Multiple sequence alignment - TraesCS1D01G453800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G453800 chr1D 100.000 5412 0 0 1 5412 494545947 494551358 0.000000e+00 9995.0
1 TraesCS1D01G453800 chr1D 87.682 2947 311 35 1880 4790 448119 451049 0.000000e+00 3384.0
2 TraesCS1D01G453800 chr1D 87.461 2855 324 17 1941 4771 697003 694159 0.000000e+00 3258.0
3 TraesCS1D01G453800 chr1D 86.833 2681 323 19 1843 4500 460073 462746 0.000000e+00 2968.0
4 TraesCS1D01G453800 chr1D 89.326 2239 226 7 2183 4416 619901 617671 0.000000e+00 2798.0
5 TraesCS1D01G453800 chr1D 85.236 1375 187 10 822 2190 621330 619966 0.000000e+00 1400.0
6 TraesCS1D01G453800 chr1D 85.370 1203 174 2 993 2194 647396 648597 0.000000e+00 1245.0
7 TraesCS1D01G453800 chr1D 82.258 186 31 2 667 851 33989178 33989362 5.610000e-35 159.0
8 TraesCS1D01G453800 chr1B 97.164 4266 116 5 541 4804 687785027 687789289 0.000000e+00 7203.0
9 TraesCS1D01G453800 chr1B 86.866 2642 281 35 2180 4798 3943618 3946216 0.000000e+00 2896.0
10 TraesCS1D01G453800 chr1B 88.404 2337 253 8 2180 4500 4096814 4099148 0.000000e+00 2798.0
11 TraesCS1D01G453800 chr1B 89.058 2239 220 14 2180 4410 4115772 4117993 0.000000e+00 2754.0
12 TraesCS1D01G453800 chr1B 86.182 1375 170 14 824 2190 4856573 4855211 0.000000e+00 1469.0
13 TraesCS1D01G453800 chr1B 86.111 1332 171 10 856 2184 4150621 4151941 0.000000e+00 1423.0
14 TraesCS1D01G453800 chr1B 84.370 1318 189 15 881 2190 4591761 4590453 0.000000e+00 1277.0
15 TraesCS1D01G453800 chr1B 86.435 1150 150 5 1044 2190 4483642 4482496 0.000000e+00 1254.0
16 TraesCS1D01G453800 chr1B 86.177 1143 154 4 1044 2184 3951180 3952320 0.000000e+00 1232.0
17 TraesCS1D01G453800 chr1B 84.644 534 22 22 54 543 687784481 687784998 1.360000e-130 477.0
18 TraesCS1D01G453800 chr1B 93.502 277 13 2 4804 5080 687789321 687789592 1.810000e-109 407.0
19 TraesCS1D01G453800 chr1B 84.752 282 39 4 4509 4789 4759006 4758728 4.130000e-71 279.0
20 TraesCS1D01G453800 chr1B 81.953 338 51 7 554 884 4911560 4911226 1.480000e-70 278.0
21 TraesCS1D01G453800 chr1B 84.328 268 22 8 54 301 4859258 4858991 1.510000e-60 244.0
22 TraesCS1D01G453800 chr1B 85.849 212 24 5 551 758 4538414 4538205 2.540000e-53 220.0
23 TraesCS1D01G453800 chr1B 82.870 216 35 2 638 852 4511232 4511018 5.530000e-45 193.0
24 TraesCS1D01G453800 chr1B 78.481 316 46 11 543 852 46695630 46695929 2.570000e-43 187.0
25 TraesCS1D01G453800 chr1B 82.063 223 30 7 543 758 4951072 4950853 1.200000e-41 182.0
26 TraesCS1D01G453800 chr1B 88.333 60 5 2 5312 5369 4189284 4189343 2.700000e-08 71.3
27 TraesCS1D01G453800 chr1A 87.322 2595 283 23 2183 4746 3655977 3653398 0.000000e+00 2928.0
28 TraesCS1D01G453800 chr1A 85.973 1383 167 21 822 2190 3657555 3656186 0.000000e+00 1454.0
29 TraesCS1D01G453800 chr1A 84.615 286 40 4 4509 4793 3488365 3488083 1.150000e-71 281.0
30 TraesCS1D01G453800 chr1A 86.142 267 18 8 54 301 3695688 3695422 2.480000e-68 270.0
31 TraesCS1D01G453800 chr1A 85.149 202 24 4 545 742 3016700 3016899 9.190000e-48 202.0
32 TraesCS1D01G453800 chr1A 78.201 289 50 11 545 831 3726208 3725931 7.210000e-39 172.0
33 TraesCS1D01G453800 chr1A 85.593 118 16 1 4896 5013 3450544 3450428 7.360000e-24 122.0
34 TraesCS1D01G453800 chr1A 80.272 147 27 2 667 813 32549080 32549224 5.730000e-20 110.0
35 TraesCS1D01G453800 chr3D 89.408 2313 223 10 2183 4480 560056873 560054568 0.000000e+00 2894.0
36 TraesCS1D01G453800 chr3D 93.750 64 2 1 4804 4865 457400802 457400865 1.600000e-15 95.3
37 TraesCS1D01G453800 chr3B 91.781 73 5 1 4804 4876 669331004 669331075 3.450000e-17 100.0
38 TraesCS1D01G453800 chr3B 91.304 69 5 1 4804 4871 5175513 5175445 5.770000e-15 93.5
39 TraesCS1D01G453800 chr3B 92.424 66 2 2 4804 4866 257512425 257512490 2.080000e-14 91.6
40 TraesCS1D01G453800 chr2B 92.754 69 5 0 4804 4872 614917156 614917224 3.450000e-17 100.0
41 TraesCS1D01G453800 chr2A 93.750 64 2 2 4804 4865 549890403 549890466 1.600000e-15 95.3
42 TraesCS1D01G453800 chr7A 91.304 69 4 2 4804 4872 32013152 32013218 5.770000e-15 93.5
43 TraesCS1D01G453800 chr5B 87.654 81 2 4 4804 4877 669713697 669713618 2.690000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G453800 chr1D 494545947 494551358 5411 False 9995.000000 9995 100.0000 1 5412 1 chr1D.!!$F5 5411
1 TraesCS1D01G453800 chr1D 448119 451049 2930 False 3384.000000 3384 87.6820 1880 4790 1 chr1D.!!$F1 2910
2 TraesCS1D01G453800 chr1D 694159 697003 2844 True 3258.000000 3258 87.4610 1941 4771 1 chr1D.!!$R1 2830
3 TraesCS1D01G453800 chr1D 460073 462746 2673 False 2968.000000 2968 86.8330 1843 4500 1 chr1D.!!$F2 2657
4 TraesCS1D01G453800 chr1D 617671 621330 3659 True 2099.000000 2798 87.2810 822 4416 2 chr1D.!!$R2 3594
5 TraesCS1D01G453800 chr1D 647396 648597 1201 False 1245.000000 1245 85.3700 993 2194 1 chr1D.!!$F3 1201
6 TraesCS1D01G453800 chr1B 3943618 3946216 2598 False 2896.000000 2896 86.8660 2180 4798 1 chr1B.!!$F1 2618
7 TraesCS1D01G453800 chr1B 4096814 4099148 2334 False 2798.000000 2798 88.4040 2180 4500 1 chr1B.!!$F3 2320
8 TraesCS1D01G453800 chr1B 4115772 4117993 2221 False 2754.000000 2754 89.0580 2180 4410 1 chr1B.!!$F4 2230
9 TraesCS1D01G453800 chr1B 687784481 687789592 5111 False 2695.666667 7203 91.7700 54 5080 3 chr1B.!!$F8 5026
10 TraesCS1D01G453800 chr1B 4150621 4151941 1320 False 1423.000000 1423 86.1110 856 2184 1 chr1B.!!$F5 1328
11 TraesCS1D01G453800 chr1B 4590453 4591761 1308 True 1277.000000 1277 84.3700 881 2190 1 chr1B.!!$R4 1309
12 TraesCS1D01G453800 chr1B 4482496 4483642 1146 True 1254.000000 1254 86.4350 1044 2190 1 chr1B.!!$R1 1146
13 TraesCS1D01G453800 chr1B 3951180 3952320 1140 False 1232.000000 1232 86.1770 1044 2184 1 chr1B.!!$F2 1140
14 TraesCS1D01G453800 chr1B 4855211 4859258 4047 True 856.500000 1469 85.2550 54 2190 2 chr1B.!!$R8 2136
15 TraesCS1D01G453800 chr1A 3653398 3657555 4157 True 2191.000000 2928 86.6475 822 4746 2 chr1A.!!$R5 3924
16 TraesCS1D01G453800 chr3D 560054568 560056873 2305 True 2894.000000 2894 89.4080 2183 4480 1 chr3D.!!$R1 2297

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
445 2333 0.178068 AGTTGCTGAGGTCAACACGT 59.822 50.000 8.33 0.00 44.50 4.49 F
446 2334 1.014352 GTTGCTGAGGTCAACACGTT 58.986 50.000 0.00 0.00 42.35 3.99 F
449 2337 1.411246 TGCTGAGGTCAACACGTTACT 59.589 47.619 0.00 0.00 0.00 2.24 F
917 2943 1.444553 GCGTTCACTGAGGACCTCG 60.445 63.158 16.81 13.32 32.35 4.63 F
1677 3720 2.040544 CAACAGCACCTTAGGCGGG 61.041 63.158 0.00 0.00 36.08 6.13 F
2613 4876 2.358898 AGCACAAAATATGATCACGGGC 59.641 45.455 0.00 0.00 0.00 6.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1672 3715 1.067425 GGTTTTTGGTATCAACCCGCC 60.067 52.381 0.00 0.0 46.16 6.13 R
1704 3747 3.690628 GGCGCAAAGTATTTAGTTGGGTA 59.309 43.478 10.83 0.0 35.03 3.69 R
1823 3866 7.840716 TGAGATTGGTTATGGAGATTGGAATTT 59.159 33.333 0.00 0.0 0.00 1.82 R
2613 4876 6.500589 TTAGAAAGGATTGGAGGTATGGAG 57.499 41.667 0.00 0.0 0.00 3.86 R
3672 5944 4.672587 TCCCTGCTGAATGTAGTCATAC 57.327 45.455 0.00 0.0 33.49 2.39 R
4581 6888 0.030638 CAGGAAAAACCACAGGCACG 59.969 55.000 0.00 0.0 42.04 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.063180 TCATGATGATGCTTTGGTTGTTC 57.937 39.130 0.00 0.00 0.00 3.18
23 24 4.523558 TCATGATGATGCTTTGGTTGTTCA 59.476 37.500 0.00 0.00 0.00 3.18
24 25 4.508461 TGATGATGCTTTGGTTGTTCAG 57.492 40.909 0.00 0.00 0.00 3.02
25 26 3.256383 TGATGATGCTTTGGTTGTTCAGG 59.744 43.478 0.00 0.00 0.00 3.86
26 27 1.340889 TGATGCTTTGGTTGTTCAGGC 59.659 47.619 0.00 0.00 0.00 4.85
27 28 1.615392 GATGCTTTGGTTGTTCAGGCT 59.385 47.619 0.00 0.00 0.00 4.58
28 29 1.484038 TGCTTTGGTTGTTCAGGCTT 58.516 45.000 0.00 0.00 0.00 4.35
29 30 1.830477 TGCTTTGGTTGTTCAGGCTTT 59.170 42.857 0.00 0.00 0.00 3.51
30 31 2.159114 TGCTTTGGTTGTTCAGGCTTTC 60.159 45.455 0.00 0.00 0.00 2.62
31 32 2.159114 GCTTTGGTTGTTCAGGCTTTCA 60.159 45.455 0.00 0.00 0.00 2.69
32 33 3.678529 GCTTTGGTTGTTCAGGCTTTCAA 60.679 43.478 0.00 0.00 0.00 2.69
33 34 4.696455 CTTTGGTTGTTCAGGCTTTCAAT 58.304 39.130 0.00 0.00 0.00 2.57
34 35 4.751767 TTGGTTGTTCAGGCTTTCAATT 57.248 36.364 0.00 0.00 0.00 2.32
35 36 4.320608 TGGTTGTTCAGGCTTTCAATTC 57.679 40.909 0.00 0.00 0.00 2.17
36 37 3.069443 TGGTTGTTCAGGCTTTCAATTCC 59.931 43.478 0.00 0.00 0.00 3.01
37 38 3.069443 GGTTGTTCAGGCTTTCAATTCCA 59.931 43.478 0.00 0.00 0.00 3.53
38 39 4.051237 GTTGTTCAGGCTTTCAATTCCAC 58.949 43.478 0.00 0.00 0.00 4.02
39 40 3.565307 TGTTCAGGCTTTCAATTCCACT 58.435 40.909 0.00 0.00 0.00 4.00
40 41 3.318839 TGTTCAGGCTTTCAATTCCACTG 59.681 43.478 0.00 0.00 0.00 3.66
41 42 1.888512 TCAGGCTTTCAATTCCACTGC 59.111 47.619 0.00 0.00 0.00 4.40
42 43 1.067354 CAGGCTTTCAATTCCACTGCC 60.067 52.381 0.00 0.00 39.19 4.85
43 44 1.203100 AGGCTTTCAATTCCACTGCCT 60.203 47.619 0.00 0.00 43.61 4.75
44 45 1.203287 GGCTTTCAATTCCACTGCCTC 59.797 52.381 0.00 0.00 36.32 4.70
45 46 1.888512 GCTTTCAATTCCACTGCCTCA 59.111 47.619 0.00 0.00 0.00 3.86
46 47 2.494870 GCTTTCAATTCCACTGCCTCAT 59.505 45.455 0.00 0.00 0.00 2.90
47 48 3.428589 GCTTTCAATTCCACTGCCTCATC 60.429 47.826 0.00 0.00 0.00 2.92
48 49 3.726557 TTCAATTCCACTGCCTCATCT 57.273 42.857 0.00 0.00 0.00 2.90
49 50 3.726557 TCAATTCCACTGCCTCATCTT 57.273 42.857 0.00 0.00 0.00 2.40
50 51 4.038271 TCAATTCCACTGCCTCATCTTT 57.962 40.909 0.00 0.00 0.00 2.52
51 52 4.012374 TCAATTCCACTGCCTCATCTTTC 58.988 43.478 0.00 0.00 0.00 2.62
52 53 2.496899 TTCCACTGCCTCATCTTTCC 57.503 50.000 0.00 0.00 0.00 3.13
81 82 0.759060 ACTTGGGGTCCAGGTTTTGC 60.759 55.000 0.00 0.00 41.07 3.68
111 112 5.006261 CCAAAATTCAACACGGAAACCTTTC 59.994 40.000 0.00 0.00 36.46 2.62
138 141 7.625498 TTTCCAATAAGACCTGGGAATTTTT 57.375 32.000 0.00 0.00 37.47 1.94
163 166 2.977169 ACATTTAATCGTTGCGTTGCAC 59.023 40.909 0.00 0.00 38.71 4.57
206 209 3.631686 TCTTTTGTAGCAGCTGAAAAGCA 59.368 39.130 23.63 14.72 36.02 3.91
208 211 4.589216 TTTGTAGCAGCTGAAAAGCAAT 57.411 36.364 20.43 0.00 37.25 3.56
209 212 5.703978 TTTGTAGCAGCTGAAAAGCAATA 57.296 34.783 20.43 3.57 37.25 1.90
210 213 4.685169 TGTAGCAGCTGAAAAGCAATAC 57.315 40.909 20.43 6.83 37.25 1.89
211 214 4.326826 TGTAGCAGCTGAAAAGCAATACT 58.673 39.130 20.43 2.97 37.25 2.12
212 215 5.487433 TGTAGCAGCTGAAAAGCAATACTA 58.513 37.500 20.43 1.89 37.25 1.82
213 216 4.954092 AGCAGCTGAAAAGCAATACTAC 57.046 40.909 20.43 0.00 37.25 2.73
214 217 4.326826 AGCAGCTGAAAAGCAATACTACA 58.673 39.130 20.43 0.00 37.25 2.74
215 218 4.394300 AGCAGCTGAAAAGCAATACTACAG 59.606 41.667 20.43 0.00 37.25 2.74
217 220 5.447010 GCAGCTGAAAAGCAATACTACAGAG 60.447 44.000 20.43 0.00 37.25 3.35
218 221 5.871524 CAGCTGAAAAGCAATACTACAGAGA 59.128 40.000 8.42 0.00 37.25 3.10
274 295 2.229543 ACTGCAGTTACATGTTGCATGG 59.770 45.455 20.79 14.02 45.72 3.66
275 296 1.067706 TGCAGTTACATGTTGCATGGC 60.068 47.619 17.58 9.16 42.41 4.40
373 418 1.068741 AGACGGAGGACAAGTGTGAAC 59.931 52.381 0.00 0.00 0.00 3.18
443 2331 4.410492 CATAAGTTGCTGAGGTCAACAC 57.590 45.455 8.33 0.00 44.50 3.32
444 2332 1.299541 AAGTTGCTGAGGTCAACACG 58.700 50.000 8.33 0.00 44.50 4.49
445 2333 0.178068 AGTTGCTGAGGTCAACACGT 59.822 50.000 8.33 0.00 44.50 4.49
446 2334 1.014352 GTTGCTGAGGTCAACACGTT 58.986 50.000 0.00 0.00 42.35 3.99
447 2335 2.159014 AGTTGCTGAGGTCAACACGTTA 60.159 45.455 8.33 0.00 44.50 3.18
448 2336 1.860676 TGCTGAGGTCAACACGTTAC 58.139 50.000 0.00 0.00 0.00 2.50
449 2337 1.411246 TGCTGAGGTCAACACGTTACT 59.589 47.619 0.00 0.00 0.00 2.24
450 2338 2.159014 TGCTGAGGTCAACACGTTACTT 60.159 45.455 0.00 0.00 0.00 2.24
451 2339 2.475487 GCTGAGGTCAACACGTTACTTC 59.525 50.000 0.00 0.00 0.00 3.01
452 2340 3.057734 CTGAGGTCAACACGTTACTTCC 58.942 50.000 0.00 0.00 0.00 3.46
453 2341 2.696707 TGAGGTCAACACGTTACTTCCT 59.303 45.455 0.00 0.00 0.00 3.36
465 2353 4.586001 ACGTTACTTCCTACAAGACTTGGA 59.414 41.667 19.16 10.15 34.12 3.53
534 2424 5.778862 CACGGATTTTTCCCACTATTTGTT 58.221 37.500 0.00 0.00 0.00 2.83
543 2433 6.656632 TTCCCACTATTTGTTGTTGCATTA 57.343 33.333 0.00 0.00 0.00 1.90
545 2435 7.238486 TCCCACTATTTGTTGTTGCATTATT 57.762 32.000 0.00 0.00 0.00 1.40
559 2480 6.210385 TGTTGCATTATTTGGTTCCATGTACT 59.790 34.615 0.00 0.00 0.00 2.73
586 2507 6.693113 ACTGAAAAGCGAAAAGAGAAACATTC 59.307 34.615 0.00 0.00 0.00 2.67
623 2544 4.855531 AGGCATGACGAAACAAGTTTTAC 58.144 39.130 0.00 0.00 32.11 2.01
705 2626 8.856490 AAAAACTCTACTGCAATGTTAACTTG 57.144 30.769 7.22 9.72 0.00 3.16
721 2644 3.045601 ACTTGAGTCCATACAGTGCAC 57.954 47.619 9.40 9.40 0.00 4.57
743 2666 5.401674 CACAAGTTGTAGACGTAGGAGAAAC 59.598 44.000 8.49 0.00 0.00 2.78
763 2686 2.248248 CGGGGAAGATATGAGTAGGCA 58.752 52.381 0.00 0.00 0.00 4.75
764 2687 2.028930 CGGGGAAGATATGAGTAGGCAC 60.029 54.545 0.00 0.00 0.00 5.01
765 2688 2.303311 GGGGAAGATATGAGTAGGCACC 59.697 54.545 0.00 0.00 0.00 5.01
766 2689 2.972713 GGGAAGATATGAGTAGGCACCA 59.027 50.000 0.00 0.00 0.00 4.17
917 2943 1.444553 GCGTTCACTGAGGACCTCG 60.445 63.158 16.81 13.32 32.35 4.63
1047 3087 4.281688 CCATCTTCCTCAACACCATTGTTT 59.718 41.667 0.00 0.00 43.89 2.83
1173 3216 3.141398 CTGGAAAGCTACACTTGCAAGA 58.859 45.455 32.50 9.84 37.14 3.02
1227 3270 3.560251 AGCCCGTGCAACTGGACT 61.560 61.111 2.58 0.00 45.00 3.85
1344 3387 2.744202 TGAGCTCAAATTTTCGGCTCTC 59.256 45.455 24.45 12.15 46.39 3.20
1638 3681 3.157087 GGAGATTGGAAGGCTTGTCAAA 58.843 45.455 3.46 0.00 0.00 2.69
1672 3715 2.417933 CAGCTAAGCAACAGCACCTTAG 59.582 50.000 6.93 0.00 41.66 2.18
1677 3720 2.040544 CAACAGCACCTTAGGCGGG 61.041 63.158 0.00 0.00 36.08 6.13
1823 3866 6.477053 TGGTTCAAATCATTTTTCAGGTCA 57.523 33.333 0.00 0.00 0.00 4.02
2146 4189 7.715686 ACAGCTTAGGAAATATTACCAAGCTAC 59.284 37.037 18.36 0.00 42.50 3.58
2355 4614 6.668645 ACCAGCAAATATATGTTTAGGTGGA 58.331 36.000 29.56 0.00 38.52 4.02
2613 4876 2.358898 AGCACAAAATATGATCACGGGC 59.641 45.455 0.00 0.00 0.00 6.13
2715 4978 4.321230 CCACCAGAAATCTGCACTTTAACC 60.321 45.833 4.87 0.00 42.47 2.85
3672 5944 6.201517 CCATCCAGCGTATAAATTTCTTGTG 58.798 40.000 0.00 0.00 0.00 3.33
3998 6271 7.792374 AGTATAACCGTTCTTCTCACGTATA 57.208 36.000 0.00 0.00 35.81 1.47
4233 6515 1.402984 GCCGACAACACCAACAACAAA 60.403 47.619 0.00 0.00 0.00 2.83
4463 6757 1.253100 GAGGCCGATTTTGGTTTCCA 58.747 50.000 0.00 0.00 0.00 3.53
4490 6784 1.335182 ACTCGAGTCACTCATATGCCG 59.665 52.381 13.58 0.00 0.00 5.69
4537 6843 5.867716 AGTTGATGGTTCATTGTACGTCTAC 59.132 40.000 0.00 0.00 0.00 2.59
4556 6863 5.061853 TCTACGTGTTTGTAGACACTCTCT 58.938 41.667 0.00 0.00 44.39 3.10
4581 6888 5.817296 TGATACAGTGTAAGATCACCATTGC 59.183 40.000 7.16 0.00 38.91 3.56
4617 6924 0.030638 CTGCAAAGGGTTTCCACGTG 59.969 55.000 9.08 9.08 34.83 4.49
4689 6999 9.410556 GCCGATTTCTAACAATGCATAAATATT 57.589 29.630 0.00 0.00 0.00 1.28
4734 7047 9.906660 CTTGTAAAATGTATGTGGTGTTTATGT 57.093 29.630 0.00 0.00 0.00 2.29
4763 7091 6.425577 TTTGTTTAGACATAATACCCGCAC 57.574 37.500 0.00 0.00 35.29 5.34
4783 7111 1.192534 CGTGACACTTTCTTTCGGCTC 59.807 52.381 3.68 0.00 0.00 4.70
4854 7215 6.148150 TCAACAAACGTCTTACATTATGGGAC 59.852 38.462 0.00 1.75 0.00 4.46
4901 7262 2.527497 TGCTCCAATGAAGGCATGAAA 58.473 42.857 0.00 0.00 34.26 2.69
4945 7306 2.930040 CAAAACTGACGCGATATCAGGT 59.070 45.455 23.84 17.66 46.27 4.00
4951 7312 1.000163 GACGCGATATCAGGTGGTCAT 60.000 52.381 15.93 0.00 0.00 3.06
4961 7322 2.754552 TCAGGTGGTCATGCTTTATTGC 59.245 45.455 0.00 0.00 0.00 3.56
5002 7363 1.440618 TACCTTGGACCAAGCAGGAA 58.559 50.000 26.34 8.13 39.85 3.36
5004 7365 1.237285 CCTTGGACCAAGCAGGAACG 61.237 60.000 26.34 9.06 39.85 3.95
5007 7368 0.321564 TGGACCAAGCAGGAACGATG 60.322 55.000 1.83 0.00 41.22 3.84
5008 7369 0.036388 GGACCAAGCAGGAACGATGA 60.036 55.000 1.83 0.00 41.22 2.92
5009 7370 1.079503 GACCAAGCAGGAACGATGAC 58.920 55.000 1.83 0.00 41.22 3.06
5010 7371 0.396435 ACCAAGCAGGAACGATGACA 59.604 50.000 1.83 0.00 41.22 3.58
5011 7372 1.202758 ACCAAGCAGGAACGATGACAA 60.203 47.619 1.83 0.00 41.22 3.18
5012 7373 2.086869 CCAAGCAGGAACGATGACAAT 58.913 47.619 0.00 0.00 41.22 2.71
5018 7379 5.670485 AGCAGGAACGATGACAATACAATA 58.330 37.500 0.00 0.00 0.00 1.90
5019 7380 5.523916 AGCAGGAACGATGACAATACAATAC 59.476 40.000 0.00 0.00 0.00 1.89
5024 7385 7.808381 AGGAACGATGACAATACAATACTATCG 59.192 37.037 0.00 0.00 41.16 2.92
5034 7395 8.697067 ACAATACAATACTATCGCGTAAACATC 58.303 33.333 5.77 0.00 0.00 3.06
5053 7414 8.801715 AAACATCAACAGATGAATGTAAACAC 57.198 30.769 12.02 0.00 42.54 3.32
5080 7441 4.142038 AGTTAGGTGCGTCAAAAAGGAAT 58.858 39.130 0.00 0.00 0.00 3.01
5081 7442 5.310451 AGTTAGGTGCGTCAAAAAGGAATA 58.690 37.500 0.00 0.00 0.00 1.75
5082 7443 5.180680 AGTTAGGTGCGTCAAAAAGGAATAC 59.819 40.000 0.00 0.00 0.00 1.89
5083 7444 3.751518 AGGTGCGTCAAAAAGGAATACT 58.248 40.909 0.00 0.00 0.00 2.12
5084 7445 4.901868 AGGTGCGTCAAAAAGGAATACTA 58.098 39.130 0.00 0.00 0.00 1.82
5085 7446 5.310451 AGGTGCGTCAAAAAGGAATACTAA 58.690 37.500 0.00 0.00 0.00 2.24
5086 7447 5.411669 AGGTGCGTCAAAAAGGAATACTAAG 59.588 40.000 0.00 0.00 0.00 2.18
5087 7448 5.180680 GGTGCGTCAAAAAGGAATACTAAGT 59.819 40.000 0.00 0.00 0.00 2.24
5088 7449 6.369615 GGTGCGTCAAAAAGGAATACTAAGTA 59.630 38.462 0.00 0.00 0.00 2.24
5089 7450 7.095102 GGTGCGTCAAAAAGGAATACTAAGTAA 60.095 37.037 0.00 0.00 0.00 2.24
5090 7451 8.284693 GTGCGTCAAAAAGGAATACTAAGTAAA 58.715 33.333 0.00 0.00 0.00 2.01
5091 7452 8.838365 TGCGTCAAAAAGGAATACTAAGTAAAA 58.162 29.630 0.00 0.00 0.00 1.52
5092 7453 9.836076 GCGTCAAAAAGGAATACTAAGTAAAAT 57.164 29.630 0.00 0.00 0.00 1.82
5106 7467 8.203681 ACTAAGTAAAATGACTTACAGAGGGT 57.796 34.615 0.00 0.00 40.22 4.34
5107 7468 8.657712 ACTAAGTAAAATGACTTACAGAGGGTT 58.342 33.333 0.00 0.00 40.22 4.11
5109 7470 8.843885 AAGTAAAATGACTTACAGAGGGTTAC 57.156 34.615 0.00 0.00 37.90 2.50
5110 7471 7.095270 AGTAAAATGACTTACAGAGGGTTACG 58.905 38.462 0.00 0.00 34.75 3.18
5111 7472 5.733620 AAATGACTTACAGAGGGTTACGA 57.266 39.130 0.00 0.00 0.00 3.43
5112 7473 5.733620 AATGACTTACAGAGGGTTACGAA 57.266 39.130 0.00 0.00 0.00 3.85
5113 7474 4.510038 TGACTTACAGAGGGTTACGAAC 57.490 45.455 0.00 0.00 0.00 3.95
5114 7475 4.147321 TGACTTACAGAGGGTTACGAACT 58.853 43.478 0.00 0.00 0.00 3.01
5115 7476 4.586001 TGACTTACAGAGGGTTACGAACTT 59.414 41.667 0.00 0.00 0.00 2.66
5116 7477 4.879598 ACTTACAGAGGGTTACGAACTTG 58.120 43.478 0.00 0.00 0.00 3.16
5117 7478 2.165319 ACAGAGGGTTACGAACTTGC 57.835 50.000 0.00 0.00 0.00 4.01
5118 7479 1.692519 ACAGAGGGTTACGAACTTGCT 59.307 47.619 0.00 0.00 0.00 3.91
5119 7480 2.895404 ACAGAGGGTTACGAACTTGCTA 59.105 45.455 0.00 0.00 0.00 3.49
5120 7481 3.056749 ACAGAGGGTTACGAACTTGCTAG 60.057 47.826 0.00 0.00 0.00 3.42
5121 7482 2.094130 AGAGGGTTACGAACTTGCTAGC 60.094 50.000 8.10 8.10 0.00 3.42
5122 7483 1.066358 AGGGTTACGAACTTGCTAGCC 60.066 52.381 13.29 0.00 0.00 3.93
5123 7484 1.066358 GGGTTACGAACTTGCTAGCCT 60.066 52.381 13.29 0.00 0.00 4.58
5124 7485 2.614734 GGGTTACGAACTTGCTAGCCTT 60.615 50.000 13.29 0.21 0.00 4.35
5125 7486 2.671888 GGTTACGAACTTGCTAGCCTTC 59.328 50.000 13.29 9.28 0.00 3.46
5126 7487 2.667473 TACGAACTTGCTAGCCTTCC 57.333 50.000 13.29 0.00 0.00 3.46
5127 7488 0.685097 ACGAACTTGCTAGCCTTCCA 59.315 50.000 13.29 0.00 0.00 3.53
5128 7489 1.071699 ACGAACTTGCTAGCCTTCCAA 59.928 47.619 13.29 0.00 0.00 3.53
5129 7490 2.151202 CGAACTTGCTAGCCTTCCAAA 58.849 47.619 13.29 0.00 0.00 3.28
5130 7491 2.749621 CGAACTTGCTAGCCTTCCAAAT 59.250 45.455 13.29 0.00 0.00 2.32
5131 7492 3.191371 CGAACTTGCTAGCCTTCCAAATT 59.809 43.478 13.29 0.00 0.00 1.82
5132 7493 4.394920 CGAACTTGCTAGCCTTCCAAATTA 59.605 41.667 13.29 0.00 0.00 1.40
5133 7494 5.447818 CGAACTTGCTAGCCTTCCAAATTAG 60.448 44.000 13.29 0.00 0.00 1.73
5134 7495 3.696548 ACTTGCTAGCCTTCCAAATTAGC 59.303 43.478 13.29 0.00 37.75 3.09
5135 7496 2.654863 TGCTAGCCTTCCAAATTAGCC 58.345 47.619 13.29 0.00 36.72 3.93
5136 7497 1.604278 GCTAGCCTTCCAAATTAGCCG 59.396 52.381 2.29 0.00 32.58 5.52
5137 7498 2.919228 CTAGCCTTCCAAATTAGCCGT 58.081 47.619 0.00 0.00 0.00 5.68
5138 7499 2.215942 AGCCTTCCAAATTAGCCGTT 57.784 45.000 0.00 0.00 0.00 4.44
5139 7500 2.092323 AGCCTTCCAAATTAGCCGTTC 58.908 47.619 0.00 0.00 0.00 3.95
5140 7501 1.134367 GCCTTCCAAATTAGCCGTTCC 59.866 52.381 0.00 0.00 0.00 3.62
5141 7502 2.723273 CCTTCCAAATTAGCCGTTCCT 58.277 47.619 0.00 0.00 0.00 3.36
5142 7503 3.881220 CCTTCCAAATTAGCCGTTCCTA 58.119 45.455 0.00 0.00 0.00 2.94
5143 7504 4.461198 CCTTCCAAATTAGCCGTTCCTAT 58.539 43.478 0.00 0.00 0.00 2.57
5144 7505 5.617252 CCTTCCAAATTAGCCGTTCCTATA 58.383 41.667 0.00 0.00 0.00 1.31
5145 7506 6.059484 CCTTCCAAATTAGCCGTTCCTATAA 58.941 40.000 0.00 0.00 0.00 0.98
5146 7507 6.017357 CCTTCCAAATTAGCCGTTCCTATAAC 60.017 42.308 0.00 0.00 0.00 1.89
5147 7508 5.991861 TCCAAATTAGCCGTTCCTATAACA 58.008 37.500 0.00 0.00 0.00 2.41
5148 7509 6.416415 TCCAAATTAGCCGTTCCTATAACAA 58.584 36.000 0.00 0.00 0.00 2.83
5149 7510 6.540914 TCCAAATTAGCCGTTCCTATAACAAG 59.459 38.462 0.00 0.00 0.00 3.16
5150 7511 6.317893 CCAAATTAGCCGTTCCTATAACAAGT 59.682 38.462 0.00 0.00 0.00 3.16
5151 7512 7.496591 CCAAATTAGCCGTTCCTATAACAAGTA 59.503 37.037 0.00 0.00 0.00 2.24
5152 7513 8.885722 CAAATTAGCCGTTCCTATAACAAGTAA 58.114 33.333 0.00 0.00 0.00 2.24
5153 7514 8.429493 AATTAGCCGTTCCTATAACAAGTAAC 57.571 34.615 0.00 0.00 0.00 2.50
5154 7515 5.410355 AGCCGTTCCTATAACAAGTAACA 57.590 39.130 0.00 0.00 0.00 2.41
5155 7516 5.985911 AGCCGTTCCTATAACAAGTAACAT 58.014 37.500 0.00 0.00 0.00 2.71
5156 7517 7.116075 AGCCGTTCCTATAACAAGTAACATA 57.884 36.000 0.00 0.00 0.00 2.29
5157 7518 7.558604 AGCCGTTCCTATAACAAGTAACATAA 58.441 34.615 0.00 0.00 0.00 1.90
5158 7519 7.709613 AGCCGTTCCTATAACAAGTAACATAAG 59.290 37.037 0.00 0.00 0.00 1.73
5159 7520 7.517893 GCCGTTCCTATAACAAGTAACATAAGC 60.518 40.741 0.00 0.00 0.00 3.09
5160 7521 7.493320 CCGTTCCTATAACAAGTAACATAAGCA 59.507 37.037 0.00 0.00 0.00 3.91
5161 7522 8.540492 CGTTCCTATAACAAGTAACATAAGCAG 58.460 37.037 0.00 0.00 0.00 4.24
5162 7523 9.595823 GTTCCTATAACAAGTAACATAAGCAGA 57.404 33.333 0.00 0.00 0.00 4.26
5213 7574 9.014297 AGAAATTCTGAAACTATACCAAAGTGG 57.986 33.333 0.00 0.00 45.02 4.00
5214 7575 6.759497 ATTCTGAAACTATACCAAAGTGGC 57.241 37.500 0.00 0.00 42.67 5.01
5215 7576 5.235850 TCTGAAACTATACCAAAGTGGCA 57.764 39.130 0.00 0.00 42.67 4.92
5216 7577 5.815581 TCTGAAACTATACCAAAGTGGCAT 58.184 37.500 0.00 0.00 42.67 4.40
5217 7578 5.647658 TCTGAAACTATACCAAAGTGGCATG 59.352 40.000 0.00 0.00 42.67 4.06
5218 7579 5.321102 TGAAACTATACCAAAGTGGCATGT 58.679 37.500 0.00 0.00 42.67 3.21
5219 7580 5.772672 TGAAACTATACCAAAGTGGCATGTT 59.227 36.000 0.00 0.00 42.67 2.71
5220 7581 6.943146 TGAAACTATACCAAAGTGGCATGTTA 59.057 34.615 0.00 0.00 42.67 2.41
5221 7582 7.613801 TGAAACTATACCAAAGTGGCATGTTAT 59.386 33.333 0.00 0.00 42.67 1.89
5222 7583 9.116067 GAAACTATACCAAAGTGGCATGTTATA 57.884 33.333 0.00 0.00 42.67 0.98
5223 7584 9.469097 AAACTATACCAAAGTGGCATGTTATAA 57.531 29.630 0.00 0.00 42.67 0.98
5224 7585 9.469097 AACTATACCAAAGTGGCATGTTATAAA 57.531 29.630 0.00 0.00 42.67 1.40
5225 7586 9.120538 ACTATACCAAAGTGGCATGTTATAAAG 57.879 33.333 0.00 0.00 42.67 1.85
5226 7587 9.337396 CTATACCAAAGTGGCATGTTATAAAGA 57.663 33.333 0.00 0.00 42.67 2.52
5227 7588 6.909550 ACCAAAGTGGCATGTTATAAAGAA 57.090 33.333 0.00 0.00 42.67 2.52
5228 7589 6.924111 ACCAAAGTGGCATGTTATAAAGAAG 58.076 36.000 0.00 0.00 42.67 2.85
5229 7590 6.719370 ACCAAAGTGGCATGTTATAAAGAAGA 59.281 34.615 0.00 0.00 42.67 2.87
5230 7591 7.232534 ACCAAAGTGGCATGTTATAAAGAAGAA 59.767 33.333 0.00 0.00 42.67 2.52
5231 7592 7.756722 CCAAAGTGGCATGTTATAAAGAAGAAG 59.243 37.037 0.00 0.00 0.00 2.85
5232 7593 8.299570 CAAAGTGGCATGTTATAAAGAAGAAGT 58.700 33.333 0.00 0.00 0.00 3.01
5233 7594 8.409358 AAGTGGCATGTTATAAAGAAGAAGTT 57.591 30.769 0.00 0.00 0.00 2.66
5234 7595 8.045176 AGTGGCATGTTATAAAGAAGAAGTTC 57.955 34.615 0.00 0.00 0.00 3.01
5235 7596 7.885399 AGTGGCATGTTATAAAGAAGAAGTTCT 59.115 33.333 0.00 0.00 45.56 3.01
5236 7597 8.178313 GTGGCATGTTATAAAGAAGAAGTTCTC 58.822 37.037 5.70 0.20 42.59 2.87
5237 7598 7.882791 TGGCATGTTATAAAGAAGAAGTTCTCA 59.117 33.333 5.70 0.00 42.59 3.27
5238 7599 8.730680 GGCATGTTATAAAGAAGAAGTTCTCAA 58.269 33.333 5.70 0.00 42.59 3.02
5239 7600 9.766277 GCATGTTATAAAGAAGAAGTTCTCAAG 57.234 33.333 5.70 0.00 42.59 3.02
5242 7603 9.273016 TGTTATAAAGAAGAAGTTCTCAAGGTG 57.727 33.333 5.70 0.00 42.59 4.00
5243 7604 9.274206 GTTATAAAGAAGAAGTTCTCAAGGTGT 57.726 33.333 5.70 0.00 42.59 4.16
5244 7605 7.736447 ATAAAGAAGAAGTTCTCAAGGTGTG 57.264 36.000 5.70 0.00 42.59 3.82
5245 7606 4.762289 AGAAGAAGTTCTCAAGGTGTGT 57.238 40.909 5.70 0.00 38.84 3.72
5246 7607 4.446371 AGAAGAAGTTCTCAAGGTGTGTG 58.554 43.478 5.70 0.00 38.84 3.82
5247 7608 4.162320 AGAAGAAGTTCTCAAGGTGTGTGA 59.838 41.667 5.70 0.00 38.84 3.58
5248 7609 4.487714 AGAAGTTCTCAAGGTGTGTGAA 57.512 40.909 0.00 0.00 37.39 3.18
5249 7610 4.843728 AGAAGTTCTCAAGGTGTGTGAAA 58.156 39.130 0.00 0.00 40.46 2.69
5250 7611 4.878397 AGAAGTTCTCAAGGTGTGTGAAAG 59.122 41.667 0.00 0.00 40.46 2.62
5251 7612 2.945668 AGTTCTCAAGGTGTGTGAAAGC 59.054 45.455 0.00 0.00 40.46 3.51
5252 7613 2.682856 GTTCTCAAGGTGTGTGAAAGCA 59.317 45.455 0.00 0.00 40.46 3.91
5253 7614 2.288666 TCTCAAGGTGTGTGAAAGCAC 58.711 47.619 0.00 0.00 45.35 4.40
5254 7615 2.092968 TCTCAAGGTGTGTGAAAGCACT 60.093 45.455 0.00 0.00 45.36 4.40
5255 7616 2.684881 CTCAAGGTGTGTGAAAGCACTT 59.315 45.455 0.00 0.00 45.36 3.16
5256 7617 2.423185 TCAAGGTGTGTGAAAGCACTTG 59.577 45.455 0.00 0.00 45.36 3.16
5257 7618 1.392589 AGGTGTGTGAAAGCACTTGG 58.607 50.000 0.00 0.00 45.36 3.61
5258 7619 1.064758 AGGTGTGTGAAAGCACTTGGA 60.065 47.619 0.00 0.00 45.36 3.53
5259 7620 1.748493 GGTGTGTGAAAGCACTTGGAA 59.252 47.619 0.00 0.00 45.36 3.53
5260 7621 2.362077 GGTGTGTGAAAGCACTTGGAAT 59.638 45.455 0.00 0.00 45.36 3.01
5261 7622 3.568007 GGTGTGTGAAAGCACTTGGAATA 59.432 43.478 0.00 0.00 45.36 1.75
5262 7623 4.320494 GGTGTGTGAAAGCACTTGGAATAG 60.320 45.833 0.00 0.00 45.36 1.73
5263 7624 4.515191 GTGTGTGAAAGCACTTGGAATAGA 59.485 41.667 0.00 0.00 45.36 1.98
5264 7625 5.182001 GTGTGTGAAAGCACTTGGAATAGAT 59.818 40.000 0.00 0.00 45.36 1.98
5265 7626 6.371548 GTGTGTGAAAGCACTTGGAATAGATA 59.628 38.462 0.00 0.00 45.36 1.98
5266 7627 6.939730 TGTGTGAAAGCACTTGGAATAGATAA 59.060 34.615 0.00 0.00 45.36 1.75
5267 7628 7.094805 TGTGTGAAAGCACTTGGAATAGATAAC 60.095 37.037 0.00 0.00 45.36 1.89
5268 7629 6.374333 TGTGAAAGCACTTGGAATAGATAACC 59.626 38.462 0.00 0.00 45.36 2.85
5269 7630 6.599638 GTGAAAGCACTTGGAATAGATAACCT 59.400 38.462 0.00 0.00 41.84 3.50
5270 7631 7.121315 GTGAAAGCACTTGGAATAGATAACCTT 59.879 37.037 0.00 0.00 41.84 3.50
5271 7632 7.669722 TGAAAGCACTTGGAATAGATAACCTTT 59.330 33.333 0.00 0.00 0.00 3.11
5272 7633 8.422577 AAAGCACTTGGAATAGATAACCTTTT 57.577 30.769 0.00 0.00 0.00 2.27
5273 7634 9.528489 AAAGCACTTGGAATAGATAACCTTTTA 57.472 29.630 0.00 0.00 0.00 1.52
5274 7635 8.738645 AGCACTTGGAATAGATAACCTTTTAG 57.261 34.615 0.00 0.00 0.00 1.85
5275 7636 8.548877 AGCACTTGGAATAGATAACCTTTTAGA 58.451 33.333 0.00 0.00 0.00 2.10
5276 7637 9.343539 GCACTTGGAATAGATAACCTTTTAGAT 57.656 33.333 0.00 0.00 0.00 1.98
5278 7639 9.853177 ACTTGGAATAGATAACCTTTTAGATGG 57.147 33.333 0.00 0.00 0.00 3.51
5279 7640 9.853177 CTTGGAATAGATAACCTTTTAGATGGT 57.147 33.333 0.00 0.00 38.35 3.55
5280 7641 9.627123 TTGGAATAGATAACCTTTTAGATGGTG 57.373 33.333 0.00 0.00 36.57 4.17
5281 7642 8.998814 TGGAATAGATAACCTTTTAGATGGTGA 58.001 33.333 0.00 0.00 36.57 4.02
5282 7643 9.274206 GGAATAGATAACCTTTTAGATGGTGAC 57.726 37.037 0.00 0.00 36.57 3.67
5284 7645 9.838339 AATAGATAACCTTTTAGATGGTGACTG 57.162 33.333 0.00 0.00 36.57 3.51
5285 7646 6.653989 AGATAACCTTTTAGATGGTGACTGG 58.346 40.000 0.00 0.00 36.57 4.00
5286 7647 3.073274 ACCTTTTAGATGGTGACTGGC 57.927 47.619 0.00 0.00 34.90 4.85
5287 7648 2.644798 ACCTTTTAGATGGTGACTGGCT 59.355 45.455 0.00 0.00 34.90 4.75
5288 7649 3.074538 ACCTTTTAGATGGTGACTGGCTT 59.925 43.478 0.00 0.00 34.90 4.35
5289 7650 3.441572 CCTTTTAGATGGTGACTGGCTTG 59.558 47.826 0.00 0.00 0.00 4.01
5290 7651 2.787473 TTAGATGGTGACTGGCTTGG 57.213 50.000 0.00 0.00 0.00 3.61
5291 7652 0.253044 TAGATGGTGACTGGCTTGGC 59.747 55.000 0.00 0.00 0.00 4.52
5292 7653 1.001641 GATGGTGACTGGCTTGGCT 60.002 57.895 0.00 0.00 0.00 4.75
5293 7654 0.610232 GATGGTGACTGGCTTGGCTT 60.610 55.000 0.00 0.00 0.00 4.35
5294 7655 0.896940 ATGGTGACTGGCTTGGCTTG 60.897 55.000 0.00 0.00 0.00 4.01
5295 7656 1.529244 GGTGACTGGCTTGGCTTGT 60.529 57.895 0.00 0.00 0.00 3.16
5296 7657 1.518903 GGTGACTGGCTTGGCTTGTC 61.519 60.000 11.38 11.38 33.95 3.18
5297 7658 0.819259 GTGACTGGCTTGGCTTGTCA 60.819 55.000 14.86 14.86 37.93 3.58
5298 7659 0.106769 TGACTGGCTTGGCTTGTCAA 60.107 50.000 15.85 0.00 37.60 3.18
5299 7660 0.312102 GACTGGCTTGGCTTGTCAAC 59.688 55.000 12.64 0.00 33.72 3.18
5300 7661 0.395586 ACTGGCTTGGCTTGTCAACA 60.396 50.000 0.00 0.00 0.00 3.33
5301 7662 0.963962 CTGGCTTGGCTTGTCAACAT 59.036 50.000 0.00 0.00 0.00 2.71
5302 7663 1.342174 CTGGCTTGGCTTGTCAACATT 59.658 47.619 0.00 0.00 0.00 2.71
5303 7664 1.068895 TGGCTTGGCTTGTCAACATTG 59.931 47.619 0.00 0.00 0.00 2.82
5304 7665 1.340889 GGCTTGGCTTGTCAACATTGA 59.659 47.619 0.00 0.00 34.20 2.57
5305 7666 2.028748 GGCTTGGCTTGTCAACATTGAT 60.029 45.455 0.00 0.00 39.73 2.57
5306 7667 2.991190 GCTTGGCTTGTCAACATTGATG 59.009 45.455 0.00 0.00 39.73 3.07
5307 7668 3.581755 CTTGGCTTGTCAACATTGATGG 58.418 45.455 0.00 0.00 39.73 3.51
5308 7669 1.894466 TGGCTTGTCAACATTGATGGG 59.106 47.619 0.00 0.00 39.73 4.00
5309 7670 1.895131 GGCTTGTCAACATTGATGGGT 59.105 47.619 0.00 0.00 39.73 4.51
5310 7671 2.353011 GGCTTGTCAACATTGATGGGTG 60.353 50.000 0.00 0.00 39.73 4.61
5311 7672 2.927871 GCTTGTCAACATTGATGGGTGC 60.928 50.000 0.00 0.00 39.73 5.01
5312 7673 1.992538 TGTCAACATTGATGGGTGCA 58.007 45.000 0.00 0.00 39.73 4.57
5313 7674 2.527497 TGTCAACATTGATGGGTGCAT 58.473 42.857 0.00 0.00 39.73 3.96
5314 7675 2.492881 TGTCAACATTGATGGGTGCATC 59.507 45.455 0.00 0.00 39.73 3.91
5315 7676 2.101783 TCAACATTGATGGGTGCATCC 58.898 47.619 9.82 9.82 31.01 3.51
5316 7677 1.826096 CAACATTGATGGGTGCATCCA 59.174 47.619 23.77 23.77 41.60 3.41
5318 7679 3.598693 ACATTGATGGGTGCATCCATA 57.401 42.857 31.44 17.72 46.67 2.74
5319 7680 3.913509 ACATTGATGGGTGCATCCATAA 58.086 40.909 31.44 22.50 46.67 1.90
5320 7681 3.893200 ACATTGATGGGTGCATCCATAAG 59.107 43.478 31.44 21.43 46.67 1.73
5321 7682 3.949586 TTGATGGGTGCATCCATAAGA 57.050 42.857 31.44 16.83 46.67 2.10
5322 7683 4.458256 TTGATGGGTGCATCCATAAGAT 57.542 40.909 31.44 10.56 46.67 2.40
5323 7684 4.025040 TGATGGGTGCATCCATAAGATC 57.975 45.455 31.44 19.67 46.67 2.75
5324 7685 2.957402 TGGGTGCATCCATAAGATCC 57.043 50.000 16.81 0.00 38.11 3.36
5325 7686 2.134354 TGGGTGCATCCATAAGATCCA 58.866 47.619 16.81 0.00 38.11 3.41
5326 7687 2.718062 TGGGTGCATCCATAAGATCCAT 59.282 45.455 16.81 0.00 38.11 3.41
5327 7688 3.140707 TGGGTGCATCCATAAGATCCATT 59.859 43.478 16.81 0.00 38.11 3.16
5328 7689 3.508793 GGGTGCATCCATAAGATCCATTG 59.491 47.826 12.38 0.00 38.11 2.82
5329 7690 4.147321 GGTGCATCCATAAGATCCATTGT 58.853 43.478 0.00 0.00 35.97 2.71
5330 7691 5.316167 GGTGCATCCATAAGATCCATTGTA 58.684 41.667 0.00 0.00 35.97 2.41
5331 7692 5.948162 GGTGCATCCATAAGATCCATTGTAT 59.052 40.000 0.00 0.00 35.97 2.29
5332 7693 6.094603 GGTGCATCCATAAGATCCATTGTATC 59.905 42.308 0.00 0.00 35.97 2.24
5333 7694 6.883217 GTGCATCCATAAGATCCATTGTATCT 59.117 38.462 0.00 0.00 35.17 1.98
5334 7695 7.065563 GTGCATCCATAAGATCCATTGTATCTC 59.934 40.741 0.00 0.00 32.48 2.75
5335 7696 6.257411 GCATCCATAAGATCCATTGTATCTCG 59.743 42.308 0.00 0.00 32.48 4.04
5336 7697 6.918067 TCCATAAGATCCATTGTATCTCGT 57.082 37.500 0.00 0.00 32.48 4.18
5337 7698 6.925211 TCCATAAGATCCATTGTATCTCGTC 58.075 40.000 0.00 0.00 32.48 4.20
5338 7699 6.721668 TCCATAAGATCCATTGTATCTCGTCT 59.278 38.462 0.00 0.00 32.48 4.18
5339 7700 7.233553 TCCATAAGATCCATTGTATCTCGTCTT 59.766 37.037 0.00 0.00 32.48 3.01
5340 7701 7.330454 CCATAAGATCCATTGTATCTCGTCTTG 59.670 40.741 0.00 0.00 32.48 3.02
5341 7702 4.626042 AGATCCATTGTATCTCGTCTTGC 58.374 43.478 0.00 0.00 0.00 4.01
5342 7703 3.885724 TCCATTGTATCTCGTCTTGCA 57.114 42.857 0.00 0.00 0.00 4.08
5343 7704 4.406648 TCCATTGTATCTCGTCTTGCAT 57.593 40.909 0.00 0.00 0.00 3.96
5344 7705 4.122046 TCCATTGTATCTCGTCTTGCATG 58.878 43.478 0.00 0.00 0.00 4.06
5345 7706 3.303593 CCATTGTATCTCGTCTTGCATGC 60.304 47.826 11.82 11.82 0.00 4.06
5346 7707 2.967599 TGTATCTCGTCTTGCATGCT 57.032 45.000 20.33 0.00 0.00 3.79
5347 7708 2.814269 TGTATCTCGTCTTGCATGCTC 58.186 47.619 20.33 6.01 0.00 4.26
5348 7709 2.428530 TGTATCTCGTCTTGCATGCTCT 59.571 45.455 20.33 0.00 0.00 4.09
5349 7710 1.937278 ATCTCGTCTTGCATGCTCTG 58.063 50.000 20.33 8.92 0.00 3.35
5363 7724 3.293311 TGCTCTGCAGATTTGAAAAGC 57.707 42.857 18.63 14.73 33.32 3.51
5364 7725 2.624364 TGCTCTGCAGATTTGAAAAGCA 59.376 40.909 18.63 17.26 33.72 3.91
5367 7728 2.334838 CTGCAGATTTGAAAAGCAGGC 58.665 47.619 8.42 8.32 46.55 4.85
5368 7729 1.687660 TGCAGATTTGAAAAGCAGGCA 59.312 42.857 6.38 6.38 35.54 4.75
5369 7730 2.288579 TGCAGATTTGAAAAGCAGGCAG 60.289 45.455 6.38 0.00 33.90 4.85
5370 7731 2.929592 GCAGATTTGAAAAGCAGGCAGG 60.930 50.000 0.00 0.00 30.63 4.85
5371 7732 1.274447 AGATTTGAAAAGCAGGCAGGC 59.726 47.619 0.00 0.00 0.00 4.85
5372 7733 1.001181 GATTTGAAAAGCAGGCAGGCA 59.999 47.619 0.00 0.00 35.83 4.75
5373 7734 1.050204 TTTGAAAAGCAGGCAGGCAT 58.950 45.000 0.00 0.00 35.83 4.40
5374 7735 1.050204 TTGAAAAGCAGGCAGGCATT 58.950 45.000 0.00 0.00 35.83 3.56
5375 7736 1.050204 TGAAAAGCAGGCAGGCATTT 58.950 45.000 4.45 4.45 37.39 2.32
5376 7737 1.001181 TGAAAAGCAGGCAGGCATTTC 59.999 47.619 18.62 18.62 46.21 2.17
5377 7738 0.037975 AAAAGCAGGCAGGCATTTCG 60.038 50.000 0.00 0.00 29.59 3.46
5378 7739 1.181098 AAAGCAGGCAGGCATTTCGT 61.181 50.000 0.00 0.00 35.83 3.85
5379 7740 1.870055 AAGCAGGCAGGCATTTCGTG 61.870 55.000 0.00 0.00 35.83 4.35
5380 7741 2.879907 CAGGCAGGCATTTCGTGG 59.120 61.111 0.00 0.00 0.00 4.94
5381 7742 1.675310 CAGGCAGGCATTTCGTGGA 60.675 57.895 0.00 0.00 0.00 4.02
5382 7743 1.074775 AGGCAGGCATTTCGTGGAA 59.925 52.632 0.00 0.00 0.00 3.53
5383 7744 1.212751 GGCAGGCATTTCGTGGAAC 59.787 57.895 0.00 0.00 0.00 3.62
5384 7745 1.523154 GGCAGGCATTTCGTGGAACA 61.523 55.000 0.00 0.00 35.74 3.18
5385 7746 0.109597 GCAGGCATTTCGTGGAACAG 60.110 55.000 0.00 0.00 41.80 3.16
5386 7747 0.109597 CAGGCATTTCGTGGAACAGC 60.110 55.000 0.00 0.00 41.80 4.40
5387 7748 0.250901 AGGCATTTCGTGGAACAGCT 60.251 50.000 0.00 0.00 41.80 4.24
5388 7749 1.003118 AGGCATTTCGTGGAACAGCTA 59.997 47.619 0.00 0.00 41.80 3.32
5389 7750 1.398390 GGCATTTCGTGGAACAGCTAG 59.602 52.381 0.00 0.00 41.80 3.42
5390 7751 2.076863 GCATTTCGTGGAACAGCTAGT 58.923 47.619 0.00 0.00 41.80 2.57
5391 7752 2.159653 GCATTTCGTGGAACAGCTAGTG 60.160 50.000 0.00 0.00 41.80 2.74
5392 7753 2.902705 TTTCGTGGAACAGCTAGTGT 57.097 45.000 0.00 0.00 41.80 3.55
5393 7754 2.148916 TTCGTGGAACAGCTAGTGTG 57.851 50.000 0.00 0.00 41.80 3.82
5394 7755 0.319555 TCGTGGAACAGCTAGTGTGC 60.320 55.000 0.00 0.00 41.80 4.57
5395 7756 0.599991 CGTGGAACAGCTAGTGTGCA 60.600 55.000 5.98 0.00 41.80 4.57
5396 7757 1.151668 GTGGAACAGCTAGTGTGCAG 58.848 55.000 0.00 0.00 41.80 4.41
5397 7758 0.035317 TGGAACAGCTAGTGTGCAGG 59.965 55.000 0.00 0.00 40.26 4.85
5398 7759 0.321671 GGAACAGCTAGTGTGCAGGA 59.678 55.000 0.00 0.00 40.26 3.86
5399 7760 1.270839 GGAACAGCTAGTGTGCAGGAA 60.271 52.381 0.00 0.00 40.26 3.36
5400 7761 1.801178 GAACAGCTAGTGTGCAGGAAC 59.199 52.381 0.00 0.00 40.26 3.62
5401 7762 0.758734 ACAGCTAGTGTGCAGGAACA 59.241 50.000 0.00 0.00 38.28 3.18
5402 7763 1.349026 ACAGCTAGTGTGCAGGAACAT 59.651 47.619 0.00 0.00 38.28 2.71
5403 7764 2.567169 ACAGCTAGTGTGCAGGAACATA 59.433 45.455 0.00 0.00 38.28 2.29
5404 7765 3.193263 CAGCTAGTGTGCAGGAACATAG 58.807 50.000 0.00 0.00 34.99 2.23
5405 7766 1.936547 GCTAGTGTGCAGGAACATAGC 59.063 52.381 0.00 0.00 33.84 2.97
5406 7767 2.419297 GCTAGTGTGCAGGAACATAGCT 60.419 50.000 11.45 0.00 35.98 3.32
5407 7768 2.393271 AGTGTGCAGGAACATAGCTC 57.607 50.000 0.00 0.00 31.49 4.09
5408 7769 1.002366 GTGTGCAGGAACATAGCTCG 58.998 55.000 0.00 0.00 31.49 5.03
5409 7770 0.740868 TGTGCAGGAACATAGCTCGC 60.741 55.000 0.00 0.00 0.00 5.03
5410 7771 1.519234 TGCAGGAACATAGCTCGCG 60.519 57.895 0.00 0.00 0.00 5.87
5411 7772 1.519455 GCAGGAACATAGCTCGCGT 60.519 57.895 5.77 0.00 0.00 6.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.523558 TGAACAACCAAAGCATCATCATGA 59.476 37.500 0.00 0.00 30.57 3.07
1 2 4.811908 TGAACAACCAAAGCATCATCATG 58.188 39.130 0.00 0.00 0.00 3.07
2 3 4.081862 CCTGAACAACCAAAGCATCATCAT 60.082 41.667 0.00 0.00 0.00 2.45
3 4 3.256383 CCTGAACAACCAAAGCATCATCA 59.744 43.478 0.00 0.00 0.00 3.07
4 5 3.841643 CCTGAACAACCAAAGCATCATC 58.158 45.455 0.00 0.00 0.00 2.92
5 6 2.028748 GCCTGAACAACCAAAGCATCAT 60.029 45.455 0.00 0.00 0.00 2.45
6 7 1.340889 GCCTGAACAACCAAAGCATCA 59.659 47.619 0.00 0.00 0.00 3.07
7 8 1.615392 AGCCTGAACAACCAAAGCATC 59.385 47.619 0.00 0.00 0.00 3.91
8 9 1.708341 AGCCTGAACAACCAAAGCAT 58.292 45.000 0.00 0.00 0.00 3.79
9 10 1.484038 AAGCCTGAACAACCAAAGCA 58.516 45.000 0.00 0.00 0.00 3.91
10 11 2.159114 TGAAAGCCTGAACAACCAAAGC 60.159 45.455 0.00 0.00 0.00 3.51
11 12 3.799281 TGAAAGCCTGAACAACCAAAG 57.201 42.857 0.00 0.00 0.00 2.77
12 13 4.751767 ATTGAAAGCCTGAACAACCAAA 57.248 36.364 0.00 0.00 0.00 3.28
13 14 4.442753 GGAATTGAAAGCCTGAACAACCAA 60.443 41.667 0.00 0.00 0.00 3.67
14 15 3.069443 GGAATTGAAAGCCTGAACAACCA 59.931 43.478 0.00 0.00 0.00 3.67
15 16 3.069443 TGGAATTGAAAGCCTGAACAACC 59.931 43.478 0.00 0.00 0.00 3.77
16 17 4.051237 GTGGAATTGAAAGCCTGAACAAC 58.949 43.478 0.00 0.00 0.00 3.32
17 18 3.960102 AGTGGAATTGAAAGCCTGAACAA 59.040 39.130 0.00 0.00 0.00 2.83
18 19 3.318839 CAGTGGAATTGAAAGCCTGAACA 59.681 43.478 0.00 0.00 0.00 3.18
19 20 3.858503 GCAGTGGAATTGAAAGCCTGAAC 60.859 47.826 0.00 0.00 0.00 3.18
20 21 2.297033 GCAGTGGAATTGAAAGCCTGAA 59.703 45.455 0.00 0.00 0.00 3.02
21 22 1.888512 GCAGTGGAATTGAAAGCCTGA 59.111 47.619 0.00 0.00 0.00 3.86
22 23 1.067354 GGCAGTGGAATTGAAAGCCTG 60.067 52.381 0.00 0.00 37.67 4.85
23 24 1.203100 AGGCAGTGGAATTGAAAGCCT 60.203 47.619 0.00 0.00 45.49 4.58
24 25 1.203287 GAGGCAGTGGAATTGAAAGCC 59.797 52.381 0.00 0.00 40.85 4.35
25 26 1.888512 TGAGGCAGTGGAATTGAAAGC 59.111 47.619 0.00 0.00 0.00 3.51
26 27 4.015084 AGATGAGGCAGTGGAATTGAAAG 58.985 43.478 0.00 0.00 0.00 2.62
27 28 4.038271 AGATGAGGCAGTGGAATTGAAA 57.962 40.909 0.00 0.00 0.00 2.69
28 29 3.726557 AGATGAGGCAGTGGAATTGAA 57.273 42.857 0.00 0.00 0.00 2.69
29 30 3.726557 AAGATGAGGCAGTGGAATTGA 57.273 42.857 0.00 0.00 0.00 2.57
30 31 3.129988 GGAAAGATGAGGCAGTGGAATTG 59.870 47.826 0.00 0.00 0.00 2.32
31 32 3.011032 AGGAAAGATGAGGCAGTGGAATT 59.989 43.478 0.00 0.00 0.00 2.17
32 33 2.579860 AGGAAAGATGAGGCAGTGGAAT 59.420 45.455 0.00 0.00 0.00 3.01
33 34 1.988107 AGGAAAGATGAGGCAGTGGAA 59.012 47.619 0.00 0.00 0.00 3.53
34 35 1.556911 GAGGAAAGATGAGGCAGTGGA 59.443 52.381 0.00 0.00 0.00 4.02
35 36 1.407989 GGAGGAAAGATGAGGCAGTGG 60.408 57.143 0.00 0.00 0.00 4.00
36 37 1.280133 TGGAGGAAAGATGAGGCAGTG 59.720 52.381 0.00 0.00 0.00 3.66
37 38 1.661463 TGGAGGAAAGATGAGGCAGT 58.339 50.000 0.00 0.00 0.00 4.40
38 39 2.290514 TGTTGGAGGAAAGATGAGGCAG 60.291 50.000 0.00 0.00 0.00 4.85
39 40 1.704628 TGTTGGAGGAAAGATGAGGCA 59.295 47.619 0.00 0.00 0.00 4.75
40 41 2.496899 TGTTGGAGGAAAGATGAGGC 57.503 50.000 0.00 0.00 0.00 4.70
41 42 4.006319 GTCTTGTTGGAGGAAAGATGAGG 58.994 47.826 0.00 0.00 32.85 3.86
42 43 4.904241 AGTCTTGTTGGAGGAAAGATGAG 58.096 43.478 0.00 0.00 32.85 2.90
43 44 4.982241 AGTCTTGTTGGAGGAAAGATGA 57.018 40.909 0.00 0.00 32.85 2.92
44 45 5.368256 CAAGTCTTGTTGGAGGAAAGATG 57.632 43.478 4.27 0.00 32.85 2.90
81 82 4.615949 TCCGTGTTGAATTTTGGTCAATG 58.384 39.130 0.00 0.00 37.34 2.82
111 112 6.857437 ATTCCCAGGTCTTATTGGAAAAAG 57.143 37.500 0.00 0.00 38.50 2.27
138 141 2.428491 ACGCAACGATTAAATGTGGGA 58.572 42.857 0.00 0.00 0.00 4.37
163 166 5.178797 AGATTAAGAACTCATTGTCGGTGG 58.821 41.667 0.00 0.00 0.00 4.61
206 209 7.600752 GCTTGTCTCAAGTTTCTCTGTAGTATT 59.399 37.037 10.49 0.00 0.00 1.89
208 211 6.265649 AGCTTGTCTCAAGTTTCTCTGTAGTA 59.734 38.462 10.49 0.00 0.00 1.82
209 212 5.069781 AGCTTGTCTCAAGTTTCTCTGTAGT 59.930 40.000 10.49 0.00 0.00 2.73
210 213 5.404968 CAGCTTGTCTCAAGTTTCTCTGTAG 59.595 44.000 10.49 0.00 0.00 2.74
211 214 5.292765 CAGCTTGTCTCAAGTTTCTCTGTA 58.707 41.667 10.49 0.00 0.00 2.74
212 215 4.125703 CAGCTTGTCTCAAGTTTCTCTGT 58.874 43.478 10.49 0.00 0.00 3.41
213 216 3.059051 GCAGCTTGTCTCAAGTTTCTCTG 60.059 47.826 10.49 9.39 0.00 3.35
214 217 3.137533 GCAGCTTGTCTCAAGTTTCTCT 58.862 45.455 10.49 0.00 0.00 3.10
215 218 3.137533 AGCAGCTTGTCTCAAGTTTCTC 58.862 45.455 10.49 0.00 0.00 2.87
217 220 3.304324 GGAAGCAGCTTGTCTCAAGTTTC 60.304 47.826 13.91 0.00 0.00 2.78
218 221 2.620585 GGAAGCAGCTTGTCTCAAGTTT 59.379 45.455 13.91 0.00 0.00 2.66
274 295 9.944663 TTTGATGGTATATCTTGTTTATTTCGC 57.055 29.630 0.00 0.00 0.00 4.70
313 358 8.289618 TGAAATAGACTTGAGTTAACATTGCAC 58.710 33.333 8.61 0.00 0.00 4.57
320 365 7.421530 TGCACTGAAATAGACTTGAGTTAAC 57.578 36.000 0.00 0.00 0.00 2.01
373 418 3.931907 TTGACCCCAAGACTCATATGG 57.068 47.619 2.13 0.00 0.00 2.74
434 2322 3.638160 TGTAGGAAGTAACGTGTTGACCT 59.362 43.478 0.00 0.00 0.00 3.85
440 2328 5.287226 CAAGTCTTGTAGGAAGTAACGTGT 58.713 41.667 4.27 0.00 0.00 4.49
443 2331 5.130292 TCCAAGTCTTGTAGGAAGTAACG 57.870 43.478 11.61 0.00 0.00 3.18
444 2332 6.099159 ACTCCAAGTCTTGTAGGAAGTAAC 57.901 41.667 11.61 0.00 0.00 2.50
445 2333 5.836898 TGACTCCAAGTCTTGTAGGAAGTAA 59.163 40.000 11.61 0.00 45.27 2.24
446 2334 5.391256 TGACTCCAAGTCTTGTAGGAAGTA 58.609 41.667 11.61 0.00 45.27 2.24
447 2335 4.223953 TGACTCCAAGTCTTGTAGGAAGT 58.776 43.478 11.61 6.66 45.27 3.01
448 2336 4.873746 TGACTCCAAGTCTTGTAGGAAG 57.126 45.455 11.61 3.89 45.27 3.46
449 2337 5.306937 TCATTGACTCCAAGTCTTGTAGGAA 59.693 40.000 11.61 3.63 45.27 3.36
450 2338 4.838423 TCATTGACTCCAAGTCTTGTAGGA 59.162 41.667 11.61 1.23 45.27 2.94
451 2339 5.152623 TCATTGACTCCAAGTCTTGTAGG 57.847 43.478 11.61 3.97 45.27 3.18
452 2340 8.037758 ACTAATCATTGACTCCAAGTCTTGTAG 58.962 37.037 11.61 7.68 45.27 2.74
453 2341 7.819415 CACTAATCATTGACTCCAAGTCTTGTA 59.181 37.037 11.61 0.00 45.27 2.41
534 2424 5.480642 ACATGGAACCAAATAATGCAACA 57.519 34.783 0.00 0.00 0.00 3.33
543 2433 8.472007 TTTTCAGTTAGTACATGGAACCAAAT 57.528 30.769 0.00 0.00 0.00 2.32
545 2435 6.016610 GCTTTTCAGTTAGTACATGGAACCAA 60.017 38.462 0.00 0.00 0.00 3.67
559 2480 7.079182 TGTTTCTCTTTTCGCTTTTCAGTTA 57.921 32.000 0.00 0.00 0.00 2.24
586 2507 3.326006 TCATGCCTTAAGCCATCCTCTAG 59.674 47.826 0.00 0.00 42.71 2.43
640 2561 8.630037 CCCTATGATTTGTTTGGTAGTATTTCC 58.370 37.037 0.00 0.00 0.00 3.13
721 2644 4.615961 CGTTTCTCCTACGTCTACAACTTG 59.384 45.833 0.00 0.00 34.47 3.16
743 2666 2.028930 GTGCCTACTCATATCTTCCCCG 60.029 54.545 0.00 0.00 0.00 5.73
763 2686 3.637273 GAGGTTCCCACGGCTGGT 61.637 66.667 0.00 0.00 35.46 4.00
764 2687 2.411765 AAAGAGGTTCCCACGGCTGG 62.412 60.000 0.00 0.00 37.29 4.85
765 2688 0.955919 GAAAGAGGTTCCCACGGCTG 60.956 60.000 0.00 0.00 0.00 4.85
766 2689 1.128188 AGAAAGAGGTTCCCACGGCT 61.128 55.000 0.00 0.00 36.86 5.52
817 2765 6.725364 TCTGCCTCTATTTTCTTTCCTCATT 58.275 36.000 0.00 0.00 0.00 2.57
917 2943 3.372206 AGCAGCGTCTCATCAATTGTTAC 59.628 43.478 5.13 0.00 0.00 2.50
1173 3216 2.267006 CTCATCTGCAGCGGTGGT 59.733 61.111 17.54 0.00 0.00 4.16
1332 3375 1.566231 AGGAATGGGAGAGCCGAAAAT 59.434 47.619 0.00 0.00 33.83 1.82
1344 3387 6.131972 AGGTCAATATATGTGAGGAATGGG 57.868 41.667 0.00 0.00 0.00 4.00
1638 3681 5.723672 TGCTTAGCTGTAGAAGTTGTAGT 57.276 39.130 5.60 0.00 0.00 2.73
1672 3715 1.067425 GGTTTTTGGTATCAACCCGCC 60.067 52.381 0.00 0.00 46.16 6.13
1677 3720 5.538849 TTCCAAGGGTTTTTGGTATCAAC 57.461 39.130 4.84 0.00 46.23 3.18
1704 3747 3.690628 GGCGCAAAGTATTTAGTTGGGTA 59.309 43.478 10.83 0.00 35.03 3.69
1823 3866 7.840716 TGAGATTGGTTATGGAGATTGGAATTT 59.159 33.333 0.00 0.00 0.00 1.82
2613 4876 6.500589 TTAGAAAGGATTGGAGGTATGGAG 57.499 41.667 0.00 0.00 0.00 3.86
3672 5944 4.672587 TCCCTGCTGAATGTAGTCATAC 57.327 45.455 0.00 0.00 33.49 2.39
3998 6271 6.887013 ACAGACAGATAGAGATGAATGCTTT 58.113 36.000 0.00 0.00 0.00 3.51
4233 6515 7.093552 TGAGCAGAACTAAGCTATTCTCTTCTT 60.094 37.037 5.13 0.00 42.04 2.52
4267 6549 3.504375 AGATTCCAAGCAAGAAAAGGCT 58.496 40.909 0.00 0.00 43.46 4.58
4490 6784 8.638629 ACTCATCCCGAAGTATATATATAGGC 57.361 38.462 2.53 0.00 0.00 3.93
4556 6863 6.316140 GCAATGGTGATCTTACACTGTATCAA 59.684 38.462 0.00 0.00 40.22 2.57
4581 6888 0.030638 CAGGAAAAACCACAGGCACG 59.969 55.000 0.00 0.00 42.04 5.34
4617 6924 2.621526 AGAACACGGGACACCAATTTTC 59.378 45.455 0.00 0.00 36.13 2.29
4689 6999 5.491982 ACAAGCAACCCACAAAACAAATTA 58.508 33.333 0.00 0.00 0.00 1.40
4763 7091 1.192534 GAGCCGAAAGAAAGTGTCACG 59.807 52.381 0.00 0.00 0.00 4.35
4887 7248 5.713389 TCATCTTCAGTTTCATGCCTTCATT 59.287 36.000 0.00 0.00 0.00 2.57
4901 7262 7.543359 TGGATTCCAATTTTTCATCTTCAGT 57.457 32.000 1.94 0.00 0.00 3.41
4945 7306 4.226427 AGAGAGCAATAAAGCATGACCA 57.774 40.909 0.00 0.00 36.85 4.02
4951 7312 6.239217 TGATTCCTAGAGAGCAATAAAGCA 57.761 37.500 0.00 0.00 36.85 3.91
4961 7322 8.414778 AGGTATTTTACGTTGATTCCTAGAGAG 58.585 37.037 0.00 0.00 0.00 3.20
5002 7363 5.567915 CGCGATAGTATTGTATTGTCATCGT 59.432 40.000 0.00 0.00 37.09 3.73
5004 7365 6.929587 ACGCGATAGTATTGTATTGTCATC 57.070 37.500 15.93 0.00 39.35 2.92
5007 7368 8.053411 TGTTTACGCGATAGTATTGTATTGTC 57.947 34.615 15.93 0.00 39.35 3.18
5008 7369 7.990541 TGTTTACGCGATAGTATTGTATTGT 57.009 32.000 15.93 0.00 39.35 2.71
5009 7370 8.696175 TGATGTTTACGCGATAGTATTGTATTG 58.304 33.333 15.93 0.00 39.35 1.90
5010 7371 8.806177 TGATGTTTACGCGATAGTATTGTATT 57.194 30.769 15.93 0.00 39.35 1.89
5011 7372 8.697067 GTTGATGTTTACGCGATAGTATTGTAT 58.303 33.333 15.93 0.00 39.35 2.29
5012 7373 7.701501 TGTTGATGTTTACGCGATAGTATTGTA 59.298 33.333 15.93 0.00 39.35 2.41
5018 7379 4.740268 TCTGTTGATGTTTACGCGATAGT 58.260 39.130 15.93 0.00 39.35 2.12
5019 7380 5.660391 CATCTGTTGATGTTTACGCGATAG 58.340 41.667 15.93 0.00 43.68 2.08
5034 7395 4.782156 TGCGTGTTTACATTCATCTGTTG 58.218 39.130 0.00 0.00 0.00 3.33
5080 7441 9.317827 ACCCTCTGTAAGTCATTTTACTTAGTA 57.682 33.333 0.00 0.00 41.42 1.82
5081 7442 8.203681 ACCCTCTGTAAGTCATTTTACTTAGT 57.796 34.615 0.00 0.00 41.42 2.24
5083 7444 9.933723 GTAACCCTCTGTAAGTCATTTTACTTA 57.066 33.333 0.00 0.00 40.20 2.24
5084 7445 7.601508 CGTAACCCTCTGTAAGTCATTTTACTT 59.398 37.037 0.00 0.00 42.31 2.24
5085 7446 7.039504 TCGTAACCCTCTGTAAGTCATTTTACT 60.040 37.037 0.00 0.00 35.16 2.24
5086 7447 7.092716 TCGTAACCCTCTGTAAGTCATTTTAC 58.907 38.462 0.00 0.00 34.78 2.01
5087 7448 7.230849 TCGTAACCCTCTGTAAGTCATTTTA 57.769 36.000 0.00 0.00 33.76 1.52
5088 7449 6.105397 TCGTAACCCTCTGTAAGTCATTTT 57.895 37.500 0.00 0.00 33.76 1.82
5089 7450 5.733620 TCGTAACCCTCTGTAAGTCATTT 57.266 39.130 0.00 0.00 33.76 2.32
5090 7451 5.245526 AGTTCGTAACCCTCTGTAAGTCATT 59.754 40.000 0.00 0.00 33.76 2.57
5091 7452 4.771054 AGTTCGTAACCCTCTGTAAGTCAT 59.229 41.667 0.00 0.00 33.76 3.06
5092 7453 4.147321 AGTTCGTAACCCTCTGTAAGTCA 58.853 43.478 0.00 0.00 33.76 3.41
5093 7454 4.780275 AGTTCGTAACCCTCTGTAAGTC 57.220 45.455 0.00 0.00 33.76 3.01
5094 7455 4.798593 GCAAGTTCGTAACCCTCTGTAAGT 60.799 45.833 0.00 0.00 33.76 2.24
5095 7456 3.678548 GCAAGTTCGTAACCCTCTGTAAG 59.321 47.826 0.00 0.00 0.00 2.34
5096 7457 3.322828 AGCAAGTTCGTAACCCTCTGTAA 59.677 43.478 0.00 0.00 0.00 2.41
5097 7458 2.895404 AGCAAGTTCGTAACCCTCTGTA 59.105 45.455 0.00 0.00 0.00 2.74
5098 7459 1.692519 AGCAAGTTCGTAACCCTCTGT 59.307 47.619 0.00 0.00 0.00 3.41
5099 7460 2.457366 AGCAAGTTCGTAACCCTCTG 57.543 50.000 0.00 0.00 0.00 3.35
5100 7461 2.094130 GCTAGCAAGTTCGTAACCCTCT 60.094 50.000 10.63 0.00 0.00 3.69
5101 7462 2.269172 GCTAGCAAGTTCGTAACCCTC 58.731 52.381 10.63 0.00 0.00 4.30
5102 7463 1.066358 GGCTAGCAAGTTCGTAACCCT 60.066 52.381 18.24 0.00 0.00 4.34
5103 7464 1.066358 AGGCTAGCAAGTTCGTAACCC 60.066 52.381 18.24 0.00 0.00 4.11
5104 7465 2.381725 AGGCTAGCAAGTTCGTAACC 57.618 50.000 18.24 0.00 0.00 2.85
5105 7466 2.671888 GGAAGGCTAGCAAGTTCGTAAC 59.328 50.000 18.24 0.33 0.00 2.50
5106 7467 2.300723 TGGAAGGCTAGCAAGTTCGTAA 59.699 45.455 18.24 3.27 0.00 3.18
5107 7468 1.897133 TGGAAGGCTAGCAAGTTCGTA 59.103 47.619 18.24 6.20 0.00 3.43
5108 7469 0.685097 TGGAAGGCTAGCAAGTTCGT 59.315 50.000 18.24 0.00 0.00 3.85
5109 7470 1.808411 TTGGAAGGCTAGCAAGTTCG 58.192 50.000 18.24 0.00 0.00 3.95
5110 7471 4.790765 AATTTGGAAGGCTAGCAAGTTC 57.209 40.909 18.24 15.00 0.00 3.01
5111 7472 4.158579 GCTAATTTGGAAGGCTAGCAAGTT 59.841 41.667 18.24 6.48 35.98 2.66
5112 7473 3.696548 GCTAATTTGGAAGGCTAGCAAGT 59.303 43.478 18.24 2.65 35.98 3.16
5113 7474 3.067320 GGCTAATTTGGAAGGCTAGCAAG 59.933 47.826 18.24 0.00 37.34 4.01
5114 7475 3.023832 GGCTAATTTGGAAGGCTAGCAA 58.976 45.455 18.24 0.64 37.34 3.91
5115 7476 2.654863 GGCTAATTTGGAAGGCTAGCA 58.345 47.619 18.24 0.00 37.34 3.49
5116 7477 1.604278 CGGCTAATTTGGAAGGCTAGC 59.396 52.381 6.04 6.04 36.21 3.42
5117 7478 2.919228 ACGGCTAATTTGGAAGGCTAG 58.081 47.619 0.00 0.00 36.21 3.42
5118 7479 3.275999 GAACGGCTAATTTGGAAGGCTA 58.724 45.455 0.00 0.00 36.21 3.93
5119 7480 2.092323 GAACGGCTAATTTGGAAGGCT 58.908 47.619 0.00 0.00 36.21 4.58
5120 7481 1.134367 GGAACGGCTAATTTGGAAGGC 59.866 52.381 0.00 0.00 35.08 4.35
5121 7482 2.723273 AGGAACGGCTAATTTGGAAGG 58.277 47.619 0.00 0.00 0.00 3.46
5122 7483 6.540914 TGTTATAGGAACGGCTAATTTGGAAG 59.459 38.462 0.00 0.00 0.00 3.46
5123 7484 6.416415 TGTTATAGGAACGGCTAATTTGGAA 58.584 36.000 0.00 0.00 0.00 3.53
5124 7485 5.991861 TGTTATAGGAACGGCTAATTTGGA 58.008 37.500 0.00 0.00 0.00 3.53
5125 7486 6.317893 ACTTGTTATAGGAACGGCTAATTTGG 59.682 38.462 0.00 0.00 0.00 3.28
5126 7487 7.316544 ACTTGTTATAGGAACGGCTAATTTG 57.683 36.000 0.00 0.00 0.00 2.32
5127 7488 8.886719 GTTACTTGTTATAGGAACGGCTAATTT 58.113 33.333 0.00 0.00 29.80 1.82
5128 7489 8.042515 TGTTACTTGTTATAGGAACGGCTAATT 58.957 33.333 0.00 0.00 41.08 1.40
5129 7490 7.558604 TGTTACTTGTTATAGGAACGGCTAAT 58.441 34.615 0.00 0.00 41.08 1.73
5130 7491 6.934056 TGTTACTTGTTATAGGAACGGCTAA 58.066 36.000 0.00 0.00 41.08 3.09
5131 7492 6.528537 TGTTACTTGTTATAGGAACGGCTA 57.471 37.500 0.00 0.00 41.08 3.93
5132 7493 5.410355 TGTTACTTGTTATAGGAACGGCT 57.590 39.130 0.00 0.00 41.08 5.52
5133 7494 7.517893 GCTTATGTTACTTGTTATAGGAACGGC 60.518 40.741 0.00 0.00 41.08 5.68
5134 7495 7.493320 TGCTTATGTTACTTGTTATAGGAACGG 59.507 37.037 0.00 0.00 41.08 4.44
5135 7496 8.415192 TGCTTATGTTACTTGTTATAGGAACG 57.585 34.615 0.00 0.00 41.08 3.95
5136 7497 9.595823 TCTGCTTATGTTACTTGTTATAGGAAC 57.404 33.333 0.00 0.00 39.08 3.62
5187 7548 9.014297 CCACTTTGGTATAGTTTCAGAATTTCT 57.986 33.333 0.00 0.00 31.35 2.52
5188 7549 7.755373 GCCACTTTGGTATAGTTTCAGAATTTC 59.245 37.037 0.00 0.00 40.46 2.17
5189 7550 7.232534 TGCCACTTTGGTATAGTTTCAGAATTT 59.767 33.333 0.00 0.00 40.46 1.82
5190 7551 6.719370 TGCCACTTTGGTATAGTTTCAGAATT 59.281 34.615 0.00 0.00 40.46 2.17
5191 7552 6.245408 TGCCACTTTGGTATAGTTTCAGAAT 58.755 36.000 0.00 0.00 40.46 2.40
5192 7553 5.626142 TGCCACTTTGGTATAGTTTCAGAA 58.374 37.500 0.00 0.00 40.46 3.02
5193 7554 5.235850 TGCCACTTTGGTATAGTTTCAGA 57.764 39.130 0.00 0.00 40.46 3.27
5194 7555 5.415701 ACATGCCACTTTGGTATAGTTTCAG 59.584 40.000 0.00 0.00 41.03 3.02
5195 7556 5.321102 ACATGCCACTTTGGTATAGTTTCA 58.679 37.500 0.00 0.00 41.03 2.69
5196 7557 5.897377 ACATGCCACTTTGGTATAGTTTC 57.103 39.130 0.00 0.00 41.03 2.78
5197 7558 7.954666 ATAACATGCCACTTTGGTATAGTTT 57.045 32.000 12.56 4.13 41.03 2.66
5198 7559 9.469097 TTTATAACATGCCACTTTGGTATAGTT 57.531 29.630 0.00 12.21 41.03 2.24
5199 7560 9.120538 CTTTATAACATGCCACTTTGGTATAGT 57.879 33.333 0.00 0.00 41.03 2.12
5200 7561 9.337396 TCTTTATAACATGCCACTTTGGTATAG 57.663 33.333 0.00 0.00 41.03 1.31
5201 7562 9.688091 TTCTTTATAACATGCCACTTTGGTATA 57.312 29.630 0.00 0.00 41.03 1.47
5202 7563 8.588290 TTCTTTATAACATGCCACTTTGGTAT 57.412 30.769 0.00 0.00 43.89 2.73
5203 7564 7.885922 TCTTCTTTATAACATGCCACTTTGGTA 59.114 33.333 0.00 0.00 40.46 3.25
5204 7565 6.719370 TCTTCTTTATAACATGCCACTTTGGT 59.281 34.615 0.00 0.00 40.46 3.67
5205 7566 7.156876 TCTTCTTTATAACATGCCACTTTGG 57.843 36.000 0.00 0.00 41.55 3.28
5206 7567 8.299570 ACTTCTTCTTTATAACATGCCACTTTG 58.700 33.333 0.00 0.00 0.00 2.77
5207 7568 8.409358 ACTTCTTCTTTATAACATGCCACTTT 57.591 30.769 0.00 0.00 0.00 2.66
5208 7569 8.409358 AACTTCTTCTTTATAACATGCCACTT 57.591 30.769 0.00 0.00 0.00 3.16
5209 7570 7.885399 AGAACTTCTTCTTTATAACATGCCACT 59.115 33.333 0.00 0.00 32.29 4.00
5210 7571 8.045176 AGAACTTCTTCTTTATAACATGCCAC 57.955 34.615 0.00 0.00 32.29 5.01
5211 7572 7.882791 TGAGAACTTCTTCTTTATAACATGCCA 59.117 33.333 0.00 0.00 36.82 4.92
5212 7573 8.268850 TGAGAACTTCTTCTTTATAACATGCC 57.731 34.615 0.00 0.00 36.82 4.40
5213 7574 9.766277 CTTGAGAACTTCTTCTTTATAACATGC 57.234 33.333 0.00 0.00 36.82 4.06
5216 7577 9.273016 CACCTTGAGAACTTCTTCTTTATAACA 57.727 33.333 0.00 0.00 36.82 2.41
5217 7578 9.274206 ACACCTTGAGAACTTCTTCTTTATAAC 57.726 33.333 0.00 0.00 36.82 1.89
5218 7579 9.273016 CACACCTTGAGAACTTCTTCTTTATAA 57.727 33.333 0.00 0.00 36.82 0.98
5219 7580 8.429641 ACACACCTTGAGAACTTCTTCTTTATA 58.570 33.333 0.00 0.00 36.82 0.98
5220 7581 7.227512 CACACACCTTGAGAACTTCTTCTTTAT 59.772 37.037 0.00 0.00 36.82 1.40
5221 7582 6.538742 CACACACCTTGAGAACTTCTTCTTTA 59.461 38.462 0.00 0.00 36.82 1.85
5222 7583 5.355350 CACACACCTTGAGAACTTCTTCTTT 59.645 40.000 0.00 0.00 36.82 2.52
5223 7584 4.878397 CACACACCTTGAGAACTTCTTCTT 59.122 41.667 0.00 0.00 36.82 2.52
5224 7585 4.162320 TCACACACCTTGAGAACTTCTTCT 59.838 41.667 0.00 0.00 39.64 2.85
5225 7586 4.442706 TCACACACCTTGAGAACTTCTTC 58.557 43.478 0.00 0.00 0.00 2.87
5226 7587 4.487714 TCACACACCTTGAGAACTTCTT 57.512 40.909 0.00 0.00 0.00 2.52
5227 7588 4.487714 TTCACACACCTTGAGAACTTCT 57.512 40.909 0.00 0.00 30.65 2.85
5228 7589 4.496507 GCTTTCACACACCTTGAGAACTTC 60.497 45.833 0.00 0.00 34.87 3.01
5229 7590 3.378427 GCTTTCACACACCTTGAGAACTT 59.622 43.478 0.00 0.00 34.87 2.66
5230 7591 2.945668 GCTTTCACACACCTTGAGAACT 59.054 45.455 0.00 0.00 34.87 3.01
5231 7592 2.682856 TGCTTTCACACACCTTGAGAAC 59.317 45.455 0.00 0.00 34.87 3.01
5232 7593 2.682856 GTGCTTTCACACACCTTGAGAA 59.317 45.455 0.00 0.00 42.66 2.87
5233 7594 2.092968 AGTGCTTTCACACACCTTGAGA 60.093 45.455 0.00 0.00 45.49 3.27
5234 7595 2.292267 AGTGCTTTCACACACCTTGAG 58.708 47.619 0.00 0.00 45.49 3.02
5235 7596 2.418368 AGTGCTTTCACACACCTTGA 57.582 45.000 0.00 0.00 45.49 3.02
5236 7597 2.480073 CCAAGTGCTTTCACACACCTTG 60.480 50.000 0.00 0.00 45.49 3.61
5237 7598 1.750778 CCAAGTGCTTTCACACACCTT 59.249 47.619 0.00 0.00 45.49 3.50
5238 7599 1.064758 TCCAAGTGCTTTCACACACCT 60.065 47.619 0.00 0.00 45.49 4.00
5239 7600 1.388547 TCCAAGTGCTTTCACACACC 58.611 50.000 0.00 0.00 45.49 4.16
5240 7601 3.715628 ATTCCAAGTGCTTTCACACAC 57.284 42.857 0.00 0.00 45.49 3.82
5241 7602 4.713553 TCTATTCCAAGTGCTTTCACACA 58.286 39.130 0.00 0.00 45.49 3.72
5242 7603 5.886960 ATCTATTCCAAGTGCTTTCACAC 57.113 39.130 0.00 0.00 45.49 3.82
5243 7604 6.374333 GGTTATCTATTCCAAGTGCTTTCACA 59.626 38.462 0.00 0.00 45.49 3.58
5244 7605 6.599638 AGGTTATCTATTCCAAGTGCTTTCAC 59.400 38.462 0.00 0.00 43.44 3.18
5245 7606 6.721318 AGGTTATCTATTCCAAGTGCTTTCA 58.279 36.000 0.00 0.00 0.00 2.69
5246 7607 7.631717 AAGGTTATCTATTCCAAGTGCTTTC 57.368 36.000 0.00 0.00 0.00 2.62
5247 7608 8.422577 AAAAGGTTATCTATTCCAAGTGCTTT 57.577 30.769 0.00 0.00 0.00 3.51
5248 7609 9.178758 CTAAAAGGTTATCTATTCCAAGTGCTT 57.821 33.333 0.00 0.00 0.00 3.91
5249 7610 8.548877 TCTAAAAGGTTATCTATTCCAAGTGCT 58.451 33.333 0.00 0.00 0.00 4.40
5250 7611 8.732746 TCTAAAAGGTTATCTATTCCAAGTGC 57.267 34.615 0.00 0.00 0.00 4.40
5252 7613 9.853177 CCATCTAAAAGGTTATCTATTCCAAGT 57.147 33.333 0.00 0.00 0.00 3.16
5253 7614 9.853177 ACCATCTAAAAGGTTATCTATTCCAAG 57.147 33.333 0.00 0.00 33.39 3.61
5254 7615 9.627123 CACCATCTAAAAGGTTATCTATTCCAA 57.373 33.333 0.00 0.00 35.52 3.53
5255 7616 8.998814 TCACCATCTAAAAGGTTATCTATTCCA 58.001 33.333 0.00 0.00 35.52 3.53
5256 7617 9.274206 GTCACCATCTAAAAGGTTATCTATTCC 57.726 37.037 0.00 0.00 35.52 3.01
5258 7619 9.838339 CAGTCACCATCTAAAAGGTTATCTATT 57.162 33.333 0.00 0.00 35.52 1.73
5259 7620 8.432805 CCAGTCACCATCTAAAAGGTTATCTAT 58.567 37.037 0.00 0.00 35.52 1.98
5260 7621 7.635089 GCCAGTCACCATCTAAAAGGTTATCTA 60.635 40.741 0.00 0.00 35.52 1.98
5261 7622 6.653989 CCAGTCACCATCTAAAAGGTTATCT 58.346 40.000 0.00 0.00 35.52 1.98
5262 7623 5.297029 GCCAGTCACCATCTAAAAGGTTATC 59.703 44.000 0.00 0.00 35.52 1.75
5263 7624 5.044846 AGCCAGTCACCATCTAAAAGGTTAT 60.045 40.000 0.00 0.00 35.52 1.89
5264 7625 4.288626 AGCCAGTCACCATCTAAAAGGTTA 59.711 41.667 0.00 0.00 35.52 2.85
5265 7626 3.074538 AGCCAGTCACCATCTAAAAGGTT 59.925 43.478 0.00 0.00 35.52 3.50
5266 7627 2.644798 AGCCAGTCACCATCTAAAAGGT 59.355 45.455 0.00 0.00 39.10 3.50
5267 7628 3.356529 AGCCAGTCACCATCTAAAAGG 57.643 47.619 0.00 0.00 0.00 3.11
5268 7629 3.441572 CCAAGCCAGTCACCATCTAAAAG 59.558 47.826 0.00 0.00 0.00 2.27
5269 7630 3.420893 CCAAGCCAGTCACCATCTAAAA 58.579 45.455 0.00 0.00 0.00 1.52
5270 7631 2.879756 GCCAAGCCAGTCACCATCTAAA 60.880 50.000 0.00 0.00 0.00 1.85
5271 7632 1.340017 GCCAAGCCAGTCACCATCTAA 60.340 52.381 0.00 0.00 0.00 2.10
5272 7633 0.253044 GCCAAGCCAGTCACCATCTA 59.747 55.000 0.00 0.00 0.00 1.98
5273 7634 1.001641 GCCAAGCCAGTCACCATCT 60.002 57.895 0.00 0.00 0.00 2.90
5274 7635 0.610232 AAGCCAAGCCAGTCACCATC 60.610 55.000 0.00 0.00 0.00 3.51
5275 7636 0.896940 CAAGCCAAGCCAGTCACCAT 60.897 55.000 0.00 0.00 0.00 3.55
5276 7637 1.529010 CAAGCCAAGCCAGTCACCA 60.529 57.895 0.00 0.00 0.00 4.17
5277 7638 1.518903 GACAAGCCAAGCCAGTCACC 61.519 60.000 4.67 0.00 34.50 4.02
5278 7639 0.819259 TGACAAGCCAAGCCAGTCAC 60.819 55.000 7.39 0.00 37.71 3.67
5279 7640 0.106769 TTGACAAGCCAAGCCAGTCA 60.107 50.000 7.39 7.39 39.69 3.41
5280 7641 0.312102 GTTGACAAGCCAAGCCAGTC 59.688 55.000 0.00 2.98 34.78 3.51
5281 7642 0.395586 TGTTGACAAGCCAAGCCAGT 60.396 50.000 0.00 0.00 0.00 4.00
5282 7643 0.963962 ATGTTGACAAGCCAAGCCAG 59.036 50.000 0.00 0.00 0.00 4.85
5283 7644 1.068895 CAATGTTGACAAGCCAAGCCA 59.931 47.619 0.00 0.00 0.00 4.75
5284 7645 1.340889 TCAATGTTGACAAGCCAAGCC 59.659 47.619 0.00 0.00 31.01 4.35
5285 7646 2.798976 TCAATGTTGACAAGCCAAGC 57.201 45.000 0.00 0.00 31.01 4.01
5286 7647 3.581755 CCATCAATGTTGACAAGCCAAG 58.418 45.455 0.00 0.00 40.49 3.61
5287 7648 2.299582 CCCATCAATGTTGACAAGCCAA 59.700 45.455 0.00 0.00 40.49 4.52
5288 7649 1.894466 CCCATCAATGTTGACAAGCCA 59.106 47.619 0.00 0.00 40.49 4.75
5289 7650 1.895131 ACCCATCAATGTTGACAAGCC 59.105 47.619 0.00 0.00 40.49 4.35
5290 7651 2.927871 GCACCCATCAATGTTGACAAGC 60.928 50.000 0.00 0.00 40.49 4.01
5291 7652 2.296752 TGCACCCATCAATGTTGACAAG 59.703 45.455 0.00 0.00 40.49 3.16
5292 7653 2.314246 TGCACCCATCAATGTTGACAA 58.686 42.857 0.00 0.00 40.49 3.18
5293 7654 1.992538 TGCACCCATCAATGTTGACA 58.007 45.000 0.00 0.00 40.49 3.58
5294 7655 3.155093 GATGCACCCATCAATGTTGAC 57.845 47.619 0.00 0.00 45.75 3.18
5303 7664 3.245016 TGGATCTTATGGATGCACCCATC 60.245 47.826 18.50 1.63 45.56 3.51
5304 7665 2.718062 TGGATCTTATGGATGCACCCAT 59.282 45.455 19.01 19.01 45.56 4.00
5305 7666 2.134354 TGGATCTTATGGATGCACCCA 58.866 47.619 0.00 0.00 45.56 4.51
5306 7667 2.957402 TGGATCTTATGGATGCACCC 57.043 50.000 0.00 0.00 45.56 4.61
5310 7671 6.257411 CGAGATACAATGGATCTTATGGATGC 59.743 42.308 9.68 0.00 42.15 3.91
5311 7672 7.326454 ACGAGATACAATGGATCTTATGGATG 58.674 38.462 9.68 0.00 33.71 3.51
5312 7673 7.398618 AGACGAGATACAATGGATCTTATGGAT 59.601 37.037 9.68 0.00 33.71 3.41
5313 7674 6.721668 AGACGAGATACAATGGATCTTATGGA 59.278 38.462 9.68 0.00 33.71 3.41
5314 7675 6.929625 AGACGAGATACAATGGATCTTATGG 58.070 40.000 9.68 2.81 33.71 2.74
5315 7676 7.148672 GCAAGACGAGATACAATGGATCTTATG 60.149 40.741 9.68 5.70 33.71 1.90
5316 7677 6.870965 GCAAGACGAGATACAATGGATCTTAT 59.129 38.462 9.68 0.72 33.71 1.73
5317 7678 6.183360 TGCAAGACGAGATACAATGGATCTTA 60.183 38.462 9.68 0.00 33.71 2.10
5318 7679 5.053145 GCAAGACGAGATACAATGGATCTT 58.947 41.667 9.68 0.00 33.71 2.40
5319 7680 4.100035 TGCAAGACGAGATACAATGGATCT 59.900 41.667 7.87 7.87 36.33 2.75
5320 7681 4.371786 TGCAAGACGAGATACAATGGATC 58.628 43.478 0.00 0.00 0.00 3.36
5321 7682 4.406648 TGCAAGACGAGATACAATGGAT 57.593 40.909 0.00 0.00 0.00 3.41
5322 7683 3.885724 TGCAAGACGAGATACAATGGA 57.114 42.857 0.00 0.00 0.00 3.41
5323 7684 3.303593 GCATGCAAGACGAGATACAATGG 60.304 47.826 14.21 0.00 0.00 3.16
5324 7685 3.558829 AGCATGCAAGACGAGATACAATG 59.441 43.478 21.98 0.00 0.00 2.82
5325 7686 3.801698 AGCATGCAAGACGAGATACAAT 58.198 40.909 21.98 0.00 0.00 2.71
5326 7687 3.118992 AGAGCATGCAAGACGAGATACAA 60.119 43.478 21.98 0.00 0.00 2.41
5327 7688 2.428530 AGAGCATGCAAGACGAGATACA 59.571 45.455 21.98 0.00 0.00 2.29
5328 7689 2.793790 CAGAGCATGCAAGACGAGATAC 59.206 50.000 21.98 0.00 0.00 2.24
5329 7690 3.089573 CAGAGCATGCAAGACGAGATA 57.910 47.619 21.98 0.00 0.00 1.98
5330 7691 1.937278 CAGAGCATGCAAGACGAGAT 58.063 50.000 21.98 0.00 0.00 2.75
5331 7692 3.430779 CAGAGCATGCAAGACGAGA 57.569 52.632 21.98 0.00 0.00 4.04
5341 7702 3.612860 GCTTTTCAAATCTGCAGAGCATG 59.387 43.478 22.96 18.95 38.13 4.06
5342 7703 3.257375 TGCTTTTCAAATCTGCAGAGCAT 59.743 39.130 22.96 8.09 38.13 3.79
5343 7704 2.624364 TGCTTTTCAAATCTGCAGAGCA 59.376 40.909 22.96 19.22 36.63 4.26
5344 7705 3.293311 TGCTTTTCAAATCTGCAGAGC 57.707 42.857 22.96 16.85 0.00 4.09
5348 7709 1.687660 TGCCTGCTTTTCAAATCTGCA 59.312 42.857 0.00 0.00 0.00 4.41
5349 7710 2.334838 CTGCCTGCTTTTCAAATCTGC 58.665 47.619 0.00 0.00 0.00 4.26
5350 7711 2.929592 GCCTGCCTGCTTTTCAAATCTG 60.930 50.000 0.00 0.00 0.00 2.90
5351 7712 1.274447 GCCTGCCTGCTTTTCAAATCT 59.726 47.619 0.00 0.00 0.00 2.40
5352 7713 1.001181 TGCCTGCCTGCTTTTCAAATC 59.999 47.619 0.00 0.00 0.00 2.17
5353 7714 1.050204 TGCCTGCCTGCTTTTCAAAT 58.950 45.000 0.00 0.00 0.00 2.32
5354 7715 1.050204 ATGCCTGCCTGCTTTTCAAA 58.950 45.000 0.00 0.00 0.00 2.69
5355 7716 1.050204 AATGCCTGCCTGCTTTTCAA 58.950 45.000 0.00 0.00 0.00 2.69
5356 7717 1.001181 GAAATGCCTGCCTGCTTTTCA 59.999 47.619 21.09 0.00 46.46 2.69
5357 7718 1.718396 GAAATGCCTGCCTGCTTTTC 58.282 50.000 15.37 15.37 43.53 2.29
5358 7719 0.037975 CGAAATGCCTGCCTGCTTTT 60.038 50.000 7.77 7.77 40.16 2.27
5359 7720 1.181098 ACGAAATGCCTGCCTGCTTT 61.181 50.000 0.00 0.00 0.00 3.51
5360 7721 1.604593 ACGAAATGCCTGCCTGCTT 60.605 52.632 0.00 0.00 0.00 3.91
5361 7722 2.034687 ACGAAATGCCTGCCTGCT 59.965 55.556 0.00 0.00 0.00 4.24
5362 7723 2.180017 CACGAAATGCCTGCCTGC 59.820 61.111 0.00 0.00 0.00 4.85
5363 7724 1.243342 TTCCACGAAATGCCTGCCTG 61.243 55.000 0.00 0.00 0.00 4.85
5364 7725 1.074775 TTCCACGAAATGCCTGCCT 59.925 52.632 0.00 0.00 0.00 4.75
5365 7726 1.212751 GTTCCACGAAATGCCTGCC 59.787 57.895 0.00 0.00 0.00 4.85
5366 7727 0.109597 CTGTTCCACGAAATGCCTGC 60.110 55.000 0.00 0.00 0.00 4.85
5367 7728 0.109597 GCTGTTCCACGAAATGCCTG 60.110 55.000 0.00 0.00 0.00 4.85
5368 7729 0.250901 AGCTGTTCCACGAAATGCCT 60.251 50.000 0.00 0.00 0.00 4.75
5369 7730 1.398390 CTAGCTGTTCCACGAAATGCC 59.602 52.381 0.00 0.00 0.00 4.40
5370 7731 2.076863 ACTAGCTGTTCCACGAAATGC 58.923 47.619 0.00 0.00 0.00 3.56
5371 7732 3.067106 ACACTAGCTGTTCCACGAAATG 58.933 45.455 0.00 0.00 0.00 2.32
5372 7733 3.067106 CACACTAGCTGTTCCACGAAAT 58.933 45.455 0.00 0.00 0.00 2.17
5373 7734 2.479837 CACACTAGCTGTTCCACGAAA 58.520 47.619 0.00 0.00 0.00 3.46
5374 7735 1.872237 GCACACTAGCTGTTCCACGAA 60.872 52.381 0.00 0.00 0.00 3.85
5375 7736 0.319555 GCACACTAGCTGTTCCACGA 60.320 55.000 0.00 0.00 0.00 4.35
5376 7737 0.599991 TGCACACTAGCTGTTCCACG 60.600 55.000 0.00 0.00 34.99 4.94
5377 7738 1.151668 CTGCACACTAGCTGTTCCAC 58.848 55.000 0.00 0.00 34.99 4.02
5378 7739 0.035317 CCTGCACACTAGCTGTTCCA 59.965 55.000 0.00 0.00 34.99 3.53
5379 7740 0.321671 TCCTGCACACTAGCTGTTCC 59.678 55.000 0.00 0.00 34.99 3.62
5380 7741 1.801178 GTTCCTGCACACTAGCTGTTC 59.199 52.381 0.00 0.00 34.99 3.18
5381 7742 1.140852 TGTTCCTGCACACTAGCTGTT 59.859 47.619 0.00 0.00 34.99 3.16
5382 7743 0.758734 TGTTCCTGCACACTAGCTGT 59.241 50.000 0.00 0.00 34.99 4.40
5383 7744 2.105006 ATGTTCCTGCACACTAGCTG 57.895 50.000 0.00 0.00 34.99 4.24
5384 7745 2.419297 GCTATGTTCCTGCACACTAGCT 60.419 50.000 0.00 0.00 34.41 3.32
5385 7746 1.936547 GCTATGTTCCTGCACACTAGC 59.063 52.381 0.00 0.00 32.07 3.42
5386 7747 3.452474 GAGCTATGTTCCTGCACACTAG 58.548 50.000 0.00 0.00 0.00 2.57
5387 7748 2.159240 CGAGCTATGTTCCTGCACACTA 60.159 50.000 0.00 0.00 0.00 2.74
5388 7749 1.404717 CGAGCTATGTTCCTGCACACT 60.405 52.381 0.00 0.00 0.00 3.55
5389 7750 1.002366 CGAGCTATGTTCCTGCACAC 58.998 55.000 0.00 0.00 0.00 3.82
5390 7751 0.740868 GCGAGCTATGTTCCTGCACA 60.741 55.000 0.00 0.00 0.00 4.57
5391 7752 1.756375 CGCGAGCTATGTTCCTGCAC 61.756 60.000 0.00 0.00 0.00 4.57
5392 7753 1.519234 CGCGAGCTATGTTCCTGCA 60.519 57.895 0.00 0.00 0.00 4.41
5393 7754 1.519455 ACGCGAGCTATGTTCCTGC 60.519 57.895 15.93 0.00 0.00 4.85
5394 7755 4.814900 ACGCGAGCTATGTTCCTG 57.185 55.556 15.93 0.00 0.00 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.