Multiple sequence alignment - TraesCS1D01G454900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G454900 chr1D 100.000 4887 0 0 1 4887 495420699 495425585 0.000000e+00 9025.0
1 TraesCS1D01G454900 chr1D 86.341 410 26 15 4507 4887 359496152 359495744 2.100000e-113 420.0
2 TraesCS1D01G454900 chr1D 85.608 403 33 11 4504 4887 160532750 160533146 2.740000e-107 399.0
3 TraesCS1D01G454900 chr1A 92.672 1924 95 26 1866 3757 593999858 594001767 0.000000e+00 2730.0
4 TraesCS1D01G454900 chr1A 87.759 580 47 15 3191 3757 594009045 594009613 0.000000e+00 656.0
5 TraesCS1D01G454900 chr1A 82.022 623 48 36 873 1470 593993164 593993747 5.730000e-129 472.0
6 TraesCS1D01G454900 chr1A 93.066 274 19 0 2894 3167 594008776 594009049 7.620000e-108 401.0
7 TraesCS1D01G454900 chr1A 91.566 166 11 3 1725 1889 593999686 593999849 4.920000e-55 226.0
8 TraesCS1D01G454900 chr1A 90.230 174 13 4 4137 4307 486510050 486510222 1.770000e-54 224.0
9 TraesCS1D01G454900 chr1A 79.193 322 22 25 554 856 593992880 593993175 1.080000e-41 182.0
10 TraesCS1D01G454900 chr1A 85.632 174 11 8 4292 4464 594002107 594002267 2.340000e-38 171.0
11 TraesCS1D01G454900 chr1A 84.865 185 6 6 1500 1662 593994255 593994439 3.030000e-37 167.0
12 TraesCS1D01G454900 chr1B 91.067 1612 80 28 1949 3521 689202511 689200925 0.000000e+00 2121.0
13 TraesCS1D01G454900 chr1B 89.966 887 38 14 1 856 689204400 689203534 0.000000e+00 1098.0
14 TraesCS1D01G454900 chr1B 91.182 567 18 4 3590 4154 689200824 689200288 0.000000e+00 741.0
15 TraesCS1D01G454900 chr1B 85.141 747 36 36 876 1584 689203542 689202833 0.000000e+00 695.0
16 TraesCS1D01G454900 chr1B 97.838 370 8 0 4294 4663 689200302 689199933 1.480000e-179 640.0
17 TraesCS1D01G454900 chr1B 88.030 401 27 10 4507 4887 65851133 65851532 5.770000e-124 455.0
18 TraesCS1D01G454900 chr1B 91.667 168 11 3 4151 4316 345647150 345647316 3.800000e-56 230.0
19 TraesCS1D01G454900 chr1B 96.154 52 2 0 3513 3564 689200873 689200822 8.720000e-13 86.1
20 TraesCS1D01G454900 chr1B 89.130 46 3 2 1735 1779 689202761 689202717 6.830000e-04 56.5
21 TraesCS1D01G454900 chr4B 90.274 401 17 9 4505 4887 348139035 348139431 5.650000e-139 505.0
22 TraesCS1D01G454900 chr4B 97.059 34 1 0 20 53 85597410 85597377 1.900000e-04 58.4
23 TraesCS1D01G454900 chr5D 96.842 285 8 1 1 284 479620943 479621227 4.430000e-130 475.0
24 TraesCS1D01G454900 chr5D 87.469 399 26 9 4507 4887 44029295 44028903 5.810000e-119 438.0
25 TraesCS1D01G454900 chr5D 94.152 171 9 1 4717 4887 560557686 560557517 4.850000e-65 259.0
26 TraesCS1D01G454900 chr5D 91.935 62 2 3 1686 1745 483518227 483518287 3.130000e-12 84.2
27 TraesCS1D01G454900 chr7D 88.972 399 22 8 4507 4887 351636045 351636439 1.590000e-129 473.0
28 TraesCS1D01G454900 chr7D 86.466 399 34 10 4507 4887 405860723 405860327 2.100000e-113 420.0
29 TraesCS1D01G454900 chr7D 93.605 172 10 1 4716 4887 347192956 347193126 6.280000e-64 255.0
30 TraesCS1D01G454900 chr7D 92.063 63 1 4 1692 1750 480127153 480127215 8.720000e-13 86.1
31 TraesCS1D01G454900 chr3D 88.722 399 21 6 4507 4887 4906183 4905791 2.660000e-127 466.0
32 TraesCS1D01G454900 chr3D 86.250 400 33 6 4506 4887 113577675 113577280 9.790000e-112 414.0
33 TraesCS1D01G454900 chr5A 87.000 400 33 6 4506 4887 69308863 69308465 2.700000e-117 433.0
34 TraesCS1D01G454900 chr5A 100.000 45 0 0 1 45 598330855 598330899 3.130000e-12 84.2
35 TraesCS1D01G454900 chr4D 95.376 173 8 0 4507 4679 443525030 443524858 4.820000e-70 276.0
36 TraesCS1D01G454900 chr4D 92.169 166 10 3 4139 4303 79311426 79311263 1.060000e-56 231.0
37 TraesCS1D01G454900 chr4D 92.121 165 8 5 4139 4302 220935051 220935211 1.370000e-55 228.0
38 TraesCS1D01G454900 chr2D 89.524 210 17 2 4507 4716 469944431 469944227 1.350000e-65 261.0
39 TraesCS1D01G454900 chr2D 97.203 143 3 1 4154 4295 153404578 153404720 1.760000e-59 241.0
40 TraesCS1D01G454900 chr2B 96.622 148 4 1 4149 4295 159278556 159278409 1.360000e-60 244.0
41 TraesCS1D01G454900 chr6D 95.333 150 6 1 4155 4303 332059984 332060133 2.270000e-58 237.0
42 TraesCS1D01G454900 chr6D 91.803 61 1 4 1691 1749 237187540 237187598 1.130000e-11 82.4
43 TraesCS1D01G454900 chr7B 92.547 161 11 1 4148 4307 647539323 647539483 3.800000e-56 230.0
44 TraesCS1D01G454900 chr2A 90.698 172 13 3 4149 4318 531499589 531499759 4.920000e-55 226.0
45 TraesCS1D01G454900 chr6B 91.045 67 2 4 1682 1745 199740565 199740500 2.420000e-13 87.9
46 TraesCS1D01G454900 chr4A 96.296 54 1 1 1697 1750 142348571 142348623 2.420000e-13 87.9
47 TraesCS1D01G454900 chr7A 93.220 59 2 2 1682 1738 339389222 339389164 8.720000e-13 86.1
48 TraesCS1D01G454900 chr7A 90.625 64 4 2 1683 1744 38814473 38814410 3.130000e-12 84.2
49 TraesCS1D01G454900 chr6A 90.625 64 2 4 1691 1752 532748914 532748853 1.130000e-11 82.4
50 TraesCS1D01G454900 chr3B 94.444 54 1 2 1697 1749 2308951 2308899 1.130000e-11 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G454900 chr1D 495420699 495425585 4886 False 9025.000000 9025 100.000000 1 4887 1 chr1D.!!$F2 4886
1 TraesCS1D01G454900 chr1A 593999686 594002267 2581 False 1042.333333 2730 89.956667 1725 4464 3 chr1A.!!$F3 2739
2 TraesCS1D01G454900 chr1A 594008776 594009613 837 False 528.500000 656 90.412500 2894 3757 2 chr1A.!!$F4 863
3 TraesCS1D01G454900 chr1A 593992880 593994439 1559 False 273.666667 472 82.026667 554 1662 3 chr1A.!!$F2 1108
4 TraesCS1D01G454900 chr1B 689199933 689204400 4467 True 776.800000 2121 91.496857 1 4663 7 chr1B.!!$R1 4662

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
847 889 0.395173 GGGGAGAGAAGAGCGACTCT 60.395 60.0 0.0 0.0 43.37 3.24 F
1672 2276 0.252650 CCCAACCCCAATCCCAATGT 60.253 55.0 0.0 0.0 0.00 2.71 F
2359 3081 0.464373 ATCACCACCACCATCATCGC 60.464 55.0 0.0 0.0 0.00 4.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2583 3317 1.145598 ATCTGCATCTGCGTGGGAG 59.854 57.895 0.0 0.0 45.83 4.30 R
2584 3318 1.153309 CATCTGCATCTGCGTGGGA 60.153 57.895 0.0 0.0 45.83 4.37 R
4168 5012 0.031010 CCCCTTCCCACTACTAGGCT 60.031 60.000 0.0 0.0 0.00 4.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 3.061369 ACAAAATAGGGGATAGGGGTCC 58.939 50.000 0.00 0.00 37.56 4.46
59 60 2.680370 GGGTCCCCTTGGCGAAGAT 61.680 63.158 10.40 0.00 0.00 2.40
61 62 1.153147 GTCCCCTTGGCGAAGATCC 60.153 63.158 10.40 0.00 0.00 3.36
72 73 3.513912 TGGCGAAGATCCTTTTGAGTCTA 59.486 43.478 0.00 0.00 0.00 2.59
83 84 7.393841 TCCTTTTGAGTCTAGAAGTAGCTAC 57.606 40.000 16.43 16.43 0.00 3.58
88 89 4.634883 TGAGTCTAGAAGTAGCTACCAACG 59.365 45.833 20.31 5.93 0.00 4.10
111 112 3.118884 TCGTTATTGACCTTGAGGGCTAC 60.119 47.826 4.21 0.00 45.91 3.58
124 125 3.007614 TGAGGGCTACACTAAGACAAACC 59.992 47.826 0.00 0.00 0.00 3.27
140 141 3.357079 CCTCGCACCCACTTGCAC 61.357 66.667 0.00 0.00 43.15 4.57
188 189 6.625873 AAGAGAATGTGTGAAAGAAAGGAC 57.374 37.500 0.00 0.00 0.00 3.85
215 216 8.995602 ACCTGACTTTATCTAGGGCGTTTTCG 62.996 46.154 0.00 0.00 36.64 3.46
216 217 3.528532 ACTTTATCTAGGGCGTTTTCGG 58.471 45.455 0.00 0.00 44.29 4.30
226 227 1.994779 GGCGTTTTCGGAGTCGATTTA 59.005 47.619 0.00 0.00 45.51 1.40
227 228 2.412770 GGCGTTTTCGGAGTCGATTTAA 59.587 45.455 0.00 0.00 45.51 1.52
268 269 0.904649 TCCGGTGAAGCTCATCATGT 59.095 50.000 0.00 0.00 0.00 3.21
299 301 8.748380 TCATAGAGCATGACAAGTATAATTCG 57.252 34.615 0.00 0.00 38.79 3.34
305 307 5.561499 GCATGACAAGTATAATTCGCATTCG 59.439 40.000 0.00 0.00 0.00 3.34
382 384 3.888323 TGTGCAACATGGTCTATTGTTGT 59.112 39.130 14.93 0.00 45.67 3.32
391 393 3.562141 TGGTCTATTGTTGTTGGTTGTCG 59.438 43.478 0.00 0.00 0.00 4.35
497 499 1.091771 GGGATGACACTGCGATGGTG 61.092 60.000 0.00 0.00 40.19 4.17
539 554 5.071250 TCAACTGGTCAAGAAGGTAAGCTTA 59.929 40.000 0.86 0.86 0.00 3.09
540 555 5.562298 ACTGGTCAAGAAGGTAAGCTTAA 57.438 39.130 7.99 0.00 0.00 1.85
541 556 6.128138 ACTGGTCAAGAAGGTAAGCTTAAT 57.872 37.500 7.99 0.00 0.00 1.40
542 557 6.543735 ACTGGTCAAGAAGGTAAGCTTAATT 58.456 36.000 7.99 6.33 0.00 1.40
570 585 5.396884 GCATTGTCCTAGGAGACCAATAGTT 60.397 44.000 20.15 3.19 35.83 2.24
571 586 6.183360 GCATTGTCCTAGGAGACCAATAGTTA 60.183 42.308 20.15 0.60 35.83 2.24
572 587 7.437748 CATTGTCCTAGGAGACCAATAGTTAG 58.562 42.308 20.15 8.71 35.83 2.34
573 588 6.088541 TGTCCTAGGAGACCAATAGTTAGT 57.911 41.667 13.15 0.00 35.83 2.24
588 603 8.554528 CCAATAGTTAGTGTTGCTCATGATTAG 58.445 37.037 0.00 0.00 0.00 1.73
589 604 7.721286 ATAGTTAGTGTTGCTCATGATTAGC 57.279 36.000 0.00 0.00 40.50 3.09
628 643 9.268268 TGTTCGATGATAAAAATATCCTACACC 57.732 33.333 0.00 0.00 0.00 4.16
728 756 7.813852 ATTTTAGTAAACAAAACACGTTGCA 57.186 28.000 0.00 0.00 31.29 4.08
729 757 7.813852 TTTTAGTAAACAAAACACGTTGCAT 57.186 28.000 0.00 0.00 31.29 3.96
730 758 7.439204 TTTAGTAAACAAAACACGTTGCATC 57.561 32.000 0.00 0.00 31.29 3.91
731 759 5.243426 AGTAAACAAAACACGTTGCATCT 57.757 34.783 0.00 0.00 31.29 2.90
732 760 6.366315 AGTAAACAAAACACGTTGCATCTA 57.634 33.333 0.00 0.00 31.29 1.98
795 827 4.115199 GAAGGGGGAGGCATGCGT 62.115 66.667 13.68 13.68 0.00 5.24
844 886 3.212275 GGGGGAGAGAAGAGCGAC 58.788 66.667 0.00 0.00 0.00 5.19
845 887 1.380650 GGGGGAGAGAAGAGCGACT 60.381 63.158 0.00 0.00 0.00 4.18
846 888 1.388837 GGGGGAGAGAAGAGCGACTC 61.389 65.000 0.00 0.00 0.00 3.36
847 889 0.395173 GGGGAGAGAAGAGCGACTCT 60.395 60.000 0.00 0.00 43.37 3.24
857 899 2.604046 GAGCGACTCTCTCTCTCTCT 57.396 55.000 0.00 0.00 38.78 3.10
858 900 2.474816 GAGCGACTCTCTCTCTCTCTC 58.525 57.143 0.00 0.00 38.78 3.20
859 901 2.101582 GAGCGACTCTCTCTCTCTCTCT 59.898 54.545 0.00 0.00 38.78 3.10
860 902 2.101582 AGCGACTCTCTCTCTCTCTCTC 59.898 54.545 0.00 0.00 0.00 3.20
861 903 2.101582 GCGACTCTCTCTCTCTCTCTCT 59.898 54.545 0.00 0.00 0.00 3.10
862 904 3.797184 GCGACTCTCTCTCTCTCTCTCTC 60.797 56.522 0.00 0.00 0.00 3.20
863 905 3.634448 CGACTCTCTCTCTCTCTCTCTCT 59.366 52.174 0.00 0.00 0.00 3.10
864 906 4.261405 CGACTCTCTCTCTCTCTCTCTCTC 60.261 54.167 0.00 0.00 0.00 3.20
865 907 4.877773 ACTCTCTCTCTCTCTCTCTCTCT 58.122 47.826 0.00 0.00 0.00 3.10
866 908 4.892934 ACTCTCTCTCTCTCTCTCTCTCTC 59.107 50.000 0.00 0.00 0.00 3.20
867 909 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
868 910 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
869 911 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
870 912 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
871 913 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
874 916 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
902 944 6.721208 TCTCTCTTATCCAACCTTTTGCAATT 59.279 34.615 0.00 0.00 0.00 2.32
1044 1114 2.305635 TCCCTTGACAAGCTTGCAGATA 59.694 45.455 26.27 9.40 0.00 1.98
1073 1147 6.162777 ACGGTAAACCAATTGAATTCCATTG 58.837 36.000 20.24 20.24 35.14 2.82
1077 1151 3.587923 ACCAATTGAATTCCATTGCACG 58.412 40.909 21.30 13.22 0.00 5.34
1081 1155 5.401550 CAATTGAATTCCATTGCACGTACT 58.598 37.500 16.67 0.00 0.00 2.73
1088 1162 2.805671 TCCATTGCACGTACTTGTGAAG 59.194 45.455 5.22 0.00 42.55 3.02
1089 1163 2.805671 CCATTGCACGTACTTGTGAAGA 59.194 45.455 5.22 0.00 42.55 2.87
1090 1164 3.249799 CCATTGCACGTACTTGTGAAGAA 59.750 43.478 5.22 0.00 42.55 2.52
1112 1186 3.000041 TGAATGAATTTGGTCGAGTCGG 59.000 45.455 13.54 0.00 0.00 4.79
1113 1187 1.369625 ATGAATTTGGTCGAGTCGGC 58.630 50.000 13.54 11.40 0.00 5.54
1124 1206 3.000819 AGTCGGCCGGTGATCCAA 61.001 61.111 27.83 0.00 0.00 3.53
1137 1219 5.278463 CCGGTGATCCAATTAATAAGGCAAG 60.278 44.000 0.00 0.00 0.00 4.01
1138 1220 5.278463 CGGTGATCCAATTAATAAGGCAAGG 60.278 44.000 2.68 0.00 0.00 3.61
1140 1222 5.068987 GTGATCCAATTAATAAGGCAAGGCA 59.931 40.000 0.00 0.00 0.00 4.75
1141 1223 5.840149 TGATCCAATTAATAAGGCAAGGCAT 59.160 36.000 0.00 0.00 0.00 4.40
1142 1224 6.327104 TGATCCAATTAATAAGGCAAGGCATT 59.673 34.615 0.00 0.00 36.30 3.56
1165 1247 1.187087 TGCTTGATGGAATGCATGCA 58.813 45.000 25.04 25.04 41.13 3.96
1166 1248 1.760029 TGCTTGATGGAATGCATGCAT 59.240 42.857 27.46 27.46 43.60 3.96
1374 1456 9.421806 CTCACATGCATCTTTTTGGTTTATTAA 57.578 29.630 0.00 0.00 0.00 1.40
1535 2114 5.477291 TGAAGAAAGAGAGACTCGTGGTATT 59.523 40.000 0.00 0.00 35.36 1.89
1658 2262 4.055360 GTTGTCTAAAATGCAACCCCAAC 58.945 43.478 0.00 0.00 37.20 3.77
1663 2267 0.695803 AAATGCAACCCCAACCCCAA 60.696 50.000 0.00 0.00 0.00 4.12
1664 2268 0.475437 AATGCAACCCCAACCCCAAT 60.475 50.000 0.00 0.00 0.00 3.16
1665 2269 0.909133 ATGCAACCCCAACCCCAATC 60.909 55.000 0.00 0.00 0.00 2.67
1666 2270 2.290287 GCAACCCCAACCCCAATCC 61.290 63.158 0.00 0.00 0.00 3.01
1667 2271 1.612146 CAACCCCAACCCCAATCCC 60.612 63.158 0.00 0.00 0.00 3.85
1668 2272 2.100983 AACCCCAACCCCAATCCCA 61.101 57.895 0.00 0.00 0.00 4.37
1671 2275 0.982326 CCCCAACCCCAATCCCAATG 60.982 60.000 0.00 0.00 0.00 2.82
1672 2276 0.252650 CCCAACCCCAATCCCAATGT 60.253 55.000 0.00 0.00 0.00 2.71
1673 2277 1.194218 CCAACCCCAATCCCAATGTC 58.806 55.000 0.00 0.00 0.00 3.06
1674 2278 1.273211 CCAACCCCAATCCCAATGTCT 60.273 52.381 0.00 0.00 0.00 3.41
1675 2279 2.024464 CCAACCCCAATCCCAATGTCTA 60.024 50.000 0.00 0.00 0.00 2.59
1676 2280 3.565449 CCAACCCCAATCCCAATGTCTAA 60.565 47.826 0.00 0.00 0.00 2.10
1677 2281 4.093011 CAACCCCAATCCCAATGTCTAAA 58.907 43.478 0.00 0.00 0.00 1.85
1678 2282 4.412060 ACCCCAATCCCAATGTCTAAAA 57.588 40.909 0.00 0.00 0.00 1.52
1679 2283 4.959080 ACCCCAATCCCAATGTCTAAAAT 58.041 39.130 0.00 0.00 0.00 1.82
1680 2284 6.098716 ACCCCAATCCCAATGTCTAAAATA 57.901 37.500 0.00 0.00 0.00 1.40
1681 2285 6.507568 ACCCCAATCCCAATGTCTAAAATAA 58.492 36.000 0.00 0.00 0.00 1.40
1682 2286 7.138934 ACCCCAATCCCAATGTCTAAAATAAT 58.861 34.615 0.00 0.00 0.00 1.28
1683 2287 8.293216 ACCCCAATCCCAATGTCTAAAATAATA 58.707 33.333 0.00 0.00 0.00 0.98
1684 2288 9.325248 CCCCAATCCCAATGTCTAAAATAATAT 57.675 33.333 0.00 0.00 0.00 1.28
1709 2313 7.201145 TGATCCTACTAAAGTGATCTAAACGC 58.799 38.462 10.21 0.00 35.02 4.84
1710 2314 6.770746 TCCTACTAAAGTGATCTAAACGCT 57.229 37.500 0.00 0.00 0.00 5.07
1711 2315 6.793349 TCCTACTAAAGTGATCTAAACGCTC 58.207 40.000 0.00 0.00 0.00 5.03
1712 2316 6.602406 TCCTACTAAAGTGATCTAAACGCTCT 59.398 38.462 0.00 0.00 0.00 4.09
1713 2317 7.122353 TCCTACTAAAGTGATCTAAACGCTCTT 59.878 37.037 0.00 0.00 0.00 2.85
1714 2318 8.404000 CCTACTAAAGTGATCTAAACGCTCTTA 58.596 37.037 0.00 0.00 0.00 2.10
1715 2319 9.953697 CTACTAAAGTGATCTAAACGCTCTTAT 57.046 33.333 0.00 0.00 0.00 1.73
1748 2353 7.702807 ACGGAGGGAGTACTATATATCCATA 57.297 40.000 0.00 0.00 33.24 2.74
1749 2354 8.290463 ACGGAGGGAGTACTATATATCCATAT 57.710 38.462 0.00 0.00 33.24 1.78
1826 2515 3.769739 AGTGTGTCTCTGGTTAATGCA 57.230 42.857 0.00 0.00 0.00 3.96
1827 2516 4.292186 AGTGTGTCTCTGGTTAATGCAT 57.708 40.909 0.00 0.00 0.00 3.96
1911 2632 8.166422 TGTTTTAAAGGGAGAGAGATTTGAAC 57.834 34.615 0.00 0.00 0.00 3.18
1917 2638 5.346270 AGGGAGAGAGATTTGAACCTAACT 58.654 41.667 0.00 0.00 0.00 2.24
1921 2642 7.310485 GGGAGAGAGATTTGAACCTAACTAACA 60.310 40.741 0.00 0.00 0.00 2.41
1922 2643 8.095169 GGAGAGAGATTTGAACCTAACTAACAA 58.905 37.037 0.00 0.00 0.00 2.83
1924 2645 9.274206 AGAGAGATTTGAACCTAACTAACAAAC 57.726 33.333 0.00 0.00 34.21 2.93
1925 2646 9.274206 GAGAGATTTGAACCTAACTAACAAACT 57.726 33.333 0.00 0.00 34.21 2.66
1927 2648 8.166422 AGATTTGAACCTAACTAACAAACTGG 57.834 34.615 0.00 0.00 34.21 4.00
1929 2650 6.930667 TTGAACCTAACTAACAAACTGGAC 57.069 37.500 0.00 0.00 0.00 4.02
1930 2651 5.991861 TGAACCTAACTAACAAACTGGACA 58.008 37.500 0.00 0.00 0.00 4.02
1932 2653 6.485313 TGAACCTAACTAACAAACTGGACATG 59.515 38.462 0.00 0.00 0.00 3.21
1933 2654 6.182507 ACCTAACTAACAAACTGGACATGA 57.817 37.500 0.00 0.00 0.00 3.07
1958 2680 7.081526 ACATGATGATCACACTTAAAAGCTC 57.918 36.000 0.00 0.00 0.00 4.09
2298 3020 2.203788 TGAGTGGTTCCTCGGCCT 60.204 61.111 0.00 0.00 34.04 5.19
2359 3081 0.464373 ATCACCACCACCATCATCGC 60.464 55.000 0.00 0.00 0.00 4.58
2523 3257 1.836604 GGAGCAGGGCTAGGAGGAG 60.837 68.421 0.00 0.00 39.88 3.69
2527 3261 0.766288 GCAGGGCTAGGAGGAGGAAT 60.766 60.000 0.00 0.00 0.00 3.01
2533 3267 3.577919 GGCTAGGAGGAGGAATCTACAA 58.422 50.000 0.00 0.00 0.00 2.41
2534 3268 3.322541 GGCTAGGAGGAGGAATCTACAAC 59.677 52.174 0.00 0.00 0.00 3.32
2535 3269 4.219919 GCTAGGAGGAGGAATCTACAACT 58.780 47.826 0.00 0.00 0.00 3.16
2536 3270 5.386924 GCTAGGAGGAGGAATCTACAACTA 58.613 45.833 0.00 0.00 0.00 2.24
2545 3279 3.868077 GGAATCTACAACTACAGCAGCAG 59.132 47.826 0.00 0.00 0.00 4.24
2546 3280 3.533606 ATCTACAACTACAGCAGCAGG 57.466 47.619 0.00 0.00 0.00 4.85
2555 3289 2.104859 CAGCAGCAGGACACCGATG 61.105 63.158 0.00 0.00 0.00 3.84
2560 3294 2.501128 CAGGACACCGATGGCGAT 59.499 61.111 0.00 0.00 40.82 4.58
2562 3296 2.588877 GGACACCGATGGCGATGG 60.589 66.667 0.00 0.00 34.53 3.51
2574 3308 4.292178 CGATGGCGAGGAGGAGGC 62.292 72.222 0.00 0.00 40.82 4.70
2593 3357 4.767255 GTGGAGGCTCCCACGCAG 62.767 72.222 30.03 0.00 46.00 5.18
2599 3363 3.200593 GCTCCCACGCAGATGCAG 61.201 66.667 5.55 0.69 42.21 4.41
2839 3603 3.461773 ATGGCCTCCCTCGTCACG 61.462 66.667 3.32 0.00 0.00 4.35
3181 3945 2.174107 CCGTTCGACGTCGTGCTA 59.826 61.111 34.40 15.32 40.58 3.49
3626 4457 2.216488 GTGTAGCATCTACAATCACGCG 59.784 50.000 3.53 3.53 0.00 6.01
3682 4513 0.461548 TTGGCGCCAAAACAACATGA 59.538 45.000 38.61 13.20 32.44 3.07
4128 4972 2.956333 TGTATGTCGATTCGATGGAGGT 59.044 45.455 12.54 0.00 38.42 3.85
4134 4978 1.405463 CGATTCGATGGAGGTGAGACA 59.595 52.381 0.00 0.00 0.00 3.41
4137 4981 0.322187 TCGATGGAGGTGAGACACGA 60.322 55.000 0.00 0.00 34.83 4.35
4138 4982 0.179161 CGATGGAGGTGAGACACGAC 60.179 60.000 0.00 0.00 34.83 4.34
4139 4983 0.888619 GATGGAGGTGAGACACGACA 59.111 55.000 0.00 0.00 34.83 4.35
4140 4984 1.272490 GATGGAGGTGAGACACGACAA 59.728 52.381 0.00 0.00 34.83 3.18
4141 4985 0.673985 TGGAGGTGAGACACGACAAG 59.326 55.000 0.00 0.00 34.83 3.16
4142 4986 0.959553 GGAGGTGAGACACGACAAGA 59.040 55.000 0.00 0.00 34.83 3.02
4143 4987 1.068194 GGAGGTGAGACACGACAAGAG 60.068 57.143 0.00 0.00 34.83 2.85
4144 4988 1.609555 GAGGTGAGACACGACAAGAGT 59.390 52.381 0.00 0.00 34.83 3.24
4145 4989 1.338337 AGGTGAGACACGACAAGAGTG 59.662 52.381 0.00 0.00 44.57 3.51
4146 4990 1.603172 GGTGAGACACGACAAGAGTGG 60.603 57.143 0.00 0.00 43.41 4.00
4150 4994 2.433868 GACACGACAAGAGTGGCTAA 57.566 50.000 0.00 0.00 43.93 3.09
4151 4995 2.750948 GACACGACAAGAGTGGCTAAA 58.249 47.619 0.00 0.00 43.93 1.85
4152 4996 3.326747 GACACGACAAGAGTGGCTAAAT 58.673 45.455 0.00 0.00 43.93 1.40
4153 4997 3.326747 ACACGACAAGAGTGGCTAAATC 58.673 45.455 0.00 0.00 43.41 2.17
4154 4998 2.345641 CACGACAAGAGTGGCTAAATCG 59.654 50.000 0.00 0.00 36.06 3.34
4155 4999 1.324736 CGACAAGAGTGGCTAAATCGC 59.675 52.381 0.00 0.00 0.00 4.58
4156 5000 2.346803 GACAAGAGTGGCTAAATCGCA 58.653 47.619 0.00 0.00 0.00 5.10
4157 5001 2.349886 GACAAGAGTGGCTAAATCGCAG 59.650 50.000 0.00 0.00 0.00 5.18
4158 5002 2.028112 ACAAGAGTGGCTAAATCGCAGA 60.028 45.455 0.00 0.00 45.75 4.26
4159 5003 2.301577 AGAGTGGCTAAATCGCAGAC 57.698 50.000 0.00 0.00 42.51 3.51
4160 5004 1.827969 AGAGTGGCTAAATCGCAGACT 59.172 47.619 0.00 0.00 42.51 3.24
4161 5005 3.024547 AGAGTGGCTAAATCGCAGACTA 58.975 45.455 0.00 0.00 42.51 2.59
4162 5006 3.447586 AGAGTGGCTAAATCGCAGACTAA 59.552 43.478 0.00 0.00 42.51 2.24
4163 5007 3.786635 AGTGGCTAAATCGCAGACTAAG 58.213 45.455 0.00 0.00 42.51 2.18
4164 5008 2.866762 GTGGCTAAATCGCAGACTAAGG 59.133 50.000 0.00 0.00 42.51 2.69
4165 5009 1.867865 GGCTAAATCGCAGACTAAGGC 59.132 52.381 0.00 0.00 42.51 4.35
4166 5010 2.550978 GCTAAATCGCAGACTAAGGCA 58.449 47.619 0.00 0.00 42.51 4.75
4167 5011 3.134458 GCTAAATCGCAGACTAAGGCAT 58.866 45.455 0.00 0.00 42.51 4.40
4168 5012 4.307432 GCTAAATCGCAGACTAAGGCATA 58.693 43.478 0.00 0.00 42.51 3.14
4169 5013 4.387256 GCTAAATCGCAGACTAAGGCATAG 59.613 45.833 0.00 0.00 42.51 2.23
4170 5014 2.447244 ATCGCAGACTAAGGCATAGC 57.553 50.000 0.00 0.00 42.51 2.97
4171 5015 1.001406 ATCGCAGACTAAGGCATAGCC 59.999 52.381 0.00 0.00 46.38 3.93
4182 5026 2.011122 GGCATAGCCTAGTAGTGGGA 57.989 55.000 3.71 0.00 46.69 4.37
4183 5027 2.326428 GGCATAGCCTAGTAGTGGGAA 58.674 52.381 3.71 0.00 46.69 3.97
4184 5028 2.300437 GGCATAGCCTAGTAGTGGGAAG 59.700 54.545 3.71 0.00 46.69 3.46
4185 5029 2.300437 GCATAGCCTAGTAGTGGGAAGG 59.700 54.545 3.71 0.00 0.00 3.46
4186 5030 2.769602 TAGCCTAGTAGTGGGAAGGG 57.230 55.000 3.71 0.00 0.00 3.95
4187 5031 0.031010 AGCCTAGTAGTGGGAAGGGG 60.031 60.000 3.71 0.00 0.00 4.79
4188 5032 1.697082 GCCTAGTAGTGGGAAGGGGC 61.697 65.000 3.71 0.00 0.00 5.80
4189 5033 0.031010 CCTAGTAGTGGGAAGGGGCT 60.031 60.000 0.00 0.00 0.00 5.19
4190 5034 1.123928 CTAGTAGTGGGAAGGGGCTG 58.876 60.000 0.00 0.00 0.00 4.85
4191 5035 0.714180 TAGTAGTGGGAAGGGGCTGA 59.286 55.000 0.00 0.00 0.00 4.26
4192 5036 0.044855 AGTAGTGGGAAGGGGCTGAT 59.955 55.000 0.00 0.00 0.00 2.90
4193 5037 0.181350 GTAGTGGGAAGGGGCTGATG 59.819 60.000 0.00 0.00 0.00 3.07
4194 5038 1.635817 TAGTGGGAAGGGGCTGATGC 61.636 60.000 0.00 0.00 38.76 3.91
4204 5048 2.440980 GCTGATGCCTTCCCACCC 60.441 66.667 0.00 0.00 0.00 4.61
4205 5049 3.089838 CTGATGCCTTCCCACCCA 58.910 61.111 0.00 0.00 0.00 4.51
4206 5050 1.379044 CTGATGCCTTCCCACCCAC 60.379 63.158 0.00 0.00 0.00 4.61
4207 5051 2.043953 GATGCCTTCCCACCCACC 60.044 66.667 0.00 0.00 0.00 4.61
4208 5052 3.662117 GATGCCTTCCCACCCACCC 62.662 68.421 0.00 0.00 0.00 4.61
4210 5054 4.366684 GCCTTCCCACCCACCCAG 62.367 72.222 0.00 0.00 0.00 4.45
4211 5055 3.661648 CCTTCCCACCCACCCAGG 61.662 72.222 0.00 0.00 37.03 4.45
4212 5056 2.858974 CTTCCCACCCACCCAGGT 60.859 66.667 0.00 0.00 42.40 4.00
4213 5057 2.370403 TTCCCACCCACCCAGGTT 60.370 61.111 0.00 0.00 38.39 3.50
4214 5058 2.426305 CTTCCCACCCACCCAGGTTC 62.426 65.000 0.00 0.00 38.39 3.62
4215 5059 3.182263 CCCACCCACCCAGGTTCA 61.182 66.667 0.00 0.00 38.39 3.18
4216 5060 2.773527 CCCACCCACCCAGGTTCAA 61.774 63.158 0.00 0.00 38.39 2.69
4217 5061 1.228552 CCACCCACCCAGGTTCAAG 60.229 63.158 0.00 0.00 38.39 3.02
4218 5062 1.228552 CACCCACCCAGGTTCAAGG 60.229 63.158 0.00 0.00 38.39 3.61
4219 5063 2.283173 CCCACCCAGGTTCAAGGC 60.283 66.667 0.00 0.00 34.66 4.35
4220 5064 2.520458 CCACCCAGGTTCAAGGCA 59.480 61.111 0.00 0.00 0.00 4.75
4221 5065 1.077265 CCACCCAGGTTCAAGGCAT 59.923 57.895 0.00 0.00 0.00 4.40
4222 5066 1.252904 CCACCCAGGTTCAAGGCATG 61.253 60.000 0.00 0.00 0.00 4.06
4223 5067 1.077265 ACCCAGGTTCAAGGCATGG 59.923 57.895 0.00 0.00 37.52 3.66
4224 5068 1.077265 CCCAGGTTCAAGGCATGGT 59.923 57.895 0.00 0.00 36.19 3.55
4225 5069 0.331278 CCCAGGTTCAAGGCATGGTA 59.669 55.000 0.00 0.00 36.19 3.25
4226 5070 1.463674 CCAGGTTCAAGGCATGGTAC 58.536 55.000 0.00 0.00 33.58 3.34
4227 5071 1.004745 CCAGGTTCAAGGCATGGTACT 59.995 52.381 0.00 0.00 33.58 2.73
4228 5072 2.555227 CCAGGTTCAAGGCATGGTACTT 60.555 50.000 0.00 0.00 33.58 2.24
4229 5073 3.308117 CCAGGTTCAAGGCATGGTACTTA 60.308 47.826 0.00 0.00 33.58 2.24
4230 5074 3.689649 CAGGTTCAAGGCATGGTACTTAC 59.310 47.826 0.00 0.00 0.00 2.34
4231 5075 3.329520 AGGTTCAAGGCATGGTACTTACA 59.670 43.478 0.00 0.00 0.00 2.41
4232 5076 4.076394 GGTTCAAGGCATGGTACTTACAA 58.924 43.478 0.00 0.00 0.00 2.41
4233 5077 4.705023 GGTTCAAGGCATGGTACTTACAAT 59.295 41.667 0.00 0.00 0.00 2.71
4234 5078 5.185056 GGTTCAAGGCATGGTACTTACAATT 59.815 40.000 0.00 0.00 0.00 2.32
4235 5079 6.295067 GGTTCAAGGCATGGTACTTACAATTT 60.295 38.462 0.00 0.00 0.00 1.82
4236 5080 6.266168 TCAAGGCATGGTACTTACAATTTG 57.734 37.500 0.00 0.00 0.00 2.32
4237 5081 5.184864 TCAAGGCATGGTACTTACAATTTGG 59.815 40.000 0.78 0.00 0.00 3.28
4238 5082 4.023291 AGGCATGGTACTTACAATTTGGG 58.977 43.478 0.78 0.00 0.00 4.12
4239 5083 3.767131 GGCATGGTACTTACAATTTGGGT 59.233 43.478 0.78 0.07 0.00 4.51
4240 5084 4.221924 GGCATGGTACTTACAATTTGGGTT 59.778 41.667 0.78 0.00 0.00 4.11
4241 5085 5.279758 GGCATGGTACTTACAATTTGGGTTT 60.280 40.000 0.78 0.00 0.00 3.27
4242 5086 5.637387 GCATGGTACTTACAATTTGGGTTTG 59.363 40.000 0.78 0.00 0.00 2.93
4243 5087 6.740122 GCATGGTACTTACAATTTGGGTTTGT 60.740 38.462 0.78 0.00 40.30 2.83
4244 5088 6.793505 TGGTACTTACAATTTGGGTTTGTT 57.206 33.333 0.78 0.00 38.26 2.83
4245 5089 6.574350 TGGTACTTACAATTTGGGTTTGTTG 58.426 36.000 0.78 0.00 38.26 3.33
4246 5090 5.464057 GGTACTTACAATTTGGGTTTGTTGC 59.536 40.000 0.78 0.00 38.26 4.17
4247 5091 5.091261 ACTTACAATTTGGGTTTGTTGCA 57.909 34.783 0.78 0.00 38.26 4.08
4248 5092 4.873259 ACTTACAATTTGGGTTTGTTGCAC 59.127 37.500 0.78 0.00 38.26 4.57
4249 5093 2.637947 ACAATTTGGGTTTGTTGCACC 58.362 42.857 0.78 0.00 33.64 5.01
4250 5094 2.026822 ACAATTTGGGTTTGTTGCACCA 60.027 40.909 0.78 0.00 33.64 4.17
4251 5095 3.012518 CAATTTGGGTTTGTTGCACCAA 58.987 40.909 0.00 0.00 40.94 3.67
4252 5096 3.574354 ATTTGGGTTTGTTGCACCAAT 57.426 38.095 0.00 0.00 42.09 3.16
4253 5097 3.356529 TTTGGGTTTGTTGCACCAATT 57.643 38.095 0.00 0.00 42.09 2.32
4254 5098 4.487714 TTTGGGTTTGTTGCACCAATTA 57.512 36.364 0.00 0.00 42.09 1.40
4255 5099 4.696479 TTGGGTTTGTTGCACCAATTAT 57.304 36.364 0.00 0.00 38.02 1.28
4256 5100 5.808366 TTGGGTTTGTTGCACCAATTATA 57.192 34.783 0.00 0.00 38.02 0.98
4257 5101 6.365970 TTGGGTTTGTTGCACCAATTATAT 57.634 33.333 0.00 0.00 38.02 0.86
4258 5102 6.365970 TGGGTTTGTTGCACCAATTATATT 57.634 33.333 0.00 0.00 35.80 1.28
4259 5103 6.169094 TGGGTTTGTTGCACCAATTATATTG 58.831 36.000 0.00 0.00 35.80 1.90
4260 5104 6.169800 GGGTTTGTTGCACCAATTATATTGT 58.830 36.000 0.00 0.00 35.80 2.71
4261 5105 7.039011 TGGGTTTGTTGCACCAATTATATTGTA 60.039 33.333 0.00 0.00 35.80 2.41
4262 5106 7.491048 GGGTTTGTTGCACCAATTATATTGTAG 59.509 37.037 0.00 0.00 35.80 2.74
4263 5107 7.491048 GGTTTGTTGCACCAATTATATTGTAGG 59.509 37.037 0.00 0.00 34.04 3.18
4264 5108 6.707440 TGTTGCACCAATTATATTGTAGGG 57.293 37.500 0.00 0.00 0.00 3.53
4265 5109 5.596361 TGTTGCACCAATTATATTGTAGGGG 59.404 40.000 0.00 0.00 0.00 4.79
4266 5110 4.735369 TGCACCAATTATATTGTAGGGGG 58.265 43.478 0.00 0.00 0.00 5.40
4267 5111 4.169068 TGCACCAATTATATTGTAGGGGGT 59.831 41.667 0.00 0.00 0.00 4.95
4268 5112 4.765339 GCACCAATTATATTGTAGGGGGTC 59.235 45.833 0.00 0.00 0.00 4.46
4269 5113 5.321927 CACCAATTATATTGTAGGGGGTCC 58.678 45.833 0.00 0.00 0.00 4.46
4270 5114 4.355889 ACCAATTATATTGTAGGGGGTCCC 59.644 45.833 0.00 0.00 45.90 4.46
4279 5123 4.912897 GGGGGTCCCTTACAGTCT 57.087 61.111 8.15 0.00 41.34 3.24
4280 5124 3.100039 GGGGGTCCCTTACAGTCTT 57.900 57.895 8.15 0.00 41.34 3.01
4281 5125 1.369403 GGGGGTCCCTTACAGTCTTT 58.631 55.000 8.15 0.00 41.34 2.52
4282 5126 1.281287 GGGGGTCCCTTACAGTCTTTC 59.719 57.143 8.15 0.00 41.34 2.62
4283 5127 2.267192 GGGGTCCCTTACAGTCTTTCT 58.733 52.381 8.15 0.00 0.00 2.52
4284 5128 5.205857 GGGGGTCCCTTACAGTCTTTCTG 62.206 56.522 8.15 0.00 44.11 3.02
4368 5212 0.819582 CTTAACCGACGGCCCTCTTA 59.180 55.000 15.39 1.42 0.00 2.10
4450 5294 4.095610 CAAAAGAGTGGACGAAACAACAC 58.904 43.478 0.00 0.00 0.00 3.32
4465 5309 7.120579 ACGAAACAACACATATACCAATGTCAT 59.879 33.333 0.00 0.00 38.01 3.06
4544 5388 6.212888 GGATGCAACTCAATTGTATTCCTT 57.787 37.500 5.13 0.00 42.98 3.36
4551 5395 7.661040 CAACTCAATTGTATTCCTTGGAGTTT 58.339 34.615 5.13 0.00 33.20 2.66
4673 5517 9.210329 AGTAATACAAATATGTCACGTTCAACA 57.790 29.630 0.00 0.00 41.05 3.33
4674 5518 9.982291 GTAATACAAATATGTCACGTTCAACAT 57.018 29.630 11.45 11.45 41.05 2.71
4676 5520 5.938322 ACAAATATGTCACGTTCAACATCC 58.062 37.500 10.36 0.00 37.33 3.51
4677 5521 5.106317 ACAAATATGTCACGTTCAACATCCC 60.106 40.000 10.36 0.00 37.33 3.85
4678 5522 1.821216 ATGTCACGTTCAACATCCCC 58.179 50.000 2.88 0.00 30.35 4.81
4679 5523 0.250553 TGTCACGTTCAACATCCCCC 60.251 55.000 0.00 0.00 0.00 5.40
4716 5560 3.564027 GGCGTCGGCGATGGAAAG 61.564 66.667 28.36 10.44 41.24 2.62
4717 5561 2.508439 GCGTCGGCGATGGAAAGA 60.508 61.111 28.36 0.00 41.33 2.52
4718 5562 2.098233 GCGTCGGCGATGGAAAGAA 61.098 57.895 28.36 0.00 41.33 2.52
4719 5563 1.429148 GCGTCGGCGATGGAAAGAAT 61.429 55.000 28.36 0.00 41.33 2.40
4720 5564 1.006832 CGTCGGCGATGGAAAGAATT 58.993 50.000 21.01 0.00 41.33 2.17
4721 5565 1.267532 CGTCGGCGATGGAAAGAATTG 60.268 52.381 21.01 0.00 41.33 2.32
4722 5566 0.732571 TCGGCGATGGAAAGAATTGC 59.267 50.000 4.99 0.00 34.22 3.56
4723 5567 0.451383 CGGCGATGGAAAGAATTGCA 59.549 50.000 0.00 0.00 41.38 4.08
4724 5568 1.532505 CGGCGATGGAAAGAATTGCAG 60.533 52.381 0.00 0.00 40.42 4.41
4725 5569 1.553308 GCGATGGAAAGAATTGCAGC 58.447 50.000 0.00 0.00 40.42 5.25
4727 5571 2.199291 GATGGAAAGAATTGCAGCGG 57.801 50.000 0.00 0.00 40.42 5.52
4728 5572 1.474077 GATGGAAAGAATTGCAGCGGT 59.526 47.619 0.00 0.00 40.42 5.68
4729 5573 1.327303 TGGAAAGAATTGCAGCGGTT 58.673 45.000 0.00 0.00 31.30 4.44
4730 5574 1.000385 TGGAAAGAATTGCAGCGGTTG 60.000 47.619 0.00 0.00 31.30 3.77
4731 5575 1.669795 GGAAAGAATTGCAGCGGTTGG 60.670 52.381 0.00 0.00 0.00 3.77
4732 5576 1.269448 GAAAGAATTGCAGCGGTTGGA 59.731 47.619 0.00 0.00 0.00 3.53
4733 5577 1.327303 AAGAATTGCAGCGGTTGGAA 58.673 45.000 0.77 0.77 41.61 3.53
4734 5578 0.883833 AGAATTGCAGCGGTTGGAAG 59.116 50.000 4.98 0.00 40.65 3.46
4735 5579 0.733909 GAATTGCAGCGGTTGGAAGC 60.734 55.000 4.98 0.00 40.65 3.86
4736 5580 2.158561 AATTGCAGCGGTTGGAAGCC 62.159 55.000 4.98 0.00 40.65 4.35
4739 5583 2.282462 CAGCGGTTGGAAGCCCTT 60.282 61.111 0.00 0.00 0.00 3.95
4740 5584 1.903404 CAGCGGTTGGAAGCCCTTT 60.903 57.895 0.00 0.00 0.00 3.11
4741 5585 1.903404 AGCGGTTGGAAGCCCTTTG 60.903 57.895 0.00 0.00 0.00 2.77
4742 5586 2.931068 GCGGTTGGAAGCCCTTTGG 61.931 63.158 0.00 0.00 0.00 3.28
4743 5587 1.530655 CGGTTGGAAGCCCTTTGGT 60.531 57.895 0.00 0.00 0.00 3.67
4744 5588 1.524008 CGGTTGGAAGCCCTTTGGTC 61.524 60.000 0.00 0.00 0.00 4.02
4745 5589 0.469144 GGTTGGAAGCCCTTTGGTCA 60.469 55.000 0.00 0.00 0.00 4.02
4746 5590 1.632589 GTTGGAAGCCCTTTGGTCAT 58.367 50.000 0.00 0.00 0.00 3.06
4747 5591 2.556559 GGTTGGAAGCCCTTTGGTCATA 60.557 50.000 0.00 0.00 0.00 2.15
4748 5592 3.161866 GTTGGAAGCCCTTTGGTCATAA 58.838 45.455 0.00 0.00 0.00 1.90
4749 5593 3.756082 TGGAAGCCCTTTGGTCATAAT 57.244 42.857 0.00 0.00 0.00 1.28
4750 5594 3.364549 TGGAAGCCCTTTGGTCATAATG 58.635 45.455 0.00 0.00 0.00 1.90
4751 5595 3.245586 TGGAAGCCCTTTGGTCATAATGT 60.246 43.478 0.00 0.00 0.00 2.71
4752 5596 3.381590 GGAAGCCCTTTGGTCATAATGTC 59.618 47.826 0.00 0.00 0.00 3.06
4753 5597 2.643551 AGCCCTTTGGTCATAATGTCG 58.356 47.619 0.00 0.00 0.00 4.35
4754 5598 1.676006 GCCCTTTGGTCATAATGTCGG 59.324 52.381 0.00 0.00 0.00 4.79
4755 5599 1.676006 CCCTTTGGTCATAATGTCGGC 59.324 52.381 0.00 0.00 0.00 5.54
4756 5600 2.364632 CCTTTGGTCATAATGTCGGCA 58.635 47.619 0.00 0.00 0.00 5.69
4757 5601 2.752354 CCTTTGGTCATAATGTCGGCAA 59.248 45.455 0.00 0.00 0.00 4.52
4758 5602 3.192422 CCTTTGGTCATAATGTCGGCAAA 59.808 43.478 0.00 0.00 0.00 3.68
4759 5603 4.142182 CCTTTGGTCATAATGTCGGCAAAT 60.142 41.667 0.00 0.00 0.00 2.32
4760 5604 5.398603 TTTGGTCATAATGTCGGCAAATT 57.601 34.783 0.00 0.00 0.00 1.82
4761 5605 4.368874 TGGTCATAATGTCGGCAAATTG 57.631 40.909 0.00 0.00 0.00 2.32
4762 5606 3.761218 TGGTCATAATGTCGGCAAATTGT 59.239 39.130 0.00 0.00 0.00 2.71
4763 5607 4.219507 TGGTCATAATGTCGGCAAATTGTT 59.780 37.500 0.00 0.00 0.00 2.83
4764 5608 4.562394 GGTCATAATGTCGGCAAATTGTTG 59.438 41.667 0.00 0.00 37.83 3.33
4765 5609 4.562394 GTCATAATGTCGGCAAATTGTTGG 59.438 41.667 0.00 0.00 35.10 3.77
4766 5610 2.453983 AATGTCGGCAAATTGTTGGG 57.546 45.000 0.00 0.00 35.10 4.12
4767 5611 1.337118 ATGTCGGCAAATTGTTGGGT 58.663 45.000 0.00 0.00 35.10 4.51
4768 5612 0.387202 TGTCGGCAAATTGTTGGGTG 59.613 50.000 0.00 0.00 35.10 4.61
4769 5613 0.319469 GTCGGCAAATTGTTGGGTGG 60.319 55.000 0.00 0.00 35.10 4.61
4770 5614 0.757188 TCGGCAAATTGTTGGGTGGT 60.757 50.000 0.00 0.00 35.10 4.16
4771 5615 0.319469 CGGCAAATTGTTGGGTGGTC 60.319 55.000 0.00 0.00 35.10 4.02
4772 5616 0.319469 GGCAAATTGTTGGGTGGTCG 60.319 55.000 0.00 0.00 35.10 4.79
4773 5617 0.319469 GCAAATTGTTGGGTGGTCGG 60.319 55.000 0.00 0.00 35.10 4.79
4774 5618 1.036707 CAAATTGTTGGGTGGTCGGT 58.963 50.000 0.00 0.00 0.00 4.69
4775 5619 2.231529 CAAATTGTTGGGTGGTCGGTA 58.768 47.619 0.00 0.00 0.00 4.02
4776 5620 1.900245 AATTGTTGGGTGGTCGGTAC 58.100 50.000 0.00 0.00 0.00 3.34
4777 5621 0.766131 ATTGTTGGGTGGTCGGTACA 59.234 50.000 0.00 0.00 0.00 2.90
4778 5622 0.766131 TTGTTGGGTGGTCGGTACAT 59.234 50.000 0.00 0.00 0.00 2.29
4779 5623 0.035598 TGTTGGGTGGTCGGTACATG 59.964 55.000 0.00 0.00 0.00 3.21
4780 5624 0.322322 GTTGGGTGGTCGGTACATGA 59.678 55.000 0.00 0.00 0.00 3.07
4781 5625 1.057471 TTGGGTGGTCGGTACATGAA 58.943 50.000 0.00 0.00 0.00 2.57
4782 5626 0.611200 TGGGTGGTCGGTACATGAAG 59.389 55.000 0.00 0.00 0.00 3.02
4783 5627 0.899720 GGGTGGTCGGTACATGAAGA 59.100 55.000 0.00 0.00 0.00 2.87
4784 5628 1.276989 GGGTGGTCGGTACATGAAGAA 59.723 52.381 0.00 0.00 0.00 2.52
4785 5629 2.344025 GGTGGTCGGTACATGAAGAAC 58.656 52.381 0.00 0.00 0.00 3.01
4786 5630 2.289195 GGTGGTCGGTACATGAAGAACA 60.289 50.000 0.00 0.00 0.00 3.18
4787 5631 2.735134 GTGGTCGGTACATGAAGAACAC 59.265 50.000 0.00 8.18 42.87 3.32
4788 5632 1.990563 GGTCGGTACATGAAGAACACG 59.009 52.381 0.00 0.00 0.00 4.49
4789 5633 2.352030 GGTCGGTACATGAAGAACACGA 60.352 50.000 0.00 0.00 0.00 4.35
4790 5634 3.311106 GTCGGTACATGAAGAACACGAA 58.689 45.455 0.00 0.00 0.00 3.85
4791 5635 3.364023 GTCGGTACATGAAGAACACGAAG 59.636 47.826 0.00 0.00 0.00 3.79
4792 5636 2.092211 CGGTACATGAAGAACACGAAGC 59.908 50.000 0.00 0.00 0.00 3.86
4793 5637 3.326747 GGTACATGAAGAACACGAAGCT 58.673 45.455 0.00 0.00 0.00 3.74
4794 5638 3.123621 GGTACATGAAGAACACGAAGCTG 59.876 47.826 0.00 0.00 0.00 4.24
4795 5639 3.111853 ACATGAAGAACACGAAGCTGA 57.888 42.857 0.00 0.00 0.00 4.26
4796 5640 2.802816 ACATGAAGAACACGAAGCTGAC 59.197 45.455 0.00 0.00 0.00 3.51
4797 5641 2.890808 TGAAGAACACGAAGCTGACT 57.109 45.000 0.00 0.00 0.00 3.41
4798 5642 2.743938 TGAAGAACACGAAGCTGACTC 58.256 47.619 0.00 0.00 0.00 3.36
4799 5643 2.100749 TGAAGAACACGAAGCTGACTCA 59.899 45.455 0.00 0.00 0.00 3.41
4800 5644 2.890808 AGAACACGAAGCTGACTCAA 57.109 45.000 0.00 0.00 0.00 3.02
4801 5645 2.474816 AGAACACGAAGCTGACTCAAC 58.525 47.619 0.00 0.00 0.00 3.18
4802 5646 2.101582 AGAACACGAAGCTGACTCAACT 59.898 45.455 0.00 0.00 0.00 3.16
4803 5647 1.858091 ACACGAAGCTGACTCAACTG 58.142 50.000 0.00 0.00 0.00 3.16
4804 5648 1.409064 ACACGAAGCTGACTCAACTGA 59.591 47.619 0.00 0.00 0.00 3.41
4805 5649 2.159099 ACACGAAGCTGACTCAACTGAA 60.159 45.455 0.00 0.00 0.00 3.02
4806 5650 2.219674 CACGAAGCTGACTCAACTGAAC 59.780 50.000 0.00 0.00 0.00 3.18
4807 5651 1.795286 CGAAGCTGACTCAACTGAACC 59.205 52.381 0.00 0.00 0.00 3.62
4808 5652 2.546795 CGAAGCTGACTCAACTGAACCT 60.547 50.000 0.00 0.00 0.00 3.50
4809 5653 3.471680 GAAGCTGACTCAACTGAACCTT 58.528 45.455 0.00 0.00 0.00 3.50
4810 5654 3.118905 AGCTGACTCAACTGAACCTTC 57.881 47.619 0.00 0.00 0.00 3.46
4811 5655 2.703007 AGCTGACTCAACTGAACCTTCT 59.297 45.455 0.00 0.00 0.00 2.85
4812 5656 3.063485 GCTGACTCAACTGAACCTTCTC 58.937 50.000 0.00 0.00 0.00 2.87
4813 5657 3.312828 CTGACTCAACTGAACCTTCTCG 58.687 50.000 0.00 0.00 0.00 4.04
4814 5658 2.062519 GACTCAACTGAACCTTCTCGC 58.937 52.381 0.00 0.00 0.00 5.03
4815 5659 1.063806 CTCAACTGAACCTTCTCGCG 58.936 55.000 0.00 0.00 0.00 5.87
4816 5660 0.319555 TCAACTGAACCTTCTCGCGG 60.320 55.000 6.13 0.00 0.00 6.46
4817 5661 0.319555 CAACTGAACCTTCTCGCGGA 60.320 55.000 6.13 0.00 0.00 5.54
4818 5662 0.319641 AACTGAACCTTCTCGCGGAC 60.320 55.000 6.13 0.00 0.00 4.79
4819 5663 1.801913 CTGAACCTTCTCGCGGACG 60.802 63.158 6.13 0.00 42.01 4.79
4848 5692 6.594788 AACATCAAGTTCAATATGCTTGGT 57.405 33.333 0.00 0.00 39.80 3.67
4850 5694 4.439305 TCAAGTTCAATATGCTTGGTGC 57.561 40.909 0.00 0.00 39.80 5.01
4851 5695 3.119884 TCAAGTTCAATATGCTTGGTGCG 60.120 43.478 0.00 0.00 46.63 5.34
4852 5696 1.133025 AGTTCAATATGCTTGGTGCGC 59.867 47.619 0.00 0.00 46.63 6.09
4853 5697 1.133025 GTTCAATATGCTTGGTGCGCT 59.867 47.619 9.73 0.00 46.63 5.92
4854 5698 1.462616 TCAATATGCTTGGTGCGCTT 58.537 45.000 9.73 0.00 46.63 4.68
4855 5699 2.637947 TCAATATGCTTGGTGCGCTTA 58.362 42.857 9.73 0.00 46.63 3.09
4856 5700 3.213506 TCAATATGCTTGGTGCGCTTAT 58.786 40.909 9.73 0.00 46.63 1.73
4857 5701 3.003585 TCAATATGCTTGGTGCGCTTATG 59.996 43.478 9.73 0.00 46.63 1.90
4858 5702 0.662619 TATGCTTGGTGCGCTTATGC 59.337 50.000 9.73 9.27 46.63 3.14
4859 5703 1.033746 ATGCTTGGTGCGCTTATGCT 61.034 50.000 9.73 0.00 46.63 3.79
4860 5704 0.392327 TGCTTGGTGCGCTTATGCTA 60.392 50.000 9.73 0.00 46.63 3.49
4861 5705 0.028110 GCTTGGTGCGCTTATGCTAC 59.972 55.000 9.73 0.00 36.97 3.58
4862 5706 1.368641 CTTGGTGCGCTTATGCTACA 58.631 50.000 9.73 0.00 36.97 2.74
4863 5707 1.062587 CTTGGTGCGCTTATGCTACAC 59.937 52.381 9.73 12.45 40.71 2.90
4865 5709 1.636340 GTGCGCTTATGCTACACCG 59.364 57.895 9.73 0.00 37.70 4.94
4866 5710 1.520564 TGCGCTTATGCTACACCGG 60.521 57.895 9.73 0.00 36.97 5.28
4867 5711 1.227147 GCGCTTATGCTACACCGGA 60.227 57.895 9.46 0.00 36.97 5.14
4868 5712 1.488261 GCGCTTATGCTACACCGGAC 61.488 60.000 9.46 0.00 36.97 4.79
4869 5713 0.102481 CGCTTATGCTACACCGGACT 59.898 55.000 9.46 0.00 36.97 3.85
4870 5714 1.571919 GCTTATGCTACACCGGACTG 58.428 55.000 9.46 0.00 36.03 3.51
4871 5715 1.806623 GCTTATGCTACACCGGACTGG 60.807 57.143 9.46 0.00 39.07 4.00
4872 5716 0.177141 TTATGCTACACCGGACTGGC 59.823 55.000 9.46 6.48 43.94 4.85
4873 5717 1.682451 TATGCTACACCGGACTGGCC 61.682 60.000 9.46 0.00 43.94 5.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 8.592105 ATTTTGTTCCACACTATGACAAAATG 57.408 30.769 18.90 0.00 45.19 2.32
46 47 1.474077 CAAAAGGATCTTCGCCAAGGG 59.526 52.381 0.00 0.00 0.00 3.95
59 60 6.377712 GGTAGCTACTTCTAGACTCAAAAGGA 59.622 42.308 22.74 0.00 0.00 3.36
61 62 7.159322 TGGTAGCTACTTCTAGACTCAAAAG 57.841 40.000 22.74 0.00 0.00 2.27
72 73 2.157738 ACGACGTTGGTAGCTACTTCT 58.842 47.619 22.74 2.23 0.00 2.85
88 89 2.007608 GCCCTCAAGGTCAATAACGAC 58.992 52.381 0.00 0.00 38.26 4.34
111 112 1.798813 GGTGCGAGGTTTGTCTTAGTG 59.201 52.381 0.00 0.00 0.00 2.74
140 141 2.981400 ATGCGTTTTCGGTTAACTGG 57.019 45.000 14.44 2.93 44.29 4.00
188 189 2.224066 CGCCCTAGATAAAGTCAGGTGG 60.224 54.545 0.00 0.00 0.00 4.61
203 204 1.213537 CGACTCCGAAAACGCCCTA 59.786 57.895 0.00 0.00 38.22 3.53
216 217 6.404712 ACGGAGTCATTTTTAAATCGACTC 57.595 37.500 22.09 22.09 43.39 3.36
226 227 6.451064 AAAGAGTTGAACGGAGTCATTTTT 57.549 33.333 0.00 0.00 45.00 1.94
227 228 5.008712 GGAAAGAGTTGAACGGAGTCATTTT 59.991 40.000 0.00 0.00 45.00 1.82
238 239 2.031944 GCTTCACCGGAAAGAGTTGAAC 60.032 50.000 20.63 5.83 31.35 3.18
268 269 4.159693 ACTTGTCATGCTCTATGAACCGTA 59.840 41.667 0.00 0.00 46.85 4.02
382 384 2.823984 ACATCACGTTACGACAACCAA 58.176 42.857 13.03 0.00 0.00 3.67
405 407 3.683365 TCCCCACTTAAACTCCGTTAC 57.317 47.619 0.00 0.00 0.00 2.50
415 417 3.696045 CACATTGTCCATCCCCACTTAA 58.304 45.455 0.00 0.00 0.00 1.85
424 426 4.171005 CAATCACTTGCACATTGTCCATC 58.829 43.478 0.00 0.00 0.00 3.51
497 499 0.997196 GAACCACTTCGATACGGCAC 59.003 55.000 0.00 0.00 0.00 5.01
539 554 6.064717 GGTCTCCTAGGACAATGCATAAATT 58.935 40.000 7.62 0.00 37.91 1.82
540 555 5.132648 TGGTCTCCTAGGACAATGCATAAAT 59.867 40.000 7.62 0.00 37.91 1.40
541 556 4.473196 TGGTCTCCTAGGACAATGCATAAA 59.527 41.667 7.62 0.00 37.91 1.40
542 557 4.037222 TGGTCTCCTAGGACAATGCATAA 58.963 43.478 7.62 0.00 37.91 1.90
570 585 5.069648 AGCTAGCTAATCATGAGCAACACTA 59.930 40.000 17.69 0.00 42.69 2.74
571 586 4.125703 GCTAGCTAATCATGAGCAACACT 58.874 43.478 7.70 0.00 42.69 3.55
572 587 4.125703 AGCTAGCTAATCATGAGCAACAC 58.874 43.478 17.69 0.00 42.69 3.32
573 588 4.412796 AGCTAGCTAATCATGAGCAACA 57.587 40.909 17.69 0.00 42.69 3.33
588 603 2.968675 TCGAACAAAACCCTAGCTAGC 58.031 47.619 15.74 6.62 0.00 3.42
589 604 4.755411 TCATCGAACAAAACCCTAGCTAG 58.245 43.478 14.20 14.20 0.00 3.42
628 643 5.447279 CGAGGTTTCCCAAAATAGAATCACG 60.447 44.000 0.00 0.00 0.00 4.35
657 681 6.060028 TGCTTTAATGATCGCAACTAATCC 57.940 37.500 0.00 0.00 0.00 3.01
710 738 7.589954 AGATTAGATGCAACGTGTTTTGTTTAC 59.410 33.333 0.00 0.00 0.00 2.01
712 740 6.503524 AGATTAGATGCAACGTGTTTTGTTT 58.496 32.000 0.00 0.00 0.00 2.83
713 741 6.072112 AGATTAGATGCAACGTGTTTTGTT 57.928 33.333 0.00 0.00 0.00 2.83
715 743 9.767684 TTATTAGATTAGATGCAACGTGTTTTG 57.232 29.630 0.00 0.00 0.00 2.44
795 827 1.203137 TGAAGGAAGGAAGGTCGAGGA 60.203 52.381 0.00 0.00 0.00 3.71
844 886 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
845 887 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
846 888 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
847 889 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
848 890 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
849 891 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
850 892 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
851 893 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
852 894 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
853 895 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
854 896 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
855 897 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
856 898 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
857 899 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
858 900 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
859 901 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
860 902 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
861 903 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
862 904 5.867903 AAGAGAGAGAGAGAGAGAGAGAG 57.132 47.826 0.00 0.00 0.00 3.20
863 905 6.495181 GGATAAGAGAGAGAGAGAGAGAGAGA 59.505 46.154 0.00 0.00 0.00 3.10
864 906 6.268617 TGGATAAGAGAGAGAGAGAGAGAGAG 59.731 46.154 0.00 0.00 0.00 3.20
865 907 6.143206 TGGATAAGAGAGAGAGAGAGAGAGA 58.857 44.000 0.00 0.00 0.00 3.10
866 908 6.425210 TGGATAAGAGAGAGAGAGAGAGAG 57.575 45.833 0.00 0.00 0.00 3.20
867 909 6.409234 GGTTGGATAAGAGAGAGAGAGAGAGA 60.409 46.154 0.00 0.00 0.00 3.10
868 910 5.765182 GGTTGGATAAGAGAGAGAGAGAGAG 59.235 48.000 0.00 0.00 0.00 3.20
869 911 5.431731 AGGTTGGATAAGAGAGAGAGAGAGA 59.568 44.000 0.00 0.00 0.00 3.10
870 912 5.694995 AGGTTGGATAAGAGAGAGAGAGAG 58.305 45.833 0.00 0.00 0.00 3.20
871 913 5.725551 AGGTTGGATAAGAGAGAGAGAGA 57.274 43.478 0.00 0.00 0.00 3.10
874 916 5.584251 GCAAAAGGTTGGATAAGAGAGAGAG 59.416 44.000 0.00 0.00 35.10 3.20
902 944 4.229639 AGATCTCCATAGGCTCATTGTCA 58.770 43.478 0.00 0.00 0.00 3.58
1044 1114 4.370094 TTCAATTGGTTTACCGTACCCT 57.630 40.909 5.42 0.00 39.43 4.34
1073 1147 4.725556 TTCATTCTTCACAAGTACGTGC 57.274 40.909 8.83 0.00 36.80 5.34
1077 1151 9.132521 CCAAATTCATTCATTCTTCACAAGTAC 57.867 33.333 0.00 0.00 0.00 2.73
1081 1155 6.862608 CGACCAAATTCATTCATTCTTCACAA 59.137 34.615 0.00 0.00 0.00 3.33
1088 1162 5.258622 CGACTCGACCAAATTCATTCATTC 58.741 41.667 0.00 0.00 0.00 2.67
1089 1163 4.094887 CCGACTCGACCAAATTCATTCATT 59.905 41.667 0.00 0.00 0.00 2.57
1090 1164 3.623060 CCGACTCGACCAAATTCATTCAT 59.377 43.478 0.00 0.00 0.00 2.57
1112 1186 3.057526 GCCTTATTAATTGGATCACCGGC 60.058 47.826 0.00 0.00 39.42 6.13
1113 1187 4.141287 TGCCTTATTAATTGGATCACCGG 58.859 43.478 0.00 0.00 39.42 5.28
1137 1219 9.368533 CATGCATTCCATCAAGCAATTAATGCC 62.369 40.741 12.89 0.00 43.88 4.40
1138 1220 6.565811 CATGCATTCCATCAAGCAATTAATGC 60.566 38.462 0.00 9.53 43.45 3.56
1140 1222 5.468746 GCATGCATTCCATCAAGCAATTAAT 59.531 36.000 14.21 0.00 40.76 1.40
1141 1223 4.812091 GCATGCATTCCATCAAGCAATTAA 59.188 37.500 14.21 0.00 40.76 1.40
1142 1224 4.141914 TGCATGCATTCCATCAAGCAATTA 60.142 37.500 18.46 0.00 40.76 1.40
1150 1232 4.681074 AATTCATGCATGCATTCCATCA 57.319 36.364 30.32 11.00 33.90 3.07
1151 1233 4.213270 CCAAATTCATGCATGCATTCCATC 59.787 41.667 30.32 0.00 33.90 3.51
1152 1234 4.133820 CCAAATTCATGCATGCATTCCAT 58.866 39.130 30.32 18.41 33.90 3.41
1153 1235 3.055021 ACCAAATTCATGCATGCATTCCA 60.055 39.130 30.32 16.98 33.90 3.53
1154 1236 3.311322 CACCAAATTCATGCATGCATTCC 59.689 43.478 30.32 0.00 33.90 3.01
1156 1238 2.680841 GCACCAAATTCATGCATGCATT 59.319 40.909 30.32 19.64 39.23 3.56
1165 1247 2.307496 TGTCCCTGCACCAAATTCAT 57.693 45.000 0.00 0.00 0.00 2.57
1166 1248 1.894466 CATGTCCCTGCACCAAATTCA 59.106 47.619 0.00 0.00 0.00 2.57
1380 1462 9.823647 GAGTAATGCATGCACCTAATACTATAT 57.176 33.333 25.37 0.00 0.00 0.86
1381 1463 9.035890 AGAGTAATGCATGCACCTAATACTATA 57.964 33.333 25.37 0.00 0.00 1.31
1382 1464 7.911651 AGAGTAATGCATGCACCTAATACTAT 58.088 34.615 25.37 18.60 0.00 2.12
1383 1465 7.303182 AGAGTAATGCATGCACCTAATACTA 57.697 36.000 25.37 0.00 0.00 1.82
1384 1466 6.179906 AGAGTAATGCATGCACCTAATACT 57.820 37.500 25.37 22.99 0.00 2.12
1385 1467 6.867662 AAGAGTAATGCATGCACCTAATAC 57.132 37.500 25.37 19.13 0.00 1.89
1568 2147 8.471609 ACACATGCATGAGATCAATCAAATTAA 58.528 29.630 32.75 0.00 31.76 1.40
1658 2262 7.616528 ATTATTTTAGACATTGGGATTGGGG 57.383 36.000 0.00 0.00 0.00 4.96
1683 2287 7.868415 GCGTTTAGATCACTTTAGTAGGATCAT 59.132 37.037 10.86 0.00 38.84 2.45
1684 2288 7.068348 AGCGTTTAGATCACTTTAGTAGGATCA 59.932 37.037 10.86 0.00 38.84 2.92
1685 2289 7.427214 AGCGTTTAGATCACTTTAGTAGGATC 58.573 38.462 0.00 0.00 37.11 3.36
1686 2290 7.285858 AGAGCGTTTAGATCACTTTAGTAGGAT 59.714 37.037 0.00 0.00 37.82 3.24
1687 2291 6.602406 AGAGCGTTTAGATCACTTTAGTAGGA 59.398 38.462 0.00 0.00 37.82 2.94
1688 2292 6.797454 AGAGCGTTTAGATCACTTTAGTAGG 58.203 40.000 0.00 0.00 37.82 3.18
1689 2293 9.953697 ATAAGAGCGTTTAGATCACTTTAGTAG 57.046 33.333 0.00 0.00 37.82 2.57
1701 2305 9.669353 CCGTAAACTAATATAAGAGCGTTTAGA 57.331 33.333 0.00 0.00 30.36 2.10
1702 2306 9.669353 TCCGTAAACTAATATAAGAGCGTTTAG 57.331 33.333 0.00 0.00 30.36 1.85
1703 2307 9.669353 CTCCGTAAACTAATATAAGAGCGTTTA 57.331 33.333 0.00 0.00 0.00 2.01
1704 2308 7.650903 CCTCCGTAAACTAATATAAGAGCGTTT 59.349 37.037 0.00 0.00 0.00 3.60
1705 2309 7.144000 CCTCCGTAAACTAATATAAGAGCGTT 58.856 38.462 0.00 0.00 0.00 4.84
1706 2310 6.294397 CCCTCCGTAAACTAATATAAGAGCGT 60.294 42.308 0.00 0.00 0.00 5.07
1707 2311 6.072286 TCCCTCCGTAAACTAATATAAGAGCG 60.072 42.308 0.00 0.00 0.00 5.03
1708 2312 7.039853 ACTCCCTCCGTAAACTAATATAAGAGC 60.040 40.741 0.00 0.00 0.00 4.09
1709 2313 8.406730 ACTCCCTCCGTAAACTAATATAAGAG 57.593 38.462 0.00 0.00 0.00 2.85
1710 2314 9.289782 GTACTCCCTCCGTAAACTAATATAAGA 57.710 37.037 0.00 0.00 0.00 2.10
1711 2315 9.294614 AGTACTCCCTCCGTAAACTAATATAAG 57.705 37.037 0.00 0.00 0.00 1.73
1719 2323 8.052141 GGATATATAGTACTCCCTCCGTAAACT 58.948 40.741 0.00 0.00 0.00 2.66
1720 2324 7.831193 TGGATATATAGTACTCCCTCCGTAAAC 59.169 40.741 0.00 0.00 0.00 2.01
1721 2325 7.932134 TGGATATATAGTACTCCCTCCGTAAA 58.068 38.462 0.00 0.00 0.00 2.01
1722 2326 7.515004 TGGATATATAGTACTCCCTCCGTAA 57.485 40.000 0.00 0.00 0.00 3.18
1723 2327 7.702807 ATGGATATATAGTACTCCCTCCGTA 57.297 40.000 0.00 0.00 0.00 4.02
1890 2611 6.704056 AGGTTCAAATCTCTCTCCCTTTAA 57.296 37.500 0.00 0.00 0.00 1.52
1895 2616 5.685520 AGTTAGGTTCAAATCTCTCTCCC 57.314 43.478 0.00 0.00 0.00 4.30
1903 2624 8.074370 GTCCAGTTTGTTAGTTAGGTTCAAATC 58.926 37.037 0.00 0.00 32.16 2.17
1911 2632 6.485313 TGTTCATGTCCAGTTTGTTAGTTAGG 59.515 38.462 0.00 0.00 0.00 2.69
1917 2638 6.714356 TCATCATGTTCATGTCCAGTTTGTTA 59.286 34.615 11.73 0.00 0.00 2.41
1921 2642 5.947566 TGATCATCATGTTCATGTCCAGTTT 59.052 36.000 11.73 0.00 0.00 2.66
1922 2643 5.356190 GTGATCATCATGTTCATGTCCAGTT 59.644 40.000 11.73 0.00 29.93 3.16
1924 2645 4.879545 TGTGATCATCATGTTCATGTCCAG 59.120 41.667 11.73 2.74 29.93 3.86
1925 2646 4.637091 GTGTGATCATCATGTTCATGTCCA 59.363 41.667 11.73 0.00 29.93 4.02
1927 2648 6.432607 AAGTGTGATCATCATGTTCATGTC 57.567 37.500 11.73 4.08 29.93 3.06
1929 2650 9.285770 CTTTTAAGTGTGATCATCATGTTCATG 57.714 33.333 0.00 6.46 29.93 3.07
1930 2651 7.972277 GCTTTTAAGTGTGATCATCATGTTCAT 59.028 33.333 0.00 0.00 29.93 2.57
1932 2653 7.533426 AGCTTTTAAGTGTGATCATCATGTTC 58.467 34.615 0.00 0.00 0.00 3.18
1933 2654 7.392673 AGAGCTTTTAAGTGTGATCATCATGTT 59.607 33.333 0.00 0.87 0.00 2.71
2054 2776 6.205784 CCGTTATTTTTCTTTTCTCTGTGCA 58.794 36.000 0.00 0.00 0.00 4.57
2359 3081 2.427540 GATGATGGCGAGGACGAGGG 62.428 65.000 0.00 0.00 42.66 4.30
2523 3257 3.861840 TGCTGCTGTAGTTGTAGATTCC 58.138 45.455 0.00 0.00 0.00 3.01
2527 3261 2.231478 GTCCTGCTGCTGTAGTTGTAGA 59.769 50.000 7.84 0.00 0.00 2.59
2533 3267 1.674057 GGTGTCCTGCTGCTGTAGT 59.326 57.895 7.84 0.00 0.00 2.73
2534 3268 1.446792 CGGTGTCCTGCTGCTGTAG 60.447 63.158 0.00 1.57 0.00 2.74
2535 3269 1.257750 ATCGGTGTCCTGCTGCTGTA 61.258 55.000 0.00 0.00 0.00 2.74
2536 3270 2.587247 ATCGGTGTCCTGCTGCTGT 61.587 57.895 0.00 0.00 0.00 4.40
2545 3279 2.588877 CCATCGCCATCGGTGTCC 60.589 66.667 0.00 0.00 44.90 4.02
2546 3280 3.272334 GCCATCGCCATCGGTGTC 61.272 66.667 0.00 0.00 44.90 3.67
2555 3289 4.292178 CTCCTCCTCGCCATCGCC 62.292 72.222 0.00 0.00 35.26 5.54
2579 3313 2.202987 CATCTGCGTGGGAGCCTC 60.203 66.667 0.00 0.00 36.02 4.70
2583 3317 1.145598 ATCTGCATCTGCGTGGGAG 59.854 57.895 0.00 0.00 45.83 4.30
2584 3318 1.153309 CATCTGCATCTGCGTGGGA 60.153 57.895 0.00 0.00 45.83 4.37
2586 3320 2.713770 GCATCTGCATCTGCGTGG 59.286 61.111 5.04 0.00 45.83 4.94
2614 3378 2.293677 CAGGGTGTCGCTGTACCTATAG 59.706 54.545 5.80 0.00 39.17 1.31
2839 3603 1.337071 TCGTAGAAGCCGATGATGACC 59.663 52.381 0.00 0.00 0.00 4.02
3040 3804 1.756375 CGAGCATAACACGGAGCAGC 61.756 60.000 0.00 0.00 0.00 5.25
3085 3849 2.596631 AGTGTGGCAAGCAGCTGG 60.597 61.111 17.12 0.00 44.79 4.85
3107 3871 2.103143 CGCGTGTGAGGCTAGGAG 59.897 66.667 0.00 0.00 0.00 3.69
3514 4282 5.011738 TGCATGGAATTAGGTAGTAGGTAGC 59.988 44.000 0.00 0.00 0.00 3.58
3515 4283 6.665992 TGCATGGAATTAGGTAGTAGGTAG 57.334 41.667 0.00 0.00 0.00 3.18
3516 4284 6.520061 GCATGCATGGAATTAGGTAGTAGGTA 60.520 42.308 27.34 0.00 0.00 3.08
3517 4285 5.746065 GCATGCATGGAATTAGGTAGTAGGT 60.746 44.000 27.34 0.00 0.00 3.08
3582 4413 9.777297 ACACACACATGCATATAGTTCATATTA 57.223 29.630 0.00 0.00 0.00 0.98
3583 4414 8.681486 ACACACACATGCATATAGTTCATATT 57.319 30.769 0.00 0.00 0.00 1.28
3584 4415 9.428097 CTACACACACATGCATATAGTTCATAT 57.572 33.333 0.00 0.00 0.00 1.78
3585 4416 7.384932 GCTACACACACATGCATATAGTTCATA 59.615 37.037 0.00 0.00 0.00 2.15
3600 4431 4.929211 GTGATTGTAGATGCTACACACACA 59.071 41.667 23.03 13.23 35.66 3.72
3935 4767 0.669077 ACGACACCCATCTAGCGATC 59.331 55.000 0.00 0.00 0.00 3.69
4128 4972 0.032130 GCCACTCTTGTCGTGTCTCA 59.968 55.000 0.00 0.00 0.00 3.27
4134 4978 2.607187 CGATTTAGCCACTCTTGTCGT 58.393 47.619 0.00 0.00 0.00 4.34
4137 4981 2.028112 TCTGCGATTTAGCCACTCTTGT 60.028 45.455 0.00 0.00 36.02 3.16
4138 4982 2.349886 GTCTGCGATTTAGCCACTCTTG 59.650 50.000 0.00 0.00 36.02 3.02
4139 4983 2.234908 AGTCTGCGATTTAGCCACTCTT 59.765 45.455 0.00 0.00 36.02 2.85
4140 4984 1.827969 AGTCTGCGATTTAGCCACTCT 59.172 47.619 0.00 0.00 36.02 3.24
4141 4985 2.301577 AGTCTGCGATTTAGCCACTC 57.698 50.000 0.00 0.00 36.02 3.51
4142 4986 3.430929 CCTTAGTCTGCGATTTAGCCACT 60.431 47.826 0.00 0.00 34.74 4.00
4143 4987 2.866762 CCTTAGTCTGCGATTTAGCCAC 59.133 50.000 0.00 0.00 36.02 5.01
4144 4988 2.741878 GCCTTAGTCTGCGATTTAGCCA 60.742 50.000 0.00 0.00 36.02 4.75
4145 4989 1.867865 GCCTTAGTCTGCGATTTAGCC 59.132 52.381 0.00 0.00 36.02 3.93
4146 4990 2.550978 TGCCTTAGTCTGCGATTTAGC 58.449 47.619 0.00 0.00 37.71 3.09
4147 4991 4.387256 GCTATGCCTTAGTCTGCGATTTAG 59.613 45.833 0.00 0.00 0.00 1.85
4148 4992 4.307432 GCTATGCCTTAGTCTGCGATTTA 58.693 43.478 0.00 0.00 0.00 1.40
4149 4993 3.134458 GCTATGCCTTAGTCTGCGATTT 58.866 45.455 0.00 0.00 0.00 2.17
4150 4994 2.548920 GGCTATGCCTTAGTCTGCGATT 60.549 50.000 0.73 0.00 46.69 3.34
4151 4995 1.001406 GGCTATGCCTTAGTCTGCGAT 59.999 52.381 0.73 0.00 46.69 4.58
4152 4996 0.389391 GGCTATGCCTTAGTCTGCGA 59.611 55.000 0.73 0.00 46.69 5.10
4153 4997 2.906047 GGCTATGCCTTAGTCTGCG 58.094 57.895 0.73 0.00 46.69 5.18
4164 5008 2.300437 CCTTCCCACTACTAGGCTATGC 59.700 54.545 0.00 0.00 0.00 3.14
4165 5009 2.900546 CCCTTCCCACTACTAGGCTATG 59.099 54.545 0.00 0.00 0.00 2.23
4166 5010 2.158143 CCCCTTCCCACTACTAGGCTAT 60.158 54.545 0.00 0.00 0.00 2.97
4167 5011 1.219724 CCCCTTCCCACTACTAGGCTA 59.780 57.143 0.00 0.00 0.00 3.93
4168 5012 0.031010 CCCCTTCCCACTACTAGGCT 60.031 60.000 0.00 0.00 0.00 4.58
4169 5013 1.697082 GCCCCTTCCCACTACTAGGC 61.697 65.000 0.00 0.00 0.00 3.93
4170 5014 0.031010 AGCCCCTTCCCACTACTAGG 60.031 60.000 0.00 0.00 0.00 3.02
4171 5015 1.123928 CAGCCCCTTCCCACTACTAG 58.876 60.000 0.00 0.00 0.00 2.57
4172 5016 0.714180 TCAGCCCCTTCCCACTACTA 59.286 55.000 0.00 0.00 0.00 1.82
4173 5017 0.044855 ATCAGCCCCTTCCCACTACT 59.955 55.000 0.00 0.00 0.00 2.57
4174 5018 0.181350 CATCAGCCCCTTCCCACTAC 59.819 60.000 0.00 0.00 0.00 2.73
4175 5019 1.635817 GCATCAGCCCCTTCCCACTA 61.636 60.000 0.00 0.00 33.58 2.74
4176 5020 2.988839 GCATCAGCCCCTTCCCACT 61.989 63.158 0.00 0.00 33.58 4.00
4177 5021 2.440980 GCATCAGCCCCTTCCCAC 60.441 66.667 0.00 0.00 33.58 4.61
4187 5031 2.440980 GGGTGGGAAGGCATCAGC 60.441 66.667 0.00 0.00 41.10 4.26
4188 5032 1.379044 GTGGGTGGGAAGGCATCAG 60.379 63.158 0.00 0.00 0.00 2.90
4189 5033 2.763215 GTGGGTGGGAAGGCATCA 59.237 61.111 0.00 0.00 0.00 3.07
4190 5034 2.043953 GGTGGGTGGGAAGGCATC 60.044 66.667 0.00 0.00 0.00 3.91
4191 5035 3.672503 GGGTGGGTGGGAAGGCAT 61.673 66.667 0.00 0.00 0.00 4.40
4193 5037 4.366684 CTGGGTGGGTGGGAAGGC 62.367 72.222 0.00 0.00 0.00 4.35
4194 5038 3.661648 CCTGGGTGGGTGGGAAGG 61.662 72.222 0.00 0.00 0.00 3.46
4195 5039 2.426305 GAACCTGGGTGGGTGGGAAG 62.426 65.000 0.00 0.00 39.85 3.46
4196 5040 2.370403 AACCTGGGTGGGTGGGAA 60.370 61.111 0.00 0.00 39.85 3.97
4197 5041 2.856988 GAACCTGGGTGGGTGGGA 60.857 66.667 0.00 0.00 39.85 4.37
4198 5042 2.713531 CTTGAACCTGGGTGGGTGGG 62.714 65.000 0.00 0.00 39.85 4.61
4199 5043 1.228552 CTTGAACCTGGGTGGGTGG 60.229 63.158 0.00 0.00 39.85 4.61
4200 5044 1.228552 CCTTGAACCTGGGTGGGTG 60.229 63.158 0.00 0.00 39.85 4.61
4201 5045 3.146828 GCCTTGAACCTGGGTGGGT 62.147 63.158 0.00 0.00 42.05 4.51
4202 5046 2.283173 GCCTTGAACCTGGGTGGG 60.283 66.667 0.00 0.00 41.11 4.61
4203 5047 1.077265 ATGCCTTGAACCTGGGTGG 59.923 57.895 0.00 0.00 42.93 4.61
4204 5048 1.252904 CCATGCCTTGAACCTGGGTG 61.253 60.000 0.00 0.00 0.00 4.61
4205 5049 1.077265 CCATGCCTTGAACCTGGGT 59.923 57.895 0.00 0.00 0.00 4.51
4206 5050 0.331278 TACCATGCCTTGAACCTGGG 59.669 55.000 0.00 0.00 0.00 4.45
4207 5051 1.004745 AGTACCATGCCTTGAACCTGG 59.995 52.381 0.00 0.00 0.00 4.45
4208 5052 2.496899 AGTACCATGCCTTGAACCTG 57.503 50.000 0.00 0.00 0.00 4.00
4209 5053 3.329520 TGTAAGTACCATGCCTTGAACCT 59.670 43.478 0.00 0.00 0.00 3.50
4210 5054 3.681593 TGTAAGTACCATGCCTTGAACC 58.318 45.455 0.00 0.00 0.00 3.62
4211 5055 5.897377 ATTGTAAGTACCATGCCTTGAAC 57.103 39.130 0.00 0.00 0.00 3.18
4212 5056 6.295011 CCAAATTGTAAGTACCATGCCTTGAA 60.295 38.462 0.00 0.00 0.00 2.69
4213 5057 5.184864 CCAAATTGTAAGTACCATGCCTTGA 59.815 40.000 0.00 0.00 0.00 3.02
4214 5058 5.410067 CCAAATTGTAAGTACCATGCCTTG 58.590 41.667 0.00 0.00 0.00 3.61
4215 5059 4.466015 CCCAAATTGTAAGTACCATGCCTT 59.534 41.667 0.00 0.00 0.00 4.35
4216 5060 4.023291 CCCAAATTGTAAGTACCATGCCT 58.977 43.478 0.00 0.00 0.00 4.75
4217 5061 3.767131 ACCCAAATTGTAAGTACCATGCC 59.233 43.478 0.00 0.00 0.00 4.40
4218 5062 5.400066 AACCCAAATTGTAAGTACCATGC 57.600 39.130 0.00 0.00 0.00 4.06
4219 5063 6.754193 ACAAACCCAAATTGTAAGTACCATG 58.246 36.000 0.00 0.00 39.14 3.66
4220 5064 6.987403 ACAAACCCAAATTGTAAGTACCAT 57.013 33.333 0.00 0.00 39.14 3.55
4221 5065 6.574350 CAACAAACCCAAATTGTAAGTACCA 58.426 36.000 0.00 0.00 39.98 3.25
4222 5066 5.464057 GCAACAAACCCAAATTGTAAGTACC 59.536 40.000 0.00 0.00 39.98 3.34
4223 5067 6.019398 GTGCAACAAACCCAAATTGTAAGTAC 60.019 38.462 0.00 0.00 39.98 2.73
4224 5068 6.043411 GTGCAACAAACCCAAATTGTAAGTA 58.957 36.000 0.00 0.00 39.98 2.24
4225 5069 4.873259 GTGCAACAAACCCAAATTGTAAGT 59.127 37.500 0.00 0.00 39.98 2.24
4226 5070 4.272261 GGTGCAACAAACCCAAATTGTAAG 59.728 41.667 0.00 0.00 39.98 2.34
4227 5071 4.192317 GGTGCAACAAACCCAAATTGTAA 58.808 39.130 0.00 0.00 39.98 2.41
4228 5072 3.197766 TGGTGCAACAAACCCAAATTGTA 59.802 39.130 0.00 0.00 39.98 2.41
4229 5073 2.026822 TGGTGCAACAAACCCAAATTGT 60.027 40.909 0.00 0.00 42.56 2.71
4230 5074 2.636830 TGGTGCAACAAACCCAAATTG 58.363 42.857 0.00 0.00 39.98 2.32
4231 5075 3.356529 TTGGTGCAACAAACCCAAATT 57.643 38.095 16.46 0.00 39.98 1.82
4232 5076 3.574354 ATTGGTGCAACAAACCCAAAT 57.426 38.095 23.14 0.00 40.16 2.32
4233 5077 3.356529 AATTGGTGCAACAAACCCAAA 57.643 38.095 23.14 0.00 40.16 3.28
4234 5078 4.696479 ATAATTGGTGCAACAAACCCAA 57.304 36.364 23.14 14.03 39.98 4.12
4235 5079 6.169094 CAATATAATTGGTGCAACAAACCCA 58.831 36.000 23.14 7.96 39.98 4.51
4236 5080 6.169800 ACAATATAATTGGTGCAACAAACCC 58.830 36.000 23.14 0.66 39.98 4.11
4237 5081 7.491048 CCTACAATATAATTGGTGCAACAAACC 59.509 37.037 23.14 1.54 39.98 3.27
4238 5082 7.491048 CCCTACAATATAATTGGTGCAACAAAC 59.509 37.037 23.14 0.00 39.98 2.93
4239 5083 7.364232 CCCCTACAATATAATTGGTGCAACAAA 60.364 37.037 23.14 6.25 39.98 2.83
4240 5084 6.097554 CCCCTACAATATAATTGGTGCAACAA 59.902 38.462 21.46 21.46 39.98 2.83
4241 5085 5.596361 CCCCTACAATATAATTGGTGCAACA 59.404 40.000 0.00 0.00 39.98 3.33
4242 5086 5.010617 CCCCCTACAATATAATTGGTGCAAC 59.989 44.000 0.00 0.00 0.00 4.17
4243 5087 5.144100 CCCCCTACAATATAATTGGTGCAA 58.856 41.667 4.78 0.00 0.00 4.08
4244 5088 4.169068 ACCCCCTACAATATAATTGGTGCA 59.831 41.667 4.78 0.00 0.00 4.57
4245 5089 4.736473 ACCCCCTACAATATAATTGGTGC 58.264 43.478 4.78 0.00 0.00 5.01
4246 5090 5.321927 GGACCCCCTACAATATAATTGGTG 58.678 45.833 4.78 0.00 0.00 4.17
4247 5091 4.355889 GGGACCCCCTACAATATAATTGGT 59.644 45.833 0.00 0.00 41.34 3.67
4248 5092 4.930696 GGGACCCCCTACAATATAATTGG 58.069 47.826 0.00 0.00 41.34 3.16
4262 5106 1.281287 GAAAGACTGTAAGGGACCCCC 59.719 57.143 7.00 0.00 45.90 5.40
4263 5107 2.027100 CAGAAAGACTGTAAGGGACCCC 60.027 54.545 7.00 1.17 41.30 4.95
4264 5108 3.336138 CAGAAAGACTGTAAGGGACCC 57.664 52.381 0.59 0.59 41.30 4.46
4544 5388 7.548967 TCGTGTATATATTGTGACAAACTCCA 58.451 34.615 0.62 0.00 0.00 3.86
4551 5395 8.166422 AGACATCTCGTGTATATATTGTGACA 57.834 34.615 0.00 0.00 42.36 3.58
4699 5543 3.564027 CTTTCCATCGCCGACGCC 61.564 66.667 0.00 0.00 39.84 5.68
4700 5544 1.429148 ATTCTTTCCATCGCCGACGC 61.429 55.000 0.00 0.00 39.84 5.19
4701 5545 1.006832 AATTCTTTCCATCGCCGACG 58.993 50.000 0.00 0.00 42.01 5.12
4702 5546 1.531883 GCAATTCTTTCCATCGCCGAC 60.532 52.381 0.00 0.00 0.00 4.79
4703 5547 0.732571 GCAATTCTTTCCATCGCCGA 59.267 50.000 0.00 0.00 0.00 5.54
4704 5548 0.451383 TGCAATTCTTTCCATCGCCG 59.549 50.000 0.00 0.00 0.00 6.46
4705 5549 1.800286 GCTGCAATTCTTTCCATCGCC 60.800 52.381 0.00 0.00 0.00 5.54
4706 5550 1.553308 GCTGCAATTCTTTCCATCGC 58.447 50.000 0.00 0.00 0.00 4.58
4707 5551 1.532505 CCGCTGCAATTCTTTCCATCG 60.533 52.381 0.00 0.00 0.00 3.84
4708 5552 1.474077 ACCGCTGCAATTCTTTCCATC 59.526 47.619 0.00 0.00 0.00 3.51
4709 5553 1.549203 ACCGCTGCAATTCTTTCCAT 58.451 45.000 0.00 0.00 0.00 3.41
4710 5554 1.000385 CAACCGCTGCAATTCTTTCCA 60.000 47.619 0.00 0.00 0.00 3.53
4711 5555 1.669795 CCAACCGCTGCAATTCTTTCC 60.670 52.381 0.00 0.00 0.00 3.13
4712 5556 1.269448 TCCAACCGCTGCAATTCTTTC 59.731 47.619 0.00 0.00 0.00 2.62
4713 5557 1.327303 TCCAACCGCTGCAATTCTTT 58.673 45.000 0.00 0.00 0.00 2.52
4714 5558 1.270550 CTTCCAACCGCTGCAATTCTT 59.729 47.619 0.00 0.00 0.00 2.52
4715 5559 0.883833 CTTCCAACCGCTGCAATTCT 59.116 50.000 0.00 0.00 0.00 2.40
4716 5560 0.733909 GCTTCCAACCGCTGCAATTC 60.734 55.000 0.00 0.00 0.00 2.17
4717 5561 1.290009 GCTTCCAACCGCTGCAATT 59.710 52.632 0.00 0.00 0.00 2.32
4718 5562 2.639327 GGCTTCCAACCGCTGCAAT 61.639 57.895 0.00 0.00 0.00 3.56
4719 5563 3.294493 GGCTTCCAACCGCTGCAA 61.294 61.111 0.00 0.00 0.00 4.08
4722 5566 1.903404 AAAGGGCTTCCAACCGCTG 60.903 57.895 0.00 0.00 0.00 5.18
4723 5567 1.903404 CAAAGGGCTTCCAACCGCT 60.903 57.895 0.00 0.00 0.00 5.52
4724 5568 2.650778 CAAAGGGCTTCCAACCGC 59.349 61.111 0.00 0.00 0.00 5.68
4725 5569 1.524008 GACCAAAGGGCTTCCAACCG 61.524 60.000 0.00 0.00 37.90 4.44
4726 5570 0.469144 TGACCAAAGGGCTTCCAACC 60.469 55.000 0.00 0.00 37.90 3.77
4727 5571 1.632589 ATGACCAAAGGGCTTCCAAC 58.367 50.000 0.00 0.00 37.90 3.77
4728 5572 3.534357 TTATGACCAAAGGGCTTCCAA 57.466 42.857 0.00 0.00 37.90 3.53
4729 5573 3.245586 ACATTATGACCAAAGGGCTTCCA 60.246 43.478 0.00 0.00 37.90 3.53
4730 5574 3.365472 ACATTATGACCAAAGGGCTTCC 58.635 45.455 0.00 0.00 37.90 3.46
4731 5575 3.065371 CGACATTATGACCAAAGGGCTTC 59.935 47.826 0.00 0.00 37.90 3.86
4732 5576 3.016736 CGACATTATGACCAAAGGGCTT 58.983 45.455 0.00 0.00 37.90 4.35
4733 5577 2.643551 CGACATTATGACCAAAGGGCT 58.356 47.619 0.00 0.00 37.90 5.19
4734 5578 1.676006 CCGACATTATGACCAAAGGGC 59.324 52.381 0.00 0.00 37.90 5.19
4735 5579 1.676006 GCCGACATTATGACCAAAGGG 59.324 52.381 0.00 0.00 41.29 3.95
4736 5580 2.364632 TGCCGACATTATGACCAAAGG 58.635 47.619 0.00 0.00 0.00 3.11
4737 5581 4.433186 TTTGCCGACATTATGACCAAAG 57.567 40.909 0.00 0.00 0.00 2.77
4738 5582 5.167121 CAATTTGCCGACATTATGACCAAA 58.833 37.500 0.00 0.86 0.00 3.28
4739 5583 4.219507 ACAATTTGCCGACATTATGACCAA 59.780 37.500 0.00 0.00 0.00 3.67
4740 5584 3.761218 ACAATTTGCCGACATTATGACCA 59.239 39.130 0.00 0.00 0.00 4.02
4741 5585 4.370364 ACAATTTGCCGACATTATGACC 57.630 40.909 0.00 0.00 0.00 4.02
4742 5586 4.562394 CCAACAATTTGCCGACATTATGAC 59.438 41.667 0.00 0.00 0.00 3.06
4743 5587 4.381398 CCCAACAATTTGCCGACATTATGA 60.381 41.667 0.00 0.00 0.00 2.15
4744 5588 3.864583 CCCAACAATTTGCCGACATTATG 59.135 43.478 0.00 0.00 0.00 1.90
4745 5589 3.513515 ACCCAACAATTTGCCGACATTAT 59.486 39.130 0.00 0.00 0.00 1.28
4746 5590 2.894126 ACCCAACAATTTGCCGACATTA 59.106 40.909 0.00 0.00 0.00 1.90
4747 5591 1.691434 ACCCAACAATTTGCCGACATT 59.309 42.857 0.00 0.00 0.00 2.71
4748 5592 1.000731 CACCCAACAATTTGCCGACAT 59.999 47.619 0.00 0.00 0.00 3.06
4749 5593 0.387202 CACCCAACAATTTGCCGACA 59.613 50.000 0.00 0.00 0.00 4.35
4750 5594 0.319469 CCACCCAACAATTTGCCGAC 60.319 55.000 0.00 0.00 0.00 4.79
4751 5595 0.757188 ACCACCCAACAATTTGCCGA 60.757 50.000 0.00 0.00 0.00 5.54
4752 5596 0.319469 GACCACCCAACAATTTGCCG 60.319 55.000 0.00 0.00 0.00 5.69
4753 5597 0.319469 CGACCACCCAACAATTTGCC 60.319 55.000 0.00 0.00 0.00 4.52
4754 5598 0.319469 CCGACCACCCAACAATTTGC 60.319 55.000 0.00 0.00 0.00 3.68
4755 5599 1.036707 ACCGACCACCCAACAATTTG 58.963 50.000 0.00 0.00 0.00 2.32
4756 5600 2.232399 GTACCGACCACCCAACAATTT 58.768 47.619 0.00 0.00 0.00 1.82
4757 5601 1.143277 TGTACCGACCACCCAACAATT 59.857 47.619 0.00 0.00 0.00 2.32
4758 5602 0.766131 TGTACCGACCACCCAACAAT 59.234 50.000 0.00 0.00 0.00 2.71
4759 5603 0.766131 ATGTACCGACCACCCAACAA 59.234 50.000 0.00 0.00 0.00 2.83
4760 5604 0.035598 CATGTACCGACCACCCAACA 59.964 55.000 0.00 0.00 0.00 3.33
4761 5605 0.322322 TCATGTACCGACCACCCAAC 59.678 55.000 0.00 0.00 0.00 3.77
4762 5606 1.002659 CTTCATGTACCGACCACCCAA 59.997 52.381 0.00 0.00 0.00 4.12
4763 5607 0.611200 CTTCATGTACCGACCACCCA 59.389 55.000 0.00 0.00 0.00 4.51
4764 5608 0.899720 TCTTCATGTACCGACCACCC 59.100 55.000 0.00 0.00 0.00 4.61
4765 5609 2.289195 TGTTCTTCATGTACCGACCACC 60.289 50.000 0.00 0.00 0.00 4.61
4766 5610 2.735134 GTGTTCTTCATGTACCGACCAC 59.265 50.000 0.00 0.00 0.00 4.16
4767 5611 2.608506 CGTGTTCTTCATGTACCGACCA 60.609 50.000 0.00 0.00 0.00 4.02
4768 5612 1.990563 CGTGTTCTTCATGTACCGACC 59.009 52.381 0.00 0.00 0.00 4.79
4769 5613 2.937591 TCGTGTTCTTCATGTACCGAC 58.062 47.619 0.00 0.00 34.87 4.79
4770 5614 3.571571 CTTCGTGTTCTTCATGTACCGA 58.428 45.455 0.00 0.00 34.87 4.69
4771 5615 2.092211 GCTTCGTGTTCTTCATGTACCG 59.908 50.000 0.00 0.00 34.87 4.02
4772 5616 3.123621 CAGCTTCGTGTTCTTCATGTACC 59.876 47.826 0.00 0.00 34.87 3.34
4773 5617 3.987868 TCAGCTTCGTGTTCTTCATGTAC 59.012 43.478 0.00 0.00 34.87 2.90
4774 5618 3.987868 GTCAGCTTCGTGTTCTTCATGTA 59.012 43.478 0.00 0.00 34.87 2.29
4775 5619 2.802816 GTCAGCTTCGTGTTCTTCATGT 59.197 45.455 0.00 0.00 34.87 3.21
4776 5620 3.062763 AGTCAGCTTCGTGTTCTTCATG 58.937 45.455 0.00 0.00 34.61 3.07
4777 5621 3.243873 TGAGTCAGCTTCGTGTTCTTCAT 60.244 43.478 0.00 0.00 0.00 2.57
4778 5622 2.100749 TGAGTCAGCTTCGTGTTCTTCA 59.899 45.455 0.00 0.00 0.00 3.02
4779 5623 2.743938 TGAGTCAGCTTCGTGTTCTTC 58.256 47.619 0.00 0.00 0.00 2.87
4780 5624 2.866762 GTTGAGTCAGCTTCGTGTTCTT 59.133 45.455 0.00 0.00 0.00 2.52
4781 5625 2.101582 AGTTGAGTCAGCTTCGTGTTCT 59.898 45.455 3.27 0.00 0.00 3.01
4782 5626 2.219674 CAGTTGAGTCAGCTTCGTGTTC 59.780 50.000 6.78 0.00 0.00 3.18
4783 5627 2.159099 TCAGTTGAGTCAGCTTCGTGTT 60.159 45.455 6.78 0.00 0.00 3.32
4784 5628 1.409064 TCAGTTGAGTCAGCTTCGTGT 59.591 47.619 6.78 0.00 0.00 4.49
4785 5629 2.140065 TCAGTTGAGTCAGCTTCGTG 57.860 50.000 6.78 0.00 0.00 4.35
4786 5630 2.474816 GTTCAGTTGAGTCAGCTTCGT 58.525 47.619 6.78 0.00 0.00 3.85
4787 5631 1.795286 GGTTCAGTTGAGTCAGCTTCG 59.205 52.381 6.78 0.00 0.00 3.79
4788 5632 3.118905 AGGTTCAGTTGAGTCAGCTTC 57.881 47.619 6.78 1.49 0.00 3.86
4789 5633 3.135530 AGAAGGTTCAGTTGAGTCAGCTT 59.864 43.478 6.78 0.00 0.00 3.74
4790 5634 2.703007 AGAAGGTTCAGTTGAGTCAGCT 59.297 45.455 3.27 3.27 0.00 4.24
4791 5635 3.063485 GAGAAGGTTCAGTTGAGTCAGC 58.937 50.000 0.00 0.00 0.00 4.26
4792 5636 3.312828 CGAGAAGGTTCAGTTGAGTCAG 58.687 50.000 0.00 0.00 0.00 3.51
4793 5637 2.545952 GCGAGAAGGTTCAGTTGAGTCA 60.546 50.000 0.00 0.00 0.00 3.41
4794 5638 2.062519 GCGAGAAGGTTCAGTTGAGTC 58.937 52.381 0.00 0.00 0.00 3.36
4795 5639 1.603172 CGCGAGAAGGTTCAGTTGAGT 60.603 52.381 0.00 0.00 0.00 3.41
4796 5640 1.063806 CGCGAGAAGGTTCAGTTGAG 58.936 55.000 0.00 0.00 0.00 3.02
4797 5641 0.319555 CCGCGAGAAGGTTCAGTTGA 60.320 55.000 8.23 0.00 0.00 3.18
4798 5642 0.319555 TCCGCGAGAAGGTTCAGTTG 60.320 55.000 8.23 0.00 0.00 3.16
4799 5643 0.319641 GTCCGCGAGAAGGTTCAGTT 60.320 55.000 8.23 0.00 0.00 3.16
4800 5644 1.289380 GTCCGCGAGAAGGTTCAGT 59.711 57.895 8.23 0.00 0.00 3.41
4801 5645 1.801913 CGTCCGCGAGAAGGTTCAG 60.802 63.158 8.23 0.00 41.33 3.02
4802 5646 2.257371 CGTCCGCGAGAAGGTTCA 59.743 61.111 8.23 0.00 41.33 3.18
4803 5647 2.564975 TCGTCCGCGAGAAGGTTC 59.435 61.111 8.23 0.00 42.81 3.62
4811 5655 0.731514 GATGTTCACTTCGTCCGCGA 60.732 55.000 8.23 0.00 46.36 5.87
4812 5656 1.006825 TGATGTTCACTTCGTCCGCG 61.007 55.000 0.00 0.00 39.92 6.46
4813 5657 1.126846 CTTGATGTTCACTTCGTCCGC 59.873 52.381 0.00 0.00 0.00 5.54
4814 5658 2.404215 ACTTGATGTTCACTTCGTCCG 58.596 47.619 0.00 0.00 0.00 4.79
4825 5669 6.392354 CACCAAGCATATTGAACTTGATGTT 58.608 36.000 3.65 0.00 42.71 2.71
4826 5670 5.622914 GCACCAAGCATATTGAACTTGATGT 60.623 40.000 3.65 0.00 42.71 3.06
4827 5671 4.802039 GCACCAAGCATATTGAACTTGATG 59.198 41.667 3.65 0.00 42.71 3.07
4828 5672 4.439153 CGCACCAAGCATATTGAACTTGAT 60.439 41.667 3.65 0.00 46.13 2.57
4829 5673 3.119884 CGCACCAAGCATATTGAACTTGA 60.120 43.478 3.65 0.00 46.13 3.02
4830 5674 3.173599 CGCACCAAGCATATTGAACTTG 58.826 45.455 0.00 0.00 46.13 3.16
4831 5675 2.415893 GCGCACCAAGCATATTGAACTT 60.416 45.455 0.30 0.00 46.13 2.66
4832 5676 1.133025 GCGCACCAAGCATATTGAACT 59.867 47.619 0.30 0.00 46.13 3.01
4833 5677 1.133025 AGCGCACCAAGCATATTGAAC 59.867 47.619 11.47 0.00 46.13 3.18
4834 5678 1.462616 AGCGCACCAAGCATATTGAA 58.537 45.000 11.47 0.00 46.13 2.69
4835 5679 1.462616 AAGCGCACCAAGCATATTGA 58.537 45.000 11.47 0.00 46.13 2.57
4836 5680 3.302555 CATAAGCGCACCAAGCATATTG 58.697 45.455 11.47 0.00 46.13 1.90
4837 5681 2.287788 GCATAAGCGCACCAAGCATATT 60.288 45.455 11.47 0.00 46.13 1.28
4838 5682 1.267806 GCATAAGCGCACCAAGCATAT 59.732 47.619 11.47 0.00 46.13 1.78
4839 5683 0.662619 GCATAAGCGCACCAAGCATA 59.337 50.000 11.47 0.00 46.13 3.14
4840 5684 1.434696 GCATAAGCGCACCAAGCAT 59.565 52.632 11.47 0.00 46.13 3.79
4841 5685 2.876955 GCATAAGCGCACCAAGCA 59.123 55.556 11.47 0.00 46.13 3.91
4851 5695 1.571919 CAGTCCGGTGTAGCATAAGC 58.428 55.000 0.00 0.00 42.56 3.09
4852 5696 1.806623 GCCAGTCCGGTGTAGCATAAG 60.807 57.143 0.00 0.00 36.97 1.73
4853 5697 0.177141 GCCAGTCCGGTGTAGCATAA 59.823 55.000 0.00 0.00 36.97 1.90
4854 5698 1.682451 GGCCAGTCCGGTGTAGCATA 61.682 60.000 0.00 0.00 36.97 3.14
4855 5699 2.584608 GCCAGTCCGGTGTAGCAT 59.415 61.111 0.00 0.00 36.97 3.79
4856 5700 3.702048 GGCCAGTCCGGTGTAGCA 61.702 66.667 0.00 0.00 36.97 3.49
4865 5709 4.208686 CTACCTCGCGGCCAGTCC 62.209 72.222 6.13 0.00 0.00 3.85
4866 5710 4.208686 CCTACCTCGCGGCCAGTC 62.209 72.222 6.13 0.00 0.00 3.51
4868 5712 4.514577 CACCTACCTCGCGGCCAG 62.515 72.222 6.13 0.00 0.00 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.