Multiple sequence alignment - TraesCS2A01G003600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G003600 chr2A 100.000 6236 0 0 1 6236 2320343 2326578 0.000000e+00 11516.0
1 TraesCS2A01G003600 chr2A 85.380 3167 430 25 1416 4567 2881575 2884723 0.000000e+00 3253.0
2 TraesCS2A01G003600 chr2A 87.129 1111 94 26 4585 5667 2381752 2382841 0.000000e+00 1214.0
3 TraesCS2A01G003600 chr2A 92.105 722 44 8 4565 5282 2491432 2490720 0.000000e+00 1005.0
4 TraesCS2A01G003600 chr2A 85.313 926 85 19 4579 5480 2919111 2920009 0.000000e+00 909.0
5 TraesCS2A01G003600 chr2A 82.255 603 47 28 5174 5739 2490681 2490102 3.400000e-127 466.0
6 TraesCS2A01G003600 chr2A 83.902 205 16 5 5744 5933 2382829 2383031 4.970000e-41 180.0
7 TraesCS2A01G003600 chr2A 96.429 56 1 1 211 265 6753590 6753535 2.390000e-14 91.6
8 TraesCS2A01G003600 chr2A 98.077 52 0 1 211 261 91555021 91554970 8.610000e-14 89.8
9 TraesCS2A01G003600 chr2A 97.917 48 1 0 798 845 775300865 775300818 4.010000e-12 84.2
10 TraesCS2A01G003600 chr2A 95.833 48 2 0 5750 5797 2490117 2490070 1.860000e-10 78.7
11 TraesCS2A01G003600 chr2A 93.182 44 3 0 9 52 2496069 2496026 1.450000e-06 65.8
12 TraesCS2A01G003600 chrUn 89.225 3731 350 23 851 4567 15550307 15553999 0.000000e+00 4615.0
13 TraesCS2A01G003600 chrUn 89.199 3731 348 24 851 4567 241628301 241631990 0.000000e+00 4606.0
14 TraesCS2A01G003600 chrUn 89.059 3729 352 25 853 4567 15774514 15778200 0.000000e+00 4575.0
15 TraesCS2A01G003600 chrUn 85.260 3677 487 27 899 4564 15919276 15915644 0.000000e+00 3736.0
16 TraesCS2A01G003600 chrUn 88.462 1482 147 17 851 2323 381159285 381160751 0.000000e+00 1768.0
17 TraesCS2A01G003600 chrUn 85.536 1687 150 43 4582 6223 15915548 15913911 0.000000e+00 1677.0
18 TraesCS2A01G003600 chrUn 84.802 1691 166 33 4577 6223 364735044 364736687 0.000000e+00 1615.0
19 TraesCS2A01G003600 chrUn 86.433 914 93 15 4577 5465 460309388 460310295 0.000000e+00 972.0
20 TraesCS2A01G003600 chrUn 87.311 859 73 20 4565 5395 15478024 15477174 0.000000e+00 950.0
21 TraesCS2A01G003600 chrUn 85.819 818 103 8 4559 5371 15778270 15779079 0.000000e+00 856.0
22 TraesCS2A01G003600 chrUn 85.819 818 103 8 4559 5371 334804881 334805690 0.000000e+00 856.0
23 TraesCS2A01G003600 chrUn 87.001 677 65 16 853 1521 424221549 424222210 0.000000e+00 741.0
24 TraesCS2A01G003600 chrUn 87.480 639 58 15 851 1481 410124091 410124715 0.000000e+00 717.0
25 TraesCS2A01G003600 chrUn 83.247 770 73 26 5469 6223 418518207 418518935 0.000000e+00 656.0
26 TraesCS2A01G003600 chrUn 82.550 447 50 18 5701 6143 305057201 305057623 9.880000e-98 368.0
27 TraesCS2A01G003600 chrUn 82.550 447 50 18 5701 6143 331986593 331987015 9.880000e-98 368.0
28 TraesCS2A01G003600 chrUn 86.014 286 25 12 5942 6223 15632901 15633175 6.110000e-75 292.0
29 TraesCS2A01G003600 chrUn 85.965 285 25 12 5942 6222 250905931 250906204 2.200000e-74 291.0
30 TraesCS2A01G003600 chrUn 86.170 282 24 12 5945 6222 283169755 283169485 2.200000e-74 291.0
31 TraesCS2A01G003600 chrUn 84.965 286 23 14 5942 6223 15849728 15849997 7.970000e-69 272.0
32 TraesCS2A01G003600 chrUn 83.137 255 38 3 5986 6235 15955512 15955258 1.750000e-55 228.0
33 TraesCS2A01G003600 chr2B 89.199 3731 351 23 851 4567 8385564 8389256 0.000000e+00 4610.0
34 TraesCS2A01G003600 chr2B 83.674 3130 481 25 1442 4559 9100017 9096906 0.000000e+00 2922.0
35 TraesCS2A01G003600 chr2B 85.931 924 113 15 3450 4366 31395272 31394359 0.000000e+00 970.0
36 TraesCS2A01G003600 chr2B 85.819 818 103 8 4559 5371 8389326 8390135 0.000000e+00 856.0
37 TraesCS2A01G003600 chr2B 84.827 837 73 23 5419 6223 9122828 9122014 0.000000e+00 793.0
38 TraesCS2A01G003600 chr2B 83.212 822 129 6 3739 4558 8669872 8670686 0.000000e+00 745.0
39 TraesCS2A01G003600 chr2B 83.871 527 51 23 295 792 8665794 8666315 7.320000e-129 472.0
40 TraesCS2A01G003600 chr2B 88.623 334 33 4 4238 4567 8536860 8537192 9.740000e-108 401.0
41 TraesCS2A01G003600 chr2B 88.644 317 36 0 4250 4566 8997788 8998104 2.730000e-103 387.0
42 TraesCS2A01G003600 chr2B 80.130 463 42 13 5772 6223 8999071 8999494 3.650000e-77 300.0
43 TraesCS2A01G003600 chr2B 86.667 255 28 5 5983 6233 667792348 667792600 1.710000e-70 278.0
44 TraesCS2A01G003600 chr2B 90.404 198 12 3 51 244 8636805 8636611 2.890000e-63 254.0
45 TraesCS2A01G003600 chr2B 90.404 198 12 3 51 244 8665603 8665797 2.890000e-63 254.0
46 TraesCS2A01G003600 chr2B 84.021 194 28 1 4374 4567 8342747 8342937 3.840000e-42 183.0
47 TraesCS2A01G003600 chr2B 100.000 45 0 0 798 842 483448277 483448321 4.010000e-12 84.2
48 TraesCS2A01G003600 chr2D 87.475 3537 397 15 899 4428 2681281 2677784 0.000000e+00 4036.0
49 TraesCS2A01G003600 chr2D 84.475 3240 469 23 1341 4567 22570848 22567630 0.000000e+00 3166.0
50 TraesCS2A01G003600 chr2D 86.364 1298 126 31 4576 5843 22567538 22566262 0.000000e+00 1369.0
51 TraesCS2A01G003600 chr2D 83.912 1094 122 22 4565 5636 2538835 2537774 0.000000e+00 996.0
52 TraesCS2A01G003600 chr4B 85.594 3679 483 28 899 4567 634313215 634316856 0.000000e+00 3814.0
53 TraesCS2A01G003600 chr4B 97.436 39 1 0 804 842 507368725 507368763 4.030000e-07 67.6
54 TraesCS2A01G003600 chr4A 82.523 761 74 25 5413 6143 207380517 207381248 1.150000e-171 614.0
55 TraesCS2A01G003600 chr4A 98.387 62 0 1 211 271 114441246 114441185 2.380000e-19 108.0
56 TraesCS2A01G003600 chr4A 98.077 52 0 1 211 261 531449717 531449666 8.610000e-14 89.8
57 TraesCS2A01G003600 chr4A 100.000 45 0 0 798 842 604718295 604718339 4.010000e-12 84.2
58 TraesCS2A01G003600 chr6A 80.634 284 30 9 5763 6031 599240113 599239840 4.930000e-46 196.0
59 TraesCS2A01G003600 chr6A 96.825 63 1 1 208 269 604175691 604175753 3.070000e-18 104.0
60 TraesCS2A01G003600 chr3B 83.951 162 26 0 4406 4567 52917290 52917129 8.370000e-34 156.0
61 TraesCS2A01G003600 chr7A 98.529 68 0 1 211 277 82814800 82814733 1.100000e-22 119.0
62 TraesCS2A01G003600 chr7A 96.552 58 1 1 211 267 4569920 4569863 1.850000e-15 95.3
63 TraesCS2A01G003600 chr5A 100.000 45 0 0 798 842 675564707 675564751 4.010000e-12 84.2
64 TraesCS2A01G003600 chr4D 95.833 48 2 0 794 841 408569444 408569397 1.860000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G003600 chr2A 2320343 2326578 6235 False 11516.000000 11516 100.000000 1 6236 1 chr2A.!!$F1 6235
1 TraesCS2A01G003600 chr2A 2881575 2884723 3148 False 3253.000000 3253 85.380000 1416 4567 1 chr2A.!!$F2 3151
2 TraesCS2A01G003600 chr2A 2919111 2920009 898 False 909.000000 909 85.313000 4579 5480 1 chr2A.!!$F3 901
3 TraesCS2A01G003600 chr2A 2381752 2383031 1279 False 697.000000 1214 85.515500 4585 5933 2 chr2A.!!$F4 1348
4 TraesCS2A01G003600 chr2A 2490070 2491432 1362 True 516.566667 1005 90.064333 4565 5797 3 chr2A.!!$R5 1232
5 TraesCS2A01G003600 chrUn 15550307 15553999 3692 False 4615.000000 4615 89.225000 851 4567 1 chrUn.!!$F1 3716
6 TraesCS2A01G003600 chrUn 241628301 241631990 3689 False 4606.000000 4606 89.199000 851 4567 1 chrUn.!!$F4 3716
7 TraesCS2A01G003600 chrUn 15774514 15779079 4565 False 2715.500000 4575 87.439000 853 5371 2 chrUn.!!$F15 4518
8 TraesCS2A01G003600 chrUn 15913911 15919276 5365 True 2706.500000 3736 85.398000 899 6223 2 chrUn.!!$R4 5324
9 TraesCS2A01G003600 chrUn 381159285 381160751 1466 False 1768.000000 1768 88.462000 851 2323 1 chrUn.!!$F10 1472
10 TraesCS2A01G003600 chrUn 364735044 364736687 1643 False 1615.000000 1615 84.802000 4577 6223 1 chrUn.!!$F9 1646
11 TraesCS2A01G003600 chrUn 460309388 460310295 907 False 972.000000 972 86.433000 4577 5465 1 chrUn.!!$F14 888
12 TraesCS2A01G003600 chrUn 15477174 15478024 850 True 950.000000 950 87.311000 4565 5395 1 chrUn.!!$R1 830
13 TraesCS2A01G003600 chrUn 334804881 334805690 809 False 856.000000 856 85.819000 4559 5371 1 chrUn.!!$F8 812
14 TraesCS2A01G003600 chrUn 424221549 424222210 661 False 741.000000 741 87.001000 853 1521 1 chrUn.!!$F13 668
15 TraesCS2A01G003600 chrUn 410124091 410124715 624 False 717.000000 717 87.480000 851 1481 1 chrUn.!!$F11 630
16 TraesCS2A01G003600 chrUn 418518207 418518935 728 False 656.000000 656 83.247000 5469 6223 1 chrUn.!!$F12 754
17 TraesCS2A01G003600 chr2B 9096906 9100017 3111 True 2922.000000 2922 83.674000 1442 4559 1 chr2B.!!$R2 3117
18 TraesCS2A01G003600 chr2B 8385564 8390135 4571 False 2733.000000 4610 87.509000 851 5371 2 chr2B.!!$F5 4520
19 TraesCS2A01G003600 chr2B 31394359 31395272 913 True 970.000000 970 85.931000 3450 4366 1 chr2B.!!$R4 916
20 TraesCS2A01G003600 chr2B 9122014 9122828 814 True 793.000000 793 84.827000 5419 6223 1 chr2B.!!$R3 804
21 TraesCS2A01G003600 chr2B 8665603 8670686 5083 False 490.333333 745 85.829000 51 4558 3 chr2B.!!$F6 4507
22 TraesCS2A01G003600 chr2B 8997788 8999494 1706 False 343.500000 387 84.387000 4250 6223 2 chr2B.!!$F7 1973
23 TraesCS2A01G003600 chr2D 2677784 2681281 3497 True 4036.000000 4036 87.475000 899 4428 1 chr2D.!!$R2 3529
24 TraesCS2A01G003600 chr2D 22566262 22570848 4586 True 2267.500000 3166 85.419500 1341 5843 2 chr2D.!!$R3 4502
25 TraesCS2A01G003600 chr2D 2537774 2538835 1061 True 996.000000 996 83.912000 4565 5636 1 chr2D.!!$R1 1071
26 TraesCS2A01G003600 chr4B 634313215 634316856 3641 False 3814.000000 3814 85.594000 899 4567 1 chr4B.!!$F2 3668
27 TraesCS2A01G003600 chr4A 207380517 207381248 731 False 614.000000 614 82.523000 5413 6143 1 chr4A.!!$F1 730

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
643 661 0.169009 GCGACCCAACTCTCATTTGC 59.831 55.000 0.0 0.0 0.00 3.68 F
729 747 0.185175 AAACGCACCCCTTCCTTCTT 59.815 50.000 0.0 0.0 0.00 2.52 F
867 905 0.321387 CATCCATCCCTGCATCCGAG 60.321 60.000 0.0 0.0 0.00 4.63 F
2709 2825 0.462937 CAACCACCCGTCACTTGTCA 60.463 55.000 0.0 0.0 0.00 3.58 F
3412 3534 0.875059 GGAAGCAACGGTTCTTGAGG 59.125 55.000 0.0 0.0 39.61 3.86 F
4082 4912 2.095213 GTCTAGAGACGCTGACACTGAG 59.905 54.545 0.0 0.0 35.12 3.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2034 2150 1.135527 TGAAACCGAGTTGTGACGAGT 59.864 47.619 0.00 0.00 0.00 4.18 R
2680 2796 1.308069 CGGGTGGTTGGCTGAATCTG 61.308 60.000 0.00 0.00 0.00 2.90 R
2830 2946 2.624636 GGCAAAGCCTTCATCCATTTG 58.375 47.619 0.00 0.00 46.69 2.32 R
4059 4889 0.097325 GTGTCAGCGTCTCTAGACCG 59.903 60.000 4.58 3.28 41.86 4.79 R
4446 5283 0.524392 GTGAGTCACGGAGATGAGCG 60.524 60.000 7.68 0.00 0.00 5.03 R
5319 6413 0.837691 AGTCCTGCACAGTGGATGGA 60.838 55.000 1.84 5.96 34.58 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.737838 CTCTCTCGAGCTGTCTGTCT 58.262 55.000 7.81 0.00 0.00 3.41
20 21 2.083774 CTCTCTCGAGCTGTCTGTCTT 58.916 52.381 7.81 0.00 0.00 3.01
21 22 2.080693 TCTCTCGAGCTGTCTGTCTTC 58.919 52.381 7.81 0.00 0.00 2.87
22 23 2.083774 CTCTCGAGCTGTCTGTCTTCT 58.916 52.381 7.81 0.00 0.00 2.85
23 24 2.080693 TCTCGAGCTGTCTGTCTTCTC 58.919 52.381 7.81 0.00 0.00 2.87
24 25 1.132262 CTCGAGCTGTCTGTCTTCTCC 59.868 57.143 0.00 0.00 0.00 3.71
25 26 0.884514 CGAGCTGTCTGTCTTCTCCA 59.115 55.000 0.00 0.00 0.00 3.86
26 27 1.402194 CGAGCTGTCTGTCTTCTCCAC 60.402 57.143 0.00 0.00 0.00 4.02
27 28 0.600557 AGCTGTCTGTCTTCTCCACG 59.399 55.000 0.00 0.00 0.00 4.94
28 29 0.389166 GCTGTCTGTCTTCTCCACGG 60.389 60.000 0.00 0.00 0.00 4.94
29 30 0.389166 CTGTCTGTCTTCTCCACGGC 60.389 60.000 0.00 0.00 0.00 5.68
30 31 1.079750 GTCTGTCTTCTCCACGGCC 60.080 63.158 0.00 0.00 0.00 6.13
31 32 2.125912 CTGTCTTCTCCACGGCCG 60.126 66.667 26.86 26.86 0.00 6.13
32 33 3.649277 CTGTCTTCTCCACGGCCGG 62.649 68.421 31.76 18.27 0.00 6.13
59 60 2.508887 GCTCTGCACTGCTCTCCG 60.509 66.667 1.98 0.00 0.00 4.63
118 119 1.963338 GCCAACGCAGCTCACTTCT 60.963 57.895 0.00 0.00 34.03 2.85
125 126 0.612744 GCAGCTCACTTCTCCTCCTT 59.387 55.000 0.00 0.00 0.00 3.36
127 128 1.206849 CAGCTCACTTCTCCTCCTTCC 59.793 57.143 0.00 0.00 0.00 3.46
151 152 0.802607 GACGCAACTCCGGTCATCTC 60.803 60.000 0.00 0.00 0.00 2.75
158 159 3.917760 CCGGTCATCTCGCCCTCC 61.918 72.222 0.00 0.00 0.00 4.30
164 165 3.083997 ATCTCGCCCTCCCACCAC 61.084 66.667 0.00 0.00 0.00 4.16
242 247 1.153469 GCAGCAGGTCAGTAGCCTC 60.153 63.158 0.00 0.00 33.31 4.70
243 248 1.612395 GCAGCAGGTCAGTAGCCTCT 61.612 60.000 0.00 0.00 33.31 3.69
244 249 0.459489 CAGCAGGTCAGTAGCCTCTC 59.541 60.000 0.00 0.00 33.31 3.20
245 250 0.334676 AGCAGGTCAGTAGCCTCTCT 59.665 55.000 0.00 0.00 33.31 3.10
246 251 0.744281 GCAGGTCAGTAGCCTCTCTC 59.256 60.000 0.00 0.00 33.31 3.20
247 252 1.684869 GCAGGTCAGTAGCCTCTCTCT 60.685 57.143 0.00 0.00 33.31 3.10
248 253 2.297701 CAGGTCAGTAGCCTCTCTCTC 58.702 57.143 0.00 0.00 33.31 3.20
249 254 2.092429 CAGGTCAGTAGCCTCTCTCTCT 60.092 54.545 0.00 0.00 33.31 3.10
250 255 2.172717 AGGTCAGTAGCCTCTCTCTCTC 59.827 54.545 0.00 0.00 0.00 3.20
251 256 2.172717 GGTCAGTAGCCTCTCTCTCTCT 59.827 54.545 0.00 0.00 0.00 3.10
252 257 3.467803 GTCAGTAGCCTCTCTCTCTCTC 58.532 54.545 0.00 0.00 0.00 3.20
253 258 3.134804 GTCAGTAGCCTCTCTCTCTCTCT 59.865 52.174 0.00 0.00 0.00 3.10
254 259 3.388024 TCAGTAGCCTCTCTCTCTCTCTC 59.612 52.174 0.00 0.00 0.00 3.20
255 260 3.389329 CAGTAGCCTCTCTCTCTCTCTCT 59.611 52.174 0.00 0.00 0.00 3.10
256 261 3.643792 AGTAGCCTCTCTCTCTCTCTCTC 59.356 52.174 0.00 0.00 0.00 3.20
257 262 2.769209 AGCCTCTCTCTCTCTCTCTCT 58.231 52.381 0.00 0.00 0.00 3.10
258 263 2.703007 AGCCTCTCTCTCTCTCTCTCTC 59.297 54.545 0.00 0.00 0.00 3.20
259 264 2.703007 GCCTCTCTCTCTCTCTCTCTCT 59.297 54.545 0.00 0.00 0.00 3.10
260 265 3.244044 GCCTCTCTCTCTCTCTCTCTCTC 60.244 56.522 0.00 0.00 0.00 3.20
261 266 4.222336 CCTCTCTCTCTCTCTCTCTCTCT 58.778 52.174 0.00 0.00 0.00 3.10
262 267 4.280677 CCTCTCTCTCTCTCTCTCTCTCTC 59.719 54.167 0.00 0.00 0.00 3.20
263 268 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
264 269 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
265 270 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
266 271 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
267 272 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
268 273 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
269 274 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
270 275 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
271 276 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
272 277 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
273 278 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
274 279 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
275 280 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
276 281 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
277 282 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
278 283 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
279 284 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
280 285 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
281 286 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
282 287 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
283 288 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
284 289 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
285 290 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
286 291 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
287 292 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
288 293 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
289 294 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
290 295 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
291 296 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
292 297 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
293 298 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
294 299 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
295 300 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
311 316 1.824852 TCTCTCTGTGTGTGTGTGTGT 59.175 47.619 0.00 0.00 0.00 3.72
312 317 1.929169 CTCTCTGTGTGTGTGTGTGTG 59.071 52.381 0.00 0.00 0.00 3.82
313 318 1.275010 TCTCTGTGTGTGTGTGTGTGT 59.725 47.619 0.00 0.00 0.00 3.72
315 320 1.155889 CTGTGTGTGTGTGTGTGTGT 58.844 50.000 0.00 0.00 0.00 3.72
320 325 3.858989 TGTGTGTGTGTGTGCGCG 61.859 61.111 0.00 0.00 0.00 6.86
341 346 2.507484 CTGTTTCAGTGCCTCCATTCA 58.493 47.619 0.00 0.00 0.00 2.57
386 392 1.074167 ACCCAACCCCCATTTGCAA 60.074 52.632 0.00 0.00 0.00 4.08
397 403 2.684881 CCCATTTGCAACAGCTAGGTAG 59.315 50.000 0.00 0.00 0.00 3.18
401 407 1.521681 GCAACAGCTAGGTAGGCGG 60.522 63.158 0.00 0.00 34.52 6.13
441 456 4.147701 GAAGGCATCCATCACCGG 57.852 61.111 0.00 0.00 0.00 5.28
443 458 4.552365 AGGCATCCATCACCGGCG 62.552 66.667 0.00 0.00 0.00 6.46
461 476 2.040544 GGACCTCCGACGAACCGTA 61.041 63.158 0.00 0.00 41.37 4.02
466 481 1.580845 CTCCGACGAACCGTACCACT 61.581 60.000 0.00 0.00 41.37 4.00
497 512 3.567478 AGCAGGTCAGAGTTCTGTTTT 57.433 42.857 8.85 0.00 44.12 2.43
499 514 3.879892 AGCAGGTCAGAGTTCTGTTTTTC 59.120 43.478 8.85 0.00 44.12 2.29
520 537 6.627087 TTCTTCTCTCTCTCTCTCTCTCTT 57.373 41.667 0.00 0.00 0.00 2.85
528 545 8.033178 TCTCTCTCTCTCTCTCTTATGATTGA 57.967 38.462 0.00 0.00 0.00 2.57
556 573 4.584325 TCTGTTTCCCCTTGTGATTGAAAG 59.416 41.667 0.00 0.00 0.00 2.62
558 575 4.714308 TGTTTCCCCTTGTGATTGAAAGTT 59.286 37.500 0.00 0.00 0.00 2.66
559 576 5.163457 TGTTTCCCCTTGTGATTGAAAGTTC 60.163 40.000 0.00 0.00 0.00 3.01
615 632 1.347062 TGAAAATTCCCAACAGGCCC 58.653 50.000 0.00 0.00 34.51 5.80
634 651 2.281070 CTGTGCTGCGACCCAACT 60.281 61.111 0.00 0.00 0.00 3.16
636 653 2.031163 GTGCTGCGACCCAACTCT 59.969 61.111 0.00 0.00 0.00 3.24
643 661 0.169009 GCGACCCAACTCTCATTTGC 59.831 55.000 0.00 0.00 0.00 3.68
648 666 1.201647 CCCAACTCTCATTTGCAGCAG 59.798 52.381 0.00 0.00 0.00 4.24
655 673 2.501316 TCTCATTTGCAGCAGCTAGGTA 59.499 45.455 1.76 0.00 42.74 3.08
668 686 3.106738 TAGGTACTAGGCAGACGGC 57.893 57.895 0.00 0.00 41.75 5.68
669 687 0.256752 TAGGTACTAGGCAGACGGCA 59.743 55.000 0.00 0.00 42.74 5.69
670 688 1.321074 AGGTACTAGGCAGACGGCAC 61.321 60.000 0.00 0.00 41.11 5.01
705 723 4.382320 GCCGGCAGGACCAACGTA 62.382 66.667 24.80 0.00 41.02 3.57
706 724 2.433664 CCGGCAGGACCAACGTAC 60.434 66.667 0.00 0.00 41.02 3.67
707 725 2.654877 CGGCAGGACCAACGTACT 59.345 61.111 0.00 0.00 39.03 2.73
708 726 1.597797 CCGGCAGGACCAACGTACTA 61.598 60.000 0.00 0.00 41.02 1.82
709 727 0.458669 CGGCAGGACCAACGTACTAT 59.541 55.000 0.00 0.00 39.03 2.12
711 729 2.099592 CGGCAGGACCAACGTACTATAA 59.900 50.000 0.00 0.00 39.03 0.98
712 730 3.429272 CGGCAGGACCAACGTACTATAAA 60.429 47.826 0.00 0.00 39.03 1.40
713 731 3.867493 GGCAGGACCAACGTACTATAAAC 59.133 47.826 0.00 0.00 38.86 2.01
714 732 3.549070 GCAGGACCAACGTACTATAAACG 59.451 47.826 0.00 5.90 45.64 3.60
716 734 3.193267 AGGACCAACGTACTATAAACGCA 59.807 43.478 7.09 0.00 44.04 5.24
718 736 3.253230 ACCAACGTACTATAAACGCACC 58.747 45.455 7.09 0.00 44.04 5.01
719 737 2.604462 CCAACGTACTATAAACGCACCC 59.396 50.000 7.09 0.00 44.04 4.61
721 739 2.102578 ACGTACTATAAACGCACCCCT 58.897 47.619 7.09 0.00 44.04 4.79
722 740 2.497273 ACGTACTATAAACGCACCCCTT 59.503 45.455 7.09 0.00 44.04 3.95
724 742 2.704464 ACTATAAACGCACCCCTTCC 57.296 50.000 0.00 0.00 0.00 3.46
725 743 2.193993 ACTATAAACGCACCCCTTCCT 58.806 47.619 0.00 0.00 0.00 3.36
726 744 2.574824 ACTATAAACGCACCCCTTCCTT 59.425 45.455 0.00 0.00 0.00 3.36
727 745 2.124277 ATAAACGCACCCCTTCCTTC 57.876 50.000 0.00 0.00 0.00 3.46
729 747 0.185175 AAACGCACCCCTTCCTTCTT 59.815 50.000 0.00 0.00 0.00 2.52
744 781 4.806330 TCCTTCTTCAGTTTACAGCTACG 58.194 43.478 0.00 0.00 0.00 3.51
745 782 3.927142 CCTTCTTCAGTTTACAGCTACGG 59.073 47.826 0.00 0.00 0.00 4.02
760 798 2.033151 GCTACGGGCAGCTATTTTTACG 60.033 50.000 0.00 0.00 41.35 3.18
764 802 2.536130 CGGGCAGCTATTTTTACGAACG 60.536 50.000 0.00 0.00 0.00 3.95
792 830 2.219080 TTGATTCTTGGATGCAGGCA 57.781 45.000 0.00 0.00 0.00 4.75
793 831 2.219080 TGATTCTTGGATGCAGGCAA 57.781 45.000 0.00 0.00 0.00 4.52
794 832 2.097036 TGATTCTTGGATGCAGGCAAG 58.903 47.619 0.00 0.00 0.00 4.01
795 833 1.407979 GATTCTTGGATGCAGGCAAGG 59.592 52.381 0.00 0.00 0.00 3.61
796 834 1.252904 TTCTTGGATGCAGGCAAGGC 61.253 55.000 0.00 0.00 0.00 4.35
797 835 1.980232 CTTGGATGCAGGCAAGGCA 60.980 57.895 0.00 1.09 46.66 4.75
798 836 1.533513 TTGGATGCAGGCAAGGCAA 60.534 52.632 0.00 0.00 45.60 4.52
799 837 1.818959 TTGGATGCAGGCAAGGCAAC 61.819 55.000 0.00 0.70 45.60 4.17
800 838 2.575461 GATGCAGGCAAGGCAACC 59.425 61.111 0.00 0.00 45.60 3.77
801 839 2.999063 ATGCAGGCAAGGCAACCC 60.999 61.111 0.00 0.00 45.60 4.11
802 840 3.534704 ATGCAGGCAAGGCAACCCT 62.535 57.895 0.00 0.00 45.60 4.34
803 841 3.688159 GCAGGCAAGGCAACCCTG 61.688 66.667 11.52 11.52 46.95 4.45
804 842 2.993264 CAGGCAAGGCAACCCTGG 60.993 66.667 8.84 0.00 41.90 4.45
805 843 4.305956 AGGCAAGGCAACCCTGGG 62.306 66.667 12.28 12.28 41.90 4.45
806 844 4.299796 GGCAAGGCAACCCTGGGA 62.300 66.667 22.23 0.00 41.90 4.37
807 845 2.203625 GCAAGGCAACCCTGGGAA 60.204 61.111 22.23 0.00 41.90 3.97
808 846 1.610379 GCAAGGCAACCCTGGGAAT 60.610 57.895 22.23 4.66 41.90 3.01
809 847 0.324275 GCAAGGCAACCCTGGGAATA 60.324 55.000 22.23 0.00 41.90 1.75
810 848 1.767759 CAAGGCAACCCTGGGAATAG 58.232 55.000 22.23 6.92 41.90 1.73
811 849 1.005924 CAAGGCAACCCTGGGAATAGT 59.994 52.381 22.23 0.00 41.90 2.12
812 850 1.382914 AGGCAACCCTGGGAATAGTT 58.617 50.000 22.23 0.00 40.94 2.24
813 851 1.716503 AGGCAACCCTGGGAATAGTTT 59.283 47.619 22.23 0.00 40.94 2.66
814 852 2.100197 GGCAACCCTGGGAATAGTTTC 58.900 52.381 22.23 0.00 0.00 2.78
815 853 2.556559 GGCAACCCTGGGAATAGTTTCA 60.557 50.000 22.23 0.00 33.23 2.69
816 854 3.161866 GCAACCCTGGGAATAGTTTCAA 58.838 45.455 22.23 0.00 33.23 2.69
817 855 3.576550 GCAACCCTGGGAATAGTTTCAAA 59.423 43.478 22.23 0.00 33.23 2.69
818 856 4.222810 GCAACCCTGGGAATAGTTTCAAAT 59.777 41.667 22.23 0.00 33.23 2.32
819 857 5.624509 GCAACCCTGGGAATAGTTTCAAATC 60.625 44.000 22.23 0.00 33.23 2.17
820 858 4.610333 ACCCTGGGAATAGTTTCAAATCC 58.390 43.478 22.23 0.00 33.23 3.01
821 859 4.045334 ACCCTGGGAATAGTTTCAAATCCA 59.955 41.667 22.23 0.00 33.23 3.41
822 860 4.646492 CCCTGGGAATAGTTTCAAATCCAG 59.354 45.833 7.01 0.00 37.34 3.86
823 861 5.509498 CCTGGGAATAGTTTCAAATCCAGA 58.491 41.667 0.00 0.00 38.69 3.86
824 862 6.131961 CCTGGGAATAGTTTCAAATCCAGAT 58.868 40.000 0.00 0.00 38.69 2.90
825 863 6.608808 CCTGGGAATAGTTTCAAATCCAGATT 59.391 38.462 0.00 0.00 38.69 2.40
826 864 7.408756 TGGGAATAGTTTCAAATCCAGATTG 57.591 36.000 0.00 0.00 33.23 2.67
827 865 7.181361 TGGGAATAGTTTCAAATCCAGATTGA 58.819 34.615 0.00 0.00 33.23 2.57
828 866 7.673504 TGGGAATAGTTTCAAATCCAGATTGAA 59.326 33.333 0.00 0.00 33.23 2.69
829 867 8.531146 GGGAATAGTTTCAAATCCAGATTGAAA 58.469 33.333 9.63 9.63 33.23 2.69
830 868 9.358872 GGAATAGTTTCAAATCCAGATTGAAAC 57.641 33.333 25.78 25.78 41.86 2.78
831 869 9.358872 GAATAGTTTCAAATCCAGATTGAAACC 57.641 33.333 27.79 16.29 42.11 3.27
832 870 6.729690 AGTTTCAAATCCAGATTGAAACCA 57.270 33.333 27.79 5.03 42.11 3.67
833 871 6.752168 AGTTTCAAATCCAGATTGAAACCAG 58.248 36.000 27.79 1.73 42.11 4.00
834 872 5.726980 TTCAAATCCAGATTGAAACCAGG 57.273 39.130 0.00 0.00 0.00 4.45
835 873 3.511146 TCAAATCCAGATTGAAACCAGGC 59.489 43.478 0.00 0.00 0.00 4.85
836 874 2.149973 ATCCAGATTGAAACCAGGCC 57.850 50.000 0.00 0.00 0.00 5.19
837 875 0.776810 TCCAGATTGAAACCAGGCCA 59.223 50.000 5.01 0.00 0.00 5.36
838 876 1.146774 TCCAGATTGAAACCAGGCCAA 59.853 47.619 5.01 0.00 0.00 4.52
839 877 1.969923 CCAGATTGAAACCAGGCCAAA 59.030 47.619 5.01 0.00 0.00 3.28
844 882 2.123468 AAACCAGGCCAAACCGCT 60.123 55.556 5.01 0.00 46.52 5.52
849 887 4.892965 AGGCCAAACCGCTGCACA 62.893 61.111 5.01 0.00 46.52 4.57
864 902 1.177256 GCACATCCATCCCTGCATCC 61.177 60.000 0.00 0.00 0.00 3.51
866 904 1.056125 ACATCCATCCCTGCATCCGA 61.056 55.000 0.00 0.00 0.00 4.55
867 905 0.321387 CATCCATCCCTGCATCCGAG 60.321 60.000 0.00 0.00 0.00 4.63
1122 1160 0.610232 ACAATGCCCAGGACTTGCTC 60.610 55.000 0.00 0.00 0.00 4.26
1123 1161 0.609957 CAATGCCCAGGACTTGCTCA 60.610 55.000 0.00 0.00 0.00 4.26
1153 1191 0.527817 CTACTTCCGCATCCACGACC 60.528 60.000 0.00 0.00 34.06 4.79
1294 1404 3.854459 GTGCTAAGCGCCGACAGC 61.854 66.667 2.29 8.56 38.05 4.40
1295 1405 4.371590 TGCTAAGCGCCGACAGCA 62.372 61.111 16.03 16.03 44.04 4.41
1296 1406 3.558411 GCTAAGCGCCGACAGCAG 61.558 66.667 2.29 0.00 44.04 4.24
1299 1409 2.271607 CTAAGCGCCGACAGCAGAGA 62.272 60.000 2.29 0.00 44.04 3.10
1377 1490 1.993369 GCATGCCCAAGCTCGGTAAC 61.993 60.000 6.36 0.00 40.80 2.50
1463 1579 6.136541 AGAAACACCAAAGCTTGAGTTTAG 57.863 37.500 14.70 2.59 38.15 1.85
1464 1580 3.990318 ACACCAAAGCTTGAGTTTAGC 57.010 42.857 0.00 0.00 38.93 3.09
1491 1607 7.506938 AGGGTTGATTTCTCTCAAAAGATCAAA 59.493 33.333 0.00 0.00 36.92 2.69
1503 1619 7.542477 TCTCAAAAGATCAAAGACATCGTAGAC 59.458 37.037 0.00 0.00 42.51 2.59
1509 1625 7.827701 AGATCAAAGACATCGTAGACAAACTA 58.172 34.615 0.00 0.00 42.51 2.24
1623 1739 4.394920 GGTCGAATTGATGAGCCAAAACTA 59.605 41.667 0.00 0.00 0.00 2.24
1629 1745 7.255242 CGAATTGATGAGCCAAAACTATATGGT 60.255 37.037 0.00 0.00 39.00 3.55
1686 1802 3.587061 TCACCAAGGGTCAATACTGTGAT 59.413 43.478 0.00 0.00 31.02 3.06
1773 1889 4.749598 CACATATATCGCAGCCAACAAGTA 59.250 41.667 0.00 0.00 0.00 2.24
1775 1891 3.543680 ATATCGCAGCCAACAAGTACT 57.456 42.857 0.00 0.00 0.00 2.73
1779 1895 0.875059 GCAGCCAACAAGTACTGGAC 59.125 55.000 3.64 0.00 34.35 4.02
1823 1939 5.050499 GGATATGTGTCTCGCTCAATTTCAG 60.050 44.000 0.00 0.00 0.00 3.02
1881 1997 8.405531 TGTACCTCTGAAGTTGAAAATGAAAAG 58.594 33.333 0.00 0.00 0.00 2.27
1896 2012 5.948992 ATGAAAAGAAGAGCAGTACAACC 57.051 39.130 0.00 0.00 0.00 3.77
1986 2102 0.466922 GCAATGAGGATGACTGGGGG 60.467 60.000 0.00 0.00 0.00 5.40
1996 2112 3.321968 GGATGACTGGGGGAAATTATTGC 59.678 47.826 0.00 0.00 0.00 3.56
2022 2138 9.903682 CTGACACTCAATAAATCACAAGAAAAT 57.096 29.630 0.00 0.00 0.00 1.82
2034 2150 7.959658 ATCACAAGAAAATGGTTCCATGATA 57.040 32.000 5.02 0.00 0.00 2.15
2063 2179 4.024048 CACAACTCGGTTTCAAGCAATAGT 60.024 41.667 0.00 0.00 0.00 2.12
2085 2201 4.439253 AGAGAAGGTTAAAGCAACTGGT 57.561 40.909 0.00 0.00 37.30 4.00
2121 2237 6.410540 ACTGGATGGTTTAGAATCTGAAGAC 58.589 40.000 0.00 0.00 0.00 3.01
2157 2273 9.959749 TTATTTCTTACATTTGTCTTTGGTGAC 57.040 29.630 0.00 0.00 37.47 3.67
2250 2366 1.480205 CTCTTGCAGCAAAAACGGTG 58.520 50.000 9.65 0.00 37.45 4.94
2265 2381 1.755380 ACGGTGGGTAGATTACTGAGC 59.245 52.381 0.00 0.00 0.00 4.26
2451 2567 4.883083 ACAATTTCAGAAGTGACGAGCTA 58.117 39.130 0.00 0.00 35.02 3.32
2503 2619 0.472044 ACCCAATGGCCAAAACCAAC 59.528 50.000 10.96 0.00 44.65 3.77
2542 2658 8.045176 AGGTCTGAGCAATTTAAATGAGTTAC 57.955 34.615 9.78 0.00 0.00 2.50
2577 2693 8.288913 GGATTTTTCAGAGAAGAGAAAACTGAG 58.711 37.037 0.00 0.00 41.77 3.35
2604 2720 5.163571 TGGTTTGCGTTATGTTATGCATGAT 60.164 36.000 10.16 1.14 39.60 2.45
2638 2754 2.250031 TGGCATTGAAGGTTGCATCTT 58.750 42.857 2.92 2.92 40.66 2.40
2655 2771 9.846248 GTTGCATCTTATGATTGTCTTAGTTTT 57.154 29.630 0.00 0.00 0.00 2.43
2680 2796 4.098196 GTCTCCCTAGTGTTGGATCAGTAC 59.902 50.000 0.00 0.00 0.00 2.73
2709 2825 0.462937 CAACCACCCGTCACTTGTCA 60.463 55.000 0.00 0.00 0.00 3.58
2720 2836 4.397382 CGTCACTTGTCAATAAGCACATG 58.603 43.478 0.00 0.00 0.00 3.21
2844 2960 3.959535 TTTGGACAAATGGATGAAGGC 57.040 42.857 0.00 0.00 0.00 4.35
2869 2985 7.548780 GCTTTGCCAAGATATTTGGTGATTTTA 59.451 33.333 0.86 0.00 41.53 1.52
2973 3089 4.064388 GACTACTCCACCTACGATACCTC 58.936 52.174 0.00 0.00 0.00 3.85
2976 3092 1.609555 CTCCACCTACGATACCTCTGC 59.390 57.143 0.00 0.00 0.00 4.26
2984 3100 1.202952 ACGATACCTCTGCCTAGGGAG 60.203 57.143 23.73 23.73 41.32 4.30
3013 3129 2.756760 AGCCAGATGCATTTACCACTTG 59.243 45.455 0.00 0.00 44.83 3.16
3021 3137 2.099756 GCATTTACCACTTGGCATCTCC 59.900 50.000 0.00 0.00 39.32 3.71
3226 3348 8.754080 TCAATAAAAGAAGTGAAGGGTTTGAAA 58.246 29.630 0.00 0.00 0.00 2.69
3307 3429 6.477053 AGATAGATACAGCAGAAGAAGCAA 57.523 37.500 0.00 0.00 0.00 3.91
3412 3534 0.875059 GGAAGCAACGGTTCTTGAGG 59.125 55.000 0.00 0.00 39.61 3.86
3696 3818 9.996554 CTAGGAAGTTTTGAAAAATGGGTTTAT 57.003 29.630 0.00 0.00 0.00 1.40
3796 4626 4.020039 TGGTTATTAGAGAGTGCCCGAAAA 60.020 41.667 0.00 0.00 0.00 2.29
3934 4764 3.121328 CGAAAGTAAGCGTTCTGTCACTG 60.121 47.826 0.00 0.00 32.23 3.66
3983 4813 6.624423 AGTTTGCATACTCAAAATCATCCAC 58.376 36.000 3.73 0.00 37.65 4.02
3991 4821 3.084039 TCAAAATCATCCACTGGAGCAC 58.916 45.455 3.62 0.00 34.05 4.40
4070 4900 6.205101 TGATAAAGAAACCGGTCTAGAGAC 57.795 41.667 8.04 0.75 44.04 3.36
4082 4912 2.095213 GTCTAGAGACGCTGACACTGAG 59.905 54.545 0.00 0.00 35.12 3.35
4241 5071 5.986135 AGTGTATCAAGATCGATGGCTTAAC 59.014 40.000 0.54 1.58 0.00 2.01
4372 5202 3.523606 TGCAACAAACAGCACAAGAAT 57.476 38.095 0.00 0.00 35.51 2.40
4456 5293 1.745264 CTCTTCCCCGCTCATCTCC 59.255 63.158 0.00 0.00 0.00 3.71
4560 5400 2.576298 GCTCCAAGCCTTGCAATCT 58.424 52.632 0.00 0.00 34.48 2.40
4572 5495 4.836825 CCTTGCAATCTCTCCAGTTTCTA 58.163 43.478 0.00 0.00 0.00 2.10
4776 5699 2.221918 GGATCCCAATCCCAGACGT 58.778 57.895 0.00 0.00 45.11 4.34
4799 5722 1.661463 TTGGAAGATGCTGAGGGAGT 58.339 50.000 0.00 0.00 0.00 3.85
5018 5941 4.563786 CCTCCAGGAACTAGAGTTTTGGTC 60.564 50.000 18.65 0.17 42.60 4.02
5165 6091 3.156293 AGCTAAATGTCACATGGTGCAA 58.844 40.909 10.49 0.00 32.98 4.08
5170 6096 1.467920 TGTCACATGGTGCAACAACA 58.532 45.000 9.38 5.54 39.98 3.33
5171 6097 1.404748 TGTCACATGGTGCAACAACAG 59.595 47.619 9.38 4.36 39.98 3.16
5229 6155 7.039714 GGAACCATCCCCAAAATCATAATAGAC 60.040 40.741 0.00 0.00 40.10 2.59
5230 6156 7.166758 ACCATCCCCAAAATCATAATAGACT 57.833 36.000 0.00 0.00 0.00 3.24
5231 6157 7.595488 ACCATCCCCAAAATCATAATAGACTT 58.405 34.615 0.00 0.00 0.00 3.01
5285 6241 3.621268 GTGTTTTTCCACTTTGCCCTTTC 59.379 43.478 0.00 0.00 32.50 2.62
5289 6245 0.560688 TCCACTTTGCCCTTTCCCTT 59.439 50.000 0.00 0.00 0.00 3.95
5293 6249 2.433970 CACTTTGCCCTTTCCCTTCAAA 59.566 45.455 0.00 0.00 0.00 2.69
5295 6251 2.166907 TTGCCCTTTCCCTTCAAACA 57.833 45.000 0.00 0.00 0.00 2.83
5297 6253 1.342474 TGCCCTTTCCCTTCAAACACA 60.342 47.619 0.00 0.00 0.00 3.72
5298 6254 1.760029 GCCCTTTCCCTTCAAACACAA 59.240 47.619 0.00 0.00 0.00 3.33
5300 6256 2.224042 CCCTTTCCCTTCAAACACAAGC 60.224 50.000 0.00 0.00 0.00 4.01
5302 6258 3.132824 CCTTTCCCTTCAAACACAAGCTT 59.867 43.478 0.00 0.00 0.00 3.74
5303 6259 4.340950 CCTTTCCCTTCAAACACAAGCTTA 59.659 41.667 0.00 0.00 0.00 3.09
5304 6260 5.163457 CCTTTCCCTTCAAACACAAGCTTAA 60.163 40.000 0.00 0.00 0.00 1.85
5306 6262 7.255801 CCTTTCCCTTCAAACACAAGCTTAATA 60.256 37.037 0.00 0.00 0.00 0.98
5310 6404 7.040686 TCCCTTCAAACACAAGCTTAATAACTC 60.041 37.037 0.00 0.00 0.00 3.01
5319 6413 8.466798 ACACAAGCTTAATAACTCTGTTTGTTT 58.533 29.630 0.00 0.00 31.63 2.83
5341 6435 1.827344 CATCCACTGTGCAGGACTCTA 59.173 52.381 1.29 0.00 36.60 2.43
5343 6437 1.203063 TCCACTGTGCAGGACTCTACT 60.203 52.381 1.29 0.00 0.00 2.57
5432 6554 0.980423 GTGGCTCTGGTCTTCCTTCT 59.020 55.000 0.00 0.00 34.23 2.85
5446 6569 8.437575 TGGTCTTCCTTCTTGTACTTAAATCTT 58.562 33.333 0.00 0.00 34.23 2.40
5480 6607 6.688578 TCTAAACTGTTTACTCCTGCTGTAG 58.311 40.000 8.84 0.00 0.00 2.74
5508 6645 1.228245 AACGTGTGCTGATTGGCCT 60.228 52.632 3.32 0.00 0.00 5.19
5648 6807 4.072131 GGTGGAAGCAAAGTAGATGTGAA 58.928 43.478 0.00 0.00 0.00 3.18
5655 6814 5.486526 AGCAAAGTAGATGTGAAAGGAGAG 58.513 41.667 0.00 0.00 0.00 3.20
5674 6833 3.117360 AGAGGCAGAAAATAAGATGGGGG 60.117 47.826 0.00 0.00 0.00 5.40
5679 6838 5.423931 GGCAGAAAATAAGATGGGGGTTAAA 59.576 40.000 0.00 0.00 0.00 1.52
5736 6898 4.786425 AGACTTCTCAGCACCTTTCTTTT 58.214 39.130 0.00 0.00 0.00 2.27
5737 6899 4.578105 AGACTTCTCAGCACCTTTCTTTTG 59.422 41.667 0.00 0.00 0.00 2.44
5738 6900 4.526970 ACTTCTCAGCACCTTTCTTTTGA 58.473 39.130 0.00 0.00 0.00 2.69
5739 6901 5.136105 ACTTCTCAGCACCTTTCTTTTGAT 58.864 37.500 0.00 0.00 0.00 2.57
5740 6902 5.595952 ACTTCTCAGCACCTTTCTTTTGATT 59.404 36.000 0.00 0.00 0.00 2.57
5741 6903 5.695851 TCTCAGCACCTTTCTTTTGATTC 57.304 39.130 0.00 0.00 0.00 2.52
5744 6906 6.096705 TCTCAGCACCTTTCTTTTGATTCAAA 59.903 34.615 7.74 7.74 0.00 2.69
5745 6907 6.275335 TCAGCACCTTTCTTTTGATTCAAAG 58.725 36.000 11.41 6.99 34.72 2.77
5746 6908 5.050567 CAGCACCTTTCTTTTGATTCAAAGC 60.051 40.000 11.41 9.14 34.72 3.51
5747 6909 4.810491 GCACCTTTCTTTTGATTCAAAGCA 59.190 37.500 11.41 0.80 34.72 3.91
5757 6919 6.831727 TTTGATTCAAAGCAGAACAACATG 57.168 33.333 7.74 0.00 0.00 3.21
5832 7009 3.870299 GCCTTTACTTAGCTGCAGGAACT 60.870 47.826 17.12 6.71 43.88 3.01
5924 7108 5.525378 CACTTTTACTCCAGCCATATCAGAC 59.475 44.000 0.00 0.00 0.00 3.51
5929 7113 3.387374 ACTCCAGCCATATCAGACTTCTG 59.613 47.826 0.00 0.00 45.08 3.02
5943 7130 6.406370 TCAGACTTCTGTTTTCTTCTCAACA 58.594 36.000 6.15 0.00 44.12 3.33
5949 7136 8.202745 CTTCTGTTTTCTTCTCAACAGTAGTT 57.797 34.615 10.90 0.00 46.76 2.24
5950 7137 9.314321 CTTCTGTTTTCTTCTCAACAGTAGTTA 57.686 33.333 10.90 0.00 46.76 2.24
6057 7255 4.650734 CAAGCCTCTCTTCTTTTCTTCCT 58.349 43.478 0.00 0.00 31.27 3.36
6059 7257 5.675684 AGCCTCTCTTCTTTTCTTCCTAG 57.324 43.478 0.00 0.00 0.00 3.02
6061 7259 5.963865 AGCCTCTCTTCTTTTCTTCCTAGAT 59.036 40.000 0.00 0.00 0.00 1.98
6062 7260 6.048509 GCCTCTCTTCTTTTCTTCCTAGATG 58.951 44.000 0.00 0.00 0.00 2.90
6063 7261 6.351796 GCCTCTCTTCTTTTCTTCCTAGATGT 60.352 42.308 0.00 0.00 0.00 3.06
6064 7262 7.147811 GCCTCTCTTCTTTTCTTCCTAGATGTA 60.148 40.741 0.00 0.00 0.00 2.29
6065 7263 8.754080 CCTCTCTTCTTTTCTTCCTAGATGTAA 58.246 37.037 0.00 0.00 0.00 2.41
6099 7297 4.947645 ACCTGTGATCACCATTTGTTTTG 58.052 39.130 22.85 2.31 0.00 2.44
6102 7300 5.350504 TGTGATCACCATTTGTTTTGGTT 57.649 34.783 22.85 0.00 45.19 3.67
6103 7301 5.355596 TGTGATCACCATTTGTTTTGGTTC 58.644 37.500 22.85 0.00 45.19 3.62
6131 7329 2.290367 TGCAGGTGTTTGTTCGATCTTG 59.710 45.455 0.00 0.00 0.00 3.02
6150 7351 4.887071 TCTTGTAGGCTTCTTCTTTTGCAA 59.113 37.500 0.00 0.00 0.00 4.08
6158 7359 8.315391 AGGCTTCTTCTTTTGCAATTAAATTC 57.685 30.769 0.00 0.00 0.00 2.17
6186 7387 7.226720 GGTTATTATCATTCATCAAGACGTGGT 59.773 37.037 0.00 0.00 0.00 4.16
6191 7392 2.913777 TCATCAAGACGTGGTAGTCG 57.086 50.000 0.00 0.00 45.26 4.18
6197 7398 2.181954 AGACGTGGTAGTCGACTTCT 57.818 50.000 25.44 16.09 45.26 2.85
6215 7417 6.144078 ACTTCTTATTTTGGGTGTCACAAC 57.856 37.500 5.12 0.00 0.00 3.32
6225 7427 4.091453 GGGTGTCACAACCAAAATATCG 57.909 45.455 7.13 0.00 41.64 2.92
6226 7428 3.498082 GGTGTCACAACCAAAATATCGC 58.502 45.455 5.12 0.00 40.22 4.58
6227 7429 3.190535 GGTGTCACAACCAAAATATCGCT 59.809 43.478 5.12 0.00 40.22 4.93
6228 7430 4.393680 GGTGTCACAACCAAAATATCGCTA 59.606 41.667 5.12 0.00 40.22 4.26
6229 7431 5.321516 GTGTCACAACCAAAATATCGCTAC 58.678 41.667 0.00 0.00 0.00 3.58
6230 7432 4.092237 TGTCACAACCAAAATATCGCTACG 59.908 41.667 0.00 0.00 0.00 3.51
6231 7433 3.619483 TCACAACCAAAATATCGCTACGG 59.381 43.478 0.00 0.00 0.00 4.02
6232 7434 2.353579 ACAACCAAAATATCGCTACGGC 59.646 45.455 0.00 0.00 0.00 5.68
6233 7435 2.319136 ACCAAAATATCGCTACGGCA 57.681 45.000 0.00 0.00 38.60 5.69
6234 7436 2.846193 ACCAAAATATCGCTACGGCAT 58.154 42.857 0.00 0.00 38.60 4.40
6235 7437 2.806244 ACCAAAATATCGCTACGGCATC 59.194 45.455 0.00 0.00 38.60 3.91
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 2.083774 AGAAGACAGACAGCTCGAGAG 58.916 52.381 18.75 10.32 0.00 3.20
3 4 2.080693 GAGAAGACAGACAGCTCGAGA 58.919 52.381 18.75 0.00 0.00 4.04
4 5 1.132262 GGAGAAGACAGACAGCTCGAG 59.868 57.143 8.45 8.45 0.00 4.04
5 6 1.169577 GGAGAAGACAGACAGCTCGA 58.830 55.000 0.00 0.00 0.00 4.04
6 7 0.884514 TGGAGAAGACAGACAGCTCG 59.115 55.000 0.00 0.00 0.00 5.03
7 8 1.402194 CGTGGAGAAGACAGACAGCTC 60.402 57.143 0.00 0.00 0.00 4.09
8 9 0.600557 CGTGGAGAAGACAGACAGCT 59.399 55.000 0.00 0.00 0.00 4.24
9 10 0.389166 CCGTGGAGAAGACAGACAGC 60.389 60.000 0.00 0.00 0.00 4.40
10 11 0.389166 GCCGTGGAGAAGACAGACAG 60.389 60.000 0.00 0.00 0.00 3.51
11 12 1.666011 GCCGTGGAGAAGACAGACA 59.334 57.895 0.00 0.00 0.00 3.41
12 13 1.079750 GGCCGTGGAGAAGACAGAC 60.080 63.158 0.00 0.00 0.00 3.51
13 14 2.636412 CGGCCGTGGAGAAGACAGA 61.636 63.158 19.50 0.00 0.00 3.41
14 15 2.125912 CGGCCGTGGAGAAGACAG 60.126 66.667 19.50 0.00 0.00 3.51
15 16 3.691342 CCGGCCGTGGAGAAGACA 61.691 66.667 26.12 0.00 0.00 3.41
37 38 3.972971 GAGCAGTGCAGAGCAGGGG 62.973 68.421 19.20 0.00 40.08 4.79
38 39 2.436292 GAGCAGTGCAGAGCAGGG 60.436 66.667 19.20 0.00 40.08 4.45
39 40 1.448189 GAGAGCAGTGCAGAGCAGG 60.448 63.158 19.20 0.00 40.08 4.85
40 41 1.448189 GGAGAGCAGTGCAGAGCAG 60.448 63.158 19.20 0.00 40.08 4.24
41 42 2.661399 GGAGAGCAGTGCAGAGCA 59.339 61.111 19.20 0.00 35.60 4.26
42 43 2.508887 CGGAGAGCAGTGCAGAGC 60.509 66.667 19.20 3.50 0.00 4.09
66 67 3.426568 GTGAAGGACAGCAGCGGC 61.427 66.667 0.00 0.00 41.61 6.53
101 102 1.294659 GGAGAAGTGAGCTGCGTTGG 61.295 60.000 0.00 0.00 0.00 3.77
125 126 4.047059 GGAGTTGCGTCGACCGGA 62.047 66.667 9.46 3.64 36.94 5.14
170 171 1.964608 TTCAGATCCAGGAGCAGCCG 61.965 60.000 7.64 0.00 43.43 5.52
174 175 0.907486 CTGGTTCAGATCCAGGAGCA 59.093 55.000 17.21 0.00 46.03 4.26
180 181 2.268920 GCGGCTGGTTCAGATCCA 59.731 61.111 0.05 0.05 32.44 3.41
217 222 3.947132 CTGACCTGCTGCTGTCCGG 62.947 68.421 16.43 0.00 0.00 5.14
218 223 1.877576 TACTGACCTGCTGCTGTCCG 61.878 60.000 16.43 13.55 0.00 4.79
219 224 0.108424 CTACTGACCTGCTGCTGTCC 60.108 60.000 16.43 4.95 0.00 4.02
242 247 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
243 248 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
244 249 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
245 250 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
246 251 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
247 252 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
248 253 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
249 254 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
250 255 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
251 256 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
252 257 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
253 258 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
254 259 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
255 260 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
256 261 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
257 262 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
258 263 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
259 264 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
260 265 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
261 266 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
262 267 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
263 268 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
264 269 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
265 270 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
266 271 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
267 272 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
268 273 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
269 274 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
270 275 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
271 276 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
272 277 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
273 278 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
274 279 5.009911 CAGAGAGAGAGAGAGAGAGAGAGAG 59.990 52.000 0.00 0.00 0.00 3.20
275 280 4.892345 CAGAGAGAGAGAGAGAGAGAGAGA 59.108 50.000 0.00 0.00 0.00 3.10
276 281 4.648762 ACAGAGAGAGAGAGAGAGAGAGAG 59.351 50.000 0.00 0.00 0.00 3.20
277 282 4.403752 CACAGAGAGAGAGAGAGAGAGAGA 59.596 50.000 0.00 0.00 0.00 3.10
278 283 4.161189 ACACAGAGAGAGAGAGAGAGAGAG 59.839 50.000 0.00 0.00 0.00 3.20
279 284 4.081476 CACACAGAGAGAGAGAGAGAGAGA 60.081 50.000 0.00 0.00 0.00 3.10
280 285 4.186926 CACACAGAGAGAGAGAGAGAGAG 58.813 52.174 0.00 0.00 0.00 3.20
281 286 3.582647 ACACACAGAGAGAGAGAGAGAGA 59.417 47.826 0.00 0.00 0.00 3.10
282 287 3.686241 CACACACAGAGAGAGAGAGAGAG 59.314 52.174 0.00 0.00 0.00 3.20
283 288 3.072330 ACACACACAGAGAGAGAGAGAGA 59.928 47.826 0.00 0.00 0.00 3.10
284 289 3.189080 CACACACACAGAGAGAGAGAGAG 59.811 52.174 0.00 0.00 0.00 3.20
285 290 3.145286 CACACACACAGAGAGAGAGAGA 58.855 50.000 0.00 0.00 0.00 3.10
286 291 2.884012 ACACACACACAGAGAGAGAGAG 59.116 50.000 0.00 0.00 0.00 3.20
287 292 2.620585 CACACACACACAGAGAGAGAGA 59.379 50.000 0.00 0.00 0.00 3.10
288 293 2.360483 ACACACACACACAGAGAGAGAG 59.640 50.000 0.00 0.00 0.00 3.20
289 294 2.099756 CACACACACACACAGAGAGAGA 59.900 50.000 0.00 0.00 0.00 3.10
290 295 2.159184 ACACACACACACACAGAGAGAG 60.159 50.000 0.00 0.00 0.00 3.20
291 296 1.824852 ACACACACACACACAGAGAGA 59.175 47.619 0.00 0.00 0.00 3.10
292 297 1.929169 CACACACACACACACAGAGAG 59.071 52.381 0.00 0.00 0.00 3.20
293 298 1.275010 ACACACACACACACACAGAGA 59.725 47.619 0.00 0.00 0.00 3.10
294 299 1.394572 CACACACACACACACACAGAG 59.605 52.381 0.00 0.00 0.00 3.35
295 300 1.270571 ACACACACACACACACACAGA 60.271 47.619 0.00 0.00 0.00 3.41
311 316 3.166953 CTGAAACAGCGCGCACACA 62.167 57.895 35.10 22.18 0.00 3.72
312 317 2.425773 CTGAAACAGCGCGCACAC 60.426 61.111 35.10 18.88 0.00 3.82
313 318 2.894879 ACTGAAACAGCGCGCACA 60.895 55.556 35.10 21.50 34.37 4.57
315 320 4.312231 GCACTGAAACAGCGCGCA 62.312 61.111 35.10 10.55 34.37 6.09
320 325 1.200948 GAATGGAGGCACTGAAACAGC 59.799 52.381 0.00 0.00 41.55 4.40
386 392 2.363795 TGCCGCCTACCTAGCTGT 60.364 61.111 0.00 0.00 0.00 4.40
410 416 2.434359 CTTCCTTCCGGTGACCGC 60.434 66.667 20.39 0.00 46.86 5.68
421 433 0.107017 CGGTGATGGATGCCTTCCTT 60.107 55.000 4.59 0.00 45.68 3.36
443 458 2.040544 TACGGTTCGTCGGAGGTCC 61.041 63.158 0.00 1.98 41.54 4.46
455 470 1.300388 GTGCGTCAGTGGTACGGTT 60.300 57.895 6.51 0.00 40.64 4.44
466 481 1.289066 GACCTGCTACTGTGCGTCA 59.711 57.895 0.00 0.00 35.36 4.35
476 491 4.689612 AAAACAGAACTCTGACCTGCTA 57.310 40.909 13.61 0.00 46.59 3.49
497 512 6.627087 AAGAGAGAGAGAGAGAGAGAAGAA 57.373 41.667 0.00 0.00 0.00 2.52
499 514 7.730084 TCATAAGAGAGAGAGAGAGAGAGAAG 58.270 42.308 0.00 0.00 0.00 2.85
520 537 8.313292 CAAGGGGAAACAGAATTTTCAATCATA 58.687 33.333 0.00 0.00 37.24 2.15
528 545 6.099557 TCAATCACAAGGGGAAACAGAATTTT 59.900 34.615 0.00 0.00 0.00 1.82
634 651 1.280133 ACCTAGCTGCTGCAAATGAGA 59.720 47.619 18.42 0.00 42.74 3.27
636 653 2.237143 AGTACCTAGCTGCTGCAAATGA 59.763 45.455 18.42 0.00 42.74 2.57
643 661 1.339610 CTGCCTAGTACCTAGCTGCTG 59.660 57.143 13.43 0.00 33.12 4.41
648 666 0.953003 CCGTCTGCCTAGTACCTAGC 59.047 60.000 0.00 0.00 33.12 3.42
655 673 3.760035 CGGTGCCGTCTGCCTAGT 61.760 66.667 1.93 0.00 40.16 2.57
688 706 4.382320 TACGTTGGTCCTGCCGGC 62.382 66.667 22.73 22.73 41.21 6.13
698 716 2.604462 GGGTGCGTTTATAGTACGTTGG 59.396 50.000 0.00 0.00 40.92 3.77
699 717 2.604462 GGGGTGCGTTTATAGTACGTTG 59.396 50.000 0.00 0.00 40.92 4.10
700 718 2.497273 AGGGGTGCGTTTATAGTACGTT 59.503 45.455 0.00 0.00 40.92 3.99
701 719 2.102578 AGGGGTGCGTTTATAGTACGT 58.897 47.619 10.07 0.00 40.92 3.57
702 720 2.877043 AGGGGTGCGTTTATAGTACG 57.123 50.000 5.41 5.41 41.71 3.67
704 722 3.377573 AGGAAGGGGTGCGTTTATAGTA 58.622 45.455 0.00 0.00 0.00 1.82
705 723 2.193993 AGGAAGGGGTGCGTTTATAGT 58.806 47.619 0.00 0.00 0.00 2.12
706 724 3.118371 AGAAGGAAGGGGTGCGTTTATAG 60.118 47.826 0.00 0.00 0.00 1.31
707 725 2.841881 AGAAGGAAGGGGTGCGTTTATA 59.158 45.455 0.00 0.00 0.00 0.98
708 726 1.633945 AGAAGGAAGGGGTGCGTTTAT 59.366 47.619 0.00 0.00 0.00 1.40
709 727 1.061546 AGAAGGAAGGGGTGCGTTTA 58.938 50.000 0.00 0.00 0.00 2.01
711 729 0.250770 GAAGAAGGAAGGGGTGCGTT 60.251 55.000 0.00 0.00 0.00 4.84
712 730 1.375326 GAAGAAGGAAGGGGTGCGT 59.625 57.895 0.00 0.00 0.00 5.24
713 731 0.674895 CTGAAGAAGGAAGGGGTGCG 60.675 60.000 0.00 0.00 0.00 5.34
714 732 0.402121 ACTGAAGAAGGAAGGGGTGC 59.598 55.000 0.00 0.00 0.00 5.01
716 734 3.720002 TGTAAACTGAAGAAGGAAGGGGT 59.280 43.478 0.00 0.00 0.00 4.95
718 736 3.753797 GCTGTAAACTGAAGAAGGAAGGG 59.246 47.826 0.00 0.00 0.00 3.95
719 737 4.646572 AGCTGTAAACTGAAGAAGGAAGG 58.353 43.478 0.00 0.00 0.00 3.46
721 739 5.227908 CGTAGCTGTAAACTGAAGAAGGAA 58.772 41.667 0.00 0.00 0.00 3.36
722 740 4.321750 CCGTAGCTGTAAACTGAAGAAGGA 60.322 45.833 0.00 0.00 0.00 3.36
724 742 3.927142 CCCGTAGCTGTAAACTGAAGAAG 59.073 47.826 0.00 0.00 0.00 2.85
725 743 3.863400 GCCCGTAGCTGTAAACTGAAGAA 60.863 47.826 0.00 0.00 38.99 2.52
726 744 2.353406 GCCCGTAGCTGTAAACTGAAGA 60.353 50.000 0.00 0.00 38.99 2.87
727 745 2.000447 GCCCGTAGCTGTAAACTGAAG 59.000 52.381 0.00 0.00 38.99 3.02
729 747 0.970640 TGCCCGTAGCTGTAAACTGA 59.029 50.000 0.00 0.00 44.23 3.41
744 781 2.674357 TCGTTCGTAAAAATAGCTGCCC 59.326 45.455 0.00 0.00 0.00 5.36
745 782 4.330740 TTCGTTCGTAAAAATAGCTGCC 57.669 40.909 0.00 0.00 0.00 4.85
760 798 6.677913 TCCAAGAATCAAAAGGAATTCGTTC 58.322 36.000 13.41 1.05 0.00 3.95
764 802 6.400568 TGCATCCAAGAATCAAAAGGAATTC 58.599 36.000 0.00 0.00 31.17 2.17
792 830 1.382914 ACTATTCCCAGGGTTGCCTT 58.617 50.000 5.01 0.00 0.00 4.35
793 831 1.382914 AACTATTCCCAGGGTTGCCT 58.617 50.000 5.01 0.00 0.00 4.75
794 832 2.100197 GAAACTATTCCCAGGGTTGCC 58.900 52.381 5.01 0.00 0.00 4.52
795 833 2.802719 TGAAACTATTCCCAGGGTTGC 58.197 47.619 5.01 0.00 34.49 4.17
796 834 5.105351 GGATTTGAAACTATTCCCAGGGTTG 60.105 44.000 5.01 0.00 34.49 3.77
797 835 5.023452 GGATTTGAAACTATTCCCAGGGTT 58.977 41.667 5.01 0.00 34.49 4.11
798 836 4.045334 TGGATTTGAAACTATTCCCAGGGT 59.955 41.667 5.01 0.00 34.49 4.34
799 837 4.609301 TGGATTTGAAACTATTCCCAGGG 58.391 43.478 0.00 0.00 34.49 4.45
800 838 5.509498 TCTGGATTTGAAACTATTCCCAGG 58.491 41.667 0.00 0.00 39.66 4.45
801 839 7.340232 TCAATCTGGATTTGAAACTATTCCCAG 59.660 37.037 0.00 0.00 40.14 4.45
802 840 7.181361 TCAATCTGGATTTGAAACTATTCCCA 58.819 34.615 0.00 0.00 34.49 4.37
803 841 7.645058 TCAATCTGGATTTGAAACTATTCCC 57.355 36.000 0.00 0.00 34.49 3.97
804 842 9.358872 GTTTCAATCTGGATTTGAAACTATTCC 57.641 33.333 24.16 6.86 40.53 3.01
805 843 9.358872 GGTTTCAATCTGGATTTGAAACTATTC 57.641 33.333 27.45 15.49 41.63 1.75
806 844 8.869109 TGGTTTCAATCTGGATTTGAAACTATT 58.131 29.630 27.45 0.00 41.63 1.73
807 845 8.421249 TGGTTTCAATCTGGATTTGAAACTAT 57.579 30.769 27.45 0.00 41.63 2.12
808 846 7.039784 CCTGGTTTCAATCTGGATTTGAAACTA 60.040 37.037 27.45 23.71 41.63 2.24
809 847 6.239402 CCTGGTTTCAATCTGGATTTGAAACT 60.239 38.462 27.45 0.16 41.63 2.66
810 848 5.928264 CCTGGTTTCAATCTGGATTTGAAAC 59.072 40.000 23.73 23.73 41.46 2.78
811 849 5.511202 GCCTGGTTTCAATCTGGATTTGAAA 60.511 40.000 7.33 7.33 30.31 2.69
812 850 4.021192 GCCTGGTTTCAATCTGGATTTGAA 60.021 41.667 0.05 0.00 30.31 2.69
813 851 3.511146 GCCTGGTTTCAATCTGGATTTGA 59.489 43.478 0.05 0.00 30.31 2.69
814 852 3.368739 GGCCTGGTTTCAATCTGGATTTG 60.369 47.826 0.00 0.00 30.31 2.32
815 853 2.833943 GGCCTGGTTTCAATCTGGATTT 59.166 45.455 0.00 0.00 30.31 2.17
816 854 2.225343 TGGCCTGGTTTCAATCTGGATT 60.225 45.455 3.32 0.00 30.31 3.01
817 855 1.358787 TGGCCTGGTTTCAATCTGGAT 59.641 47.619 3.32 0.00 30.31 3.41
818 856 0.776810 TGGCCTGGTTTCAATCTGGA 59.223 50.000 3.32 0.00 30.31 3.86
819 857 1.631405 TTGGCCTGGTTTCAATCTGG 58.369 50.000 3.32 0.00 0.00 3.86
820 858 2.289010 GGTTTGGCCTGGTTTCAATCTG 60.289 50.000 3.32 0.00 0.00 2.90
821 859 1.970640 GGTTTGGCCTGGTTTCAATCT 59.029 47.619 3.32 0.00 0.00 2.40
822 860 1.336795 CGGTTTGGCCTGGTTTCAATC 60.337 52.381 3.32 0.00 34.25 2.67
823 861 0.678950 CGGTTTGGCCTGGTTTCAAT 59.321 50.000 3.32 0.00 34.25 2.57
824 862 2.022240 GCGGTTTGGCCTGGTTTCAA 62.022 55.000 3.32 0.00 34.25 2.69
825 863 2.494530 GCGGTTTGGCCTGGTTTCA 61.495 57.895 3.32 0.00 34.25 2.69
826 864 2.200337 AGCGGTTTGGCCTGGTTTC 61.200 57.895 3.32 0.00 34.25 2.78
827 865 2.123468 AGCGGTTTGGCCTGGTTT 60.123 55.556 3.32 0.00 34.25 3.27
828 866 2.912025 CAGCGGTTTGGCCTGGTT 60.912 61.111 3.32 0.00 34.25 3.67
831 869 4.347453 GTGCAGCGGTTTGGCCTG 62.347 66.667 3.32 0.00 34.25 4.85
832 870 4.892965 TGTGCAGCGGTTTGGCCT 62.893 61.111 3.32 0.00 34.25 5.19
833 871 3.631487 GATGTGCAGCGGTTTGGCC 62.631 63.158 0.00 0.00 0.00 5.36
834 872 2.126346 GATGTGCAGCGGTTTGGC 60.126 61.111 0.00 0.00 0.00 4.52
835 873 1.597797 ATGGATGTGCAGCGGTTTGG 61.598 55.000 0.00 0.00 0.00 3.28
836 874 0.179156 GATGGATGTGCAGCGGTTTG 60.179 55.000 0.00 0.00 0.00 2.93
837 875 1.315257 GGATGGATGTGCAGCGGTTT 61.315 55.000 0.00 0.00 0.00 3.27
838 876 1.750399 GGATGGATGTGCAGCGGTT 60.750 57.895 0.00 0.00 0.00 4.44
839 877 2.124570 GGATGGATGTGCAGCGGT 60.125 61.111 0.00 0.00 0.00 5.68
844 882 3.088912 TGCAGGGATGGATGTGCA 58.911 55.556 0.00 0.00 43.50 4.57
846 884 0.887836 CGGATGCAGGGATGGATGTG 60.888 60.000 0.00 0.00 0.00 3.21
847 885 1.056125 TCGGATGCAGGGATGGATGT 61.056 55.000 0.00 0.00 0.00 3.06
849 887 2.064628 CTCGGATGCAGGGATGGAT 58.935 57.895 0.00 0.00 0.00 3.41
969 1007 0.306533 CGACGTTGGGACCAAAGTTG 59.693 55.000 20.62 19.53 45.61 3.16
1122 1160 1.997669 GGAAGTAGTCCAGCTCGTTG 58.002 55.000 0.00 0.00 46.97 4.10
1153 1191 0.673333 TTGTACGTGCCATGGAGCTG 60.673 55.000 18.40 3.89 0.00 4.24
1294 1404 1.543941 GAATCGCCGCGTGATCTCTG 61.544 60.000 13.39 0.00 31.05 3.35
1295 1405 1.299468 GAATCGCCGCGTGATCTCT 60.299 57.895 13.39 0.00 31.05 3.10
1296 1406 2.303676 GGAATCGCCGCGTGATCTC 61.304 63.158 13.39 8.38 31.05 2.75
1299 1409 2.279517 GAGGAATCGCCGCGTGAT 60.280 61.111 13.39 5.18 43.43 3.06
1377 1490 1.140652 GAAGATGAGCAAGGGAGGAGG 59.859 57.143 0.00 0.00 0.00 4.30
1463 1579 4.520492 TCTTTTGAGAGAAATCAACCCTGC 59.480 41.667 0.00 0.00 38.87 4.85
1464 1580 6.432162 TGATCTTTTGAGAGAAATCAACCCTG 59.568 38.462 0.00 0.00 38.87 4.45
1503 1619 1.790755 TACGCACAGGCTGTAGTTTG 58.209 50.000 25.75 13.87 38.10 2.93
1509 1625 1.270839 ACATCTTTACGCACAGGCTGT 60.271 47.619 15.88 15.88 38.10 4.40
1629 1745 2.364324 GCTATTCATGACACGGTCCCTA 59.636 50.000 0.00 0.00 0.00 3.53
1686 1802 2.094182 CGGAAGCACAGTTAGAGCCTTA 60.094 50.000 0.00 0.00 33.99 2.69
1725 1841 3.641434 ATGAGAGTTGTCTTCCCCATG 57.359 47.619 0.00 0.00 30.97 3.66
1775 1891 3.805066 TCATGACTGGAAAATGGTCCA 57.195 42.857 0.00 0.00 45.72 4.02
1779 1895 5.664294 TCCAAATCATGACTGGAAAATGG 57.336 39.130 20.98 5.15 36.30 3.16
1823 1939 6.945938 TCTGTTCTAGCACCTTATCTAGAC 57.054 41.667 0.00 0.00 40.48 2.59
1881 1997 3.246619 CTCTTCGGTTGTACTGCTCTTC 58.753 50.000 0.00 0.00 0.00 2.87
1896 2012 4.997905 TCTTTGTTCAATCAGCTCTTCG 57.002 40.909 0.00 0.00 0.00 3.79
1996 2112 9.903682 ATTTTCTTGTGATTTATTGAGTGTCAG 57.096 29.630 0.00 0.00 0.00 3.51
2022 2138 2.829120 TGTGACGAGTATCATGGAACCA 59.171 45.455 0.00 0.00 33.17 3.67
2034 2150 1.135527 TGAAACCGAGTTGTGACGAGT 59.864 47.619 0.00 0.00 0.00 4.18
2063 2179 5.071250 TGACCAGTTGCTTTAACCTTCTCTA 59.929 40.000 0.00 0.00 40.24 2.43
2085 2201 8.160765 TCTAAACCATCCAGTTTTATTGAGTGA 58.839 33.333 0.00 0.00 40.38 3.41
2140 2256 3.692101 TGTTCGTCACCAAAGACAAATGT 59.308 39.130 0.00 0.00 38.43 2.71
2157 2273 4.457603 TGTTTATCCCTTGGACATTGTTCG 59.542 41.667 0.00 0.00 32.98 3.95
2250 2366 4.162509 AGGTCTTTGCTCAGTAATCTACCC 59.837 45.833 0.00 0.00 0.00 3.69
2451 2567 5.882040 TCTAGTCCGATCCATAGACTGATT 58.118 41.667 10.87 0.00 40.93 2.57
2542 2658 5.830000 TCTCTGAAAAATCCATGCATGAG 57.170 39.130 28.31 17.31 0.00 2.90
2547 2663 6.506500 TTCTCTTCTCTGAAAAATCCATGC 57.493 37.500 0.00 0.00 0.00 4.06
2577 2693 5.574082 TGCATAACATAACGCAAACCATAC 58.426 37.500 0.00 0.00 0.00 2.39
2604 2720 2.744741 CAATGCCAAATCATGCAGCAAA 59.255 40.909 0.00 0.00 41.46 3.68
2638 2754 7.039882 GGGAGACGAAAACTAAGACAATCATA 58.960 38.462 0.00 0.00 0.00 2.15
2655 2771 2.291346 TGATCCAACACTAGGGAGACGA 60.291 50.000 0.00 0.00 36.45 4.20
2680 2796 1.308069 CGGGTGGTTGGCTGAATCTG 61.308 60.000 0.00 0.00 0.00 2.90
2709 2825 7.768807 TTTACCTAAACCACATGTGCTTATT 57.231 32.000 20.81 13.20 0.00 1.40
2720 2836 7.067008 ACACTGCATCATATTTACCTAAACCAC 59.933 37.037 0.00 0.00 0.00 4.16
2796 2912 6.987992 ACATCAATGTTTGCAATTCTTCAACT 59.012 30.769 0.00 0.00 37.90 3.16
2830 2946 2.624636 GGCAAAGCCTTCATCCATTTG 58.375 47.619 0.00 0.00 46.69 2.32
2844 2960 7.910441 AAAATCACCAAATATCTTGGCAAAG 57.090 32.000 0.00 0.00 43.23 2.77
2869 2985 0.693049 AGAGTGTTCGCTTCCCCAAT 59.307 50.000 0.00 0.00 0.00 3.16
2898 3014 1.466950 CAAAGCATGCTTGGCAAATGG 59.533 47.619 32.54 11.44 43.62 3.16
2955 3071 2.933573 CAGAGGTATCGTAGGTGGAGT 58.066 52.381 0.00 0.00 0.00 3.85
2973 3089 2.760092 GCTCTCATATCTCCCTAGGCAG 59.240 54.545 2.05 0.00 0.00 4.85
2976 3092 3.011144 TCTGGCTCTCATATCTCCCTAGG 59.989 52.174 0.06 0.06 0.00 3.02
2984 3100 5.353678 GGTAAATGCATCTGGCTCTCATATC 59.646 44.000 0.00 0.00 45.15 1.63
3013 3129 9.264719 CCTTAAATGATAAAATTTGGAGATGCC 57.735 33.333 0.00 0.00 32.16 4.40
3209 3331 4.566759 GCTTTGTTTCAAACCCTTCACTTC 59.433 41.667 0.00 0.00 0.00 3.01
3226 3348 3.561725 GTCAAGTGCTCTAGTTGCTTTGT 59.438 43.478 17.38 2.35 39.17 2.83
3307 3429 4.090761 TCTCCATCAGTTTTGCTTGAGT 57.909 40.909 0.00 0.00 0.00 3.41
3412 3534 0.038166 TCTCCATGTGGTTGAAGGCC 59.962 55.000 0.00 0.00 36.34 5.19
3461 3583 3.009033 CCATGTTGGACAAGAAGGACCTA 59.991 47.826 0.00 0.00 40.96 3.08
3643 3765 7.306574 GCCAATGAGTTTAAGCTTTGTTAACAC 60.307 37.037 8.07 4.39 0.00 3.32
3646 3768 6.041523 AGGCCAATGAGTTTAAGCTTTGTTAA 59.958 34.615 3.20 0.00 0.00 2.01
3696 3818 2.037772 GGAAGACTCTTGTTCAGCTGGA 59.962 50.000 15.13 0.46 0.00 3.86
3796 4626 1.428912 TGAGAAAGGCAACCCCAAGAT 59.571 47.619 0.00 0.00 35.39 2.40
3920 4750 2.309528 TTTCACAGTGACAGAACGCT 57.690 45.000 1.52 0.00 0.00 5.07
3934 4764 7.816640 TCCTTTAGCATCTTTACACATTTCAC 58.183 34.615 0.00 0.00 0.00 3.18
3983 4813 5.277683 CCGATAATCTTCAATTGTGCTCCAG 60.278 44.000 5.13 0.00 0.00 3.86
3991 4821 7.205992 TCACTCTCTCCGATAATCTTCAATTG 58.794 38.462 0.00 0.00 0.00 2.32
4059 4889 0.097325 GTGTCAGCGTCTCTAGACCG 59.903 60.000 4.58 3.28 41.86 4.79
4070 4900 4.350620 ACTTGCTCAGTGTCAGCG 57.649 55.556 0.00 0.00 40.01 5.18
4082 4912 1.227943 TCCAGAGGTGTGCACTTGC 60.228 57.895 19.41 8.17 42.50 4.01
4090 4920 1.131638 TGCTTCAACTCCAGAGGTGT 58.868 50.000 12.27 0.00 45.99 4.16
4231 5061 4.515567 GCCAGTATTACCAGTTAAGCCATC 59.484 45.833 0.00 0.00 0.00 3.51
4241 5071 2.431057 AGTTCCTCGCCAGTATTACCAG 59.569 50.000 0.00 0.00 0.00 4.00
4332 5162 1.307866 ATCCACCCCCACTACCAGG 60.308 63.158 0.00 0.00 0.00 4.45
4395 5226 2.486982 CTCTGCTGCTGCTGTTGTTATT 59.513 45.455 17.00 0.00 40.48 1.40
4396 5227 2.082231 CTCTGCTGCTGCTGTTGTTAT 58.918 47.619 17.00 0.00 40.48 1.89
4397 5228 1.516161 CTCTGCTGCTGCTGTTGTTA 58.484 50.000 17.00 0.00 40.48 2.41
4400 5231 0.887836 TTCCTCTGCTGCTGCTGTTG 60.888 55.000 17.00 12.47 40.48 3.33
4446 5283 0.524392 GTGAGTCACGGAGATGAGCG 60.524 60.000 7.68 0.00 0.00 5.03
4456 5293 2.259618 CAATTCCCGTAGTGAGTCACG 58.740 52.381 17.40 6.15 39.64 4.35
4560 5400 3.244561 CCCAAAGCACTAGAAACTGGAGA 60.245 47.826 0.00 0.00 0.00 3.71
4572 5495 2.242043 CCTTTCACATCCCAAAGCACT 58.758 47.619 0.00 0.00 0.00 4.40
4702 5625 2.142292 AATTCGTTGAGCTGGCCCCT 62.142 55.000 0.00 0.00 0.00 4.79
4776 5699 1.615116 CCCTCAGCATCTTCCAAAGCA 60.615 52.381 0.00 0.00 0.00 3.91
4799 5722 0.887836 CTGTGCCTGCTGCTCTTCAA 60.888 55.000 0.00 0.00 42.00 2.69
5018 5941 4.036852 GGAGTTGTTGAAGGTCCTTGAAAG 59.963 45.833 9.46 0.00 0.00 2.62
5230 6156 4.950475 TGTTTGTGTTACCTTGGATCACAA 59.050 37.500 17.00 17.00 43.84 3.33
5231 6157 4.527944 TGTTTGTGTTACCTTGGATCACA 58.472 39.130 0.00 3.42 37.27 3.58
5285 6241 6.981722 AGTTATTAAGCTTGTGTTTGAAGGG 58.018 36.000 9.86 0.00 0.00 3.95
5289 6245 7.801716 ACAGAGTTATTAAGCTTGTGTTTGA 57.198 32.000 9.86 0.00 0.00 2.69
5293 6249 7.568199 ACAAACAGAGTTATTAAGCTTGTGT 57.432 32.000 9.86 0.00 0.00 3.72
5295 6251 8.135529 GGAAACAAACAGAGTTATTAAGCTTGT 58.864 33.333 9.86 0.00 0.00 3.16
5297 6253 8.232913 TGGAAACAAACAGAGTTATTAAGCTT 57.767 30.769 3.48 3.48 37.44 3.74
5298 6254 7.817418 TGGAAACAAACAGAGTTATTAAGCT 57.183 32.000 0.00 0.00 37.44 3.74
5319 6413 0.837691 AGTCCTGCACAGTGGATGGA 60.838 55.000 1.84 5.96 34.58 3.41
5341 6435 6.534634 ACAAGGCTAGAAGAATGTACAAAGT 58.465 36.000 0.00 0.00 0.00 2.66
5343 6437 7.903145 TCTACAAGGCTAGAAGAATGTACAAA 58.097 34.615 0.00 0.00 0.00 2.83
5451 6574 7.602644 CAGCAGGAGTAAACAGTTTAGATGTAA 59.397 37.037 5.96 0.00 0.00 2.41
5508 6645 9.990360 TGTTATTAGTGTGTAGTGAAAGATCAA 57.010 29.630 0.00 0.00 37.30 2.57
5556 6695 6.975949 TCTCCTAGTTCATAGACTTCTCCTT 58.024 40.000 0.00 0.00 32.76 3.36
5557 6696 6.584471 TCTCCTAGTTCATAGACTTCTCCT 57.416 41.667 0.00 0.00 32.76 3.69
5609 6768 9.866655 TGCTTCCACCAAATTATCTATTCTATT 57.133 29.630 0.00 0.00 0.00 1.73
5648 6807 5.444176 CCATCTTATTTTCTGCCTCTCCTT 58.556 41.667 0.00 0.00 0.00 3.36
5655 6814 3.032265 ACCCCCATCTTATTTTCTGCC 57.968 47.619 0.00 0.00 0.00 4.85
5674 6833 1.000394 GTGCACCCCCATGTGTTTAAC 60.000 52.381 5.22 0.00 38.52 2.01
5736 6898 5.518848 ACATGTTGTTCTGCTTTGAATCA 57.481 34.783 0.00 0.00 0.00 2.57
5737 6899 6.698766 AGAAACATGTTGTTCTGCTTTGAATC 59.301 34.615 12.82 0.42 40.14 2.52
5738 6900 6.477688 CAGAAACATGTTGTTCTGCTTTGAAT 59.522 34.615 21.44 0.00 40.14 2.57
5739 6901 5.806502 CAGAAACATGTTGTTCTGCTTTGAA 59.193 36.000 21.44 0.00 40.14 2.69
5740 6902 5.125257 TCAGAAACATGTTGTTCTGCTTTGA 59.875 36.000 25.66 12.28 40.14 2.69
5741 6903 5.342433 TCAGAAACATGTTGTTCTGCTTTG 58.658 37.500 25.66 10.54 40.14 2.77
5744 6906 4.641989 AGTTCAGAAACATGTTGTTCTGCT 59.358 37.500 25.66 18.40 40.14 4.24
5745 6907 4.736793 CAGTTCAGAAACATGTTGTTCTGC 59.263 41.667 25.66 17.00 40.14 4.26
5746 6908 6.122850 TCAGTTCAGAAACATGTTGTTCTG 57.877 37.500 24.96 24.96 40.14 3.02
5747 6909 6.375455 AGTTCAGTTCAGAAACATGTTGTTCT 59.625 34.615 12.82 9.43 40.14 3.01
5757 6919 6.128254 GCCCAGTTATAGTTCAGTTCAGAAAC 60.128 42.308 0.00 0.00 35.50 2.78
5813 6983 5.373222 TGAAAGTTCCTGCAGCTAAGTAAA 58.627 37.500 8.66 0.00 0.00 2.01
5832 7009 3.332187 TGATGTGGACACCCCTAATGAAA 59.668 43.478 0.00 0.00 35.38 2.69
5912 7096 6.059787 AGAAAACAGAAGTCTGATATGGCT 57.940 37.500 15.15 2.26 46.59 4.75
6018 7206 3.690745 GCAGAAGGCATTGGCTGT 58.309 55.556 14.12 4.18 43.97 4.40
6057 7255 9.613428 CACAGGTTCCTTTGATAATTACATCTA 57.387 33.333 0.00 0.00 0.00 1.98
6059 7257 8.506168 TCACAGGTTCCTTTGATAATTACATC 57.494 34.615 3.87 0.00 0.00 3.06
6061 7259 8.106462 TGATCACAGGTTCCTTTGATAATTACA 58.894 33.333 17.15 9.96 34.72 2.41
6062 7260 8.398665 GTGATCACAGGTTCCTTTGATAATTAC 58.601 37.037 21.07 11.64 34.72 1.89
6063 7261 7.556275 GGTGATCACAGGTTCCTTTGATAATTA 59.444 37.037 26.47 5.52 34.72 1.40
6064 7262 6.378280 GGTGATCACAGGTTCCTTTGATAATT 59.622 38.462 26.47 0.71 34.72 1.40
6065 7263 5.888161 GGTGATCACAGGTTCCTTTGATAAT 59.112 40.000 26.47 1.02 34.72 1.28
6066 7264 5.222027 TGGTGATCACAGGTTCCTTTGATAA 60.222 40.000 26.47 9.85 34.72 1.75
6067 7265 4.288366 TGGTGATCACAGGTTCCTTTGATA 59.712 41.667 26.47 3.24 34.72 2.15
6068 7266 3.074390 TGGTGATCACAGGTTCCTTTGAT 59.926 43.478 26.47 17.15 36.53 2.57
6069 7267 2.441375 TGGTGATCACAGGTTCCTTTGA 59.559 45.455 26.47 9.66 0.00 2.69
6070 7268 2.862541 TGGTGATCACAGGTTCCTTTG 58.137 47.619 26.47 0.00 0.00 2.77
6071 7269 3.814504 ATGGTGATCACAGGTTCCTTT 57.185 42.857 26.47 0.00 0.00 3.11
6072 7270 3.814504 AATGGTGATCACAGGTTCCTT 57.185 42.857 26.47 6.04 0.00 3.36
6073 7271 3.181429 ACAAATGGTGATCACAGGTTCCT 60.181 43.478 26.47 0.00 0.00 3.36
6074 7272 3.157087 ACAAATGGTGATCACAGGTTCC 58.843 45.455 26.47 9.40 0.00 3.62
6075 7273 4.853924 AACAAATGGTGATCACAGGTTC 57.146 40.909 26.47 9.89 0.00 3.62
6131 7329 8.763049 ATTTAATTGCAAAAGAAGAAGCCTAC 57.237 30.769 1.71 0.00 0.00 3.18
6158 7359 6.423905 ACGTCTTGATGAATGATAATAACCCG 59.576 38.462 0.00 0.00 0.00 5.28
6186 7387 6.105397 ACACCCAAAATAAGAAGTCGACTA 57.895 37.500 20.39 2.82 0.00 2.59
6191 7392 6.206498 GTTGTGACACCCAAAATAAGAAGTC 58.794 40.000 2.45 0.00 0.00 3.01
6197 7398 5.677319 TTTGGTTGTGACACCCAAAATAA 57.323 34.783 22.57 2.51 43.35 1.40
6215 7417 3.455619 GATGCCGTAGCGATATTTTGG 57.544 47.619 0.00 0.00 44.31 3.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.