Multiple sequence alignment - TraesCS1D01G452400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G452400 chr1D 100.000 4900 0 0 1 4900 493939266 493934367 0.000000e+00 9049.0
1 TraesCS1D01G452400 chr1D 90.385 416 37 1 4230 4645 491082485 491082073 1.200000e-150 544.0
2 TraesCS1D01G452400 chr1B 83.511 3663 294 128 777 4223 687074939 687071371 0.000000e+00 3133.0
3 TraesCS1D01G452400 chr1B 89.126 469 39 4 289 750 687075468 687075005 1.530000e-159 573.0
4 TraesCS1D01G452400 chr1B 89.486 428 39 3 4216 4643 382688041 382687620 2.010000e-148 536.0
5 TraesCS1D01G452400 chr1B 91.250 160 14 0 134 293 687075845 687075686 8.260000e-53 219.0
6 TraesCS1D01G452400 chr1B 83.505 194 9 5 1709 1886 186141070 186141256 5.080000e-35 159.0
7 TraesCS1D01G452400 chr1B 85.263 95 10 1 1852 1942 602228078 602228172 1.450000e-15 95.3
8 TraesCS1D01G452400 chr2A 84.385 1300 137 37 1852 3098 187940973 187942259 0.000000e+00 1216.0
9 TraesCS1D01G452400 chr2A 78.035 519 51 27 1397 1886 479206908 479207392 8.080000e-68 268.0
10 TraesCS1D01G452400 chr2A 86.538 208 28 0 2891 3098 547265803 547265596 3.810000e-56 230.0
11 TraesCS1D01G452400 chr2A 86.538 208 28 0 2891 3098 642933959 642933752 3.810000e-56 230.0
12 TraesCS1D01G452400 chr2A 76.342 503 56 27 1397 1870 780541906 780541438 1.380000e-50 211.0
13 TraesCS1D01G452400 chr2A 89.157 166 17 1 3012 3177 642933793 642933629 6.430000e-49 206.0
14 TraesCS1D01G452400 chr1A 84.182 1296 147 33 1852 3098 535432461 535431175 0.000000e+00 1205.0
15 TraesCS1D01G452400 chr1A 85.319 1049 105 23 1882 2892 551511830 551512867 0.000000e+00 1038.0
16 TraesCS1D01G452400 chr1A 93.570 591 30 5 2516 3098 592318248 592317658 0.000000e+00 874.0
17 TraesCS1D01G452400 chr1A 86.179 615 43 17 3012 3599 592317609 592317010 1.160000e-175 627.0
18 TraesCS1D01G452400 chr1A 87.349 166 20 1 3012 3177 551512997 551513161 6.470000e-44 189.0
19 TraesCS1D01G452400 chr1A 83.846 130 5 4 2039 2152 592318387 592318258 5.190000e-20 110.0
20 TraesCS1D01G452400 chr1A 92.727 55 4 0 3012 3066 535431216 535431162 4.070000e-11 80.5
21 TraesCS1D01G452400 chr5A 84.040 1297 147 29 1852 3098 680338554 680339840 0.000000e+00 1194.0
22 TraesCS1D01G452400 chr5A 92.727 55 4 0 3012 3066 680339799 680339853 4.070000e-11 80.5
23 TraesCS1D01G452400 chr6D 90.443 429 38 1 4216 4644 345589436 345589861 3.310000e-156 562.0
24 TraesCS1D01G452400 chr5D 90.210 429 39 1 4216 4644 391232284 391232709 1.540000e-154 556.0
25 TraesCS1D01G452400 chr5D 89.213 445 38 3 4232 4676 387239828 387240262 9.270000e-152 547.0
26 TraesCS1D01G452400 chr5D 77.899 733 76 30 1204 1886 235590829 235591525 1.290000e-100 377.0
27 TraesCS1D01G452400 chr5D 77.217 733 77 36 1204 1886 545793126 545793818 3.630000e-91 346.0
28 TraesCS1D01G452400 chr5D 92.857 224 16 0 4675 4898 391233703 391233926 4.730000e-85 326.0
29 TraesCS1D01G452400 chr4D 89.262 447 38 3 4230 4676 473973172 473972736 7.170000e-153 551.0
30 TraesCS1D01G452400 chr4D 100.000 31 0 0 142 172 432578859 432578889 1.910000e-04 58.4
31 TraesCS1D01G452400 chr3B 89.977 429 36 2 4216 4644 479890112 479889691 9.270000e-152 547.0
32 TraesCS1D01G452400 chr3B 77.927 521 48 21 1397 1886 725023436 725023920 3.760000e-66 263.0
33 TraesCS1D01G452400 chr3B 100.000 29 0 0 144 172 101838591 101838619 2.000000e-03 54.7
34 TraesCS1D01G452400 chr4B 89.038 447 39 3 4230 4676 622505232 622504796 3.340000e-151 545.0
35 TraesCS1D01G452400 chr4B 78.541 466 44 13 1448 1886 170726405 170726841 6.290000e-64 255.0
36 TraesCS1D01G452400 chr6B 88.591 447 47 2 4230 4676 717719678 717720120 1.550000e-149 540.0
37 TraesCS1D01G452400 chr6B 91.630 227 17 2 4675 4900 223247190 223247415 3.680000e-81 313.0
38 TraesCS1D01G452400 chr6B 90.265 226 21 1 4675 4900 447109108 447108884 1.330000e-75 294.0
39 TraesCS1D01G452400 chr6B 90.179 224 22 0 4675 4898 717721091 717721314 4.800000e-75 292.0
40 TraesCS1D01G452400 chr2D 77.686 726 91 40 1204 1886 548510360 548511057 1.290000e-100 377.0
41 TraesCS1D01G452400 chr2D 77.410 726 93 42 1204 1886 548511768 548512465 2.790000e-97 366.0
42 TraesCS1D01G452400 chr2D 76.828 725 94 34 1204 1886 532379398 532378706 1.690000e-89 340.0
43 TraesCS1D01G452400 chr2D 77.007 735 75 28 1204 1886 592918722 592919414 7.860000e-88 335.0
44 TraesCS1D01G452400 chr6A 91.781 219 18 0 4680 4898 408018645 408018427 6.160000e-79 305.0
45 TraesCS1D01G452400 chr7D 91.071 224 20 0 4675 4898 449984078 449983855 2.220000e-78 303.0
46 TraesCS1D01G452400 chr5B 91.071 224 20 0 4675 4898 659535595 659535818 2.220000e-78 303.0
47 TraesCS1D01G452400 chr5B 78.279 488 50 24 1426 1886 607193683 607193225 3.760000e-66 263.0
48 TraesCS1D01G452400 chr7B 90.625 224 21 0 4675 4898 36428611 36428388 1.030000e-76 298.0
49 TraesCS1D01G452400 chr2B 90.179 224 22 0 4675 4898 225326306 225326083 4.800000e-75 292.0
50 TraesCS1D01G452400 chr2B 77.649 519 53 28 1397 1886 774679700 774680184 1.750000e-64 257.0
51 TraesCS1D01G452400 chr2B 78.029 487 47 15 1427 1886 414756852 414756399 8.140000e-63 252.0
52 TraesCS1D01G452400 chr2B 81.443 194 13 11 1709 1886 263970594 263970780 2.380000e-28 137.0
53 TraesCS1D01G452400 chr3A 76.923 520 55 30 1397 1886 126069209 126068725 8.200000e-58 235.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G452400 chr1D 493934367 493939266 4899 True 9049.000000 9049 100.000000 1 4900 1 chr1D.!!$R2 4899
1 TraesCS1D01G452400 chr1B 687071371 687075845 4474 True 1308.333333 3133 87.962333 134 4223 3 chr1B.!!$R2 4089
2 TraesCS1D01G452400 chr2A 187940973 187942259 1286 False 1216.000000 1216 84.385000 1852 3098 1 chr2A.!!$F1 1246
3 TraesCS1D01G452400 chr1A 535431162 535432461 1299 True 642.750000 1205 88.454500 1852 3098 2 chr1A.!!$R1 1246
4 TraesCS1D01G452400 chr1A 551511830 551513161 1331 False 613.500000 1038 86.334000 1882 3177 2 chr1A.!!$F1 1295
5 TraesCS1D01G452400 chr1A 592317010 592318387 1377 True 537.000000 874 87.865000 2039 3599 3 chr1A.!!$R2 1560
6 TraesCS1D01G452400 chr5A 680338554 680339853 1299 False 637.250000 1194 88.383500 1852 3098 2 chr5A.!!$F1 1246
7 TraesCS1D01G452400 chr5D 391232284 391233926 1642 False 441.000000 556 91.533500 4216 4898 2 chr5D.!!$F4 682
8 TraesCS1D01G452400 chr5D 235590829 235591525 696 False 377.000000 377 77.899000 1204 1886 1 chr5D.!!$F1 682
9 TraesCS1D01G452400 chr5D 545793126 545793818 692 False 346.000000 346 77.217000 1204 1886 1 chr5D.!!$F3 682
10 TraesCS1D01G452400 chr6B 717719678 717721314 1636 False 416.000000 540 89.385000 4230 4898 2 chr6B.!!$F2 668
11 TraesCS1D01G452400 chr2D 548510360 548512465 2105 False 371.500000 377 77.548000 1204 1886 2 chr2D.!!$F2 682
12 TraesCS1D01G452400 chr2D 532378706 532379398 692 True 340.000000 340 76.828000 1204 1886 1 chr2D.!!$R1 682
13 TraesCS1D01G452400 chr2D 592918722 592919414 692 False 335.000000 335 77.007000 1204 1886 1 chr2D.!!$F1 682

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
590 817 0.104120 TCATAGATTCCACGGGCGTG 59.896 55.0 0.00 0.00 45.02 5.34 F
1110 1398 0.034059 AATCCATCTGTCGGCCGATC 59.966 55.0 33.58 24.05 0.00 3.69 F
1115 1403 0.039074 ATCTGTCGGCCGATCGATTC 60.039 55.0 33.58 17.93 41.40 2.52 F
1691 2046 0.102120 CCACGCTTCCTTTTTGCACA 59.898 50.0 0.00 0.00 0.00 4.57 F
1865 2271 0.179045 AGCAAACCACTTCGCTGTCT 60.179 50.0 0.00 0.00 32.33 3.41 F
3086 3962 0.381428 GCGTCGTGTTCTTTGTCGTG 60.381 55.0 0.00 0.00 0.00 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2155 2802 0.530650 ACGCGGACTGCTCATATTGG 60.531 55.0 12.47 0.0 43.27 3.16 R
3068 3944 0.381428 GCACGACAAAGAACACGACG 60.381 55.0 0.00 0.0 0.00 5.12 R
3109 4120 1.293924 CATCGCAGAGTTCACCATCC 58.706 55.0 0.00 0.0 43.63 3.51 R
3641 4704 0.034059 ACAGCTGCTTACACGCTTCT 59.966 50.0 15.27 0.0 30.84 2.85 R
3663 4726 0.099082 TGCGAAAACAAACCCGTCAC 59.901 50.0 0.00 0.0 0.00 3.67 R
4748 6965 0.033796 CATGCCCCATGAACCACTCT 60.034 55.0 0.00 0.0 43.81 3.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
93 94 7.636150 AAAAAGAGTAGATGGGATGACAATG 57.364 36.000 0.00 0.00 0.00 2.82
94 95 4.970860 AGAGTAGATGGGATGACAATGG 57.029 45.455 0.00 0.00 0.00 3.16
95 96 4.560739 AGAGTAGATGGGATGACAATGGA 58.439 43.478 0.00 0.00 0.00 3.41
96 97 4.592351 AGAGTAGATGGGATGACAATGGAG 59.408 45.833 0.00 0.00 0.00 3.86
97 98 4.560739 AGTAGATGGGATGACAATGGAGA 58.439 43.478 0.00 0.00 0.00 3.71
98 99 3.853355 AGATGGGATGACAATGGAGAC 57.147 47.619 0.00 0.00 0.00 3.36
99 100 2.103771 AGATGGGATGACAATGGAGACG 59.896 50.000 0.00 0.00 0.00 4.18
100 101 1.567357 TGGGATGACAATGGAGACGA 58.433 50.000 0.00 0.00 0.00 4.20
101 102 2.118679 TGGGATGACAATGGAGACGAT 58.881 47.619 0.00 0.00 0.00 3.73
102 103 2.158914 TGGGATGACAATGGAGACGATG 60.159 50.000 0.00 0.00 0.00 3.84
103 104 2.158900 GGGATGACAATGGAGACGATGT 60.159 50.000 0.00 0.00 34.84 3.06
104 105 3.069586 GGGATGACAATGGAGACGATGTA 59.930 47.826 0.00 0.00 32.63 2.29
105 106 4.262635 GGGATGACAATGGAGACGATGTAT 60.263 45.833 0.00 0.00 32.63 2.29
106 107 4.687948 GGATGACAATGGAGACGATGTATG 59.312 45.833 0.00 0.00 32.63 2.39
107 108 4.058721 TGACAATGGAGACGATGTATGG 57.941 45.455 0.00 0.00 32.63 2.74
108 109 2.802816 GACAATGGAGACGATGTATGGC 59.197 50.000 0.00 0.00 32.63 4.40
109 110 2.435805 ACAATGGAGACGATGTATGGCT 59.564 45.455 0.00 0.00 30.94 4.75
110 111 3.641436 ACAATGGAGACGATGTATGGCTA 59.359 43.478 0.00 0.00 30.94 3.93
111 112 3.944055 ATGGAGACGATGTATGGCTAC 57.056 47.619 0.00 0.00 0.00 3.58
112 113 1.961394 TGGAGACGATGTATGGCTACC 59.039 52.381 0.00 0.00 0.00 3.18
113 114 2.240279 GGAGACGATGTATGGCTACCT 58.760 52.381 0.00 0.00 0.00 3.08
114 115 2.229302 GGAGACGATGTATGGCTACCTC 59.771 54.545 0.00 0.00 0.00 3.85
115 116 1.880675 AGACGATGTATGGCTACCTCG 59.119 52.381 14.83 14.83 45.68 4.63
117 118 2.051879 CGATGTATGGCTACCTCGTG 57.948 55.000 10.93 0.00 39.60 4.35
118 119 1.784525 GATGTATGGCTACCTCGTGC 58.215 55.000 0.00 0.00 0.00 5.34
119 120 1.068588 GATGTATGGCTACCTCGTGCA 59.931 52.381 0.00 0.00 0.00 4.57
120 121 0.899019 TGTATGGCTACCTCGTGCAA 59.101 50.000 0.00 0.00 0.00 4.08
121 122 1.484653 TGTATGGCTACCTCGTGCAAT 59.515 47.619 0.00 0.00 0.00 3.56
122 123 1.867233 GTATGGCTACCTCGTGCAATG 59.133 52.381 0.00 0.00 0.00 2.82
123 124 0.464373 ATGGCTACCTCGTGCAATGG 60.464 55.000 0.00 0.00 0.00 3.16
124 125 1.220749 GGCTACCTCGTGCAATGGA 59.779 57.895 7.74 0.00 0.00 3.41
125 126 0.179045 GGCTACCTCGTGCAATGGAT 60.179 55.000 7.74 0.00 0.00 3.41
126 127 0.940126 GCTACCTCGTGCAATGGATG 59.060 55.000 7.74 0.00 0.00 3.51
127 128 1.473257 GCTACCTCGTGCAATGGATGA 60.473 52.381 7.74 0.00 0.00 2.92
128 129 2.205074 CTACCTCGTGCAATGGATGAC 58.795 52.381 7.74 0.00 0.00 3.06
129 130 0.324614 ACCTCGTGCAATGGATGACA 59.675 50.000 7.74 0.00 0.00 3.58
130 131 1.271325 ACCTCGTGCAATGGATGACAA 60.271 47.619 7.74 0.00 0.00 3.18
131 132 2.019249 CCTCGTGCAATGGATGACAAT 58.981 47.619 0.00 0.00 0.00 2.71
132 133 3.205338 CCTCGTGCAATGGATGACAATA 58.795 45.455 0.00 0.00 0.00 1.90
142 143 8.623903 TGCAATGGATGACAATAGTTTCTAATC 58.376 33.333 0.00 0.00 0.00 1.75
179 180 4.938080 AGTACCTCATGCAAGAGATTACG 58.062 43.478 20.17 5.64 37.87 3.18
183 184 4.100035 ACCTCATGCAAGAGATTACGATGA 59.900 41.667 20.17 0.00 37.87 2.92
203 204 0.959553 AGACGATGTATGGCTACCGG 59.040 55.000 0.00 0.00 0.00 5.28
217 218 0.174845 TACCGGGAGCATGTTTCGAG 59.825 55.000 6.32 2.26 0.00 4.04
218 219 1.815421 CCGGGAGCATGTTTCGAGG 60.815 63.158 0.00 0.00 0.00 4.63
255 256 4.319037 GCTAACTCCTATCCTAGCCCTA 57.681 50.000 0.00 0.00 32.35 3.53
268 269 5.999044 TCCTAGCCCTACCTTATATAGACG 58.001 45.833 0.00 0.00 0.00 4.18
277 278 4.417437 ACCTTATATAGACGACATGGGCT 58.583 43.478 0.00 0.00 0.00 5.19
321 544 1.483415 TCTAACCCTCGTTGGCCATAC 59.517 52.381 6.09 7.16 33.17 2.39
322 545 0.542805 TAACCCTCGTTGGCCATACC 59.457 55.000 6.09 0.00 39.84 2.73
330 553 1.102978 GTTGGCCATACCGCAAGAAT 58.897 50.000 6.09 0.00 43.94 2.40
334 557 2.884012 TGGCCATACCGCAAGAATTATG 59.116 45.455 0.00 0.00 43.94 1.90
335 558 2.351738 GGCCATACCGCAAGAATTATGC 60.352 50.000 0.00 5.78 43.02 3.14
344 567 4.472691 GCAAGAATTATGCGCACTATCA 57.527 40.909 14.90 0.00 33.57 2.15
346 569 4.849926 GCAAGAATTATGCGCACTATCATG 59.150 41.667 14.90 13.18 33.57 3.07
351 574 1.597742 ATGCGCACTATCATGTTCCC 58.402 50.000 14.90 0.00 0.00 3.97
384 611 4.262635 CCCCTTAGACACATATTGATCGCT 60.263 45.833 0.00 0.00 0.00 4.93
387 614 5.509670 CCTTAGACACATATTGATCGCTCCA 60.510 44.000 0.00 0.00 0.00 3.86
389 616 4.375272 AGACACATATTGATCGCTCCAAG 58.625 43.478 0.00 0.00 0.00 3.61
426 653 4.300189 GATTCCGATCCTATCTCGATGG 57.700 50.000 0.00 0.00 38.38 3.51
430 657 3.085533 CCGATCCTATCTCGATGGAGTT 58.914 50.000 4.53 0.00 41.26 3.01
449 676 0.685097 TTTGTTCTCGCTAGGGCAGT 59.315 50.000 1.02 0.00 38.60 4.40
525 752 8.848948 TTTTGTAATACACACACAATGTTGAG 57.151 30.769 0.00 0.00 40.64 3.02
531 758 3.817084 ACACACACAATGTTGAGATGGAG 59.183 43.478 0.00 0.00 40.64 3.86
550 777 2.945668 GAGAAGTATGTGGTGGATTGGC 59.054 50.000 0.00 0.00 0.00 4.52
551 778 2.024414 GAAGTATGTGGTGGATTGGCC 58.976 52.381 0.00 0.00 37.10 5.36
553 780 1.453015 TATGTGGTGGATTGGCCGC 60.453 57.895 0.00 0.00 46.77 6.53
560 787 1.377202 TGGATTGGCCGCTCTTCAC 60.377 57.895 0.00 0.00 40.66 3.18
565 792 2.815647 GGCCGCTCTTCACCTTCG 60.816 66.667 0.00 0.00 0.00 3.79
567 794 2.657237 CCGCTCTTCACCTTCGGT 59.343 61.111 0.00 0.00 35.75 4.69
590 817 0.104120 TCATAGATTCCACGGGCGTG 59.896 55.000 0.00 0.00 45.02 5.34
610 837 3.005897 GTGTCTACTCCAGCACAAAGAGA 59.994 47.826 0.00 0.00 33.84 3.10
629 856 8.382875 CAAAGAGAAAAAGAAAAACATGTGGTC 58.617 33.333 0.00 0.00 0.00 4.02
630 857 6.573434 AGAGAAAAAGAAAAACATGTGGTCC 58.427 36.000 0.00 0.00 0.00 4.46
676 903 4.757149 GGCCAGCTCTATTAGTTGTAATGG 59.243 45.833 0.00 0.00 34.78 3.16
677 904 4.757149 GCCAGCTCTATTAGTTGTAATGGG 59.243 45.833 0.00 0.00 34.78 4.00
685 912 9.613428 CTCTATTAGTTGTAATGGGAATGTTGA 57.387 33.333 0.00 0.00 30.05 3.18
692 922 9.054922 AGTTGTAATGGGAATGTTGAATTTTTG 57.945 29.630 0.00 0.00 0.00 2.44
704 934 8.816640 ATGTTGAATTTTTGTATTGACCTGAC 57.183 30.769 0.00 0.00 0.00 3.51
724 954 4.081862 TGACTACAATCGGGTCGAAAAGAT 60.082 41.667 0.00 0.00 39.99 2.40
750 980 6.012945 AGTCTAAGCCTTCTTGAAGAAATCCT 60.013 38.462 9.15 2.94 33.19 3.24
754 1013 6.737720 AGCCTTCTTGAAGAAATCCTTTTT 57.262 33.333 9.15 0.00 33.19 1.94
780 1039 1.419387 GTAGCTGAGAAGCCCCATGAT 59.581 52.381 0.00 0.00 34.90 2.45
791 1060 5.835280 AGAAGCCCCATGATTAAACCTTATG 59.165 40.000 0.00 0.00 0.00 1.90
792 1061 4.482990 AGCCCCATGATTAAACCTTATGG 58.517 43.478 0.00 0.00 38.37 2.74
813 1082 4.253685 GGTGTGTCTACATGCTACATGTT 58.746 43.478 17.51 3.76 39.39 2.71
814 1083 4.695455 GGTGTGTCTACATGCTACATGTTT 59.305 41.667 17.51 0.00 39.39 2.83
840 1109 7.428282 TGTAATGTAATGTGTGTTGTAGTGG 57.572 36.000 0.00 0.00 0.00 4.00
850 1119 3.827302 TGTGTTGTAGTGGGTGTTTGTTT 59.173 39.130 0.00 0.00 0.00 2.83
866 1135 5.602145 TGTTTGTTTTGGAGAAGGAATGGAT 59.398 36.000 0.00 0.00 0.00 3.41
867 1136 5.982890 TTGTTTTGGAGAAGGAATGGATC 57.017 39.130 0.00 0.00 0.00 3.36
893 1162 4.735132 TGGCGCGAGGGAGAAACG 62.735 66.667 12.10 0.00 0.00 3.60
909 1189 8.985922 AGGGAGAAACGTAACCTAAAGTATTAT 58.014 33.333 0.00 0.00 0.00 1.28
933 1213 4.756630 CAAGTGGTTTGCTTGGGC 57.243 55.556 0.00 0.00 39.53 5.36
934 1214 1.069596 CAAGTGGTTTGCTTGGGCC 59.930 57.895 0.00 0.00 39.53 5.80
935 1215 1.382420 AAGTGGTTTGCTTGGGCCA 60.382 52.632 0.00 0.00 37.74 5.36
1019 1305 3.007973 GCTGGAGTCCGACCTGACC 62.008 68.421 4.30 0.00 35.83 4.02
1020 1306 1.304547 CTGGAGTCCGACCTGACCT 60.305 63.158 4.30 0.00 35.83 3.85
1021 1307 1.599606 CTGGAGTCCGACCTGACCTG 61.600 65.000 4.30 0.00 35.83 4.00
1023 1309 2.997897 AGTCCGACCTGACCTGGC 60.998 66.667 0.00 0.00 35.83 4.85
1024 1310 3.311110 GTCCGACCTGACCTGGCA 61.311 66.667 0.00 0.00 0.00 4.92
1025 1311 2.284625 TCCGACCTGACCTGGCAT 60.285 61.111 0.00 0.00 0.00 4.40
1026 1312 2.187946 CCGACCTGACCTGGCATC 59.812 66.667 0.00 0.00 0.00 3.91
1027 1313 2.659063 CCGACCTGACCTGGCATCA 61.659 63.158 0.00 0.00 0.00 3.07
1028 1314 1.524002 CGACCTGACCTGGCATCAT 59.476 57.895 0.00 0.00 0.00 2.45
1046 1334 3.636679 TCATCCATCGTCTTCTTCCTCT 58.363 45.455 0.00 0.00 0.00 3.69
1047 1335 3.382865 TCATCCATCGTCTTCTTCCTCTG 59.617 47.826 0.00 0.00 0.00 3.35
1048 1336 2.808919 TCCATCGTCTTCTTCCTCTGT 58.191 47.619 0.00 0.00 0.00 3.41
1049 1337 2.755655 TCCATCGTCTTCTTCCTCTGTC 59.244 50.000 0.00 0.00 0.00 3.51
1050 1338 2.757868 CCATCGTCTTCTTCCTCTGTCT 59.242 50.000 0.00 0.00 0.00 3.41
1051 1339 3.181491 CCATCGTCTTCTTCCTCTGTCTC 60.181 52.174 0.00 0.00 0.00 3.36
1052 1340 3.426787 TCGTCTTCTTCCTCTGTCTCT 57.573 47.619 0.00 0.00 0.00 3.10
1084 1372 1.076187 AGCTTTCCCCTTCCTTCCTTG 59.924 52.381 0.00 0.00 0.00 3.61
1099 1387 1.033746 CCTTGCGCACCAATCCATCT 61.034 55.000 11.12 0.00 31.91 2.90
1100 1388 0.099968 CTTGCGCACCAATCCATCTG 59.900 55.000 11.12 0.00 31.91 2.90
1102 1390 1.026182 TGCGCACCAATCCATCTGTC 61.026 55.000 5.66 0.00 0.00 3.51
1103 1391 2.009108 CGCACCAATCCATCTGTCG 58.991 57.895 0.00 0.00 0.00 4.35
1104 1392 1.431488 CGCACCAATCCATCTGTCGG 61.431 60.000 0.00 0.00 0.00 4.79
1105 1393 1.718757 GCACCAATCCATCTGTCGGC 61.719 60.000 0.00 0.00 0.00 5.54
1106 1394 1.097547 CACCAATCCATCTGTCGGCC 61.098 60.000 0.00 0.00 0.00 6.13
1107 1395 1.889105 CCAATCCATCTGTCGGCCG 60.889 63.158 22.12 22.12 0.00 6.13
1108 1396 1.143838 CAATCCATCTGTCGGCCGA 59.856 57.895 27.28 27.28 0.00 5.54
1109 1397 0.250038 CAATCCATCTGTCGGCCGAT 60.250 55.000 33.58 13.06 0.00 4.18
1110 1398 0.034059 AATCCATCTGTCGGCCGATC 59.966 55.000 33.58 24.05 0.00 3.69
1111 1399 2.147315 ATCCATCTGTCGGCCGATCG 62.147 60.000 33.58 24.28 0.00 3.69
1112 1400 2.721859 CATCTGTCGGCCGATCGA 59.278 61.111 33.58 28.51 36.76 3.59
1113 1401 1.287191 CATCTGTCGGCCGATCGAT 59.713 57.895 33.58 29.35 41.40 3.59
1114 1402 0.319040 CATCTGTCGGCCGATCGATT 60.319 55.000 33.58 16.10 41.40 3.34
1115 1403 0.039074 ATCTGTCGGCCGATCGATTC 60.039 55.000 33.58 17.93 41.40 2.52
1117 1405 3.395687 GTCGGCCGATCGATTCGC 61.396 66.667 33.58 12.16 46.71 4.70
1118 1406 4.640855 TCGGCCGATCGATTCGCC 62.641 66.667 27.28 19.15 46.71 5.54
1162 1450 2.537560 GGCCACGCAATCCAGATCG 61.538 63.158 0.00 0.00 0.00 3.69
1163 1451 3.017323 CCACGCAATCCAGATCGC 58.983 61.111 0.00 0.00 0.00 4.58
1164 1452 2.537560 CCACGCAATCCAGATCGCC 61.538 63.158 0.00 0.00 0.00 5.54
1165 1453 2.586079 ACGCAATCCAGATCGCCG 60.586 61.111 0.00 0.00 0.00 6.46
1167 1455 3.654020 GCAATCCAGATCGCCGCC 61.654 66.667 0.00 0.00 0.00 6.13
1169 1457 4.609018 AATCCAGATCGCCGCCCG 62.609 66.667 0.00 0.00 38.61 6.13
1237 1525 0.734253 CCTCAGCTCAGGTTCGTTCG 60.734 60.000 0.00 0.00 0.00 3.95
1238 1526 0.734253 CTCAGCTCAGGTTCGTTCGG 60.734 60.000 0.00 0.00 0.00 4.30
1274 1579 1.818363 CGATCTCCACGGACCTCGA 60.818 63.158 6.68 0.00 42.43 4.04
1279 1584 1.077930 TCCACGGACCTCGACCTAG 60.078 63.158 0.00 0.00 42.43 3.02
1284 1589 1.716826 CGGACCTCGACCTAGCACTC 61.717 65.000 0.00 0.00 42.43 3.51
1289 1594 1.948145 CCTCGACCTAGCACTCGTTAT 59.052 52.381 0.00 0.00 0.00 1.89
1294 1599 2.353889 GACCTAGCACTCGTTATCGACA 59.646 50.000 0.00 0.00 41.35 4.35
1296 1601 3.243101 ACCTAGCACTCGTTATCGACATG 60.243 47.826 0.00 0.00 41.35 3.21
1326 1631 1.039068 ATGAGACGCTGCTGCTCTAT 58.961 50.000 14.03 7.30 36.97 1.98
1335 1640 4.983628 CTGCTCTATAGGCCGCAG 57.016 61.111 18.42 18.42 43.10 5.18
1336 1641 1.373999 CTGCTCTATAGGCCGCAGC 60.374 63.158 19.34 12.72 42.66 5.25
1362 1667 8.836735 CCCCACTAGGAATTAGTATCCATTATT 58.163 37.037 0.00 0.00 40.68 1.40
1394 1703 9.160496 GATAGTAGATTTCAGCCATGATTTAGG 57.840 37.037 0.00 0.00 34.73 2.69
1403 1722 2.620585 GCCATGATTTAGGCCTTGTCTC 59.379 50.000 12.58 3.80 45.18 3.36
1407 1726 5.420104 CCATGATTTAGGCCTTGTCTCTTTT 59.580 40.000 12.58 0.00 0.00 2.27
1408 1727 6.071165 CCATGATTTAGGCCTTGTCTCTTTTT 60.071 38.462 12.58 0.00 0.00 1.94
1429 1757 7.481275 TTTTTCAAAAATCAATCTGTCAGCC 57.519 32.000 0.00 0.00 0.00 4.85
1451 1779 2.673368 GACCGTCTTAATTCAGCCACTG 59.327 50.000 0.00 0.00 0.00 3.66
1466 1794 0.250467 CACTGCACAACTAGCCAGGT 60.250 55.000 0.00 0.00 0.00 4.00
1473 1801 3.214328 CACAACTAGCCAGGTTTGTCTT 58.786 45.455 0.00 0.00 0.00 3.01
1502 1833 9.693739 TTTCTTATTATCAAATCAACTGGCCTA 57.306 29.630 3.32 0.00 0.00 3.93
1503 1834 8.677148 TCTTATTATCAAATCAACTGGCCTAC 57.323 34.615 3.32 0.00 0.00 3.18
1504 1835 8.494433 TCTTATTATCAAATCAACTGGCCTACT 58.506 33.333 3.32 0.00 0.00 2.57
1507 1838 4.640771 TCAAATCAACTGGCCTACTCTT 57.359 40.909 3.32 0.00 0.00 2.85
1519 1850 3.498777 GGCCTACTCTTTGTTCACTTCAC 59.501 47.826 0.00 0.00 0.00 3.18
1531 1862 6.312399 TGTTCACTTCACATGACAAATACC 57.688 37.500 0.00 0.00 0.00 2.73
1533 1864 6.017192 TGTTCACTTCACATGACAAATACCTG 60.017 38.462 0.00 0.00 0.00 4.00
1539 1875 5.804639 TCACATGACAAATACCTGCTACTT 58.195 37.500 0.00 0.00 0.00 2.24
1540 1876 6.237901 TCACATGACAAATACCTGCTACTTT 58.762 36.000 0.00 0.00 0.00 2.66
1541 1877 6.371548 TCACATGACAAATACCTGCTACTTTC 59.628 38.462 0.00 0.00 0.00 2.62
1554 1897 5.123027 CCTGCTACTTTCCTTTGTTCAGATC 59.877 44.000 0.00 0.00 0.00 2.75
1589 1932 4.960866 CCAGCACCAGCACCAGCA 62.961 66.667 0.00 0.00 45.49 4.41
1590 1933 3.667282 CAGCACCAGCACCAGCAC 61.667 66.667 0.00 0.00 45.49 4.40
1625 1979 1.550327 TGAACAGCACCCAAACACAA 58.450 45.000 0.00 0.00 0.00 3.33
1629 1983 0.528249 CAGCACCCAAACACAAGCAC 60.528 55.000 0.00 0.00 0.00 4.40
1631 1985 1.806568 CACCCAAACACAAGCACGT 59.193 52.632 0.00 0.00 0.00 4.49
1661 2015 1.772836 AGGCTTTCAATGGATGCCTC 58.227 50.000 14.58 0.00 44.70 4.70
1662 2016 1.287146 AGGCTTTCAATGGATGCCTCT 59.713 47.619 14.58 0.00 44.70 3.69
1668 2022 6.467677 GCTTTCAATGGATGCCTCTACTATA 58.532 40.000 0.00 0.00 0.00 1.31
1675 2029 6.852420 TGGATGCCTCTACTATATTACCAC 57.148 41.667 0.00 0.00 0.00 4.16
1691 2046 0.102120 CCACGCTTCCTTTTTGCACA 59.898 50.000 0.00 0.00 0.00 4.57
1692 2047 1.199624 CACGCTTCCTTTTTGCACAC 58.800 50.000 0.00 0.00 0.00 3.82
1693 2048 0.814457 ACGCTTCCTTTTTGCACACA 59.186 45.000 0.00 0.00 0.00 3.72
1694 2049 1.203523 ACGCTTCCTTTTTGCACACAA 59.796 42.857 0.00 0.00 0.00 3.33
1695 2050 2.266554 CGCTTCCTTTTTGCACACAAA 58.733 42.857 0.00 0.00 43.97 2.83
1706 2061 5.843673 TTTGCACACAAAAGATAGTGGAA 57.156 34.783 0.00 0.00 42.73 3.53
1707 2062 6.403866 TTTGCACACAAAAGATAGTGGAAT 57.596 33.333 0.00 0.00 42.73 3.01
1712 2084 6.183360 GCACACAAAAGATAGTGGAATACCTC 60.183 42.308 0.00 0.00 39.99 3.85
1737 2109 2.555325 TCAACTGCCTGATTGCTTTCAG 59.445 45.455 8.89 8.89 42.31 3.02
1749 2121 4.893424 TTGCTTTCAGTTCAGTACCAAC 57.107 40.909 0.00 0.00 0.00 3.77
1823 2229 7.069950 ATCTAACAGATGCTTGTACTGGATACA 59.930 37.037 0.00 0.00 37.75 2.29
1865 2271 0.179045 AGCAAACCACTTCGCTGTCT 60.179 50.000 0.00 0.00 32.33 3.41
1870 2276 4.712763 CAAACCACTTCGCTGTCTAAATC 58.287 43.478 0.00 0.00 0.00 2.17
1922 2471 6.656314 TTGTACCATTAAACAGACTATGCG 57.344 37.500 0.00 0.00 0.00 4.73
1966 2563 3.924114 TGGATGGATGATGTTTACGGT 57.076 42.857 0.00 0.00 0.00 4.83
2002 2620 2.639286 CAGCACTTCACGCCCAAC 59.361 61.111 0.00 0.00 0.00 3.77
2008 2626 1.021968 ACTTCACGCCCAACAAAGAC 58.978 50.000 0.00 0.00 0.00 3.01
2026 2652 4.776322 CCCATGGACGCTGCCGAA 62.776 66.667 15.22 0.00 38.29 4.30
2099 2740 4.037208 ACTGATGGCTGTCAAAGACTTTTG 59.963 41.667 0.00 0.00 44.03 2.44
2152 2799 1.094785 ACTGACACGCTTGCTGTTTT 58.905 45.000 0.00 0.00 0.00 2.43
2155 2802 0.572125 GACACGCTTGCTGTTTTTGC 59.428 50.000 0.00 0.00 0.00 3.68
2159 2806 1.219646 CGCTTGCTGTTTTTGCCAAT 58.780 45.000 0.00 0.00 0.00 3.16
2160 2807 2.223923 ACGCTTGCTGTTTTTGCCAATA 60.224 40.909 0.00 0.00 0.00 1.90
2162 2809 3.181528 CGCTTGCTGTTTTTGCCAATATG 60.182 43.478 0.00 0.00 0.00 1.78
2163 2810 3.995705 GCTTGCTGTTTTTGCCAATATGA 59.004 39.130 0.00 0.00 0.00 2.15
2164 2811 4.092383 GCTTGCTGTTTTTGCCAATATGAG 59.908 41.667 0.00 0.00 0.00 2.90
2208 3042 0.669625 CCCGAAACGAGTCAAGGGAC 60.670 60.000 0.00 0.00 44.66 4.46
2284 3118 2.758979 ACGAGGATGACGACAAGGTTAT 59.241 45.455 0.00 0.00 34.70 1.89
2285 3119 3.116300 CGAGGATGACGACAAGGTTATG 58.884 50.000 0.00 0.00 0.00 1.90
2292 3126 6.537301 GGATGACGACAAGGTTATGATGTTTA 59.463 38.462 0.00 0.00 0.00 2.01
2294 3128 5.640357 TGACGACAAGGTTATGATGTTTACC 59.360 40.000 0.00 0.00 0.00 2.85
2296 3130 5.642063 ACGACAAGGTTATGATGTTTACCAG 59.358 40.000 0.00 0.00 33.02 4.00
2342 3202 5.767168 GGCCTCTGTTTCTGATAATGCTAAT 59.233 40.000 0.00 0.00 0.00 1.73
2344 3204 7.095017 GGCCTCTGTTTCTGATAATGCTAATAC 60.095 40.741 0.00 0.00 0.00 1.89
2427 3287 0.603707 AAATCGCCGATGCCGATGAT 60.604 50.000 0.00 0.00 43.90 2.45
2430 3290 1.212751 CGCCGATGCCGATGATAGA 59.787 57.895 0.00 0.00 38.22 1.98
2440 3300 2.870175 CCGATGATAGAGAGTCCCAGT 58.130 52.381 0.00 0.00 0.00 4.00
2456 3316 2.021457 CCAGTTAAAAGCCCGGTATGG 58.979 52.381 0.00 0.00 37.55 2.74
2461 3321 2.296073 AAAAGCCCGGTATGGTGAAA 57.704 45.000 0.00 0.00 35.15 2.69
2463 3323 1.762708 AAGCCCGGTATGGTGAAATG 58.237 50.000 0.00 0.00 35.15 2.32
2484 3344 2.814336 GCCCCTTCAATATTTAGCCTCG 59.186 50.000 0.00 0.00 0.00 4.63
2591 3454 7.969536 TTAGCATTGCAGGTTAGAGAATATC 57.030 36.000 11.91 0.00 0.00 1.63
2885 3755 7.820648 ACAGGTAAGATAAAGCTTTTGACATG 58.179 34.615 18.47 12.79 0.00 3.21
2916 3792 2.738314 CAATCACAGATGAACACGCAGA 59.262 45.455 0.00 0.00 38.69 4.26
2920 3796 2.096565 CACAGATGAACACGCAGAACTG 60.097 50.000 0.00 0.00 0.00 3.16
2953 3829 1.202222 GCCATGCTGAACCTGAATTCG 60.202 52.381 0.04 0.00 0.00 3.34
2961 3837 4.271291 GCTGAACCTGAATTCGAGTAATCC 59.729 45.833 0.04 0.00 0.00 3.01
3010 3886 6.998673 ACTTGCTCACTAGACATTAAAAACCT 59.001 34.615 0.00 0.00 0.00 3.50
3068 3944 3.760684 ACCTGAATCACATTTCTCTTGGC 59.239 43.478 0.00 0.00 0.00 4.52
3084 3960 1.200839 GGCGTCGTGTTCTTTGTCG 59.799 57.895 0.00 0.00 0.00 4.35
3086 3962 0.381428 GCGTCGTGTTCTTTGTCGTG 60.381 55.000 0.00 0.00 0.00 4.35
3109 4120 4.305769 CTGAACCTGAACTTGAGTCTGAG 58.694 47.826 0.00 0.00 0.00 3.35
3187 4200 1.975407 CGACGTGGTGGAGGTAGGT 60.975 63.158 0.00 0.00 0.00 3.08
3301 4314 1.745653 TGTGAGATACAGGTGAGCGAG 59.254 52.381 0.00 0.00 33.42 5.03
3304 4317 1.003331 GAGATACAGGTGAGCGAGACG 60.003 57.143 0.00 0.00 0.00 4.18
3334 4356 4.080751 CCCCTAACCGAAACTTGGATCTTA 60.081 45.833 0.00 0.00 0.00 2.10
3349 4371 9.634021 ACTTGGATCTTAAGAAGGGAATTTATC 57.366 33.333 9.71 0.00 0.00 1.75
3353 4375 9.727859 GGATCTTAAGAAGGGAATTTATCTACC 57.272 37.037 9.71 0.00 0.00 3.18
3363 4404 4.385825 GAATTTATCTACCCCATGCACGA 58.614 43.478 0.00 0.00 0.00 4.35
3365 4406 3.469008 TTATCTACCCCATGCACGAAG 57.531 47.619 0.00 0.00 0.00 3.79
3388 4429 9.744468 GAAGTGATATACCAAGTTTTTGTTGTT 57.256 29.630 0.00 0.00 32.21 2.83
3392 4433 8.470805 TGATATACCAAGTTTTTGTTGTTGTGT 58.529 29.630 0.00 0.00 32.21 3.72
3393 4434 6.959671 ATACCAAGTTTTTGTTGTTGTGTG 57.040 33.333 0.00 0.00 32.21 3.82
3403 4444 1.729517 GTTGTTGTGTGGTTTTGTGGC 59.270 47.619 0.00 0.00 0.00 5.01
3491 4532 1.080434 GAAGAGCAAGACGAGCGGT 60.080 57.895 0.00 0.00 37.01 5.68
3502 4543 1.592669 CGAGCGGTGGATGGTGATC 60.593 63.158 0.00 0.00 0.00 2.92
3663 4726 0.108615 AGCGTGTAAGCAGCTGTAGG 60.109 55.000 16.64 4.31 40.07 3.18
3668 4731 1.067846 TGTAAGCAGCTGTAGGTGACG 60.068 52.381 16.64 0.00 45.66 4.35
3671 4734 2.943978 GCAGCTGTAGGTGACGGGT 61.944 63.158 16.64 0.00 46.32 5.28
3674 4737 0.034896 AGCTGTAGGTGACGGGTTTG 59.965 55.000 0.00 0.00 42.70 2.93
3678 4741 2.946990 CTGTAGGTGACGGGTTTGTTTT 59.053 45.455 0.00 0.00 0.00 2.43
3679 4742 2.944349 TGTAGGTGACGGGTTTGTTTTC 59.056 45.455 0.00 0.00 0.00 2.29
3688 4751 1.611491 GGGTTTGTTTTCGCAGGATGA 59.389 47.619 0.00 0.00 39.69 2.92
3695 4758 5.295431 TGTTTTCGCAGGATGATTAACAG 57.705 39.130 0.00 0.00 39.69 3.16
3696 4759 5.000591 TGTTTTCGCAGGATGATTAACAGA 58.999 37.500 0.00 0.00 39.69 3.41
3697 4760 5.647658 TGTTTTCGCAGGATGATTAACAGAT 59.352 36.000 0.00 0.00 39.69 2.90
3698 4761 5.991328 TTTCGCAGGATGATTAACAGATC 57.009 39.130 0.00 0.00 39.69 2.75
3701 4764 4.100035 TCGCAGGATGATTAACAGATCTGT 59.900 41.667 22.89 22.89 42.67 3.41
3703 4766 5.985530 CGCAGGATGATTAACAGATCTGTTA 59.014 40.000 34.29 34.29 45.84 2.41
3743 4813 7.833682 TGGGCAGAATGAATAAGTTTCTATTGA 59.166 33.333 0.00 0.00 39.69 2.57
3752 4822 9.638239 TGAATAAGTTTCTATTGATGTTTTGCC 57.362 29.630 0.00 0.00 0.00 4.52
3762 4832 2.168106 TGATGTTTTGCCTGTTGTTGCT 59.832 40.909 0.00 0.00 0.00 3.91
3766 4836 0.464870 TTTGCCTGTTGTTGCTGCAT 59.535 45.000 1.84 0.00 0.00 3.96
3768 4838 0.464870 TGCCTGTTGTTGCTGCATTT 59.535 45.000 1.84 0.00 0.00 2.32
3787 4862 5.185056 GCATTTAATTTAGTGGGTGAGGTGT 59.815 40.000 0.00 0.00 0.00 4.16
3811 4886 1.198637 GAGCGAAGATTGCAAGCAACT 59.801 47.619 18.24 7.93 38.88 3.16
3813 4888 3.012518 AGCGAAGATTGCAAGCAACTAT 58.987 40.909 18.24 0.00 38.88 2.12
3814 4889 4.191544 AGCGAAGATTGCAAGCAACTATA 58.808 39.130 18.24 0.00 38.88 1.31
3815 4890 4.272018 AGCGAAGATTGCAAGCAACTATAG 59.728 41.667 18.24 0.00 38.88 1.31
3888 4968 6.211584 AGCACTAGATTTGAGTTGGAAGAGTA 59.788 38.462 0.00 0.00 0.00 2.59
4054 5136 7.575414 TCTATTTAATTAATGGGCGCTTGAA 57.425 32.000 7.64 0.00 0.00 2.69
4057 5139 5.652994 TTAATTAATGGGCGCTTGAAGTT 57.347 34.783 7.64 0.00 0.00 2.66
4065 5147 1.073199 CGCTTGAAGTTGGGGAGGT 59.927 57.895 0.00 0.00 0.00 3.85
4066 5148 0.537371 CGCTTGAAGTTGGGGAGGTT 60.537 55.000 0.00 0.00 0.00 3.50
4067 5149 1.704641 GCTTGAAGTTGGGGAGGTTT 58.295 50.000 0.00 0.00 0.00 3.27
4068 5150 1.341209 GCTTGAAGTTGGGGAGGTTTG 59.659 52.381 0.00 0.00 0.00 2.93
4069 5151 2.944129 CTTGAAGTTGGGGAGGTTTGA 58.056 47.619 0.00 0.00 0.00 2.69
4070 5152 3.500343 CTTGAAGTTGGGGAGGTTTGAT 58.500 45.455 0.00 0.00 0.00 2.57
4071 5153 3.154827 TGAAGTTGGGGAGGTTTGATC 57.845 47.619 0.00 0.00 0.00 2.92
4072 5154 2.225017 TGAAGTTGGGGAGGTTTGATCC 60.225 50.000 0.00 0.00 35.99 3.36
4085 5167 3.797353 GATCCCCTTCCGGCTGCA 61.797 66.667 0.50 0.00 0.00 4.41
4086 5168 4.115199 ATCCCCTTCCGGCTGCAC 62.115 66.667 0.50 0.00 0.00 4.57
4137 5236 3.560989 CCTCTGGGGCTCATCTCC 58.439 66.667 0.00 0.00 0.00 3.71
4138 5237 2.506061 CCTCTGGGGCTCATCTCCG 61.506 68.421 0.00 0.00 0.00 4.63
4139 5238 3.157252 TCTGGGGCTCATCTCCGC 61.157 66.667 0.00 0.00 37.10 5.54
4179 5278 1.039068 GCTCCTAGCAGCATCTCTCA 58.961 55.000 0.00 0.00 41.89 3.27
4180 5279 1.619827 GCTCCTAGCAGCATCTCTCAT 59.380 52.381 0.00 0.00 41.89 2.90
4190 5289 0.818445 CATCTCTCATGGGTGGCAGC 60.818 60.000 8.47 8.47 0.00 5.25
4225 5324 1.285950 GCGGGCTTTGGTTCTTGAC 59.714 57.895 0.00 0.00 0.00 3.18
4246 5345 0.471617 CCAGCCCAACCTATGAGGAG 59.528 60.000 0.00 0.00 37.67 3.69
4282 5381 6.299141 AGTGAGAAGTGTGTTACATTGGATT 58.701 36.000 0.00 0.00 0.00 3.01
4287 5386 4.985538 AGTGTGTTACATTGGATTGACCT 58.014 39.130 0.00 0.00 39.86 3.85
4308 5407 9.444600 TGACCTAAATGATGAGGTTAAACTTAC 57.555 33.333 0.00 0.00 46.36 2.34
4338 5437 0.322546 GATGTTGGAGTGGGGGTGAC 60.323 60.000 0.00 0.00 0.00 3.67
4343 5442 2.214920 GGAGTGGGGGTGACGTCTT 61.215 63.158 17.92 0.00 0.00 3.01
4344 5443 1.292541 GAGTGGGGGTGACGTCTTC 59.707 63.158 17.92 9.74 0.00 2.87
4345 5444 1.458777 AGTGGGGGTGACGTCTTCA 60.459 57.895 17.92 5.09 0.00 3.02
4368 5467 3.362706 TGAAGAGTACGCCTATCACCTT 58.637 45.455 0.00 0.00 0.00 3.50
4384 5483 3.645212 TCACCTTGGAATTGCATTGGAAA 59.355 39.130 20.63 9.24 0.00 3.13
4395 5494 3.826524 TGCATTGGAAAGTGTACAAGGA 58.173 40.909 0.00 0.00 0.00 3.36
4450 5549 4.806640 ATTATTTGCCACCAAGGTTGAG 57.193 40.909 0.00 0.00 40.61 3.02
4452 5551 0.032615 TTTGCCACCAAGGTTGAGGT 60.033 50.000 0.00 0.00 40.61 3.85
4459 5558 2.637872 CACCAAGGTTGAGGTTCCTCTA 59.362 50.000 18.07 9.31 35.52 2.43
4460 5559 3.264450 CACCAAGGTTGAGGTTCCTCTAT 59.736 47.826 18.07 1.31 35.52 1.98
4463 5562 5.731678 ACCAAGGTTGAGGTTCCTCTATTAT 59.268 40.000 18.07 1.89 33.39 1.28
4475 5574 9.853177 AGGTTCCTCTATTATAAATTGACTTGG 57.147 33.333 0.00 0.00 0.00 3.61
4488 5587 2.361610 CTTGGACCGGCATGCCTT 60.362 61.111 33.07 20.65 0.00 4.35
4491 5590 2.514824 GGACCGGCATGCCTTCTC 60.515 66.667 33.07 22.45 0.00 2.87
4503 5602 2.204463 TGCCTTCTCCCCAATACATGA 58.796 47.619 0.00 0.00 0.00 3.07
4504 5603 2.785269 TGCCTTCTCCCCAATACATGAT 59.215 45.455 0.00 0.00 0.00 2.45
4505 5604 3.980022 TGCCTTCTCCCCAATACATGATA 59.020 43.478 0.00 0.00 0.00 2.15
4587 5686 6.938596 TCAAATGAAGCGGAGATGAATGATAT 59.061 34.615 0.00 0.00 0.00 1.63
4608 5707 9.100197 TGATATAGCCATAGTAATTCAAGACCA 57.900 33.333 0.00 0.00 0.00 4.02
4610 5709 9.950496 ATATAGCCATAGTAATTCAAGACCAAG 57.050 33.333 0.00 0.00 0.00 3.61
4624 5723 6.656902 TCAAGACCAAGAGATTCATGCTATT 58.343 36.000 0.00 0.00 0.00 1.73
4645 5759 5.494632 TTGCTCATGTTGATGATGATGAC 57.505 39.130 0.00 0.00 37.97 3.06
4648 5762 4.084485 GCTCATGTTGATGATGATGACGAG 60.084 45.833 0.00 0.00 37.97 4.18
4669 5783 5.619220 GAGGATGCTTATGTGGAAGAAGAT 58.381 41.667 0.00 0.00 0.00 2.40
4672 5786 6.002704 GGATGCTTATGTGGAAGAAGATGAT 58.997 40.000 0.00 0.00 0.00 2.45
4673 5787 6.072618 GGATGCTTATGTGGAAGAAGATGATG 60.073 42.308 0.00 0.00 0.00 3.07
4677 6894 6.709397 GCTTATGTGGAAGAAGATGATGATGA 59.291 38.462 0.00 0.00 0.00 2.92
4682 6899 5.523188 GTGGAAGAAGATGATGATGACTCAC 59.477 44.000 0.00 0.00 33.22 3.51
4704 6921 3.655486 TCGTCCAATGATAACGTGTTGT 58.345 40.909 0.00 0.00 37.64 3.32
4724 6941 0.240945 CGGTGGCCTTTGCTTTAGTG 59.759 55.000 3.32 0.00 37.74 2.74
4734 6951 0.685097 TGCTTTAGTGCCTTCCGAGT 59.315 50.000 0.00 0.00 0.00 4.18
4736 6953 2.269172 GCTTTAGTGCCTTCCGAGTAC 58.731 52.381 0.00 0.00 0.00 2.73
4748 6965 1.805943 TCCGAGTACGACGACAATTGA 59.194 47.619 13.59 2.67 42.66 2.57
4812 7029 6.983906 ATATGGAGGTATGCATCATATCGA 57.016 37.500 0.19 0.00 38.58 3.59
4815 7032 4.528206 TGGAGGTATGCATCATATCGAACT 59.472 41.667 0.19 0.00 33.14 3.01
4850 7067 4.640771 TCTCAAGGCCATAGAAGTTGTT 57.359 40.909 5.01 0.00 0.00 2.83
4856 7073 4.451900 AGGCCATAGAAGTTGTTATTCCG 58.548 43.478 5.01 0.00 0.00 4.30
4859 7076 3.564225 CCATAGAAGTTGTTATTCCGGGC 59.436 47.826 0.00 0.00 0.00 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
69 70 6.604795 CCATTGTCATCCCATCTACTCTTTTT 59.395 38.462 0.00 0.00 0.00 1.94
70 71 6.069440 TCCATTGTCATCCCATCTACTCTTTT 60.069 38.462 0.00 0.00 0.00 2.27
71 72 5.429762 TCCATTGTCATCCCATCTACTCTTT 59.570 40.000 0.00 0.00 0.00 2.52
72 73 4.971282 TCCATTGTCATCCCATCTACTCTT 59.029 41.667 0.00 0.00 0.00 2.85
73 74 4.560739 TCCATTGTCATCCCATCTACTCT 58.439 43.478 0.00 0.00 0.00 3.24
74 75 4.590647 TCTCCATTGTCATCCCATCTACTC 59.409 45.833 0.00 0.00 0.00 2.59
75 76 4.346418 GTCTCCATTGTCATCCCATCTACT 59.654 45.833 0.00 0.00 0.00 2.57
76 77 4.636249 GTCTCCATTGTCATCCCATCTAC 58.364 47.826 0.00 0.00 0.00 2.59
77 78 3.321968 CGTCTCCATTGTCATCCCATCTA 59.678 47.826 0.00 0.00 0.00 1.98
78 79 2.103771 CGTCTCCATTGTCATCCCATCT 59.896 50.000 0.00 0.00 0.00 2.90
79 80 2.103094 TCGTCTCCATTGTCATCCCATC 59.897 50.000 0.00 0.00 0.00 3.51
80 81 2.118679 TCGTCTCCATTGTCATCCCAT 58.881 47.619 0.00 0.00 0.00 4.00
81 82 1.567357 TCGTCTCCATTGTCATCCCA 58.433 50.000 0.00 0.00 0.00 4.37
82 83 2.158900 ACATCGTCTCCATTGTCATCCC 60.159 50.000 0.00 0.00 0.00 3.85
83 84 3.185246 ACATCGTCTCCATTGTCATCC 57.815 47.619 0.00 0.00 0.00 3.51
84 85 4.687948 CCATACATCGTCTCCATTGTCATC 59.312 45.833 0.00 0.00 0.00 2.92
85 86 4.635223 CCATACATCGTCTCCATTGTCAT 58.365 43.478 0.00 0.00 0.00 3.06
86 87 3.741075 GCCATACATCGTCTCCATTGTCA 60.741 47.826 0.00 0.00 0.00 3.58
87 88 2.802816 GCCATACATCGTCTCCATTGTC 59.197 50.000 0.00 0.00 0.00 3.18
88 89 2.435805 AGCCATACATCGTCTCCATTGT 59.564 45.455 0.00 0.00 0.00 2.71
89 90 3.117491 AGCCATACATCGTCTCCATTG 57.883 47.619 0.00 0.00 0.00 2.82
90 91 3.006967 GGTAGCCATACATCGTCTCCATT 59.993 47.826 0.00 0.00 33.21 3.16
91 92 2.563179 GGTAGCCATACATCGTCTCCAT 59.437 50.000 0.00 0.00 33.21 3.41
92 93 1.961394 GGTAGCCATACATCGTCTCCA 59.039 52.381 0.00 0.00 33.21 3.86
93 94 2.229302 GAGGTAGCCATACATCGTCTCC 59.771 54.545 0.00 0.00 33.46 3.71
94 95 3.562567 GAGGTAGCCATACATCGTCTC 57.437 52.381 0.00 0.00 33.46 3.36
99 100 1.068588 TGCACGAGGTAGCCATACATC 59.931 52.381 0.00 0.00 38.93 3.06
100 101 1.119684 TGCACGAGGTAGCCATACAT 58.880 50.000 0.00 0.00 33.21 2.29
101 102 0.899019 TTGCACGAGGTAGCCATACA 59.101 50.000 0.00 0.00 33.21 2.29
102 103 1.867233 CATTGCACGAGGTAGCCATAC 59.133 52.381 0.00 0.00 0.00 2.39
103 104 1.202639 CCATTGCACGAGGTAGCCATA 60.203 52.381 0.00 0.00 0.00 2.74
104 105 0.464373 CCATTGCACGAGGTAGCCAT 60.464 55.000 0.00 0.00 0.00 4.40
105 106 1.078497 CCATTGCACGAGGTAGCCA 60.078 57.895 0.00 0.00 0.00 4.75
106 107 0.179045 ATCCATTGCACGAGGTAGCC 60.179 55.000 0.00 0.00 0.00 3.93
107 108 0.940126 CATCCATTGCACGAGGTAGC 59.060 55.000 0.00 0.00 0.00 3.58
108 109 2.205074 GTCATCCATTGCACGAGGTAG 58.795 52.381 0.00 0.00 0.00 3.18
109 110 1.552792 TGTCATCCATTGCACGAGGTA 59.447 47.619 0.00 0.00 0.00 3.08
110 111 0.324614 TGTCATCCATTGCACGAGGT 59.675 50.000 0.00 0.00 0.00 3.85
111 112 1.452110 TTGTCATCCATTGCACGAGG 58.548 50.000 0.00 0.00 0.00 4.63
112 113 3.873361 ACTATTGTCATCCATTGCACGAG 59.127 43.478 0.00 0.00 0.00 4.18
113 114 3.872696 ACTATTGTCATCCATTGCACGA 58.127 40.909 0.00 0.00 0.00 4.35
114 115 4.621068 AACTATTGTCATCCATTGCACG 57.379 40.909 0.00 0.00 0.00 5.34
115 116 6.199937 AGAAACTATTGTCATCCATTGCAC 57.800 37.500 0.00 0.00 0.00 4.57
116 117 7.936496 TTAGAAACTATTGTCATCCATTGCA 57.064 32.000 0.00 0.00 0.00 4.08
117 118 8.844244 AGATTAGAAACTATTGTCATCCATTGC 58.156 33.333 0.00 0.00 0.00 3.56
119 120 9.911788 ACAGATTAGAAACTATTGTCATCCATT 57.088 29.630 0.00 0.00 0.00 3.16
130 131 9.784531 CCACCATGAATACAGATTAGAAACTAT 57.215 33.333 0.00 0.00 0.00 2.12
131 132 8.988060 TCCACCATGAATACAGATTAGAAACTA 58.012 33.333 0.00 0.00 0.00 2.24
132 133 7.861629 TCCACCATGAATACAGATTAGAAACT 58.138 34.615 0.00 0.00 0.00 2.66
162 163 5.981915 TCTTCATCGTAATCTCTTGCATGAG 59.018 40.000 20.70 20.70 35.52 2.90
165 166 4.742167 CGTCTTCATCGTAATCTCTTGCAT 59.258 41.667 0.00 0.00 0.00 3.96
179 180 4.238514 GGTAGCCATACATCGTCTTCATC 58.761 47.826 0.00 0.00 33.21 2.92
183 184 1.340248 CCGGTAGCCATACATCGTCTT 59.660 52.381 0.00 0.00 33.21 3.01
203 204 1.205893 ACTCTCCTCGAAACATGCTCC 59.794 52.381 0.00 0.00 0.00 4.70
217 218 2.022718 AGCCATCCCATCTACTCTCC 57.977 55.000 0.00 0.00 0.00 3.71
218 219 4.156477 AGTTAGCCATCCCATCTACTCTC 58.844 47.826 0.00 0.00 0.00 3.20
253 254 5.652891 AGCCCATGTCGTCTATATAAGGTAG 59.347 44.000 0.00 0.00 0.00 3.18
255 256 4.417437 AGCCCATGTCGTCTATATAAGGT 58.583 43.478 0.00 0.00 0.00 3.50
330 553 3.138304 GGGAACATGATAGTGCGCATAA 58.862 45.455 15.91 4.97 30.71 1.90
334 557 1.498865 CCGGGAACATGATAGTGCGC 61.499 60.000 0.00 0.00 0.00 6.09
335 558 0.179084 ACCGGGAACATGATAGTGCG 60.179 55.000 6.32 0.00 0.00 5.34
384 611 0.834687 ACCCCTAACGACAGCTTGGA 60.835 55.000 0.00 0.00 0.00 3.53
387 614 0.834687 TCCACCCCTAACGACAGCTT 60.835 55.000 0.00 0.00 0.00 3.74
389 616 0.252197 AATCCACCCCTAACGACAGC 59.748 55.000 0.00 0.00 0.00 4.40
416 643 5.340803 CGAGAACAAAACTCCATCGAGATA 58.659 41.667 0.00 0.00 38.52 1.98
422 649 3.619038 CCTAGCGAGAACAAAACTCCATC 59.381 47.826 0.00 0.00 0.00 3.51
426 653 1.732809 GCCCTAGCGAGAACAAAACTC 59.267 52.381 0.00 0.00 0.00 3.01
430 657 0.685097 ACTGCCCTAGCGAGAACAAA 59.315 50.000 0.00 0.00 44.31 2.83
449 676 1.880894 CTTCTGTCCACTACGGCGA 59.119 57.895 16.62 0.00 34.14 5.54
511 738 4.356405 TCTCCATCTCAACATTGTGTGT 57.644 40.909 0.00 0.00 44.84 3.72
512 739 4.758674 ACTTCTCCATCTCAACATTGTGTG 59.241 41.667 0.00 0.00 0.00 3.82
513 740 4.978099 ACTTCTCCATCTCAACATTGTGT 58.022 39.130 0.00 0.00 0.00 3.72
514 741 6.596888 ACATACTTCTCCATCTCAACATTGTG 59.403 38.462 0.00 0.00 0.00 3.33
515 742 6.596888 CACATACTTCTCCATCTCAACATTGT 59.403 38.462 0.00 0.00 0.00 2.71
525 752 4.696479 ATCCACCACATACTTCTCCATC 57.304 45.455 0.00 0.00 0.00 3.51
531 758 2.024414 GGCCAATCCACCACATACTTC 58.976 52.381 0.00 0.00 34.01 3.01
565 792 2.224066 CCCGTGGAATCTATGAGTCACC 60.224 54.545 0.00 0.00 0.00 4.02
567 794 1.412710 GCCCGTGGAATCTATGAGTCA 59.587 52.381 0.00 0.00 0.00 3.41
570 797 0.389391 ACGCCCGTGGAATCTATGAG 59.611 55.000 0.00 0.00 0.00 2.90
590 817 3.944055 TCTCTTTGTGCTGGAGTAGAC 57.056 47.619 0.00 0.00 0.00 2.59
610 837 5.079689 ACGGACCACATGTTTTTCTTTTT 57.920 34.783 0.00 0.00 0.00 1.94
629 856 3.788766 CGCGCCTCTCCAAAACGG 61.789 66.667 0.00 0.00 0.00 4.44
630 857 3.788766 CCGCGCCTCTCCAAAACG 61.789 66.667 0.00 0.00 0.00 3.60
654 881 4.757149 CCCATTACAACTAATAGAGCTGGC 59.243 45.833 0.00 0.00 0.00 4.85
658 885 8.345565 CAACATTCCCATTACAACTAATAGAGC 58.654 37.037 0.00 0.00 0.00 4.09
676 903 8.711457 CAGGTCAATACAAAAATTCAACATTCC 58.289 33.333 0.00 0.00 0.00 3.01
677 904 9.474920 TCAGGTCAATACAAAAATTCAACATTC 57.525 29.630 0.00 0.00 0.00 2.67
692 922 4.142004 ACCCGATTGTAGTCAGGTCAATAC 60.142 45.833 0.00 0.00 32.90 1.89
697 927 1.202268 CGACCCGATTGTAGTCAGGTC 60.202 57.143 0.00 0.00 40.32 3.85
704 934 5.589192 ACTATCTTTTCGACCCGATTGTAG 58.411 41.667 0.00 0.00 35.23 2.74
724 954 7.181125 AGGATTTCTTCAAGAAGGCTTAGACTA 59.819 37.037 0.00 0.00 35.37 2.59
761 1020 1.811778 ATCATGGGGCTTCTCAGCTA 58.188 50.000 0.00 0.00 46.44 3.32
771 1030 4.871933 CCATAAGGTTTAATCATGGGGC 57.128 45.455 0.00 0.00 33.87 5.80
791 1060 3.861840 ACATGTAGCATGTAGACACACC 58.138 45.455 12.42 0.00 37.54 4.16
792 1061 5.862924 AAACATGTAGCATGTAGACACAC 57.137 39.130 14.12 0.00 37.54 3.82
814 1083 9.157104 CCACTACAACACACATTACATTACATA 57.843 33.333 0.00 0.00 0.00 2.29
826 1095 2.750166 CAAACACCCACTACAACACACA 59.250 45.455 0.00 0.00 0.00 3.72
827 1096 2.750712 ACAAACACCCACTACAACACAC 59.249 45.455 0.00 0.00 0.00 3.82
828 1097 3.074675 ACAAACACCCACTACAACACA 57.925 42.857 0.00 0.00 0.00 3.72
829 1098 4.443913 AAACAAACACCCACTACAACAC 57.556 40.909 0.00 0.00 0.00 3.32
830 1099 4.322049 CCAAAACAAACACCCACTACAACA 60.322 41.667 0.00 0.00 0.00 3.33
831 1100 4.082136 TCCAAAACAAACACCCACTACAAC 60.082 41.667 0.00 0.00 0.00 3.32
832 1101 4.087182 TCCAAAACAAACACCCACTACAA 58.913 39.130 0.00 0.00 0.00 2.41
840 1109 4.729227 TTCCTTCTCCAAAACAAACACC 57.271 40.909 0.00 0.00 0.00 4.16
850 1119 2.863884 AGGGATCCATTCCTTCTCCAA 58.136 47.619 15.23 0.00 44.75 3.53
944 1224 1.448985 TTTGTATTGGGCTCACGCTC 58.551 50.000 0.00 0.00 37.07 5.03
950 1230 3.126343 CGTGTACCTTTTGTATTGGGCTC 59.874 47.826 0.00 0.00 0.00 4.70
965 1246 2.262603 GGACCGGAACCGTGTACC 59.737 66.667 9.46 6.11 37.81 3.34
1007 1293 2.579684 GATGCCAGGTCAGGTCGGAC 62.580 65.000 0.00 0.00 37.06 4.79
1019 1305 2.141517 GAAGACGATGGATGATGCCAG 58.858 52.381 0.00 0.00 42.15 4.85
1020 1306 1.764723 AGAAGACGATGGATGATGCCA 59.235 47.619 0.00 0.00 43.23 4.92
1021 1307 2.540265 AGAAGACGATGGATGATGCC 57.460 50.000 0.00 0.00 0.00 4.40
1023 1309 4.039004 AGAGGAAGAAGACGATGGATGATG 59.961 45.833 0.00 0.00 0.00 3.07
1024 1310 4.039004 CAGAGGAAGAAGACGATGGATGAT 59.961 45.833 0.00 0.00 0.00 2.45
1025 1311 3.382865 CAGAGGAAGAAGACGATGGATGA 59.617 47.826 0.00 0.00 0.00 2.92
1026 1312 3.131933 ACAGAGGAAGAAGACGATGGATG 59.868 47.826 0.00 0.00 0.00 3.51
1027 1313 3.370104 ACAGAGGAAGAAGACGATGGAT 58.630 45.455 0.00 0.00 0.00 3.41
1028 1314 2.755655 GACAGAGGAAGAAGACGATGGA 59.244 50.000 0.00 0.00 0.00 3.41
1046 1334 2.607750 GGGCTGGTGGGAGAGACA 60.608 66.667 0.00 0.00 0.00 3.41
1047 1335 2.607750 TGGGCTGGTGGGAGAGAC 60.608 66.667 0.00 0.00 0.00 3.36
1048 1336 2.284921 CTGGGCTGGTGGGAGAGA 60.285 66.667 0.00 0.00 0.00 3.10
1049 1337 4.106925 GCTGGGCTGGTGGGAGAG 62.107 72.222 0.00 0.00 0.00 3.20
1050 1338 4.664267 AGCTGGGCTGGTGGGAGA 62.664 66.667 0.00 0.00 37.57 3.71
1051 1339 3.215587 AAAGCTGGGCTGGTGGGAG 62.216 63.158 0.00 0.00 39.62 4.30
1052 1340 3.185203 AAAGCTGGGCTGGTGGGA 61.185 61.111 0.00 0.00 39.62 4.37
1084 1372 1.723870 GACAGATGGATTGGTGCGC 59.276 57.895 0.00 0.00 0.00 6.09
1121 1409 4.426313 GGAAACCGAGGCTGGGGG 62.426 72.222 20.28 7.38 0.00 5.40
1122 1410 4.426313 GGGAAACCGAGGCTGGGG 62.426 72.222 20.28 10.01 43.64 4.96
1145 1433 3.017323 CGATCTGGATTGCGTGGC 58.983 61.111 0.00 0.00 0.00 5.01
1152 1440 4.609018 CGGGCGGCGATCTGGATT 62.609 66.667 12.98 0.00 0.00 3.01
1172 1460 3.793144 CCTTCACTTGAGCGGCGC 61.793 66.667 26.86 26.86 0.00 6.53
1178 1466 1.676967 GCCTGGCCCTTCACTTGAG 60.677 63.158 7.66 0.00 0.00 3.02
1237 1525 1.962321 GAGCGAGGAAGGAAGGGACC 61.962 65.000 0.00 0.00 0.00 4.46
1238 1526 1.518302 GAGCGAGGAAGGAAGGGAC 59.482 63.158 0.00 0.00 0.00 4.46
1284 1589 5.219633 TGTGGATGATACATGTCGATAACG 58.780 41.667 0.00 0.00 41.26 3.18
1294 1599 3.323115 AGCGTCTCATGTGGATGATACAT 59.677 43.478 12.39 0.00 37.97 2.29
1296 1601 3.055591 CAGCGTCTCATGTGGATGATAC 58.944 50.000 12.39 0.00 37.97 2.24
1335 1640 3.908103 TGGATACTAATTCCTAGTGGGGC 59.092 47.826 0.00 0.00 41.20 5.80
1336 1641 6.704056 AATGGATACTAATTCCTAGTGGGG 57.296 41.667 0.00 0.00 41.20 4.96
1362 1667 7.725844 TCATGGCTGAAATCTACTATCAGTCTA 59.274 37.037 7.94 0.00 44.19 2.59
1368 1673 9.160496 CCTAAATCATGGCTGAAATCTACTATC 57.840 37.037 0.00 0.00 34.37 2.08
1369 1674 7.609532 GCCTAAATCATGGCTGAAATCTACTAT 59.390 37.037 0.00 0.00 45.26 2.12
1370 1675 6.936900 GCCTAAATCATGGCTGAAATCTACTA 59.063 38.462 0.00 0.00 45.26 1.82
1372 1681 6.006759 GCCTAAATCATGGCTGAAATCTAC 57.993 41.667 0.00 0.00 45.26 2.59
1407 1726 5.009510 TCGGCTGACAGATTGATTTTTGAAA 59.990 36.000 6.65 0.00 0.00 2.69
1408 1727 4.518590 TCGGCTGACAGATTGATTTTTGAA 59.481 37.500 6.65 0.00 0.00 2.69
1409 1728 4.071423 TCGGCTGACAGATTGATTTTTGA 58.929 39.130 6.65 0.00 0.00 2.69
1410 1729 4.161333 GTCGGCTGACAGATTGATTTTTG 58.839 43.478 21.02 0.00 44.82 2.44
1423 1751 1.925185 GAATTAAGACGGTCGGCTGAC 59.075 52.381 17.83 17.83 44.72 3.51
1424 1752 1.546923 TGAATTAAGACGGTCGGCTGA 59.453 47.619 0.98 0.00 31.22 4.26
1429 1757 1.659098 GTGGCTGAATTAAGACGGTCG 59.341 52.381 1.89 0.00 0.00 4.79
1451 1779 1.266989 GACAAACCTGGCTAGTTGTGC 59.733 52.381 10.24 0.83 0.00 4.57
1473 1801 7.975616 GCCAGTTGATTTGATAATAAGAAAGCA 59.024 33.333 0.00 0.00 0.00 3.91
1502 1833 5.185454 TGTCATGTGAAGTGAACAAAGAGT 58.815 37.500 0.00 0.00 0.00 3.24
1503 1834 5.739752 TGTCATGTGAAGTGAACAAAGAG 57.260 39.130 0.00 0.00 0.00 2.85
1504 1835 6.507958 TTTGTCATGTGAAGTGAACAAAGA 57.492 33.333 0.00 0.00 30.58 2.52
1507 1838 6.545666 AGGTATTTGTCATGTGAAGTGAACAA 59.454 34.615 0.00 0.00 0.00 2.83
1519 1850 5.882557 AGGAAAGTAGCAGGTATTTGTCATG 59.117 40.000 0.00 0.00 0.00 3.07
1531 1862 5.702670 TGATCTGAACAAAGGAAAGTAGCAG 59.297 40.000 0.00 0.00 0.00 4.24
1533 1864 5.703130 AGTGATCTGAACAAAGGAAAGTAGC 59.297 40.000 0.00 0.00 0.00 3.58
1539 1875 4.067896 GAGCAGTGATCTGAACAAAGGAA 58.932 43.478 0.00 0.00 43.76 3.36
1540 1876 3.326006 AGAGCAGTGATCTGAACAAAGGA 59.674 43.478 10.76 0.00 43.76 3.36
1541 1877 3.672808 AGAGCAGTGATCTGAACAAAGG 58.327 45.455 10.76 0.00 43.76 3.11
1554 1897 1.036707 GGGCCTAGAGTAGAGCAGTG 58.963 60.000 0.84 0.00 0.00 3.66
1585 1928 3.829886 TTTTTAGAATCGCTGGTGCTG 57.170 42.857 0.00 0.00 36.97 4.41
1586 1929 4.009675 TCATTTTTAGAATCGCTGGTGCT 58.990 39.130 0.00 0.00 36.97 4.40
1587 1930 4.355543 TCATTTTTAGAATCGCTGGTGC 57.644 40.909 0.00 0.00 0.00 5.01
1588 1931 5.698832 TGTTCATTTTTAGAATCGCTGGTG 58.301 37.500 0.00 0.00 0.00 4.17
1589 1932 5.619981 GCTGTTCATTTTTAGAATCGCTGGT 60.620 40.000 0.00 0.00 0.00 4.00
1590 1933 4.795278 GCTGTTCATTTTTAGAATCGCTGG 59.205 41.667 0.00 0.00 0.00 4.85
1625 1979 2.761208 AGCCTCAGATTACTAACGTGCT 59.239 45.455 0.00 0.00 0.00 4.40
1629 1983 6.238211 CCATTGAAAGCCTCAGATTACTAACG 60.238 42.308 0.00 0.00 34.81 3.18
1631 1985 6.957631 TCCATTGAAAGCCTCAGATTACTAA 58.042 36.000 0.00 0.00 34.81 2.24
1661 2015 8.548721 CAAAAAGGAAGCGTGGTAATATAGTAG 58.451 37.037 0.00 0.00 0.00 2.57
1662 2016 7.011669 GCAAAAAGGAAGCGTGGTAATATAGTA 59.988 37.037 0.00 0.00 0.00 1.82
1668 2022 2.625790 TGCAAAAAGGAAGCGTGGTAAT 59.374 40.909 0.00 0.00 0.00 1.89
1675 2029 1.919918 TTGTGTGCAAAAAGGAAGCG 58.080 45.000 0.00 0.00 0.00 4.68
1691 2046 8.611051 AGTAGAGGTATTCCACTATCTTTTGT 57.389 34.615 0.00 0.00 38.68 2.83
1692 2047 8.696374 TGAGTAGAGGTATTCCACTATCTTTTG 58.304 37.037 0.00 0.00 38.68 2.44
1693 2048 8.840200 TGAGTAGAGGTATTCCACTATCTTTT 57.160 34.615 0.00 0.00 38.68 2.27
1694 2049 8.697292 GTTGAGTAGAGGTATTCCACTATCTTT 58.303 37.037 0.00 0.00 38.68 2.52
1695 2050 8.062536 AGTTGAGTAGAGGTATTCCACTATCTT 58.937 37.037 0.00 0.00 38.68 2.40
1696 2051 7.504238 CAGTTGAGTAGAGGTATTCCACTATCT 59.496 40.741 0.00 0.00 38.68 1.98
1697 2052 7.653647 CAGTTGAGTAGAGGTATTCCACTATC 58.346 42.308 0.00 0.58 38.68 2.08
1698 2053 6.041069 GCAGTTGAGTAGAGGTATTCCACTAT 59.959 42.308 0.00 0.00 38.68 2.12
1699 2054 5.360144 GCAGTTGAGTAGAGGTATTCCACTA 59.640 44.000 0.00 0.00 36.19 2.74
1700 2055 4.160626 GCAGTTGAGTAGAGGTATTCCACT 59.839 45.833 0.00 0.00 38.21 4.00
1701 2056 4.434520 GCAGTTGAGTAGAGGTATTCCAC 58.565 47.826 0.00 0.00 35.89 4.02
1702 2057 3.451178 GGCAGTTGAGTAGAGGTATTCCA 59.549 47.826 0.00 0.00 35.89 3.53
1703 2058 3.707102 AGGCAGTTGAGTAGAGGTATTCC 59.293 47.826 0.00 0.00 0.00 3.01
1704 2059 4.402793 TCAGGCAGTTGAGTAGAGGTATTC 59.597 45.833 0.00 0.00 0.00 1.75
1705 2060 4.353777 TCAGGCAGTTGAGTAGAGGTATT 58.646 43.478 0.00 0.00 0.00 1.89
1706 2061 3.982516 TCAGGCAGTTGAGTAGAGGTAT 58.017 45.455 0.00 0.00 0.00 2.73
1707 2062 3.451402 TCAGGCAGTTGAGTAGAGGTA 57.549 47.619 0.00 0.00 0.00 3.08
1712 2084 2.983229 AGCAATCAGGCAGTTGAGTAG 58.017 47.619 0.00 0.00 35.83 2.57
1737 2109 5.235831 GTGGTAAGACAAGTTGGTACTGAAC 59.764 44.000 7.96 0.68 34.01 3.18
1749 2121 2.221055 GTGCAACGAGTGGTAAGACAAG 59.779 50.000 0.00 0.00 0.00 3.16
1828 2234 9.880157 TGGTTTGCTAAATACTACTACCTTTAG 57.120 33.333 0.00 0.00 35.34 1.85
1829 2235 9.657419 GTGGTTTGCTAAATACTACTACCTTTA 57.343 33.333 0.00 0.00 0.00 1.85
1830 2236 8.380867 AGTGGTTTGCTAAATACTACTACCTTT 58.619 33.333 0.00 0.00 32.73 3.11
1831 2237 7.914859 AGTGGTTTGCTAAATACTACTACCTT 58.085 34.615 0.00 0.00 32.73 3.50
1832 2238 7.492077 AGTGGTTTGCTAAATACTACTACCT 57.508 36.000 0.00 0.00 32.73 3.08
1833 2239 7.009907 CGAAGTGGTTTGCTAAATACTACTACC 59.990 40.741 0.00 0.00 33.25 3.18
1834 2240 7.463780 GCGAAGTGGTTTGCTAAATACTACTAC 60.464 40.741 0.00 0.00 39.69 2.73
1837 2243 5.557388 GCGAAGTGGTTTGCTAAATACTAC 58.443 41.667 0.00 0.00 39.69 2.73
1870 2276 8.508800 AGCGTAGAATTAAGAATCATAAGACG 57.491 34.615 0.00 0.00 0.00 4.18
1922 2471 2.605366 GACGCAGGTGCTAGAAGAAATC 59.395 50.000 0.00 0.00 39.32 2.17
1966 2563 3.223435 CTGCGGGAAGACCTCTATTCTA 58.777 50.000 0.00 0.00 36.97 2.10
2002 2620 1.002134 AGCGTCCATGGGGTCTTTG 60.002 57.895 13.02 0.00 34.93 2.77
2026 2652 2.300437 GCTCTTACTTGTGGACAGACCT 59.700 50.000 0.00 0.00 39.86 3.85
2099 2740 7.479150 CATTAAAGAAGGAGGCTGAGAATTTC 58.521 38.462 0.00 0.00 0.00 2.17
2100 2741 6.127507 GCATTAAAGAAGGAGGCTGAGAATTT 60.128 38.462 0.00 0.00 0.00 1.82
2109 2751 2.027385 CCCAGCATTAAAGAAGGAGGC 58.973 52.381 0.00 0.00 0.00 4.70
2152 2799 1.667236 CGGACTGCTCATATTGGCAA 58.333 50.000 0.68 0.68 38.02 4.52
2155 2802 0.530650 ACGCGGACTGCTCATATTGG 60.531 55.000 12.47 0.00 43.27 3.16
2159 2806 2.030551 CCTACGCGGACTGCTCATA 58.969 57.895 12.47 0.00 43.27 2.15
2160 2807 2.808315 CCTACGCGGACTGCTCAT 59.192 61.111 12.47 0.00 43.27 2.90
2208 3042 3.043713 TTGCAGAAGCGACGCAGG 61.044 61.111 23.70 9.05 46.23 4.85
2332 3169 8.721478 CATAGCAACGGAAAGTATTAGCATTAT 58.279 33.333 0.00 0.00 0.00 1.28
2342 3202 6.869695 TGATAAGTCATAGCAACGGAAAGTA 58.130 36.000 0.00 0.00 0.00 2.24
2344 3204 6.042777 TCTGATAAGTCATAGCAACGGAAAG 58.957 40.000 0.00 0.00 32.98 2.62
2427 3287 3.518303 GGGCTTTTAACTGGGACTCTCTA 59.482 47.826 0.00 0.00 0.00 2.43
2430 3290 1.003233 CGGGCTTTTAACTGGGACTCT 59.997 52.381 0.00 0.00 0.00 3.24
2440 3300 3.436577 TTCACCATACCGGGCTTTTAA 57.563 42.857 6.32 0.00 40.22 1.52
2456 3316 5.985530 GCTAAATATTGAAGGGGCATTTCAC 59.014 40.000 2.84 0.00 34.50 3.18
2461 3321 4.411013 GAGGCTAAATATTGAAGGGGCAT 58.589 43.478 0.00 0.00 0.00 4.40
2463 3323 2.814336 CGAGGCTAAATATTGAAGGGGC 59.186 50.000 0.00 0.00 0.00 5.80
2484 3344 3.066203 AGGTGAAAATCCACACAAACGTC 59.934 43.478 0.00 0.00 38.74 4.34
2591 3454 2.716504 CGCATATCTCAAGACTTCGTCG 59.283 50.000 0.00 0.00 37.67 5.12
2612 3475 1.449778 GAGGTACCCAGAAAGGCGC 60.450 63.158 8.74 0.00 35.39 6.53
2916 3792 0.957362 GGCAAGAAAGAGCAGCAGTT 59.043 50.000 0.00 0.00 0.00 3.16
2920 3796 0.458025 GCATGGCAAGAAAGAGCAGC 60.458 55.000 0.00 0.00 0.00 5.25
3010 3886 3.469008 ACACGTCACCAAGAGAAATGA 57.531 42.857 0.00 0.00 0.00 2.57
3068 3944 0.381428 GCACGACAAAGAACACGACG 60.381 55.000 0.00 0.00 0.00 5.12
3084 3960 2.545946 GACTCAAGTTCAGGTTCAGCAC 59.454 50.000 0.00 0.00 0.00 4.40
3086 3962 2.805099 CAGACTCAAGTTCAGGTTCAGC 59.195 50.000 0.00 0.00 0.00 4.26
3109 4120 1.293924 CATCGCAGAGTTCACCATCC 58.706 55.000 0.00 0.00 43.63 3.51
3187 4200 0.823356 GCACAAAGTTGGGGAGCTGA 60.823 55.000 0.00 0.00 30.51 4.26
3283 4296 2.017782 GTCTCGCTCACCTGTATCTCA 58.982 52.381 0.00 0.00 0.00 3.27
3311 4324 2.238898 AGATCCAAGTTTCGGTTAGGGG 59.761 50.000 0.00 0.00 0.00 4.79
3327 4349 9.727859 GGTAGATAAATTCCCTTCTTAAGATCC 57.272 37.037 5.89 0.00 0.00 3.36
3334 4356 6.614657 CATGGGGTAGATAAATTCCCTTCTT 58.385 40.000 0.00 0.00 39.80 2.52
3349 4371 0.249120 TCACTTCGTGCATGGGGTAG 59.751 55.000 5.98 1.83 32.98 3.18
3352 4374 2.260844 ATATCACTTCGTGCATGGGG 57.739 50.000 5.98 1.89 32.98 4.96
3353 4375 3.067106 GGTATATCACTTCGTGCATGGG 58.933 50.000 5.98 2.26 32.98 4.00
3363 4404 9.528018 CAACAACAAAAACTTGGTATATCACTT 57.472 29.630 0.00 0.00 0.00 3.16
3365 4406 8.751335 CACAACAACAAAAACTTGGTATATCAC 58.249 33.333 0.00 0.00 0.00 3.06
3367 4408 8.751335 CACACAACAACAAAAACTTGGTATATC 58.249 33.333 0.00 0.00 0.00 1.63
3371 4412 5.221461 ACCACACAACAACAAAAACTTGGTA 60.221 36.000 0.00 0.00 31.83 3.25
3372 4413 4.061596 CCACACAACAACAAAAACTTGGT 58.938 39.130 0.00 0.00 0.00 3.67
3373 4414 4.061596 ACCACACAACAACAAAAACTTGG 58.938 39.130 0.00 0.00 0.00 3.61
3388 4429 1.508545 CACGCCACAAAACCACACA 59.491 52.632 0.00 0.00 0.00 3.72
3392 4433 2.755876 TGCCACGCCACAAAACCA 60.756 55.556 0.00 0.00 0.00 3.67
3393 4434 2.027460 CTGCCACGCCACAAAACC 59.973 61.111 0.00 0.00 0.00 3.27
3403 4444 2.047274 ACGAATCCACCTGCCACG 60.047 61.111 0.00 0.00 0.00 4.94
3464 4505 3.939837 CTTGCTCTTCGCCTCGGCA 62.940 63.158 8.87 0.00 42.06 5.69
3502 4543 2.503331 TCCTGCACACACTTACATTGG 58.497 47.619 0.00 0.00 0.00 3.16
3507 4548 3.315191 ACATGTTTCCTGCACACACTTAC 59.685 43.478 0.00 0.00 0.00 2.34
3610 4671 8.650143 TTATATACATACATCTGCACTCTCCA 57.350 34.615 0.00 0.00 0.00 3.86
3641 4704 0.034059 ACAGCTGCTTACACGCTTCT 59.966 50.000 15.27 0.00 30.84 2.85
3663 4726 0.099082 TGCGAAAACAAACCCGTCAC 59.901 50.000 0.00 0.00 0.00 3.67
3668 4731 1.611491 TCATCCTGCGAAAACAAACCC 59.389 47.619 0.00 0.00 0.00 4.11
3671 4734 6.016693 TCTGTTAATCATCCTGCGAAAACAAA 60.017 34.615 0.00 0.00 0.00 2.83
3674 4737 5.545658 TCTGTTAATCATCCTGCGAAAAC 57.454 39.130 0.00 0.00 0.00 2.43
3678 4741 4.100035 ACAGATCTGTTAATCATCCTGCGA 59.900 41.667 22.89 0.00 41.83 5.10
3679 4742 4.375272 ACAGATCTGTTAATCATCCTGCG 58.625 43.478 22.89 0.00 41.83 5.18
3695 4758 5.066505 CCAGCACCCACTAAATTAACAGATC 59.933 44.000 0.00 0.00 0.00 2.75
3696 4759 4.949856 CCAGCACCCACTAAATTAACAGAT 59.050 41.667 0.00 0.00 0.00 2.90
3697 4760 4.331968 CCAGCACCCACTAAATTAACAGA 58.668 43.478 0.00 0.00 0.00 3.41
3698 4761 3.443681 CCCAGCACCCACTAAATTAACAG 59.556 47.826 0.00 0.00 0.00 3.16
3701 4764 2.225142 TGCCCAGCACCCACTAAATTAA 60.225 45.455 0.00 0.00 31.71 1.40
3703 4766 0.114168 TGCCCAGCACCCACTAAATT 59.886 50.000 0.00 0.00 31.71 1.82
3704 4767 0.323725 CTGCCCAGCACCCACTAAAT 60.324 55.000 0.00 0.00 33.79 1.40
3705 4768 1.074775 CTGCCCAGCACCCACTAAA 59.925 57.895 0.00 0.00 33.79 1.85
3708 4771 2.541907 ATTCTGCCCAGCACCCACT 61.542 57.895 0.00 0.00 33.79 4.00
3709 4772 2.036256 ATTCTGCCCAGCACCCAC 59.964 61.111 0.00 0.00 33.79 4.61
3711 4774 0.685458 ATTCATTCTGCCCAGCACCC 60.685 55.000 0.00 0.00 33.79 4.61
3713 4776 3.019564 ACTTATTCATTCTGCCCAGCAC 58.980 45.455 0.00 0.00 33.79 4.40
3743 4813 2.553086 CAGCAACAACAGGCAAAACAT 58.447 42.857 0.00 0.00 0.00 2.71
3752 4822 7.359431 CCACTAAATTAAATGCAGCAACAACAG 60.359 37.037 0.00 0.00 0.00 3.16
3762 4832 5.184864 CACCTCACCCACTAAATTAAATGCA 59.815 40.000 0.00 0.00 0.00 3.96
3766 4836 5.010213 GCAACACCTCACCCACTAAATTAAA 59.990 40.000 0.00 0.00 0.00 1.52
3768 4838 4.076394 GCAACACCTCACCCACTAAATTA 58.924 43.478 0.00 0.00 0.00 1.40
3787 4862 0.166597 CTTGCAATCTTCGCTCGCAA 59.833 50.000 0.00 0.00 40.08 4.85
3896 4976 3.056832 AGAGAAACTCCTTCCACCCTTT 58.943 45.455 0.00 0.00 34.21 3.11
3951 5031 5.132502 TGGATTCAGTTTCACTTCACACAT 58.867 37.500 0.00 0.00 0.00 3.21
3989 5069 9.532494 CCCCCATCATCTAAAATAAATACATCA 57.468 33.333 0.00 0.00 0.00 3.07
4043 5125 2.597217 CCCAACTTCAAGCGCCCA 60.597 61.111 2.29 0.00 0.00 5.36
4054 5136 0.704664 GGGATCAAACCTCCCCAACT 59.295 55.000 0.00 0.00 45.80 3.16
4127 5226 4.959596 GAGCCGCGGAGATGAGCC 62.960 72.222 33.48 8.41 0.00 4.70
4128 5227 3.438017 AAGAGCCGCGGAGATGAGC 62.438 63.158 33.48 11.84 0.00 4.26
4129 5228 1.299773 GAAGAGCCGCGGAGATGAG 60.300 63.158 33.48 0.00 0.00 2.90
4130 5229 1.729470 GAGAAGAGCCGCGGAGATGA 61.729 60.000 33.48 0.00 0.00 2.92
4131 5230 1.299773 GAGAAGAGCCGCGGAGATG 60.300 63.158 33.48 0.95 0.00 2.90
4132 5231 2.494530 GGAGAAGAGCCGCGGAGAT 61.495 63.158 33.48 14.44 0.00 2.75
4133 5232 3.141488 GGAGAAGAGCCGCGGAGA 61.141 66.667 33.48 0.00 0.00 3.71
4134 5233 4.560856 CGGAGAAGAGCCGCGGAG 62.561 72.222 33.48 2.86 42.55 4.63
4154 5253 4.247380 GCTGCTAGGAGCCGCCAT 62.247 66.667 24.59 0.00 44.22 4.40
4172 5271 1.530771 GCTGCCACCCATGAGAGAT 59.469 57.895 0.00 0.00 0.00 2.75
4203 5302 3.733960 GAACCAAAGCCCGCCGAC 61.734 66.667 0.00 0.00 0.00 4.79
4214 5313 0.110486 GGGCTGGAGTCAAGAACCAA 59.890 55.000 0.00 0.00 33.14 3.67
4215 5314 1.059584 TGGGCTGGAGTCAAGAACCA 61.060 55.000 7.17 7.17 0.00 3.67
4225 5324 0.471617 CCTCATAGGTTGGGCTGGAG 59.528 60.000 0.00 0.00 0.00 3.86
4246 5345 5.006746 CACACTTCTCACTTTCACAACTACC 59.993 44.000 0.00 0.00 0.00 3.18
4282 5381 9.444600 GTAAGTTTAACCTCATCATTTAGGTCA 57.555 33.333 0.00 0.00 45.51 4.02
4308 5407 4.194640 CACTCCAACATCATACCTTCCAG 58.805 47.826 0.00 0.00 0.00 3.86
4338 5437 2.599082 GGCGTACTCTTCAATGAAGACG 59.401 50.000 20.61 21.96 42.78 4.18
4343 5442 4.202121 GGTGATAGGCGTACTCTTCAATGA 60.202 45.833 0.00 0.00 0.00 2.57
4344 5443 4.051922 GGTGATAGGCGTACTCTTCAATG 58.948 47.826 0.00 0.00 0.00 2.82
4345 5444 3.961408 AGGTGATAGGCGTACTCTTCAAT 59.039 43.478 0.00 0.00 0.00 2.57
4356 5455 1.334869 GCAATTCCAAGGTGATAGGCG 59.665 52.381 0.00 0.00 0.00 5.52
4368 5467 4.586421 TGTACACTTTCCAATGCAATTCCA 59.414 37.500 0.00 0.00 31.22 3.53
4384 5483 6.852420 TGCTCTACTTTATCCTTGTACACT 57.148 37.500 0.00 0.00 0.00 3.55
4395 5494 5.419542 TGTCTTGCGATTGCTCTACTTTAT 58.580 37.500 6.47 0.00 43.34 1.40
4423 5522 3.934579 CCTTGGTGGCAAATAATTCAAGC 59.065 43.478 0.00 0.00 31.64 4.01
4450 5549 9.847224 TCCAAGTCAATTTATAATAGAGGAACC 57.153 33.333 0.00 0.00 0.00 3.62
4452 5551 9.847224 GGTCCAAGTCAATTTATAATAGAGGAA 57.153 33.333 0.00 0.00 0.00 3.36
4459 5558 5.197451 TGCCGGTCCAAGTCAATTTATAAT 58.803 37.500 1.90 0.00 0.00 1.28
4460 5559 4.590918 TGCCGGTCCAAGTCAATTTATAA 58.409 39.130 1.90 0.00 0.00 0.98
4463 5562 2.570415 TGCCGGTCCAAGTCAATTTA 57.430 45.000 1.90 0.00 0.00 1.40
4475 5574 2.514824 GGAGAAGGCATGCCGGTC 60.515 66.667 30.50 28.57 41.95 4.79
4488 5587 6.215431 CCTACCATTATCATGTATTGGGGAGA 59.785 42.308 14.91 0.00 0.00 3.71
4491 5590 5.015178 ACCCTACCATTATCATGTATTGGGG 59.985 44.000 14.91 0.00 35.56 4.96
4503 5602 5.670361 ACATACACCTTGACCCTACCATTAT 59.330 40.000 0.00 0.00 0.00 1.28
4504 5603 5.034200 ACATACACCTTGACCCTACCATTA 58.966 41.667 0.00 0.00 0.00 1.90
4505 5604 3.850173 ACATACACCTTGACCCTACCATT 59.150 43.478 0.00 0.00 0.00 3.16
4587 5686 7.344612 TCTCTTGGTCTTGAATTACTATGGCTA 59.655 37.037 0.00 0.00 0.00 3.93
4608 5707 6.062749 ACATGAGCAATAGCATGAATCTCTT 58.937 36.000 0.00 0.00 43.43 2.85
4610 5709 5.943706 ACATGAGCAATAGCATGAATCTC 57.056 39.130 0.00 0.00 43.43 2.75
4624 5723 3.558418 CGTCATCATCATCAACATGAGCA 59.442 43.478 0.00 0.00 42.53 4.26
4645 5759 3.459232 TCTTCCACATAAGCATCCTCG 57.541 47.619 0.00 0.00 0.00 4.63
4648 5762 5.371526 TCATCTTCTTCCACATAAGCATCC 58.628 41.667 0.00 0.00 0.00 3.51
4669 5783 2.446435 TGGACGAGTGAGTCATCATCA 58.554 47.619 0.00 0.00 42.62 3.07
4672 5786 2.825532 TCATTGGACGAGTGAGTCATCA 59.174 45.455 0.00 0.00 42.62 3.07
4673 5787 3.510388 TCATTGGACGAGTGAGTCATC 57.490 47.619 0.00 0.00 42.62 2.92
4677 6894 3.192844 ACGTTATCATTGGACGAGTGAGT 59.807 43.478 12.63 0.00 39.85 3.41
4682 6899 3.678072 ACAACACGTTATCATTGGACGAG 59.322 43.478 12.63 8.64 39.85 4.18
4704 6921 0.109723 ACTAAAGCAAAGGCCACCGA 59.890 50.000 5.01 0.00 42.56 4.69
4724 6941 1.226239 GTCGTCGTACTCGGAAGGC 60.226 63.158 7.30 0.00 37.69 4.35
4734 6951 2.555325 ACCACTCTCAATTGTCGTCGTA 59.445 45.455 5.13 0.00 0.00 3.43
4736 6953 2.065993 ACCACTCTCAATTGTCGTCG 57.934 50.000 5.13 0.00 0.00 5.12
4748 6965 0.033796 CATGCCCCATGAACCACTCT 60.034 55.000 0.00 0.00 43.81 3.24
4790 7007 6.381133 AGTTCGATATGATGCATACCTCCATA 59.619 38.462 0.00 3.18 0.00 2.74
4792 7009 4.528206 AGTTCGATATGATGCATACCTCCA 59.472 41.667 0.00 0.00 0.00 3.86
4812 7029 0.251922 AGAATGCCATGGTGCCAGTT 60.252 50.000 14.67 0.00 0.00 3.16
4815 7032 0.251698 TTGAGAATGCCATGGTGCCA 60.252 50.000 14.67 2.94 0.00 4.92
4856 7073 1.185618 GGTGAAGTTTTGGGAGGCCC 61.186 60.000 0.00 0.00 45.71 5.80
4859 7076 1.328279 GGTGGTGAAGTTTTGGGAGG 58.672 55.000 0.00 0.00 0.00 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.