Multiple sequence alignment - TraesCS2A01G002600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G002600 chr2A 100.000 2863 0 0 1 2863 1607580 1610442 0.000000e+00 5288.0
1 TraesCS2A01G002600 chr2A 93.233 532 24 3 1076 1595 718383662 718383131 0.000000e+00 773.0
2 TraesCS2A01G002600 chr2A 88.589 482 40 4 1884 2361 453510068 453509598 3.200000e-159 571.0
3 TraesCS2A01G002600 chr2A 87.967 482 51 6 2369 2845 453506879 453506400 1.930000e-156 562.0
4 TraesCS2A01G002600 chr2A 96.091 307 8 4 415 718 771188026 771187721 5.510000e-137 497.0
5 TraesCS2A01G002600 chr2A 86.499 437 54 3 2361 2792 453506973 453506537 2.580000e-130 475.0
6 TraesCS2A01G002600 chr2A 87.742 310 24 8 783 1081 375040086 375040392 1.630000e-92 350.0
7 TraesCS2A01G002600 chr2A 84.746 354 49 3 2453 2801 453506967 453506614 1.630000e-92 350.0
8 TraesCS2A01G002600 chr2A 84.026 313 38 7 2501 2801 1609901 1610213 1.000000e-74 291.0
9 TraesCS2A01G002600 chr2A 84.026 313 38 7 2322 2634 1610080 1610380 1.000000e-74 291.0
10 TraesCS2A01G002600 chr2A 80.206 389 65 9 2417 2793 1609902 1610290 6.040000e-72 281.0
11 TraesCS2A01G002600 chr2A 80.206 389 65 9 2323 2711 1609996 1610372 6.040000e-72 281.0
12 TraesCS2A01G002600 chr2D 94.495 1108 38 7 795 1881 646462543 646461438 0.000000e+00 1687.0
13 TraesCS2A01G002600 chr2D 92.986 556 23 7 1080 1620 584256723 584256169 0.000000e+00 797.0
14 TraesCS2A01G002600 chr2D 96.233 292 9 2 416 706 645315142 645314852 7.180000e-131 477.0
15 TraesCS2A01G002600 chrUn 93.978 1096 47 8 798 1881 337092058 337093146 0.000000e+00 1640.0
16 TraesCS2A01G002600 chr5A 88.320 899 61 16 743 1627 219244250 219245118 0.000000e+00 1038.0
17 TraesCS2A01G002600 chr5A 89.677 804 67 7 1985 2777 46012428 46013226 0.000000e+00 1011.0
18 TraesCS2A01G002600 chr5A 96.651 418 11 2 1 415 648954647 648955064 0.000000e+00 691.0
19 TraesCS2A01G002600 chr5A 96.525 259 9 0 1623 1881 219247585 219247843 2.040000e-116 429.0
20 TraesCS2A01G002600 chr5A 88.095 294 24 3 798 1080 595916903 595916610 3.530000e-89 339.0
21 TraesCS2A01G002600 chr5A 86.590 261 30 3 2546 2801 46012821 46013081 1.680000e-72 283.0
22 TraesCS2A01G002600 chr5A 83.391 289 38 6 2322 2610 46012948 46013226 2.830000e-65 259.0
23 TraesCS2A01G002600 chr5A 87.919 149 9 6 701 848 648955056 648955196 1.760000e-37 167.0
24 TraesCS2A01G002600 chr5A 96.040 101 4 0 2763 2863 46014816 46014916 6.350000e-37 165.0
25 TraesCS2A01G002600 chr2B 92.196 551 27 6 1080 1615 703623152 703622603 0.000000e+00 765.0
26 TraesCS2A01G002600 chr2B 95.848 289 11 1 415 702 685568687 685568975 1.550000e-127 466.0
27 TraesCS2A01G002600 chr5D 96.643 417 12 1 1 415 54812611 54812195 0.000000e+00 691.0
28 TraesCS2A01G002600 chr5D 86.588 425 38 10 1 419 466560904 466560493 4.350000e-123 451.0
29 TraesCS2A01G002600 chr5D 86.364 418 39 9 1 412 2277900 2278305 9.420000e-120 440.0
30 TraesCS2A01G002600 chr5D 91.608 286 21 3 798 1081 448740271 448739987 2.670000e-105 392.0
31 TraesCS2A01G002600 chr5D 97.590 83 1 1 702 783 54812202 54812120 1.070000e-29 141.0
32 TraesCS2A01G002600 chr7A 96.172 418 12 3 1 415 299498132 299497716 0.000000e+00 680.0
33 TraesCS2A01G002600 chr7A 96.540 289 7 2 415 701 11381143 11380856 2.580000e-130 475.0
34 TraesCS2A01G002600 chr7A 88.136 295 23 5 798 1080 50806669 50806963 9.820000e-90 340.0
35 TraesCS2A01G002600 chr7B 95.923 417 15 1 1 415 149529160 149529576 0.000000e+00 675.0
36 TraesCS2A01G002600 chr7B 93.458 107 4 3 703 809 149529570 149529673 3.820000e-34 156.0
37 TraesCS2A01G002600 chr4A 95.215 418 17 2 1 415 374637677 374638094 0.000000e+00 658.0
38 TraesCS2A01G002600 chr4A 88.969 417 22 9 1 415 7896992 7896598 7.130000e-136 494.0
39 TraesCS2A01G002600 chr4A 95.517 290 12 1 415 703 742276787 742276498 2.010000e-126 462.0
40 TraesCS2A01G002600 chr3B 93.494 415 21 3 7 415 154926904 154926490 1.890000e-171 612.0
41 TraesCS2A01G002600 chr3B 87.716 521 51 5 1080 1588 26752243 26751724 1.900000e-166 595.0
42 TraesCS2A01G002600 chr3B 87.140 521 54 9 1080 1588 14524961 14524442 1.910000e-161 579.0
43 TraesCS2A01G002600 chr3B 95.848 289 11 1 416 703 4310875 4310587 1.550000e-127 466.0
44 TraesCS2A01G002600 chr3B 94.371 302 12 5 413 711 826069707 826069408 2.600000e-125 459.0
45 TraesCS2A01G002600 chr3B 92.135 89 4 3 702 790 154926497 154926412 3.870000e-24 122.0
46 TraesCS2A01G002600 chr3A 87.066 518 54 9 1080 1585 16632267 16632783 8.900000e-160 573.0
47 TraesCS2A01G002600 chr3A 88.136 295 23 6 798 1080 429624168 429623874 9.820000e-90 340.0
48 TraesCS2A01G002600 chr3A 80.092 437 79 6 2369 2801 34475824 34475392 4.600000e-83 318.0
49 TraesCS2A01G002600 chr3A 80.365 438 64 12 2365 2793 34475909 34475485 2.140000e-81 313.0
50 TraesCS2A01G002600 chr3D 86.873 518 55 9 1080 1585 10455618 10456134 4.140000e-158 568.0
51 TraesCS2A01G002600 chr3D 74.634 205 39 7 2619 2811 604705089 604705292 8.500000e-11 78.7
52 TraesCS2A01G002600 chr3D 74.634 205 39 7 2619 2811 604747026 604746823 8.500000e-11 78.7
53 TraesCS2A01G002600 chr6D 96.564 291 7 2 415 703 36066707 36066996 2.000000e-131 479.0
54 TraesCS2A01G002600 chr6A 96.564 291 7 3 415 703 575466012 575465723 2.000000e-131 479.0
55 TraesCS2A01G002600 chr6A 83.103 290 40 7 798 1081 25065579 25065865 3.660000e-64 255.0
56 TraesCS2A01G002600 chr1A 96.774 248 8 0 1634 1881 96737762 96737515 5.710000e-112 414.0
57 TraesCS2A01G002600 chr1A 96.371 248 9 0 1634 1881 515151613 515151366 2.660000e-110 409.0
58 TraesCS2A01G002600 chr1A 95.968 248 10 0 1634 1881 514895386 514895139 1.240000e-108 403.0
59 TraesCS2A01G002600 chr4B 79.710 483 77 13 2323 2801 339481710 339482175 2.130000e-86 329.0
60 TraesCS2A01G002600 chr7D 100.000 56 0 0 751 806 48465403 48465458 1.400000e-18 104.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G002600 chr2A 1607580 1610442 2862 False 1286.4 5288 85.69280 1 2863 5 chr2A.!!$F2 2862
1 TraesCS2A01G002600 chr2A 718383131 718383662 531 True 773.0 773 93.23300 1076 1595 1 chr2A.!!$R1 519
2 TraesCS2A01G002600 chr2A 453506400 453510068 3668 True 489.5 571 86.95025 1884 2845 4 chr2A.!!$R3 961
3 TraesCS2A01G002600 chr2D 646461438 646462543 1105 True 1687.0 1687 94.49500 795 1881 1 chr2D.!!$R3 1086
4 TraesCS2A01G002600 chr2D 584256169 584256723 554 True 797.0 797 92.98600 1080 1620 1 chr2D.!!$R1 540
5 TraesCS2A01G002600 chrUn 337092058 337093146 1088 False 1640.0 1640 93.97800 798 1881 1 chrUn.!!$F1 1083
6 TraesCS2A01G002600 chr5A 219244250 219247843 3593 False 733.5 1038 92.42250 743 1881 2 chr5A.!!$F2 1138
7 TraesCS2A01G002600 chr5A 46012428 46014916 2488 False 429.5 1011 88.92450 1985 2863 4 chr5A.!!$F1 878
8 TraesCS2A01G002600 chr5A 648954647 648955196 549 False 429.0 691 92.28500 1 848 2 chr5A.!!$F3 847
9 TraesCS2A01G002600 chr2B 703622603 703623152 549 True 765.0 765 92.19600 1080 1615 1 chr2B.!!$R1 535
10 TraesCS2A01G002600 chr7B 149529160 149529673 513 False 415.5 675 94.69050 1 809 2 chr7B.!!$F1 808
11 TraesCS2A01G002600 chr3B 26751724 26752243 519 True 595.0 595 87.71600 1080 1588 1 chr3B.!!$R3 508
12 TraesCS2A01G002600 chr3B 14524442 14524961 519 True 579.0 579 87.14000 1080 1588 1 chr3B.!!$R2 508
13 TraesCS2A01G002600 chr3A 16632267 16632783 516 False 573.0 573 87.06600 1080 1585 1 chr3A.!!$F1 505
14 TraesCS2A01G002600 chr3A 34475392 34475909 517 True 315.5 318 80.22850 2365 2801 2 chr3A.!!$R2 436
15 TraesCS2A01G002600 chr3D 10455618 10456134 516 False 568.0 568 86.87300 1080 1585 1 chr3D.!!$F1 505

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
332 335 0.107459 GGGAGAAGGGCAGATGTGTC 60.107 60.0 0.0 0.0 0.0 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1899 4407 0.179062 GGCTGGGCATCAGTAGTCAG 60.179 60.0 7.89 0.0 45.08 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
67 68 3.585289 TGCTACCTTGGTTCCATACAAGA 59.415 43.478 6.02 0.00 45.22 3.02
131 134 3.324993 GACAGAACTCCAAGCTCTTCAG 58.675 50.000 0.00 0.00 0.00 3.02
275 278 3.234730 GTCGCGGGGGAGGATGAT 61.235 66.667 6.13 0.00 0.00 2.45
276 279 2.917751 TCGCGGGGGAGGATGATC 60.918 66.667 6.13 0.00 0.00 2.92
277 280 4.008933 CGCGGGGGAGGATGATCC 62.009 72.222 2.46 2.46 38.76 3.36
278 281 2.849162 GCGGGGGAGGATGATCCA 60.849 66.667 14.90 0.00 41.52 3.41
279 282 2.452064 GCGGGGGAGGATGATCCAA 61.452 63.158 14.90 0.00 41.52 3.53
280 283 1.994885 GCGGGGGAGGATGATCCAAA 61.995 60.000 14.90 0.00 41.52 3.28
281 284 0.109342 CGGGGGAGGATGATCCAAAG 59.891 60.000 14.90 0.00 41.52 2.77
282 285 1.226311 GGGGGAGGATGATCCAAAGT 58.774 55.000 14.90 0.00 41.52 2.66
283 286 1.570979 GGGGGAGGATGATCCAAAGTT 59.429 52.381 14.90 0.00 41.52 2.66
284 287 2.423517 GGGGGAGGATGATCCAAAGTTC 60.424 54.545 14.90 1.53 41.52 3.01
285 288 2.423517 GGGGAGGATGATCCAAAGTTCC 60.424 54.545 14.90 10.95 41.52 3.62
286 289 2.511637 GGGAGGATGATCCAAAGTTCCT 59.488 50.000 14.90 0.00 41.52 3.36
287 290 3.549794 GGAGGATGATCCAAAGTTCCTG 58.450 50.000 14.90 0.00 39.61 3.86
288 291 3.054065 GGAGGATGATCCAAAGTTCCTGT 60.054 47.826 14.90 0.00 39.61 4.00
289 292 3.944015 GAGGATGATCCAAAGTTCCTGTG 59.056 47.826 14.90 0.00 39.61 3.66
290 293 3.019564 GGATGATCCAAAGTTCCTGTGG 58.980 50.000 6.60 0.00 40.12 4.17
291 294 3.562176 GGATGATCCAAAGTTCCTGTGGT 60.562 47.826 6.60 0.00 39.74 4.16
292 295 2.862541 TGATCCAAAGTTCCTGTGGTG 58.137 47.619 0.51 0.00 39.74 4.17
293 296 2.162681 GATCCAAAGTTCCTGTGGTGG 58.837 52.381 0.51 0.00 39.74 4.61
294 297 1.217916 TCCAAAGTTCCTGTGGTGGA 58.782 50.000 0.51 0.00 39.74 4.02
295 298 1.142870 TCCAAAGTTCCTGTGGTGGAG 59.857 52.381 0.51 0.00 39.74 3.86
296 299 1.609208 CAAAGTTCCTGTGGTGGAGG 58.391 55.000 0.00 0.00 37.43 4.30
297 300 0.478507 AAAGTTCCTGTGGTGGAGGG 59.521 55.000 0.00 0.00 37.43 4.30
298 301 0.697854 AAGTTCCTGTGGTGGAGGGT 60.698 55.000 0.00 0.00 37.43 4.34
299 302 1.073199 GTTCCTGTGGTGGAGGGTG 59.927 63.158 0.00 0.00 37.43 4.61
300 303 2.153401 TTCCTGTGGTGGAGGGTGG 61.153 63.158 0.00 0.00 37.43 4.61
301 304 2.529136 CCTGTGGTGGAGGGTGGA 60.529 66.667 0.00 0.00 0.00 4.02
302 305 2.153401 CCTGTGGTGGAGGGTGGAA 61.153 63.158 0.00 0.00 0.00 3.53
303 306 1.500783 CCTGTGGTGGAGGGTGGAAT 61.501 60.000 0.00 0.00 0.00 3.01
304 307 0.405585 CTGTGGTGGAGGGTGGAATT 59.594 55.000 0.00 0.00 0.00 2.17
305 308 0.112218 TGTGGTGGAGGGTGGAATTG 59.888 55.000 0.00 0.00 0.00 2.32
306 309 1.076549 TGGTGGAGGGTGGAATTGC 59.923 57.895 0.00 0.00 0.00 3.56
307 310 1.384191 GGTGGAGGGTGGAATTGCT 59.616 57.895 0.00 0.00 0.00 3.91
308 311 0.681243 GGTGGAGGGTGGAATTGCTC 60.681 60.000 0.00 0.00 0.00 4.26
309 312 0.329596 GTGGAGGGTGGAATTGCTCT 59.670 55.000 0.00 0.00 0.00 4.09
310 313 1.559682 GTGGAGGGTGGAATTGCTCTA 59.440 52.381 0.00 0.00 0.00 2.43
311 314 1.839994 TGGAGGGTGGAATTGCTCTAG 59.160 52.381 0.00 0.00 0.00 2.43
312 315 1.475930 GGAGGGTGGAATTGCTCTAGC 60.476 57.143 0.00 0.00 42.50 3.42
313 316 0.179000 AGGGTGGAATTGCTCTAGCG 59.821 55.000 0.00 0.00 45.83 4.26
314 317 0.815615 GGGTGGAATTGCTCTAGCGG 60.816 60.000 0.00 0.00 45.83 5.52
315 318 0.815615 GGTGGAATTGCTCTAGCGGG 60.816 60.000 0.00 0.00 45.83 6.13
316 319 0.178068 GTGGAATTGCTCTAGCGGGA 59.822 55.000 0.00 0.00 45.83 5.14
317 320 0.465705 TGGAATTGCTCTAGCGGGAG 59.534 55.000 0.00 4.91 45.83 4.30
318 321 0.753262 GGAATTGCTCTAGCGGGAGA 59.247 55.000 12.04 0.18 45.83 3.71
319 322 1.139058 GGAATTGCTCTAGCGGGAGAA 59.861 52.381 12.04 0.00 45.83 2.87
320 323 2.478831 GAATTGCTCTAGCGGGAGAAG 58.521 52.381 12.04 0.00 45.83 2.85
321 324 0.755686 ATTGCTCTAGCGGGAGAAGG 59.244 55.000 12.04 0.00 45.83 3.46
322 325 1.330655 TTGCTCTAGCGGGAGAAGGG 61.331 60.000 12.04 0.00 45.83 3.95
323 326 3.133946 CTCTAGCGGGAGAAGGGC 58.866 66.667 3.41 0.00 35.52 5.19
324 327 1.758514 CTCTAGCGGGAGAAGGGCA 60.759 63.158 3.41 0.00 35.52 5.36
325 328 1.743321 CTCTAGCGGGAGAAGGGCAG 61.743 65.000 3.41 0.00 35.52 4.85
326 329 1.758514 CTAGCGGGAGAAGGGCAGA 60.759 63.158 0.00 0.00 0.00 4.26
327 330 1.075226 TAGCGGGAGAAGGGCAGAT 60.075 57.895 0.00 0.00 0.00 2.90
328 331 1.402896 TAGCGGGAGAAGGGCAGATG 61.403 60.000 0.00 0.00 0.00 2.90
329 332 3.036429 GCGGGAGAAGGGCAGATGT 62.036 63.158 0.00 0.00 0.00 3.06
330 333 1.153289 CGGGAGAAGGGCAGATGTG 60.153 63.158 0.00 0.00 0.00 3.21
331 334 1.903877 CGGGAGAAGGGCAGATGTGT 61.904 60.000 0.00 0.00 0.00 3.72
332 335 0.107459 GGGAGAAGGGCAGATGTGTC 60.107 60.000 0.00 0.00 0.00 3.67
333 336 0.908198 GGAGAAGGGCAGATGTGTCT 59.092 55.000 0.00 0.00 34.14 3.41
334 337 1.280421 GGAGAAGGGCAGATGTGTCTT 59.720 52.381 0.00 0.00 30.42 3.01
335 338 2.354259 GAGAAGGGCAGATGTGTCTTG 58.646 52.381 0.00 0.00 30.42 3.02
336 339 0.807496 GAAGGGCAGATGTGTCTTGC 59.193 55.000 0.00 0.00 30.42 4.01
337 340 0.111061 AAGGGCAGATGTGTCTTGCA 59.889 50.000 0.00 0.00 33.17 4.08
338 341 0.330604 AGGGCAGATGTGTCTTGCAT 59.669 50.000 0.00 0.00 33.17 3.96
339 342 1.180029 GGGCAGATGTGTCTTGCATT 58.820 50.000 0.00 0.00 33.17 3.56
340 343 2.025981 AGGGCAGATGTGTCTTGCATTA 60.026 45.455 0.00 0.00 33.17 1.90
341 344 2.098117 GGGCAGATGTGTCTTGCATTAC 59.902 50.000 0.00 0.00 33.17 1.89
342 345 3.012518 GGCAGATGTGTCTTGCATTACT 58.987 45.455 0.00 0.00 33.17 2.24
343 346 3.181503 GGCAGATGTGTCTTGCATTACTG 60.182 47.826 0.00 0.00 33.17 2.74
344 347 3.730061 GCAGATGTGTCTTGCATTACTGC 60.730 47.826 0.00 0.00 39.85 4.40
345 348 3.688185 CAGATGTGTCTTGCATTACTGCT 59.312 43.478 6.62 0.00 40.01 4.24
346 349 4.436986 CAGATGTGTCTTGCATTACTGCTG 60.437 45.833 6.62 0.10 40.01 4.41
347 350 7.376887 CAGATGTGTCTTGCATTACTGCTGG 62.377 48.000 6.62 0.00 40.01 4.85
352 355 4.617875 GCATTACTGCTGGGACGT 57.382 55.556 0.00 0.00 45.32 4.34
353 356 2.384203 GCATTACTGCTGGGACGTC 58.616 57.895 7.13 7.13 45.32 4.34
354 357 1.421410 GCATTACTGCTGGGACGTCG 61.421 60.000 9.92 0.00 45.32 5.12
355 358 1.153628 ATTACTGCTGGGACGTCGC 60.154 57.895 24.41 24.41 0.00 5.19
356 359 2.884087 ATTACTGCTGGGACGTCGCG 62.884 60.000 25.18 20.20 0.00 5.87
371 374 3.188786 GCGGGCGTGTCTCACATC 61.189 66.667 1.00 0.00 33.40 3.06
372 375 2.880879 CGGGCGTGTCTCACATCG 60.881 66.667 1.00 0.00 33.40 3.84
373 376 3.188786 GGGCGTGTCTCACATCGC 61.189 66.667 12.28 12.28 42.99 4.58
374 377 2.432456 GGCGTGTCTCACATCGCA 60.432 61.111 18.47 0.00 44.34 5.10
375 378 2.447887 GGCGTGTCTCACATCGCAG 61.448 63.158 18.47 0.00 44.34 5.18
376 379 3.075998 CGTGTCTCACATCGCAGC 58.924 61.111 1.00 0.00 33.40 5.25
377 380 2.447887 CGTGTCTCACATCGCAGCC 61.448 63.158 1.00 0.00 33.40 4.85
378 381 1.374631 GTGTCTCACATCGCAGCCA 60.375 57.895 0.00 0.00 34.08 4.75
379 382 0.742281 GTGTCTCACATCGCAGCCAT 60.742 55.000 0.00 0.00 34.08 4.40
380 383 0.741927 TGTCTCACATCGCAGCCATG 60.742 55.000 0.00 0.00 0.00 3.66
381 384 1.153309 TCTCACATCGCAGCCATGG 60.153 57.895 7.63 7.63 0.00 3.66
382 385 1.450848 CTCACATCGCAGCCATGGT 60.451 57.895 14.67 0.00 0.00 3.55
383 386 1.712018 CTCACATCGCAGCCATGGTG 61.712 60.000 14.67 11.47 0.00 4.17
384 387 2.438975 ACATCGCAGCCATGGTGG 60.439 61.111 14.67 7.03 41.55 4.61
385 388 3.214123 CATCGCAGCCATGGTGGG 61.214 66.667 14.67 17.33 43.58 4.61
386 389 4.511246 ATCGCAGCCATGGTGGGG 62.511 66.667 22.21 18.19 42.71 4.96
389 392 3.384532 GCAGCCATGGTGGGGTTG 61.385 66.667 14.67 4.13 38.19 3.77
390 393 2.118076 CAGCCATGGTGGGGTTGT 59.882 61.111 14.67 0.00 38.19 3.32
391 394 1.533753 CAGCCATGGTGGGGTTGTT 60.534 57.895 14.67 0.00 38.19 2.83
392 395 1.120795 CAGCCATGGTGGGGTTGTTT 61.121 55.000 14.67 0.00 38.19 2.83
393 396 0.485099 AGCCATGGTGGGGTTGTTTA 59.515 50.000 14.67 0.00 38.19 2.01
394 397 0.606096 GCCATGGTGGGGTTGTTTAC 59.394 55.000 14.67 0.00 38.19 2.01
395 398 2.002505 CCATGGTGGGGTTGTTTACA 57.997 50.000 2.57 0.00 32.67 2.41
396 399 1.616374 CCATGGTGGGGTTGTTTACAC 59.384 52.381 2.57 0.00 32.67 2.90
397 400 2.311463 CATGGTGGGGTTGTTTACACA 58.689 47.619 0.00 0.00 35.62 3.72
398 401 1.765230 TGGTGGGGTTGTTTACACAC 58.235 50.000 0.00 0.00 36.20 3.82
399 402 1.005569 TGGTGGGGTTGTTTACACACA 59.994 47.619 0.00 0.00 37.69 3.72
400 403 2.100989 GGTGGGGTTGTTTACACACAA 58.899 47.619 0.00 0.00 37.69 3.33
401 404 2.696187 GGTGGGGTTGTTTACACACAAT 59.304 45.455 0.00 0.00 38.89 2.71
402 405 3.133183 GGTGGGGTTGTTTACACACAATT 59.867 43.478 0.00 0.00 38.89 2.32
403 406 4.116238 GTGGGGTTGTTTACACACAATTG 58.884 43.478 3.24 3.24 38.89 2.32
404 407 3.133003 TGGGGTTGTTTACACACAATTGG 59.867 43.478 10.83 1.35 38.89 3.16
405 408 3.127589 GGGTTGTTTACACACAATTGGC 58.872 45.455 10.83 0.00 38.89 4.52
406 409 3.430929 GGGTTGTTTACACACAATTGGCA 60.431 43.478 10.83 0.00 38.89 4.92
407 410 3.801594 GGTTGTTTACACACAATTGGCAG 59.198 43.478 10.83 1.85 38.89 4.85
408 411 4.429108 GTTGTTTACACACAATTGGCAGT 58.571 39.130 10.83 7.22 38.89 4.40
409 412 4.300189 TGTTTACACACAATTGGCAGTC 57.700 40.909 10.83 0.00 0.00 3.51
410 413 3.067461 TGTTTACACACAATTGGCAGTCC 59.933 43.478 10.83 0.00 0.00 3.85
411 414 2.949177 TACACACAATTGGCAGTCCT 57.051 45.000 10.83 0.00 0.00 3.85
412 415 1.321474 ACACACAATTGGCAGTCCTG 58.679 50.000 10.83 0.00 0.00 3.86
422 425 4.850193 CAGTCCTGCCCATGGTTT 57.150 55.556 11.73 0.00 0.00 3.27
423 426 3.056213 CAGTCCTGCCCATGGTTTT 57.944 52.632 11.73 0.00 0.00 2.43
424 427 0.890683 CAGTCCTGCCCATGGTTTTC 59.109 55.000 11.73 0.00 0.00 2.29
425 428 0.482446 AGTCCTGCCCATGGTTTTCA 59.518 50.000 11.73 2.17 0.00 2.69
426 429 0.603065 GTCCTGCCCATGGTTTTCAC 59.397 55.000 11.73 0.00 0.00 3.18
427 430 0.482446 TCCTGCCCATGGTTTTCACT 59.518 50.000 11.73 0.00 0.00 3.41
428 431 1.133199 TCCTGCCCATGGTTTTCACTT 60.133 47.619 11.73 0.00 0.00 3.16
429 432 1.693606 CCTGCCCATGGTTTTCACTTT 59.306 47.619 11.73 0.00 0.00 2.66
430 433 2.289010 CCTGCCCATGGTTTTCACTTTC 60.289 50.000 11.73 0.00 0.00 2.62
431 434 2.364970 CTGCCCATGGTTTTCACTTTCA 59.635 45.455 11.73 0.00 0.00 2.69
432 435 2.364970 TGCCCATGGTTTTCACTTTCAG 59.635 45.455 11.73 0.00 0.00 3.02
433 436 2.365293 GCCCATGGTTTTCACTTTCAGT 59.635 45.455 11.73 0.00 0.00 3.41
446 449 4.336889 ACTTTCAGTGAGATTTCGGTGA 57.663 40.909 0.00 0.00 0.00 4.02
447 450 4.703897 ACTTTCAGTGAGATTTCGGTGAA 58.296 39.130 0.00 0.00 0.00 3.18
448 451 5.123227 ACTTTCAGTGAGATTTCGGTGAAA 58.877 37.500 10.55 10.55 36.26 2.69
449 452 5.765182 ACTTTCAGTGAGATTTCGGTGAAAT 59.235 36.000 11.13 4.54 43.77 2.17
450 453 6.263168 ACTTTCAGTGAGATTTCGGTGAAATT 59.737 34.615 11.13 5.67 41.56 1.82
451 454 5.862924 TCAGTGAGATTTCGGTGAAATTC 57.137 39.130 6.26 6.79 41.56 2.17
452 455 5.304778 TCAGTGAGATTTCGGTGAAATTCA 58.695 37.500 6.26 8.76 41.56 2.57
453 456 5.179368 TCAGTGAGATTTCGGTGAAATTCAC 59.821 40.000 17.16 17.16 46.23 3.18
454 457 5.180117 CAGTGAGATTTCGGTGAAATTCACT 59.820 40.000 23.30 24.62 46.05 3.41
478 481 7.509141 TGAATTTCAGTAATTTCAGCAGACA 57.491 32.000 0.00 0.00 36.59 3.41
479 482 7.362662 TGAATTTCAGTAATTTCAGCAGACAC 58.637 34.615 0.00 0.00 36.59 3.67
480 483 7.229306 TGAATTTCAGTAATTTCAGCAGACACT 59.771 33.333 0.00 0.00 36.59 3.55
481 484 5.929697 TTCAGTAATTTCAGCAGACACTG 57.070 39.130 0.00 0.00 39.12 3.66
482 485 5.213891 TCAGTAATTTCAGCAGACACTGA 57.786 39.130 2.81 7.52 44.84 3.41
492 495 5.720202 TCAGCAGACACTGAAATATTACGT 58.280 37.500 2.81 0.00 43.59 3.57
493 496 6.163476 TCAGCAGACACTGAAATATTACGTT 58.837 36.000 0.00 0.00 43.59 3.99
494 497 6.649141 TCAGCAGACACTGAAATATTACGTTT 59.351 34.615 0.00 0.00 43.59 3.60
495 498 6.955963 CAGCAGACACTGAAATATTACGTTTC 59.044 38.462 0.00 0.00 40.25 2.78
496 499 5.952064 GCAGACACTGAAATATTACGTTTCG 59.048 40.000 0.00 0.00 38.18 3.46
497 500 6.466812 CAGACACTGAAATATTACGTTTCGG 58.533 40.000 0.00 0.00 43.98 4.30
498 501 5.063060 AGACACTGAAATATTACGTTTCGGC 59.937 40.000 0.00 0.00 42.81 5.54
499 502 4.093850 ACACTGAAATATTACGTTTCGGCC 59.906 41.667 0.00 0.00 42.81 6.13
500 503 4.093703 CACTGAAATATTACGTTTCGGCCA 59.906 41.667 2.24 0.00 42.81 5.36
501 504 4.696402 ACTGAAATATTACGTTTCGGCCAA 59.304 37.500 2.24 0.00 42.81 4.52
502 505 5.181622 ACTGAAATATTACGTTTCGGCCAAA 59.818 36.000 2.24 0.00 42.81 3.28
503 506 6.010294 TGAAATATTACGTTTCGGCCAAAA 57.990 33.333 2.24 0.00 38.18 2.44
504 507 6.622549 TGAAATATTACGTTTCGGCCAAAAT 58.377 32.000 2.24 0.00 38.18 1.82
505 508 7.759465 TGAAATATTACGTTTCGGCCAAAATA 58.241 30.769 2.24 0.00 38.18 1.40
506 509 8.407064 TGAAATATTACGTTTCGGCCAAAATAT 58.593 29.630 2.24 1.02 38.18 1.28
507 510 9.240159 GAAATATTACGTTTCGGCCAAAATATT 57.760 29.630 2.24 6.54 32.32 1.28
508 511 9.589111 AAATATTACGTTTCGGCCAAAATATTT 57.411 25.926 2.24 11.26 35.11 1.40
509 512 9.589111 AATATTACGTTTCGGCCAAAATATTTT 57.411 25.926 7.64 7.64 28.60 1.82
511 514 8.623310 ATTACGTTTCGGCCAAAATATTTTAG 57.377 30.769 12.98 7.50 0.00 1.85
512 515 4.860352 ACGTTTCGGCCAAAATATTTTAGC 59.140 37.500 19.28 19.28 34.69 3.09
513 516 4.859798 CGTTTCGGCCAAAATATTTTAGCA 59.140 37.500 25.70 9.62 36.68 3.49
514 517 5.346281 CGTTTCGGCCAAAATATTTTAGCAA 59.654 36.000 25.70 14.01 36.68 3.91
515 518 6.035542 CGTTTCGGCCAAAATATTTTAGCAAT 59.964 34.615 25.70 0.00 36.68 3.56
516 519 7.412455 CGTTTCGGCCAAAATATTTTAGCAATT 60.412 33.333 25.70 0.00 36.68 2.32
517 520 7.913674 TTCGGCCAAAATATTTTAGCAATTT 57.086 28.000 25.70 0.00 36.68 1.82
518 521 7.532682 TCGGCCAAAATATTTTAGCAATTTC 57.467 32.000 25.70 11.94 36.68 2.17
519 522 7.099764 TCGGCCAAAATATTTTAGCAATTTCA 58.900 30.769 25.70 6.42 36.68 2.69
520 523 7.604164 TCGGCCAAAATATTTTAGCAATTTCAA 59.396 29.630 25.70 6.56 36.68 2.69
521 524 8.397148 CGGCCAAAATATTTTAGCAATTTCAAT 58.603 29.630 25.70 0.00 36.68 2.57
532 535 9.920133 TTTTAGCAATTTCAATATAGCACAACA 57.080 25.926 0.00 0.00 0.00 3.33
533 536 9.920133 TTTAGCAATTTCAATATAGCACAACAA 57.080 25.926 0.00 0.00 0.00 2.83
536 539 9.090692 AGCAATTTCAATATAGCACAACAATTC 57.909 29.630 0.00 0.00 0.00 2.17
537 540 8.330302 GCAATTTCAATATAGCACAACAATTCC 58.670 33.333 0.00 0.00 0.00 3.01
538 541 9.368674 CAATTTCAATATAGCACAACAATTCCA 57.631 29.630 0.00 0.00 0.00 3.53
539 542 9.941325 AATTTCAATATAGCACAACAATTCCAA 57.059 25.926 0.00 0.00 0.00 3.53
548 551 9.941325 ATAGCACAACAATTCCAATATTTTTCA 57.059 25.926 0.00 0.00 0.00 2.69
549 552 8.674263 AGCACAACAATTCCAATATTTTTCAA 57.326 26.923 0.00 0.00 0.00 2.69
550 553 9.287373 AGCACAACAATTCCAATATTTTTCAAT 57.713 25.926 0.00 0.00 0.00 2.57
551 554 9.896263 GCACAACAATTCCAATATTTTTCAATT 57.104 25.926 0.00 0.00 0.00 2.32
602 605 9.573133 AATTGAATTCAAGTGAATATTTCGGTC 57.427 29.630 24.17 0.85 43.41 4.79
603 606 7.680442 TGAATTCAAGTGAATATTTCGGTCA 57.320 32.000 5.45 3.23 43.41 4.02
604 607 8.279970 TGAATTCAAGTGAATATTTCGGTCAT 57.720 30.769 5.45 0.00 43.41 3.06
605 608 8.739039 TGAATTCAAGTGAATATTTCGGTCATT 58.261 29.630 5.45 0.00 43.41 2.57
606 609 9.573133 GAATTCAAGTGAATATTTCGGTCATTT 57.427 29.630 6.95 0.00 43.41 2.32
607 610 8.915871 ATTCAAGTGAATATTTCGGTCATTTG 57.084 30.769 4.71 4.16 42.48 2.32
608 611 6.851609 TCAAGTGAATATTTCGGTCATTTGG 58.148 36.000 8.75 0.00 38.68 3.28
609 612 5.248870 AGTGAATATTTCGGTCATTTGGC 57.751 39.130 0.00 0.00 0.00 4.52
610 613 4.949856 AGTGAATATTTCGGTCATTTGGCT 59.050 37.500 0.00 0.00 0.00 4.75
611 614 5.036737 GTGAATATTTCGGTCATTTGGCTG 58.963 41.667 0.00 0.00 0.00 4.85
612 615 4.946772 TGAATATTTCGGTCATTTGGCTGA 59.053 37.500 0.00 0.00 32.40 4.26
613 616 5.417266 TGAATATTTCGGTCATTTGGCTGAA 59.583 36.000 2.35 2.35 42.66 3.02
616 619 3.911868 TTTCGGTCATTTGGCTGAAATG 58.088 40.909 13.66 12.79 46.47 2.32
617 620 3.305950 TTTCGGTCATTTGGCTGAAATGG 60.306 43.478 13.66 6.22 46.47 3.16
618 621 5.531829 TTTCGGTCATTTGGCTGAAATGGA 61.532 41.667 13.66 7.83 46.47 3.41
619 622 6.962304 TTTCGGTCATTTGGCTGAAATGGAA 61.962 40.000 13.66 11.66 46.47 3.53
620 623 8.359821 TTTCGGTCATTTGGCTGAAATGGAAA 62.360 38.462 13.66 15.05 46.47 3.13
624 627 4.885413 CATTTGGCTGAAATGGAAACTGA 58.115 39.130 11.68 0.00 45.06 3.41
625 628 5.299148 CATTTGGCTGAAATGGAAACTGAA 58.701 37.500 11.68 0.00 45.06 3.02
626 629 5.350504 TTTGGCTGAAATGGAAACTGAAA 57.649 34.783 0.00 0.00 0.00 2.69
627 630 5.549742 TTGGCTGAAATGGAAACTGAAAT 57.450 34.783 0.00 0.00 0.00 2.17
628 631 5.138125 TGGCTGAAATGGAAACTGAAATC 57.862 39.130 0.00 0.00 0.00 2.17
629 632 4.588106 TGGCTGAAATGGAAACTGAAATCA 59.412 37.500 0.00 0.00 0.00 2.57
630 633 4.925646 GGCTGAAATGGAAACTGAAATCAC 59.074 41.667 0.00 0.00 0.00 3.06
631 634 5.279156 GGCTGAAATGGAAACTGAAATCACT 60.279 40.000 0.00 0.00 0.00 3.41
632 635 5.632347 GCTGAAATGGAAACTGAAATCACTG 59.368 40.000 0.00 0.00 0.00 3.66
633 636 6.515531 GCTGAAATGGAAACTGAAATCACTGA 60.516 38.462 0.00 0.00 0.00 3.41
634 637 7.345422 TGAAATGGAAACTGAAATCACTGAA 57.655 32.000 0.00 0.00 0.00 3.02
635 638 7.780064 TGAAATGGAAACTGAAATCACTGAAA 58.220 30.769 0.00 0.00 0.00 2.69
636 639 8.423349 TGAAATGGAAACTGAAATCACTGAAAT 58.577 29.630 0.00 0.00 0.00 2.17
637 640 9.912634 GAAATGGAAACTGAAATCACTGAAATA 57.087 29.630 0.00 0.00 0.00 1.40
638 641 9.696917 AAATGGAAACTGAAATCACTGAAATAC 57.303 29.630 0.00 0.00 0.00 1.89
639 642 7.815840 TGGAAACTGAAATCACTGAAATACA 57.184 32.000 0.00 0.00 0.00 2.29
640 643 7.648142 TGGAAACTGAAATCACTGAAATACAC 58.352 34.615 0.00 0.00 0.00 2.90
641 644 7.502226 TGGAAACTGAAATCACTGAAATACACT 59.498 33.333 0.00 0.00 0.00 3.55
642 645 7.805071 GGAAACTGAAATCACTGAAATACACTG 59.195 37.037 0.00 0.00 0.00 3.66
643 646 8.450578 AAACTGAAATCACTGAAATACACTGA 57.549 30.769 0.00 0.00 0.00 3.41
644 647 8.450578 AACTGAAATCACTGAAATACACTGAA 57.549 30.769 0.00 0.00 0.00 3.02
645 648 8.627208 ACTGAAATCACTGAAATACACTGAAT 57.373 30.769 0.00 0.00 0.00 2.57
646 649 9.071276 ACTGAAATCACTGAAATACACTGAATT 57.929 29.630 0.00 0.00 0.00 2.17
647 650 9.903682 CTGAAATCACTGAAATACACTGAATTT 57.096 29.630 0.00 0.00 0.00 1.82
648 651 9.897744 TGAAATCACTGAAATACACTGAATTTC 57.102 29.630 2.38 2.38 41.60 2.17
649 652 9.897744 GAAATCACTGAAATACACTGAATTTCA 57.102 29.630 10.00 10.00 46.08 2.69
663 666 5.119931 TGAATTTCAGTGATTTCGGTTGG 57.880 39.130 0.00 0.00 0.00 3.77
664 667 4.582656 TGAATTTCAGTGATTTCGGTTGGT 59.417 37.500 0.00 0.00 0.00 3.67
665 668 3.980646 TTTCAGTGATTTCGGTTGGTG 57.019 42.857 0.00 0.00 0.00 4.17
666 669 1.234821 TCAGTGATTTCGGTTGGTGC 58.765 50.000 0.00 0.00 0.00 5.01
667 670 1.202758 TCAGTGATTTCGGTTGGTGCT 60.203 47.619 0.00 0.00 0.00 4.40
668 671 1.069022 CAGTGATTTCGGTTGGTGCTG 60.069 52.381 0.00 0.00 0.00 4.41
669 672 1.202758 AGTGATTTCGGTTGGTGCTGA 60.203 47.619 0.00 0.00 0.00 4.26
670 673 1.606668 GTGATTTCGGTTGGTGCTGAA 59.393 47.619 0.00 0.00 32.46 3.02
671 674 2.034053 GTGATTTCGGTTGGTGCTGAAA 59.966 45.455 3.06 3.06 44.68 2.69
674 677 3.810310 TTTCGGTTGGTGCTGAAATTT 57.190 38.095 0.00 0.00 38.41 1.82
675 678 3.810310 TTCGGTTGGTGCTGAAATTTT 57.190 38.095 0.00 0.00 31.49 1.82
676 679 3.810310 TCGGTTGGTGCTGAAATTTTT 57.190 38.095 0.00 0.00 0.00 1.94
677 680 3.712187 TCGGTTGGTGCTGAAATTTTTC 58.288 40.909 0.00 0.00 37.69 2.29
678 681 3.383185 TCGGTTGGTGCTGAAATTTTTCT 59.617 39.130 4.80 0.00 38.02 2.52
679 682 3.735746 CGGTTGGTGCTGAAATTTTTCTC 59.264 43.478 4.80 0.00 38.02 2.87
680 683 4.692228 GGTTGGTGCTGAAATTTTTCTCA 58.308 39.130 4.80 0.89 38.02 3.27
681 684 5.115480 GGTTGGTGCTGAAATTTTTCTCAA 58.885 37.500 4.80 0.00 38.02 3.02
682 685 5.584251 GGTTGGTGCTGAAATTTTTCTCAAA 59.416 36.000 4.80 0.00 38.02 2.69
683 686 6.456853 GGTTGGTGCTGAAATTTTTCTCAAAC 60.457 38.462 4.80 5.36 38.02 2.93
684 687 5.976458 TGGTGCTGAAATTTTTCTCAAACT 58.024 33.333 4.80 0.00 38.02 2.66
685 688 5.811613 TGGTGCTGAAATTTTTCTCAAACTG 59.188 36.000 4.80 0.00 38.02 3.16
686 689 6.042143 GGTGCTGAAATTTTTCTCAAACTGA 58.958 36.000 4.80 0.00 38.02 3.41
687 690 6.534793 GGTGCTGAAATTTTTCTCAAACTGAA 59.465 34.615 4.80 0.00 38.02 3.02
688 691 7.064490 GGTGCTGAAATTTTTCTCAAACTGAAA 59.936 33.333 4.80 0.00 38.02 2.69
689 692 8.606602 GTGCTGAAATTTTTCTCAAACTGAAAT 58.393 29.630 4.80 0.00 38.02 2.17
690 693 9.165035 TGCTGAAATTTTTCTCAAACTGAAATT 57.835 25.926 4.80 0.00 38.02 1.82
691 694 9.429600 GCTGAAATTTTTCTCAAACTGAAATTG 57.570 29.630 4.80 0.00 38.02 2.32
698 701 8.839310 TTTTCTCAAACTGAAATTGAAAACCA 57.161 26.923 0.00 0.00 36.43 3.67
699 702 9.447157 TTTTCTCAAACTGAAATTGAAAACCAT 57.553 25.926 0.00 0.00 36.43 3.55
700 703 8.422973 TTCTCAAACTGAAATTGAAAACCATG 57.577 30.769 0.00 0.00 36.43 3.66
701 704 6.985645 TCTCAAACTGAAATTGAAAACCATGG 59.014 34.615 11.19 11.19 36.43 3.66
702 705 6.648192 TCAAACTGAAATTGAAAACCATGGT 58.352 32.000 13.00 13.00 34.04 3.55
703 706 6.760770 TCAAACTGAAATTGAAAACCATGGTC 59.239 34.615 20.07 6.47 34.04 4.02
704 707 5.213891 ACTGAAATTGAAAACCATGGTCC 57.786 39.130 20.07 11.20 0.00 4.46
705 708 4.901250 ACTGAAATTGAAAACCATGGTCCT 59.099 37.500 20.07 8.26 0.00 3.85
706 709 6.074648 ACTGAAATTGAAAACCATGGTCCTA 58.925 36.000 20.07 8.08 0.00 2.94
707 710 6.015434 ACTGAAATTGAAAACCATGGTCCTAC 60.015 38.462 20.07 10.75 0.00 3.18
708 711 5.245075 TGAAATTGAAAACCATGGTCCTACC 59.755 40.000 20.07 6.79 39.22 3.18
709 712 4.675063 ATTGAAAACCATGGTCCTACCT 57.325 40.909 20.07 0.00 39.58 3.08
710 713 5.789574 ATTGAAAACCATGGTCCTACCTA 57.210 39.130 20.07 3.80 39.58 3.08
711 714 5.586155 TTGAAAACCATGGTCCTACCTAA 57.414 39.130 20.07 4.90 39.58 2.69
712 715 5.174037 TGAAAACCATGGTCCTACCTAAG 57.826 43.478 20.07 0.00 39.58 2.18
713 716 4.847512 TGAAAACCATGGTCCTACCTAAGA 59.152 41.667 20.07 0.00 39.58 2.10
714 717 4.838904 AAACCATGGTCCTACCTAAGAC 57.161 45.455 20.07 0.00 39.58 3.01
715 718 3.778622 ACCATGGTCCTACCTAAGACT 57.221 47.619 13.00 0.00 39.58 3.24
716 719 4.076175 ACCATGGTCCTACCTAAGACTT 57.924 45.455 13.00 0.00 39.58 3.01
717 720 3.775316 ACCATGGTCCTACCTAAGACTTG 59.225 47.826 13.00 0.00 39.58 3.16
718 721 3.134804 CCATGGTCCTACCTAAGACTTGG 59.865 52.174 2.57 0.00 39.58 3.61
719 722 2.829023 TGGTCCTACCTAAGACTTGGG 58.171 52.381 15.62 15.62 39.58 4.12
720 723 2.117051 GGTCCTACCTAAGACTTGGGG 58.883 57.143 20.56 13.47 35.25 4.96
721 724 2.117051 GTCCTACCTAAGACTTGGGGG 58.883 57.143 20.56 13.24 35.25 5.40
722 725 0.837940 CCTACCTAAGACTTGGGGGC 59.162 60.000 20.56 0.00 35.25 5.80
723 726 1.625508 CCTACCTAAGACTTGGGGGCT 60.626 57.143 20.56 3.76 35.25 5.19
724 727 2.359994 CCTACCTAAGACTTGGGGGCTA 60.360 54.545 20.56 4.69 35.25 3.93
725 728 1.581223 ACCTAAGACTTGGGGGCTAC 58.419 55.000 20.56 0.00 35.25 3.58
726 729 1.203389 ACCTAAGACTTGGGGGCTACA 60.203 52.381 20.56 0.00 35.25 2.74
727 730 2.127708 CCTAAGACTTGGGGGCTACAT 58.872 52.381 9.71 0.00 29.69 2.29
728 731 3.311103 ACCTAAGACTTGGGGGCTACATA 60.311 47.826 20.56 0.00 35.25 2.29
729 732 3.910627 CCTAAGACTTGGGGGCTACATAT 59.089 47.826 9.71 0.00 29.69 1.78
730 733 3.864789 AAGACTTGGGGGCTACATATG 57.135 47.619 0.00 0.00 29.69 1.78
731 734 2.057922 AGACTTGGGGGCTACATATGG 58.942 52.381 7.80 0.00 0.00 2.74
732 735 1.073923 GACTTGGGGGCTACATATGGG 59.926 57.143 7.80 0.65 0.00 4.00
733 736 0.251341 CTTGGGGGCTACATATGGGC 60.251 60.000 7.80 10.63 0.00 5.36
734 737 2.063015 TTGGGGGCTACATATGGGCG 62.063 60.000 7.80 0.00 31.86 6.13
735 738 2.221299 GGGGGCTACATATGGGCGA 61.221 63.158 7.80 0.00 31.86 5.54
736 739 1.296715 GGGGCTACATATGGGCGAG 59.703 63.158 7.80 0.11 31.86 5.03
737 740 1.481056 GGGGCTACATATGGGCGAGT 61.481 60.000 7.80 0.00 31.86 4.18
738 741 0.320771 GGGCTACATATGGGCGAGTG 60.321 60.000 7.80 0.00 31.86 3.51
739 742 0.679505 GGCTACATATGGGCGAGTGA 59.320 55.000 7.80 0.00 0.00 3.41
740 743 1.337260 GGCTACATATGGGCGAGTGAG 60.337 57.143 7.80 0.00 0.00 3.51
741 744 1.613925 GCTACATATGGGCGAGTGAGA 59.386 52.381 7.80 0.00 0.00 3.27
742 745 2.232452 GCTACATATGGGCGAGTGAGAT 59.768 50.000 7.80 0.00 0.00 2.75
743 746 3.306364 GCTACATATGGGCGAGTGAGATT 60.306 47.826 7.80 0.00 0.00 2.40
744 747 3.845781 ACATATGGGCGAGTGAGATTT 57.154 42.857 7.80 0.00 0.00 2.17
745 748 4.156455 ACATATGGGCGAGTGAGATTTT 57.844 40.909 7.80 0.00 0.00 1.82
746 749 4.526970 ACATATGGGCGAGTGAGATTTTT 58.473 39.130 7.80 0.00 0.00 1.94
772 775 4.341502 GTTGCAACGCACGGGCAT 62.342 61.111 14.90 0.00 38.71 4.40
773 776 4.036804 TTGCAACGCACGGGCATC 62.037 61.111 11.77 0.00 38.71 3.91
775 778 4.465512 GCAACGCACGGGCATCTG 62.466 66.667 11.77 4.07 41.24 2.90
824 829 3.626028 AAAGCACGGATTGACTTTGTC 57.374 42.857 0.00 0.00 33.18 3.18
834 839 0.542333 TGACTTTGTCGGGTTCACCA 59.458 50.000 0.00 0.00 40.22 4.17
850 855 4.729227 TCACCATCACAATACGCTTCTA 57.271 40.909 0.00 0.00 0.00 2.10
886 891 6.918123 ACGCTTTCACTTTGAATTTAAAACG 58.082 32.000 0.00 0.00 36.11 3.60
949 954 3.111098 ACGTCAATTCGTATAAGTCGCC 58.889 45.455 0.00 0.00 42.35 5.54
1032 1037 2.224281 GGGCCTGGTCAAAAGGAAAAAG 60.224 50.000 0.84 0.00 36.91 2.27
1034 1040 3.133901 GGCCTGGTCAAAAGGAAAAAGAA 59.866 43.478 0.00 0.00 36.91 2.52
1571 1605 2.109126 GCTCCAGGCCATCGACAAC 61.109 63.158 5.01 0.00 34.27 3.32
1643 4151 6.015504 GCTCATACGTACACATGAAAAACTG 58.984 40.000 0.00 0.00 31.04 3.16
1646 4154 7.738345 TCATACGTACACATGAAAAACTGATG 58.262 34.615 0.00 0.00 0.00 3.07
1666 4174 0.799534 CGTACAAACCTAGCCGACCG 60.800 60.000 0.00 0.00 0.00 4.79
1778 4286 6.035327 CAGGTATGTATATGCACATGATCGTG 59.965 42.308 13.53 13.53 39.46 4.35
1881 4389 5.991328 TGAGATGGAACGATATTGCTTTC 57.009 39.130 0.00 0.00 0.00 2.62
1882 4390 5.674525 TGAGATGGAACGATATTGCTTTCT 58.325 37.500 0.00 0.00 0.00 2.52
1927 4435 2.288642 GATGCCCAGCCTCCCATCAA 62.289 60.000 0.00 0.00 35.38 2.57
1932 4440 0.032813 CCAGCCTCCCATCAAACCAT 60.033 55.000 0.00 0.00 0.00 3.55
1936 4444 2.023695 AGCCTCCCATCAAACCATTCAT 60.024 45.455 0.00 0.00 0.00 2.57
1968 4476 7.339732 ACGATTAATCTAATCTGATGCGTTC 57.660 36.000 13.45 0.00 41.80 3.95
1981 4489 2.046700 CGTTCGCTGCCCCCTTTA 60.047 61.111 0.00 0.00 0.00 1.85
1982 4490 1.673009 CGTTCGCTGCCCCCTTTAA 60.673 57.895 0.00 0.00 0.00 1.52
1983 4491 1.238625 CGTTCGCTGCCCCCTTTAAA 61.239 55.000 0.00 0.00 0.00 1.52
1995 4503 2.235891 CCCTTTAAAACGAGCTTGGGT 58.764 47.619 5.79 0.00 0.00 4.51
2016 4524 6.183360 TGGGTAGTTATTTCTCGTACGTACAG 60.183 42.308 24.50 19.12 0.00 2.74
2028 4540 3.547613 CGTACGTACAGAATCCAGCCTAC 60.548 52.174 24.50 0.00 0.00 3.18
2034 4546 6.183360 ACGTACAGAATCCAGCCTACATAAAT 60.183 38.462 0.00 0.00 0.00 1.40
2041 4553 3.876914 TCCAGCCTACATAAATTGCTTCG 59.123 43.478 0.00 0.00 0.00 3.79
2129 4641 6.615839 GCGATATGCAACCTTCGATTTAGTAC 60.616 42.308 13.04 0.00 45.45 2.73
2130 4642 6.128902 CGATATGCAACCTTCGATTTAGTACC 60.129 42.308 0.00 0.00 33.59 3.34
2135 4647 3.805207 ACCTTCGATTTAGTACCATGCC 58.195 45.455 0.00 0.00 0.00 4.40
2162 4674 5.763876 ACAGATTTTAGGTAGGTTGCTCT 57.236 39.130 0.00 0.00 0.00 4.09
2163 4675 6.869206 ACAGATTTTAGGTAGGTTGCTCTA 57.131 37.500 0.00 0.00 0.00 2.43
2165 4679 6.668283 ACAGATTTTAGGTAGGTTGCTCTAGA 59.332 38.462 0.00 0.00 0.00 2.43
2193 4707 6.508880 GCGAAACTTTTAACCAACACCAAATC 60.509 38.462 0.00 0.00 0.00 2.17
2233 4749 6.426937 GTGCTTCTACCTCTGTTTGTAATTCA 59.573 38.462 0.00 0.00 0.00 2.57
2254 4770 5.777802 TCATTTATGTTTGCGTTGATTGGT 58.222 33.333 0.00 0.00 0.00 3.67
2276 4792 5.449862 GGTGAATTTGCTTATGCGGTGAATA 60.450 40.000 0.00 0.00 43.34 1.75
2280 4796 6.639632 ATTTGCTTATGCGGTGAATATCTT 57.360 33.333 0.00 0.00 43.34 2.40
2358 4876 2.606725 CACAATCTTGCTCTCATCGACC 59.393 50.000 0.00 0.00 0.00 4.79
2367 7511 5.126396 TGCTCTCATCGACCATAGTAATG 57.874 43.478 0.00 0.00 0.00 1.90
2396 7540 3.374988 TGCTTCAAATATGCTTCCGTCAG 59.625 43.478 0.00 0.00 0.00 3.51
2447 7591 1.063174 GCATCACGATCTTGCTTCCAC 59.937 52.381 0.00 0.00 33.61 4.02
2448 7592 2.625737 CATCACGATCTTGCTTCCACT 58.374 47.619 0.00 0.00 0.00 4.00
2477 7624 3.753797 AGAATTGCTTCGAACCTTCTTCC 59.246 43.478 0.00 0.00 36.45 3.46
2478 7625 2.631160 TTGCTTCGAACCTTCTTCCA 57.369 45.000 0.00 0.00 0.00 3.53
2486 7633 7.090808 GCTTCGAACCTTCTTCCATTAAAAAT 58.909 34.615 0.00 0.00 0.00 1.82
2513 7660 8.871686 AAAAATAATCCATATGTTTCGGAAGC 57.128 30.769 1.24 0.00 26.97 3.86
2522 7669 3.239587 TGTTTCGGAAGCATCACGATA 57.760 42.857 2.96 0.00 36.43 2.92
2546 7693 2.254459 CTTCCATCGACAAGACGACTG 58.746 52.381 0.00 0.00 44.84 3.51
2547 7694 1.244816 TCCATCGACAAGACGACTGT 58.755 50.000 0.00 0.00 44.84 3.55
2551 7698 2.855660 TCGACAAGACGACTGTTTCA 57.144 45.000 0.00 0.00 37.37 2.69
2554 7701 4.116961 TCGACAAGACGACTGTTTCAAAT 58.883 39.130 0.00 0.00 37.37 2.32
2601 7834 3.663995 TCCACATGTTTTGGAAGCATG 57.336 42.857 13.59 13.59 40.35 4.06
2733 9108 6.990349 AGACGATTGTTTCAAACCTTCTTCTA 59.010 34.615 0.00 0.00 0.00 2.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
67 68 3.370209 GGGGTTCAAGCCGACTAATAAGT 60.370 47.826 0.00 0.00 36.39 2.24
131 134 1.694696 AGAGGAGGATTTATGGGCGTC 59.305 52.381 0.00 0.00 0.00 5.19
178 181 3.781965 GGGAGGTTAGGGTATAACAACCA 59.218 47.826 11.50 0.00 42.39 3.67
258 261 3.227792 GATCATCCTCCCCCGCGAC 62.228 68.421 8.23 0.00 0.00 5.19
263 266 1.226311 ACTTTGGATCATCCTCCCCC 58.774 55.000 4.96 0.00 37.46 5.40
264 267 2.423517 GGAACTTTGGATCATCCTCCCC 60.424 54.545 4.96 0.00 37.46 4.81
265 268 2.511637 AGGAACTTTGGATCATCCTCCC 59.488 50.000 4.96 0.00 35.65 4.30
266 269 3.054065 ACAGGAACTTTGGATCATCCTCC 60.054 47.826 4.96 2.85 38.44 4.30
267 270 3.944015 CACAGGAACTTTGGATCATCCTC 59.056 47.826 4.96 0.00 38.44 3.71
268 271 3.960571 CACAGGAACTTTGGATCATCCT 58.039 45.455 4.96 0.00 41.12 3.24
277 280 1.609208 CCTCCACCACAGGAACTTTG 58.391 55.000 0.00 0.00 34.60 2.77
278 281 0.478507 CCCTCCACCACAGGAACTTT 59.521 55.000 0.00 0.00 34.60 2.66
279 282 0.697854 ACCCTCCACCACAGGAACTT 60.698 55.000 0.00 0.00 34.60 2.66
280 283 1.073706 ACCCTCCACCACAGGAACT 60.074 57.895 0.00 0.00 43.88 3.01
281 284 1.073199 CACCCTCCACCACAGGAAC 59.927 63.158 0.00 0.00 37.20 3.62
282 285 2.153401 CCACCCTCCACCACAGGAA 61.153 63.158 0.00 0.00 37.20 3.36
283 286 2.529136 CCACCCTCCACCACAGGA 60.529 66.667 0.00 0.00 36.00 3.86
284 287 1.500783 ATTCCACCCTCCACCACAGG 61.501 60.000 0.00 0.00 0.00 4.00
285 288 0.405585 AATTCCACCCTCCACCACAG 59.594 55.000 0.00 0.00 0.00 3.66
286 289 0.112218 CAATTCCACCCTCCACCACA 59.888 55.000 0.00 0.00 0.00 4.17
287 290 1.250840 GCAATTCCACCCTCCACCAC 61.251 60.000 0.00 0.00 0.00 4.16
288 291 1.076549 GCAATTCCACCCTCCACCA 59.923 57.895 0.00 0.00 0.00 4.17
289 292 0.681243 GAGCAATTCCACCCTCCACC 60.681 60.000 0.00 0.00 0.00 4.61
290 293 0.329596 AGAGCAATTCCACCCTCCAC 59.670 55.000 0.00 0.00 0.00 4.02
291 294 1.839994 CTAGAGCAATTCCACCCTCCA 59.160 52.381 0.00 0.00 0.00 3.86
292 295 1.475930 GCTAGAGCAATTCCACCCTCC 60.476 57.143 0.00 0.00 41.59 4.30
293 296 1.808133 CGCTAGAGCAATTCCACCCTC 60.808 57.143 1.89 0.00 42.21 4.30
294 297 0.179000 CGCTAGAGCAATTCCACCCT 59.821 55.000 1.89 0.00 42.21 4.34
295 298 0.815615 CCGCTAGAGCAATTCCACCC 60.816 60.000 1.89 0.00 42.21 4.61
296 299 0.815615 CCCGCTAGAGCAATTCCACC 60.816 60.000 1.89 0.00 42.21 4.61
297 300 0.178068 TCCCGCTAGAGCAATTCCAC 59.822 55.000 1.89 0.00 42.21 4.02
298 301 0.465705 CTCCCGCTAGAGCAATTCCA 59.534 55.000 1.89 0.00 42.21 3.53
299 302 0.753262 TCTCCCGCTAGAGCAATTCC 59.247 55.000 1.89 0.00 42.21 3.01
300 303 2.478831 CTTCTCCCGCTAGAGCAATTC 58.521 52.381 1.89 0.00 42.21 2.17
301 304 1.139853 CCTTCTCCCGCTAGAGCAATT 59.860 52.381 1.89 0.00 42.21 2.32
302 305 0.755686 CCTTCTCCCGCTAGAGCAAT 59.244 55.000 1.89 0.00 42.21 3.56
303 306 1.330655 CCCTTCTCCCGCTAGAGCAA 61.331 60.000 1.89 0.00 42.21 3.91
304 307 1.758514 CCCTTCTCCCGCTAGAGCA 60.759 63.158 1.89 0.00 42.21 4.26
305 308 3.133946 CCCTTCTCCCGCTAGAGC 58.866 66.667 0.00 0.00 33.66 4.09
306 309 1.743321 CTGCCCTTCTCCCGCTAGAG 61.743 65.000 0.00 0.00 35.04 2.43
307 310 1.758514 CTGCCCTTCTCCCGCTAGA 60.759 63.158 0.00 0.00 0.00 2.43
308 311 1.118356 ATCTGCCCTTCTCCCGCTAG 61.118 60.000 0.00 0.00 0.00 3.42
309 312 1.075226 ATCTGCCCTTCTCCCGCTA 60.075 57.895 0.00 0.00 0.00 4.26
310 313 2.366167 ATCTGCCCTTCTCCCGCT 60.366 61.111 0.00 0.00 0.00 5.52
311 314 2.203126 CATCTGCCCTTCTCCCGC 60.203 66.667 0.00 0.00 0.00 6.13
312 315 1.153289 CACATCTGCCCTTCTCCCG 60.153 63.158 0.00 0.00 0.00 5.14
313 316 0.107459 GACACATCTGCCCTTCTCCC 60.107 60.000 0.00 0.00 0.00 4.30
314 317 0.908198 AGACACATCTGCCCTTCTCC 59.092 55.000 0.00 0.00 32.29 3.71
315 318 2.354259 CAAGACACATCTGCCCTTCTC 58.646 52.381 0.00 0.00 34.48 2.87
316 319 1.612726 GCAAGACACATCTGCCCTTCT 60.613 52.381 0.00 0.00 34.48 2.85
317 320 0.807496 GCAAGACACATCTGCCCTTC 59.193 55.000 0.00 0.00 34.48 3.46
318 321 0.111061 TGCAAGACACATCTGCCCTT 59.889 50.000 0.00 0.00 34.48 3.95
319 322 0.330604 ATGCAAGACACATCTGCCCT 59.669 50.000 0.00 0.00 34.48 5.19
320 323 1.180029 AATGCAAGACACATCTGCCC 58.820 50.000 0.00 0.00 34.48 5.36
321 324 3.012518 AGTAATGCAAGACACATCTGCC 58.987 45.455 0.00 0.00 34.48 4.85
322 325 3.730061 GCAGTAATGCAAGACACATCTGC 60.730 47.826 10.86 0.00 39.39 4.26
323 326 3.688185 AGCAGTAATGCAAGACACATCTG 59.312 43.478 18.53 0.00 34.48 2.90
324 327 3.688185 CAGCAGTAATGCAAGACACATCT 59.312 43.478 18.53 0.00 36.42 2.90
325 328 3.181503 CCAGCAGTAATGCAAGACACATC 60.182 47.826 18.53 0.00 37.25 3.06
326 329 2.751259 CCAGCAGTAATGCAAGACACAT 59.249 45.455 18.53 0.00 37.25 3.21
327 330 2.153645 CCAGCAGTAATGCAAGACACA 58.846 47.619 18.53 0.00 37.25 3.72
328 331 1.470098 CCCAGCAGTAATGCAAGACAC 59.530 52.381 18.53 0.00 37.25 3.67
329 332 1.350684 TCCCAGCAGTAATGCAAGACA 59.649 47.619 18.53 0.00 37.25 3.41
330 333 1.740025 GTCCCAGCAGTAATGCAAGAC 59.260 52.381 18.53 15.71 37.25 3.01
331 334 1.675714 CGTCCCAGCAGTAATGCAAGA 60.676 52.381 18.53 7.77 37.25 3.02
332 335 0.729116 CGTCCCAGCAGTAATGCAAG 59.271 55.000 18.53 9.21 37.25 4.01
333 336 0.036164 ACGTCCCAGCAGTAATGCAA 59.964 50.000 18.53 0.00 37.25 4.08
334 337 0.391130 GACGTCCCAGCAGTAATGCA 60.391 55.000 18.53 0.00 37.25 3.96
335 338 1.421410 CGACGTCCCAGCAGTAATGC 61.421 60.000 10.58 7.15 0.00 3.56
336 339 1.421410 GCGACGTCCCAGCAGTAATG 61.421 60.000 10.58 0.00 0.00 1.90
337 340 1.153628 GCGACGTCCCAGCAGTAAT 60.154 57.895 10.58 0.00 0.00 1.89
338 341 2.260434 GCGACGTCCCAGCAGTAA 59.740 61.111 10.58 0.00 0.00 2.24
339 342 4.111016 CGCGACGTCCCAGCAGTA 62.111 66.667 10.58 0.00 0.00 2.74
354 357 3.188786 GATGTGAGACACGCCCGC 61.189 66.667 0.00 0.00 37.14 6.13
355 358 2.880879 CGATGTGAGACACGCCCG 60.881 66.667 0.00 0.00 37.14 6.13
356 359 3.188786 GCGATGTGAGACACGCCC 61.189 66.667 0.00 0.00 40.25 6.13
357 360 2.432456 TGCGATGTGAGACACGCC 60.432 61.111 15.81 1.90 43.04 5.68
358 361 3.075998 CTGCGATGTGAGACACGC 58.924 61.111 0.00 0.00 43.54 5.34
359 362 2.447887 GGCTGCGATGTGAGACACG 61.448 63.158 0.00 0.00 37.14 4.49
360 363 0.742281 ATGGCTGCGATGTGAGACAC 60.742 55.000 0.00 0.00 27.08 3.67
361 364 0.741927 CATGGCTGCGATGTGAGACA 60.742 55.000 15.43 0.00 0.00 3.41
362 365 1.434622 CCATGGCTGCGATGTGAGAC 61.435 60.000 20.71 0.00 0.00 3.36
363 366 1.153309 CCATGGCTGCGATGTGAGA 60.153 57.895 20.71 0.00 0.00 3.27
364 367 1.450848 ACCATGGCTGCGATGTGAG 60.451 57.895 20.71 10.05 0.00 3.51
365 368 1.746239 CACCATGGCTGCGATGTGA 60.746 57.895 20.71 0.00 0.00 3.58
366 369 2.767445 CCACCATGGCTGCGATGTG 61.767 63.158 20.71 17.48 0.00 3.21
367 370 2.438975 CCACCATGGCTGCGATGT 60.439 61.111 20.71 8.45 0.00 3.06
368 371 3.214123 CCCACCATGGCTGCGATG 61.214 66.667 13.04 16.53 35.79 3.84
369 372 4.511246 CCCCACCATGGCTGCGAT 62.511 66.667 13.04 0.00 35.79 4.58
372 375 3.384532 CAACCCCACCATGGCTGC 61.385 66.667 13.04 0.00 35.79 5.25
373 376 1.120795 AAACAACCCCACCATGGCTG 61.121 55.000 13.04 9.45 35.79 4.85
374 377 0.485099 TAAACAACCCCACCATGGCT 59.515 50.000 13.04 0.00 35.79 4.75
375 378 0.606096 GTAAACAACCCCACCATGGC 59.394 55.000 13.04 0.00 35.79 4.40
376 379 1.616374 GTGTAAACAACCCCACCATGG 59.384 52.381 11.19 11.19 37.25 3.66
377 380 2.035321 GTGTGTAAACAACCCCACCATG 59.965 50.000 0.00 0.00 0.00 3.66
378 381 2.312390 GTGTGTAAACAACCCCACCAT 58.688 47.619 0.00 0.00 0.00 3.55
379 382 1.005569 TGTGTGTAAACAACCCCACCA 59.994 47.619 0.00 0.00 31.32 4.17
380 383 1.765230 TGTGTGTAAACAACCCCACC 58.235 50.000 0.00 0.00 31.32 4.61
381 384 4.116238 CAATTGTGTGTAAACAACCCCAC 58.884 43.478 0.00 0.00 42.56 4.61
382 385 3.133003 CCAATTGTGTGTAAACAACCCCA 59.867 43.478 4.43 0.00 42.56 4.96
383 386 3.723260 CCAATTGTGTGTAAACAACCCC 58.277 45.455 4.43 0.00 42.56 4.95
384 387 3.127589 GCCAATTGTGTGTAAACAACCC 58.872 45.455 4.43 0.00 42.56 4.11
385 388 3.786635 TGCCAATTGTGTGTAAACAACC 58.213 40.909 4.43 0.00 42.56 3.77
386 389 4.429108 ACTGCCAATTGTGTGTAAACAAC 58.571 39.130 4.43 0.00 42.56 3.32
387 390 4.440802 GGACTGCCAATTGTGTGTAAACAA 60.441 41.667 4.43 0.00 43.82 2.83
388 391 3.067461 GGACTGCCAATTGTGTGTAAACA 59.933 43.478 4.43 0.00 0.00 2.83
389 392 3.317993 AGGACTGCCAATTGTGTGTAAAC 59.682 43.478 4.43 0.00 36.29 2.01
390 393 3.317711 CAGGACTGCCAATTGTGTGTAAA 59.682 43.478 4.43 0.00 36.29 2.01
391 394 2.884012 CAGGACTGCCAATTGTGTGTAA 59.116 45.455 4.43 0.00 36.29 2.41
392 395 2.503331 CAGGACTGCCAATTGTGTGTA 58.497 47.619 4.43 0.00 36.29 2.90
393 396 1.321474 CAGGACTGCCAATTGTGTGT 58.679 50.000 4.43 0.00 36.29 3.72
405 408 0.890683 GAAAACCATGGGCAGGACTG 59.109 55.000 18.09 0.00 0.00 3.51
406 409 0.482446 TGAAAACCATGGGCAGGACT 59.518 50.000 18.09 0.00 0.00 3.85
407 410 0.603065 GTGAAAACCATGGGCAGGAC 59.397 55.000 18.09 3.16 0.00 3.85
408 411 0.482446 AGTGAAAACCATGGGCAGGA 59.518 50.000 18.09 0.00 0.00 3.86
409 412 1.341080 AAGTGAAAACCATGGGCAGG 58.659 50.000 18.09 0.00 0.00 4.85
410 413 2.364970 TGAAAGTGAAAACCATGGGCAG 59.635 45.455 18.09 0.00 0.00 4.85
411 414 2.364970 CTGAAAGTGAAAACCATGGGCA 59.635 45.455 18.09 5.73 0.00 5.36
412 415 3.030668 CTGAAAGTGAAAACCATGGGC 57.969 47.619 18.09 2.89 0.00 5.36
425 428 5.765182 ATTTCACCGAAATCTCACTGAAAGT 59.235 36.000 0.00 0.00 42.81 2.66
426 429 5.673337 TTTCACCGAAATCTCACTGAAAG 57.327 39.130 0.00 0.00 42.29 2.62
427 430 6.262049 TGAATTTCACCGAAATCTCACTGAAA 59.738 34.615 2.62 0.00 40.77 2.69
428 431 5.762711 TGAATTTCACCGAAATCTCACTGAA 59.237 36.000 2.62 0.00 40.77 3.02
429 432 5.179368 GTGAATTTCACCGAAATCTCACTGA 59.821 40.000 17.07 0.00 40.77 3.41
430 433 5.385617 GTGAATTTCACCGAAATCTCACTG 58.614 41.667 17.07 0.00 40.77 3.66
431 434 5.613358 GTGAATTTCACCGAAATCTCACT 57.387 39.130 17.07 4.84 40.77 3.41
454 457 7.229306 AGTGTCTGCTGAAATTACTGAAATTCA 59.771 33.333 0.00 0.00 36.76 2.57
455 458 7.536622 CAGTGTCTGCTGAAATTACTGAAATTC 59.463 37.037 16.51 0.00 36.76 2.17
456 459 7.229306 TCAGTGTCTGCTGAAATTACTGAAATT 59.771 33.333 19.37 0.00 41.93 1.82
457 460 6.712095 TCAGTGTCTGCTGAAATTACTGAAAT 59.288 34.615 19.37 0.00 41.93 2.17
458 461 6.054941 TCAGTGTCTGCTGAAATTACTGAAA 58.945 36.000 19.37 7.04 41.93 2.69
459 462 5.610398 TCAGTGTCTGCTGAAATTACTGAA 58.390 37.500 19.37 10.01 41.93 3.02
460 463 5.213891 TCAGTGTCTGCTGAAATTACTGA 57.786 39.130 18.49 18.49 41.93 3.41
469 472 5.720202 ACGTAATATTTCAGTGTCTGCTGA 58.280 37.500 0.00 0.00 43.03 4.26
470 473 6.408858 AACGTAATATTTCAGTGTCTGCTG 57.591 37.500 0.00 0.00 37.81 4.41
471 474 6.183360 CGAAACGTAATATTTCAGTGTCTGCT 60.183 38.462 0.00 0.00 36.09 4.24
472 475 5.952064 CGAAACGTAATATTTCAGTGTCTGC 59.048 40.000 0.00 0.00 36.09 4.26
473 476 6.466812 CCGAAACGTAATATTTCAGTGTCTG 58.533 40.000 0.00 0.00 36.09 3.51
474 477 5.063060 GCCGAAACGTAATATTTCAGTGTCT 59.937 40.000 0.00 0.00 36.09 3.41
475 478 5.253335 GCCGAAACGTAATATTTCAGTGTC 58.747 41.667 0.00 0.00 36.09 3.67
476 479 4.093850 GGCCGAAACGTAATATTTCAGTGT 59.906 41.667 0.00 0.00 36.09 3.55
477 480 4.093703 TGGCCGAAACGTAATATTTCAGTG 59.906 41.667 0.00 0.00 36.09 3.66
478 481 4.255301 TGGCCGAAACGTAATATTTCAGT 58.745 39.130 0.00 0.00 36.09 3.41
479 482 4.868450 TGGCCGAAACGTAATATTTCAG 57.132 40.909 0.00 0.00 36.09 3.02
480 483 5.624344 TTTGGCCGAAACGTAATATTTCA 57.376 34.783 1.75 0.00 36.09 2.69
481 484 8.791355 ATATTTTGGCCGAAACGTAATATTTC 57.209 30.769 20.75 0.00 33.52 2.17
482 485 9.589111 AAATATTTTGGCCGAAACGTAATATTT 57.411 25.926 20.75 19.98 34.43 1.40
483 486 9.589111 AAAATATTTTGGCCGAAACGTAATATT 57.411 25.926 20.75 15.83 31.57 1.28
485 488 9.719279 CTAAAATATTTTGGCCGAAACGTAATA 57.281 29.630 20.75 9.08 0.00 0.98
486 489 7.221259 GCTAAAATATTTTGGCCGAAACGTAAT 59.779 33.333 29.15 7.01 45.35 1.89
487 490 6.527372 GCTAAAATATTTTGGCCGAAACGTAA 59.473 34.615 29.15 7.15 45.35 3.18
488 491 6.028987 GCTAAAATATTTTGGCCGAAACGTA 58.971 36.000 29.15 10.53 45.35 3.57
489 492 4.860352 GCTAAAATATTTTGGCCGAAACGT 59.140 37.500 29.15 8.51 45.35 3.99
490 493 5.369947 GCTAAAATATTTTGGCCGAAACG 57.630 39.130 29.15 4.77 45.35 3.60
506 509 9.920133 TGTTGTGCTATATTGAAATTGCTAAAA 57.080 25.926 0.00 0.00 0.00 1.52
507 510 9.920133 TTGTTGTGCTATATTGAAATTGCTAAA 57.080 25.926 0.00 0.00 0.00 1.85
510 513 9.090692 GAATTGTTGTGCTATATTGAAATTGCT 57.909 29.630 0.00 0.00 0.00 3.91
511 514 8.330302 GGAATTGTTGTGCTATATTGAAATTGC 58.670 33.333 0.00 0.00 0.00 3.56
512 515 9.368674 TGGAATTGTTGTGCTATATTGAAATTG 57.631 29.630 0.00 0.00 0.00 2.32
513 516 9.941325 TTGGAATTGTTGTGCTATATTGAAATT 57.059 25.926 0.00 0.00 0.00 1.82
522 525 9.941325 TGAAAAATATTGGAATTGTTGTGCTAT 57.059 25.926 0.00 0.00 0.00 2.97
523 526 9.770097 TTGAAAAATATTGGAATTGTTGTGCTA 57.230 25.926 0.00 0.00 0.00 3.49
524 527 8.674263 TTGAAAAATATTGGAATTGTTGTGCT 57.326 26.923 0.00 0.00 0.00 4.40
525 528 9.896263 AATTGAAAAATATTGGAATTGTTGTGC 57.104 25.926 0.00 0.00 0.00 4.57
576 579 9.573133 GACCGAAATATTCACTTGAATTCAATT 57.427 29.630 20.76 13.01 41.64 2.32
577 580 8.739039 TGACCGAAATATTCACTTGAATTCAAT 58.261 29.630 20.76 8.72 41.64 2.57
578 581 8.105097 TGACCGAAATATTCACTTGAATTCAA 57.895 30.769 19.45 19.45 41.64 2.69
579 582 7.680442 TGACCGAAATATTCACTTGAATTCA 57.320 32.000 9.68 3.38 41.64 2.57
580 583 9.573133 AAATGACCGAAATATTCACTTGAATTC 57.427 29.630 9.68 0.00 41.64 2.17
581 584 9.357652 CAAATGACCGAAATATTCACTTGAATT 57.642 29.630 9.68 0.00 41.64 2.17
582 585 7.975616 CCAAATGACCGAAATATTCACTTGAAT 59.024 33.333 9.37 9.37 45.77 2.57
583 586 7.312154 CCAAATGACCGAAATATTCACTTGAA 58.688 34.615 0.00 0.00 38.56 2.69
584 587 6.624861 GCCAAATGACCGAAATATTCACTTGA 60.625 38.462 0.00 0.00 29.95 3.02
585 588 5.516339 GCCAAATGACCGAAATATTCACTTG 59.484 40.000 0.00 0.00 0.00 3.16
586 589 5.418840 AGCCAAATGACCGAAATATTCACTT 59.581 36.000 0.00 0.00 0.00 3.16
587 590 4.949856 AGCCAAATGACCGAAATATTCACT 59.050 37.500 0.00 0.00 0.00 3.41
588 591 5.036737 CAGCCAAATGACCGAAATATTCAC 58.963 41.667 0.00 0.00 0.00 3.18
589 592 4.946772 TCAGCCAAATGACCGAAATATTCA 59.053 37.500 0.00 0.00 0.00 2.57
590 593 5.499139 TCAGCCAAATGACCGAAATATTC 57.501 39.130 0.00 0.00 0.00 1.75
591 594 5.913137 TTCAGCCAAATGACCGAAATATT 57.087 34.783 0.00 0.00 0.00 1.28
592 595 5.913137 TTTCAGCCAAATGACCGAAATAT 57.087 34.783 0.00 0.00 0.00 1.28
593 596 5.913137 ATTTCAGCCAAATGACCGAAATA 57.087 34.783 0.00 0.00 33.07 1.40
594 597 4.806640 ATTTCAGCCAAATGACCGAAAT 57.193 36.364 0.00 0.00 33.07 2.17
603 606 5.549742 TTCAGTTTCCATTTCAGCCAAAT 57.450 34.783 0.00 0.00 34.79 2.32
604 607 5.350504 TTTCAGTTTCCATTTCAGCCAAA 57.649 34.783 0.00 0.00 0.00 3.28
605 608 5.070180 TGATTTCAGTTTCCATTTCAGCCAA 59.930 36.000 0.00 0.00 0.00 4.52
606 609 4.588106 TGATTTCAGTTTCCATTTCAGCCA 59.412 37.500 0.00 0.00 0.00 4.75
607 610 4.925646 GTGATTTCAGTTTCCATTTCAGCC 59.074 41.667 0.00 0.00 0.00 4.85
608 611 5.632347 CAGTGATTTCAGTTTCCATTTCAGC 59.368 40.000 0.00 0.00 0.00 4.26
609 612 6.973843 TCAGTGATTTCAGTTTCCATTTCAG 58.026 36.000 0.00 0.00 0.00 3.02
610 613 6.957920 TCAGTGATTTCAGTTTCCATTTCA 57.042 33.333 0.00 0.00 0.00 2.69
611 614 8.822652 ATTTCAGTGATTTCAGTTTCCATTTC 57.177 30.769 0.00 0.00 0.00 2.17
612 615 9.696917 GTATTTCAGTGATTTCAGTTTCCATTT 57.303 29.630 0.00 0.00 0.00 2.32
613 616 8.859090 TGTATTTCAGTGATTTCAGTTTCCATT 58.141 29.630 0.00 0.00 0.00 3.16
614 617 8.299570 GTGTATTTCAGTGATTTCAGTTTCCAT 58.700 33.333 0.00 0.00 0.00 3.41
615 618 7.502226 AGTGTATTTCAGTGATTTCAGTTTCCA 59.498 33.333 0.00 0.00 0.00 3.53
616 619 7.875971 AGTGTATTTCAGTGATTTCAGTTTCC 58.124 34.615 0.00 0.00 0.00 3.13
641 644 4.582656 ACCAACCGAAATCACTGAAATTCA 59.417 37.500 0.00 0.00 0.00 2.57
642 645 4.917415 CACCAACCGAAATCACTGAAATTC 59.083 41.667 0.00 0.00 0.00 2.17
643 646 4.795962 GCACCAACCGAAATCACTGAAATT 60.796 41.667 0.00 0.00 0.00 1.82
644 647 3.305335 GCACCAACCGAAATCACTGAAAT 60.305 43.478 0.00 0.00 0.00 2.17
645 648 2.034053 GCACCAACCGAAATCACTGAAA 59.966 45.455 0.00 0.00 0.00 2.69
646 649 1.606668 GCACCAACCGAAATCACTGAA 59.393 47.619 0.00 0.00 0.00 3.02
647 650 1.202758 AGCACCAACCGAAATCACTGA 60.203 47.619 0.00 0.00 0.00 3.41
648 651 1.069022 CAGCACCAACCGAAATCACTG 60.069 52.381 0.00 0.00 0.00 3.66
649 652 1.202758 TCAGCACCAACCGAAATCACT 60.203 47.619 0.00 0.00 0.00 3.41
650 653 1.234821 TCAGCACCAACCGAAATCAC 58.765 50.000 0.00 0.00 0.00 3.06
651 654 1.974265 TTCAGCACCAACCGAAATCA 58.026 45.000 0.00 0.00 0.00 2.57
652 655 3.575965 ATTTCAGCACCAACCGAAATC 57.424 42.857 0.00 0.00 33.87 2.17
653 656 4.335400 AAATTTCAGCACCAACCGAAAT 57.665 36.364 0.00 0.00 39.20 2.17
654 657 3.810310 AAATTTCAGCACCAACCGAAA 57.190 38.095 0.00 0.00 0.00 3.46
655 658 3.810310 AAAATTTCAGCACCAACCGAA 57.190 38.095 0.00 0.00 0.00 4.30
656 659 3.383185 AGAAAAATTTCAGCACCAACCGA 59.617 39.130 8.47 0.00 39.61 4.69
657 660 3.716601 AGAAAAATTTCAGCACCAACCG 58.283 40.909 8.47 0.00 39.61 4.44
658 661 4.692228 TGAGAAAAATTTCAGCACCAACC 58.308 39.130 8.47 0.00 39.61 3.77
659 662 6.313658 AGTTTGAGAAAAATTTCAGCACCAAC 59.686 34.615 8.47 7.87 39.61 3.77
660 663 6.313411 CAGTTTGAGAAAAATTTCAGCACCAA 59.687 34.615 8.47 2.51 39.61 3.67
661 664 5.811613 CAGTTTGAGAAAAATTTCAGCACCA 59.188 36.000 8.47 0.00 39.61 4.17
662 665 6.042143 TCAGTTTGAGAAAAATTTCAGCACC 58.958 36.000 8.47 1.10 39.61 5.01
663 666 7.524294 TTCAGTTTGAGAAAAATTTCAGCAC 57.476 32.000 8.47 0.55 39.61 4.40
664 667 8.721019 ATTTCAGTTTGAGAAAAATTTCAGCA 57.279 26.923 8.47 3.62 38.36 4.41
665 668 9.429600 CAATTTCAGTTTGAGAAAAATTTCAGC 57.570 29.630 8.47 1.26 38.36 4.26
672 675 9.277783 TGGTTTTCAATTTCAGTTTGAGAAAAA 57.722 25.926 0.00 0.00 38.36 1.94
673 676 8.839310 TGGTTTTCAATTTCAGTTTGAGAAAA 57.161 26.923 0.00 0.00 38.36 2.29
674 677 8.881743 CATGGTTTTCAATTTCAGTTTGAGAAA 58.118 29.630 0.00 0.00 39.11 2.52
675 678 7.495279 CCATGGTTTTCAATTTCAGTTTGAGAA 59.505 33.333 2.57 0.00 34.76 2.87
676 679 6.985645 CCATGGTTTTCAATTTCAGTTTGAGA 59.014 34.615 2.57 0.00 34.76 3.27
677 680 6.762661 ACCATGGTTTTCAATTTCAGTTTGAG 59.237 34.615 13.00 0.00 34.76 3.02
678 681 6.648192 ACCATGGTTTTCAATTTCAGTTTGA 58.352 32.000 13.00 0.00 0.00 2.69
679 682 6.018016 GGACCATGGTTTTCAATTTCAGTTTG 60.018 38.462 20.85 0.00 0.00 2.93
680 683 6.054941 GGACCATGGTTTTCAATTTCAGTTT 58.945 36.000 20.85 0.00 0.00 2.66
681 684 5.366477 AGGACCATGGTTTTCAATTTCAGTT 59.634 36.000 20.85 0.00 0.00 3.16
682 685 4.901250 AGGACCATGGTTTTCAATTTCAGT 59.099 37.500 20.85 0.00 0.00 3.41
683 686 5.473066 AGGACCATGGTTTTCAATTTCAG 57.527 39.130 20.85 0.00 0.00 3.02
684 687 5.245075 GGTAGGACCATGGTTTTCAATTTCA 59.755 40.000 20.85 0.00 38.42 2.69
685 688 5.480422 AGGTAGGACCATGGTTTTCAATTTC 59.520 40.000 20.85 2.00 41.95 2.17
686 689 5.402630 AGGTAGGACCATGGTTTTCAATTT 58.597 37.500 20.85 0.00 41.95 1.82
687 690 5.010708 AGGTAGGACCATGGTTTTCAATT 57.989 39.130 20.85 0.00 41.95 2.32
688 691 4.675063 AGGTAGGACCATGGTTTTCAAT 57.325 40.909 20.85 1.57 41.95 2.57
689 692 5.311121 TCTTAGGTAGGACCATGGTTTTCAA 59.689 40.000 20.85 6.44 41.95 2.69
690 693 4.847512 TCTTAGGTAGGACCATGGTTTTCA 59.152 41.667 20.85 1.86 41.95 2.69
691 694 5.045797 AGTCTTAGGTAGGACCATGGTTTTC 60.046 44.000 20.85 11.97 41.95 2.29
692 695 4.850386 AGTCTTAGGTAGGACCATGGTTTT 59.150 41.667 20.85 12.87 41.95 2.43
693 696 4.436079 AGTCTTAGGTAGGACCATGGTTT 58.564 43.478 20.85 13.25 41.95 3.27
694 697 4.076175 AGTCTTAGGTAGGACCATGGTT 57.924 45.455 20.85 6.57 41.95 3.67
695 698 3.775316 CAAGTCTTAGGTAGGACCATGGT 59.225 47.826 19.89 19.89 41.95 3.55
696 699 3.134804 CCAAGTCTTAGGTAGGACCATGG 59.865 52.174 11.19 11.19 41.95 3.66
697 700 3.134804 CCCAAGTCTTAGGTAGGACCATG 59.865 52.174 0.00 0.00 41.95 3.66
698 701 3.385115 CCCAAGTCTTAGGTAGGACCAT 58.615 50.000 0.00 0.00 41.95 3.55
699 702 2.561297 CCCCAAGTCTTAGGTAGGACCA 60.561 54.545 0.00 0.00 41.95 4.02
700 703 2.117051 CCCCAAGTCTTAGGTAGGACC 58.883 57.143 0.00 0.00 38.99 4.46
701 704 2.117051 CCCCCAAGTCTTAGGTAGGAC 58.883 57.143 0.00 0.00 33.03 3.85
702 705 1.624391 GCCCCCAAGTCTTAGGTAGGA 60.624 57.143 0.00 0.00 0.00 2.94
703 706 0.837940 GCCCCCAAGTCTTAGGTAGG 59.162 60.000 0.00 0.00 0.00 3.18
704 707 1.880941 AGCCCCCAAGTCTTAGGTAG 58.119 55.000 0.00 0.00 0.00 3.18
705 708 2.044769 TGTAGCCCCCAAGTCTTAGGTA 59.955 50.000 0.00 0.00 0.00 3.08
706 709 1.203389 TGTAGCCCCCAAGTCTTAGGT 60.203 52.381 0.00 0.00 0.00 3.08
707 710 1.580059 TGTAGCCCCCAAGTCTTAGG 58.420 55.000 0.00 0.00 0.00 2.69
708 711 4.263068 CCATATGTAGCCCCCAAGTCTTAG 60.263 50.000 1.24 0.00 0.00 2.18
709 712 3.650942 CCATATGTAGCCCCCAAGTCTTA 59.349 47.826 1.24 0.00 0.00 2.10
710 713 2.443255 CCATATGTAGCCCCCAAGTCTT 59.557 50.000 1.24 0.00 0.00 3.01
711 714 2.057922 CCATATGTAGCCCCCAAGTCT 58.942 52.381 1.24 0.00 0.00 3.24
712 715 1.073923 CCCATATGTAGCCCCCAAGTC 59.926 57.143 1.24 0.00 0.00 3.01
713 716 1.149101 CCCATATGTAGCCCCCAAGT 58.851 55.000 1.24 0.00 0.00 3.16
714 717 0.251341 GCCCATATGTAGCCCCCAAG 60.251 60.000 1.24 0.00 0.00 3.61
715 718 1.850549 GCCCATATGTAGCCCCCAA 59.149 57.895 1.24 0.00 0.00 4.12
716 719 2.525124 CGCCCATATGTAGCCCCCA 61.525 63.158 1.24 0.00 0.00 4.96
717 720 2.185310 CTCGCCCATATGTAGCCCCC 62.185 65.000 1.24 0.00 0.00 5.40
718 721 1.296715 CTCGCCCATATGTAGCCCC 59.703 63.158 1.24 0.00 0.00 5.80
719 722 0.320771 CACTCGCCCATATGTAGCCC 60.321 60.000 1.24 0.00 0.00 5.19
720 723 0.679505 TCACTCGCCCATATGTAGCC 59.320 55.000 1.24 0.00 0.00 3.93
721 724 1.613925 TCTCACTCGCCCATATGTAGC 59.386 52.381 1.24 3.50 0.00 3.58
722 725 4.527509 AATCTCACTCGCCCATATGTAG 57.472 45.455 1.24 0.00 0.00 2.74
723 726 4.955811 AAATCTCACTCGCCCATATGTA 57.044 40.909 1.24 0.00 0.00 2.29
724 727 3.845781 AAATCTCACTCGCCCATATGT 57.154 42.857 1.24 0.00 0.00 2.29
820 825 0.470341 TGTGATGGTGAACCCGACAA 59.530 50.000 0.00 0.00 35.15 3.18
821 826 0.470341 TTGTGATGGTGAACCCGACA 59.530 50.000 0.00 0.00 35.15 4.35
824 829 1.663643 CGTATTGTGATGGTGAACCCG 59.336 52.381 0.00 0.00 35.15 5.28
834 839 2.429610 ACGGGTAGAAGCGTATTGTGAT 59.570 45.455 0.00 0.00 0.00 3.06
886 891 3.788333 TTAGTACCACCTCGCATACAC 57.212 47.619 0.00 0.00 0.00 2.90
1166 1172 1.006102 CACGTTGAACCCGAGCTCT 60.006 57.895 12.85 0.00 0.00 4.09
1502 1536 2.768253 TCACGTCCTGCTTCATGATT 57.232 45.000 0.00 0.00 0.00 2.57
1571 1605 4.880537 CGCCGCTACTCCTGCAGG 62.881 72.222 27.87 27.87 0.00 4.85
1605 1642 1.561769 ATGAGCCGGGGATGACAACA 61.562 55.000 2.18 0.00 0.00 3.33
1643 4151 0.928229 CGGCTAGGTTTGTACGCATC 59.072 55.000 0.00 0.00 0.00 3.91
1646 4154 1.080435 GGTCGGCTAGGTTTGTACGC 61.080 60.000 0.00 0.00 0.00 4.42
1666 4174 1.353076 GATTAACCGGTGTCCACGAC 58.647 55.000 8.52 0.00 0.00 4.34
1881 4389 4.559063 ATGCCTAGCGCTGCCCAG 62.559 66.667 22.90 9.34 38.78 4.45
1882 4390 4.552365 GATGCCTAGCGCTGCCCA 62.552 66.667 22.90 14.05 38.78 5.36
1899 4407 0.179062 GGCTGGGCATCAGTAGTCAG 60.179 60.000 7.89 0.00 45.08 3.51
1900 4408 0.618680 AGGCTGGGCATCAGTAGTCA 60.619 55.000 7.89 0.00 45.08 3.41
1905 4413 3.415087 GGGAGGCTGGGCATCAGT 61.415 66.667 6.52 0.00 41.39 3.41
1927 4435 1.837439 TCGTAGGGCTCATGAATGGTT 59.163 47.619 0.00 0.00 0.00 3.67
1932 4440 5.808366 AGATTAATCGTAGGGCTCATGAA 57.192 39.130 9.78 0.00 0.00 2.57
1968 4476 1.211709 CGTTTTAAAGGGGGCAGCG 59.788 57.895 0.00 0.00 0.00 5.18
1977 4485 5.684550 AACTACCCAAGCTCGTTTTAAAG 57.315 39.130 0.00 0.00 0.00 1.85
1978 4486 7.748691 AATAACTACCCAAGCTCGTTTTAAA 57.251 32.000 0.00 0.00 0.00 1.52
1979 4487 7.662669 AGAAATAACTACCCAAGCTCGTTTTAA 59.337 33.333 0.00 0.00 0.00 1.52
1980 4488 7.163441 AGAAATAACTACCCAAGCTCGTTTTA 58.837 34.615 0.00 0.00 0.00 1.52
1981 4489 6.002082 AGAAATAACTACCCAAGCTCGTTTT 58.998 36.000 0.00 0.00 0.00 2.43
1982 4490 5.557866 AGAAATAACTACCCAAGCTCGTTT 58.442 37.500 0.00 0.00 0.00 3.60
1983 4491 5.161943 AGAAATAACTACCCAAGCTCGTT 57.838 39.130 0.00 0.00 0.00 3.85
1995 4503 8.338259 GGATTCTGTACGTACGAGAAATAACTA 58.662 37.037 28.17 14.86 31.88 2.24
2016 4524 6.396829 AAGCAATTTATGTAGGCTGGATTC 57.603 37.500 0.00 0.00 34.56 2.52
2028 4540 6.253942 TGCATGATTTGTCGAAGCAATTTATG 59.746 34.615 0.00 9.29 37.18 1.90
2034 4546 2.553602 AGTGCATGATTTGTCGAAGCAA 59.446 40.909 0.00 0.00 37.18 3.91
2041 4553 4.737054 CCCACTAAAGTGCATGATTTGTC 58.263 43.478 4.53 0.00 44.34 3.18
2119 4631 5.113383 TGTAAGTGGCATGGTACTAAATCG 58.887 41.667 0.00 0.00 0.00 3.34
2129 4641 4.949856 ACCTAAAATCTGTAAGTGGCATGG 59.050 41.667 0.00 0.00 33.76 3.66
2130 4642 6.260936 CCTACCTAAAATCTGTAAGTGGCATG 59.739 42.308 0.00 0.00 33.76 4.06
2135 4647 6.879458 AGCAACCTACCTAAAATCTGTAAGTG 59.121 38.462 0.00 0.00 33.76 3.16
2162 4674 6.968335 GTGTTGGTTAAAAGTTTCGCTTTCTA 59.032 34.615 0.00 0.00 45.91 2.10
2163 4675 5.803461 GTGTTGGTTAAAAGTTTCGCTTTCT 59.197 36.000 0.00 0.00 45.91 2.52
2233 4749 5.777802 TCACCAATCAACGCAAACATAAAT 58.222 33.333 0.00 0.00 0.00 1.40
2254 4770 4.717233 ATTCACCGCATAAGCAAATTCA 57.283 36.364 0.00 0.00 42.27 2.57
2337 4855 2.606725 GGTCGATGAGAGCAAGATTGTG 59.393 50.000 0.00 0.00 46.08 3.33
2367 7511 5.981915 GGAAGCATATTTGAAGCAATTCTCC 59.018 40.000 0.00 0.00 0.00 3.71
2420 7564 3.388308 GCAAGATCGTGATGCTACTGAT 58.612 45.455 13.18 0.00 37.12 2.90
2447 7591 4.564769 GGTTCGAAGCAATTCTCTAGTCAG 59.435 45.833 21.83 0.00 0.00 3.51
2448 7592 4.220821 AGGTTCGAAGCAATTCTCTAGTCA 59.779 41.667 27.46 0.00 0.00 3.41
2507 7654 2.584166 GCAATATCGTGATGCTTCCG 57.416 50.000 0.00 1.20 37.12 4.30
2513 7660 3.989817 TCGATGGAAGCAATATCGTGATG 59.010 43.478 0.00 0.00 42.96 3.07
2522 7669 2.002586 CGTCTTGTCGATGGAAGCAAT 58.997 47.619 0.00 0.00 0.00 3.56
2615 7849 6.200100 GTTCGAAGCAATTCTCTAGTCGATA 58.800 40.000 0.00 0.00 36.11 2.92
2665 7984 3.833650 TGATGCTTCCAAAACATGTGGAT 59.166 39.130 0.00 0.00 44.62 3.41
2714 9089 8.746052 TTCTGATAGAAGAAGGTTTGAAACAA 57.254 30.769 10.53 0.00 32.42 2.83
2753 9128 4.012374 AGATCGTGATGCTTCCAAAACAT 58.988 39.130 0.00 0.00 0.00 2.71
2754 9129 3.411446 AGATCGTGATGCTTCCAAAACA 58.589 40.909 0.00 0.00 0.00 2.83
2755 9130 4.161333 CAAGATCGTGATGCTTCCAAAAC 58.839 43.478 2.01 0.00 0.00 2.43
2758 9133 3.002791 GACAAGATCGTGATGCTTCCAA 58.997 45.455 15.90 0.00 0.00 3.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.