Multiple sequence alignment - TraesCS2A01G004600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G004600 chr2A 100.000 4818 0 0 1 4818 2467243 2462426 0.000000e+00 8898.0
1 TraesCS2A01G004600 chr2A 77.104 297 48 15 3106 3395 767329064 767329347 2.320000e-33 154.0
2 TraesCS2A01G004600 chr2A 86.957 92 8 2 4726 4817 631535284 631535371 3.070000e-17 100.0
3 TraesCS2A01G004600 chr2D 84.699 2379 170 86 2333 4623 2494240 2496512 0.000000e+00 2198.0
4 TraesCS2A01G004600 chr2D 83.606 2324 196 89 124 2335 2491820 2494070 0.000000e+00 2010.0
5 TraesCS2A01G004600 chr2D 84.921 504 37 13 445 924 73456011 73455523 1.570000e-129 473.0
6 TraesCS2A01G004600 chr2D 78.058 278 39 16 3102 3371 642220847 642220584 6.460000e-34 156.0
7 TraesCS2A01G004600 chr2D 86.087 115 12 2 4703 4817 5713325 5713435 2.360000e-23 121.0
8 TraesCS2A01G004600 chrUn 89.152 1309 64 26 210 1485 15888781 15887518 0.000000e+00 1559.0
9 TraesCS2A01G004600 chrUn 88.988 1008 68 24 2883 3868 15886037 15885051 0.000000e+00 1206.0
10 TraesCS2A01G004600 chrUn 81.528 1126 67 58 1536 2559 15887426 15886340 0.000000e+00 797.0
11 TraesCS2A01G004600 chrUn 85.246 427 24 18 1646 2033 375146510 375146936 2.090000e-108 403.0
12 TraesCS2A01G004600 chrUn 85.246 427 24 18 1646 2033 375154965 375154539 2.090000e-108 403.0
13 TraesCS2A01G004600 chrUn 89.848 197 10 3 1133 1319 468301094 468301290 1.340000e-60 244.0
14 TraesCS2A01G004600 chrUn 89.759 166 7 3 1164 1319 467212618 467212453 2.270000e-48 204.0
15 TraesCS2A01G004600 chrUn 96.721 61 1 1 2333 2392 235314661 235314601 3.070000e-17 100.0
16 TraesCS2A01G004600 chrUn 96.721 61 1 1 2333 2392 310828159 310828099 3.070000e-17 100.0
17 TraesCS2A01G004600 chrUn 96.721 61 1 1 2333 2392 358798754 358798694 3.070000e-17 100.0
18 TraesCS2A01G004600 chrUn 96.721 61 1 1 2333 2392 371376314 371376254 3.070000e-17 100.0
19 TraesCS2A01G004600 chrUn 96.721 61 1 1 2333 2392 381238544 381238604 3.070000e-17 100.0
20 TraesCS2A01G004600 chrUn 96.721 61 1 1 2333 2392 401395315 401395375 3.070000e-17 100.0
21 TraesCS2A01G004600 chrUn 96.721 61 1 1 2333 2392 422626040 422625980 3.070000e-17 100.0
22 TraesCS2A01G004600 chr7D 82.491 811 50 41 1646 2392 539571082 539571864 1.140000e-175 627.0
23 TraesCS2A01G004600 chr7D 83.186 339 22 17 1646 1949 474909838 474909500 1.320000e-70 278.0
24 TraesCS2A01G004600 chr7D 88.557 201 9 5 1809 1995 36389719 36389519 1.040000e-56 231.0
25 TraesCS2A01G004600 chr7D 88.557 201 9 5 1809 1995 144484396 144484196 1.040000e-56 231.0
26 TraesCS2A01G004600 chr7D 89.431 123 6 4 1809 1924 103976502 103976380 1.080000e-31 148.0
27 TraesCS2A01G004600 chr5D 81.975 810 55 38 1646 2392 558691014 558691795 1.920000e-168 603.0
28 TraesCS2A01G004600 chr5D 82.504 663 48 29 1775 2392 430256306 430255667 1.990000e-143 520.0
29 TraesCS2A01G004600 chr1B 81.941 814 50 42 1646 2392 633592215 633591432 2.480000e-167 599.0
30 TraesCS2A01G004600 chr1B 84.772 197 13 8 1514 1699 75951809 75951619 1.070000e-41 182.0
31 TraesCS2A01G004600 chr1B 96.774 62 1 1 2332 2392 447533646 447533707 8.530000e-18 102.0
32 TraesCS2A01G004600 chr1D 81.773 812 56 39 1646 2392 419918538 419917754 3.210000e-166 595.0
33 TraesCS2A01G004600 chr1D 84.112 428 28 21 1646 2033 12647935 12648362 1.270000e-100 377.0
34 TraesCS2A01G004600 chr2B 81.728 810 57 41 1646 2392 97482025 97482806 4.150000e-165 592.0
35 TraesCS2A01G004600 chr2B 89.848 197 10 3 1133 1319 360732134 360732330 1.340000e-60 244.0
36 TraesCS2A01G004600 chr2B 88.725 204 8 6 1820 2008 132668851 132668648 8.060000e-58 235.0
37 TraesCS2A01G004600 chr2B 84.492 187 12 8 1514 1689 360732856 360733036 8.290000e-38 169.0
38 TraesCS2A01G004600 chr2B 77.703 296 48 13 3106 3395 799533681 799533964 1.070000e-36 165.0
39 TraesCS2A01G004600 chr2B 88.660 97 5 5 1829 1919 501956464 501956368 3.940000e-21 113.0
40 TraesCS2A01G004600 chr2B 89.189 74 8 0 4677 4750 402718901 402718974 5.130000e-15 93.5
41 TraesCS2A01G004600 chr4D 81.289 807 59 45 1646 2392 346977967 346978741 1.950000e-158 569.0
42 TraesCS2A01G004600 chr4D 83.766 308 22 15 1646 1925 4603690 4603997 2.860000e-67 267.0
43 TraesCS2A01G004600 chr6B 84.117 617 44 23 1647 2220 31654681 31654076 9.120000e-152 547.0
44 TraesCS2A01G004600 chr6B 87.395 119 11 2 4699 4817 9283371 9283257 3.030000e-27 134.0
45 TraesCS2A01G004600 chr6B 87.963 108 13 0 4676 4783 116045252 116045359 1.410000e-25 128.0
46 TraesCS2A01G004600 chr6B 85.833 120 16 1 4674 4792 304537108 304537227 5.060000e-25 126.0
47 TraesCS2A01G004600 chr3B 80.031 651 85 21 564 1208 558503484 558504095 1.590000e-119 440.0
48 TraesCS2A01G004600 chr3B 84.615 429 23 18 1646 2033 750433145 750432719 2.100000e-103 387.0
49 TraesCS2A01G004600 chr3B 89.848 197 10 3 1133 1319 35987231 35987035 1.340000e-60 244.0
50 TraesCS2A01G004600 chr3B 84.242 165 11 9 1775 1924 35986293 35986129 3.890000e-31 147.0
51 TraesCS2A01G004600 chr3B 83.766 154 6 2 1319 1472 558504219 558504353 1.410000e-25 128.0
52 TraesCS2A01G004600 chr3A 86.945 383 21 11 1775 2134 48416053 48415677 2.090000e-108 403.0
53 TraesCS2A01G004600 chr3A 85.279 197 12 8 1514 1699 717054189 717053999 2.290000e-43 187.0
54 TraesCS2A01G004600 chr5B 86.684 383 22 11 1775 2134 708638531 708638155 9.720000e-107 398.0
55 TraesCS2A01G004600 chr5B 85.608 403 24 14 1760 2134 179589216 179588820 4.520000e-105 392.0
56 TraesCS2A01G004600 chr5B 89.848 197 10 3 1133 1319 708639469 708639273 1.340000e-60 244.0
57 TraesCS2A01G004600 chr5B 89.340 197 11 3 1133 1319 333142487 333142291 6.230000e-59 239.0
58 TraesCS2A01G004600 chr5B 85.279 197 12 8 1514 1699 179589412 179589222 2.290000e-43 187.0
59 TraesCS2A01G004600 chr5B 85.279 197 12 8 1514 1699 708638747 708638557 2.290000e-43 187.0
60 TraesCS2A01G004600 chr5B 85.027 187 11 8 1514 1689 333141765 333141585 1.780000e-39 174.0
61 TraesCS2A01G004600 chr5A 89.848 197 10 3 1133 1319 555960517 555960321 1.340000e-60 244.0
62 TraesCS2A01G004600 chr4B 88.325 197 13 3 1133 1319 401973211 401973015 1.350000e-55 228.0
63 TraesCS2A01G004600 chr4B 85.027 187 11 8 1514 1689 401972489 401972309 1.780000e-39 174.0
64 TraesCS2A01G004600 chr4B 86.066 122 13 2 4696 4817 428876901 428876784 1.410000e-25 128.0
65 TraesCS2A01G004600 chr7B 84.772 197 13 8 1514 1699 599574762 599574572 1.070000e-41 182.0
66 TraesCS2A01G004600 chr7B 84.242 165 11 6 1775 1924 599574546 599574382 3.890000e-31 147.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G004600 chr2A 2462426 2467243 4817 True 8898.000000 8898 100.000000 1 4818 1 chr2A.!!$R1 4817
1 TraesCS2A01G004600 chr2D 2491820 2496512 4692 False 2104.000000 2198 84.152500 124 4623 2 chr2D.!!$F2 4499
2 TraesCS2A01G004600 chrUn 15885051 15888781 3730 True 1187.333333 1559 86.556000 210 3868 3 chrUn.!!$R8 3658
3 TraesCS2A01G004600 chr7D 539571082 539571864 782 False 627.000000 627 82.491000 1646 2392 1 chr7D.!!$F1 746
4 TraesCS2A01G004600 chr5D 558691014 558691795 781 False 603.000000 603 81.975000 1646 2392 1 chr5D.!!$F1 746
5 TraesCS2A01G004600 chr5D 430255667 430256306 639 True 520.000000 520 82.504000 1775 2392 1 chr5D.!!$R1 617
6 TraesCS2A01G004600 chr1B 633591432 633592215 783 True 599.000000 599 81.941000 1646 2392 1 chr1B.!!$R2 746
7 TraesCS2A01G004600 chr1D 419917754 419918538 784 True 595.000000 595 81.773000 1646 2392 1 chr1D.!!$R1 746
8 TraesCS2A01G004600 chr2B 97482025 97482806 781 False 592.000000 592 81.728000 1646 2392 1 chr2B.!!$F1 746
9 TraesCS2A01G004600 chr2B 360732134 360733036 902 False 206.500000 244 87.170000 1133 1689 2 chr2B.!!$F4 556
10 TraesCS2A01G004600 chr4D 346977967 346978741 774 False 569.000000 569 81.289000 1646 2392 1 chr4D.!!$F2 746
11 TraesCS2A01G004600 chr6B 31654076 31654681 605 True 547.000000 547 84.117000 1647 2220 1 chr6B.!!$R2 573
12 TraesCS2A01G004600 chr3B 558503484 558504353 869 False 284.000000 440 81.898500 564 1472 2 chr3B.!!$F1 908
13 TraesCS2A01G004600 chr5B 179588820 179589412 592 True 289.500000 392 85.443500 1514 2134 2 chr5B.!!$R1 620
14 TraesCS2A01G004600 chr5B 708638155 708639469 1314 True 276.333333 398 87.270333 1133 2134 3 chr5B.!!$R3 1001
15 TraesCS2A01G004600 chr5B 333141585 333142487 902 True 206.500000 239 87.183500 1133 1689 2 chr5B.!!$R2 556
16 TraesCS2A01G004600 chr4B 401972309 401973211 902 True 201.000000 228 86.676000 1133 1689 2 chr4B.!!$R2 556

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
136 137 0.179148 CTATGCGGCGCCATATCGTA 60.179 55.0 30.82 12.04 0.00 3.43 F
388 413 0.396974 CCCAGAGAGAGTGAGGGAGG 60.397 65.0 0.00 0.00 42.25 4.30 F
2263 3096 0.613260 TACTCCACATGACTGCCCAC 59.387 55.0 0.00 0.00 0.00 4.61 F
2979 4094 0.033228 CTGACCGCCCTCAGATCATC 59.967 60.0 0.00 0.00 40.28 2.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1098 1153 0.672711 ACGACGACGAGGAGTGATGA 60.673 55.0 15.32 0.0 42.66 2.92 R
2274 3107 0.808453 CGGCGGTATGGTGGTGTAAG 60.808 60.0 0.00 0.0 0.00 2.34 R
3809 4947 0.933097 GCATACGCATGTCACTGAGG 59.067 55.0 0.00 0.0 38.36 3.86 R
4730 5921 0.031994 AAACTCGGGCAAACATGCAC 59.968 50.0 2.97 0.0 36.33 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 7.539712 ACTACTTTCATGTGGTATCGATTTG 57.460 36.000 1.71 0.00 29.89 2.32
46 47 5.818136 ACTTTCATGTGGTATCGATTTGG 57.182 39.130 1.71 0.00 0.00 3.28
47 48 5.253330 ACTTTCATGTGGTATCGATTTGGT 58.747 37.500 1.71 0.00 0.00 3.67
48 49 5.710099 ACTTTCATGTGGTATCGATTTGGTT 59.290 36.000 1.71 0.00 0.00 3.67
49 50 5.559427 TTCATGTGGTATCGATTTGGTTG 57.441 39.130 1.71 0.00 0.00 3.77
50 51 4.584874 TCATGTGGTATCGATTTGGTTGT 58.415 39.130 1.71 0.00 0.00 3.32
51 52 4.394610 TCATGTGGTATCGATTTGGTTGTG 59.605 41.667 1.71 0.00 0.00 3.33
52 53 3.078097 TGTGGTATCGATTTGGTTGTGG 58.922 45.455 1.71 0.00 0.00 4.17
53 54 2.422127 GTGGTATCGATTTGGTTGTGGG 59.578 50.000 1.71 0.00 0.00 4.61
54 55 2.040545 TGGTATCGATTTGGTTGTGGGT 59.959 45.455 1.71 0.00 0.00 4.51
55 56 3.263681 TGGTATCGATTTGGTTGTGGGTA 59.736 43.478 1.71 0.00 0.00 3.69
56 57 3.875134 GGTATCGATTTGGTTGTGGGTAG 59.125 47.826 1.71 0.00 0.00 3.18
57 58 3.992943 ATCGATTTGGTTGTGGGTAGA 57.007 42.857 0.00 0.00 0.00 2.59
58 59 3.328382 TCGATTTGGTTGTGGGTAGAG 57.672 47.619 0.00 0.00 0.00 2.43
59 60 2.901192 TCGATTTGGTTGTGGGTAGAGA 59.099 45.455 0.00 0.00 0.00 3.10
60 61 3.517901 TCGATTTGGTTGTGGGTAGAGAT 59.482 43.478 0.00 0.00 0.00 2.75
61 62 4.712829 TCGATTTGGTTGTGGGTAGAGATA 59.287 41.667 0.00 0.00 0.00 1.98
62 63 5.050490 CGATTTGGTTGTGGGTAGAGATAG 58.950 45.833 0.00 0.00 0.00 2.08
63 64 5.395324 CGATTTGGTTGTGGGTAGAGATAGT 60.395 44.000 0.00 0.00 0.00 2.12
64 65 5.836024 TTTGGTTGTGGGTAGAGATAGTT 57.164 39.130 0.00 0.00 0.00 2.24
65 66 5.836024 TTGGTTGTGGGTAGAGATAGTTT 57.164 39.130 0.00 0.00 0.00 2.66
66 67 5.836024 TGGTTGTGGGTAGAGATAGTTTT 57.164 39.130 0.00 0.00 0.00 2.43
67 68 5.801380 TGGTTGTGGGTAGAGATAGTTTTC 58.199 41.667 0.00 0.00 0.00 2.29
68 69 5.546499 TGGTTGTGGGTAGAGATAGTTTTCT 59.454 40.000 0.00 0.00 0.00 2.52
69 70 6.107343 GGTTGTGGGTAGAGATAGTTTTCTC 58.893 44.000 0.00 0.00 42.08 2.87
122 123 7.713764 AACTTTTGTGAATGAAAACCTATGC 57.286 32.000 0.00 0.00 0.00 3.14
136 137 0.179148 CTATGCGGCGCCATATCGTA 60.179 55.000 30.82 12.04 0.00 3.43
154 155 3.106672 CGTATGACGGAAGAAGTAGTGC 58.893 50.000 0.00 0.00 38.08 4.40
157 158 6.455128 CGTATGACGGAAGAAGTAGTGCTTC 61.455 48.000 12.62 12.62 44.46 3.86
184 185 0.666577 GTTCGGAGGGTGTGAACTCG 60.667 60.000 0.00 0.00 39.07 4.18
189 190 1.336609 GGAGGGTGTGAACTCGTACAC 60.337 57.143 0.00 0.00 44.84 2.90
190 191 1.338973 GAGGGTGTGAACTCGTACACA 59.661 52.381 9.38 0.00 46.79 3.72
191 192 1.968493 AGGGTGTGAACTCGTACACAT 59.032 47.619 9.38 0.00 46.79 3.21
196 197 5.035443 GGTGTGAACTCGTACACATATCTC 58.965 45.833 9.38 0.00 46.79 2.75
201 202 6.140895 GTGAACTCGTACACATATCTCAATCG 59.859 42.308 0.00 0.00 37.05 3.34
203 204 6.561737 ACTCGTACACATATCTCAATCGAT 57.438 37.500 0.00 0.00 0.00 3.59
205 206 6.017026 ACTCGTACACATATCTCAATCGATGT 60.017 38.462 0.00 0.00 32.78 3.06
273 274 1.097547 TAATCCTCCCGACGACGACC 61.098 60.000 9.28 0.00 42.66 4.79
276 277 3.862402 CTCCCGACGACGACCGAG 61.862 72.222 9.28 6.72 42.66 4.63
298 320 7.203218 CGAGGATTTATTGAAAAGGGGATTTC 58.797 38.462 0.00 0.00 39.28 2.17
309 331 7.122048 TGAAAAGGGGATTTCAAAACCATTTT 58.878 30.769 15.38 15.38 45.96 1.82
354 376 4.830600 GTCAAGTCATTTCCTGGGGTTTTA 59.169 41.667 0.00 0.00 0.00 1.52
388 413 0.396974 CCCAGAGAGAGTGAGGGAGG 60.397 65.000 0.00 0.00 42.25 4.30
389 414 0.396974 CCAGAGAGAGTGAGGGAGGG 60.397 65.000 0.00 0.00 0.00 4.30
390 415 0.628522 CAGAGAGAGTGAGGGAGGGA 59.371 60.000 0.00 0.00 0.00 4.20
391 416 0.926293 AGAGAGAGTGAGGGAGGGAG 59.074 60.000 0.00 0.00 0.00 4.30
418 443 3.577848 AGCTGGAGTAGAGCCTTCATATG 59.422 47.826 0.00 0.00 37.12 1.78
424 449 2.338577 AGAGCCTTCATATGCACACC 57.661 50.000 0.00 0.00 0.00 4.16
425 450 1.561076 AGAGCCTTCATATGCACACCA 59.439 47.619 0.00 0.00 0.00 4.17
426 451 1.672881 GAGCCTTCATATGCACACCAC 59.327 52.381 0.00 0.00 0.00 4.16
427 452 1.004628 AGCCTTCATATGCACACCACA 59.995 47.619 0.00 0.00 0.00 4.17
457 482 3.626596 TCAGCCCTCCCCTCCCTT 61.627 66.667 0.00 0.00 0.00 3.95
459 484 3.296737 AGCCCTCCCCTCCCTTCT 61.297 66.667 0.00 0.00 0.00 2.85
460 485 2.286502 GCCCTCCCCTCCCTTCTT 60.287 66.667 0.00 0.00 0.00 2.52
461 486 1.931180 GCCCTCCCCTCCCTTCTTT 60.931 63.158 0.00 0.00 0.00 2.52
462 487 0.623617 GCCCTCCCCTCCCTTCTTTA 60.624 60.000 0.00 0.00 0.00 1.85
463 488 1.981259 CCCTCCCCTCCCTTCTTTAA 58.019 55.000 0.00 0.00 0.00 1.52
464 489 2.284770 CCCTCCCCTCCCTTCTTTAAA 58.715 52.381 0.00 0.00 0.00 1.52
466 491 3.117474 CCCTCCCCTCCCTTCTTTAAATC 60.117 52.174 0.00 0.00 0.00 2.17
468 493 2.508300 TCCCCTCCCTTCTTTAAATCGG 59.492 50.000 0.00 0.00 0.00 4.18
469 494 2.508300 CCCCTCCCTTCTTTAAATCGGA 59.492 50.000 0.00 0.00 0.00 4.55
470 495 3.433740 CCCCTCCCTTCTTTAAATCGGAG 60.434 52.174 10.74 10.74 37.28 4.63
496 525 1.878522 GCCATACGGACACAGAGCG 60.879 63.158 0.00 0.00 0.00 5.03
497 526 1.878522 CCATACGGACACAGAGCGC 60.879 63.158 0.00 0.00 0.00 5.92
498 527 2.102357 ATACGGACACAGAGCGCG 59.898 61.111 0.00 0.00 0.00 6.86
499 528 4.771356 TACGGACACAGAGCGCGC 62.771 66.667 26.66 26.66 0.00 6.86
511 540 2.278336 GCGCGCACACGGATACTA 60.278 61.111 29.10 0.00 40.57 1.82
516 545 1.209275 CGCACACGGATACTAGCAGC 61.209 60.000 0.00 0.00 34.97 5.25
530 559 2.181521 GCAGCAGCTCAGCTCCATC 61.182 63.158 0.00 0.00 44.54 3.51
653 694 1.024271 ACAGCAAGCGCAAGAAGAAA 58.976 45.000 11.47 0.00 42.27 2.52
830 877 1.004560 CAGTGGCTCGAAGAAGGCA 60.005 57.895 0.00 0.00 37.73 4.75
990 1037 2.138831 GGGATACTGGGGGACGTCC 61.139 68.421 27.04 27.04 0.00 4.79
1152 1211 3.760035 CACCCGTCCTCACTCCGG 61.760 72.222 0.00 0.00 41.37 5.14
1252 1331 4.103153 CCCCTCTCATTAGCCATCAACTAA 59.897 45.833 0.00 0.00 34.29 2.24
1282 1361 6.548321 TGGATGTTAACCATGGTTAGTCTTT 58.452 36.000 30.87 20.14 40.98 2.52
1302 1381 9.686683 AGTCTTTGCCATTAGTACTAATCATTT 57.313 29.630 22.60 2.73 33.79 2.32
1445 2033 1.399440 GGTAAATTCTCGAAACCCCGC 59.601 52.381 0.00 0.00 0.00 6.13
1446 2034 1.399440 GTAAATTCTCGAAACCCCGCC 59.601 52.381 0.00 0.00 0.00 6.13
1485 2073 2.420642 GATCGATGCACACAGCCATAT 58.579 47.619 0.54 0.00 44.83 1.78
1486 2074 3.588955 GATCGATGCACACAGCCATATA 58.411 45.455 0.54 0.00 44.83 0.86
1487 2075 3.683365 TCGATGCACACAGCCATATAT 57.317 42.857 0.00 0.00 44.83 0.86
1488 2076 4.799564 TCGATGCACACAGCCATATATA 57.200 40.909 0.00 0.00 44.83 0.86
1510 2098 3.981303 CCGCGAAAATCGGCATTG 58.019 55.556 8.23 0.00 40.84 2.82
1570 2215 7.383029 ACACTATGCATGTGTTGAAGATTTTTG 59.617 33.333 21.62 3.75 45.11 2.44
1632 2292 5.091552 ACTAACCAGAACCATTAGTCAGGA 58.908 41.667 0.00 0.00 34.77 3.86
1749 2488 7.613022 GGGCTAATCATGATTAAATGATGGAGA 59.387 37.037 24.61 4.64 44.67 3.71
1766 2511 2.438021 GGAGAAGGTATACATGGCACCA 59.562 50.000 13.23 0.00 34.62 4.17
1769 2514 4.464008 AGAAGGTATACATGGCACCAATG 58.536 43.478 13.23 0.00 34.62 2.82
1818 2574 4.707448 AGATTATACGCCCTGATCTAGTGG 59.293 45.833 0.00 0.00 0.00 4.00
1836 2595 4.918588 AGTGGTTTAGTGGTTGGATTAGG 58.081 43.478 0.00 0.00 0.00 2.69
1851 2610 9.293404 GGTTGGATTAGGTTAGTAATTTATCCC 57.707 37.037 10.44 0.00 31.44 3.85
1868 2643 3.673484 CCACACCCTTGCTTGCCG 61.673 66.667 0.00 0.00 0.00 5.69
1945 2731 3.523157 TCATCAAAGCTAACCATCTCCCA 59.477 43.478 0.00 0.00 0.00 4.37
2033 2828 3.590466 AATCCACTGCCACTGCCCC 62.590 63.158 0.00 0.00 36.33 5.80
2045 2840 1.145738 CACTGCCCCTGCCCTAATTAT 59.854 52.381 0.00 0.00 36.33 1.28
2047 2842 3.060611 ACTGCCCCTGCCCTAATTATAA 58.939 45.455 0.00 0.00 36.33 0.98
2051 2846 6.010739 ACTGCCCCTGCCCTAATTATAATATT 60.011 38.462 0.00 0.00 36.33 1.28
2054 2853 6.039382 GCCCCTGCCCTAATTATAATATTTCG 59.961 42.308 0.00 0.00 0.00 3.46
2127 2930 0.673437 TGCTTGCACTTGGTAAAGGC 59.327 50.000 0.00 0.00 37.76 4.35
2204 3023 1.072678 GGCCGGGGTATCTTTAGGC 59.927 63.158 2.18 0.00 43.47 3.93
2215 3034 2.751166 TCTTTAGGCAGACAGTGAGC 57.249 50.000 0.00 0.00 0.00 4.26
2263 3096 0.613260 TACTCCACATGACTGCCCAC 59.387 55.000 0.00 0.00 0.00 4.61
2271 3104 4.096382 CCACATGACTGCCCACTATTAAAC 59.904 45.833 0.00 0.00 0.00 2.01
2274 3107 3.681593 TGACTGCCCACTATTAAACCAC 58.318 45.455 0.00 0.00 0.00 4.16
2289 3127 3.428413 AACCACTTACACCACCATACC 57.572 47.619 0.00 0.00 0.00 2.73
2290 3128 1.276989 ACCACTTACACCACCATACCG 59.723 52.381 0.00 0.00 0.00 4.02
2321 3159 9.632807 CTAGTCGATTAATTAAGCAGCTAATCT 57.367 33.333 13.48 3.74 31.44 2.40
2325 3163 7.926018 TCGATTAATTAAGCAGCTAATCTCACA 59.074 33.333 13.48 0.00 31.44 3.58
2419 3457 2.672381 GCGGTTGGTAGCACGTTAATTA 59.328 45.455 0.00 0.00 0.00 1.40
2420 3458 3.124976 GCGGTTGGTAGCACGTTAATTAA 59.875 43.478 0.00 0.00 0.00 1.40
2423 3461 5.624292 GGTTGGTAGCACGTTAATTAAGTG 58.376 41.667 16.84 16.84 38.77 3.16
2424 3462 5.391203 GGTTGGTAGCACGTTAATTAAGTGG 60.391 44.000 20.01 8.65 36.48 4.00
2426 3464 4.020396 TGGTAGCACGTTAATTAAGTGGGA 60.020 41.667 20.01 0.00 36.48 4.37
2437 3508 1.753930 TAAGTGGGACTGCATGCATG 58.246 50.000 22.97 22.70 0.00 4.06
2451 3522 4.096732 CATGCATGCATATCCATGTCTG 57.903 45.455 31.73 14.07 43.46 3.51
2452 3523 1.883926 TGCATGCATATCCATGTCTGC 59.116 47.619 18.46 0.00 43.46 4.26
2453 3524 2.160205 GCATGCATATCCATGTCTGCT 58.840 47.619 14.21 0.00 43.46 4.24
2454 3525 2.557056 GCATGCATATCCATGTCTGCTT 59.443 45.455 14.21 0.00 43.46 3.91
2455 3526 3.611766 GCATGCATATCCATGTCTGCTTG 60.612 47.826 14.21 13.11 43.46 4.01
2456 3527 3.286329 TGCATATCCATGTCTGCTTGT 57.714 42.857 0.00 0.00 35.66 3.16
2457 3528 3.623703 TGCATATCCATGTCTGCTTGTT 58.376 40.909 0.00 0.00 35.66 2.83
2458 3529 3.379057 TGCATATCCATGTCTGCTTGTTG 59.621 43.478 0.00 0.00 35.66 3.33
2459 3530 3.379372 GCATATCCATGTCTGCTTGTTGT 59.621 43.478 0.00 0.00 34.40 3.32
2460 3531 4.576053 GCATATCCATGTCTGCTTGTTGTA 59.424 41.667 0.00 0.00 34.40 2.41
2461 3532 5.240183 GCATATCCATGTCTGCTTGTTGTAT 59.760 40.000 0.00 0.00 34.40 2.29
2474 3545 9.967346 TCTGCTTGTTGTATATCTACACTTATC 57.033 33.333 0.00 0.00 37.58 1.75
2502 3573 6.203723 AGAGAGAGAAAACAAAATGAAGGACG 59.796 38.462 0.00 0.00 0.00 4.79
2516 3587 3.997021 TGAAGGACGAGAAAAGATGAAGC 59.003 43.478 0.00 0.00 0.00 3.86
2525 3596 4.243270 AGAAAAGATGAAGCTTTGCATGC 58.757 39.130 11.82 11.82 38.08 4.06
2530 3601 3.697542 AGATGAAGCTTTGCATGCACATA 59.302 39.130 22.58 2.37 33.05 2.29
2559 3630 3.001634 GTGAGACATGAACACACACACAG 59.998 47.826 0.00 0.00 35.06 3.66
2560 3631 3.118811 TGAGACATGAACACACACACAGA 60.119 43.478 0.00 0.00 0.00 3.41
2563 3634 2.677836 ACATGAACACACACACAGACAC 59.322 45.455 0.00 0.00 0.00 3.67
2564 3635 2.464157 TGAACACACACACAGACACA 57.536 45.000 0.00 0.00 0.00 3.72
2565 3636 2.073056 TGAACACACACACAGACACAC 58.927 47.619 0.00 0.00 0.00 3.82
2566 3637 2.073056 GAACACACACACAGACACACA 58.927 47.619 0.00 0.00 0.00 3.72
2567 3638 1.725641 ACACACACACAGACACACAG 58.274 50.000 0.00 0.00 0.00 3.66
2568 3639 1.275010 ACACACACACAGACACACAGA 59.725 47.619 0.00 0.00 0.00 3.41
2576 3647 1.202302 ACAGACACACAGACACACTCG 60.202 52.381 0.00 0.00 0.00 4.18
2606 3677 3.470645 TCTGCATGAGACCATCATCTG 57.529 47.619 0.00 0.00 46.01 2.90
2607 3678 1.874231 CTGCATGAGACCATCATCTGC 59.126 52.381 0.00 0.00 46.01 4.26
2608 3679 1.489230 TGCATGAGACCATCATCTGCT 59.511 47.619 0.00 0.00 46.01 4.24
2610 3681 3.326880 TGCATGAGACCATCATCTGCTAT 59.673 43.478 0.00 0.00 46.01 2.97
2611 3682 4.529377 TGCATGAGACCATCATCTGCTATA 59.471 41.667 0.00 0.00 46.01 1.31
2612 3683 5.012354 TGCATGAGACCATCATCTGCTATAA 59.988 40.000 0.00 0.00 46.01 0.98
2613 3684 5.350914 GCATGAGACCATCATCTGCTATAAC 59.649 44.000 0.00 0.00 46.01 1.89
2614 3685 6.699366 CATGAGACCATCATCTGCTATAACT 58.301 40.000 0.00 0.00 46.01 2.24
2615 3686 6.338214 TGAGACCATCATCTGCTATAACTC 57.662 41.667 0.00 0.00 31.12 3.01
2616 3687 5.048434 TGAGACCATCATCTGCTATAACTCG 60.048 44.000 0.00 0.00 31.12 4.18
2617 3688 4.830046 AGACCATCATCTGCTATAACTCGT 59.170 41.667 0.00 0.00 0.00 4.18
2618 3689 5.303078 AGACCATCATCTGCTATAACTCGTT 59.697 40.000 0.00 0.00 0.00 3.85
2619 3690 5.292765 ACCATCATCTGCTATAACTCGTTG 58.707 41.667 0.00 0.00 0.00 4.10
2620 3691 4.151335 CCATCATCTGCTATAACTCGTTGC 59.849 45.833 0.00 0.00 0.00 4.17
2621 3692 4.385358 TCATCTGCTATAACTCGTTGCA 57.615 40.909 0.00 0.00 0.00 4.08
2622 3693 4.948847 TCATCTGCTATAACTCGTTGCAT 58.051 39.130 0.00 0.00 33.02 3.96
2660 3731 0.817013 AACATGGTTAATGCCCGCTG 59.183 50.000 0.00 0.00 40.22 5.18
2725 3801 3.420799 CGTTGAACGTTACACATGTACCG 60.421 47.826 9.94 7.35 41.29 4.02
2744 3820 2.770232 CCGGTGTACCTTCTCCCTTAAT 59.230 50.000 0.00 0.00 0.00 1.40
2750 3826 6.107343 GTGTACCTTCTCCCTTAATGTCTTC 58.893 44.000 0.00 0.00 0.00 2.87
2765 3841 9.254133 CTTAATGTCTTCATGTCCATGTACTAG 57.746 37.037 7.13 0.00 39.72 2.57
2778 3854 4.036027 CCATGTACTAGTGGTAGGTGTACG 59.964 50.000 5.39 0.00 37.04 3.67
2779 3855 4.286297 TGTACTAGTGGTAGGTGTACGT 57.714 45.455 5.39 0.00 37.04 3.57
2780 3856 5.414789 TGTACTAGTGGTAGGTGTACGTA 57.585 43.478 5.39 0.00 37.04 3.57
2781 3857 5.175859 TGTACTAGTGGTAGGTGTACGTAC 58.824 45.833 18.90 18.90 37.04 3.67
2782 3858 4.559862 ACTAGTGGTAGGTGTACGTACT 57.440 45.455 25.12 9.07 37.37 2.73
2783 3859 4.256920 ACTAGTGGTAGGTGTACGTACTG 58.743 47.826 25.12 3.03 37.37 2.74
2784 3860 2.440409 AGTGGTAGGTGTACGTACTGG 58.560 52.381 25.12 0.00 37.37 4.00
2785 3861 2.040278 AGTGGTAGGTGTACGTACTGGA 59.960 50.000 25.12 3.65 37.37 3.86
2786 3862 2.162408 GTGGTAGGTGTACGTACTGGAC 59.838 54.545 25.12 15.35 37.37 4.02
2787 3863 2.040278 TGGTAGGTGTACGTACTGGACT 59.960 50.000 25.12 18.36 37.37 3.85
2788 3864 3.263170 TGGTAGGTGTACGTACTGGACTA 59.737 47.826 25.12 17.50 37.37 2.59
2789 3865 3.623510 GGTAGGTGTACGTACTGGACTAC 59.376 52.174 25.12 24.84 37.37 2.73
2790 3866 3.710209 AGGTGTACGTACTGGACTACT 57.290 47.619 25.12 10.39 0.00 2.57
2791 3867 3.341823 AGGTGTACGTACTGGACTACTG 58.658 50.000 25.12 0.00 0.00 2.74
2792 3868 2.421424 GGTGTACGTACTGGACTACTGG 59.579 54.545 25.12 0.00 0.00 4.00
2793 3869 3.077359 GTGTACGTACTGGACTACTGGT 58.923 50.000 25.12 0.00 0.00 4.00
2815 3891 6.603997 TGGTGTACATACTTTTCACCTGTTTT 59.396 34.615 0.00 0.00 45.82 2.43
2834 3910 4.301072 TTTAGGTTGGAGGACTGATTGG 57.699 45.455 0.00 0.00 0.00 3.16
2881 3996 5.412904 GCCTTAATCAATACAGATACAGCCC 59.587 44.000 0.00 0.00 0.00 5.19
2898 4013 2.616842 AGCCCGATTAATTTAGTTGCCG 59.383 45.455 0.00 0.00 0.00 5.69
2899 4014 2.614983 GCCCGATTAATTTAGTTGCCGA 59.385 45.455 0.00 0.00 0.00 5.54
2900 4015 3.252458 GCCCGATTAATTTAGTTGCCGAT 59.748 43.478 0.00 0.00 0.00 4.18
2979 4094 0.033228 CTGACCGCCCTCAGATCATC 59.967 60.000 0.00 0.00 40.28 2.92
2995 4122 3.974871 TCATCCATGTGATCGCAATTG 57.025 42.857 13.91 7.95 0.00 2.32
3002 4129 7.326968 TCCATGTGATCGCAATTGTTAATTA 57.673 32.000 13.91 0.00 0.00 1.40
3003 4130 7.416817 TCCATGTGATCGCAATTGTTAATTAG 58.583 34.615 13.91 0.00 0.00 1.73
3004 4131 7.066887 TCCATGTGATCGCAATTGTTAATTAGT 59.933 33.333 13.91 0.00 0.00 2.24
3005 4132 7.701924 CCATGTGATCGCAATTGTTAATTAGTT 59.298 33.333 13.91 0.00 0.00 2.24
3006 4133 9.075519 CATGTGATCGCAATTGTTAATTAGTTT 57.924 29.630 13.91 0.00 0.00 2.66
3008 4135 9.549509 TGTGATCGCAATTGTTAATTAGTTTAC 57.450 29.630 6.47 0.00 0.00 2.01
3028 4155 7.976734 AGTTTACTACTGCTAATCACATCACTC 59.023 37.037 0.00 0.00 35.19 3.51
3048 4175 1.019805 GCTGGGCGGTTAGTCAGTTC 61.020 60.000 0.00 0.00 0.00 3.01
3096 4223 2.886862 TGAGGTTTTGCATGGTGTTG 57.113 45.000 0.00 0.00 0.00 3.33
3097 4229 1.411977 TGAGGTTTTGCATGGTGTTGG 59.588 47.619 0.00 0.00 0.00 3.77
3426 4564 2.048222 CTGTGCCGATGGTGACGT 60.048 61.111 0.00 0.00 0.00 4.34
3675 4813 0.105709 GAGGAGAAGGAGGAGGAGGG 60.106 65.000 0.00 0.00 0.00 4.30
3676 4814 1.764454 GGAGAAGGAGGAGGAGGGC 60.764 68.421 0.00 0.00 0.00 5.19
3677 4815 1.764454 GAGAAGGAGGAGGAGGGCC 60.764 68.421 0.00 0.00 0.00 5.80
3754 4892 2.811317 GAGGAGCTGTTCGTGGCG 60.811 66.667 0.00 0.00 0.00 5.69
3787 4925 3.470567 CTGCCGTGCTTCGTCGTC 61.471 66.667 0.00 0.00 37.94 4.20
3823 4961 1.807165 CGACCCTCAGTGACATGCG 60.807 63.158 0.00 0.00 0.00 4.73
3852 4990 2.032549 GCACTGCACCAGCTATATTTCG 60.033 50.000 0.00 0.00 42.74 3.46
3869 5007 1.153628 CGCTGTGCACCTACCTACC 60.154 63.158 15.69 0.00 0.00 3.18
3873 5011 1.755380 CTGTGCACCTACCTACCTACC 59.245 57.143 15.69 0.00 0.00 3.18
3874 5012 1.360162 TGTGCACCTACCTACCTACCT 59.640 52.381 15.69 0.00 0.00 3.08
3875 5013 2.582172 TGTGCACCTACCTACCTACCTA 59.418 50.000 15.69 0.00 0.00 3.08
3876 5014 2.954989 GTGCACCTACCTACCTACCTAC 59.045 54.545 5.22 0.00 0.00 3.18
3877 5015 2.582172 TGCACCTACCTACCTACCTACA 59.418 50.000 0.00 0.00 0.00 2.74
3878 5016 3.205959 TGCACCTACCTACCTACCTACAT 59.794 47.826 0.00 0.00 0.00 2.29
3879 5017 4.416513 TGCACCTACCTACCTACCTACATA 59.583 45.833 0.00 0.00 0.00 2.29
3880 5018 5.075483 TGCACCTACCTACCTACCTACATAT 59.925 44.000 0.00 0.00 0.00 1.78
3881 5019 5.418209 GCACCTACCTACCTACCTACATATG 59.582 48.000 0.00 0.00 0.00 1.78
3882 5020 6.550163 CACCTACCTACCTACCTACATATGT 58.450 44.000 13.93 13.93 0.00 2.29
3883 5021 7.693132 CACCTACCTACCTACCTACATATGTA 58.307 42.308 14.75 14.75 0.00 2.29
3884 5022 8.334734 CACCTACCTACCTACCTACATATGTAT 58.665 40.741 15.81 5.21 0.00 2.29
3885 5023 8.334734 ACCTACCTACCTACCTACATATGTATG 58.665 40.741 15.81 15.08 39.55 2.39
3889 5027 9.696572 ACCTACCTACCTACATATGTATGTATG 57.303 37.037 23.17 22.09 45.19 2.39
3890 5028 9.696572 CCTACCTACCTACATATGTATGTATGT 57.303 37.037 26.44 26.44 45.19 2.29
3995 5133 4.684242 AGTATATGTGTGTCAACGTGTGTG 59.316 41.667 0.00 0.00 0.00 3.82
3996 5134 1.732941 ATGTGTGTCAACGTGTGTGT 58.267 45.000 0.00 0.00 0.00 3.72
4001 5139 0.179078 TGTCAACGTGTGTGTACCCC 60.179 55.000 0.00 0.00 0.00 4.95
4003 5141 0.540454 TCAACGTGTGTGTACCCCAA 59.460 50.000 0.00 0.00 0.00 4.12
4014 5152 3.018149 GTGTACCCCAAAACACAACAGA 58.982 45.455 0.94 0.00 44.30 3.41
4047 5185 3.705604 ACAAGTTGTTGCTTACATGCAC 58.294 40.909 1.64 0.00 43.20 4.57
4048 5186 2.686558 AGTTGTTGCTTACATGCACG 57.313 45.000 0.00 0.00 43.20 5.34
4049 5187 1.052287 GTTGTTGCTTACATGCACGC 58.948 50.000 0.00 0.00 43.20 5.34
4050 5188 0.385348 TTGTTGCTTACATGCACGCG 60.385 50.000 3.53 3.53 43.20 6.01
4053 5191 1.502990 TTGCTTACATGCACGCGTGT 61.503 50.000 36.80 21.70 46.53 4.49
4056 5194 1.855978 GCTTACATGCACGCGTGTATA 59.144 47.619 36.34 22.89 44.69 1.47
4058 5196 1.842720 TACATGCACGCGTGTATACC 58.157 50.000 36.34 22.10 43.52 2.73
4059 5197 0.174845 ACATGCACGCGTGTATACCT 59.825 50.000 36.34 21.49 43.52 3.08
4080 5218 5.311265 CCTACCTGGTCGAGTATGTATGTA 58.689 45.833 0.63 0.00 0.00 2.29
4081 5219 5.944599 CCTACCTGGTCGAGTATGTATGTAT 59.055 44.000 0.63 0.00 0.00 2.29
4084 5222 6.301486 ACCTGGTCGAGTATGTATGTATGTA 58.699 40.000 0.00 0.00 0.00 2.29
4090 5228 7.412346 GGTCGAGTATGTATGTATGTACGTAGG 60.412 44.444 0.00 0.00 29.27 3.18
4091 5229 7.116948 GTCGAGTATGTATGTATGTACGTAGGT 59.883 40.741 0.00 0.00 29.27 3.08
4092 5230 8.303876 TCGAGTATGTATGTATGTACGTAGGTA 58.696 37.037 0.00 0.00 29.27 3.08
4117 5255 5.617528 TTGATTTTGATGGGATTGATGGG 57.382 39.130 0.00 0.00 0.00 4.00
4146 5284 7.012610 TCCATGTACTATTGACAGATTTGCATG 59.987 37.037 0.00 0.00 0.00 4.06
4147 5285 7.201758 CCATGTACTATTGACAGATTTGCATGT 60.202 37.037 0.00 0.00 0.00 3.21
4148 5286 7.075674 TGTACTATTGACAGATTTGCATGTG 57.924 36.000 0.00 0.00 0.00 3.21
4149 5287 6.654582 TGTACTATTGACAGATTTGCATGTGT 59.345 34.615 0.00 0.00 39.59 3.72
4150 5288 5.946298 ACTATTGACAGATTTGCATGTGTG 58.054 37.500 0.00 0.00 37.03 3.82
4155 5293 4.519730 TGACAGATTTGCATGTGTGATGAA 59.480 37.500 0.00 0.00 37.03 2.57
4171 5332 9.599866 TGTGTGATGAAGGATTATTTGTAGTAG 57.400 33.333 0.00 0.00 0.00 2.57
4174 5335 9.262358 GTGATGAAGGATTATTTGTAGTAGGAC 57.738 37.037 0.00 0.00 0.00 3.85
4187 5348 1.157513 TAGGACTGGGACACTGGCA 59.842 57.895 0.00 0.00 0.00 4.92
4215 5376 2.862541 TGATTAGCTGTGCAACTTGGT 58.137 42.857 0.00 0.00 38.04 3.67
4216 5377 2.813754 TGATTAGCTGTGCAACTTGGTC 59.186 45.455 0.00 0.00 38.04 4.02
4222 5383 2.813754 GCTGTGCAACTTGGTCTTGATA 59.186 45.455 0.00 0.00 38.04 2.15
4234 5395 7.661040 ACTTGGTCTTGATATTTGTTTGGAAG 58.339 34.615 0.00 0.00 0.00 3.46
4235 5396 7.287696 ACTTGGTCTTGATATTTGTTTGGAAGT 59.712 33.333 0.00 0.00 0.00 3.01
4236 5397 8.698973 TTGGTCTTGATATTTGTTTGGAAGTA 57.301 30.769 0.00 0.00 0.00 2.24
4237 5398 8.335532 TGGTCTTGATATTTGTTTGGAAGTAG 57.664 34.615 0.00 0.00 0.00 2.57
4238 5399 7.094377 TGGTCTTGATATTTGTTTGGAAGTAGC 60.094 37.037 0.00 0.00 0.00 3.58
4239 5400 7.251281 GTCTTGATATTTGTTTGGAAGTAGCC 58.749 38.462 0.00 0.00 0.00 3.93
4240 5401 6.945435 TCTTGATATTTGTTTGGAAGTAGCCA 59.055 34.615 0.00 0.00 35.78 4.75
4241 5402 6.757897 TGATATTTGTTTGGAAGTAGCCAG 57.242 37.500 0.00 0.00 39.52 4.85
4242 5403 6.480763 TGATATTTGTTTGGAAGTAGCCAGA 58.519 36.000 0.00 0.00 39.52 3.86
4244 5405 3.857157 TTGTTTGGAAGTAGCCAGAGT 57.143 42.857 0.00 0.00 39.52 3.24
4268 5430 3.759618 TGATCTGATGCATTGCTCAACAA 59.240 39.130 10.49 1.41 44.01 2.83
4275 5437 2.030007 TGCATTGCTCAACAAAGTAGCC 60.030 45.455 10.49 0.00 42.86 3.93
4286 5448 4.820894 ACAAAGTAGCCGAACCTTCTAT 57.179 40.909 0.00 0.00 0.00 1.98
4287 5449 4.504858 ACAAAGTAGCCGAACCTTCTATG 58.495 43.478 0.00 0.00 0.00 2.23
4288 5450 2.892784 AGTAGCCGAACCTTCTATGC 57.107 50.000 0.00 0.00 0.00 3.14
4289 5451 1.413077 AGTAGCCGAACCTTCTATGCC 59.587 52.381 0.00 0.00 0.00 4.40
4290 5452 1.138266 GTAGCCGAACCTTCTATGCCA 59.862 52.381 0.00 0.00 0.00 4.92
4291 5453 0.839946 AGCCGAACCTTCTATGCCAT 59.160 50.000 0.00 0.00 0.00 4.40
4292 5454 1.202698 AGCCGAACCTTCTATGCCATC 60.203 52.381 0.00 0.00 0.00 3.51
4293 5455 1.884235 CCGAACCTTCTATGCCATCC 58.116 55.000 0.00 0.00 0.00 3.51
4294 5456 1.417890 CCGAACCTTCTATGCCATCCT 59.582 52.381 0.00 0.00 0.00 3.24
4295 5457 2.548920 CCGAACCTTCTATGCCATCCTC 60.549 54.545 0.00 0.00 0.00 3.71
4296 5458 2.548920 CGAACCTTCTATGCCATCCTCC 60.549 54.545 0.00 0.00 0.00 4.30
4299 5461 1.271271 CCTTCTATGCCATCCTCCTGC 60.271 57.143 0.00 0.00 0.00 4.85
4305 5467 1.437397 TGCCATCCTCCTGCATGATA 58.563 50.000 0.00 0.00 0.00 2.15
4324 5486 2.953466 ATGCATGGTCAACTTGATGC 57.047 45.000 0.00 8.36 32.26 3.91
4331 5493 4.968812 TGGTCAACTTGATGCACATATG 57.031 40.909 0.00 0.00 0.00 1.78
4332 5494 4.587891 TGGTCAACTTGATGCACATATGA 58.412 39.130 10.38 0.00 0.00 2.15
4334 5496 5.297527 TGGTCAACTTGATGCACATATGATC 59.702 40.000 10.38 2.81 0.00 2.92
4335 5497 5.297527 GGTCAACTTGATGCACATATGATCA 59.702 40.000 10.38 5.61 0.00 2.92
4336 5498 6.197276 GTCAACTTGATGCACATATGATCAC 58.803 40.000 10.38 3.05 0.00 3.06
4337 5499 5.297527 TCAACTTGATGCACATATGATCACC 59.702 40.000 10.38 0.00 0.00 4.02
4338 5500 4.784177 ACTTGATGCACATATGATCACCA 58.216 39.130 10.38 0.76 0.00 4.17
4339 5501 4.820173 ACTTGATGCACATATGATCACCAG 59.180 41.667 10.38 6.41 0.00 4.00
4340 5502 3.746940 TGATGCACATATGATCACCAGG 58.253 45.455 10.38 0.00 0.00 4.45
4341 5503 3.136992 TGATGCACATATGATCACCAGGT 59.863 43.478 10.38 0.00 0.00 4.00
4353 5525 1.040893 CACCAGGTCCATGCATGCAT 61.041 55.000 27.46 27.46 37.08 3.96
4367 5539 3.127081 CATGCATGCACAGTTAGTCAC 57.873 47.619 25.37 0.00 0.00 3.67
4368 5540 2.252976 TGCATGCACAGTTAGTCACA 57.747 45.000 18.46 0.00 0.00 3.58
4375 5547 3.053455 GCACAGTTAGTCACAGTCTCAC 58.947 50.000 0.00 0.00 0.00 3.51
4383 5555 6.373216 AGTTAGTCACAGTCTCACAGAGATAC 59.627 42.308 0.00 0.00 40.98 2.24
4400 5576 6.884295 CAGAGATACAATCCCACCTTTGTAAA 59.116 38.462 0.24 0.00 40.56 2.01
4401 5577 7.066284 CAGAGATACAATCCCACCTTTGTAAAG 59.934 40.741 0.24 0.00 40.56 1.85
4403 5579 7.238710 AGATACAATCCCACCTTTGTAAAGTT 58.761 34.615 3.90 0.00 40.56 2.66
4404 5580 5.529581 ACAATCCCACCTTTGTAAAGTTG 57.470 39.130 3.90 0.00 34.42 3.16
4406 5582 5.423931 ACAATCCCACCTTTGTAAAGTTGTT 59.576 36.000 3.90 0.00 34.42 2.83
4418 5594 4.691216 TGTAAAGTTGTTGGTTTTGGTTGC 59.309 37.500 0.00 0.00 0.00 4.17
4424 5600 0.835941 TTGGTTTTGGTTGCTGGCAT 59.164 45.000 0.00 0.00 0.00 4.40
4436 5612 1.473677 TGCTGGCATCCTTTTTGATCG 59.526 47.619 0.00 0.00 0.00 3.69
4437 5613 1.745087 GCTGGCATCCTTTTTGATCGA 59.255 47.619 0.00 0.00 0.00 3.59
4440 5616 4.678840 GCTGGCATCCTTTTTGATCGATTT 60.679 41.667 0.00 0.00 0.00 2.17
4452 5628 3.673902 TGATCGATTTTCTGTCAGCCAA 58.326 40.909 0.00 0.00 0.00 4.52
4454 5630 2.844946 TCGATTTTCTGTCAGCCAACA 58.155 42.857 0.00 0.00 0.00 3.33
4456 5632 3.250762 TCGATTTTCTGTCAGCCAACAAG 59.749 43.478 0.00 0.00 0.00 3.16
4510 5692 2.427095 GGTGTCACCAAATAATCCCAGC 59.573 50.000 17.59 0.00 38.42 4.85
4511 5693 2.427095 GTGTCACCAAATAATCCCAGCC 59.573 50.000 0.00 0.00 0.00 4.85
4512 5694 2.311542 TGTCACCAAATAATCCCAGCCT 59.688 45.455 0.00 0.00 0.00 4.58
4513 5695 3.525609 TGTCACCAAATAATCCCAGCCTA 59.474 43.478 0.00 0.00 0.00 3.93
4514 5696 4.167892 TGTCACCAAATAATCCCAGCCTAT 59.832 41.667 0.00 0.00 0.00 2.57
4515 5697 5.140454 GTCACCAAATAATCCCAGCCTATT 58.860 41.667 0.00 0.00 0.00 1.73
4516 5698 5.598417 GTCACCAAATAATCCCAGCCTATTT 59.402 40.000 0.00 0.00 0.00 1.40
4517 5699 5.833131 TCACCAAATAATCCCAGCCTATTTC 59.167 40.000 0.00 0.00 0.00 2.17
4561 5751 4.210331 AGAGGAAATGTTTCTTGCACTGT 58.790 39.130 5.56 0.00 37.35 3.55
4565 5755 5.009010 AGGAAATGTTTCTTGCACTGTACAG 59.991 40.000 21.44 21.44 37.35 2.74
4566 5756 5.008613 GGAAATGTTTCTTGCACTGTACAGA 59.991 40.000 29.30 4.07 37.35 3.41
4569 5759 5.673337 TGTTTCTTGCACTGTACAGATTC 57.327 39.130 29.30 16.32 0.00 2.52
4574 5764 7.462571 TTCTTGCACTGTACAGATTCTACTA 57.537 36.000 29.30 5.45 0.00 1.82
4576 5766 8.747538 TCTTGCACTGTACAGATTCTACTATA 57.252 34.615 29.30 2.17 0.00 1.31
4577 5767 9.355916 TCTTGCACTGTACAGATTCTACTATAT 57.644 33.333 29.30 0.00 0.00 0.86
4579 5769 9.750125 TTGCACTGTACAGATTCTACTATATTG 57.250 33.333 29.30 12.61 0.00 1.90
4580 5770 8.360390 TGCACTGTACAGATTCTACTATATTGG 58.640 37.037 29.30 0.00 0.00 3.16
4585 5776 8.148351 TGTACAGATTCTACTATATTGGTTGGC 58.852 37.037 0.00 0.00 0.00 4.52
4603 5794 8.588290 TGGTTGGCTTAATGAACTAAATACAT 57.412 30.769 0.00 0.00 0.00 2.29
4604 5795 8.682710 TGGTTGGCTTAATGAACTAAATACATC 58.317 33.333 0.00 0.00 0.00 3.06
4623 5814 4.623167 ACATCTAATGCAGATATTCGACGC 59.377 41.667 0.00 0.00 42.40 5.19
4624 5815 3.234386 TCTAATGCAGATATTCGACGCG 58.766 45.455 3.53 3.53 0.00 6.01
4625 5816 0.508641 AATGCAGATATTCGACGCGC 59.491 50.000 5.73 0.00 0.00 6.86
4626 5817 0.597377 ATGCAGATATTCGACGCGCA 60.597 50.000 5.73 0.00 0.00 6.09
4627 5818 0.597377 TGCAGATATTCGACGCGCAT 60.597 50.000 5.73 0.00 0.00 4.73
4628 5819 0.508641 GCAGATATTCGACGCGCATT 59.491 50.000 5.73 0.00 0.00 3.56
4629 5820 1.070577 GCAGATATTCGACGCGCATTT 60.071 47.619 5.73 0.00 0.00 2.32
4630 5821 2.154963 GCAGATATTCGACGCGCATTTA 59.845 45.455 5.73 0.00 0.00 1.40
4631 5822 3.362596 GCAGATATTCGACGCGCATTTAA 60.363 43.478 5.73 0.00 0.00 1.52
4632 5823 4.134546 CAGATATTCGACGCGCATTTAAC 58.865 43.478 5.73 0.00 0.00 2.01
4633 5824 4.049186 AGATATTCGACGCGCATTTAACT 58.951 39.130 5.73 0.00 0.00 2.24
4634 5825 4.506654 AGATATTCGACGCGCATTTAACTT 59.493 37.500 5.73 0.00 0.00 2.66
4635 5826 2.953640 TTCGACGCGCATTTAACTTT 57.046 40.000 5.73 0.00 0.00 2.66
4636 5827 2.220315 TCGACGCGCATTTAACTTTG 57.780 45.000 5.73 0.00 0.00 2.77
4637 5828 1.136197 TCGACGCGCATTTAACTTTGG 60.136 47.619 5.73 0.00 0.00 3.28
4638 5829 0.981956 GACGCGCATTTAACTTTGGC 59.018 50.000 5.73 0.00 0.00 4.52
4639 5830 0.388006 ACGCGCATTTAACTTTGGCC 60.388 50.000 5.73 0.00 0.00 5.36
4640 5831 1.402479 CGCGCATTTAACTTTGGCCG 61.402 55.000 8.75 0.00 0.00 6.13
4641 5832 1.682867 GCGCATTTAACTTTGGCCGC 61.683 55.000 0.30 0.00 0.00 6.53
4642 5833 0.109319 CGCATTTAACTTTGGCCGCT 60.109 50.000 0.00 0.00 0.00 5.52
4643 5834 1.131504 CGCATTTAACTTTGGCCGCTA 59.868 47.619 0.00 0.00 0.00 4.26
4644 5835 2.223479 CGCATTTAACTTTGGCCGCTAT 60.223 45.455 0.00 0.00 0.00 2.97
4645 5836 3.733684 CGCATTTAACTTTGGCCGCTATT 60.734 43.478 0.00 0.00 0.00 1.73
4646 5837 3.551485 GCATTTAACTTTGGCCGCTATTG 59.449 43.478 0.00 0.00 0.00 1.90
4647 5838 4.743493 CATTTAACTTTGGCCGCTATTGT 58.257 39.130 0.00 0.00 0.00 2.71
4648 5839 4.857509 TTTAACTTTGGCCGCTATTGTT 57.142 36.364 0.00 0.00 0.00 2.83
4649 5840 4.857509 TTAACTTTGGCCGCTATTGTTT 57.142 36.364 0.00 0.00 0.00 2.83
4650 5841 3.744238 AACTTTGGCCGCTATTGTTTT 57.256 38.095 0.00 0.00 0.00 2.43
4651 5842 4.857509 AACTTTGGCCGCTATTGTTTTA 57.142 36.364 0.00 0.00 0.00 1.52
4652 5843 5.400066 AACTTTGGCCGCTATTGTTTTAT 57.600 34.783 0.00 0.00 0.00 1.40
4653 5844 6.518208 AACTTTGGCCGCTATTGTTTTATA 57.482 33.333 0.00 0.00 0.00 0.98
4654 5845 6.709018 ACTTTGGCCGCTATTGTTTTATAT 57.291 33.333 0.00 0.00 0.00 0.86
4655 5846 7.811117 ACTTTGGCCGCTATTGTTTTATATA 57.189 32.000 0.00 0.00 0.00 0.86
4656 5847 8.228035 ACTTTGGCCGCTATTGTTTTATATAA 57.772 30.769 0.00 0.00 0.00 0.98
4657 5848 8.688151 ACTTTGGCCGCTATTGTTTTATATAAA 58.312 29.630 3.71 3.71 0.00 1.40
4658 5849 9.691362 CTTTGGCCGCTATTGTTTTATATAAAT 57.309 29.630 8.70 0.00 0.00 1.40
4671 5862 9.757227 TGTTTTATATAAATATGTTGGCCTTGC 57.243 29.630 8.70 0.00 0.00 4.01
4672 5863 9.757227 GTTTTATATAAATATGTTGGCCTTGCA 57.243 29.630 8.70 0.00 0.00 4.08
4678 5869 6.983474 AAATATGTTGGCCTTGCAAAATAC 57.017 33.333 3.32 0.00 0.00 1.89
4679 5870 5.937975 ATATGTTGGCCTTGCAAAATACT 57.062 34.783 3.32 0.00 0.00 2.12
4680 5871 3.658757 TGTTGGCCTTGCAAAATACTC 57.341 42.857 3.32 0.00 0.00 2.59
4681 5872 2.298729 TGTTGGCCTTGCAAAATACTCC 59.701 45.455 3.32 0.00 0.00 3.85
4682 5873 2.562738 GTTGGCCTTGCAAAATACTCCT 59.437 45.455 3.32 0.00 0.00 3.69
4683 5874 2.888212 TGGCCTTGCAAAATACTCCTT 58.112 42.857 3.32 0.00 0.00 3.36
4684 5875 2.825532 TGGCCTTGCAAAATACTCCTTC 59.174 45.455 3.32 0.00 0.00 3.46
4685 5876 2.166459 GGCCTTGCAAAATACTCCTTCC 59.834 50.000 0.00 0.00 0.00 3.46
4686 5877 2.159379 GCCTTGCAAAATACTCCTTCCG 60.159 50.000 0.00 0.00 0.00 4.30
4687 5878 3.081804 CCTTGCAAAATACTCCTTCCGT 58.918 45.455 0.00 0.00 0.00 4.69
4688 5879 3.506067 CCTTGCAAAATACTCCTTCCGTT 59.494 43.478 0.00 0.00 0.00 4.44
4689 5880 4.379499 CCTTGCAAAATACTCCTTCCGTTC 60.379 45.833 0.00 0.00 0.00 3.95
4690 5881 4.015872 TGCAAAATACTCCTTCCGTTCT 57.984 40.909 0.00 0.00 0.00 3.01
4691 5882 3.751175 TGCAAAATACTCCTTCCGTTCTG 59.249 43.478 0.00 0.00 0.00 3.02
4692 5883 3.751698 GCAAAATACTCCTTCCGTTCTGT 59.248 43.478 0.00 0.00 0.00 3.41
4693 5884 4.215613 GCAAAATACTCCTTCCGTTCTGTT 59.784 41.667 0.00 0.00 0.00 3.16
4694 5885 5.410439 GCAAAATACTCCTTCCGTTCTGTTA 59.590 40.000 0.00 0.00 0.00 2.41
4695 5886 6.093633 GCAAAATACTCCTTCCGTTCTGTTAT 59.906 38.462 0.00 0.00 0.00 1.89
4696 5887 7.279313 GCAAAATACTCCTTCCGTTCTGTTATA 59.721 37.037 0.00 0.00 0.00 0.98
4697 5888 9.326413 CAAAATACTCCTTCCGTTCTGTTATAT 57.674 33.333 0.00 0.00 0.00 0.86
4701 5892 7.052142 ACTCCTTCCGTTCTGTTATATAAGG 57.948 40.000 0.00 0.00 34.79 2.69
4702 5893 6.610425 ACTCCTTCCGTTCTGTTATATAAGGT 59.390 38.462 0.00 0.00 35.00 3.50
4703 5894 6.812998 TCCTTCCGTTCTGTTATATAAGGTG 58.187 40.000 0.00 0.00 35.00 4.00
4704 5895 5.465724 CCTTCCGTTCTGTTATATAAGGTGC 59.534 44.000 0.00 0.00 0.00 5.01
4705 5896 5.601583 TCCGTTCTGTTATATAAGGTGCA 57.398 39.130 0.00 0.00 0.00 4.57
4706 5897 6.169557 TCCGTTCTGTTATATAAGGTGCAT 57.830 37.500 0.00 0.00 0.00 3.96
4707 5898 6.588204 TCCGTTCTGTTATATAAGGTGCATT 58.412 36.000 0.00 0.00 0.00 3.56
4708 5899 7.051623 TCCGTTCTGTTATATAAGGTGCATTT 58.948 34.615 0.00 0.00 0.00 2.32
4709 5900 8.205512 TCCGTTCTGTTATATAAGGTGCATTTA 58.794 33.333 0.00 0.00 0.00 1.40
4710 5901 8.999431 CCGTTCTGTTATATAAGGTGCATTTAT 58.001 33.333 10.21 10.21 0.00 1.40
4736 5927 6.831727 TTTGAAAAGTCAAATGAGTGCATG 57.168 33.333 0.00 0.00 46.48 4.06
4737 5928 5.518848 TGAAAAGTCAAATGAGTGCATGT 57.481 34.783 0.00 0.00 34.26 3.21
4738 5929 5.904941 TGAAAAGTCAAATGAGTGCATGTT 58.095 33.333 0.00 0.00 34.26 2.71
4739 5930 6.339730 TGAAAAGTCAAATGAGTGCATGTTT 58.660 32.000 0.00 0.00 34.26 2.83
4740 5931 6.256104 TGAAAAGTCAAATGAGTGCATGTTTG 59.744 34.615 0.00 0.00 34.26 2.93
4751 5942 2.939460 GCATGTTTGCCCGAGTTTAT 57.061 45.000 0.00 0.00 43.38 1.40
4753 5944 3.952535 GCATGTTTGCCCGAGTTTATAG 58.047 45.455 0.00 0.00 43.38 1.31
4754 5945 3.625764 GCATGTTTGCCCGAGTTTATAGA 59.374 43.478 0.00 0.00 43.38 1.98
4755 5946 4.095782 GCATGTTTGCCCGAGTTTATAGAA 59.904 41.667 0.00 0.00 43.38 2.10
4756 5947 5.392595 GCATGTTTGCCCGAGTTTATAGAAA 60.393 40.000 0.00 0.00 43.38 2.52
4757 5948 6.616947 CATGTTTGCCCGAGTTTATAGAAAA 58.383 36.000 0.00 0.00 0.00 2.29
4758 5949 6.636562 TGTTTGCCCGAGTTTATAGAAAAA 57.363 33.333 0.00 0.00 0.00 1.94
4759 5950 7.222000 TGTTTGCCCGAGTTTATAGAAAAAT 57.778 32.000 0.00 0.00 0.00 1.82
4760 5951 8.338072 TGTTTGCCCGAGTTTATAGAAAAATA 57.662 30.769 0.00 0.00 0.00 1.40
4761 5952 8.962679 TGTTTGCCCGAGTTTATAGAAAAATAT 58.037 29.630 0.00 0.00 0.00 1.28
4814 6005 9.939802 TTATATCACTTGATCCATCATGAAGAG 57.060 33.333 0.00 0.00 36.56 2.85
4815 6006 5.688814 TCACTTGATCCATCATGAAGAGT 57.311 39.130 0.00 0.00 36.56 3.24
4816 6007 6.796785 TCACTTGATCCATCATGAAGAGTA 57.203 37.500 0.00 0.00 36.56 2.59
4817 6008 6.577103 TCACTTGATCCATCATGAAGAGTAC 58.423 40.000 0.00 0.00 36.56 2.73
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 9.261180 CAAATCGATACCACATGAAAGTAGTAT 57.739 33.333 0.00 0.00 30.69 2.12
20 21 7.709182 CCAAATCGATACCACATGAAAGTAGTA 59.291 37.037 0.00 0.00 0.00 1.82
21 22 6.538742 CCAAATCGATACCACATGAAAGTAGT 59.461 38.462 0.00 0.00 0.00 2.73
22 23 6.538742 ACCAAATCGATACCACATGAAAGTAG 59.461 38.462 0.00 0.00 0.00 2.57
23 24 6.411376 ACCAAATCGATACCACATGAAAGTA 58.589 36.000 0.00 0.00 0.00 2.24
24 25 5.253330 ACCAAATCGATACCACATGAAAGT 58.747 37.500 0.00 0.00 0.00 2.66
25 26 5.818136 ACCAAATCGATACCACATGAAAG 57.182 39.130 0.00 0.00 0.00 2.62
26 27 5.475220 ACAACCAAATCGATACCACATGAAA 59.525 36.000 0.00 0.00 0.00 2.69
27 28 5.007034 ACAACCAAATCGATACCACATGAA 58.993 37.500 0.00 0.00 0.00 2.57
28 29 4.394610 CACAACCAAATCGATACCACATGA 59.605 41.667 0.00 0.00 0.00 3.07
29 30 4.438608 CCACAACCAAATCGATACCACATG 60.439 45.833 0.00 0.00 0.00 3.21
30 31 3.694072 CCACAACCAAATCGATACCACAT 59.306 43.478 0.00 0.00 0.00 3.21
31 32 3.078097 CCACAACCAAATCGATACCACA 58.922 45.455 0.00 0.00 0.00 4.17
32 33 2.422127 CCCACAACCAAATCGATACCAC 59.578 50.000 0.00 0.00 0.00 4.16
33 34 2.040545 ACCCACAACCAAATCGATACCA 59.959 45.455 0.00 0.00 0.00 3.25
34 35 2.718563 ACCCACAACCAAATCGATACC 58.281 47.619 0.00 0.00 0.00 2.73
35 36 4.761975 TCTACCCACAACCAAATCGATAC 58.238 43.478 0.00 0.00 0.00 2.24
36 37 4.712829 TCTCTACCCACAACCAAATCGATA 59.287 41.667 0.00 0.00 0.00 2.92
37 38 3.517901 TCTCTACCCACAACCAAATCGAT 59.482 43.478 0.00 0.00 0.00 3.59
38 39 2.901192 TCTCTACCCACAACCAAATCGA 59.099 45.455 0.00 0.00 0.00 3.59
39 40 3.328382 TCTCTACCCACAACCAAATCG 57.672 47.619 0.00 0.00 0.00 3.34
40 41 5.990668 ACTATCTCTACCCACAACCAAATC 58.009 41.667 0.00 0.00 0.00 2.17
41 42 6.388619 AACTATCTCTACCCACAACCAAAT 57.611 37.500 0.00 0.00 0.00 2.32
42 43 5.836024 AACTATCTCTACCCACAACCAAA 57.164 39.130 0.00 0.00 0.00 3.28
43 44 5.836024 AAACTATCTCTACCCACAACCAA 57.164 39.130 0.00 0.00 0.00 3.67
44 45 5.546499 AGAAAACTATCTCTACCCACAACCA 59.454 40.000 0.00 0.00 0.00 3.67
45 46 6.051179 AGAAAACTATCTCTACCCACAACC 57.949 41.667 0.00 0.00 0.00 3.77
96 97 9.255304 GCATAGGTTTTCATTCACAAAAGTTAA 57.745 29.630 0.00 0.00 0.00 2.01
97 98 7.593273 CGCATAGGTTTTCATTCACAAAAGTTA 59.407 33.333 0.00 0.00 0.00 2.24
98 99 6.420604 CGCATAGGTTTTCATTCACAAAAGTT 59.579 34.615 0.00 0.00 0.00 2.66
99 100 5.920273 CGCATAGGTTTTCATTCACAAAAGT 59.080 36.000 0.00 0.00 0.00 2.66
100 101 5.345741 CCGCATAGGTTTTCATTCACAAAAG 59.654 40.000 0.00 0.00 34.51 2.27
101 102 5.226396 CCGCATAGGTTTTCATTCACAAAA 58.774 37.500 0.00 0.00 34.51 2.44
102 103 4.804108 CCGCATAGGTTTTCATTCACAAA 58.196 39.130 0.00 0.00 34.51 2.83
103 104 3.366883 GCCGCATAGGTTTTCATTCACAA 60.367 43.478 0.00 0.00 43.70 3.33
104 105 2.163412 GCCGCATAGGTTTTCATTCACA 59.837 45.455 0.00 0.00 43.70 3.58
105 106 2.791158 CGCCGCATAGGTTTTCATTCAC 60.791 50.000 0.00 0.00 43.70 3.18
106 107 1.400142 CGCCGCATAGGTTTTCATTCA 59.600 47.619 0.00 0.00 43.70 2.57
107 108 1.859998 GCGCCGCATAGGTTTTCATTC 60.860 52.381 3.15 0.00 43.70 2.67
108 109 0.100503 GCGCCGCATAGGTTTTCATT 59.899 50.000 3.15 0.00 43.70 2.57
109 110 1.724582 GGCGCCGCATAGGTTTTCAT 61.725 55.000 12.58 0.00 43.70 2.57
110 111 2.403378 GGCGCCGCATAGGTTTTCA 61.403 57.895 12.58 0.00 43.70 2.69
111 112 1.724582 ATGGCGCCGCATAGGTTTTC 61.725 55.000 23.90 0.00 43.70 2.29
112 113 0.464735 TATGGCGCCGCATAGGTTTT 60.465 50.000 23.90 0.00 43.70 2.43
113 114 0.250727 ATATGGCGCCGCATAGGTTT 60.251 50.000 23.90 0.00 43.70 3.27
114 115 0.673644 GATATGGCGCCGCATAGGTT 60.674 55.000 23.90 0.00 43.70 3.50
115 116 1.079127 GATATGGCGCCGCATAGGT 60.079 57.895 23.90 2.68 43.70 3.08
116 117 2.167219 CGATATGGCGCCGCATAGG 61.167 63.158 23.90 8.86 44.97 2.57
117 118 0.179148 TACGATATGGCGCCGCATAG 60.179 55.000 23.90 18.86 33.86 2.23
118 119 0.458260 ATACGATATGGCGCCGCATA 59.542 50.000 23.90 15.60 33.86 3.14
119 120 1.083806 CATACGATATGGCGCCGCAT 61.084 55.000 23.90 17.48 33.86 4.73
120 121 1.736282 CATACGATATGGCGCCGCA 60.736 57.895 23.90 12.69 33.86 5.69
121 122 1.445410 TCATACGATATGGCGCCGC 60.445 57.895 23.90 10.18 33.86 6.53
122 123 1.403225 CGTCATACGATATGGCGCCG 61.403 60.000 23.90 12.05 46.05 6.46
136 137 3.963428 AAGCACTACTTCTTCCGTCAT 57.037 42.857 0.00 0.00 30.77 3.06
154 155 1.880027 CCCTCCGAACAAACCAAGAAG 59.120 52.381 0.00 0.00 0.00 2.85
157 158 0.951558 CACCCTCCGAACAAACCAAG 59.048 55.000 0.00 0.00 0.00 3.61
184 185 7.930513 TTGACATCGATTGAGATATGTGTAC 57.069 36.000 0.00 0.00 32.87 2.90
189 190 7.279313 TGGCATATTGACATCGATTGAGATATG 59.721 37.037 16.64 16.64 33.56 1.78
190 191 7.333323 TGGCATATTGACATCGATTGAGATAT 58.667 34.615 0.00 0.00 24.43 1.63
191 192 6.700352 TGGCATATTGACATCGATTGAGATA 58.300 36.000 0.00 0.00 24.43 1.98
196 197 5.446340 CGGTATGGCATATTGACATCGATTG 60.446 44.000 10.92 0.00 44.20 2.67
201 202 5.178061 TCATCGGTATGGCATATTGACATC 58.822 41.667 10.92 0.00 44.20 3.06
203 204 4.615588 TCATCGGTATGGCATATTGACA 57.384 40.909 10.92 0.38 41.29 3.58
205 206 3.940852 GCATCATCGGTATGGCATATTGA 59.059 43.478 10.92 11.69 33.61 2.57
254 255 1.097547 GGTCGTCGTCGGGAGGATTA 61.098 60.000 1.55 0.00 41.23 1.75
273 274 6.715347 AATCCCCTTTTCAATAAATCCTCG 57.285 37.500 0.00 0.00 0.00 4.63
274 275 8.078060 TGAAATCCCCTTTTCAATAAATCCTC 57.922 34.615 0.00 0.00 41.39 3.71
298 320 8.739649 ACAACAAATTTGTGAAAATGGTTTTG 57.260 26.923 23.93 15.24 41.31 2.44
309 331 7.776107 TGACTGGAATAACAACAAATTTGTGA 58.224 30.769 23.93 10.62 41.31 3.58
388 413 2.858745 CTCTACTCCAGCTACCTCTCC 58.141 57.143 0.00 0.00 0.00 3.71
389 414 2.227194 GCTCTACTCCAGCTACCTCTC 58.773 57.143 0.00 0.00 33.75 3.20
390 415 1.133606 GGCTCTACTCCAGCTACCTCT 60.134 57.143 0.00 0.00 37.05 3.69
391 416 1.133606 AGGCTCTACTCCAGCTACCTC 60.134 57.143 0.00 0.00 37.05 3.85
418 443 1.963338 GAGACCTGCTGTGGTGTGC 60.963 63.158 1.58 0.00 41.00 4.57
424 449 0.037512 CTGACCTGAGACCTGCTGTG 60.038 60.000 0.00 0.00 0.00 3.66
425 450 1.825281 GCTGACCTGAGACCTGCTGT 61.825 60.000 0.00 0.00 0.00 4.40
426 451 1.079266 GCTGACCTGAGACCTGCTG 60.079 63.158 0.00 0.00 0.00 4.41
427 452 2.289532 GGCTGACCTGAGACCTGCT 61.290 63.158 0.00 0.00 0.00 4.24
457 482 2.523015 GTCGCGTCTCCGATTTAAAGA 58.477 47.619 5.77 0.00 39.67 2.52
459 484 1.261989 CGTCGCGTCTCCGATTTAAA 58.738 50.000 5.77 0.00 39.67 1.52
460 485 1.135699 GCGTCGCGTCTCCGATTTAA 61.136 55.000 5.77 0.00 39.67 1.52
461 486 1.584483 GCGTCGCGTCTCCGATTTA 60.584 57.895 5.77 0.00 39.67 1.40
462 487 2.879462 GCGTCGCGTCTCCGATTT 60.879 61.111 5.77 0.00 39.67 2.17
463 488 4.849329 GGCGTCGCGTCTCCGATT 62.849 66.667 11.75 0.00 39.67 3.34
466 491 4.246206 TATGGCGTCGCGTCTCCG 62.246 66.667 11.75 5.93 30.55 4.63
468 493 3.017314 CGTATGGCGTCGCGTCTC 61.017 66.667 11.75 0.00 35.54 3.36
469 494 4.547905 CCGTATGGCGTCGCGTCT 62.548 66.667 11.75 0.43 39.32 4.18
470 495 4.541482 TCCGTATGGCGTCGCGTC 62.541 66.667 11.75 0.00 39.32 5.19
474 503 1.872234 CTGTGTCCGTATGGCGTCG 60.872 63.158 0.00 0.00 39.32 5.12
496 525 1.209275 CTGCTAGTATCCGTGTGCGC 61.209 60.000 0.00 0.00 36.67 6.09
497 526 1.209275 GCTGCTAGTATCCGTGTGCG 61.209 60.000 0.00 0.00 37.95 5.34
498 527 0.179111 TGCTGCTAGTATCCGTGTGC 60.179 55.000 0.00 0.00 0.00 4.57
499 528 1.845266 CTGCTGCTAGTATCCGTGTG 58.155 55.000 0.00 0.00 0.00 3.82
516 545 2.623878 AATGAGATGGAGCTGAGCTG 57.376 50.000 13.71 0.00 39.88 4.24
522 551 2.775890 CGCCATTAATGAGATGGAGCT 58.224 47.619 17.23 0.00 45.59 4.09
530 559 1.869767 GTGGAGAGCGCCATTAATGAG 59.130 52.381 17.23 11.12 40.68 2.90
728 772 4.475135 GCGGGGCTCTTCCTGGAC 62.475 72.222 0.00 0.00 33.82 4.02
990 1037 4.519437 TCGCGCATGGAGCAGAGG 62.519 66.667 8.75 0.00 46.13 3.69
1098 1153 0.672711 ACGACGACGAGGAGTGATGA 60.673 55.000 15.32 0.00 42.66 2.92
1101 1156 2.378084 CGACGACGACGAGGAGTGA 61.378 63.158 15.32 0.00 42.66 3.41
1131 1190 4.954118 AGTGAGGACGGGTGCCCA 62.954 66.667 8.14 0.00 35.37 5.36
1155 1214 3.477224 CTCGTAGCAGCCGGAGAGC 62.477 68.421 5.05 5.14 0.00 4.09
1302 1381 6.586344 TCCTGAATTTGTTGGCAATTAACAA 58.414 32.000 1.92 0.00 43.88 2.83
1453 2041 3.580100 ATCGATCGATGCAGGGCGG 62.580 63.158 28.90 0.00 32.98 6.13
1454 2042 2.048784 ATCGATCGATGCAGGGCG 60.049 61.111 28.90 0.00 32.98 6.13
1455 2043 3.559024 CATCGATCGATGCAGGGC 58.441 61.111 37.03 0.00 44.27 5.19
1485 2073 1.401530 CGATTTTCGCGGTCGCTATA 58.598 50.000 6.13 0.00 39.32 1.31
1486 2074 1.213094 CCGATTTTCGCGGTCGCTAT 61.213 55.000 6.13 1.98 43.66 2.97
1487 2075 1.874915 CCGATTTTCGCGGTCGCTA 60.875 57.895 6.13 0.00 43.66 4.26
1488 2076 3.186047 CCGATTTTCGCGGTCGCT 61.186 61.111 6.13 0.00 43.66 4.93
1532 2173 7.428826 CACATGCATAGTGTAGATCTTCTGTA 58.571 38.462 16.46 0.00 32.44 2.74
1533 2174 6.279123 CACATGCATAGTGTAGATCTTCTGT 58.721 40.000 16.46 0.00 32.44 3.41
1534 2175 6.766452 CACATGCATAGTGTAGATCTTCTG 57.234 41.667 16.46 0.00 32.44 3.02
1547 2188 7.148705 CCACAAAAATCTTCAACACATGCATAG 60.149 37.037 0.00 0.00 0.00 2.23
1570 2215 9.236691 CTATCACACATAATTAATTTGCACCAC 57.763 33.333 5.91 0.00 0.00 4.16
1705 2444 2.936553 GCCCATCATTTTGACCAAAGGC 60.937 50.000 5.74 5.74 30.61 4.35
1706 2445 2.568509 AGCCCATCATTTTGACCAAAGG 59.431 45.455 0.00 0.00 0.00 3.11
1749 2488 3.204158 TCCATTGGTGCCATGTATACCTT 59.796 43.478 1.86 0.00 35.51 3.50
1753 2492 2.862541 GCTCCATTGGTGCCATGTATA 58.137 47.619 17.11 0.00 36.35 1.47
1756 2495 4.023137 GCTCCATTGGTGCCATGT 57.977 55.556 17.11 0.00 36.35 3.21
1804 2554 3.432326 CCACTAAACCACTAGATCAGGGC 60.432 52.174 0.00 0.00 0.00 5.19
1806 2556 5.178797 CAACCACTAAACCACTAGATCAGG 58.821 45.833 0.00 0.00 0.00 3.86
1818 2574 9.676861 ATTACTAACCTAATCCAACCACTAAAC 57.323 33.333 0.00 0.00 0.00 2.01
1836 2595 6.009908 AGGGTGTGGGGATAAATTACTAAC 57.990 41.667 0.00 0.00 0.00 2.34
1847 2606 1.077265 CAAGCAAGGGTGTGGGGAT 59.923 57.895 0.00 0.00 0.00 3.85
1849 2608 3.305516 GCAAGCAAGGGTGTGGGG 61.306 66.667 0.00 0.00 0.00 4.96
1851 2610 3.673484 CGGCAAGCAAGGGTGTGG 61.673 66.667 0.00 0.00 0.00 4.17
1868 2643 4.216472 TCTCACTATCTCTCACACACACAC 59.784 45.833 0.00 0.00 0.00 3.82
1945 2731 4.610333 ACAAAGGGAAAGAGGTGAAAAGT 58.390 39.130 0.00 0.00 0.00 2.66
2033 2828 9.613428 TCATCCGAAATATTATAATTAGGGCAG 57.387 33.333 2.68 0.00 0.00 4.85
2142 2945 9.757227 AGTAAGTAAGCAATTGATCTTAGCTAG 57.243 33.333 10.34 0.00 34.66 3.42
2204 3023 2.681706 CCAACACTAGCTCACTGTCTG 58.318 52.381 0.00 0.00 0.00 3.51
2215 3034 1.135315 GCGTGCATGCCAACACTAG 59.865 57.895 20.59 0.00 34.58 2.57
2259 3092 5.413523 GTGGTGTAAGTGGTTTAATAGTGGG 59.586 44.000 0.00 0.00 0.00 4.61
2263 3096 7.281549 GGTATGGTGGTGTAAGTGGTTTAATAG 59.718 40.741 0.00 0.00 0.00 1.73
2271 3104 2.010043 GCGGTATGGTGGTGTAAGTGG 61.010 57.143 0.00 0.00 0.00 4.00
2274 3107 0.808453 CGGCGGTATGGTGGTGTAAG 60.808 60.000 0.00 0.00 0.00 2.34
2321 3159 2.158827 TCTTGCAGGCTTGTAACTGTGA 60.159 45.455 0.00 0.00 37.07 3.58
2325 3163 3.341823 CTCATCTTGCAGGCTTGTAACT 58.658 45.455 0.00 0.00 0.00 2.24
2378 3416 4.260784 CCGCTATAAATTGAAGGCACTGTC 60.261 45.833 0.00 0.00 40.86 3.51
2419 3457 2.575108 CATGCATGCAGTCCCACTT 58.425 52.632 26.69 3.09 0.00 3.16
2420 3458 4.331622 CATGCATGCAGTCCCACT 57.668 55.556 26.69 3.94 0.00 4.00
2437 3508 3.379372 ACAACAAGCAGACATGGATATGC 59.621 43.478 0.00 1.51 37.85 3.14
2441 3512 6.835174 AGATATACAACAAGCAGACATGGAT 58.165 36.000 0.00 0.00 0.00 3.41
2442 3513 6.239217 AGATATACAACAAGCAGACATGGA 57.761 37.500 0.00 0.00 0.00 3.41
2443 3514 6.986231 TGTAGATATACAACAAGCAGACATGG 59.014 38.462 0.00 0.00 0.00 3.66
2444 3515 7.708322 AGTGTAGATATACAACAAGCAGACATG 59.292 37.037 0.87 0.00 0.00 3.21
2445 3516 7.786030 AGTGTAGATATACAACAAGCAGACAT 58.214 34.615 0.87 0.00 0.00 3.06
2446 3517 7.170393 AGTGTAGATATACAACAAGCAGACA 57.830 36.000 0.87 0.00 0.00 3.41
2447 3518 9.751542 ATAAGTGTAGATATACAACAAGCAGAC 57.248 33.333 0.87 0.00 0.00 3.51
2448 3519 9.967346 GATAAGTGTAGATATACAACAAGCAGA 57.033 33.333 0.87 0.00 0.00 4.26
2449 3520 9.973450 AGATAAGTGTAGATATACAACAAGCAG 57.027 33.333 0.87 0.00 0.00 4.24
2450 3521 9.750125 CAGATAAGTGTAGATATACAACAAGCA 57.250 33.333 0.87 0.00 0.00 3.91
2451 3522 9.967346 TCAGATAAGTGTAGATATACAACAAGC 57.033 33.333 0.87 0.00 0.00 4.01
2474 3545 7.443575 TCCTTCATTTTGTTTTCTCTCTCTCAG 59.556 37.037 0.00 0.00 0.00 3.35
2482 3553 6.300354 TCTCGTCCTTCATTTTGTTTTCTC 57.700 37.500 0.00 0.00 0.00 2.87
2502 3573 4.326548 GCATGCAAAGCTTCATCTTTTCTC 59.673 41.667 14.21 0.00 34.31 2.87
2516 3587 5.865013 TCACTTTCAATATGTGCATGCAAAG 59.135 36.000 24.58 20.71 33.21 2.77
2525 3596 7.747799 GTGTTCATGTCTCACTTTCAATATGTG 59.252 37.037 0.00 0.00 34.18 3.21
2530 3601 5.589855 TGTGTGTTCATGTCTCACTTTCAAT 59.410 36.000 18.34 0.00 33.82 2.57
2559 3630 1.200483 CACGAGTGTGTCTGTGTGTC 58.800 55.000 0.00 0.00 41.34 3.67
2560 3631 3.345737 CACGAGTGTGTCTGTGTGT 57.654 52.632 0.00 0.00 41.34 3.72
2594 3665 4.830046 ACGAGTTATAGCAGATGATGGTCT 59.170 41.667 0.00 0.00 40.89 3.85
2620 3691 4.104696 TCATGAGACAAGCATGCAAATG 57.895 40.909 21.98 17.46 42.13 2.32
2621 3692 4.021807 TGTTCATGAGACAAGCATGCAAAT 60.022 37.500 21.98 3.55 42.13 2.32
2622 3693 3.318557 TGTTCATGAGACAAGCATGCAAA 59.681 39.130 21.98 0.00 42.13 3.68
2660 3731 4.030452 GCCGCAACAGTGTCAGCC 62.030 66.667 13.22 0.00 0.00 4.85
2725 3801 4.470304 AGACATTAAGGGAGAAGGTACACC 59.530 45.833 0.00 0.00 0.00 4.16
2744 3820 5.105351 CCACTAGTACATGGACATGAAGACA 60.105 44.000 18.38 0.00 41.20 3.41
2750 3826 4.649674 ACCTACCACTAGTACATGGACATG 59.350 45.833 11.55 10.57 44.15 3.21
2765 3841 2.162408 GTCCAGTACGTACACCTACCAC 59.838 54.545 26.55 9.67 0.00 4.16
2778 3854 5.884792 AGTATGTACACCAGTAGTCCAGTAC 59.115 44.000 0.00 0.00 34.11 2.73
2779 3855 6.070951 AGTATGTACACCAGTAGTCCAGTA 57.929 41.667 0.00 0.00 0.00 2.74
2780 3856 4.931914 AGTATGTACACCAGTAGTCCAGT 58.068 43.478 0.00 0.00 0.00 4.00
2781 3857 5.916661 AAGTATGTACACCAGTAGTCCAG 57.083 43.478 0.00 0.00 0.00 3.86
2782 3858 6.268158 TGAAAAGTATGTACACCAGTAGTCCA 59.732 38.462 0.00 0.00 0.00 4.02
2783 3859 6.589139 GTGAAAAGTATGTACACCAGTAGTCC 59.411 42.308 0.00 0.00 0.00 3.85
2784 3860 6.589139 GGTGAAAAGTATGTACACCAGTAGTC 59.411 42.308 0.00 0.00 46.75 2.59
2785 3861 6.461640 GGTGAAAAGTATGTACACCAGTAGT 58.538 40.000 0.00 0.00 46.75 2.73
2786 3862 6.963049 GGTGAAAAGTATGTACACCAGTAG 57.037 41.667 0.00 0.00 46.75 2.57
2792 3868 8.287503 CCTAAAACAGGTGAAAAGTATGTACAC 58.712 37.037 0.00 0.00 39.91 2.90
2793 3869 8.385898 CCTAAAACAGGTGAAAAGTATGTACA 57.614 34.615 0.00 0.00 39.91 2.90
2815 3891 3.199442 TCCAATCAGTCCTCCAACCTA 57.801 47.619 0.00 0.00 0.00 3.08
2823 3899 0.678048 GGCGCTTTCCAATCAGTCCT 60.678 55.000 7.64 0.00 0.00 3.85
2834 3910 0.524816 CAGTGATGCATGGCGCTTTC 60.525 55.000 2.46 0.00 43.06 2.62
2852 3928 4.502105 TCTGTATTGATTAAGGCAGGCA 57.498 40.909 0.00 0.00 0.00 4.75
2854 3930 6.148480 GCTGTATCTGTATTGATTAAGGCAGG 59.852 42.308 0.00 0.00 0.00 4.85
2881 3996 6.887368 TCATCATCGGCAACTAAATTAATCG 58.113 36.000 0.00 0.00 0.00 3.34
2963 4078 0.765903 ATGGATGATCTGAGGGCGGT 60.766 55.000 0.00 0.00 0.00 5.68
2979 4094 7.195646 ACTAATTAACAATTGCGATCACATGG 58.804 34.615 5.05 0.00 32.38 3.66
3002 4129 7.841956 AGTGATGTGATTAGCAGTAGTAAACT 58.158 34.615 0.00 0.00 39.81 2.66
3003 4130 7.043986 CGAGTGATGTGATTAGCAGTAGTAAAC 60.044 40.741 0.00 0.00 0.00 2.01
3004 4131 6.972901 CGAGTGATGTGATTAGCAGTAGTAAA 59.027 38.462 0.00 0.00 0.00 2.01
3005 4132 6.495706 CGAGTGATGTGATTAGCAGTAGTAA 58.504 40.000 0.00 0.00 0.00 2.24
3006 4133 5.505819 GCGAGTGATGTGATTAGCAGTAGTA 60.506 44.000 0.00 0.00 0.00 1.82
3007 4134 4.734989 GCGAGTGATGTGATTAGCAGTAGT 60.735 45.833 0.00 0.00 0.00 2.73
3008 4135 3.733224 GCGAGTGATGTGATTAGCAGTAG 59.267 47.826 0.00 0.00 0.00 2.57
3072 4199 4.881920 ACACCATGCAAAACCTCAATAAC 58.118 39.130 0.00 0.00 0.00 1.89
3097 4229 3.883744 CTCCGACACTGCCCACCAC 62.884 68.421 0.00 0.00 0.00 4.16
3139 4271 4.436332 TGAAGATGATCTCCACGATGTTG 58.564 43.478 0.00 0.00 30.84 3.33
3414 4552 2.576053 CGTCGACGTCACCATCGG 60.576 66.667 29.08 0.00 38.86 4.18
3649 4787 2.044252 TCCTTCTCCTCCCCGTCG 60.044 66.667 0.00 0.00 0.00 5.12
3662 4800 2.041928 CTGGCCCTCCTCCTCCTT 59.958 66.667 0.00 0.00 0.00 3.36
3684 4822 2.342279 CCACCGAGTCGAAAGGCA 59.658 61.111 15.64 0.00 38.99 4.75
3754 4892 3.023735 AGGATGGCCCTGGGGTTC 61.024 66.667 16.03 0.00 45.61 3.62
3809 4947 0.933097 GCATACGCATGTCACTGAGG 59.067 55.000 0.00 0.00 38.36 3.86
3811 4949 3.830679 TGCATACGCATGTCACTGA 57.169 47.368 0.00 0.00 45.36 3.41
3830 4968 2.715749 AATATAGCTGGTGCAGTGCA 57.284 45.000 15.37 15.37 42.74 4.57
3835 4973 2.620251 AGCGAAATATAGCTGGTGCA 57.380 45.000 0.00 0.00 42.82 4.57
3852 4990 1.136500 GTAGGTAGGTAGGTGCACAGC 59.864 57.143 20.43 8.81 0.00 4.40
3911 5049 4.416505 AGTAGACAAGTAGCACGTACAC 57.583 45.455 0.00 0.00 33.55 2.90
3919 5057 6.726230 TGATCGATACAAGTAGACAAGTAGC 58.274 40.000 0.00 0.00 0.00 3.58
3977 5115 1.732941 ACACACACGTTGACACACAT 58.267 45.000 5.01 0.00 0.00 3.21
3995 5133 4.722361 TTTCTGTTGTGTTTTGGGGTAC 57.278 40.909 0.00 0.00 0.00 3.34
3996 5134 7.070074 ACAATATTTCTGTTGTGTTTTGGGGTA 59.930 33.333 0.00 0.00 35.63 3.69
4014 5152 8.940768 AAGCAACAACTTGTAACACAATATTT 57.059 26.923 0.00 0.00 37.48 1.40
4024 5162 5.506686 TGCATGTAAGCAACAACTTGTAA 57.493 34.783 0.00 0.00 42.70 2.41
4047 5185 3.859650 CCAGGTAGGTATACACGCG 57.140 57.895 3.53 3.53 33.21 6.01
4058 5196 6.430308 ACATACATACATACTCGACCAGGTAG 59.570 42.308 0.00 0.00 0.00 3.18
4059 5197 6.301486 ACATACATACATACTCGACCAGGTA 58.699 40.000 0.00 0.00 0.00 3.08
4084 5222 5.588648 CCCATCAAAATCAATGTACCTACGT 59.411 40.000 0.00 0.00 0.00 3.57
4090 5228 7.654520 CCATCAATCCCATCAAAATCAATGTAC 59.345 37.037 0.00 0.00 0.00 2.90
4091 5229 7.202020 CCCATCAATCCCATCAAAATCAATGTA 60.202 37.037 0.00 0.00 0.00 2.29
4092 5230 6.408776 CCCATCAATCCCATCAAAATCAATGT 60.409 38.462 0.00 0.00 0.00 2.71
4093 5231 5.995282 CCCATCAATCCCATCAAAATCAATG 59.005 40.000 0.00 0.00 0.00 2.82
4094 5232 5.455612 GCCCATCAATCCCATCAAAATCAAT 60.456 40.000 0.00 0.00 0.00 2.57
4095 5233 4.141665 GCCCATCAATCCCATCAAAATCAA 60.142 41.667 0.00 0.00 0.00 2.57
4117 5255 7.412853 CAAATCTGTCAATAGTACATGGAAGC 58.587 38.462 0.00 0.00 0.00 3.86
4133 5271 4.690184 TCATCACACATGCAAATCTGTC 57.310 40.909 0.00 0.00 0.00 3.51
4146 5284 9.046296 CCTACTACAAATAATCCTTCATCACAC 57.954 37.037 0.00 0.00 0.00 3.82
4147 5285 8.988060 TCCTACTACAAATAATCCTTCATCACA 58.012 33.333 0.00 0.00 0.00 3.58
4148 5286 9.262358 GTCCTACTACAAATAATCCTTCATCAC 57.738 37.037 0.00 0.00 0.00 3.06
4149 5287 9.213777 AGTCCTACTACAAATAATCCTTCATCA 57.786 33.333 0.00 0.00 0.00 3.07
4150 5288 9.482627 CAGTCCTACTACAAATAATCCTTCATC 57.517 37.037 0.00 0.00 0.00 2.92
4155 5293 6.326843 GTCCCAGTCCTACTACAAATAATCCT 59.673 42.308 0.00 0.00 0.00 3.24
4171 5332 1.078143 GATGCCAGTGTCCCAGTCC 60.078 63.158 0.00 0.00 0.00 3.85
4174 5335 1.381928 GCATGATGCCAGTGTCCCAG 61.382 60.000 6.04 0.00 37.42 4.45
4215 5376 6.945435 TGGCTACTTCCAAACAAATATCAAGA 59.055 34.615 0.00 0.00 32.18 3.02
4216 5377 7.121168 TCTGGCTACTTCCAAACAAATATCAAG 59.879 37.037 0.00 0.00 35.36 3.02
4222 5383 4.729868 ACTCTGGCTACTTCCAAACAAAT 58.270 39.130 0.00 0.00 35.36 2.32
4234 5395 3.552684 GCATCAGATCAGACTCTGGCTAC 60.553 52.174 6.20 0.00 42.42 3.58
4235 5396 2.627221 GCATCAGATCAGACTCTGGCTA 59.373 50.000 6.20 0.00 42.42 3.93
4236 5397 1.413445 GCATCAGATCAGACTCTGGCT 59.587 52.381 6.20 1.90 42.42 4.75
4237 5398 1.138464 TGCATCAGATCAGACTCTGGC 59.862 52.381 6.20 0.83 42.42 4.85
4238 5399 3.755112 ATGCATCAGATCAGACTCTGG 57.245 47.619 6.20 0.00 42.42 3.86
4239 5400 3.248841 GCAATGCATCAGATCAGACTCTG 59.751 47.826 0.00 0.00 43.33 3.35
4240 5401 3.134985 AGCAATGCATCAGATCAGACTCT 59.865 43.478 8.35 0.00 0.00 3.24
4241 5402 3.468770 AGCAATGCATCAGATCAGACTC 58.531 45.455 8.35 0.00 0.00 3.36
4242 5403 3.118371 TGAGCAATGCATCAGATCAGACT 60.118 43.478 13.92 0.00 0.00 3.24
4244 5405 3.553828 TGAGCAATGCATCAGATCAGA 57.446 42.857 13.92 0.00 0.00 3.27
4255 5417 2.599659 GGCTACTTTGTTGAGCAATGC 58.400 47.619 0.00 0.00 37.98 3.56
4268 5430 2.158943 GGCATAGAAGGTTCGGCTACTT 60.159 50.000 0.00 0.00 0.00 2.24
4275 5437 2.548920 GGAGGATGGCATAGAAGGTTCG 60.549 54.545 0.00 0.00 0.00 3.95
4286 5448 1.437397 TATCATGCAGGAGGATGGCA 58.563 50.000 7.33 0.00 43.10 4.92
4287 5449 2.366533 CATATCATGCAGGAGGATGGC 58.633 52.381 7.33 0.00 43.10 4.40
4305 5467 2.094390 GTGCATCAAGTTGACCATGCAT 60.094 45.455 26.83 0.00 40.57 3.96
4319 5481 3.136992 ACCTGGTGATCATATGTGCATCA 59.863 43.478 0.00 7.79 0.00 3.07
4324 5486 3.843893 TGGACCTGGTGATCATATGTG 57.156 47.619 2.82 0.00 0.00 3.21
4331 5493 1.315690 CATGCATGGACCTGGTGATC 58.684 55.000 19.40 0.00 0.00 2.92
4332 5494 0.754217 GCATGCATGGACCTGGTGAT 60.754 55.000 27.34 0.00 0.00 3.06
4334 5496 1.040893 ATGCATGCATGGACCTGGTG 61.041 55.000 31.74 0.94 35.03 4.17
4335 5497 1.308666 ATGCATGCATGGACCTGGT 59.691 52.632 31.74 5.52 35.03 4.00
4336 5498 4.270482 ATGCATGCATGGACCTGG 57.730 55.556 31.74 0.91 35.03 4.45
4353 5525 2.693074 TGAGACTGTGACTAACTGTGCA 59.307 45.455 0.00 0.00 40.69 4.57
4367 5539 4.403752 TGGGATTGTATCTCTGTGAGACTG 59.596 45.833 6.13 0.00 41.76 3.51
4368 5540 4.404073 GTGGGATTGTATCTCTGTGAGACT 59.596 45.833 6.13 0.00 41.76 3.24
4375 5547 4.848357 ACAAAGGTGGGATTGTATCTCTG 58.152 43.478 0.00 0.00 37.96 3.35
4400 5576 2.354604 CCAGCAACCAAAACCAACAACT 60.355 45.455 0.00 0.00 0.00 3.16
4401 5577 2.006169 CCAGCAACCAAAACCAACAAC 58.994 47.619 0.00 0.00 0.00 3.32
4403 5579 0.107945 GCCAGCAACCAAAACCAACA 60.108 50.000 0.00 0.00 0.00 3.33
4404 5580 0.107945 TGCCAGCAACCAAAACCAAC 60.108 50.000 0.00 0.00 0.00 3.77
4406 5582 0.392336 GATGCCAGCAACCAAAACCA 59.608 50.000 0.00 0.00 0.00 3.67
4418 5594 4.644103 AATCGATCAAAAAGGATGCCAG 57.356 40.909 0.00 0.00 0.00 4.85
4424 5600 6.568462 GCTGACAGAAAATCGATCAAAAAGGA 60.568 38.462 6.65 0.00 0.00 3.36
4436 5612 4.036734 TGACTTGTTGGCTGACAGAAAATC 59.963 41.667 6.65 0.00 0.00 2.17
4437 5613 3.953612 TGACTTGTTGGCTGACAGAAAAT 59.046 39.130 6.65 0.00 0.00 1.82
4440 5616 2.288666 GTGACTTGTTGGCTGACAGAA 58.711 47.619 6.65 0.00 0.00 3.02
4452 5628 1.949525 GCAGTTGACCATGTGACTTGT 59.050 47.619 0.00 0.00 0.00 3.16
4454 5630 1.949525 GTGCAGTTGACCATGTGACTT 59.050 47.619 0.00 0.00 0.00 3.01
4456 5632 1.308047 TGTGCAGTTGACCATGTGAC 58.692 50.000 0.00 0.00 0.00 3.67
4489 5671 2.427095 GCTGGGATTATTTGGTGACACC 59.573 50.000 18.28 18.28 42.67 4.16
4491 5673 2.311542 AGGCTGGGATTATTTGGTGACA 59.688 45.455 0.00 0.00 39.83 3.58
4495 5677 5.147767 GGAAATAGGCTGGGATTATTTGGT 58.852 41.667 0.00 0.00 29.67 3.67
4496 5678 4.528206 GGGAAATAGGCTGGGATTATTTGG 59.472 45.833 0.00 0.00 29.67 3.28
4498 5680 5.686535 AGGGAAATAGGCTGGGATTATTT 57.313 39.130 0.00 0.00 31.58 1.40
4500 5682 8.659196 AATATAGGGAAATAGGCTGGGATTAT 57.341 34.615 0.00 0.00 0.00 1.28
4501 5683 8.476829 AAATATAGGGAAATAGGCTGGGATTA 57.523 34.615 0.00 0.00 0.00 1.75
4504 5686 7.182206 GTCTAAATATAGGGAAATAGGCTGGGA 59.818 40.741 0.00 0.00 0.00 4.37
4505 5687 7.037586 TGTCTAAATATAGGGAAATAGGCTGGG 60.038 40.741 0.00 0.00 0.00 4.45
4506 5688 7.918076 TGTCTAAATATAGGGAAATAGGCTGG 58.082 38.462 0.00 0.00 0.00 4.85
4507 5689 9.220767 GTTGTCTAAATATAGGGAAATAGGCTG 57.779 37.037 0.00 0.00 0.00 4.85
4509 5691 9.000486 GTGTTGTCTAAATATAGGGAAATAGGC 58.000 37.037 0.00 0.00 0.00 3.93
4513 5695 9.747898 TTGTGTGTTGTCTAAATATAGGGAAAT 57.252 29.630 0.00 0.00 0.00 2.17
4514 5696 9.226606 CTTGTGTGTTGTCTAAATATAGGGAAA 57.773 33.333 0.00 0.00 0.00 3.13
4515 5697 8.598916 TCTTGTGTGTTGTCTAAATATAGGGAA 58.401 33.333 0.00 0.00 0.00 3.97
4516 5698 8.141298 TCTTGTGTGTTGTCTAAATATAGGGA 57.859 34.615 0.00 0.00 0.00 4.20
4517 5699 7.495934 CCTCTTGTGTGTTGTCTAAATATAGGG 59.504 40.741 0.00 0.00 0.00 3.53
4561 5751 8.492415 AGCCAACCAATATAGTAGAATCTGTA 57.508 34.615 0.00 0.00 0.00 2.74
4569 5759 9.561069 AGTTCATTAAGCCAACCAATATAGTAG 57.439 33.333 0.00 0.00 0.00 2.57
4576 5766 9.030452 TGTATTTAGTTCATTAAGCCAACCAAT 57.970 29.630 0.00 0.00 0.00 3.16
4577 5767 8.410673 TGTATTTAGTTCATTAAGCCAACCAA 57.589 30.769 0.00 0.00 0.00 3.67
4579 5769 8.903820 AGATGTATTTAGTTCATTAAGCCAACC 58.096 33.333 0.00 0.00 0.00 3.77
4598 5789 6.473778 GCGTCGAATATCTGCATTAGATGTAT 59.526 38.462 0.00 0.00 45.66 2.29
4599 5790 5.800438 GCGTCGAATATCTGCATTAGATGTA 59.200 40.000 0.00 0.00 45.66 2.29
4603 5794 3.234386 CGCGTCGAATATCTGCATTAGA 58.766 45.455 0.00 0.00 40.37 2.10
4604 5795 2.222376 GCGCGTCGAATATCTGCATTAG 60.222 50.000 8.43 0.00 0.00 1.73
4609 5800 0.508641 AATGCGCGTCGAATATCTGC 59.491 50.000 8.43 0.00 0.00 4.26
4612 5803 4.370620 AGTTAAATGCGCGTCGAATATC 57.629 40.909 8.43 0.00 0.00 1.63
4623 5814 0.109319 AGCGGCCAAAGTTAAATGCG 60.109 50.000 2.24 0.00 0.00 4.73
4624 5815 2.931512 TAGCGGCCAAAGTTAAATGC 57.068 45.000 2.24 0.00 0.00 3.56
4625 5816 4.743493 ACAATAGCGGCCAAAGTTAAATG 58.257 39.130 2.24 0.00 0.00 2.32
4626 5817 5.400066 AACAATAGCGGCCAAAGTTAAAT 57.600 34.783 2.24 0.00 0.00 1.40
4627 5818 4.857509 AACAATAGCGGCCAAAGTTAAA 57.142 36.364 2.24 0.00 0.00 1.52
4628 5819 4.857509 AAACAATAGCGGCCAAAGTTAA 57.142 36.364 2.24 0.00 0.00 2.01
4629 5820 4.857509 AAAACAATAGCGGCCAAAGTTA 57.142 36.364 2.24 0.00 0.00 2.24
4630 5821 3.744238 AAAACAATAGCGGCCAAAGTT 57.256 38.095 2.24 0.00 0.00 2.66
4631 5822 6.709018 ATATAAAACAATAGCGGCCAAAGT 57.291 33.333 2.24 0.00 0.00 2.66
4632 5823 9.691362 ATTTATATAAAACAATAGCGGCCAAAG 57.309 29.630 11.80 0.00 0.00 2.77
4645 5836 9.757227 GCAAGGCCAACATATTTATATAAAACA 57.243 29.630 11.80 4.03 0.00 2.83
4646 5837 9.757227 TGCAAGGCCAACATATTTATATAAAAC 57.243 29.630 11.80 0.00 0.00 2.43
4652 5843 9.757227 GTATTTTGCAAGGCCAACATATTTATA 57.243 29.630 5.01 0.00 0.00 0.98
4653 5844 8.485392 AGTATTTTGCAAGGCCAACATATTTAT 58.515 29.630 5.01 0.00 0.00 1.40
4654 5845 7.846066 AGTATTTTGCAAGGCCAACATATTTA 58.154 30.769 5.01 0.00 0.00 1.40
4655 5846 6.710278 AGTATTTTGCAAGGCCAACATATTT 58.290 32.000 5.01 0.00 0.00 1.40
4656 5847 6.298441 AGTATTTTGCAAGGCCAACATATT 57.702 33.333 5.01 0.00 0.00 1.28
4657 5848 5.163416 GGAGTATTTTGCAAGGCCAACATAT 60.163 40.000 5.01 0.00 0.00 1.78
4658 5849 4.159506 GGAGTATTTTGCAAGGCCAACATA 59.840 41.667 5.01 0.00 0.00 2.29
4659 5850 3.055891 GGAGTATTTTGCAAGGCCAACAT 60.056 43.478 5.01 0.00 0.00 2.71
4660 5851 2.298729 GGAGTATTTTGCAAGGCCAACA 59.701 45.455 5.01 0.00 0.00 3.33
4661 5852 2.562738 AGGAGTATTTTGCAAGGCCAAC 59.437 45.455 5.01 0.00 0.00 3.77
4662 5853 2.888212 AGGAGTATTTTGCAAGGCCAA 58.112 42.857 5.01 0.00 0.00 4.52
4663 5854 2.603075 AGGAGTATTTTGCAAGGCCA 57.397 45.000 5.01 0.00 0.00 5.36
4664 5855 2.166459 GGAAGGAGTATTTTGCAAGGCC 59.834 50.000 0.00 0.00 0.00 5.19
4665 5856 2.159379 CGGAAGGAGTATTTTGCAAGGC 60.159 50.000 0.00 0.00 0.00 4.35
4666 5857 3.081804 ACGGAAGGAGTATTTTGCAAGG 58.918 45.455 0.00 0.00 0.00 3.61
4667 5858 4.455877 AGAACGGAAGGAGTATTTTGCAAG 59.544 41.667 0.00 0.00 0.00 4.01
4668 5859 4.215399 CAGAACGGAAGGAGTATTTTGCAA 59.785 41.667 0.00 0.00 0.00 4.08
4669 5860 3.751175 CAGAACGGAAGGAGTATTTTGCA 59.249 43.478 0.00 0.00 0.00 4.08
4670 5861 3.751698 ACAGAACGGAAGGAGTATTTTGC 59.248 43.478 0.00 0.00 0.00 3.68
4671 5862 5.941948 AACAGAACGGAAGGAGTATTTTG 57.058 39.130 0.00 0.00 0.00 2.44
4675 5866 8.804204 CCTTATATAACAGAACGGAAGGAGTAT 58.196 37.037 0.00 0.00 35.27 2.12
4676 5867 7.781693 ACCTTATATAACAGAACGGAAGGAGTA 59.218 37.037 4.42 0.00 36.52 2.59
4677 5868 6.610425 ACCTTATATAACAGAACGGAAGGAGT 59.390 38.462 4.42 0.00 36.52 3.85
4678 5869 6.924060 CACCTTATATAACAGAACGGAAGGAG 59.076 42.308 4.42 0.00 36.52 3.69
4679 5870 6.684613 GCACCTTATATAACAGAACGGAAGGA 60.685 42.308 4.42 0.00 36.52 3.36
4680 5871 5.465724 GCACCTTATATAACAGAACGGAAGG 59.534 44.000 3.82 0.00 38.52 3.46
4681 5872 6.046593 TGCACCTTATATAACAGAACGGAAG 58.953 40.000 3.82 0.00 0.00 3.46
4682 5873 5.979993 TGCACCTTATATAACAGAACGGAA 58.020 37.500 3.82 0.00 0.00 4.30
4683 5874 5.601583 TGCACCTTATATAACAGAACGGA 57.398 39.130 3.82 0.00 0.00 4.69
4684 5875 6.861065 AATGCACCTTATATAACAGAACGG 57.139 37.500 0.00 0.00 0.00 4.44
4714 5905 5.904941 ACATGCACTCATTTGACTTTTCAA 58.095 33.333 0.00 0.00 40.14 2.69
4715 5906 5.518848 ACATGCACTCATTTGACTTTTCA 57.481 34.783 0.00 0.00 0.00 2.69
4716 5907 6.642917 CAAACATGCACTCATTTGACTTTTC 58.357 36.000 7.64 0.00 0.00 2.29
4717 5908 5.006941 GCAAACATGCACTCATTTGACTTTT 59.993 36.000 14.59 0.00 34.41 2.27
4718 5909 4.508861 GCAAACATGCACTCATTTGACTTT 59.491 37.500 14.59 0.00 34.41 2.66
4719 5910 4.053295 GCAAACATGCACTCATTTGACTT 58.947 39.130 14.59 0.00 34.41 3.01
4720 5911 3.553508 GGCAAACATGCACTCATTTGACT 60.554 43.478 14.59 0.00 29.75 3.41
4721 5912 2.733026 GGCAAACATGCACTCATTTGAC 59.267 45.455 14.59 9.83 36.33 3.18
4722 5913 2.288948 GGGCAAACATGCACTCATTTGA 60.289 45.455 14.59 0.00 34.89 2.69
4723 5914 2.070783 GGGCAAACATGCACTCATTTG 58.929 47.619 2.97 0.00 34.89 2.32
4724 5915 1.337074 CGGGCAAACATGCACTCATTT 60.337 47.619 1.21 0.00 35.75 2.32
4725 5916 0.244450 CGGGCAAACATGCACTCATT 59.756 50.000 1.21 0.00 35.75 2.57
4726 5917 0.608856 TCGGGCAAACATGCACTCAT 60.609 50.000 1.21 0.00 35.75 2.90
4727 5918 1.228094 TCGGGCAAACATGCACTCA 60.228 52.632 1.21 0.00 35.75 3.41
4728 5919 1.237285 ACTCGGGCAAACATGCACTC 61.237 55.000 1.21 0.00 35.75 3.51
4729 5920 0.823356 AACTCGGGCAAACATGCACT 60.823 50.000 1.21 0.00 35.75 4.40
4730 5921 0.031994 AAACTCGGGCAAACATGCAC 59.968 50.000 2.97 0.00 36.33 4.57
4731 5922 1.610363 TAAACTCGGGCAAACATGCA 58.390 45.000 2.97 0.00 36.33 3.96
4732 5923 2.939460 ATAAACTCGGGCAAACATGC 57.061 45.000 0.00 0.00 0.00 4.06
4733 5924 5.811399 TTCTATAAACTCGGGCAAACATG 57.189 39.130 0.00 0.00 0.00 3.21
4734 5925 6.827586 TTTTCTATAAACTCGGGCAAACAT 57.172 33.333 0.00 0.00 0.00 2.71
4735 5926 6.636562 TTTTTCTATAAACTCGGGCAAACA 57.363 33.333 0.00 0.00 0.00 2.83
4788 5979 9.939802 CTCTTCATGATGGATCAAGTGATATAA 57.060 33.333 8.60 0.00 40.69 0.98
4789 5980 9.097946 ACTCTTCATGATGGATCAAGTGATATA 57.902 33.333 8.60 0.00 40.69 0.86
4790 5981 7.975608 ACTCTTCATGATGGATCAAGTGATAT 58.024 34.615 8.60 0.00 40.69 1.63
4791 5982 7.370905 ACTCTTCATGATGGATCAAGTGATA 57.629 36.000 8.60 0.00 40.69 2.15
4792 5983 6.249911 ACTCTTCATGATGGATCAAGTGAT 57.750 37.500 8.60 0.00 40.69 3.06
4793 5984 5.688814 ACTCTTCATGATGGATCAAGTGA 57.311 39.130 8.60 0.00 40.69 3.41
4794 5985 6.841443 GTACTCTTCATGATGGATCAAGTG 57.159 41.667 8.60 0.00 40.69 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.