Multiple sequence alignment - TraesCS2A01G001900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS2A01G001900 chr2A 100.000 2591 0 0 1 2591 745983 748573 0.000000e+00 4785.0
1 TraesCS2A01G001900 chr2A 97.327 449 12 0 1 449 244289991 244289543 0.000000e+00 763.0
2 TraesCS2A01G001900 chr2A 95.000 480 16 7 1 476 776437919 776437444 0.000000e+00 747.0
3 TraesCS2A01G001900 chr2A 94.583 480 18 7 1 476 776412491 776412016 0.000000e+00 736.0
4 TraesCS2A01G001900 chr2A 80.048 832 99 38 776 1569 766336645 766337447 2.910000e-154 555.0
5 TraesCS2A01G001900 chr2A 79.968 634 94 23 952 1573 715394 716006 1.100000e-118 436.0
6 TraesCS2A01G001900 chr2A 77.927 743 103 38 888 1605 954997 955703 8.630000e-110 407.0
7 TraesCS2A01G001900 chr2A 81.437 501 70 14 1115 1605 820110 820597 3.130000e-104 388.0
8 TraesCS2A01G001900 chr2A 81.437 501 70 14 1115 1605 892124 892611 3.130000e-104 388.0
9 TraesCS2A01G001900 chr2A 93.258 89 1 2 776 859 953609 953697 2.710000e-25 126.0
10 TraesCS2A01G001900 chr2A 82.143 140 6 7 776 900 891738 891873 4.560000e-18 102.0
11 TraesCS2A01G001900 chr2A 83.951 81 6 5 929 1007 891944 892019 1.290000e-08 71.3
12 TraesCS2A01G001900 chr2D 92.760 884 51 4 721 1598 1637525 1638401 0.000000e+00 1266.0
13 TraesCS2A01G001900 chr2D 88.491 782 49 15 1602 2375 1638802 1639550 0.000000e+00 907.0
14 TraesCS2A01G001900 chr2D 95.896 463 17 2 1 462 524029571 524030032 0.000000e+00 749.0
15 TraesCS2A01G001900 chr2D 85.859 495 62 5 1115 1605 1659621 1660111 1.060000e-143 520.0
16 TraesCS2A01G001900 chr2D 84.298 242 11 8 442 679 1636931 1637149 7.260000e-51 211.0
17 TraesCS2A01G001900 chr2D 87.342 79 2 1 789 859 1659305 1659383 1.650000e-12 84.2
18 TraesCS2A01G001900 chr2D 94.444 54 3 0 807 860 5643409 5643356 1.650000e-12 84.2
19 TraesCS2A01G001900 chr2D 94.231 52 2 1 811 861 1667787 1667838 7.690000e-11 78.7
20 TraesCS2A01G001900 chr2D 85.714 63 8 1 2498 2559 474927786 474927848 5.980000e-07 65.8
21 TraesCS2A01G001900 chr2B 91.317 668 40 9 954 1605 10188206 10187541 0.000000e+00 896.0
22 TraesCS2A01G001900 chr2B 96.739 184 6 0 701 884 10188415 10188232 9.010000e-80 307.0
23 TraesCS2A01G001900 chr2B 85.246 122 14 2 2384 2501 10184724 10184603 3.500000e-24 122.0
24 TraesCS2A01G001900 chr2B 85.714 126 3 5 1602 1712 10187162 10187037 4.530000e-23 119.0
25 TraesCS2A01G001900 chr2B 96.923 65 2 0 580 644 10188504 10188440 2.730000e-20 110.0
26 TraesCS2A01G001900 chr2B 81.707 82 15 0 2510 2591 753014005 753014086 4.630000e-08 69.4
27 TraesCS2A01G001900 chr4A 98.190 442 8 0 1 442 603564399 603564840 0.000000e+00 773.0
28 TraesCS2A01G001900 chr4A 97.738 442 10 0 1 442 113305594 113305153 0.000000e+00 761.0
29 TraesCS2A01G001900 chr6A 97.743 443 10 0 1 443 257953680 257954122 0.000000e+00 763.0
30 TraesCS2A01G001900 chr6A 97.738 442 10 0 1 442 427312693 427313134 0.000000e+00 761.0
31 TraesCS2A01G001900 chr6A 89.153 378 35 5 1767 2141 558173667 558173293 1.400000e-127 466.0
32 TraesCS2A01G001900 chr6A 88.391 379 38 5 1766 2141 15569836 15570211 3.930000e-123 451.0
33 TraesCS2A01G001900 chr6A 87.565 386 40 7 1760 2141 31463982 31464363 8.510000e-120 440.0
34 TraesCS2A01G001900 chr7A 97.738 442 10 0 1 442 69940703 69940262 0.000000e+00 761.0
35 TraesCS2A01G001900 chr5A 84.317 542 67 8 1028 1569 617526059 617526582 4.940000e-142 514.0
36 TraesCS2A01G001900 chr5A 88.060 67 7 1 645 710 617520119 617520185 7.690000e-11 78.7
37 TraesCS2A01G001900 chr5A 86.567 67 8 1 645 710 617520262 617520328 3.580000e-09 73.1
38 TraesCS2A01G001900 chr1D 88.189 381 38 6 1767 2143 468174853 468175230 5.090000e-122 448.0
39 TraesCS2A01G001900 chr1D 88.127 379 34 10 1767 2141 462935994 462935623 8.510000e-120 440.0
40 TraesCS2A01G001900 chr1A 88.360 378 37 6 1767 2141 586939118 586938745 5.090000e-122 448.0
41 TraesCS2A01G001900 chr1A 89.552 67 4 2 2527 2591 363427960 363427895 5.940000e-12 82.4
42 TraesCS2A01G001900 chr1A 82.927 82 14 0 2510 2591 493297036 493297117 9.940000e-10 75.0
43 TraesCS2A01G001900 chr3D 88.220 382 32 11 1767 2141 255422232 255422607 6.580000e-121 444.0
44 TraesCS2A01G001900 chr4D 87.629 388 38 9 1760 2141 374083171 374082788 2.370000e-120 442.0
45 TraesCS2A01G001900 chrUn 87.927 381 36 10 1767 2142 34421887 34421512 8.510000e-120 440.0
46 TraesCS2A01G001900 chr7B 83.951 81 12 1 2510 2590 634761274 634761195 2.760000e-10 76.8
47 TraesCS2A01G001900 chr6B 81.481 81 13 2 2510 2590 25942163 25942085 5.980000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS2A01G001900 chr2A 745983 748573 2590 False 4785.000000 4785 100.000000 1 2591 1 chr2A.!!$F2 2590
1 TraesCS2A01G001900 chr2A 766336645 766337447 802 False 555.000000 555 80.048000 776 1569 1 chr2A.!!$F4 793
2 TraesCS2A01G001900 chr2A 715394 716006 612 False 436.000000 436 79.968000 952 1573 1 chr2A.!!$F1 621
3 TraesCS2A01G001900 chr2A 953609 955703 2094 False 266.500000 407 85.592500 776 1605 2 chr2A.!!$F6 829
4 TraesCS2A01G001900 chr2D 1636931 1639550 2619 False 794.666667 1266 88.516333 442 2375 3 chr2D.!!$F4 1933
5 TraesCS2A01G001900 chr2D 1659305 1660111 806 False 302.100000 520 86.600500 789 1605 2 chr2D.!!$F5 816
6 TraesCS2A01G001900 chr2B 10184603 10188504 3901 True 310.800000 896 91.187800 580 2501 5 chr2B.!!$R1 1921
7 TraesCS2A01G001900 chr5A 617526059 617526582 523 False 514.000000 514 84.317000 1028 1569 1 chr5A.!!$F1 541

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
70 71 0.030908 CGAGGGCGTGAGGAGATTAC 59.969 60.0 0.00 0.0 0.00 1.89 F
157 158 0.107831 CAAGGGTGTGAACTTCGGGA 59.892 55.0 0.00 0.0 0.00 5.14 F
192 193 0.179108 GCGTGCCTCGGTTATCTCTT 60.179 55.0 0.99 0.0 40.26 2.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1368 3081 0.033504 ATGTCACGCTGAGGTCGTTT 59.966 50.0 0.0 0.0 38.19 3.60 R
1466 3179 0.107165 GGCTTTCTTATCAGCGGGGT 60.107 55.0 0.0 0.0 36.85 4.95 R
1764 4294 0.388134 TCCGACGCAACTCTAACAGC 60.388 55.0 0.0 0.0 0.00 4.40 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 0.912486 CCTCAAGGGTCCCTTAGTGG 59.088 60.000 23.37 20.42 42.67 4.00
29 30 1.554822 CCTCAAGGGTCCCTTAGTGGA 60.555 57.143 23.37 14.64 42.67 4.02
30 31 2.266279 CTCAAGGGTCCCTTAGTGGAA 58.734 52.381 23.37 4.19 42.67 3.53
31 32 2.846827 CTCAAGGGTCCCTTAGTGGAAT 59.153 50.000 23.37 0.00 42.67 3.01
32 33 2.844348 TCAAGGGTCCCTTAGTGGAATC 59.156 50.000 23.37 0.00 42.67 2.52
33 34 2.576191 CAAGGGTCCCTTAGTGGAATCA 59.424 50.000 23.37 0.00 42.67 2.57
34 35 2.197465 AGGGTCCCTTAGTGGAATCAC 58.803 52.381 3.85 0.00 43.93 3.06
35 36 4.953478 AAGGGTCCCTTAGTGGAATCACG 61.953 52.174 22.57 0.00 42.74 4.35
44 45 0.099436 GTGGAATCACGGCATCTTGC 59.901 55.000 0.00 0.00 37.07 4.01
45 46 2.549019 GTGGAATCACGGCATCTTGCA 61.549 52.381 1.50 0.00 38.51 4.08
46 47 3.838371 GTGGAATCACGGCATCTTGCAT 61.838 50.000 1.50 0.00 38.51 3.96
47 48 5.284139 GTGGAATCACGGCATCTTGCATT 62.284 47.826 1.50 0.00 38.51 3.56
60 61 4.465512 GCATTGTGCGAGGGCGTG 62.466 66.667 0.00 0.00 44.10 5.34
61 62 2.741985 CATTGTGCGAGGGCGTGA 60.742 61.111 0.00 0.00 44.10 4.35
62 63 2.434884 ATTGTGCGAGGGCGTGAG 60.435 61.111 0.00 0.00 44.10 3.51
63 64 3.958147 ATTGTGCGAGGGCGTGAGG 62.958 63.158 0.00 0.00 44.10 3.86
65 66 4.803426 GTGCGAGGGCGTGAGGAG 62.803 72.222 0.00 0.00 44.10 3.69
67 68 3.532155 GCGAGGGCGTGAGGAGAT 61.532 66.667 0.00 0.00 40.36 2.75
68 69 3.082579 GCGAGGGCGTGAGGAGATT 62.083 63.158 0.00 0.00 40.36 2.40
69 70 1.735376 GCGAGGGCGTGAGGAGATTA 61.735 60.000 0.00 0.00 40.36 1.75
70 71 0.030908 CGAGGGCGTGAGGAGATTAC 59.969 60.000 0.00 0.00 0.00 1.89
71 72 0.030908 GAGGGCGTGAGGAGATTACG 59.969 60.000 0.00 0.00 40.52 3.18
72 73 1.067582 GGGCGTGAGGAGATTACGG 59.932 63.158 0.00 0.00 38.20 4.02
73 74 1.673808 GGGCGTGAGGAGATTACGGT 61.674 60.000 0.00 0.00 38.20 4.83
74 75 0.527817 GGCGTGAGGAGATTACGGTG 60.528 60.000 0.00 0.00 38.20 4.94
75 76 0.454600 GCGTGAGGAGATTACGGTGA 59.545 55.000 0.00 0.00 38.20 4.02
76 77 1.798079 GCGTGAGGAGATTACGGTGAC 60.798 57.143 0.00 0.00 38.20 3.67
77 78 1.202268 CGTGAGGAGATTACGGTGACC 60.202 57.143 0.00 0.00 34.43 4.02
78 79 1.136500 GTGAGGAGATTACGGTGACCC 59.864 57.143 0.00 0.00 0.00 4.46
79 80 1.006758 TGAGGAGATTACGGTGACCCT 59.993 52.381 0.00 0.00 0.00 4.34
80 81 2.242965 TGAGGAGATTACGGTGACCCTA 59.757 50.000 0.00 0.00 0.00 3.53
81 82 2.885894 GAGGAGATTACGGTGACCCTAG 59.114 54.545 0.00 0.00 0.00 3.02
82 83 2.244252 AGGAGATTACGGTGACCCTAGT 59.756 50.000 0.00 0.00 0.00 2.57
83 84 2.361438 GGAGATTACGGTGACCCTAGTG 59.639 54.545 0.00 0.00 0.00 2.74
84 85 3.022406 GAGATTACGGTGACCCTAGTGT 58.978 50.000 0.00 0.00 0.00 3.55
85 86 3.022406 AGATTACGGTGACCCTAGTGTC 58.978 50.000 0.00 0.00 35.77 3.67
86 87 2.592102 TTACGGTGACCCTAGTGTCT 57.408 50.000 6.90 0.00 36.21 3.41
87 88 2.592102 TACGGTGACCCTAGTGTCTT 57.408 50.000 6.90 0.00 36.21 3.01
88 89 1.254954 ACGGTGACCCTAGTGTCTTC 58.745 55.000 6.90 0.65 36.21 2.87
89 90 1.203025 ACGGTGACCCTAGTGTCTTCT 60.203 52.381 6.90 0.00 36.21 2.85
90 91 1.893801 CGGTGACCCTAGTGTCTTCTT 59.106 52.381 6.90 0.00 36.21 2.52
91 92 2.352814 CGGTGACCCTAGTGTCTTCTTG 60.353 54.545 6.90 0.00 36.21 3.02
92 93 2.028020 GGTGACCCTAGTGTCTTCTTGG 60.028 54.545 6.90 0.00 36.21 3.61
95 96 1.952621 CCCTAGTGTCTTCTTGGGGA 58.047 55.000 5.55 0.00 43.38 4.81
96 97 1.834263 CCCTAGTGTCTTCTTGGGGAG 59.166 57.143 5.55 0.00 43.38 4.30
97 98 1.208293 CCTAGTGTCTTCTTGGGGAGC 59.792 57.143 0.00 0.00 0.00 4.70
98 99 1.902508 CTAGTGTCTTCTTGGGGAGCA 59.097 52.381 0.00 0.00 0.00 4.26
99 100 1.366319 AGTGTCTTCTTGGGGAGCAT 58.634 50.000 0.00 0.00 0.00 3.79
100 101 1.707427 AGTGTCTTCTTGGGGAGCATT 59.293 47.619 0.00 0.00 0.00 3.56
101 102 1.815003 GTGTCTTCTTGGGGAGCATTG 59.185 52.381 0.00 0.00 0.00 2.82
102 103 1.425066 TGTCTTCTTGGGGAGCATTGT 59.575 47.619 0.00 0.00 0.00 2.71
103 104 1.815003 GTCTTCTTGGGGAGCATTGTG 59.185 52.381 0.00 0.00 0.00 3.33
104 105 0.529378 CTTCTTGGGGAGCATTGTGC 59.471 55.000 0.00 0.00 45.46 4.57
105 106 0.899717 TTCTTGGGGAGCATTGTGCC 60.900 55.000 0.00 0.00 46.52 5.01
106 107 1.304713 CTTGGGGAGCATTGTGCCT 60.305 57.895 0.00 0.00 46.52 4.75
107 108 1.304381 TTGGGGAGCATTGTGCCTC 60.304 57.895 0.00 0.00 46.52 4.70
108 109 2.440980 GGGGAGCATTGTGCCTCC 60.441 66.667 10.16 10.16 46.52 4.30
109 110 2.356278 GGGAGCATTGTGCCTCCA 59.644 61.111 16.56 0.00 46.52 3.86
110 111 2.048603 GGGAGCATTGTGCCTCCAC 61.049 63.158 16.56 0.00 46.52 4.02
117 118 4.314440 TGTGCCTCCACACCGCTC 62.314 66.667 0.00 0.00 46.51 5.03
120 121 4.329545 GCCTCCACACCGCTCCAA 62.330 66.667 0.00 0.00 0.00 3.53
121 122 2.429930 CCTCCACACCGCTCCAAA 59.570 61.111 0.00 0.00 0.00 3.28
122 123 1.966451 CCTCCACACCGCTCCAAAC 60.966 63.158 0.00 0.00 0.00 2.93
123 124 2.280524 TCCACACCGCTCCAAACG 60.281 61.111 0.00 0.00 0.00 3.60
136 137 3.194005 TCCAAACGGAGATTAGCATCC 57.806 47.619 0.00 0.00 0.00 3.51
154 155 1.569493 CGCAAGGGTGTGAACTTCG 59.431 57.895 0.00 0.00 37.45 3.79
155 156 1.841663 CGCAAGGGTGTGAACTTCGG 61.842 60.000 0.00 0.00 37.45 4.30
156 157 1.515521 GCAAGGGTGTGAACTTCGGG 61.516 60.000 0.00 0.00 0.00 5.14
157 158 0.107831 CAAGGGTGTGAACTTCGGGA 59.892 55.000 0.00 0.00 0.00 5.14
158 159 1.064825 AAGGGTGTGAACTTCGGGAT 58.935 50.000 0.00 0.00 0.00 3.85
159 160 1.946984 AGGGTGTGAACTTCGGGATA 58.053 50.000 0.00 0.00 0.00 2.59
160 161 1.553704 AGGGTGTGAACTTCGGGATAC 59.446 52.381 0.00 0.00 0.00 2.24
161 162 1.276989 GGGTGTGAACTTCGGGATACA 59.723 52.381 0.00 0.00 39.74 2.29
162 163 2.093128 GGGTGTGAACTTCGGGATACAT 60.093 50.000 0.00 0.00 39.74 2.29
163 164 3.195661 GGTGTGAACTTCGGGATACATC 58.804 50.000 0.00 0.00 39.74 3.06
164 165 2.858344 GTGTGAACTTCGGGATACATCG 59.142 50.000 0.00 0.00 39.74 3.84
165 166 2.494471 TGTGAACTTCGGGATACATCGT 59.506 45.455 0.00 0.00 39.74 3.73
166 167 3.114065 GTGAACTTCGGGATACATCGTC 58.886 50.000 0.00 0.00 39.74 4.20
167 168 2.223409 TGAACTTCGGGATACATCGTCG 60.223 50.000 0.00 0.00 39.74 5.12
168 169 1.386533 ACTTCGGGATACATCGTCGT 58.613 50.000 0.00 0.00 39.74 4.34
169 170 1.332997 ACTTCGGGATACATCGTCGTC 59.667 52.381 0.00 0.00 39.74 4.20
170 171 1.602851 CTTCGGGATACATCGTCGTCT 59.397 52.381 0.00 0.00 39.74 4.18
171 172 1.671979 TCGGGATACATCGTCGTCTT 58.328 50.000 0.00 0.00 39.74 3.01
172 173 1.600957 TCGGGATACATCGTCGTCTTC 59.399 52.381 0.00 0.00 39.74 2.87
173 174 1.659491 CGGGATACATCGTCGTCTTCG 60.659 57.143 0.00 0.00 39.74 3.79
174 175 1.396644 GGATACATCGTCGTCTTCGC 58.603 55.000 0.00 0.00 36.96 4.70
175 176 1.035772 GATACATCGTCGTCTTCGCG 58.964 55.000 0.00 0.00 37.70 5.87
176 177 0.376152 ATACATCGTCGTCTTCGCGT 59.624 50.000 5.77 0.00 37.64 6.01
177 178 0.519792 TACATCGTCGTCTTCGCGTG 60.520 55.000 5.77 0.00 37.64 5.34
178 179 2.874780 ATCGTCGTCTTCGCGTGC 60.875 61.111 5.77 0.00 37.64 5.34
181 182 3.173240 GTCGTCTTCGCGTGCCTC 61.173 66.667 5.77 0.00 36.96 4.70
182 183 4.753877 TCGTCTTCGCGTGCCTCG 62.754 66.667 5.77 6.57 43.12 4.63
184 185 4.719369 GTCTTCGCGTGCCTCGGT 62.719 66.667 5.77 0.00 40.26 4.69
185 186 3.986006 TCTTCGCGTGCCTCGGTT 61.986 61.111 5.77 0.00 40.26 4.44
186 187 2.126228 CTTCGCGTGCCTCGGTTA 60.126 61.111 5.77 0.00 40.26 2.85
187 188 1.518572 CTTCGCGTGCCTCGGTTAT 60.519 57.895 5.77 0.00 40.26 1.89
188 189 1.480219 CTTCGCGTGCCTCGGTTATC 61.480 60.000 5.77 0.00 40.26 1.75
189 190 1.940883 TTCGCGTGCCTCGGTTATCT 61.941 55.000 5.77 0.00 40.26 1.98
190 191 1.944676 CGCGTGCCTCGGTTATCTC 60.945 63.158 0.00 0.00 40.26 2.75
191 192 1.437986 GCGTGCCTCGGTTATCTCT 59.562 57.895 0.99 0.00 40.26 3.10
192 193 0.179108 GCGTGCCTCGGTTATCTCTT 60.179 55.000 0.99 0.00 40.26 2.85
193 194 1.066605 GCGTGCCTCGGTTATCTCTTA 59.933 52.381 0.99 0.00 40.26 2.10
194 195 2.728922 CGTGCCTCGGTTATCTCTTAC 58.271 52.381 0.00 0.00 35.71 2.34
195 196 2.543238 CGTGCCTCGGTTATCTCTTACC 60.543 54.545 0.00 0.00 35.71 2.85
196 197 2.037144 TGCCTCGGTTATCTCTTACCC 58.963 52.381 0.00 0.00 0.00 3.69
197 198 1.000496 GCCTCGGTTATCTCTTACCCG 60.000 57.143 0.00 0.00 39.98 5.28
198 199 2.579873 CCTCGGTTATCTCTTACCCGA 58.420 52.381 0.00 0.00 44.74 5.14
199 200 2.954318 CCTCGGTTATCTCTTACCCGAA 59.046 50.000 0.00 0.00 46.02 4.30
200 201 3.243334 CCTCGGTTATCTCTTACCCGAAC 60.243 52.174 0.00 0.00 46.02 3.95
201 202 3.624777 TCGGTTATCTCTTACCCGAACT 58.375 45.455 0.00 0.00 44.05 3.01
202 203 3.629398 TCGGTTATCTCTTACCCGAACTC 59.371 47.826 0.00 0.00 44.05 3.01
203 204 3.631227 CGGTTATCTCTTACCCGAACTCT 59.369 47.826 0.00 0.00 41.08 3.24
204 205 4.097589 CGGTTATCTCTTACCCGAACTCTT 59.902 45.833 0.00 0.00 41.08 2.85
205 206 5.393896 CGGTTATCTCTTACCCGAACTCTTT 60.394 44.000 0.00 0.00 41.08 2.52
206 207 6.183360 CGGTTATCTCTTACCCGAACTCTTTA 60.183 42.308 0.00 0.00 41.08 1.85
207 208 6.977502 GGTTATCTCTTACCCGAACTCTTTAC 59.022 42.308 0.00 0.00 0.00 2.01
208 209 7.147932 GGTTATCTCTTACCCGAACTCTTTACT 60.148 40.741 0.00 0.00 0.00 2.24
209 210 6.854091 ATCTCTTACCCGAACTCTTTACTT 57.146 37.500 0.00 0.00 0.00 2.24
210 211 7.951347 ATCTCTTACCCGAACTCTTTACTTA 57.049 36.000 0.00 0.00 0.00 2.24
211 212 7.951347 TCTCTTACCCGAACTCTTTACTTAT 57.049 36.000 0.00 0.00 0.00 1.73
212 213 7.769220 TCTCTTACCCGAACTCTTTACTTATG 58.231 38.462 0.00 0.00 0.00 1.90
213 214 6.335777 TCTTACCCGAACTCTTTACTTATGC 58.664 40.000 0.00 0.00 0.00 3.14
214 215 4.546829 ACCCGAACTCTTTACTTATGCA 57.453 40.909 0.00 0.00 0.00 3.96
215 216 4.251268 ACCCGAACTCTTTACTTATGCAC 58.749 43.478 0.00 0.00 0.00 4.57
216 217 4.020485 ACCCGAACTCTTTACTTATGCACT 60.020 41.667 0.00 0.00 0.00 4.40
217 218 4.935808 CCCGAACTCTTTACTTATGCACTT 59.064 41.667 0.00 0.00 0.00 3.16
218 219 5.411669 CCCGAACTCTTTACTTATGCACTTT 59.588 40.000 0.00 0.00 0.00 2.66
219 220 6.592607 CCCGAACTCTTTACTTATGCACTTTA 59.407 38.462 0.00 0.00 0.00 1.85
220 221 7.412672 CCCGAACTCTTTACTTATGCACTTTAC 60.413 40.741 0.00 0.00 0.00 2.01
221 222 7.331193 CCGAACTCTTTACTTATGCACTTTACT 59.669 37.037 0.00 0.00 0.00 2.24
222 223 8.709646 CGAACTCTTTACTTATGCACTTTACTT 58.290 33.333 0.00 0.00 0.00 2.24
225 226 9.338622 ACTCTTTACTTATGCACTTTACTTTGT 57.661 29.630 0.00 0.00 0.00 2.83
226 227 9.599322 CTCTTTACTTATGCACTTTACTTTGTG 57.401 33.333 0.00 0.00 37.26 3.33
227 228 9.332502 TCTTTACTTATGCACTTTACTTTGTGA 57.667 29.630 0.00 0.00 36.38 3.58
231 232 7.752695 ACTTATGCACTTTACTTTGTGATAGC 58.247 34.615 0.00 0.00 36.38 2.97
232 233 5.567138 ATGCACTTTACTTTGTGATAGCC 57.433 39.130 0.00 0.00 36.38 3.93
233 234 4.393834 TGCACTTTACTTTGTGATAGCCA 58.606 39.130 0.00 0.00 36.38 4.75
234 235 5.009631 TGCACTTTACTTTGTGATAGCCAT 58.990 37.500 0.00 0.00 36.38 4.40
235 236 6.176896 TGCACTTTACTTTGTGATAGCCATA 58.823 36.000 0.00 0.00 36.38 2.74
236 237 6.828273 TGCACTTTACTTTGTGATAGCCATAT 59.172 34.615 0.00 0.00 36.38 1.78
237 238 7.339212 TGCACTTTACTTTGTGATAGCCATATT 59.661 33.333 0.00 0.00 36.38 1.28
238 239 7.645340 GCACTTTACTTTGTGATAGCCATATTG 59.355 37.037 0.00 0.00 36.38 1.90
239 240 8.677300 CACTTTACTTTGTGATAGCCATATTGT 58.323 33.333 0.00 0.00 36.38 2.71
240 241 9.243105 ACTTTACTTTGTGATAGCCATATTGTT 57.757 29.630 0.00 0.00 0.00 2.83
243 244 7.944729 ACTTTGTGATAGCCATATTGTTTCT 57.055 32.000 0.00 0.00 0.00 2.52
244 245 8.353423 ACTTTGTGATAGCCATATTGTTTCTT 57.647 30.769 0.00 0.00 0.00 2.52
245 246 8.246180 ACTTTGTGATAGCCATATTGTTTCTTG 58.754 33.333 0.00 0.00 0.00 3.02
246 247 7.701539 TTGTGATAGCCATATTGTTTCTTGT 57.298 32.000 0.00 0.00 0.00 3.16
247 248 7.320443 TGTGATAGCCATATTGTTTCTTGTC 57.680 36.000 0.00 0.00 0.00 3.18
248 249 6.883756 TGTGATAGCCATATTGTTTCTTGTCA 59.116 34.615 0.00 0.00 0.00 3.58
249 250 7.557358 TGTGATAGCCATATTGTTTCTTGTCAT 59.443 33.333 0.00 0.00 0.00 3.06
250 251 9.056005 GTGATAGCCATATTGTTTCTTGTCATA 57.944 33.333 0.00 0.00 0.00 2.15
251 252 9.797642 TGATAGCCATATTGTTTCTTGTCATAT 57.202 29.630 0.00 0.00 0.00 1.78
283 284 8.774890 CTATCACATAGCTGCTTATCTTGATT 57.225 34.615 7.79 0.00 0.00 2.57
284 285 9.866798 CTATCACATAGCTGCTTATCTTGATTA 57.133 33.333 7.79 0.00 0.00 1.75
285 286 8.774890 ATCACATAGCTGCTTATCTTGATTAG 57.225 34.615 7.79 0.00 0.00 1.73
286 287 6.648310 TCACATAGCTGCTTATCTTGATTAGC 59.352 38.462 7.79 12.86 0.00 3.09
287 288 6.426025 CACATAGCTGCTTATCTTGATTAGCA 59.574 38.462 18.94 18.94 41.01 3.49
288 289 7.119407 CACATAGCTGCTTATCTTGATTAGCAT 59.881 37.037 19.91 11.76 42.21 3.79
289 290 8.316946 ACATAGCTGCTTATCTTGATTAGCATA 58.683 33.333 19.91 13.15 42.21 3.14
290 291 9.159364 CATAGCTGCTTATCTTGATTAGCATAA 57.841 33.333 19.91 11.55 42.21 1.90
291 292 7.670009 AGCTGCTTATCTTGATTAGCATAAG 57.330 36.000 19.91 12.34 42.21 1.73
292 293 7.222872 AGCTGCTTATCTTGATTAGCATAAGT 58.777 34.615 19.91 6.91 42.21 2.24
293 294 7.718753 AGCTGCTTATCTTGATTAGCATAAGTT 59.281 33.333 19.91 8.18 42.21 2.66
294 295 7.802251 GCTGCTTATCTTGATTAGCATAAGTTG 59.198 37.037 19.91 11.26 42.21 3.16
295 296 8.737168 TGCTTATCTTGATTAGCATAAGTTGT 57.263 30.769 16.98 0.00 38.61 3.32
296 297 9.177608 TGCTTATCTTGATTAGCATAAGTTGTT 57.822 29.630 16.98 0.00 38.61 2.83
297 298 9.443283 GCTTATCTTGATTAGCATAAGTTGTTG 57.557 33.333 14.33 0.00 32.46 3.33
298 299 9.941664 CTTATCTTGATTAGCATAAGTTGTTGG 57.058 33.333 0.00 0.00 0.00 3.77
299 300 7.944729 ATCTTGATTAGCATAAGTTGTTGGT 57.055 32.000 0.00 0.00 0.00 3.67
300 301 7.144722 TCTTGATTAGCATAAGTTGTTGGTG 57.855 36.000 3.42 0.00 0.00 4.17
301 302 5.309323 TGATTAGCATAAGTTGTTGGTGC 57.691 39.130 3.42 0.00 36.11 5.01
302 303 4.764308 TGATTAGCATAAGTTGTTGGTGCA 59.236 37.500 0.00 0.00 38.23 4.57
303 304 4.497473 TTAGCATAAGTTGTTGGTGCAC 57.503 40.909 8.80 8.80 38.23 4.57
304 305 2.305928 AGCATAAGTTGTTGGTGCACA 58.694 42.857 20.43 1.62 38.23 4.57
305 306 2.892852 AGCATAAGTTGTTGGTGCACAT 59.107 40.909 20.43 0.00 38.23 3.21
306 307 4.078537 AGCATAAGTTGTTGGTGCACATA 58.921 39.130 20.43 3.77 38.23 2.29
307 308 4.156556 AGCATAAGTTGTTGGTGCACATAG 59.843 41.667 20.43 0.00 38.23 2.23
308 309 4.675146 GCATAAGTTGTTGGTGCACATAGG 60.675 45.833 20.43 1.52 35.93 2.57
309 310 2.656947 AGTTGTTGGTGCACATAGGT 57.343 45.000 20.43 0.00 0.00 3.08
327 328 4.287766 AGGTGAGCCTAGTTGTTTTAGG 57.712 45.455 0.00 0.00 44.90 2.69
328 329 3.651423 AGGTGAGCCTAGTTGTTTTAGGT 59.349 43.478 0.77 0.00 44.90 3.08
329 330 4.104261 AGGTGAGCCTAGTTGTTTTAGGTT 59.896 41.667 0.77 0.00 44.90 3.50
330 331 4.825634 GGTGAGCCTAGTTGTTTTAGGTTT 59.174 41.667 0.77 0.00 39.91 3.27
331 332 5.301045 GGTGAGCCTAGTTGTTTTAGGTTTT 59.699 40.000 0.77 0.00 39.91 2.43
332 333 6.206498 GTGAGCCTAGTTGTTTTAGGTTTTG 58.794 40.000 0.77 0.00 39.91 2.44
333 334 5.889289 TGAGCCTAGTTGTTTTAGGTTTTGT 59.111 36.000 0.77 0.00 39.91 2.83
334 335 6.144078 AGCCTAGTTGTTTTAGGTTTTGTG 57.856 37.500 0.77 0.00 39.91 3.33
335 336 4.743151 GCCTAGTTGTTTTAGGTTTTGTGC 59.257 41.667 0.77 0.00 39.91 4.57
336 337 5.451381 GCCTAGTTGTTTTAGGTTTTGTGCT 60.451 40.000 0.77 0.00 39.91 4.40
337 338 6.569780 CCTAGTTGTTTTAGGTTTTGTGCTT 58.430 36.000 0.00 0.00 34.27 3.91
338 339 6.475402 CCTAGTTGTTTTAGGTTTTGTGCTTG 59.525 38.462 0.00 0.00 34.27 4.01
339 340 6.031751 AGTTGTTTTAGGTTTTGTGCTTGA 57.968 33.333 0.00 0.00 0.00 3.02
340 341 5.867174 AGTTGTTTTAGGTTTTGTGCTTGAC 59.133 36.000 0.00 0.00 0.00 3.18
341 342 5.392767 TGTTTTAGGTTTTGTGCTTGACA 57.607 34.783 0.00 0.00 0.00 3.58
342 343 5.784177 TGTTTTAGGTTTTGTGCTTGACAA 58.216 33.333 0.00 0.00 43.11 3.18
351 352 3.006659 TGTGCTTGACAAATTAACCGC 57.993 42.857 0.00 0.00 0.00 5.68
352 353 2.621055 TGTGCTTGACAAATTAACCGCT 59.379 40.909 0.00 0.00 0.00 5.52
353 354 3.815962 TGTGCTTGACAAATTAACCGCTA 59.184 39.130 0.00 0.00 0.00 4.26
354 355 4.083537 TGTGCTTGACAAATTAACCGCTAG 60.084 41.667 0.00 0.00 0.00 3.42
355 356 3.438781 TGCTTGACAAATTAACCGCTAGG 59.561 43.478 0.00 0.00 45.13 3.02
366 367 3.372795 CCGCTAGGTTTATTCCGCA 57.627 52.632 0.00 0.00 0.00 5.69
367 368 1.878953 CCGCTAGGTTTATTCCGCAT 58.121 50.000 0.00 0.00 0.00 4.73
368 369 2.218603 CCGCTAGGTTTATTCCGCATT 58.781 47.619 0.00 0.00 0.00 3.56
369 370 2.616842 CCGCTAGGTTTATTCCGCATTT 59.383 45.455 0.00 0.00 0.00 2.32
370 371 3.548014 CCGCTAGGTTTATTCCGCATTTG 60.548 47.826 0.00 0.00 0.00 2.32
371 372 3.064820 CGCTAGGTTTATTCCGCATTTGT 59.935 43.478 0.00 0.00 0.00 2.83
372 373 4.438200 CGCTAGGTTTATTCCGCATTTGTT 60.438 41.667 0.00 0.00 0.00 2.83
373 374 5.407502 GCTAGGTTTATTCCGCATTTGTTT 58.592 37.500 0.00 0.00 0.00 2.83
374 375 6.557110 GCTAGGTTTATTCCGCATTTGTTTA 58.443 36.000 0.00 0.00 0.00 2.01
375 376 7.030768 GCTAGGTTTATTCCGCATTTGTTTAA 58.969 34.615 0.00 0.00 0.00 1.52
376 377 7.220108 GCTAGGTTTATTCCGCATTTGTTTAAG 59.780 37.037 0.00 0.00 0.00 1.85
377 378 5.867174 AGGTTTATTCCGCATTTGTTTAAGC 59.133 36.000 0.00 0.00 0.00 3.09
378 379 5.062934 GGTTTATTCCGCATTTGTTTAAGCC 59.937 40.000 0.00 0.00 0.00 4.35
379 380 5.652994 TTATTCCGCATTTGTTTAAGCCT 57.347 34.783 0.00 0.00 0.00 4.58
380 381 6.761099 TTATTCCGCATTTGTTTAAGCCTA 57.239 33.333 0.00 0.00 0.00 3.93
381 382 5.652994 ATTCCGCATTTGTTTAAGCCTAA 57.347 34.783 0.00 0.00 0.00 2.69
382 383 5.455056 TTCCGCATTTGTTTAAGCCTAAA 57.545 34.783 0.00 0.00 0.00 1.85
383 384 5.652994 TCCGCATTTGTTTAAGCCTAAAT 57.347 34.783 0.00 0.00 29.86 1.40
384 385 5.646606 TCCGCATTTGTTTAAGCCTAAATC 58.353 37.500 0.00 0.00 29.86 2.17
385 386 4.499040 CCGCATTTGTTTAAGCCTAAATCG 59.501 41.667 0.00 0.00 29.86 3.34
386 387 5.092781 CGCATTTGTTTAAGCCTAAATCGT 58.907 37.500 0.00 0.00 29.86 3.73
387 388 6.252281 CGCATTTGTTTAAGCCTAAATCGTA 58.748 36.000 0.00 0.00 29.86 3.43
388 389 6.743627 CGCATTTGTTTAAGCCTAAATCGTAA 59.256 34.615 0.00 0.00 29.86 3.18
389 390 7.431084 CGCATTTGTTTAAGCCTAAATCGTAAT 59.569 33.333 0.00 0.00 29.86 1.89
390 391 9.083080 GCATTTGTTTAAGCCTAAATCGTAATT 57.917 29.630 0.00 0.00 29.86 1.40
412 413 8.936070 AATTATTTTAAAACGCCTATTCACCC 57.064 30.769 1.97 0.00 0.00 4.61
413 414 4.787260 TTTTAAAACGCCTATTCACCCC 57.213 40.909 0.00 0.00 0.00 4.95
414 415 2.423446 TAAAACGCCTATTCACCCCC 57.577 50.000 0.00 0.00 0.00 5.40
429 430 3.460995 CCCCCTCTAGGCGACATC 58.539 66.667 0.00 0.00 0.00 3.06
430 431 2.210711 CCCCCTCTAGGCGACATCC 61.211 68.421 0.00 0.00 0.00 3.51
431 432 1.457643 CCCCTCTAGGCGACATCCA 60.458 63.158 0.00 0.00 0.00 3.41
432 433 1.742768 CCCTCTAGGCGACATCCAC 59.257 63.158 0.00 0.00 0.00 4.02
433 434 1.360551 CCTCTAGGCGACATCCACG 59.639 63.158 0.00 0.00 0.00 4.94
434 435 1.101635 CCTCTAGGCGACATCCACGA 61.102 60.000 0.00 0.00 0.00 4.35
435 436 0.955178 CTCTAGGCGACATCCACGAT 59.045 55.000 0.00 0.00 0.00 3.73
436 437 0.952280 TCTAGGCGACATCCACGATC 59.048 55.000 0.00 0.00 0.00 3.69
437 438 0.955178 CTAGGCGACATCCACGATCT 59.045 55.000 0.00 0.00 0.00 2.75
438 439 1.338337 CTAGGCGACATCCACGATCTT 59.662 52.381 0.00 0.00 0.00 2.40
439 440 0.537188 AGGCGACATCCACGATCTTT 59.463 50.000 0.00 0.00 0.00 2.52
440 441 0.931005 GGCGACATCCACGATCTTTC 59.069 55.000 0.00 0.00 0.00 2.62
459 460 1.138464 TCACAATGGCAAAAGCAGCAA 59.862 42.857 0.00 0.00 0.00 3.91
467 468 1.740043 GCAAAAGCAGCAACACCAACT 60.740 47.619 0.00 0.00 0.00 3.16
472 473 2.586425 AGCAGCAACACCAACTACAAT 58.414 42.857 0.00 0.00 0.00 2.71
476 477 5.943416 AGCAGCAACACCAACTACAATAATA 59.057 36.000 0.00 0.00 0.00 0.98
484 485 6.603201 ACACCAACTACAATAATAGCAGCAAT 59.397 34.615 0.00 0.00 0.00 3.56
493 494 6.183360 ACAATAATAGCAGCAATGGCAAAGAT 60.183 34.615 0.00 0.00 44.61 2.40
494 495 7.014518 ACAATAATAGCAGCAATGGCAAAGATA 59.985 33.333 0.00 0.00 44.61 1.98
501 502 3.639561 AGCAATGGCAAAGATATGATGCA 59.360 39.130 0.00 0.00 44.61 3.96
502 503 3.739300 GCAATGGCAAAGATATGATGCAC 59.261 43.478 0.00 0.00 41.80 4.57
503 504 3.909776 ATGGCAAAGATATGATGCACG 57.090 42.857 0.00 0.00 41.80 5.34
504 505 2.642427 TGGCAAAGATATGATGCACGT 58.358 42.857 0.00 0.00 41.80 4.49
510 511 1.613925 AGATATGATGCACGTACGGCT 59.386 47.619 21.06 9.71 0.00 5.52
535 536 4.634004 CCGTATGACTAAGCACAAATCCAA 59.366 41.667 0.00 0.00 0.00 3.53
536 537 5.296780 CCGTATGACTAAGCACAAATCCAAT 59.703 40.000 0.00 0.00 0.00 3.16
537 538 6.194463 CGTATGACTAAGCACAAATCCAATG 58.806 40.000 0.00 0.00 0.00 2.82
538 539 6.037062 CGTATGACTAAGCACAAATCCAATGA 59.963 38.462 0.00 0.00 0.00 2.57
540 541 4.156556 TGACTAAGCACAAATCCAATGAGC 59.843 41.667 0.00 0.00 35.05 4.26
541 542 4.338879 ACTAAGCACAAATCCAATGAGCT 58.661 39.130 0.00 0.00 44.82 4.09
543 544 4.708726 AAGCACAAATCCAATGAGCTAC 57.291 40.909 0.00 0.00 42.63 3.58
544 545 3.689347 AGCACAAATCCAATGAGCTACA 58.311 40.909 0.00 0.00 41.84 2.74
546 547 4.097437 AGCACAAATCCAATGAGCTACATG 59.903 41.667 0.00 0.00 41.84 3.21
547 548 4.142315 GCACAAATCCAATGAGCTACATGT 60.142 41.667 2.69 2.69 39.39 3.21
563 567 4.829064 ACATGTTTAACGTGCAACAGAT 57.171 36.364 16.24 6.17 38.65 2.90
565 569 4.274705 ACATGTTTAACGTGCAACAGATGA 59.725 37.500 16.24 0.00 38.65 2.92
566 570 5.048782 ACATGTTTAACGTGCAACAGATGAT 60.049 36.000 16.24 0.00 38.65 2.45
567 571 5.029650 TGTTTAACGTGCAACAGATGATC 57.970 39.130 8.38 0.00 35.74 2.92
568 572 4.754618 TGTTTAACGTGCAACAGATGATCT 59.245 37.500 8.38 0.00 35.74 2.75
569 573 5.929415 TGTTTAACGTGCAACAGATGATCTA 59.071 36.000 8.38 0.00 35.74 1.98
570 574 6.090763 TGTTTAACGTGCAACAGATGATCTAG 59.909 38.462 8.38 0.00 35.74 2.43
571 575 3.170791 ACGTGCAACAGATGATCTAGG 57.829 47.619 0.00 0.00 35.74 3.02
572 576 1.863454 CGTGCAACAGATGATCTAGGC 59.137 52.381 0.00 0.00 35.74 3.93
573 577 1.863454 GTGCAACAGATGATCTAGGCG 59.137 52.381 0.00 0.00 36.32 5.52
574 578 1.202568 TGCAACAGATGATCTAGGCGG 60.203 52.381 0.00 0.00 0.00 6.13
575 579 1.202580 GCAACAGATGATCTAGGCGGT 60.203 52.381 0.00 0.00 0.00 5.68
576 580 2.477825 CAACAGATGATCTAGGCGGTG 58.522 52.381 0.00 0.00 0.00 4.94
577 581 0.390860 ACAGATGATCTAGGCGGTGC 59.609 55.000 0.00 0.00 0.00 5.01
669 673 5.957842 TTGAACCATTCATCTTGTGGTAC 57.042 39.130 0.00 0.00 45.10 3.34
679 683 4.387559 TCATCTTGTGGTACGATGAAAACG 59.612 41.667 7.64 0.00 40.20 3.60
681 685 4.869215 TCTTGTGGTACGATGAAAACGTA 58.131 39.130 0.00 0.00 45.94 3.57
691 695 6.627690 ACGATGAAAACGTACTGTAGATTG 57.372 37.500 0.00 0.00 45.94 2.67
692 696 6.154445 ACGATGAAAACGTACTGTAGATTGT 58.846 36.000 0.00 0.00 45.94 2.71
693 697 6.307318 ACGATGAAAACGTACTGTAGATTGTC 59.693 38.462 0.00 0.00 45.94 3.18
694 698 6.237490 CGATGAAAACGTACTGTAGATTGTCC 60.237 42.308 0.00 0.00 0.00 4.02
695 699 5.232463 TGAAAACGTACTGTAGATTGTCCC 58.768 41.667 0.00 0.00 0.00 4.46
696 700 5.011329 TGAAAACGTACTGTAGATTGTCCCT 59.989 40.000 0.00 0.00 0.00 4.20
697 701 4.715527 AACGTACTGTAGATTGTCCCTC 57.284 45.455 0.00 0.00 0.00 4.30
698 702 3.022406 ACGTACTGTAGATTGTCCCTCC 58.978 50.000 0.00 0.00 0.00 4.30
699 703 3.288964 CGTACTGTAGATTGTCCCTCCT 58.711 50.000 0.00 0.00 0.00 3.69
765 1103 4.736168 GCAAAAGTTGTTGTATCTGCACCA 60.736 41.667 0.00 0.00 0.00 4.17
859 1205 1.614051 GGCCTCACAATCACATCACCA 60.614 52.381 0.00 0.00 0.00 4.17
889 1237 1.964448 TCGGCCATCGATCGCTTAT 59.036 52.632 14.74 0.00 43.74 1.73
892 2516 2.120232 CGGCCATCGATCGCTTATATC 58.880 52.381 14.74 0.00 42.43 1.63
947 2578 2.306341 AGCATCTCGATCAACACCAG 57.694 50.000 0.00 0.00 0.00 4.00
950 2581 0.532573 ATCTCGATCAACACCAGCGT 59.467 50.000 0.00 0.00 0.00 5.07
969 2610 3.243434 GCGTCCATCAACTAGCTAGCTAA 60.243 47.826 24.20 10.87 0.00 3.09
1098 2808 5.481105 CAAGATCTAGAGAAGGATGATGCC 58.519 45.833 0.00 0.00 0.00 4.40
1138 2851 3.396911 TACTCGAAGCTCTGCGGCG 62.397 63.158 0.51 0.51 37.29 6.46
1345 3058 2.313267 GGCAACAAGACGGTCGAAA 58.687 52.632 1.89 0.00 0.00 3.46
1355 3068 2.875933 AGACGGTCGAAAAATTTGCTGA 59.124 40.909 1.89 0.00 0.00 4.26
1359 3072 3.623863 GGTCGAAAAATTTGCTGACGAA 58.376 40.909 0.00 0.00 0.00 3.85
1368 3081 2.162319 TTGCTGACGAACACTGCATA 57.838 45.000 0.00 0.00 40.59 3.14
1466 3179 4.088634 AGATTTTGCTACATCAAGGCCAA 58.911 39.130 5.01 0.00 0.00 4.52
1473 3186 3.661648 ATCAAGGCCAACCCCGCT 61.662 61.111 5.01 0.00 36.11 5.52
1476 3189 3.661648 AAGGCCAACCCCGCTGAT 61.662 61.111 5.01 0.00 36.11 2.90
1662 4174 5.193728 AGGCTTCCTTTGGTTCATATAGGAA 59.806 40.000 0.00 0.00 41.42 3.36
1663 4175 5.891551 GGCTTCCTTTGGTTCATATAGGAAA 59.108 40.000 0.58 0.00 42.63 3.13
1721 4251 9.837525 GATGGCATGTATCTCAAAAATAGATTC 57.162 33.333 3.81 0.00 35.36 2.52
1722 4252 8.985315 TGGCATGTATCTCAAAAATAGATTCT 57.015 30.769 0.00 0.00 35.36 2.40
1723 4253 9.060347 TGGCATGTATCTCAAAAATAGATTCTC 57.940 33.333 0.00 0.00 35.36 2.87
1724 4254 9.282569 GGCATGTATCTCAAAAATAGATTCTCT 57.717 33.333 0.00 0.00 35.36 3.10
1777 4307 1.929836 CATCGAGGCTGTTAGAGTTGC 59.070 52.381 0.00 0.00 0.00 4.17
1782 4312 1.352156 GGCTGTTAGAGTTGCGTCGG 61.352 60.000 0.00 0.00 0.00 4.79
1790 4320 7.205737 TGTTAGAGTTGCGTCGGATATTATA 57.794 36.000 0.00 0.00 0.00 0.98
1796 4326 7.120873 AGAGTTGCGTCGGATATTATAGTACAT 59.879 37.037 0.00 0.00 0.00 2.29
1797 4327 7.027760 AGTTGCGTCGGATATTATAGTACATG 58.972 38.462 0.00 0.00 0.00 3.21
1823 4354 8.971073 GGTAGGTTATAGTTGGACTTGTAGTTA 58.029 37.037 0.00 0.00 0.00 2.24
1883 4414 5.094569 AGGACACTTATATCCTAGGCCTT 57.905 43.478 12.58 0.00 43.85 4.35
1914 4445 7.904558 ATGATGGGATAGACACACGATATAT 57.095 36.000 0.00 0.00 33.41 0.86
1919 4450 7.583625 TGGGATAGACACACGATATATCCTAT 58.416 38.462 7.15 6.84 41.05 2.57
1940 4471 0.951558 CCAACATAATAGCACGGGCC 59.048 55.000 5.73 0.00 42.56 5.80
1941 4472 0.951558 CAACATAATAGCACGGGCCC 59.048 55.000 13.57 13.57 42.56 5.80
2000 4531 1.469251 CGAGTGCTGTATTGTAGCGGT 60.469 52.381 0.00 0.00 44.01 5.68
2007 4538 3.780902 CTGTATTGTAGCGGTGTCATGA 58.219 45.455 0.00 0.00 0.00 3.07
2011 4542 0.817654 TGTAGCGGTGTCATGAGGAG 59.182 55.000 0.00 0.00 0.00 3.69
2020 4551 4.598894 CATGAGGAGGAGCGCCCG 62.599 72.222 2.29 0.00 40.87 6.13
2025 4556 3.459063 GGAGGAGCGCCCGTAGTT 61.459 66.667 2.29 0.00 40.87 2.24
2033 4564 4.414732 GCCCGTAGTTAGGCTTCG 57.585 61.111 0.00 0.00 46.14 3.79
2074 4605 3.991773 TGAACCTCGTTAACAAATCTCGG 59.008 43.478 6.39 0.00 0.00 4.63
2077 4608 3.243975 ACCTCGTTAACAAATCTCGGTGT 60.244 43.478 6.39 0.00 0.00 4.16
2091 4622 3.702555 GTGTCGTGCTCGTGTGGC 61.703 66.667 8.17 0.00 38.33 5.01
2101 4632 2.281070 CGTGTGGCTGCTTGGTCT 60.281 61.111 0.00 0.00 0.00 3.85
2104 4635 1.597854 TGTGGCTGCTTGGTCTTCG 60.598 57.895 0.00 0.00 0.00 3.79
2115 4646 0.380733 TGGTCTTCGGATGATCGACG 59.619 55.000 0.00 0.00 39.01 5.12
2116 4647 0.317938 GGTCTTCGGATGATCGACGG 60.318 60.000 0.00 0.00 39.01 4.79
2128 4659 4.143333 CGACGGTGGCCTCGGATT 62.143 66.667 18.10 0.41 0.00 3.01
2228 4781 9.851686 AATGAAAGGGCTCTAAAGAAAATTTTT 57.148 25.926 4.63 0.00 0.00 1.94
2255 4853 5.893824 ACAAAATTCCTATCCTTTAGGCCAG 59.106 40.000 5.01 0.00 34.74 4.85
2325 4923 1.063070 TTGGTACAGGTCCTTGGCCA 61.063 55.000 0.00 0.00 42.39 5.36
2326 4924 0.844661 TGGTACAGGTCCTTGGCCAT 60.845 55.000 6.09 0.00 0.00 4.40
2327 4925 0.394352 GGTACAGGTCCTTGGCCATG 60.394 60.000 6.09 9.47 0.00 3.66
2328 4926 1.032114 GTACAGGTCCTTGGCCATGC 61.032 60.000 6.09 0.00 0.00 4.06
2329 4927 1.207488 TACAGGTCCTTGGCCATGCT 61.207 55.000 6.09 0.00 0.00 3.79
2330 4928 1.207488 ACAGGTCCTTGGCCATGCTA 61.207 55.000 6.09 0.00 0.00 3.49
2331 4929 0.465097 CAGGTCCTTGGCCATGCTAG 60.465 60.000 6.09 0.00 0.00 3.42
2332 4930 0.621571 AGGTCCTTGGCCATGCTAGA 60.622 55.000 6.09 0.00 0.00 2.43
2333 4931 0.179034 GGTCCTTGGCCATGCTAGAG 60.179 60.000 6.09 0.00 0.00 2.43
2376 5001 4.141779 CCCTTCACTTTAAGGCTATACGGT 60.142 45.833 0.00 0.00 44.07 4.83
2377 5002 4.809426 CCTTCACTTTAAGGCTATACGGTG 59.191 45.833 0.00 0.00 39.69 4.94
2420 6977 6.312426 CACTAGCTCTGTTGGAAATACTCAAG 59.688 42.308 0.00 0.00 0.00 3.02
2425 6982 6.187727 TCTGTTGGAAATACTCAAGTCCTT 57.812 37.500 0.00 0.00 0.00 3.36
2427 6984 5.935945 TGTTGGAAATACTCAAGTCCTTGA 58.064 37.500 9.25 9.25 46.27 3.02
2437 6994 3.415212 TCAAGTCCTTGAAGGCATTCTG 58.585 45.455 12.92 5.30 45.56 3.02
2438 6995 3.152341 CAAGTCCTTGAAGGCATTCTGT 58.848 45.455 12.92 0.00 42.93 3.41
2441 6998 2.485814 GTCCTTGAAGGCATTCTGTCAC 59.514 50.000 12.92 0.84 34.61 3.67
2443 7000 2.486982 CCTTGAAGGCATTCTGTCACTG 59.513 50.000 12.92 0.00 36.33 3.66
2473 7034 2.421424 GACCTTAGCTGCATGTGGAAAG 59.579 50.000 1.02 0.00 0.00 2.62
2479 7040 1.135460 GCTGCATGTGGAAAGAAGCTC 60.135 52.381 0.00 0.00 0.00 4.09
2497 7058 4.140536 AGCTCTTTCTGCAAAAGTAGCTT 58.859 39.130 23.08 15.84 37.41 3.74
2501 7062 6.207691 TCTTTCTGCAAAAGTAGCTTGTTT 57.792 33.333 16.01 0.00 0.00 2.83
2502 7063 6.630071 TCTTTCTGCAAAAGTAGCTTGTTTT 58.370 32.000 16.01 0.00 0.00 2.43
2503 7064 7.096551 TCTTTCTGCAAAAGTAGCTTGTTTTT 58.903 30.769 16.01 0.00 0.00 1.94
2526 7087 7.801716 TTTTTCTAGTACAGATGCAAGTGTT 57.198 32.000 9.38 0.00 31.77 3.32
2527 7088 7.801716 TTTTCTAGTACAGATGCAAGTGTTT 57.198 32.000 9.38 2.68 31.77 2.83
2528 7089 8.896320 TTTTCTAGTACAGATGCAAGTGTTTA 57.104 30.769 9.38 3.56 31.77 2.01
2529 7090 9.502091 TTTTCTAGTACAGATGCAAGTGTTTAT 57.498 29.630 9.38 0.52 31.77 1.40
2537 7098 8.018677 ACAGATGCAAGTGTTTATATATACGC 57.981 34.615 8.36 8.36 0.00 4.42
2538 7099 7.148804 ACAGATGCAAGTGTTTATATATACGCG 60.149 37.037 3.53 3.53 0.00 6.01
2539 7100 5.258685 TGCAAGTGTTTATATATACGCGC 57.741 39.130 5.73 0.00 0.00 6.86
2540 7101 4.745620 TGCAAGTGTTTATATATACGCGCA 59.254 37.500 5.73 12.12 0.00 6.09
2541 7102 5.407084 TGCAAGTGTTTATATATACGCGCAT 59.593 36.000 5.73 0.00 0.00 4.73
2542 7103 6.586844 TGCAAGTGTTTATATATACGCGCATA 59.413 34.615 5.73 2.88 0.00 3.14
2543 7104 6.892951 GCAAGTGTTTATATATACGCGCATAC 59.107 38.462 5.73 0.00 0.00 2.39
2544 7105 7.411049 GCAAGTGTTTATATATACGCGCATACA 60.411 37.037 5.73 0.00 0.00 2.29
2545 7106 8.592155 CAAGTGTTTATATATACGCGCATACAT 58.408 33.333 5.73 0.00 0.00 2.29
2546 7107 8.697846 AGTGTTTATATATACGCGCATACATT 57.302 30.769 5.73 0.00 0.00 2.71
2547 7108 8.804743 AGTGTTTATATATACGCGCATACATTC 58.195 33.333 5.73 0.00 0.00 2.67
2548 7109 8.588789 GTGTTTATATATACGCGCATACATTCA 58.411 33.333 5.73 0.00 0.00 2.57
2549 7110 8.588789 TGTTTATATATACGCGCATACATTCAC 58.411 33.333 5.73 0.00 0.00 3.18
2550 7111 7.688478 TTATATATACGCGCATACATTCACC 57.312 36.000 5.73 0.00 0.00 4.02
2551 7112 1.508632 ATACGCGCATACATTCACCC 58.491 50.000 5.73 0.00 0.00 4.61
2552 7113 0.872451 TACGCGCATACATTCACCCG 60.872 55.000 5.73 0.00 0.00 5.28
2553 7114 2.171079 CGCGCATACATTCACCCGT 61.171 57.895 8.75 0.00 0.00 5.28
2554 7115 0.872451 CGCGCATACATTCACCCGTA 60.872 55.000 8.75 0.00 0.00 4.02
2555 7116 1.508632 GCGCATACATTCACCCGTAT 58.491 50.000 0.30 0.00 0.00 3.06
2556 7117 1.194547 GCGCATACATTCACCCGTATG 59.805 52.381 0.30 0.00 45.07 2.39
2557 7118 2.749776 CGCATACATTCACCCGTATGA 58.250 47.619 12.46 0.00 45.09 2.15
2558 7119 3.127589 CGCATACATTCACCCGTATGAA 58.872 45.455 12.46 1.50 45.09 2.57
2559 7120 3.059868 CGCATACATTCACCCGTATGAAC 60.060 47.826 12.46 0.00 45.09 3.18
2560 7121 3.874543 GCATACATTCACCCGTATGAACA 59.125 43.478 12.46 0.00 45.09 3.18
2561 7122 4.260620 GCATACATTCACCCGTATGAACAC 60.261 45.833 12.46 0.00 45.09 3.32
2562 7123 3.410631 ACATTCACCCGTATGAACACA 57.589 42.857 1.05 0.00 41.29 3.72
2563 7124 3.071479 ACATTCACCCGTATGAACACAC 58.929 45.455 1.05 0.00 41.29 3.82
2564 7125 2.912690 TTCACCCGTATGAACACACA 57.087 45.000 0.00 0.00 33.62 3.72
2565 7126 2.157834 TCACCCGTATGAACACACAC 57.842 50.000 0.00 0.00 0.00 3.82
2566 7127 1.413077 TCACCCGTATGAACACACACA 59.587 47.619 0.00 0.00 0.00 3.72
2567 7128 1.529438 CACCCGTATGAACACACACAC 59.471 52.381 0.00 0.00 0.00 3.82
2568 7129 0.787787 CCCGTATGAACACACACACG 59.212 55.000 0.00 0.00 0.00 4.49
2569 7130 0.162933 CCGTATGAACACACACACGC 59.837 55.000 0.00 0.00 0.00 5.34
2570 7131 0.855995 CGTATGAACACACACACGCA 59.144 50.000 0.00 0.00 0.00 5.24
2571 7132 1.459209 CGTATGAACACACACACGCAT 59.541 47.619 0.00 0.00 0.00 4.73
2572 7133 2.664085 CGTATGAACACACACACGCATA 59.336 45.455 0.00 0.00 0.00 3.14
2573 7134 3.305897 CGTATGAACACACACACGCATAT 59.694 43.478 0.00 0.00 0.00 1.78
2574 7135 4.548156 CGTATGAACACACACACGCATATC 60.548 45.833 0.00 0.00 0.00 1.63
2575 7136 2.073056 TGAACACACACACGCATATCC 58.927 47.619 0.00 0.00 0.00 2.59
2576 7137 2.289382 TGAACACACACACGCATATCCT 60.289 45.455 0.00 0.00 0.00 3.24
2577 7138 3.056465 TGAACACACACACGCATATCCTA 60.056 43.478 0.00 0.00 0.00 2.94
2578 7139 2.888594 ACACACACACGCATATCCTAC 58.111 47.619 0.00 0.00 0.00 3.18
2579 7140 2.201732 CACACACACGCATATCCTACC 58.798 52.381 0.00 0.00 0.00 3.18
2580 7141 2.108168 ACACACACGCATATCCTACCT 58.892 47.619 0.00 0.00 0.00 3.08
2581 7142 2.100916 ACACACACGCATATCCTACCTC 59.899 50.000 0.00 0.00 0.00 3.85
2582 7143 2.362397 CACACACGCATATCCTACCTCT 59.638 50.000 0.00 0.00 0.00 3.69
2583 7144 3.568430 CACACACGCATATCCTACCTCTA 59.432 47.826 0.00 0.00 0.00 2.43
2584 7145 4.218635 CACACACGCATATCCTACCTCTAT 59.781 45.833 0.00 0.00 0.00 1.98
2585 7146 4.218635 ACACACGCATATCCTACCTCTATG 59.781 45.833 0.00 0.00 0.00 2.23
2586 7147 4.459337 CACACGCATATCCTACCTCTATGA 59.541 45.833 0.00 0.00 0.00 2.15
2587 7148 4.702612 ACACGCATATCCTACCTCTATGAG 59.297 45.833 0.00 0.00 0.00 2.90
2588 7149 3.697045 ACGCATATCCTACCTCTATGAGC 59.303 47.826 0.00 0.00 0.00 4.26
2589 7150 3.696548 CGCATATCCTACCTCTATGAGCA 59.303 47.826 0.00 0.00 0.00 4.26
2590 7151 4.439426 CGCATATCCTACCTCTATGAGCAC 60.439 50.000 0.00 0.00 0.00 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 0.912486 CCACTAAGGGACCCTTGAGG 59.088 60.000 32.64 25.44 44.44 3.86
10 11 1.952621 TCCACTAAGGGACCCTTGAG 58.047 55.000 32.64 25.21 44.44 3.02
11 12 2.426431 TTCCACTAAGGGACCCTTGA 57.574 50.000 32.64 19.60 44.44 3.02
12 13 2.576191 TGATTCCACTAAGGGACCCTTG 59.424 50.000 32.64 23.71 44.44 3.61
13 14 2.576648 GTGATTCCACTAAGGGACCCTT 59.423 50.000 28.79 28.79 39.30 3.95
14 15 2.197465 GTGATTCCACTAAGGGACCCT 58.803 52.381 7.44 7.44 40.10 4.34
15 16 1.134491 CGTGATTCCACTAAGGGACCC 60.134 57.143 0.59 0.59 41.06 4.46
16 17 1.134491 CCGTGATTCCACTAAGGGACC 60.134 57.143 0.00 0.00 41.06 4.46
17 18 1.742750 GCCGTGATTCCACTAAGGGAC 60.743 57.143 0.00 0.00 41.06 4.46
18 19 0.539986 GCCGTGATTCCACTAAGGGA 59.460 55.000 0.00 0.00 41.06 4.20
19 20 0.251916 TGCCGTGATTCCACTAAGGG 59.748 55.000 0.00 0.00 41.06 3.95
20 21 2.158900 AGATGCCGTGATTCCACTAAGG 60.159 50.000 0.00 0.00 41.06 2.69
21 22 3.185246 AGATGCCGTGATTCCACTAAG 57.815 47.619 0.00 0.00 41.06 2.18
22 23 3.270027 CAAGATGCCGTGATTCCACTAA 58.730 45.455 0.00 0.00 41.06 2.24
23 24 2.905075 CAAGATGCCGTGATTCCACTA 58.095 47.619 0.00 0.00 41.06 2.74
24 25 1.742761 CAAGATGCCGTGATTCCACT 58.257 50.000 0.00 0.00 41.06 4.00
25 26 0.099436 GCAAGATGCCGTGATTCCAC 59.901 55.000 0.00 0.00 37.42 4.02
26 27 0.322366 TGCAAGATGCCGTGATTCCA 60.322 50.000 0.00 0.00 44.23 3.53
27 28 1.027357 ATGCAAGATGCCGTGATTCC 58.973 50.000 0.00 0.00 44.23 3.01
28 29 2.159338 ACAATGCAAGATGCCGTGATTC 60.159 45.455 0.00 0.00 44.23 2.52
29 30 1.820519 ACAATGCAAGATGCCGTGATT 59.179 42.857 0.00 0.00 44.23 2.57
30 31 1.133598 CACAATGCAAGATGCCGTGAT 59.866 47.619 9.64 0.00 44.23 3.06
31 32 0.522626 CACAATGCAAGATGCCGTGA 59.477 50.000 9.64 0.00 44.23 4.35
32 33 1.074319 GCACAATGCAAGATGCCGTG 61.074 55.000 7.93 10.47 44.23 4.94
33 34 1.213537 GCACAATGCAAGATGCCGT 59.786 52.632 7.93 0.00 44.23 5.68
34 35 1.870458 CGCACAATGCAAGATGCCG 60.870 57.895 12.27 5.65 45.36 5.69
35 36 0.524816 CTCGCACAATGCAAGATGCC 60.525 55.000 12.27 0.00 45.36 4.40
36 37 0.524816 CCTCGCACAATGCAAGATGC 60.525 55.000 8.87 8.87 45.36 3.91
37 38 0.099968 CCCTCGCACAATGCAAGATG 59.900 55.000 0.00 0.00 45.36 2.90
38 39 1.660560 GCCCTCGCACAATGCAAGAT 61.661 55.000 0.00 0.00 45.36 2.40
39 40 2.334946 GCCCTCGCACAATGCAAGA 61.335 57.895 0.00 0.00 45.36 3.02
40 41 2.180017 GCCCTCGCACAATGCAAG 59.820 61.111 0.00 0.00 45.36 4.01
41 42 3.736100 CGCCCTCGCACAATGCAA 61.736 61.111 0.00 0.00 45.36 4.08
43 44 4.465512 CACGCCCTCGCACAATGC 62.466 66.667 0.00 0.00 40.69 3.56
44 45 2.741985 TCACGCCCTCGCACAATG 60.742 61.111 0.00 0.00 39.84 2.82
45 46 2.434884 CTCACGCCCTCGCACAAT 60.435 61.111 0.00 0.00 39.84 2.71
46 47 4.680237 CCTCACGCCCTCGCACAA 62.680 66.667 0.00 0.00 39.84 3.33
48 49 4.803426 CTCCTCACGCCCTCGCAC 62.803 72.222 0.00 0.00 39.84 5.34
50 51 1.735376 TAATCTCCTCACGCCCTCGC 61.735 60.000 0.00 0.00 39.84 5.03
51 52 0.030908 GTAATCTCCTCACGCCCTCG 59.969 60.000 0.00 0.00 42.43 4.63
52 53 0.030908 CGTAATCTCCTCACGCCCTC 59.969 60.000 0.00 0.00 0.00 4.30
53 54 1.392710 CCGTAATCTCCTCACGCCCT 61.393 60.000 0.00 0.00 34.42 5.19
54 55 1.067582 CCGTAATCTCCTCACGCCC 59.932 63.158 0.00 0.00 34.42 6.13
55 56 0.527817 CACCGTAATCTCCTCACGCC 60.528 60.000 0.00 0.00 34.42 5.68
56 57 0.454600 TCACCGTAATCTCCTCACGC 59.545 55.000 0.00 0.00 34.42 5.34
57 58 1.202268 GGTCACCGTAATCTCCTCACG 60.202 57.143 0.00 0.00 35.50 4.35
58 59 1.136500 GGGTCACCGTAATCTCCTCAC 59.864 57.143 0.00 0.00 0.00 3.51
59 60 1.006758 AGGGTCACCGTAATCTCCTCA 59.993 52.381 0.00 0.00 43.47 3.86
60 61 1.777941 AGGGTCACCGTAATCTCCTC 58.222 55.000 0.00 0.00 43.47 3.71
61 62 2.244252 ACTAGGGTCACCGTAATCTCCT 59.756 50.000 0.00 0.00 43.47 3.69
62 63 2.361438 CACTAGGGTCACCGTAATCTCC 59.639 54.545 0.00 0.00 43.47 3.71
63 64 3.022406 ACACTAGGGTCACCGTAATCTC 58.978 50.000 0.00 0.00 43.47 2.75
64 65 3.022406 GACACTAGGGTCACCGTAATCT 58.978 50.000 20.52 0.00 43.47 2.40
65 66 3.022406 AGACACTAGGGTCACCGTAATC 58.978 50.000 26.59 0.00 43.47 1.75
66 67 3.097342 AGACACTAGGGTCACCGTAAT 57.903 47.619 26.59 1.15 43.47 1.89
67 68 2.592102 AGACACTAGGGTCACCGTAA 57.408 50.000 26.59 0.00 43.47 3.18
68 69 2.040813 AGAAGACACTAGGGTCACCGTA 59.959 50.000 26.59 0.00 43.47 4.02
69 70 1.203025 AGAAGACACTAGGGTCACCGT 60.203 52.381 26.59 8.97 43.47 4.83
70 71 1.546961 AGAAGACACTAGGGTCACCG 58.453 55.000 26.59 0.00 43.47 4.94
71 72 2.028020 CCAAGAAGACACTAGGGTCACC 60.028 54.545 26.59 16.75 40.29 4.02
72 73 2.028020 CCCAAGAAGACACTAGGGTCAC 60.028 54.545 26.59 18.79 40.29 3.67
73 74 2.257207 CCCAAGAAGACACTAGGGTCA 58.743 52.381 26.59 0.00 40.29 4.02
74 75 1.555533 CCCCAAGAAGACACTAGGGTC 59.444 57.143 17.85 17.85 38.08 4.46
75 76 1.151413 TCCCCAAGAAGACACTAGGGT 59.849 52.381 0.00 0.00 35.98 4.34
76 77 1.834263 CTCCCCAAGAAGACACTAGGG 59.166 57.143 0.00 0.00 35.90 3.53
77 78 1.208293 GCTCCCCAAGAAGACACTAGG 59.792 57.143 0.00 0.00 0.00 3.02
78 79 1.902508 TGCTCCCCAAGAAGACACTAG 59.097 52.381 0.00 0.00 0.00 2.57
79 80 2.024176 TGCTCCCCAAGAAGACACTA 57.976 50.000 0.00 0.00 0.00 2.74
80 81 1.366319 ATGCTCCCCAAGAAGACACT 58.634 50.000 0.00 0.00 0.00 3.55
81 82 1.815003 CAATGCTCCCCAAGAAGACAC 59.185 52.381 0.00 0.00 0.00 3.67
82 83 1.425066 ACAATGCTCCCCAAGAAGACA 59.575 47.619 0.00 0.00 0.00 3.41
83 84 1.815003 CACAATGCTCCCCAAGAAGAC 59.185 52.381 0.00 0.00 0.00 3.01
84 85 1.887956 GCACAATGCTCCCCAAGAAGA 60.888 52.381 0.00 0.00 40.96 2.87
85 86 0.529378 GCACAATGCTCCCCAAGAAG 59.471 55.000 0.00 0.00 40.96 2.85
86 87 0.899717 GGCACAATGCTCCCCAAGAA 60.900 55.000 0.13 0.00 44.28 2.52
87 88 1.304381 GGCACAATGCTCCCCAAGA 60.304 57.895 0.13 0.00 44.28 3.02
88 89 1.304713 AGGCACAATGCTCCCCAAG 60.305 57.895 0.13 0.00 44.28 3.61
89 90 1.304381 GAGGCACAATGCTCCCCAA 60.304 57.895 0.13 0.00 44.28 4.12
90 91 2.356278 GAGGCACAATGCTCCCCA 59.644 61.111 0.13 0.00 44.28 4.96
91 92 2.440980 GGAGGCACAATGCTCCCC 60.441 66.667 0.13 0.00 44.28 4.81
92 93 2.048603 GTGGAGGCACAATGCTCCC 61.049 63.158 13.32 9.63 44.28 4.30
93 94 1.303561 TGTGGAGGCACAATGCTCC 60.304 57.895 0.13 6.56 44.28 4.70
94 95 1.589716 GGTGTGGAGGCACAATGCTC 61.590 60.000 0.13 0.00 44.28 4.26
95 96 1.604593 GGTGTGGAGGCACAATGCT 60.605 57.895 0.13 0.00 44.28 3.79
96 97 2.964978 GGTGTGGAGGCACAATGC 59.035 61.111 0.00 0.00 44.08 3.56
97 98 2.981560 GCGGTGTGGAGGCACAATG 61.982 63.158 0.00 0.00 40.89 2.82
98 99 2.672996 GCGGTGTGGAGGCACAAT 60.673 61.111 0.00 0.00 40.89 2.71
99 100 3.825160 GAGCGGTGTGGAGGCACAA 62.825 63.158 0.00 0.00 40.89 3.33
100 101 4.314440 GAGCGGTGTGGAGGCACA 62.314 66.667 0.00 0.00 40.89 4.57
103 104 3.842925 TTTGGAGCGGTGTGGAGGC 62.843 63.158 0.00 0.00 0.00 4.70
104 105 1.966451 GTTTGGAGCGGTGTGGAGG 60.966 63.158 0.00 0.00 0.00 4.30
105 106 2.317609 CGTTTGGAGCGGTGTGGAG 61.318 63.158 0.00 0.00 0.00 3.86
106 107 2.280524 CGTTTGGAGCGGTGTGGA 60.281 61.111 0.00 0.00 0.00 4.02
107 108 3.353836 CCGTTTGGAGCGGTGTGG 61.354 66.667 0.00 0.00 43.84 4.17
116 117 3.194005 GGATGCTAATCTCCGTTTGGA 57.806 47.619 0.00 0.00 43.88 3.53
123 124 1.517242 CCTTGCGGATGCTAATCTCC 58.483 55.000 0.00 0.00 43.34 3.71
124 125 1.202698 ACCCTTGCGGATGCTAATCTC 60.203 52.381 0.00 0.00 43.34 2.75
125 126 0.839946 ACCCTTGCGGATGCTAATCT 59.160 50.000 0.00 0.00 43.34 2.40
126 127 0.947244 CACCCTTGCGGATGCTAATC 59.053 55.000 0.00 0.00 43.34 1.75
127 128 0.255890 ACACCCTTGCGGATGCTAAT 59.744 50.000 0.00 0.00 43.34 1.73
128 129 0.676466 CACACCCTTGCGGATGCTAA 60.676 55.000 0.00 0.00 43.34 3.09
129 130 1.078497 CACACCCTTGCGGATGCTA 60.078 57.895 0.00 0.00 43.34 3.49
130 131 2.360350 CACACCCTTGCGGATGCT 60.360 61.111 0.00 0.00 43.34 3.79
131 132 1.971167 TTCACACCCTTGCGGATGC 60.971 57.895 0.00 0.00 43.20 3.91
132 133 0.606401 AGTTCACACCCTTGCGGATG 60.606 55.000 0.00 0.00 34.64 3.51
133 134 0.110486 AAGTTCACACCCTTGCGGAT 59.890 50.000 0.00 0.00 34.64 4.18
134 135 0.534203 GAAGTTCACACCCTTGCGGA 60.534 55.000 0.00 0.00 34.64 5.54
135 136 1.841663 CGAAGTTCACACCCTTGCGG 61.842 60.000 3.32 0.00 37.81 5.69
136 137 1.569493 CGAAGTTCACACCCTTGCG 59.431 57.895 3.32 0.00 0.00 4.85
137 138 1.515521 CCCGAAGTTCACACCCTTGC 61.516 60.000 3.32 0.00 0.00 4.01
138 139 0.107831 TCCCGAAGTTCACACCCTTG 59.892 55.000 3.32 0.00 0.00 3.61
139 140 1.064825 ATCCCGAAGTTCACACCCTT 58.935 50.000 3.32 0.00 0.00 3.95
140 141 1.553704 GTATCCCGAAGTTCACACCCT 59.446 52.381 3.32 0.00 0.00 4.34
141 142 1.276989 TGTATCCCGAAGTTCACACCC 59.723 52.381 3.32 0.00 0.00 4.61
142 143 2.754946 TGTATCCCGAAGTTCACACC 57.245 50.000 3.32 0.00 0.00 4.16
143 144 2.858344 CGATGTATCCCGAAGTTCACAC 59.142 50.000 3.32 0.00 0.00 3.82
144 145 2.494471 ACGATGTATCCCGAAGTTCACA 59.506 45.455 3.32 0.00 0.00 3.58
145 146 3.114065 GACGATGTATCCCGAAGTTCAC 58.886 50.000 3.32 0.00 0.00 3.18
146 147 2.223409 CGACGATGTATCCCGAAGTTCA 60.223 50.000 3.32 0.00 0.00 3.18
147 148 2.223433 ACGACGATGTATCCCGAAGTTC 60.223 50.000 0.00 0.00 0.00 3.01
148 149 1.747355 ACGACGATGTATCCCGAAGTT 59.253 47.619 0.00 0.00 0.00 2.66
149 150 1.332997 GACGACGATGTATCCCGAAGT 59.667 52.381 0.00 0.00 0.00 3.01
150 151 1.602851 AGACGACGATGTATCCCGAAG 59.397 52.381 0.00 0.00 0.00 3.79
151 152 1.671979 AGACGACGATGTATCCCGAA 58.328 50.000 0.00 0.00 0.00 4.30
152 153 1.600957 GAAGACGACGATGTATCCCGA 59.399 52.381 0.00 0.00 0.00 5.14
153 154 1.659491 CGAAGACGACGATGTATCCCG 60.659 57.143 0.00 0.00 42.66 5.14
154 155 1.925068 GCGAAGACGACGATGTATCCC 60.925 57.143 0.00 0.00 42.66 3.85
155 156 1.396644 GCGAAGACGACGATGTATCC 58.603 55.000 0.00 0.00 42.66 2.59
156 157 1.035772 CGCGAAGACGACGATGTATC 58.964 55.000 0.00 0.00 42.66 2.24
157 158 0.376152 ACGCGAAGACGACGATGTAT 59.624 50.000 15.93 0.00 42.66 2.29
158 159 0.519792 CACGCGAAGACGACGATGTA 60.520 55.000 15.93 0.00 42.66 2.29
159 160 1.796355 CACGCGAAGACGACGATGT 60.796 57.895 15.93 0.00 42.66 3.06
160 161 2.979808 CACGCGAAGACGACGATG 59.020 61.111 15.93 0.00 42.66 3.84
161 162 2.874780 GCACGCGAAGACGACGAT 60.875 61.111 15.93 0.00 42.66 3.73
164 165 3.173240 GAGGCACGCGAAGACGAC 61.173 66.667 15.93 3.40 42.66 4.34
173 174 0.179108 AAGAGATAACCGAGGCACGC 60.179 55.000 0.00 0.00 41.07 5.34
174 175 2.543238 GGTAAGAGATAACCGAGGCACG 60.543 54.545 0.00 0.00 42.18 5.34
175 176 2.223994 GGGTAAGAGATAACCGAGGCAC 60.224 54.545 0.00 0.00 36.57 5.01
176 177 2.037144 GGGTAAGAGATAACCGAGGCA 58.963 52.381 0.00 0.00 36.57 4.75
177 178 2.816204 GGGTAAGAGATAACCGAGGC 57.184 55.000 0.00 0.00 36.57 4.70
182 183 5.595257 AAGAGTTCGGGTAAGAGATAACC 57.405 43.478 0.00 0.00 38.09 2.85
183 184 7.770201 AGTAAAGAGTTCGGGTAAGAGATAAC 58.230 38.462 0.00 0.00 0.00 1.89
184 185 7.951347 AGTAAAGAGTTCGGGTAAGAGATAA 57.049 36.000 0.00 0.00 0.00 1.75
185 186 7.951347 AAGTAAAGAGTTCGGGTAAGAGATA 57.049 36.000 0.00 0.00 0.00 1.98
186 187 6.854091 AAGTAAAGAGTTCGGGTAAGAGAT 57.146 37.500 0.00 0.00 0.00 2.75
187 188 7.630082 GCATAAGTAAAGAGTTCGGGTAAGAGA 60.630 40.741 0.00 0.00 0.00 3.10
188 189 6.476053 GCATAAGTAAAGAGTTCGGGTAAGAG 59.524 42.308 0.00 0.00 0.00 2.85
189 190 6.071221 TGCATAAGTAAAGAGTTCGGGTAAGA 60.071 38.462 0.00 0.00 0.00 2.10
190 191 6.035758 GTGCATAAGTAAAGAGTTCGGGTAAG 59.964 42.308 0.00 0.00 0.00 2.34
191 192 5.870978 GTGCATAAGTAAAGAGTTCGGGTAA 59.129 40.000 0.00 0.00 0.00 2.85
192 193 5.186409 AGTGCATAAGTAAAGAGTTCGGGTA 59.814 40.000 0.00 0.00 0.00 3.69
193 194 4.020485 AGTGCATAAGTAAAGAGTTCGGGT 60.020 41.667 0.00 0.00 0.00 5.28
194 195 4.504858 AGTGCATAAGTAAAGAGTTCGGG 58.495 43.478 0.00 0.00 0.00 5.14
195 196 6.481954 AAAGTGCATAAGTAAAGAGTTCGG 57.518 37.500 0.00 0.00 0.00 4.30
196 197 8.240883 AGTAAAGTGCATAAGTAAAGAGTTCG 57.759 34.615 0.00 0.00 0.00 3.95
199 200 9.338622 ACAAAGTAAAGTGCATAAGTAAAGAGT 57.661 29.630 0.00 0.00 0.00 3.24
200 201 9.599322 CACAAAGTAAAGTGCATAAGTAAAGAG 57.401 33.333 0.00 0.00 0.00 2.85
201 202 9.332502 TCACAAAGTAAAGTGCATAAGTAAAGA 57.667 29.630 0.00 0.00 35.76 2.52
205 206 8.879759 GCTATCACAAAGTAAAGTGCATAAGTA 58.120 33.333 0.00 0.00 35.76 2.24
206 207 7.148239 GGCTATCACAAAGTAAAGTGCATAAGT 60.148 37.037 0.00 0.00 35.76 2.24
207 208 7.148255 TGGCTATCACAAAGTAAAGTGCATAAG 60.148 37.037 0.00 0.00 35.76 1.73
208 209 6.657117 TGGCTATCACAAAGTAAAGTGCATAA 59.343 34.615 0.00 0.00 35.76 1.90
209 210 6.176896 TGGCTATCACAAAGTAAAGTGCATA 58.823 36.000 0.00 0.00 35.76 3.14
210 211 5.009631 TGGCTATCACAAAGTAAAGTGCAT 58.990 37.500 0.00 0.00 35.76 3.96
211 212 4.393834 TGGCTATCACAAAGTAAAGTGCA 58.606 39.130 0.00 0.00 35.76 4.57
212 213 5.567138 ATGGCTATCACAAAGTAAAGTGC 57.433 39.130 0.00 0.00 35.76 4.40
213 214 8.677300 ACAATATGGCTATCACAAAGTAAAGTG 58.323 33.333 0.00 0.00 37.10 3.16
214 215 8.807948 ACAATATGGCTATCACAAAGTAAAGT 57.192 30.769 0.00 0.00 0.00 2.66
217 218 9.461312 AGAAACAATATGGCTATCACAAAGTAA 57.539 29.630 0.00 0.00 0.00 2.24
218 219 9.461312 AAGAAACAATATGGCTATCACAAAGTA 57.539 29.630 0.00 0.00 0.00 2.24
219 220 7.944729 AGAAACAATATGGCTATCACAAAGT 57.055 32.000 0.00 0.00 0.00 2.66
220 221 8.246180 ACAAGAAACAATATGGCTATCACAAAG 58.754 33.333 0.00 0.00 0.00 2.77
221 222 8.121305 ACAAGAAACAATATGGCTATCACAAA 57.879 30.769 0.00 0.00 0.00 2.83
222 223 7.392953 TGACAAGAAACAATATGGCTATCACAA 59.607 33.333 0.00 0.00 0.00 3.33
223 224 6.883756 TGACAAGAAACAATATGGCTATCACA 59.116 34.615 0.00 0.00 0.00 3.58
224 225 7.320443 TGACAAGAAACAATATGGCTATCAC 57.680 36.000 0.00 0.00 0.00 3.06
225 226 9.797642 ATATGACAAGAAACAATATGGCTATCA 57.202 29.630 0.00 0.00 0.00 2.15
258 259 8.774890 AATCAAGATAAGCAGCTATGTGATAG 57.225 34.615 0.00 0.00 35.94 2.08
259 260 9.866798 CTAATCAAGATAAGCAGCTATGTGATA 57.133 33.333 0.00 0.00 0.00 2.15
260 261 7.333921 GCTAATCAAGATAAGCAGCTATGTGAT 59.666 37.037 0.00 0.00 35.05 3.06
261 262 6.648310 GCTAATCAAGATAAGCAGCTATGTGA 59.352 38.462 0.00 0.00 35.05 3.58
262 263 6.426025 TGCTAATCAAGATAAGCAGCTATGTG 59.574 38.462 0.00 0.00 39.92 3.21
263 264 6.528321 TGCTAATCAAGATAAGCAGCTATGT 58.472 36.000 0.00 0.00 39.92 2.29
271 272 9.443283 CAACAACTTATGCTAATCAAGATAAGC 57.557 33.333 0.00 0.00 33.32 3.09
272 273 9.941664 CCAACAACTTATGCTAATCAAGATAAG 57.058 33.333 0.00 0.00 34.66 1.73
273 274 9.461312 ACCAACAACTTATGCTAATCAAGATAA 57.539 29.630 0.00 0.00 0.00 1.75
274 275 8.892723 CACCAACAACTTATGCTAATCAAGATA 58.107 33.333 0.00 0.00 0.00 1.98
275 276 7.629222 GCACCAACAACTTATGCTAATCAAGAT 60.629 37.037 0.00 0.00 33.44 2.40
276 277 6.349280 GCACCAACAACTTATGCTAATCAAGA 60.349 38.462 0.00 0.00 33.44 3.02
277 278 5.801947 GCACCAACAACTTATGCTAATCAAG 59.198 40.000 0.00 0.00 33.44 3.02
278 279 5.242615 TGCACCAACAACTTATGCTAATCAA 59.757 36.000 0.00 0.00 37.20 2.57
279 280 4.764308 TGCACCAACAACTTATGCTAATCA 59.236 37.500 0.00 0.00 37.20 2.57
280 281 5.095490 GTGCACCAACAACTTATGCTAATC 58.905 41.667 5.22 0.00 37.20 1.75
281 282 4.522405 TGTGCACCAACAACTTATGCTAAT 59.478 37.500 15.69 0.00 37.20 1.73
282 283 3.885901 TGTGCACCAACAACTTATGCTAA 59.114 39.130 15.69 0.00 37.20 3.09
283 284 3.481453 TGTGCACCAACAACTTATGCTA 58.519 40.909 15.69 0.00 37.20 3.49
284 285 2.305928 TGTGCACCAACAACTTATGCT 58.694 42.857 15.69 0.00 37.20 3.79
285 286 2.791383 TGTGCACCAACAACTTATGC 57.209 45.000 15.69 0.00 36.81 3.14
286 287 4.458989 ACCTATGTGCACCAACAACTTATG 59.541 41.667 15.69 0.00 32.81 1.90
287 288 4.458989 CACCTATGTGCACCAACAACTTAT 59.541 41.667 15.69 0.00 35.31 1.73
288 289 3.818210 CACCTATGTGCACCAACAACTTA 59.182 43.478 15.69 0.00 35.31 2.24
289 290 2.622942 CACCTATGTGCACCAACAACTT 59.377 45.455 15.69 0.00 35.31 2.66
290 291 2.158682 TCACCTATGTGCACCAACAACT 60.159 45.455 15.69 0.00 42.46 3.16
291 292 2.226330 TCACCTATGTGCACCAACAAC 58.774 47.619 15.69 0.00 42.46 3.32
292 293 2.503331 CTCACCTATGTGCACCAACAA 58.497 47.619 15.69 0.00 42.46 2.83
293 294 1.881925 GCTCACCTATGTGCACCAACA 60.882 52.381 15.69 0.00 43.41 3.33
294 295 0.804989 GCTCACCTATGTGCACCAAC 59.195 55.000 15.69 0.00 43.41 3.77
295 296 0.322456 GGCTCACCTATGTGCACCAA 60.322 55.000 15.69 0.65 45.29 3.67
296 297 1.299648 GGCTCACCTATGTGCACCA 59.700 57.895 15.69 2.61 45.29 4.17
297 298 4.225497 GGCTCACCTATGTGCACC 57.775 61.111 15.69 0.00 45.29 5.01
307 308 4.017177 ACCTAAAACAACTAGGCTCACC 57.983 45.455 0.00 0.00 39.78 4.02
308 309 6.183360 ACAAAACCTAAAACAACTAGGCTCAC 60.183 38.462 0.00 0.00 39.78 3.51
309 310 5.889289 ACAAAACCTAAAACAACTAGGCTCA 59.111 36.000 0.00 0.00 39.78 4.26
310 311 6.206498 CACAAAACCTAAAACAACTAGGCTC 58.794 40.000 0.00 0.00 39.78 4.70
311 312 5.451381 GCACAAAACCTAAAACAACTAGGCT 60.451 40.000 0.00 0.00 39.78 4.58
312 313 4.743151 GCACAAAACCTAAAACAACTAGGC 59.257 41.667 0.00 0.00 39.78 3.93
313 314 6.144078 AGCACAAAACCTAAAACAACTAGG 57.856 37.500 0.00 0.00 41.61 3.02
314 315 7.220108 GTCAAGCACAAAACCTAAAACAACTAG 59.780 37.037 0.00 0.00 0.00 2.57
315 316 7.030768 GTCAAGCACAAAACCTAAAACAACTA 58.969 34.615 0.00 0.00 0.00 2.24
316 317 5.867174 GTCAAGCACAAAACCTAAAACAACT 59.133 36.000 0.00 0.00 0.00 3.16
317 318 5.635700 TGTCAAGCACAAAACCTAAAACAAC 59.364 36.000 0.00 0.00 29.30 3.32
318 319 5.784177 TGTCAAGCACAAAACCTAAAACAA 58.216 33.333 0.00 0.00 29.30 2.83
319 320 5.392767 TGTCAAGCACAAAACCTAAAACA 57.607 34.783 0.00 0.00 29.30 2.83
330 331 3.067461 AGCGGTTAATTTGTCAAGCACAA 59.933 39.130 0.00 0.00 43.68 3.33
331 332 2.621055 AGCGGTTAATTTGTCAAGCACA 59.379 40.909 0.00 0.00 0.00 4.57
332 333 3.282831 AGCGGTTAATTTGTCAAGCAC 57.717 42.857 0.00 0.00 0.00 4.40
333 334 3.438781 CCTAGCGGTTAATTTGTCAAGCA 59.561 43.478 0.00 0.00 0.00 3.91
334 335 3.439129 ACCTAGCGGTTAATTTGTCAAGC 59.561 43.478 0.00 0.00 42.13 4.01
348 349 1.878953 ATGCGGAATAAACCTAGCGG 58.121 50.000 0.00 0.00 0.00 5.52
349 350 3.064820 ACAAATGCGGAATAAACCTAGCG 59.935 43.478 0.00 0.00 0.00 4.26
350 351 4.632538 ACAAATGCGGAATAAACCTAGC 57.367 40.909 0.00 0.00 0.00 3.42
351 352 7.220108 GCTTAAACAAATGCGGAATAAACCTAG 59.780 37.037 0.00 0.00 0.00 3.02
352 353 7.030768 GCTTAAACAAATGCGGAATAAACCTA 58.969 34.615 0.00 0.00 0.00 3.08
353 354 5.867174 GCTTAAACAAATGCGGAATAAACCT 59.133 36.000 0.00 0.00 0.00 3.50
354 355 5.062934 GGCTTAAACAAATGCGGAATAAACC 59.937 40.000 0.00 0.00 0.00 3.27
355 356 5.867174 AGGCTTAAACAAATGCGGAATAAAC 59.133 36.000 0.00 0.00 0.00 2.01
356 357 6.031751 AGGCTTAAACAAATGCGGAATAAA 57.968 33.333 0.00 0.00 0.00 1.40
357 358 5.652994 AGGCTTAAACAAATGCGGAATAA 57.347 34.783 0.00 0.00 0.00 1.40
358 359 6.761099 TTAGGCTTAAACAAATGCGGAATA 57.239 33.333 0.00 0.00 0.00 1.75
359 360 5.652994 TTAGGCTTAAACAAATGCGGAAT 57.347 34.783 0.00 0.00 0.00 3.01
360 361 5.455056 TTTAGGCTTAAACAAATGCGGAA 57.545 34.783 0.00 0.00 0.00 4.30
361 362 5.646606 GATTTAGGCTTAAACAAATGCGGA 58.353 37.500 2.77 0.00 31.90 5.54
362 363 4.499040 CGATTTAGGCTTAAACAAATGCGG 59.501 41.667 2.77 0.00 31.90 5.69
363 364 5.092781 ACGATTTAGGCTTAAACAAATGCG 58.907 37.500 2.77 4.18 31.90 4.73
364 365 8.628882 ATTACGATTTAGGCTTAAACAAATGC 57.371 30.769 2.77 0.00 31.90 3.56
387 388 7.982919 GGGGTGAATAGGCGTTTTAAAATAATT 59.017 33.333 3.52 0.88 0.00 1.40
388 389 7.418139 GGGGGTGAATAGGCGTTTTAAAATAAT 60.418 37.037 3.52 0.00 0.00 1.28
389 390 6.127394 GGGGGTGAATAGGCGTTTTAAAATAA 60.127 38.462 3.52 0.00 0.00 1.40
390 391 5.360429 GGGGGTGAATAGGCGTTTTAAAATA 59.640 40.000 3.52 0.00 0.00 1.40
391 392 4.160814 GGGGGTGAATAGGCGTTTTAAAAT 59.839 41.667 3.52 0.00 0.00 1.82
392 393 3.510753 GGGGGTGAATAGGCGTTTTAAAA 59.489 43.478 0.00 0.00 0.00 1.52
393 394 3.090790 GGGGGTGAATAGGCGTTTTAAA 58.909 45.455 0.00 0.00 0.00 1.52
394 395 2.725637 GGGGGTGAATAGGCGTTTTAA 58.274 47.619 0.00 0.00 0.00 1.52
395 396 2.423446 GGGGGTGAATAGGCGTTTTA 57.577 50.000 0.00 0.00 0.00 1.52
396 397 3.276281 GGGGGTGAATAGGCGTTTT 57.724 52.632 0.00 0.00 0.00 2.43
412 413 2.210711 GGATGTCGCCTAGAGGGGG 61.211 68.421 12.32 0.23 46.90 5.40
414 415 1.742768 GTGGATGTCGCCTAGAGGG 59.257 63.158 0.00 0.00 35.18 4.30
415 416 1.101635 TCGTGGATGTCGCCTAGAGG 61.102 60.000 0.00 0.00 38.53 3.69
416 417 0.955178 ATCGTGGATGTCGCCTAGAG 59.045 55.000 0.00 0.00 0.00 2.43
417 418 0.952280 GATCGTGGATGTCGCCTAGA 59.048 55.000 0.00 0.00 0.00 2.43
418 419 0.955178 AGATCGTGGATGTCGCCTAG 59.045 55.000 0.00 0.00 0.00 3.02
419 420 1.399714 AAGATCGTGGATGTCGCCTA 58.600 50.000 0.00 0.00 0.00 3.93
420 421 0.537188 AAAGATCGTGGATGTCGCCT 59.463 50.000 0.00 0.00 0.00 5.52
421 422 0.931005 GAAAGATCGTGGATGTCGCC 59.069 55.000 0.00 0.00 0.00 5.54
422 423 1.324736 GTGAAAGATCGTGGATGTCGC 59.675 52.381 0.00 0.00 0.00 5.19
423 424 2.606108 TGTGAAAGATCGTGGATGTCG 58.394 47.619 0.00 0.00 0.00 4.35
424 425 4.201851 CCATTGTGAAAGATCGTGGATGTC 60.202 45.833 0.00 0.00 0.00 3.06
425 426 3.691118 CCATTGTGAAAGATCGTGGATGT 59.309 43.478 0.00 0.00 0.00 3.06
426 427 3.488047 GCCATTGTGAAAGATCGTGGATG 60.488 47.826 0.00 0.00 0.00 3.51
427 428 2.684881 GCCATTGTGAAAGATCGTGGAT 59.315 45.455 0.00 0.00 0.00 3.41
428 429 2.083774 GCCATTGTGAAAGATCGTGGA 58.916 47.619 0.00 0.00 0.00 4.02
429 430 1.811965 TGCCATTGTGAAAGATCGTGG 59.188 47.619 0.00 0.00 0.00 4.94
430 431 3.557577 TTGCCATTGTGAAAGATCGTG 57.442 42.857 0.00 0.00 0.00 4.35
431 432 4.549458 CTTTTGCCATTGTGAAAGATCGT 58.451 39.130 0.00 0.00 32.29 3.73
432 433 3.365820 GCTTTTGCCATTGTGAAAGATCG 59.634 43.478 0.00 0.00 40.15 3.69
433 434 4.309099 TGCTTTTGCCATTGTGAAAGATC 58.691 39.130 0.00 0.00 46.87 2.75
434 435 4.312443 CTGCTTTTGCCATTGTGAAAGAT 58.688 39.130 0.00 0.00 46.87 2.40
435 436 3.719924 CTGCTTTTGCCATTGTGAAAGA 58.280 40.909 0.00 0.00 46.87 2.52
436 437 2.222445 GCTGCTTTTGCCATTGTGAAAG 59.778 45.455 0.00 0.00 46.87 2.62
437 438 2.211806 GCTGCTTTTGCCATTGTGAAA 58.788 42.857 0.00 0.00 46.87 2.69
438 439 1.138464 TGCTGCTTTTGCCATTGTGAA 59.862 42.857 0.00 0.00 46.87 3.18
439 440 0.751452 TGCTGCTTTTGCCATTGTGA 59.249 45.000 0.00 0.00 46.87 3.58
440 441 1.262151 GTTGCTGCTTTTGCCATTGTG 59.738 47.619 0.00 0.00 46.87 3.33
459 460 5.496556 TGCTGCTATTATTGTAGTTGGTGT 58.503 37.500 0.00 0.00 0.00 4.16
467 468 6.320926 TCTTTGCCATTGCTGCTATTATTGTA 59.679 34.615 0.00 0.00 38.71 2.41
472 473 6.716173 TCATATCTTTGCCATTGCTGCTATTA 59.284 34.615 0.00 0.00 38.71 0.98
476 477 3.293337 TCATATCTTTGCCATTGCTGCT 58.707 40.909 0.00 0.00 38.71 4.24
484 485 2.642427 ACGTGCATCATATCTTTGCCA 58.358 42.857 0.00 0.00 35.51 4.92
493 494 1.537348 GGAAGCCGTACGTGCATCATA 60.537 52.381 24.59 0.00 0.00 2.15
494 495 0.810031 GGAAGCCGTACGTGCATCAT 60.810 55.000 24.59 12.78 0.00 2.45
510 511 4.873827 GGATTTGTGCTTAGTCATACGGAA 59.126 41.667 0.00 0.00 0.00 4.30
535 536 4.000325 TGCACGTTAAACATGTAGCTCAT 59.000 39.130 0.00 0.00 37.22 2.90
536 537 3.394719 TGCACGTTAAACATGTAGCTCA 58.605 40.909 0.00 0.00 0.00 4.26
537 538 4.148891 GTTGCACGTTAAACATGTAGCTC 58.851 43.478 0.00 0.00 0.00 4.09
538 539 3.562141 TGTTGCACGTTAAACATGTAGCT 59.438 39.130 0.00 0.00 31.52 3.32
540 541 5.337219 TCTGTTGCACGTTAAACATGTAG 57.663 39.130 11.99 3.07 35.82 2.74
541 542 5.467063 TCATCTGTTGCACGTTAAACATGTA 59.533 36.000 11.99 3.82 35.82 2.29
543 544 4.782156 TCATCTGTTGCACGTTAAACATG 58.218 39.130 11.99 9.32 35.82 3.21
544 545 5.412594 AGATCATCTGTTGCACGTTAAACAT 59.587 36.000 11.99 0.00 35.82 2.71
546 547 5.283060 AGATCATCTGTTGCACGTTAAAC 57.717 39.130 0.00 3.64 0.00 2.01
547 548 5.580691 CCTAGATCATCTGTTGCACGTTAAA 59.419 40.000 0.00 0.00 0.00 1.52
669 673 6.237490 GGACAATCTACAGTACGTTTTCATCG 60.237 42.308 0.00 0.00 0.00 3.84
679 683 5.422650 AGAAAGGAGGGACAATCTACAGTAC 59.577 44.000 0.00 0.00 0.00 2.73
680 684 5.590818 AGAAAGGAGGGACAATCTACAGTA 58.409 41.667 0.00 0.00 0.00 2.74
681 685 4.430441 AGAAAGGAGGGACAATCTACAGT 58.570 43.478 0.00 0.00 0.00 3.55
682 686 5.188751 AGAAGAAAGGAGGGACAATCTACAG 59.811 44.000 0.00 0.00 0.00 2.74
683 687 5.094387 AGAAGAAAGGAGGGACAATCTACA 58.906 41.667 0.00 0.00 0.00 2.74
684 688 5.685520 AGAAGAAAGGAGGGACAATCTAC 57.314 43.478 0.00 0.00 0.00 2.59
685 689 6.704056 AAAGAAGAAAGGAGGGACAATCTA 57.296 37.500 0.00 0.00 0.00 1.98
686 690 5.590976 AAAGAAGAAAGGAGGGACAATCT 57.409 39.130 0.00 0.00 0.00 2.40
687 691 6.656632 AAAAAGAAGAAAGGAGGGACAATC 57.343 37.500 0.00 0.00 0.00 2.67
765 1103 4.761739 TGTACTACTAGCCTACACGTGTTT 59.238 41.667 28.55 12.64 0.00 2.83
947 2578 1.067821 AGCTAGCTAGTTGATGGACGC 59.932 52.381 17.69 4.48 0.00 5.19
950 2581 6.381420 ACTCTTTTAGCTAGCTAGTTGATGGA 59.619 38.462 23.03 14.09 0.00 3.41
969 2610 8.499162 CAATCTTGTTGTCGATTTCTACTCTTT 58.501 33.333 0.00 0.00 0.00 2.52
1039 2743 0.559205 ATGGATGATGTGGCCACCAT 59.441 50.000 32.62 27.29 35.28 3.55
1075 2785 5.246656 AGGCATCATCCTTCTCTAGATCTTG 59.753 44.000 0.00 0.00 30.82 3.02
1125 2835 4.135153 TCCTCGCCGCAGAGCTTC 62.135 66.667 6.69 0.00 36.95 3.86
1345 3058 2.098934 TGCAGTGTTCGTCAGCAAATTT 59.901 40.909 0.00 0.00 31.42 1.82
1355 3068 1.796459 GGTCGTTTATGCAGTGTTCGT 59.204 47.619 0.00 0.00 0.00 3.85
1359 3072 2.688507 CTGAGGTCGTTTATGCAGTGT 58.311 47.619 0.00 0.00 0.00 3.55
1368 3081 0.033504 ATGTCACGCTGAGGTCGTTT 59.966 50.000 0.00 0.00 38.19 3.60
1466 3179 0.107165 GGCTTTCTTATCAGCGGGGT 60.107 55.000 0.00 0.00 36.85 4.95
1473 3186 6.434028 AGTTTTGCTGTATGGCTTTCTTATCA 59.566 34.615 0.00 0.00 0.00 2.15
1476 3189 6.446318 CAAGTTTTGCTGTATGGCTTTCTTA 58.554 36.000 0.00 0.00 0.00 2.10
1721 4251 9.565090 TCCCTATCATGTGAATAAAATGAAGAG 57.435 33.333 0.00 0.00 34.21 2.85
1764 4294 0.388134 TCCGACGCAACTCTAACAGC 60.388 55.000 0.00 0.00 0.00 4.40
1777 4307 7.281774 ACCTACCATGTACTATAATATCCGACG 59.718 40.741 0.00 0.00 0.00 5.12
1790 4320 7.130775 AGTCCAACTATAACCTACCATGTACT 58.869 38.462 0.00 0.00 0.00 2.73
1796 4326 6.955851 ACTACAAGTCCAACTATAACCTACCA 59.044 38.462 0.00 0.00 0.00 3.25
1797 4327 7.415592 ACTACAAGTCCAACTATAACCTACC 57.584 40.000 0.00 0.00 0.00 3.18
1829 4360 8.234136 ACACGACTTCATATCCTATCTAAACA 57.766 34.615 0.00 0.00 0.00 2.83
1883 4414 9.250246 TCGTGTGTCTATCCCATCATATATAAA 57.750 33.333 0.00 0.00 0.00 1.40
1894 4425 5.827756 AGGATATATCGTGTGTCTATCCCA 58.172 41.667 7.12 0.00 38.99 4.37
1914 4445 4.314961 CGTGCTATTATGTTGGCATAGGA 58.685 43.478 0.00 0.00 38.64 2.94
1919 4450 1.674359 CCCGTGCTATTATGTTGGCA 58.326 50.000 0.00 0.00 0.00 4.92
1982 4513 1.275291 ACACCGCTACAATACAGCACT 59.725 47.619 0.00 0.00 39.04 4.40
1986 4517 3.780902 TCATGACACCGCTACAATACAG 58.219 45.455 0.00 0.00 0.00 2.74
2000 4531 2.725312 GGCGCTCCTCCTCATGACA 61.725 63.158 7.64 0.00 0.00 3.58
2007 4538 2.563013 TAACTACGGGCGCTCCTCCT 62.563 60.000 7.64 0.00 0.00 3.69
2011 4542 2.416260 CCTAACTACGGGCGCTCC 59.584 66.667 7.64 6.04 0.00 4.70
2020 4551 4.557097 GCTACATCTCCGAAGCCTAACTAC 60.557 50.000 0.00 0.00 0.00 2.73
2030 4561 2.492088 CCGATATGGCTACATCTCCGAA 59.508 50.000 0.00 0.00 38.53 4.30
2031 4562 2.092323 CCGATATGGCTACATCTCCGA 58.908 52.381 0.00 0.00 38.53 4.55
2033 4564 2.826128 TCACCGATATGGCTACATCTCC 59.174 50.000 0.00 0.00 43.94 3.71
2034 4565 4.238514 GTTCACCGATATGGCTACATCTC 58.761 47.826 0.00 0.00 43.94 2.75
2035 4566 3.006967 GGTTCACCGATATGGCTACATCT 59.993 47.826 0.00 0.00 43.94 2.90
2036 4567 3.006967 AGGTTCACCGATATGGCTACATC 59.993 47.826 0.00 0.00 43.94 3.06
2037 4568 2.972713 AGGTTCACCGATATGGCTACAT 59.027 45.455 0.00 0.00 43.94 2.29
2074 4605 3.702555 GCCACACGAGCACGACAC 61.703 66.667 11.40 0.00 42.66 3.67
2091 4622 2.208431 GATCATCCGAAGACCAAGCAG 58.792 52.381 0.00 0.00 0.00 4.24
2101 4632 1.435925 CCACCGTCGATCATCCGAA 59.564 57.895 0.00 0.00 40.51 4.30
2104 4635 2.280186 GGCCACCGTCGATCATCC 60.280 66.667 0.00 0.00 0.00 3.51
2115 4646 4.287766 AGAATATTAATCCGAGGCCACC 57.712 45.455 5.01 0.00 0.00 4.61
2116 4647 6.228258 TGTTAGAATATTAATCCGAGGCCAC 58.772 40.000 5.01 0.00 0.00 5.01
2228 4781 6.379988 GGCCTAAAGGATAGGAATTTTGTTGA 59.620 38.462 5.71 0.00 36.85 3.18
2255 4853 1.716826 CGTCCGACTAGAGCCACCTC 61.717 65.000 0.00 0.00 38.42 3.85
2292 4890 3.815401 CTGTACCAAGTCAAACCTCAAGG 59.185 47.826 0.00 0.00 42.17 3.61
2308 4906 0.394352 CATGGCCAAGGACCTGTACC 60.394 60.000 10.96 0.00 0.00 3.34
2318 4916 1.236628 GCATCTCTAGCATGGCCAAG 58.763 55.000 10.96 6.55 0.00 3.61
2326 4924 2.314323 TTTGATGCGCATCTCTAGCA 57.686 45.000 40.90 24.12 45.46 3.49
2327 4925 3.064545 ACTTTTTGATGCGCATCTCTAGC 59.935 43.478 40.90 21.94 38.60 3.42
2328 4926 4.549680 CGACTTTTTGATGCGCATCTCTAG 60.550 45.833 40.90 32.38 38.60 2.43
2329 4927 3.306973 CGACTTTTTGATGCGCATCTCTA 59.693 43.478 40.90 27.15 38.60 2.43
2330 4928 2.094894 CGACTTTTTGATGCGCATCTCT 59.905 45.455 40.90 21.75 38.60 3.10
2331 4929 2.094258 TCGACTTTTTGATGCGCATCTC 59.906 45.455 40.90 29.89 38.60 2.75
2332 4930 2.076100 TCGACTTTTTGATGCGCATCT 58.924 42.857 40.90 25.79 38.60 2.90
2333 4931 2.169179 GTCGACTTTTTGATGCGCATC 58.831 47.619 37.43 37.43 38.29 3.91
2376 5001 4.960938 AGTGCTCACATAGAGTTTTGACA 58.039 39.130 2.63 0.00 46.47 3.58
2377 5002 5.062809 GCTAGTGCTCACATAGAGTTTTGAC 59.937 44.000 2.63 0.00 46.47 3.18
2420 6977 2.485814 GTGACAGAATGCCTTCAAGGAC 59.514 50.000 7.98 0.00 42.53 3.85
2425 6982 2.104622 TCACAGTGACAGAATGCCTTCA 59.895 45.455 0.00 0.00 42.53 3.02
2427 6984 2.936919 TCACAGTGACAGAATGCCTT 57.063 45.000 0.00 0.00 42.53 4.35
2437 6994 5.068460 AGCTAAGGTCTGATATCACAGTGAC 59.932 44.000 5.05 12.26 38.79 3.67
2438 6995 5.068329 CAGCTAAGGTCTGATATCACAGTGA 59.932 44.000 5.50 5.50 38.79 3.41
2441 6998 4.202192 TGCAGCTAAGGTCTGATATCACAG 60.202 45.833 0.00 0.00 39.02 3.66
2443 7000 4.327982 TGCAGCTAAGGTCTGATATCAC 57.672 45.455 0.00 0.00 33.54 3.06
2473 7034 4.215185 AGCTACTTTTGCAGAAAGAGCTTC 59.785 41.667 23.08 12.75 37.41 3.86
2479 7040 6.892310 AAAACAAGCTACTTTTGCAGAAAG 57.108 33.333 15.42 15.42 0.00 2.62
2502 7063 7.801716 AACACTTGCATCTGTACTAGAAAAA 57.198 32.000 0.00 0.00 39.30 1.94
2503 7064 7.801716 AAACACTTGCATCTGTACTAGAAAA 57.198 32.000 0.00 0.00 39.30 2.29
2511 7072 9.135843 GCGTATATATAAACACTTGCATCTGTA 57.864 33.333 0.00 0.00 0.00 2.74
2512 7073 7.148804 CGCGTATATATAAACACTTGCATCTGT 60.149 37.037 0.00 0.00 0.00 3.41
2513 7074 7.166824 CGCGTATATATAAACACTTGCATCTG 58.833 38.462 0.00 0.00 0.00 2.90
2514 7075 6.183360 GCGCGTATATATAAACACTTGCATCT 60.183 38.462 8.43 0.00 0.00 2.90
2515 7076 5.952064 GCGCGTATATATAAACACTTGCATC 59.048 40.000 8.43 0.00 0.00 3.91
2516 7077 5.407084 TGCGCGTATATATAAACACTTGCAT 59.593 36.000 8.43 0.00 0.00 3.96
2517 7078 4.745620 TGCGCGTATATATAAACACTTGCA 59.254 37.500 8.43 0.00 0.00 4.08
2518 7079 5.258685 TGCGCGTATATATAAACACTTGC 57.741 39.130 8.43 0.00 0.00 4.01
2519 7080 7.944997 TGTATGCGCGTATATATAAACACTTG 58.055 34.615 19.79 0.00 0.00 3.16
2520 7081 8.697846 ATGTATGCGCGTATATATAAACACTT 57.302 30.769 21.34 5.15 0.00 3.16
2521 7082 8.697846 AATGTATGCGCGTATATATAAACACT 57.302 30.769 22.54 5.42 0.00 3.55
2522 7083 8.588789 TGAATGTATGCGCGTATATATAAACAC 58.411 33.333 22.54 10.43 0.00 3.32
2523 7084 8.588789 GTGAATGTATGCGCGTATATATAAACA 58.411 33.333 22.54 16.43 0.00 2.83
2524 7085 8.054236 GGTGAATGTATGCGCGTATATATAAAC 58.946 37.037 22.54 21.08 0.00 2.01
2525 7086 7.223193 GGGTGAATGTATGCGCGTATATATAAA 59.777 37.037 22.54 13.30 0.00 1.40
2526 7087 6.698329 GGGTGAATGTATGCGCGTATATATAA 59.302 38.462 22.54 13.59 0.00 0.98
2527 7088 6.210796 GGGTGAATGTATGCGCGTATATATA 58.789 40.000 22.54 12.39 0.00 0.86
2528 7089 5.047847 GGGTGAATGTATGCGCGTATATAT 58.952 41.667 19.79 18.88 0.00 0.86
2529 7090 4.426416 GGGTGAATGTATGCGCGTATATA 58.574 43.478 19.79 17.42 0.00 0.86
2530 7091 3.259064 GGGTGAATGTATGCGCGTATAT 58.741 45.455 19.79 12.93 0.00 0.86
2531 7092 2.679450 GGGTGAATGTATGCGCGTATA 58.321 47.619 13.13 13.13 0.00 1.47
2532 7093 1.508632 GGGTGAATGTATGCGCGTAT 58.491 50.000 15.52 15.52 0.00 3.06
2533 7094 0.872451 CGGGTGAATGTATGCGCGTA 60.872 55.000 8.43 4.92 33.62 4.42
2534 7095 2.171079 CGGGTGAATGTATGCGCGT 61.171 57.895 8.43 7.55 33.62 6.01
2535 7096 0.872451 TACGGGTGAATGTATGCGCG 60.872 55.000 0.00 0.00 41.82 6.86
2536 7097 1.194547 CATACGGGTGAATGTATGCGC 59.805 52.381 0.00 0.00 40.84 6.09
2537 7098 2.749776 TCATACGGGTGAATGTATGCG 58.250 47.619 7.34 0.00 44.76 4.73
2538 7099 3.874543 TGTTCATACGGGTGAATGTATGC 59.125 43.478 7.80 0.00 44.76 3.14
2539 7100 4.873259 TGTGTTCATACGGGTGAATGTATG 59.127 41.667 7.80 6.12 45.89 2.39
2540 7101 4.873827 GTGTGTTCATACGGGTGAATGTAT 59.126 41.667 7.80 0.00 39.99 2.29
2541 7102 4.247258 GTGTGTTCATACGGGTGAATGTA 58.753 43.478 7.80 0.00 39.99 2.29
2542 7103 3.071479 GTGTGTTCATACGGGTGAATGT 58.929 45.455 7.80 0.00 39.99 2.71
2543 7104 3.070748 TGTGTGTTCATACGGGTGAATG 58.929 45.455 7.80 0.00 39.99 2.67
2544 7105 3.071479 GTGTGTGTTCATACGGGTGAAT 58.929 45.455 7.80 0.00 39.99 2.57
2545 7106 2.158943 TGTGTGTGTTCATACGGGTGAA 60.159 45.455 1.20 1.20 38.28 3.18
2546 7107 1.413077 TGTGTGTGTTCATACGGGTGA 59.587 47.619 0.00 0.00 38.28 4.02
2547 7108 1.529438 GTGTGTGTGTTCATACGGGTG 59.471 52.381 0.00 0.00 38.28 4.61
2548 7109 1.870580 CGTGTGTGTGTTCATACGGGT 60.871 52.381 7.79 0.00 44.69 5.28
2549 7110 0.787787 CGTGTGTGTGTTCATACGGG 59.212 55.000 7.79 0.00 44.69 5.28
2552 7113 4.260212 GGATATGCGTGTGTGTGTTCATAC 60.260 45.833 0.00 0.00 36.46 2.39
2553 7114 3.868661 GGATATGCGTGTGTGTGTTCATA 59.131 43.478 0.00 0.00 0.00 2.15
2554 7115 2.677836 GGATATGCGTGTGTGTGTTCAT 59.322 45.455 0.00 0.00 0.00 2.57
2555 7116 2.073056 GGATATGCGTGTGTGTGTTCA 58.927 47.619 0.00 0.00 0.00 3.18
2556 7117 2.346803 AGGATATGCGTGTGTGTGTTC 58.653 47.619 0.00 0.00 0.00 3.18
2557 7118 2.472695 AGGATATGCGTGTGTGTGTT 57.527 45.000 0.00 0.00 0.00 3.32
2558 7119 2.418197 GGTAGGATATGCGTGTGTGTGT 60.418 50.000 0.00 0.00 0.00 3.72
2559 7120 2.159099 AGGTAGGATATGCGTGTGTGTG 60.159 50.000 0.00 0.00 0.00 3.82
2560 7121 2.100916 GAGGTAGGATATGCGTGTGTGT 59.899 50.000 0.00 0.00 0.00 3.72
2561 7122 2.362397 AGAGGTAGGATATGCGTGTGTG 59.638 50.000 0.00 0.00 0.00 3.82
2562 7123 2.667470 AGAGGTAGGATATGCGTGTGT 58.333 47.619 0.00 0.00 0.00 3.72
2563 7124 4.459337 TCATAGAGGTAGGATATGCGTGTG 59.541 45.833 0.00 0.00 0.00 3.82
2564 7125 4.663334 TCATAGAGGTAGGATATGCGTGT 58.337 43.478 0.00 0.00 0.00 4.49
2565 7126 4.439426 GCTCATAGAGGTAGGATATGCGTG 60.439 50.000 0.00 0.00 0.00 5.34
2566 7127 3.697045 GCTCATAGAGGTAGGATATGCGT 59.303 47.826 0.00 0.00 0.00 5.24
2567 7128 3.696548 TGCTCATAGAGGTAGGATATGCG 59.303 47.826 0.00 0.00 0.00 4.73
2568 7129 5.004922 GTGCTCATAGAGGTAGGATATGC 57.995 47.826 0.00 0.00 0.00 3.14


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.