0.00 3.77
3506 4805 2.286365 TTTCTGCGATTTCCCCAACT 57.714 45.000 0.00 0.00 0.00 3.16
3507 4806 1.533625 TTCTGCGATTTCCCCAACTG 58.466 50.000 0.00 0.00 0.00 3.16
3508 4807 0.400213 TCTGCGATTTCCCCAACTGT 59.600 50.000 0.00 0.00 0.00 3.55
3509 4808 1.202879 TCTGCGATTTCCCCAACTGTT 60.203 47.619 0.00 0.00 0.00 3.16
3510 4809 1.613437 CTGCGATTTCCCCAACTGTTT 59.387 47.619 0.00 0.00 0.00 2.83
3511 4810 2.035632 TGCGATTTCCCCAACTGTTTT 58.964 42.857 0.00 0.00 0.00 2.43
3512 4811 2.432510 TGCGATTTCCCCAACTGTTTTT 59.567 40.909 0.00 0.00 0.00 1.94
3513 4812 3.057019 GCGATTTCCCCAACTGTTTTTC 58.943 45.455 0.00 0.00 0.00 2.29
3514 4813 3.243737 GCGATTTCCCCAACTGTTTTTCT 60.244 43.478 0.00 0.00 0.00 2.52
3515 4814 4.739436 GCGATTTCCCCAACTGTTTTTCTT 60.739 41.667 0.00 0.00 0.00 2.52
3516 4815 4.982295 CGATTTCCCCAACTGTTTTTCTTC 59.018 41.667 0.00 0.00 0.00 2.87
3517 4816 5.451242 CGATTTCCCCAACTGTTTTTCTTCA 60.451 40.000 0.00 0.00 0.00 3.02
3518 4817 5.948742 TTTCCCCAACTGTTTTTCTTCAT 57.051 34.783 0.00 0.00 0.00 2.57
3519 4818 7.523052 CGATTTCCCCAACTGTTTTTCTTCATA 60.523 37.037 0.00 0.00 0.00 2.15
3520 4819 7.610580 TTTCCCCAACTGTTTTTCTTCATAT 57.389 32.000 0.00 0.00 0.00 1.78
3521 4820 7.610580 TTCCCCAACTGTTTTTCTTCATATT 57.389 32.000 0.00 0.00 0.00 1.28
3522 4821 8.713708 TTCCCCAACTGTTTTTCTTCATATTA 57.286 30.769 0.00 0.00 0.00 0.98
3523 4822 8.893563 TCCCCAACTGTTTTTCTTCATATTAT 57.106 30.769 0.00 0.00 0.00 1.28
3524 4823 9.320295 TCCCCAACTGTTTTTCTTCATATTATT 57.680 29.630 0.00 0.00 0.00 1.40
3525 4824 9.942850 CCCCAACTGTTTTTCTTCATATTATTT 57.057 29.630 0.00 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.203723 GCACCATAGCTTTACATAAGGAAGAG 59.796 42.308 0.00 0.00 0.00 2.85
3 4 4.814234 CGCACCATAGCTTTACATAAGGAA 59.186 41.667 0.00 0.00 0.00 3.36
4 5 4.377021 CGCACCATAGCTTTACATAAGGA 58.623 43.478 0.00 0.00 0.00 3.36
5 6 3.058914 GCGCACCATAGCTTTACATAAGG 60.059 47.826 0.30 0.00 0.00 2.69
7 8 3.804036 AGCGCACCATAGCTTTACATAA 58.196 40.909 11.47 0.00 41.52 1.90
9 10 2.158900 AGAGCGCACCATAGCTTTACAT 60.159 45.455 11.47 0.00 44.69 2.29
11 12 1.941325 AGAGCGCACCATAGCTTTAC 58.059 50.000 11.47 0.00 44.69 2.01
12 13 2.677836 CAAAGAGCGCACCATAGCTTTA 59.322 45.455 11.47 0.00 44.69 1.85
13 14 1.470098 CAAAGAGCGCACCATAGCTTT 59.530 47.619 11.47 4.59 44.69 3.51
14 15 1.089920 CAAAGAGCGCACCATAGCTT 58.910 50.000 11.47 0.00 44.69 3.74
16 17 0.097674 CACAAAGAGCGCACCATAGC 59.902 55.000 11.47 0.00 0.00 2.97
17 18 1.442769 ACACAAAGAGCGCACCATAG 58.557 50.000 11.47 0.00 0.00 2.23
18 19 2.028476 AGTACACAAAGAGCGCACCATA 60.028 45.455 11.47 0.00 0.00 2.74
19 20 1.156736 GTACACAAAGAGCGCACCAT 58.843 50.000 11.47 0.00 0.00 3.55
20 21 0.105964 AGTACACAAAGAGCGCACCA 59.894 50.000 11.47 0.00 0.00 4.17
21 22 0.790814 GAGTACACAAAGAGCGCACC 59.209 55.000 11.47 0.00 0.00 5.01
22 23 1.721926 GAGAGTACACAAAGAGCGCAC 59.278 52.381 11.47 2.25 0.00 5.34
23 24 1.339929 TGAGAGTACACAAAGAGCGCA 59.660 47.619 11.47 0.00 0.00 6.09
24 25 2.065993 TGAGAGTACACAAAGAGCGC 57.934 50.000 0.00 0.00 0.00 5.92
25 26 5.403897 TTTTTGAGAGTACACAAAGAGCG 57.596 39.130 0.00 0.00 37.72 5.03
72 73 8.038944 TCTACAAGTGGGACAATATTACAAGTC 58.961 37.037 0.00 0.00 44.16 3.01
73 74 7.913789 TCTACAAGTGGGACAATATTACAAGT 58.086 34.615 0.00 0.00 44.16 3.16
87 88 7.452880 TTGATTTCATTTCTCTACAAGTGGG 57.547 36.000 0.00 0.00 0.00 4.61
88 89 8.571336 AGTTTGATTTCATTTCTCTACAAGTGG 58.429 33.333 0.00 0.00 0.00 4.00
108 109 2.777094 TCGATTCACATGCCAGTTTGA 58.223 42.857 0.00 0.00 0.00 2.69
115 116 3.871006 TGTAACTGATCGATTCACATGCC 59.129 43.478 0.00 0.00 0.00 4.40
116 117 5.163864 TGTTGTAACTGATCGATTCACATGC 60.164 40.000 0.00 0.00 0.00 4.06
118 119 5.931724 TGTGTTGTAACTGATCGATTCACAT 59.068 36.000 0.00 0.00 0.00 3.21
156 157 2.662535 ACATATGCTGGCATGCCTAA 57.337 45.000 35.53 21.64 37.82 2.69
160 161 3.928727 ATGTAACATATGCTGGCATGC 57.071 42.857 17.09 9.90 37.82 4.06
186 187 3.573967 GTCCTTCATGTTCACACCCATTT 59.426 43.478 0.00 0.00 0.00 2.32
210 223 5.142061 TGCGACCTCTTAAATAAGTGTGA 57.858 39.130 0.46 0.00 34.93 3.58
229 242 3.067461 ACTCAAATAGGAGAGCTACTGCG 59.933 47.826 0.00 0.00 41.86 5.18
279 295 0.329261 CCTGATGCAGACCCTCCAAA 59.671 55.000 0.00 0.00 32.44 3.28
310 326 5.468540 TCTGATATTGGTAATGGGAGACG 57.531 43.478 0.00 0.00 0.00 4.18
316 332 8.625786 TGACATGATTCTGATATTGGTAATGG 57.374 34.615 0.00 0.00 0.00 3.16
322 338 8.794335 ATCTGATGACATGATTCTGATATTGG 57.206 34.615 0.00 0.00 0.00 3.16
335 351 6.427242 CCTTACCATTCTGATCTGATGACATG 59.573 42.308 2.84 4.42 0.00 3.21
336 352 6.531923 CCTTACCATTCTGATCTGATGACAT 58.468 40.000 2.84 0.00 0.00 3.06
390 406 6.264518 AGCTCCTTGGTTTTATCGAAGAAAAA 59.735 34.615 9.44 5.23 43.58 1.94
395 411 5.420409 ACTAGCTCCTTGGTTTTATCGAAG 58.580 41.667 0.00 0.00 0.00 3.79
404 420 9.435570 TTTCTCTTATATACTAGCTCCTTGGTT 57.564 33.333 0.00 0.00 0.00 3.67
499 1260 2.897326 GTTGGTCCAAAGCCTATGGTTT 59.103 45.455 5.69 0.00 42.66 3.27
521 1282 1.697432 GGCCACATGTATAGGTGCCTA 59.303 52.381 0.00 0.00 37.28 3.93
533 1294 3.197333 TCATTAATTGGGTTGGCCACATG 59.803 43.478 3.88 0.00 36.17 3.21
536 1297 3.260632 ACTTCATTAATTGGGTTGGCCAC 59.739 43.478 3.88 0.00 36.17 5.01
557 1396 7.376072 GCTATGTTAGTGTCAACAAAACTCAAC 59.624 37.037 9.64 0.00 41.50 3.18
560 1399 6.954944 TGCTATGTTAGTGTCAACAAAACTC 58.045 36.000 9.64 0.00 41.50 3.01
565 1404 8.528643 ACTACTATGCTATGTTAGTGTCAACAA 58.471 33.333 0.00 0.00 41.50 2.83
620 1644 5.051891 AGATGTGCACATGTAAGCTTTTC 57.948 39.130 35.92 18.20 36.57 2.29
625 1649 2.002586 ACGAGATGTGCACATGTAAGC 58.997 47.619 35.92 20.70 36.57 3.09
640 1664 4.430137 AAATACACTAGCAACGACGAGA 57.570 40.909 0.00 0.00 0.00 4.04
641 1665 6.908820 TGTATAAATACACTAGCAACGACGAG 59.091 38.462 0.00 0.00 38.28 4.18
647 1671 9.590451 TTGGTACTGTATAAATACACTAGCAAC 57.410 33.333 19.35 7.33 40.63 4.17
705 1729 1.380380 CTCAACATCCCTTGCCCCC 60.380 63.158 0.00 0.00 0.00 5.40
706 1730 1.380380 CCTCAACATCCCTTGCCCC 60.380 63.158 0.00 0.00 0.00 5.80
707 1731 2.054453 GCCTCAACATCCCTTGCCC 61.054 63.158 0.00 0.00 0.00 5.36
708 1732 1.304381 TGCCTCAACATCCCTTGCC 60.304 57.895 0.00 0.00 0.00 4.52
709 1733 1.318158 CCTGCCTCAACATCCCTTGC 61.318 60.000 0.00 0.00 0.00 4.01
710 1734 0.038744 ACCTGCCTCAACATCCCTTG 59.961 55.000 0.00 0.00 0.00 3.61
711 1735 0.779997 AACCTGCCTCAACATCCCTT 59.220 50.000 0.00 0.00 0.00 3.95
712 1736 1.561542 CTAACCTGCCTCAACATCCCT 59.438 52.381 0.00 0.00 0.00 4.20
713 1737 1.559682 TCTAACCTGCCTCAACATCCC 59.440 52.381 0.00 0.00 0.00 3.85
714 1738 2.501723 TCTCTAACCTGCCTCAACATCC 59.498 50.000 0.00 0.00 0.00 3.51
715 1739 3.449018 TCTCTCTAACCTGCCTCAACATC 59.551 47.826 0.00 0.00 0.00 3.06
716 1740 3.445008 TCTCTCTAACCTGCCTCAACAT 58.555 45.455 0.00 0.00 0.00 2.71
717 1741 2.828520 CTCTCTCTAACCTGCCTCAACA 59.171 50.000 0.00 0.00 0.00 3.33
718 1742 2.167487 CCTCTCTCTAACCTGCCTCAAC 59.833 54.545 0.00 0.00 0.00 3.18
719 1743 2.461695 CCTCTCTCTAACCTGCCTCAA 58.538 52.381 0.00 0.00 0.00 3.02
720 1744 1.962402 GCCTCTCTCTAACCTGCCTCA 60.962 57.143 0.00 0.00 0.00 3.86
721 1745 0.750249 GCCTCTCTCTAACCTGCCTC 59.250 60.000 0.00 0.00 0.00 4.70
722 1746 0.689412 GGCCTCTCTCTAACCTGCCT 60.689 60.000 0.00 0.00 34.61 4.75
723 1747 0.978146 TGGCCTCTCTCTAACCTGCC 60.978 60.000 3.32 0.00 37.90 4.85
724 1748 0.905357 TTGGCCTCTCTCTAACCTGC 59.095 55.000 3.32 0.00 0.00 4.85
725 1749 3.198635 TGATTTGGCCTCTCTCTAACCTG 59.801 47.826 3.32 0.00 0.00 4.00
726 1750 3.454858 TGATTTGGCCTCTCTCTAACCT 58.545 45.455 3.32 0.00 0.00 3.50
727 1751 3.914426 TGATTTGGCCTCTCTCTAACC 57.086 47.619 3.32 0.00 0.00 2.85
728 1752 9.213799 CTTTATATGATTTGGCCTCTCTCTAAC 57.786 37.037 3.32 0.00 0.00 2.34
729 1753 9.159254 TCTTTATATGATTTGGCCTCTCTCTAA 57.841 33.333 3.32 0.00 0.00 2.10
730 1754 8.589338 GTCTTTATATGATTTGGCCTCTCTCTA 58.411 37.037 3.32 0.00 0.00 2.43
731 1755 7.071698 TGTCTTTATATGATTTGGCCTCTCTCT 59.928 37.037 3.32 0.00 0.00 3.10
732 1756 7.220030 TGTCTTTATATGATTTGGCCTCTCTC 58.780 38.462 3.32 0.00 0.00 3.20
733 1757 7.141758 TGTCTTTATATGATTTGGCCTCTCT 57.858 36.000 3.32 0.00 0.00 3.10
734 1758 7.574592 GCATGTCTTTATATGATTTGGCCTCTC 60.575 40.741 3.32 0.00 0.00 3.20
735 1759 6.208204 GCATGTCTTTATATGATTTGGCCTCT 59.792 38.462 3.32 0.00 0.00 3.69
736 1760 6.208204 AGCATGTCTTTATATGATTTGGCCTC 59.792 38.462 3.32 0.00 0.00 4.70
737 1761 6.073314 AGCATGTCTTTATATGATTTGGCCT 58.927 36.000 3.32 0.00 0.00 5.19
738 1762 6.336842 AGCATGTCTTTATATGATTTGGCC 57.663 37.500 0.00 0.00 0.00 5.36
739 1763 8.652810 AAAAGCATGTCTTTATATGATTTGGC 57.347 30.769 13.22 0.00 40.53 4.52
759 1783 5.410067 TCATGGTTATTTGCTGCTAAAAGC 58.590 37.500 0.00 7.41 43.82 3.51
760 1784 8.483307 AATTCATGGTTATTTGCTGCTAAAAG 57.517 30.769 0.00 0.00 0.00 2.27
761 1785 8.313292 AGAATTCATGGTTATTTGCTGCTAAAA 58.687 29.630 8.44 0.00 0.00 1.52
762 1786 7.760794 CAGAATTCATGGTTATTTGCTGCTAAA 59.239 33.333 8.44 0.45 0.00 1.85
763 1787 7.259882 CAGAATTCATGGTTATTTGCTGCTAA 58.740 34.615 8.44 0.00 0.00 3.09
764 1788 6.681120 GCAGAATTCATGGTTATTTGCTGCTA 60.681 38.462 8.44 0.00 41.12 3.49
765 1789 5.657474 CAGAATTCATGGTTATTTGCTGCT 58.343 37.500 8.44 0.00 0.00 4.24
766 1790 4.269363 GCAGAATTCATGGTTATTTGCTGC 59.731 41.667 8.44 0.00 38.29 5.25
767 1791 5.290158 GTGCAGAATTCATGGTTATTTGCTG 59.710 40.000 8.44 0.00 0.00 4.41
768 1792 5.186409 AGTGCAGAATTCATGGTTATTTGCT 59.814 36.000 8.44 0.00 0.00 3.91
769 1793 5.290158 CAGTGCAGAATTCATGGTTATTTGC 59.710 40.000 8.44 5.94 0.00 3.68
770 1794 6.392354 ACAGTGCAGAATTCATGGTTATTTG 58.608 36.000 8.44 0.00 0.00 2.32
771 1795 6.594788 ACAGTGCAGAATTCATGGTTATTT 57.405 33.333 8.44 0.00 0.00 1.40
772 1796 6.209192 TGAACAGTGCAGAATTCATGGTTATT 59.791 34.615 8.44 0.00 0.00 1.40
773 1797 5.711506 TGAACAGTGCAGAATTCATGGTTAT 59.288 36.000 8.44 0.00 0.00 1.89
774 1798 5.069318 TGAACAGTGCAGAATTCATGGTTA 58.931 37.500 8.44 0.00 0.00 2.85
775 1799 3.890756 TGAACAGTGCAGAATTCATGGTT 59.109 39.130 8.44 3.29 0.00 3.67
776 1800 3.489355 TGAACAGTGCAGAATTCATGGT 58.511 40.909 8.44 0.00 0.00 3.55
777 1801 4.157105 TGATGAACAGTGCAGAATTCATGG 59.843 41.667 18.95 0.00 40.88 3.66
778 1802 5.305139 TGATGAACAGTGCAGAATTCATG 57.695 39.130 18.95 4.53 40.88 3.07
779 1803 5.562506 CTGATGAACAGTGCAGAATTCAT 57.437 39.130 15.58 15.58 42.91 2.57
800 1824 9.886132 ACATCGAGGATTTGTAGTTAATTTACT 57.114 29.630 3.06 2.26 0.00 2.24
805 1829 9.751542 CTCTAACATCGAGGATTTGTAGTTAAT 57.248 33.333 3.06 0.00 0.00 1.40
818 1842 1.749033 GCCCCCTCTAACATCGAGG 59.251 63.158 0.00 0.00 46.11 4.63
819 1843 1.048724 TGGCCCCCTCTAACATCGAG 61.049 60.000 0.00 0.00 0.00 4.04
820 1844 1.002403 TGGCCCCCTCTAACATCGA 59.998 57.895 0.00 0.00 0.00 3.59
821 1845 1.447643 CTGGCCCCCTCTAACATCG 59.552 63.158 0.00 0.00 0.00 3.84
822 1846 1.709994 CCCTGGCCCCCTCTAACATC 61.710 65.000 0.00 0.00 0.00 3.06
823 1847 1.697754 CCCTGGCCCCCTCTAACAT 60.698 63.158 0.00 0.00 0.00 2.71
824 1848 2.286121 CCCTGGCCCCCTCTAACA 60.286 66.667 0.00 0.00 0.00 2.41
825 1849 3.810188 GCCCTGGCCCCCTCTAAC 61.810 72.222 0.00 0.00 34.56 2.34
861 1885 1.823169 TTGGTACCAGTGGCGGAGAC 61.823 60.000 15.65 0.00 0.00 3.36
862 1886 0.907704 ATTGGTACCAGTGGCGGAGA 60.908 55.000 15.65 0.00 0.00 3.71
863 1887 0.035439 AATTGGTACCAGTGGCGGAG 60.035 55.000 15.65 0.00 0.00 4.63
864 1888 0.322098 CAATTGGTACCAGTGGCGGA 60.322 55.000 15.65 0.00 0.00 5.54
865 1889 0.322098 TCAATTGGTACCAGTGGCGG 60.322 55.000 21.39 9.16 0.00 6.13
866 1890 1.529226 TTCAATTGGTACCAGTGGCG 58.471 50.000 21.39 10.38 0.00 5.69
867 1891 3.088532 TCATTCAATTGGTACCAGTGGC 58.911 45.455 21.39 0.00 0.00 5.01
868 1892 4.078537 TGTCATTCAATTGGTACCAGTGG 58.921 43.478 21.39 14.98 0.00 4.00
869 1893 5.902613 ATGTCATTCAATTGGTACCAGTG 57.097 39.130 15.65 16.81 0.00 3.66
870 1894 6.721318 ACTATGTCATTCAATTGGTACCAGT 58.279 36.000 15.65 9.80 0.00 4.00
871 1895 8.908786 ATACTATGTCATTCAATTGGTACCAG 57.091 34.615 15.65 3.79 0.00 4.00
885 1909 5.533903 AGTTCCGTCCGTAATACTATGTCAT 59.466 40.000 0.00 0.00 0.00 3.06
888 1912 5.450965 CCAAGTTCCGTCCGTAATACTATGT 60.451 44.000 0.00 0.00 0.00 2.29
889 1913 4.980434 CCAAGTTCCGTCCGTAATACTATG 59.020 45.833 0.00 0.00 0.00 2.23
899 1923 2.814280 ATATAGCCAAGTTCCGTCCG 57.186 50.000 0.00 0.00 0.00 4.79
981 2019 4.064388 ACATGATTGACGTTGTGATCACA 58.936 39.130 24.56 24.56 39.98 3.58
992 2033 2.667969 TCTTGCGAGAACATGATTGACG 59.332 45.455 0.00 0.00 0.00 4.35
1030 2071 1.270358 GGGAAGAAGCAGAACGAGTGT 60.270 52.381 0.00 0.00 0.00 3.55
1240 2285 1.419374 GTCGCATGTGACGAAGAACT 58.581 50.000 22.64 0.00 41.93 3.01
1428 2473 0.815734 CAAGCCTCCATCCTTGCAAG 59.184 55.000 19.93 19.93 32.94 4.01
1714 2760 1.274712 CTTGAGCTTCCTCTCAGGGT 58.725 55.000 0.00 0.00 43.23 4.34
1778 2825 3.248024 ACATGTGTTGACCTTCCTCCTA 58.752 45.455 0.00 0.00 0.00 2.94
1841 2888 1.346722 GGGTCGTTGAGGAAGGAAGAA 59.653 52.381 0.00 0.00 0.00 2.52
1937 2984 7.233348 AGGTTGTAGAAAATCCATGTCAATGTT 59.767 33.333 0.00 0.00 31.27 2.71
1940 2987 7.605449 CAAGGTTGTAGAAAATCCATGTCAAT 58.395 34.615 0.00 0.00 0.00 2.57
2153 3202 0.961753 TGATATCATCAGCGGCGACT 59.038 50.000 12.98 4.18 33.59 4.18
2156 3205 0.372679 GCATGATATCATCAGCGGCG 59.627 55.000 15.49 0.51 43.53 6.46
2267 3316 5.615925 ACCACCTATCTGGATTGTAGTTC 57.384 43.478 0.00 0.00 39.71 3.01
2289 3338 0.690192 TTGTTGCCATCCTCCGAGAA 59.310 50.000 0.00 0.00 0.00 2.87
2312 3361 6.213600 AGAACTTGTGAGATGGTATGTACCTT 59.786 38.462 10.36 4.23 46.58 3.50
2319 3368 4.265073 GCCAAGAACTTGTGAGATGGTAT 58.735 43.478 12.54 0.00 38.85 2.73
2372 3421 0.582005 GCATAACCGCGATGTCCTTC 59.418 55.000 8.23 0.00 0.00 3.46
2544 3593 6.536224 GGCCACTAAGTACGTTTACATAACAT 59.464 38.462 0.00 0.00 0.00 2.71
2574 3625 2.292016 TGTGGGCAGTACAAAACATTCG 59.708 45.455 0.00 0.00 0.00 3.34
2577 3628 2.364002 GGTTGTGGGCAGTACAAAACAT 59.636 45.455 0.00 0.00 39.50 2.71
2672 3726 3.436704 CACACAACGGAGTAATCATTGCT 59.563 43.478 6.38 0.00 45.00 3.91
2686 3740 2.842208 ACACCATGTTTCACACAACG 57.158 45.000 0.00 0.00 39.50 4.10
2692 3746 4.022416 TGATGCCTTTACACCATGTTTCAC 60.022 41.667 0.00 0.00 0.00 3.18
2704 3758 9.077885 TGGAGGAAAATATTATGATGCCTTTAC 57.922 33.333 0.00 0.00 0.00 2.01
2731 3790 2.950309 ACATGTACCTAGTCTGCTACGG 59.050 50.000 0.00 0.00 0.00 4.02
2732 3791 3.003482 GGACATGTACCTAGTCTGCTACG 59.997 52.174 0.00 0.00 32.98 3.51
2733 3792 3.318557 GGGACATGTACCTAGTCTGCTAC 59.681 52.174 20.79 0.00 32.98 3.58
2813 3921 0.035317 AGCACATCTTTCTCGGCACA 59.965 50.000 0.00 0.00 0.00 4.57
2877 3991 5.050091 GCTTGCTAATTACATACACGCTCAT 60.050 40.000 0.00 0.00 0.00 2.90
2905 4024 5.330233 GGGGTCATCCTCCTTTTCTAAAAA 58.670 41.667 0.00 0.00 35.33 1.94
2906 4025 4.566907 CGGGGTCATCCTCCTTTTCTAAAA 60.567 45.833 0.00 0.00 35.33 1.52
2907 4026 3.054655 CGGGGTCATCCTCCTTTTCTAAA 60.055 47.826 0.00 0.00 35.33 1.85
2908 4027 2.504175 CGGGGTCATCCTCCTTTTCTAA 59.496 50.000 0.00 0.00 35.33 2.10
2909 4028 2.116238 CGGGGTCATCCTCCTTTTCTA 58.884 52.381 0.00 0.00 35.33 2.10
2911 4030 0.107165 CCGGGGTCATCCTCCTTTTC 60.107 60.000 0.00 0.00 35.33 2.29
2912 4031 1.999346 CCGGGGTCATCCTCCTTTT 59.001 57.895 0.00 0.00 35.33 2.27
2918 4037 4.095400 AGAGGCCGGGGTCATCCT 62.095 66.667 2.18 0.00 35.33 3.24
2919 4038 3.866582 CAGAGGCCGGGGTCATCC 61.867 72.222 2.18 0.00 0.00 3.51
2920 4039 4.554036 GCAGAGGCCGGGGTCATC 62.554 72.222 2.18 0.00 0.00 2.92
2923 4042 3.645268 AAATGCAGAGGCCGGGGTC 62.645 63.158 2.18 0.00 40.13 4.46
2924 4043 3.661648 AAATGCAGAGGCCGGGGT 61.662 61.111 2.18 0.00 40.13 4.95
2925 4044 3.142838 CAAATGCAGAGGCCGGGG 61.143 66.667 2.18 0.00 40.13 5.73
2926 4045 3.142838 CCAAATGCAGAGGCCGGG 61.143 66.667 2.18 0.00 40.13 5.73
2927 4046 3.142838 CCCAAATGCAGAGGCCGG 61.143 66.667 0.00 0.00 40.13 6.13
2928 4047 3.830192 GCCCAAATGCAGAGGCCG 61.830 66.667 0.00 0.00 39.60 6.13
2929 4048 3.830192 CGCCCAAATGCAGAGGCC 61.830 66.667 12.01 0.00 42.66 5.19
2930 4049 2.123428 ATCGCCCAAATGCAGAGGC 61.123 57.895 8.59 8.59 42.18 4.70
2931 4050 1.731700 CATCGCCCAAATGCAGAGG 59.268 57.895 0.00 0.00 0.00 3.69
2932 4051 1.065273 GCATCGCCCAAATGCAGAG 59.935 57.895 3.35 0.00 46.93 3.35
2933 4052 3.199551 GCATCGCCCAAATGCAGA 58.800 55.556 3.35 0.00 46.93 4.26
2937 4056 1.601162 GCTGTATGCATCGCCCAAATG 60.601 52.381 0.19 0.00 42.31 2.32
2938 4057 0.670162 GCTGTATGCATCGCCCAAAT 59.330 50.000 0.19 0.00 42.31 2.32
2939 4058 1.383456 GGCTGTATGCATCGCCCAAA 61.383 55.000 18.78 0.00 45.15 3.28
2940 4059 1.823470 GGCTGTATGCATCGCCCAA 60.823 57.895 18.78 0.00 45.15 4.12
2941 4060 2.203195 GGCTGTATGCATCGCCCA 60.203 61.111 18.78 5.90 45.15 5.36
2942 4061 1.174712 AATGGCTGTATGCATCGCCC 61.175 55.000 23.73 13.05 45.15 6.13
2943 4062 0.670162 AAATGGCTGTATGCATCGCC 59.330 50.000 21.34 21.34 45.15 5.54
2944 4063 2.497107 AAAATGGCTGTATGCATCGC 57.503 45.000 0.19 4.61 45.15 4.58
2945 4064 8.746922 AATTAATAAAATGGCTGTATGCATCG 57.253 30.769 0.19 0.00 45.15 3.84
2967 4086 9.574516 ACTTTGTAAGGTCTTGTGAGAATAATT 57.425 29.630 0.00 0.00 32.66 1.40
2972 4091 9.485206 GTATTACTTTGTAAGGTCTTGTGAGAA 57.515 33.333 0.00 0.00 32.66 2.87
2973 4092 8.644216 TGTATTACTTTGTAAGGTCTTGTGAGA 58.356 33.333 0.00 0.00 0.00 3.27
2974 4093 8.827177 TGTATTACTTTGTAAGGTCTTGTGAG 57.173 34.615 0.00 0.00 0.00 3.51
2975 4094 9.787435 ATTGTATTACTTTGTAAGGTCTTGTGA 57.213 29.630 0.00 0.00 0.00 3.58
3020 4139 8.395633 GCCCGCAAAAAGATATATATCGTAAAT 58.604 33.333 15.48 2.45 37.76 1.40
3021 4140 7.412129 CGCCCGCAAAAAGATATATATCGTAAA 60.412 37.037 15.48 0.00 37.76 2.01
3022 4141 6.035220 CGCCCGCAAAAAGATATATATCGTAA 59.965 38.462 15.48 0.00 37.76 3.18
3026 4150 5.560148 CACGCCCGCAAAAAGATATATATC 58.440 41.667 13.95 13.95 0.00 1.63
3031 4155 0.100503 GCACGCCCGCAAAAAGATAT 59.899 50.000 0.00 0.00 0.00 1.63
3032 4156 0.958382 AGCACGCCCGCAAAAAGATA 60.958 50.000 0.00 0.00 0.00 1.98
3033 4157 2.258286 GCACGCCCGCAAAAAGAT 59.742 55.556 0.00 0.00 0.00 2.40
3043 4167 0.387239 CTTAACTTTGCAGCACGCCC 60.387 55.000 0.00 0.00 41.33 6.13
3058 4183 4.160439 AGACACGCATCATCTCCTTCTTAA 59.840 41.667 0.00 0.00 0.00 1.85
3067 4192 0.248565 ACAGCAGACACGCATCATCT 59.751 50.000 0.00 0.00 0.00 2.90
3068 4193 0.372679 CACAGCAGACACGCATCATC 59.627 55.000 0.00 0.00 0.00 2.92
3069 4194 0.037046 TCACAGCAGACACGCATCAT 60.037 50.000 0.00 0.00 0.00 2.45
3070 4195 0.668401 CTCACAGCAGACACGCATCA 60.668 55.000 0.00 0.00 0.00 3.07
3071 4196 0.668706 ACTCACAGCAGACACGCATC 60.669 55.000 0.00 0.00 0.00 3.91
3072 4197 0.603065 TACTCACAGCAGACACGCAT 59.397 50.000 0.00 0.00 0.00 4.73
3073 4198 0.603065 ATACTCACAGCAGACACGCA 59.397 50.000 0.00 0.00 0.00 5.24
3074 4199 2.561733 TATACTCACAGCAGACACGC 57.438 50.000 0.00 0.00 0.00 5.34
3075 4200 4.672409 TGATTATACTCACAGCAGACACG 58.328 43.478 0.00 0.00 0.00 4.49
3083 4208 8.933807 CATTCCATTAGCTGATTATACTCACAG 58.066 37.037 0.00 0.00 0.00 3.66
3084 4209 7.879677 CCATTCCATTAGCTGATTATACTCACA 59.120 37.037 0.00 0.00 0.00 3.58
3085 4210 8.097038 TCCATTCCATTAGCTGATTATACTCAC 58.903 37.037 0.00 0.00 0.00 3.51
3086 4211 8.206126 TCCATTCCATTAGCTGATTATACTCA 57.794 34.615 0.00 0.00 0.00 3.41
3087 4212 9.107177 CATCCATTCCATTAGCTGATTATACTC 57.893 37.037 0.00 0.00 0.00 2.59
3088 4213 8.051535 CCATCCATTCCATTAGCTGATTATACT 58.948 37.037 0.00 0.00 0.00 2.12
3089 4214 7.831193 ACCATCCATTCCATTAGCTGATTATAC 59.169 37.037 0.00 0.00 0.00 1.47
3090 4215 7.932134 ACCATCCATTCCATTAGCTGATTATA 58.068 34.615 0.00 0.00 0.00 0.98
3091 4216 6.797707 ACCATCCATTCCATTAGCTGATTAT 58.202 36.000 0.00 0.00 0.00 1.28
3092 4217 6.183361 TGACCATCCATTCCATTAGCTGATTA 60.183 38.462 0.00 0.00 0.00 1.75
3093 4218 5.070823 ACCATCCATTCCATTAGCTGATT 57.929 39.130 0.00 0.00 0.00 2.57
3094 4219 4.105217 TGACCATCCATTCCATTAGCTGAT 59.895 41.667 0.00 0.00 0.00 2.90
3095 4220 3.459227 TGACCATCCATTCCATTAGCTGA 59.541 43.478 0.00 0.00 0.00 4.26
3096 4221 3.824133 TGACCATCCATTCCATTAGCTG 58.176 45.455 0.00 0.00 0.00 4.24
3097 4222 4.524802 TTGACCATCCATTCCATTAGCT 57.475 40.909 0.00 0.00 0.00 3.32
3098 4223 5.127682 ACTTTTGACCATCCATTCCATTAGC 59.872 40.000 0.00 0.00 0.00 3.09
3099 4224 6.780457 ACTTTTGACCATCCATTCCATTAG 57.220 37.500 0.00 0.00 0.00 1.73
3100 4225 7.147915 GCTAACTTTTGACCATCCATTCCATTA 60.148 37.037 0.00 0.00 0.00 1.90
3101 4226 6.351286 GCTAACTTTTGACCATCCATTCCATT 60.351 38.462 0.00 0.00 0.00 3.16
3102 4227 5.127682 GCTAACTTTTGACCATCCATTCCAT 59.872 40.000 0.00 0.00 0.00 3.41
3103 4228 4.462483 GCTAACTTTTGACCATCCATTCCA 59.538 41.667 0.00 0.00 0.00 3.53
3104 4229 4.462483 TGCTAACTTTTGACCATCCATTCC 59.538 41.667 0.00 0.00 0.00 3.01
3105 4230 5.393461 CCTGCTAACTTTTGACCATCCATTC 60.393 44.000 0.00 0.00 0.00 2.67
3106 4231 4.463891 CCTGCTAACTTTTGACCATCCATT 59.536 41.667 0.00 0.00 0.00 3.16
3107 4232 4.019174 CCTGCTAACTTTTGACCATCCAT 58.981 43.478 0.00 0.00 0.00 3.41
3108 4233 3.181434 ACCTGCTAACTTTTGACCATCCA 60.181 43.478 0.00 0.00 0.00 3.41
3109 4234 3.191371 CACCTGCTAACTTTTGACCATCC 59.809 47.826 0.00 0.00 0.00 3.51
3110 4235 3.366374 GCACCTGCTAACTTTTGACCATC 60.366 47.826 0.00 0.00 38.21 3.51
3111 4236 2.558359 GCACCTGCTAACTTTTGACCAT 59.442 45.455 0.00 0.00 38.21 3.55
3112 4237 1.953686 GCACCTGCTAACTTTTGACCA 59.046 47.619 0.00 0.00 38.21 4.02
3113 4238 1.069227 CGCACCTGCTAACTTTTGACC 60.069 52.381 0.00 0.00 39.32 4.02
3114 4239 1.871039 TCGCACCTGCTAACTTTTGAC 59.129 47.619 0.00 0.00 39.32 3.18
3115 4240 2.143122 CTCGCACCTGCTAACTTTTGA 58.857 47.619 0.00 0.00 39.32 2.69
3116 4241 1.873591 ACTCGCACCTGCTAACTTTTG 59.126 47.619 0.00 0.00 39.32 2.44
3117 4242 2.256117 ACTCGCACCTGCTAACTTTT 57.744 45.000 0.00 0.00 39.32 2.27
3118 4243 2.931320 GCTACTCGCACCTGCTAACTTT 60.931 50.000 0.00 0.00 39.32 2.66
3119 4244 1.404315 GCTACTCGCACCTGCTAACTT 60.404 52.381 0.00 0.00 39.32 2.66
3120 4245 0.173708 GCTACTCGCACCTGCTAACT 59.826 55.000 0.00 0.00 39.32 2.24
3121 4246 0.173708 AGCTACTCGCACCTGCTAAC 59.826 55.000 0.00 0.00 42.61 2.34
3122 4247 0.173481 CAGCTACTCGCACCTGCTAA 59.827 55.000 0.00 0.00 42.61 3.09
3123 4248 1.667154 CCAGCTACTCGCACCTGCTA 61.667 60.000 0.00 0.00 42.61 3.49
3124 4249 2.575993 CAGCTACTCGCACCTGCT 59.424 61.111 0.00 0.00 42.61 4.24
3125 4250 2.510238 CCAGCTACTCGCACCTGC 60.510 66.667 0.00 0.00 42.61 4.85
3126 4251 1.140589 CTCCAGCTACTCGCACCTG 59.859 63.158 0.00 0.00 42.61 4.00
3127 4252 0.612174 TTCTCCAGCTACTCGCACCT 60.612 55.000 0.00 0.00 42.61 4.00
3128 4253 0.179124 CTTCTCCAGCTACTCGCACC 60.179 60.000 0.00 0.00 42.61 5.01
3129 4254 0.179124 CCTTCTCCAGCTACTCGCAC 60.179 60.000 0.00 0.00 42.61 5.34
3130 4255 0.612174 ACCTTCTCCAGCTACTCGCA 60.612 55.000 0.00 0.00 42.61 5.10
3131 4256 0.533032 AACCTTCTCCAGCTACTCGC 59.467 55.000 0.00 0.00 39.57 5.03
3132 4257 3.695060 TCTAAACCTTCTCCAGCTACTCG 59.305 47.826 0.00 0.00 0.00 4.18
3133 4258 5.452636 CCATCTAAACCTTCTCCAGCTACTC 60.453 48.000 0.00 0.00 0.00 2.59
3134 4259 4.407296 CCATCTAAACCTTCTCCAGCTACT 59.593 45.833 0.00 0.00 0.00 2.57
3135 4260 4.162509 ACCATCTAAACCTTCTCCAGCTAC 59.837 45.833 0.00 0.00 0.00 3.58
3136 4261 4.362677 ACCATCTAAACCTTCTCCAGCTA 58.637 43.478 0.00 0.00 0.00 3.32
3137 4262 3.185455 ACCATCTAAACCTTCTCCAGCT 58.815 45.455 0.00 0.00 0.00 4.24
3138 4263 3.636153 ACCATCTAAACCTTCTCCAGC 57.364 47.619 0.00 0.00 0.00 4.85
3139 4264 6.301169 ACTTACCATCTAAACCTTCTCCAG 57.699 41.667 0.00 0.00 0.00 3.86
3140 4265 7.989947 ATACTTACCATCTAAACCTTCTCCA 57.010 36.000 0.00 0.00 0.00 3.86
3141 4266 9.682465 AAAATACTTACCATCTAAACCTTCTCC 57.318 33.333 0.00 0.00 0.00 3.71
3143 4268 8.957466 GCAAAATACTTACCATCTAAACCTTCT 58.043 33.333 0.00 0.00 0.00 2.85
3144 4269 8.736244 TGCAAAATACTTACCATCTAAACCTTC 58.264 33.333 0.00 0.00 0.00 3.46
3145 4270 8.644374 TGCAAAATACTTACCATCTAAACCTT 57.356 30.769 0.00 0.00 0.00 3.50
3146 4271 8.823220 ATGCAAAATACTTACCATCTAAACCT 57.177 30.769 0.00 0.00 0.00 3.50
3147 4272 9.301153 CAATGCAAAATACTTACCATCTAAACC 57.699 33.333 0.00 0.00 0.00 3.27
3183 4308 6.968904 AGCAAACGAGATATGCAAATACTTTG 59.031 34.615 0.00 0.00 42.45 2.77
3192 4317 3.073678 ACAACAGCAAACGAGATATGCA 58.926 40.909 0.00 0.00 42.45 3.96
3193 4318 3.747099 ACAACAGCAAACGAGATATGC 57.253 42.857 0.00 0.00 40.34 3.14
3194 4319 8.673626 AATAAAACAACAGCAAACGAGATATG 57.326 30.769 0.00 0.00 0.00 1.78
3196 4321 7.114247 GCAAATAAAACAACAGCAAACGAGATA 59.886 33.333 0.00 0.00 0.00 1.98
3202 4350 5.064579 ACAGGCAAATAAAACAACAGCAAAC 59.935 36.000 0.00 0.00 0.00 2.93
3210 4358 3.312973 ACGTCGACAGGCAAATAAAACAA 59.687 39.130 17.16 0.00 0.00 2.83
3213 4361 4.930405 TGATACGTCGACAGGCAAATAAAA 59.070 37.500 17.16 0.00 0.00 1.52
3224 4372 2.750712 TCTGTTCCATGATACGTCGACA 59.249 45.455 17.16 0.00 0.00 4.35
3226 4374 3.243401 CCATCTGTTCCATGATACGTCGA 60.243 47.826 0.00 0.00 0.00 4.20
3230 4378 6.030548 AGATACCATCTGTTCCATGATACG 57.969 41.667 0.00 0.00 38.44 3.06
3236 4384 3.461085 AGGCAAGATACCATCTGTTCCAT 59.539 43.478 0.00 0.00 40.13 3.41
3238 4386 3.209410 CAGGCAAGATACCATCTGTTCC 58.791 50.000 0.00 0.00 40.13 3.62
3260 4408 3.370978 ACGCTGACCATTTATTTCGACAG 59.629 43.478 0.00 0.00 0.00 3.51
3264 4412 3.740044 ACACGCTGACCATTTATTTCG 57.260 42.857 0.00 0.00 0.00 3.46
3267 4415 5.123344 GGTAAGAACACGCTGACCATTTATT 59.877 40.000 0.00 0.00 38.99 1.40
3279 4427 1.454653 GTCGTCAAGGTAAGAACACGC 59.545 52.381 0.00 0.00 0.00 5.34
3312 4484 2.673368 CCCTTAATGATATCTTCGGCGC 59.327 50.000 0.00 0.00 0.00 6.53
3314 4486 4.393371 GCTTCCCTTAATGATATCTTCGGC 59.607 45.833 3.98 0.00 0.00 5.54
3317 4489 6.237154 AGCAGCTTCCCTTAATGATATCTTC 58.763 40.000 3.98 0.00 0.00 2.87
3323 4495 3.950395 GTCAAGCAGCTTCCCTTAATGAT 59.050 43.478 4.07 0.00 0.00 2.45
3325 4497 3.084039 TGTCAAGCAGCTTCCCTTAATG 58.916 45.455 4.07 0.00 0.00 1.90
3327 4499 2.949177 TGTCAAGCAGCTTCCCTTAA 57.051 45.000 4.07 0.00 0.00 1.85
3328 4500 2.949177 TTGTCAAGCAGCTTCCCTTA 57.051 45.000 4.07 0.00 0.00 2.69
3329 4501 2.071778 TTTGTCAAGCAGCTTCCCTT 57.928 45.000 4.07 0.00 0.00 3.95
3330 4502 1.891150 CATTTGTCAAGCAGCTTCCCT 59.109 47.619 4.07 0.00 0.00 4.20
3331 4503 1.067354 CCATTTGTCAAGCAGCTTCCC 60.067 52.381 4.07 0.00 0.00 3.97
3333 4505 1.706443 GCCATTTGTCAAGCAGCTTC 58.294 50.000 4.07 0.00 0.00 3.86
3335 4507 1.582968 CGCCATTTGTCAAGCAGCT 59.417 52.632 0.00 0.00 0.00 4.24
3345 4644 0.029035 GATGAGCAGAGCGCCATTTG 59.971 55.000 2.29 0.00 44.04 2.32
3350 4649 2.280052 GGAGATGAGCAGAGCGCC 60.280 66.667 2.29 0.00 44.04 6.53
3376 4675 5.500234 CATCCATAGGGTATGTATGGTTGG 58.500 45.833 8.61 0.00 45.10 3.77
3391 4690 3.062763 CCGAGTAAGCAAGCATCCATAG 58.937 50.000 0.00 0.00 0.00 2.23
3392 4691 2.698274 TCCGAGTAAGCAAGCATCCATA 59.302 45.455 0.00 0.00 0.00 2.74
3409 4708 1.269723 CAGCAGATAATACGGCTCCGA 59.730 52.381 15.95 0.00 39.04 4.55
3410 4709 1.670087 CCAGCAGATAATACGGCTCCG 60.670 57.143 6.79 6.79 39.04 4.63
3415 4714 3.753294 ACCTTCCAGCAGATAATACGG 57.247 47.619 0.00 0.00 0.00 4.02
3450 4749 9.703892 CCTTTGGTAATCAAATAAATCAACACA 57.296 29.630 0.00 0.00 43.57 3.72
3453 4752 9.921637 TGACCTTTGGTAATCAAATAAATCAAC 57.078 29.630 0.00 0.00 43.57 3.18
3490 4789 1.247567 AACAGTTGGGGAAATCGCAG 58.752 50.000 0.00 0.00 39.53 5.18
3491 4790 1.698506 AAACAGTTGGGGAAATCGCA 58.301 45.000 0.00 0.00 36.48 5.10
3494 4793 5.912892 TGAAGAAAAACAGTTGGGGAAATC 58.087 37.500 0.00 0.00 0.00 2.17
3499 4798 9.942850 AAATAATATGAAGAAAAACAGTTGGGG 57.057 29.630 0.00 0.00 0.00 4.96


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.