Multiple sequence alignment - TraesCS1D01G448000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G448000 chr1D 100.000 2532 0 0 1 2532 490432190 490434721 0.000000e+00 4676.0
1 TraesCS1D01G448000 chr3D 97.432 1986 39 5 547 2532 45526944 45528917 0.000000e+00 3374.0
2 TraesCS1D01G448000 chr3D 97.577 1692 34 4 847 2532 537296654 537298344 0.000000e+00 2891.0
3 TraesCS1D01G448000 chr6D 96.898 1999 45 7 548 2532 17067057 17069052 0.000000e+00 3332.0
4 TraesCS1D01G448000 chr6D 96.798 1999 44 7 549 2531 100358866 100360860 0.000000e+00 3319.0
5 TraesCS1D01G448000 chr2D 96.810 2006 41 5 549 2532 645194647 645196651 0.000000e+00 3328.0
6 TraesCS1D01G448000 chr1A 96.724 1984 42 5 549 2511 567959234 567957253 0.000000e+00 3282.0
7 TraesCS1D01G448000 chr7A 96.187 1993 55 11 551 2531 70819345 70821328 0.000000e+00 3240.0
8 TraesCS1D01G448000 chr7D 98.097 1629 23 4 910 2532 31039544 31037918 0.000000e+00 2830.0
9 TraesCS1D01G448000 chr7D 93.192 426 20 5 549 974 623617865 623618281 3.580000e-173 617.0
10 TraesCS1D01G448000 chr2A 96.714 1704 45 5 832 2530 175418988 175420685 0.000000e+00 2826.0
11 TraesCS1D01G448000 chr2A 95.730 281 12 0 548 828 111916591 111916311 1.070000e-123 453.0
12 TraesCS1D01G448000 chr2A 96.029 277 11 0 549 825 12591391 12591667 3.840000e-123 451.0
13 TraesCS1D01G448000 chr2A 93.972 282 17 0 548 829 719256061 719256342 6.470000e-116 427.0
14 TraesCS1D01G448000 chr2A 97.095 241 7 0 549 789 605197290 605197050 8.430000e-110 407.0
15 TraesCS1D01G448000 chr7B 92.000 325 23 2 549 870 732787503 732787827 1.070000e-123 453.0
16 TraesCS1D01G448000 chr4D 97.297 37 1 0 161 197 177568535 177568571 2.100000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G448000 chr1D 490432190 490434721 2531 False 4676 4676 100.000 1 2532 1 chr1D.!!$F1 2531
1 TraesCS1D01G448000 chr3D 45526944 45528917 1973 False 3374 3374 97.432 547 2532 1 chr3D.!!$F1 1985
2 TraesCS1D01G448000 chr3D 537296654 537298344 1690 False 2891 2891 97.577 847 2532 1 chr3D.!!$F2 1685
3 TraesCS1D01G448000 chr6D 17067057 17069052 1995 False 3332 3332 96.898 548 2532 1 chr6D.!!$F1 1984
4 TraesCS1D01G448000 chr6D 100358866 100360860 1994 False 3319 3319 96.798 549 2531 1 chr6D.!!$F2 1982
5 TraesCS1D01G448000 chr2D 645194647 645196651 2004 False 3328 3328 96.810 549 2532 1 chr2D.!!$F1 1983
6 TraesCS1D01G448000 chr1A 567957253 567959234 1981 True 3282 3282 96.724 549 2511 1 chr1A.!!$R1 1962
7 TraesCS1D01G448000 chr7A 70819345 70821328 1983 False 3240 3240 96.187 551 2531 1 chr7A.!!$F1 1980
8 TraesCS1D01G448000 chr7D 31037918 31039544 1626 True 2830 2830 98.097 910 2532 1 chr7D.!!$R1 1622
9 TraesCS1D01G448000 chr2A 175418988 175420685 1697 False 2826 2826 96.714 832 2530 1 chr2A.!!$F2 1698

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
396 397 0.032912 ACATCATGCCTGCATTCCCA 60.033 50.0 0.97 0.0 33.9 4.37 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2081 2123 1.6868 GAGCCCCATGCAAACCCAT 60.687 57.895 0.0 0.0 44.83 4.0 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 9.866798 TGAATATTGTTATTTTGCTATTGTGCA 57.133 25.926 0.00 0.00 41.65 4.57
38 39 8.464770 TTGTTATTTTGCTATTGTGCAGATTC 57.535 30.769 0.00 0.00 44.27 2.52
39 40 7.829725 TGTTATTTTGCTATTGTGCAGATTCT 58.170 30.769 0.00 0.00 44.27 2.40
40 41 7.756272 TGTTATTTTGCTATTGTGCAGATTCTG 59.244 33.333 9.40 9.40 44.27 3.02
54 55 5.998454 CAGATTCTGCTCCGAAACATTAT 57.002 39.130 0.00 0.00 0.00 1.28
55 56 5.745514 CAGATTCTGCTCCGAAACATTATG 58.254 41.667 0.00 0.00 0.00 1.90
56 57 5.525012 CAGATTCTGCTCCGAAACATTATGA 59.475 40.000 0.00 0.00 0.00 2.15
57 58 5.757320 AGATTCTGCTCCGAAACATTATGAG 59.243 40.000 0.00 0.00 0.00 2.90
58 59 4.736126 TCTGCTCCGAAACATTATGAGA 57.264 40.909 0.00 0.00 0.00 3.27
59 60 4.686972 TCTGCTCCGAAACATTATGAGAG 58.313 43.478 0.00 0.00 0.00 3.20
60 61 4.402474 TCTGCTCCGAAACATTATGAGAGA 59.598 41.667 0.00 0.00 0.00 3.10
61 62 4.686972 TGCTCCGAAACATTATGAGAGAG 58.313 43.478 0.00 0.00 0.00 3.20
62 63 3.492756 GCTCCGAAACATTATGAGAGAGC 59.507 47.826 0.00 5.61 37.64 4.09
63 64 4.686972 CTCCGAAACATTATGAGAGAGCA 58.313 43.478 0.00 0.00 0.00 4.26
64 65 5.084818 TCCGAAACATTATGAGAGAGCAA 57.915 39.130 0.00 0.00 0.00 3.91
65 66 4.870426 TCCGAAACATTATGAGAGAGCAAC 59.130 41.667 0.00 0.00 0.00 4.17
66 67 4.631377 CCGAAACATTATGAGAGAGCAACA 59.369 41.667 0.00 0.00 0.00 3.33
67 68 5.122239 CCGAAACATTATGAGAGAGCAACAA 59.878 40.000 0.00 0.00 0.00 2.83
68 69 6.246449 CGAAACATTATGAGAGAGCAACAAG 58.754 40.000 0.00 0.00 0.00 3.16
69 70 5.557891 AACATTATGAGAGAGCAACAAGC 57.442 39.130 0.00 0.00 46.19 4.01
85 86 4.605640 ACAAGCTTGTTATGCCATGTTT 57.394 36.364 26.36 0.00 38.47 2.83
86 87 4.559153 ACAAGCTTGTTATGCCATGTTTC 58.441 39.130 26.36 0.00 38.47 2.78
87 88 4.281688 ACAAGCTTGTTATGCCATGTTTCT 59.718 37.500 26.36 0.00 38.47 2.52
88 89 5.221501 ACAAGCTTGTTATGCCATGTTTCTT 60.222 36.000 26.36 0.00 38.47 2.52
89 90 4.813027 AGCTTGTTATGCCATGTTTCTTG 58.187 39.130 0.00 0.00 0.00 3.02
90 91 3.368843 GCTTGTTATGCCATGTTTCTTGC 59.631 43.478 0.00 0.00 0.00 4.01
91 92 4.558178 CTTGTTATGCCATGTTTCTTGCA 58.442 39.130 0.00 0.00 38.23 4.08
92 93 4.804868 TGTTATGCCATGTTTCTTGCAT 57.195 36.364 9.37 9.37 45.67 3.96
93 94 5.149973 TGTTATGCCATGTTTCTTGCATT 57.850 34.783 9.64 0.00 41.40 3.56
94 95 5.549347 TGTTATGCCATGTTTCTTGCATTT 58.451 33.333 9.64 0.00 41.40 2.32
95 96 5.408909 TGTTATGCCATGTTTCTTGCATTTG 59.591 36.000 9.64 0.00 41.40 2.32
96 97 2.768698 TGCCATGTTTCTTGCATTTGG 58.231 42.857 0.00 0.00 0.00 3.28
97 98 2.367894 TGCCATGTTTCTTGCATTTGGA 59.632 40.909 0.00 0.00 0.00 3.53
98 99 2.738314 GCCATGTTTCTTGCATTTGGAC 59.262 45.455 0.00 0.00 0.00 4.02
99 100 3.328505 CCATGTTTCTTGCATTTGGACC 58.671 45.455 0.00 0.00 0.00 4.46
100 101 3.007182 CCATGTTTCTTGCATTTGGACCT 59.993 43.478 0.00 0.00 0.00 3.85
101 102 4.240096 CATGTTTCTTGCATTTGGACCTC 58.760 43.478 0.00 0.00 0.00 3.85
102 103 3.295093 TGTTTCTTGCATTTGGACCTCA 58.705 40.909 0.00 0.00 0.00 3.86
103 104 3.896888 TGTTTCTTGCATTTGGACCTCAT 59.103 39.130 0.00 0.00 0.00 2.90
104 105 4.022068 TGTTTCTTGCATTTGGACCTCATC 60.022 41.667 0.00 0.00 0.00 2.92
105 106 2.358957 TCTTGCATTTGGACCTCATCG 58.641 47.619 0.00 0.00 0.00 3.84
106 107 1.402968 CTTGCATTTGGACCTCATCGG 59.597 52.381 0.00 0.00 39.35 4.18
107 108 1.031571 TGCATTTGGACCTCATCGGC 61.032 55.000 0.00 0.00 35.61 5.54
108 109 1.031571 GCATTTGGACCTCATCGGCA 61.032 55.000 0.00 0.00 35.61 5.69
109 110 1.462616 CATTTGGACCTCATCGGCAA 58.537 50.000 0.00 0.00 35.61 4.52
110 111 2.026641 CATTTGGACCTCATCGGCAAT 58.973 47.619 0.00 0.00 35.61 3.56
111 112 2.214376 TTTGGACCTCATCGGCAATT 57.786 45.000 0.00 0.00 35.61 2.32
112 113 1.462616 TTGGACCTCATCGGCAATTG 58.537 50.000 0.00 0.00 35.61 2.32
113 114 0.394216 TGGACCTCATCGGCAATTGG 60.394 55.000 7.72 0.00 35.61 3.16
114 115 0.394352 GGACCTCATCGGCAATTGGT 60.394 55.000 7.72 0.00 35.61 3.67
115 116 1.017387 GACCTCATCGGCAATTGGTC 58.983 55.000 7.72 0.00 37.42 4.02
116 117 0.620556 ACCTCATCGGCAATTGGTCT 59.379 50.000 7.72 0.00 35.61 3.85
117 118 1.303309 CCTCATCGGCAATTGGTCTC 58.697 55.000 7.72 0.00 0.00 3.36
118 119 1.134280 CCTCATCGGCAATTGGTCTCT 60.134 52.381 7.72 0.00 0.00 3.10
119 120 2.636830 CTCATCGGCAATTGGTCTCTT 58.363 47.619 7.72 0.00 0.00 2.85
120 121 2.353889 CTCATCGGCAATTGGTCTCTTG 59.646 50.000 7.72 0.00 0.00 3.02
121 122 2.027285 TCATCGGCAATTGGTCTCTTGA 60.027 45.455 7.72 0.00 0.00 3.02
122 123 2.559698 TCGGCAATTGGTCTCTTGAA 57.440 45.000 7.72 0.00 0.00 2.69
123 124 2.857483 TCGGCAATTGGTCTCTTGAAA 58.143 42.857 7.72 0.00 0.00 2.69
124 125 2.552315 TCGGCAATTGGTCTCTTGAAAC 59.448 45.455 7.72 0.00 0.00 2.78
125 126 2.554032 CGGCAATTGGTCTCTTGAAACT 59.446 45.455 7.72 0.00 0.00 2.66
126 127 3.751175 CGGCAATTGGTCTCTTGAAACTA 59.249 43.478 7.72 0.00 0.00 2.24
127 128 4.215399 CGGCAATTGGTCTCTTGAAACTAA 59.785 41.667 7.72 0.00 0.00 2.24
128 129 5.278266 CGGCAATTGGTCTCTTGAAACTAAA 60.278 40.000 7.72 0.00 0.00 1.85
129 130 5.920840 GGCAATTGGTCTCTTGAAACTAAAC 59.079 40.000 7.72 0.00 0.00 2.01
130 131 6.460953 GGCAATTGGTCTCTTGAAACTAAACA 60.461 38.462 7.72 0.00 0.00 2.83
131 132 7.147976 GCAATTGGTCTCTTGAAACTAAACAT 58.852 34.615 7.72 0.00 0.00 2.71
132 133 7.653311 GCAATTGGTCTCTTGAAACTAAACATT 59.347 33.333 7.72 0.00 0.00 2.71
133 134 8.971321 CAATTGGTCTCTTGAAACTAAACATTG 58.029 33.333 0.00 0.00 0.00 2.82
134 135 7.873719 TTGGTCTCTTGAAACTAAACATTGA 57.126 32.000 0.00 0.00 0.00 2.57
135 136 7.259290 TGGTCTCTTGAAACTAAACATTGAC 57.741 36.000 0.00 0.00 0.00 3.18
136 137 6.018262 TGGTCTCTTGAAACTAAACATTGACG 60.018 38.462 0.00 0.00 0.00 4.35
137 138 5.846473 GTCTCTTGAAACTAAACATTGACGC 59.154 40.000 0.00 0.00 0.00 5.19
138 139 5.758296 TCTCTTGAAACTAAACATTGACGCT 59.242 36.000 0.00 0.00 0.00 5.07
139 140 6.260050 TCTCTTGAAACTAAACATTGACGCTT 59.740 34.615 0.00 0.00 0.00 4.68
140 141 6.198687 TCTTGAAACTAAACATTGACGCTTG 58.801 36.000 0.00 0.00 0.00 4.01
141 142 4.286910 TGAAACTAAACATTGACGCTTGC 58.713 39.130 0.00 0.00 0.00 4.01
142 143 4.036262 TGAAACTAAACATTGACGCTTGCT 59.964 37.500 0.00 0.00 0.00 3.91
143 144 4.568152 AACTAAACATTGACGCTTGCTT 57.432 36.364 0.00 0.00 0.00 3.91
144 145 4.568152 ACTAAACATTGACGCTTGCTTT 57.432 36.364 0.00 0.00 0.00 3.51
145 146 4.290155 ACTAAACATTGACGCTTGCTTTG 58.710 39.130 0.00 0.00 0.00 2.77
146 147 2.869233 AACATTGACGCTTGCTTTGT 57.131 40.000 0.00 0.00 0.00 2.83
147 148 2.869233 ACATTGACGCTTGCTTTGTT 57.131 40.000 0.00 0.00 0.00 2.83
148 149 3.163630 ACATTGACGCTTGCTTTGTTT 57.836 38.095 0.00 0.00 0.00 2.83
149 150 3.520569 ACATTGACGCTTGCTTTGTTTT 58.479 36.364 0.00 0.00 0.00 2.43
150 151 3.932089 ACATTGACGCTTGCTTTGTTTTT 59.068 34.783 0.00 0.00 0.00 1.94
151 152 3.987807 TTGACGCTTGCTTTGTTTTTG 57.012 38.095 0.00 0.00 0.00 2.44
152 153 3.223423 TGACGCTTGCTTTGTTTTTGA 57.777 38.095 0.00 0.00 0.00 2.69
153 154 3.779759 TGACGCTTGCTTTGTTTTTGAT 58.220 36.364 0.00 0.00 0.00 2.57
154 155 4.926244 TGACGCTTGCTTTGTTTTTGATA 58.074 34.783 0.00 0.00 0.00 2.15
155 156 4.737765 TGACGCTTGCTTTGTTTTTGATAC 59.262 37.500 0.00 0.00 0.00 2.24
156 157 4.677584 ACGCTTGCTTTGTTTTTGATACA 58.322 34.783 0.00 0.00 0.00 2.29
157 158 4.739716 ACGCTTGCTTTGTTTTTGATACAG 59.260 37.500 0.00 0.00 0.00 2.74
158 159 4.148696 CGCTTGCTTTGTTTTTGATACAGG 59.851 41.667 0.00 0.00 0.00 4.00
159 160 5.288804 GCTTGCTTTGTTTTTGATACAGGA 58.711 37.500 0.00 0.00 0.00 3.86
160 161 5.175673 GCTTGCTTTGTTTTTGATACAGGAC 59.824 40.000 0.00 0.00 0.00 3.85
161 162 5.843673 TGCTTTGTTTTTGATACAGGACA 57.156 34.783 0.00 0.00 0.00 4.02
162 163 6.214191 TGCTTTGTTTTTGATACAGGACAA 57.786 33.333 0.00 0.00 0.00 3.18
163 164 6.272318 TGCTTTGTTTTTGATACAGGACAAG 58.728 36.000 0.00 0.00 0.00 3.16
164 165 5.175673 GCTTTGTTTTTGATACAGGACAAGC 59.824 40.000 0.00 0.00 32.08 4.01
165 166 6.463995 TTTGTTTTTGATACAGGACAAGCT 57.536 33.333 0.00 0.00 0.00 3.74
166 167 7.575414 TTTGTTTTTGATACAGGACAAGCTA 57.425 32.000 0.00 0.00 0.00 3.32
167 168 6.554334 TGTTTTTGATACAGGACAAGCTAC 57.446 37.500 0.00 0.00 0.00 3.58
168 169 6.296026 TGTTTTTGATACAGGACAAGCTACT 58.704 36.000 0.00 0.00 0.00 2.57
169 170 6.204688 TGTTTTTGATACAGGACAAGCTACTG 59.795 38.462 0.00 0.00 38.19 2.74
170 171 5.483685 TTTGATACAGGACAAGCTACTGT 57.516 39.130 14.85 14.85 46.30 3.55
171 172 5.483685 TTGATACAGGACAAGCTACTGTT 57.516 39.130 15.45 6.80 42.38 3.16
172 173 4.820897 TGATACAGGACAAGCTACTGTTG 58.179 43.478 15.45 4.23 42.38 3.33
173 174 2.550830 ACAGGACAAGCTACTGTTGG 57.449 50.000 7.28 0.00 42.38 3.77
174 175 2.047061 ACAGGACAAGCTACTGTTGGA 58.953 47.619 7.28 0.00 42.38 3.53
175 176 2.037772 ACAGGACAAGCTACTGTTGGAG 59.962 50.000 7.28 0.00 42.38 3.86
176 177 1.002544 AGGACAAGCTACTGTTGGAGC 59.997 52.381 0.00 0.00 39.08 4.70
181 182 3.914984 GCTACTGTTGGAGCTGTGA 57.085 52.632 0.00 0.00 35.73 3.58
182 183 2.393271 GCTACTGTTGGAGCTGTGAT 57.607 50.000 0.00 0.00 35.73 3.06
183 184 2.704572 GCTACTGTTGGAGCTGTGATT 58.295 47.619 0.00 0.00 35.73 2.57
184 185 3.861840 GCTACTGTTGGAGCTGTGATTA 58.138 45.455 0.00 0.00 35.73 1.75
185 186 3.868077 GCTACTGTTGGAGCTGTGATTAG 59.132 47.826 0.00 0.00 35.73 1.73
186 187 4.382040 GCTACTGTTGGAGCTGTGATTAGA 60.382 45.833 0.00 0.00 35.73 2.10
187 188 4.623932 ACTGTTGGAGCTGTGATTAGAA 57.376 40.909 0.00 0.00 0.00 2.10
188 189 4.973168 ACTGTTGGAGCTGTGATTAGAAA 58.027 39.130 0.00 0.00 0.00 2.52
189 190 5.564550 ACTGTTGGAGCTGTGATTAGAAAT 58.435 37.500 0.00 0.00 0.00 2.17
190 191 5.645497 ACTGTTGGAGCTGTGATTAGAAATC 59.355 40.000 0.00 0.00 0.00 2.17
191 192 5.559770 TGTTGGAGCTGTGATTAGAAATCA 58.440 37.500 0.00 0.00 0.00 2.57
192 193 5.412594 TGTTGGAGCTGTGATTAGAAATCAC 59.587 40.000 20.64 20.64 46.28 3.06
193 194 4.517285 TGGAGCTGTGATTAGAAATCACC 58.483 43.478 23.16 12.92 45.70 4.02
194 195 4.019411 TGGAGCTGTGATTAGAAATCACCA 60.019 41.667 23.16 14.32 45.70 4.17
195 196 4.943705 GGAGCTGTGATTAGAAATCACCAA 59.056 41.667 23.16 10.13 45.70 3.67
196 197 5.065731 GGAGCTGTGATTAGAAATCACCAAG 59.934 44.000 23.16 17.51 45.70 3.61
197 198 4.946157 AGCTGTGATTAGAAATCACCAAGG 59.054 41.667 23.16 14.46 45.70 3.61
198 199 4.943705 GCTGTGATTAGAAATCACCAAGGA 59.056 41.667 23.16 9.01 45.70 3.36
199 200 5.065731 GCTGTGATTAGAAATCACCAAGGAG 59.934 44.000 23.16 16.46 45.70 3.69
200 201 6.373005 TGTGATTAGAAATCACCAAGGAGA 57.627 37.500 23.16 6.50 45.70 3.71
201 202 6.409704 TGTGATTAGAAATCACCAAGGAGAG 58.590 40.000 23.16 0.00 45.70 3.20
202 203 6.013379 TGTGATTAGAAATCACCAAGGAGAGT 60.013 38.462 23.16 0.00 45.70 3.24
203 204 6.881602 GTGATTAGAAATCACCAAGGAGAGTT 59.118 38.462 17.93 0.00 41.77 3.01
204 205 6.881065 TGATTAGAAATCACCAAGGAGAGTTG 59.119 38.462 4.05 0.00 0.00 3.16
205 206 4.713792 AGAAATCACCAAGGAGAGTTGT 57.286 40.909 4.05 0.00 0.00 3.32
206 207 5.053978 AGAAATCACCAAGGAGAGTTGTT 57.946 39.130 4.05 0.00 0.00 2.83
207 208 5.066593 AGAAATCACCAAGGAGAGTTGTTC 58.933 41.667 4.05 0.60 0.00 3.18
208 209 4.713792 AATCACCAAGGAGAGTTGTTCT 57.286 40.909 0.00 0.00 39.43 3.01
209 210 4.713792 ATCACCAAGGAGAGTTGTTCTT 57.286 40.909 0.00 0.00 35.87 2.52
210 211 4.503714 TCACCAAGGAGAGTTGTTCTTT 57.496 40.909 0.00 0.00 35.87 2.52
211 212 4.451900 TCACCAAGGAGAGTTGTTCTTTC 58.548 43.478 0.00 0.00 35.87 2.62
212 213 4.080582 TCACCAAGGAGAGTTGTTCTTTCA 60.081 41.667 0.00 0.00 35.87 2.69
213 214 4.640201 CACCAAGGAGAGTTGTTCTTTCAA 59.360 41.667 0.00 0.00 35.87 2.69
214 215 5.125417 CACCAAGGAGAGTTGTTCTTTCAAA 59.875 40.000 0.00 0.00 35.87 2.69
215 216 5.358160 ACCAAGGAGAGTTGTTCTTTCAAAG 59.642 40.000 0.00 0.00 35.87 2.77
216 217 5.221126 CCAAGGAGAGTTGTTCTTTCAAAGG 60.221 44.000 0.00 0.00 35.87 3.11
217 218 5.117406 AGGAGAGTTGTTCTTTCAAAGGT 57.883 39.130 0.00 0.00 35.87 3.50
218 219 4.884164 AGGAGAGTTGTTCTTTCAAAGGTG 59.116 41.667 0.00 0.00 35.87 4.00
219 220 4.036852 GGAGAGTTGTTCTTTCAAAGGTGG 59.963 45.833 0.00 0.00 35.87 4.61
220 221 4.855340 AGAGTTGTTCTTTCAAAGGTGGA 58.145 39.130 0.00 0.00 29.61 4.02
221 222 4.640647 AGAGTTGTTCTTTCAAAGGTGGAC 59.359 41.667 0.00 0.00 29.61 4.02
222 223 4.340617 AGTTGTTCTTTCAAAGGTGGACA 58.659 39.130 0.00 0.00 0.00 4.02
223 224 4.399303 AGTTGTTCTTTCAAAGGTGGACAG 59.601 41.667 0.00 0.00 0.00 3.51
224 225 3.963129 TGTTCTTTCAAAGGTGGACAGT 58.037 40.909 0.00 0.00 0.00 3.55
225 226 4.340617 TGTTCTTTCAAAGGTGGACAGTT 58.659 39.130 0.00 0.00 0.00 3.16
226 227 4.398044 TGTTCTTTCAAAGGTGGACAGTTC 59.602 41.667 0.00 0.00 0.00 3.01
227 228 3.202906 TCTTTCAAAGGTGGACAGTTCG 58.797 45.455 0.00 0.00 0.00 3.95
228 229 1.305201 TTCAAAGGTGGACAGTTCGC 58.695 50.000 0.00 0.00 0.00 4.70
229 230 0.534203 TCAAAGGTGGACAGTTCGCC 60.534 55.000 2.71 2.71 35.16 5.54
230 231 0.535102 CAAAGGTGGACAGTTCGCCT 60.535 55.000 8.33 8.33 46.03 5.52
231 232 0.250338 AAAGGTGGACAGTTCGCCTC 60.250 55.000 14.90 0.00 43.59 4.70
232 233 2.047179 GGTGGACAGTTCGCCTCC 60.047 66.667 3.86 0.00 32.41 4.30
233 234 2.047179 GTGGACAGTTCGCCTCCC 60.047 66.667 0.00 0.00 0.00 4.30
234 235 3.319198 TGGACAGTTCGCCTCCCC 61.319 66.667 0.00 0.00 0.00 4.81
235 236 4.452733 GGACAGTTCGCCTCCCCG 62.453 72.222 0.00 0.00 0.00 5.73
236 237 3.692406 GACAGTTCGCCTCCCCGT 61.692 66.667 0.00 0.00 0.00 5.28
237 238 2.283388 ACAGTTCGCCTCCCCGTA 60.283 61.111 0.00 0.00 0.00 4.02
238 239 1.880819 GACAGTTCGCCTCCCCGTAA 61.881 60.000 0.00 0.00 0.00 3.18
239 240 1.262640 ACAGTTCGCCTCCCCGTAAT 61.263 55.000 0.00 0.00 0.00 1.89
240 241 0.810031 CAGTTCGCCTCCCCGTAATG 60.810 60.000 0.00 0.00 0.00 1.90
241 242 0.974010 AGTTCGCCTCCCCGTAATGA 60.974 55.000 0.00 0.00 0.00 2.57
242 243 0.808847 GTTCGCCTCCCCGTAATGAC 60.809 60.000 0.00 0.00 0.00 3.06
254 255 3.439932 CGTAATGACGCTGCATATTCC 57.560 47.619 0.00 0.00 43.21 3.01
255 256 2.799978 CGTAATGACGCTGCATATTCCA 59.200 45.455 0.00 0.00 43.21 3.53
256 257 3.247411 CGTAATGACGCTGCATATTCCAA 59.753 43.478 0.00 0.00 43.21 3.53
257 258 3.698029 AATGACGCTGCATATTCCAAC 57.302 42.857 0.00 0.00 0.00 3.77
258 259 1.378531 TGACGCTGCATATTCCAACC 58.621 50.000 0.00 0.00 0.00 3.77
259 260 1.065491 TGACGCTGCATATTCCAACCT 60.065 47.619 0.00 0.00 0.00 3.50
260 261 2.169561 TGACGCTGCATATTCCAACCTA 59.830 45.455 0.00 0.00 0.00 3.08
261 262 3.181455 TGACGCTGCATATTCCAACCTAT 60.181 43.478 0.00 0.00 0.00 2.57
262 263 3.403038 ACGCTGCATATTCCAACCTATC 58.597 45.455 0.00 0.00 0.00 2.08
263 264 2.744202 CGCTGCATATTCCAACCTATCC 59.256 50.000 0.00 0.00 0.00 2.59
264 265 3.754965 GCTGCATATTCCAACCTATCCA 58.245 45.455 0.00 0.00 0.00 3.41
265 266 4.144297 GCTGCATATTCCAACCTATCCAA 58.856 43.478 0.00 0.00 0.00 3.53
266 267 4.217118 GCTGCATATTCCAACCTATCCAAG 59.783 45.833 0.00 0.00 0.00 3.61
267 268 5.380043 CTGCATATTCCAACCTATCCAAGT 58.620 41.667 0.00 0.00 0.00 3.16
268 269 5.765510 TGCATATTCCAACCTATCCAAGTT 58.234 37.500 0.00 0.00 0.00 2.66
269 270 5.593909 TGCATATTCCAACCTATCCAAGTTG 59.406 40.000 0.00 0.00 42.41 3.16
283 284 4.526970 TCCAAGTTGGATAGCATTCTTCC 58.473 43.478 21.05 0.00 42.67 3.46
284 285 4.018506 TCCAAGTTGGATAGCATTCTTCCA 60.019 41.667 21.05 0.00 42.67 3.53
285 286 4.706476 CCAAGTTGGATAGCATTCTTCCAA 59.294 41.667 17.60 0.00 45.00 3.53
293 294 9.866655 TTGGATAGCATTCTTCCAAAGTATATT 57.133 29.630 1.28 0.00 44.41 1.28
294 295 9.866655 TGGATAGCATTCTTCCAAAGTATATTT 57.133 29.630 0.00 0.00 36.62 1.40
305 306 9.252962 CTTCCAAAGTATATTTGATTTGCATCC 57.747 33.333 2.01 0.00 32.54 3.51
306 307 8.537728 TCCAAAGTATATTTGATTTGCATCCT 57.462 30.769 2.01 0.00 32.54 3.24
307 308 8.415553 TCCAAAGTATATTTGATTTGCATCCTG 58.584 33.333 2.01 0.00 32.54 3.86
308 309 8.415553 CCAAAGTATATTTGATTTGCATCCTGA 58.584 33.333 2.01 0.00 32.54 3.86
309 310 9.459640 CAAAGTATATTTGATTTGCATCCTGAG 57.540 33.333 0.00 0.00 0.00 3.35
310 311 8.985315 AAGTATATTTGATTTGCATCCTGAGA 57.015 30.769 0.00 0.00 0.00 3.27
311 312 8.985315 AGTATATTTGATTTGCATCCTGAGAA 57.015 30.769 0.00 0.00 0.00 2.87
312 313 9.064706 AGTATATTTGATTTGCATCCTGAGAAG 57.935 33.333 0.00 0.00 0.00 2.85
313 314 5.593679 ATTTGATTTGCATCCTGAGAAGG 57.406 39.130 0.00 0.00 0.00 3.46
314 315 2.372264 TGATTTGCATCCTGAGAAGGC 58.628 47.619 0.00 0.00 0.00 4.35
315 316 2.025605 TGATTTGCATCCTGAGAAGGCT 60.026 45.455 0.00 0.00 0.00 4.58
316 317 2.119801 TTTGCATCCTGAGAAGGCTC 57.880 50.000 0.00 0.00 41.67 4.70
317 318 0.254178 TTGCATCCTGAGAAGGCTCC 59.746 55.000 0.00 0.00 40.55 4.70
318 319 1.148048 GCATCCTGAGAAGGCTCCC 59.852 63.158 0.00 0.00 40.55 4.30
319 320 1.344191 GCATCCTGAGAAGGCTCCCT 61.344 60.000 0.00 0.00 40.55 4.20
320 321 0.758123 CATCCTGAGAAGGCTCCCTC 59.242 60.000 9.22 9.22 40.55 4.30
321 322 0.399806 ATCCTGAGAAGGCTCCCTCC 60.400 60.000 12.47 0.00 40.55 4.30
322 323 2.069430 CCTGAGAAGGCTCCCTCCC 61.069 68.421 12.47 0.00 40.55 4.30
323 324 2.041265 TGAGAAGGCTCCCTCCCC 59.959 66.667 12.47 0.00 40.55 4.81
324 325 2.370633 GAGAAGGCTCCCTCCCCT 59.629 66.667 5.78 0.00 35.01 4.79
325 326 2.041928 AGAAGGCTCCCTCCCCTG 59.958 66.667 0.00 0.00 30.89 4.45
326 327 2.041265 GAAGGCTCCCTCCCCTGA 59.959 66.667 0.00 0.00 30.89 3.86
327 328 1.385206 GAAGGCTCCCTCCCCTGAT 60.385 63.158 0.00 0.00 30.89 2.90
328 329 1.695597 AAGGCTCCCTCCCCTGATG 60.696 63.158 0.00 0.00 30.89 3.07
329 330 3.174265 GGCTCCCTCCCCTGATGG 61.174 72.222 0.00 0.00 0.00 3.51
330 331 3.883549 GCTCCCTCCCCTGATGGC 61.884 72.222 0.00 0.00 0.00 4.40
331 332 2.040043 CTCCCTCCCCTGATGGCT 60.040 66.667 0.00 0.00 0.00 4.75
332 333 1.695597 CTCCCTCCCCTGATGGCTT 60.696 63.158 0.00 0.00 0.00 4.35
333 334 1.230281 TCCCTCCCCTGATGGCTTT 60.230 57.895 0.00 0.00 0.00 3.51
334 335 0.045623 TCCCTCCCCTGATGGCTTTA 59.954 55.000 0.00 0.00 0.00 1.85
335 336 0.183731 CCCTCCCCTGATGGCTTTAC 59.816 60.000 0.00 0.00 0.00 2.01
336 337 1.216990 CCTCCCCTGATGGCTTTACT 58.783 55.000 0.00 0.00 0.00 2.24
337 338 1.133976 CCTCCCCTGATGGCTTTACTG 60.134 57.143 0.00 0.00 0.00 2.74
338 339 0.255890 TCCCCTGATGGCTTTACTGC 59.744 55.000 0.00 0.00 0.00 4.40
339 340 0.034186 CCCCTGATGGCTTTACTGCA 60.034 55.000 0.00 0.00 34.04 4.41
340 341 1.098050 CCCTGATGGCTTTACTGCAC 58.902 55.000 0.00 0.00 34.04 4.57
341 342 1.614051 CCCTGATGGCTTTACTGCACA 60.614 52.381 0.00 0.00 34.04 4.57
342 343 2.372264 CCTGATGGCTTTACTGCACAT 58.628 47.619 0.00 0.00 34.04 3.21
343 344 2.756760 CCTGATGGCTTTACTGCACATT 59.243 45.455 0.00 0.00 34.04 2.71
344 345 3.194116 CCTGATGGCTTTACTGCACATTT 59.806 43.478 0.00 0.00 34.04 2.32
345 346 4.418392 CTGATGGCTTTACTGCACATTTC 58.582 43.478 0.00 0.00 34.04 2.17
346 347 4.081406 TGATGGCTTTACTGCACATTTCT 58.919 39.130 0.00 0.00 34.04 2.52
347 348 4.523943 TGATGGCTTTACTGCACATTTCTT 59.476 37.500 0.00 0.00 34.04 2.52
348 349 4.503741 TGGCTTTACTGCACATTTCTTC 57.496 40.909 0.00 0.00 34.04 2.87
349 350 3.888323 TGGCTTTACTGCACATTTCTTCA 59.112 39.130 0.00 0.00 34.04 3.02
350 351 4.022935 TGGCTTTACTGCACATTTCTTCAG 60.023 41.667 0.00 0.00 34.04 3.02
351 352 4.216257 GGCTTTACTGCACATTTCTTCAGA 59.784 41.667 0.00 0.00 34.04 3.27
352 353 5.278463 GGCTTTACTGCACATTTCTTCAGAA 60.278 40.000 0.00 0.00 34.04 3.02
353 354 6.208644 GCTTTACTGCACATTTCTTCAGAAA 58.791 36.000 4.47 4.47 46.60 2.52
354 355 6.142958 GCTTTACTGCACATTTCTTCAGAAAC 59.857 38.462 4.08 0.00 45.55 2.78
355 356 6.942532 TTACTGCACATTTCTTCAGAAACT 57.057 33.333 4.08 0.00 45.55 2.66
356 357 8.445275 TTTACTGCACATTTCTTCAGAAACTA 57.555 30.769 4.08 0.00 45.55 2.24
357 358 6.305693 ACTGCACATTTCTTCAGAAACTAC 57.694 37.500 4.08 0.00 45.55 2.73
358 359 6.058183 ACTGCACATTTCTTCAGAAACTACT 58.942 36.000 4.08 0.00 45.55 2.57
359 360 6.017605 ACTGCACATTTCTTCAGAAACTACTG 60.018 38.462 4.08 2.26 45.55 2.74
360 361 5.239306 TGCACATTTCTTCAGAAACTACTGG 59.761 40.000 4.08 0.00 45.55 4.00
361 362 5.335191 GCACATTTCTTCAGAAACTACTGGG 60.335 44.000 4.08 1.96 45.55 4.45
362 363 5.997746 CACATTTCTTCAGAAACTACTGGGA 59.002 40.000 4.08 0.00 45.55 4.37
363 364 5.998363 ACATTTCTTCAGAAACTACTGGGAC 59.002 40.000 4.08 0.00 45.55 4.46
364 365 4.618920 TTCTTCAGAAACTACTGGGACC 57.381 45.455 0.00 0.00 38.31 4.46
365 366 3.858135 TCTTCAGAAACTACTGGGACCT 58.142 45.455 0.00 0.00 38.31 3.85
366 367 3.578716 TCTTCAGAAACTACTGGGACCTG 59.421 47.826 0.00 0.00 38.31 4.00
367 368 1.623811 TCAGAAACTACTGGGACCTGC 59.376 52.381 0.00 0.00 38.31 4.85
368 369 1.625818 CAGAAACTACTGGGACCTGCT 59.374 52.381 0.00 0.00 34.64 4.24
369 370 1.625818 AGAAACTACTGGGACCTGCTG 59.374 52.381 0.00 0.00 0.00 4.41
370 371 1.623811 GAAACTACTGGGACCTGCTGA 59.376 52.381 0.00 0.00 0.00 4.26
371 372 1.729586 AACTACTGGGACCTGCTGAA 58.270 50.000 0.00 0.00 0.00 3.02
372 373 1.729586 ACTACTGGGACCTGCTGAAA 58.270 50.000 0.00 0.00 0.00 2.69
373 374 1.348036 ACTACTGGGACCTGCTGAAAC 59.652 52.381 0.00 0.00 0.00 2.78
374 375 0.690762 TACTGGGACCTGCTGAAACC 59.309 55.000 0.00 0.00 0.00 3.27
375 376 1.062488 ACTGGGACCTGCTGAAACCT 61.062 55.000 0.00 0.00 0.00 3.50
376 377 0.607489 CTGGGACCTGCTGAAACCTG 60.607 60.000 0.00 0.00 0.00 4.00
377 378 1.059584 TGGGACCTGCTGAAACCTGA 61.060 55.000 0.00 0.00 0.00 3.86
378 379 0.606673 GGGACCTGCTGAAACCTGAC 60.607 60.000 0.00 0.00 0.00 3.51
379 380 0.108585 GGACCTGCTGAAACCTGACA 59.891 55.000 0.00 0.00 0.00 3.58
380 381 1.271597 GGACCTGCTGAAACCTGACAT 60.272 52.381 0.00 0.00 0.00 3.06
381 382 2.079925 GACCTGCTGAAACCTGACATC 58.920 52.381 0.00 0.00 0.00 3.06
382 383 1.421268 ACCTGCTGAAACCTGACATCA 59.579 47.619 0.00 0.00 0.00 3.07
383 384 2.040813 ACCTGCTGAAACCTGACATCAT 59.959 45.455 0.00 0.00 0.00 2.45
384 385 2.422479 CCTGCTGAAACCTGACATCATG 59.578 50.000 0.00 0.00 0.00 3.07
385 386 1.814394 TGCTGAAACCTGACATCATGC 59.186 47.619 0.00 0.00 0.00 4.06
386 387 1.133790 GCTGAAACCTGACATCATGCC 59.866 52.381 0.00 0.00 0.00 4.40
387 388 2.719739 CTGAAACCTGACATCATGCCT 58.280 47.619 0.00 0.00 0.00 4.75
388 389 2.422479 CTGAAACCTGACATCATGCCTG 59.578 50.000 0.00 0.00 0.00 4.85
389 390 1.133790 GAAACCTGACATCATGCCTGC 59.866 52.381 0.00 0.00 0.00 4.85
390 391 0.038599 AACCTGACATCATGCCTGCA 59.961 50.000 0.00 0.00 0.00 4.41
391 392 0.257905 ACCTGACATCATGCCTGCAT 59.742 50.000 0.00 0.00 37.08 3.96
392 393 1.341679 ACCTGACATCATGCCTGCATT 60.342 47.619 0.97 0.00 33.90 3.56
393 394 1.337071 CCTGACATCATGCCTGCATTC 59.663 52.381 0.97 0.00 33.90 2.67
394 395 1.337071 CTGACATCATGCCTGCATTCC 59.663 52.381 0.97 0.00 33.90 3.01
395 396 0.672342 GACATCATGCCTGCATTCCC 59.328 55.000 0.97 0.00 33.90 3.97
396 397 0.032912 ACATCATGCCTGCATTCCCA 60.033 50.000 0.97 0.00 33.90 4.37
397 398 0.387929 CATCATGCCTGCATTCCCAC 59.612 55.000 0.97 0.00 33.90 4.61
398 399 0.032912 ATCATGCCTGCATTCCCACA 60.033 50.000 0.97 0.00 33.90 4.17
399 400 0.966875 TCATGCCTGCATTCCCACAC 60.967 55.000 0.97 0.00 33.90 3.82
400 401 0.968901 CATGCCTGCATTCCCACACT 60.969 55.000 0.97 0.00 33.90 3.55
401 402 0.251922 ATGCCTGCATTCCCACACTT 60.252 50.000 0.00 0.00 31.82 3.16
402 403 0.895100 TGCCTGCATTCCCACACTTC 60.895 55.000 0.00 0.00 0.00 3.01
403 404 1.598701 GCCTGCATTCCCACACTTCC 61.599 60.000 0.00 0.00 0.00 3.46
404 405 0.251297 CCTGCATTCCCACACTTCCA 60.251 55.000 0.00 0.00 0.00 3.53
405 406 1.619654 CTGCATTCCCACACTTCCAA 58.380 50.000 0.00 0.00 0.00 3.53
406 407 1.962807 CTGCATTCCCACACTTCCAAA 59.037 47.619 0.00 0.00 0.00 3.28
407 408 2.564062 CTGCATTCCCACACTTCCAAAT 59.436 45.455 0.00 0.00 0.00 2.32
408 409 2.971330 TGCATTCCCACACTTCCAAATT 59.029 40.909 0.00 0.00 0.00 1.82
409 410 3.006752 TGCATTCCCACACTTCCAAATTC 59.993 43.478 0.00 0.00 0.00 2.17
410 411 3.259123 GCATTCCCACACTTCCAAATTCT 59.741 43.478 0.00 0.00 0.00 2.40
411 412 4.813027 CATTCCCACACTTCCAAATTCTG 58.187 43.478 0.00 0.00 0.00 3.02
412 413 3.874383 TCCCACACTTCCAAATTCTGA 57.126 42.857 0.00 0.00 0.00 3.27
413 414 4.177537 TCCCACACTTCCAAATTCTGAA 57.822 40.909 0.00 0.00 0.00 3.02
414 415 3.888930 TCCCACACTTCCAAATTCTGAAC 59.111 43.478 0.00 0.00 0.00 3.18
415 416 3.891366 CCCACACTTCCAAATTCTGAACT 59.109 43.478 0.00 0.00 0.00 3.01
416 417 4.022849 CCCACACTTCCAAATTCTGAACTC 60.023 45.833 0.00 0.00 0.00 3.01
417 418 4.022849 CCACACTTCCAAATTCTGAACTCC 60.023 45.833 0.00 0.00 0.00 3.85
418 419 4.022849 CACACTTCCAAATTCTGAACTCCC 60.023 45.833 0.00 0.00 0.00 4.30
419 420 4.144297 CACTTCCAAATTCTGAACTCCCA 58.856 43.478 0.00 0.00 0.00 4.37
420 421 4.217118 CACTTCCAAATTCTGAACTCCCAG 59.783 45.833 0.00 0.00 35.55 4.45
421 422 4.104738 ACTTCCAAATTCTGAACTCCCAGA 59.895 41.667 0.00 0.00 41.06 3.86
426 427 2.847327 TTCTGAACTCCCAGAAGCTG 57.153 50.000 0.00 0.00 45.25 4.24
427 428 1.722034 TCTGAACTCCCAGAAGCTGT 58.278 50.000 0.00 0.00 39.96 4.40
428 429 2.050144 TCTGAACTCCCAGAAGCTGTT 58.950 47.619 0.00 0.00 39.96 3.16
429 430 2.037772 TCTGAACTCCCAGAAGCTGTTC 59.962 50.000 4.37 4.37 39.96 3.18
430 431 1.072331 TGAACTCCCAGAAGCTGTTCC 59.928 52.381 7.99 0.00 36.98 3.62
431 432 1.349357 GAACTCCCAGAAGCTGTTCCT 59.651 52.381 0.00 0.00 33.16 3.36
432 433 1.439543 ACTCCCAGAAGCTGTTCCTT 58.560 50.000 0.00 0.00 32.48 3.36
433 434 1.349357 ACTCCCAGAAGCTGTTCCTTC 59.651 52.381 0.00 0.00 41.15 3.46
442 443 5.302357 GAAGCTGTTCCTTCTTTATGGTG 57.698 43.478 0.00 0.00 38.50 4.17
443 444 3.084786 AGCTGTTCCTTCTTTATGGTGC 58.915 45.455 0.00 0.00 0.00 5.01
444 445 2.164422 GCTGTTCCTTCTTTATGGTGCC 59.836 50.000 0.00 0.00 0.00 5.01
445 446 3.420893 CTGTTCCTTCTTTATGGTGCCA 58.579 45.455 0.00 0.00 0.00 4.92
446 447 3.153919 TGTTCCTTCTTTATGGTGCCAC 58.846 45.455 0.00 0.00 0.00 5.01
447 448 2.492088 GTTCCTTCTTTATGGTGCCACC 59.508 50.000 7.01 7.01 39.22 4.61
455 456 3.930144 TGGTGCCACCATTACCCT 58.070 55.556 13.83 0.00 44.79 4.34
456 457 3.106441 TGGTGCCACCATTACCCTA 57.894 52.632 13.83 0.00 44.79 3.53
457 458 0.621609 TGGTGCCACCATTACCCTAC 59.378 55.000 13.83 0.00 44.79 3.18
458 459 0.916809 GGTGCCACCATTACCCTACT 59.083 55.000 9.55 0.00 38.42 2.57
459 460 1.408266 GGTGCCACCATTACCCTACTG 60.408 57.143 9.55 0.00 38.42 2.74
460 461 0.254747 TGCCACCATTACCCTACTGC 59.745 55.000 0.00 0.00 0.00 4.40
461 462 0.465642 GCCACCATTACCCTACTGCC 60.466 60.000 0.00 0.00 0.00 4.85
462 463 0.179056 CCACCATTACCCTACTGCCG 60.179 60.000 0.00 0.00 0.00 5.69
463 464 0.828022 CACCATTACCCTACTGCCGA 59.172 55.000 0.00 0.00 0.00 5.54
464 465 1.208535 CACCATTACCCTACTGCCGAA 59.791 52.381 0.00 0.00 0.00 4.30
465 466 1.910671 ACCATTACCCTACTGCCGAAA 59.089 47.619 0.00 0.00 0.00 3.46
466 467 2.285977 CCATTACCCTACTGCCGAAAC 58.714 52.381 0.00 0.00 0.00 2.78
467 468 2.355310 CCATTACCCTACTGCCGAAACA 60.355 50.000 0.00 0.00 0.00 2.83
468 469 2.460757 TTACCCTACTGCCGAAACAC 57.539 50.000 0.00 0.00 0.00 3.32
469 470 0.244450 TACCCTACTGCCGAAACACG 59.756 55.000 0.00 0.00 42.18 4.49
470 471 1.005394 CCCTACTGCCGAAACACGT 60.005 57.895 0.00 0.00 40.78 4.49
471 472 0.601841 CCCTACTGCCGAAACACGTT 60.602 55.000 0.00 0.00 40.78 3.99
472 473 0.511221 CCTACTGCCGAAACACGTTG 59.489 55.000 0.00 0.00 40.78 4.10
473 474 0.511221 CTACTGCCGAAACACGTTGG 59.489 55.000 0.00 0.00 40.78 3.77
474 475 0.104487 TACTGCCGAAACACGTTGGA 59.896 50.000 0.00 0.00 40.78 3.53
475 476 1.157870 ACTGCCGAAACACGTTGGAG 61.158 55.000 0.00 0.00 40.78 3.86
476 477 2.251371 GCCGAAACACGTTGGAGC 59.749 61.111 0.00 0.00 40.78 4.70
477 478 2.251642 GCCGAAACACGTTGGAGCT 61.252 57.895 0.00 0.00 40.78 4.09
478 479 0.947180 GCCGAAACACGTTGGAGCTA 60.947 55.000 0.00 0.00 40.78 3.32
479 480 1.504359 CCGAAACACGTTGGAGCTAA 58.496 50.000 0.00 0.00 40.78 3.09
480 481 1.193874 CCGAAACACGTTGGAGCTAAC 59.806 52.381 0.00 0.00 40.78 2.34
481 482 1.862201 CGAAACACGTTGGAGCTAACA 59.138 47.619 0.57 0.00 37.22 2.41
482 483 2.285756 CGAAACACGTTGGAGCTAACAA 59.714 45.455 0.57 0.04 37.22 2.83
483 484 3.242478 CGAAACACGTTGGAGCTAACAAA 60.242 43.478 5.01 0.00 37.22 2.83
484 485 3.685836 AACACGTTGGAGCTAACAAAC 57.314 42.857 5.01 0.00 0.00 2.93
485 486 2.634600 ACACGTTGGAGCTAACAAACA 58.365 42.857 5.01 0.00 0.00 2.83
486 487 3.211045 ACACGTTGGAGCTAACAAACAT 58.789 40.909 5.01 0.00 0.00 2.71
487 488 3.250040 ACACGTTGGAGCTAACAAACATC 59.750 43.478 5.01 0.00 0.00 3.06
488 489 3.249799 CACGTTGGAGCTAACAAACATCA 59.750 43.478 5.01 0.00 0.00 3.07
489 490 3.498397 ACGTTGGAGCTAACAAACATCAG 59.502 43.478 5.01 0.00 0.00 2.90
490 491 3.120199 CGTTGGAGCTAACAAACATCAGG 60.120 47.826 5.01 0.00 0.00 3.86
491 492 4.072131 GTTGGAGCTAACAAACATCAGGA 58.928 43.478 5.01 0.00 0.00 3.86
492 493 3.674997 TGGAGCTAACAAACATCAGGAC 58.325 45.455 0.00 0.00 0.00 3.85
493 494 3.327757 TGGAGCTAACAAACATCAGGACT 59.672 43.478 0.00 0.00 0.00 3.85
494 495 4.202461 TGGAGCTAACAAACATCAGGACTT 60.202 41.667 0.00 0.00 0.00 3.01
495 496 4.762251 GGAGCTAACAAACATCAGGACTTT 59.238 41.667 0.00 0.00 0.00 2.66
496 497 5.938125 GGAGCTAACAAACATCAGGACTTTA 59.062 40.000 0.00 0.00 0.00 1.85
497 498 6.430000 GGAGCTAACAAACATCAGGACTTTAA 59.570 38.462 0.00 0.00 0.00 1.52
498 499 7.040686 GGAGCTAACAAACATCAGGACTTTAAA 60.041 37.037 0.00 0.00 0.00 1.52
499 500 7.649057 AGCTAACAAACATCAGGACTTTAAAC 58.351 34.615 0.00 0.00 0.00 2.01
500 501 6.861572 GCTAACAAACATCAGGACTTTAAACC 59.138 38.462 0.00 0.00 0.00 3.27
501 502 7.255486 GCTAACAAACATCAGGACTTTAAACCT 60.255 37.037 0.00 0.00 36.92 3.50
502 503 9.280174 CTAACAAACATCAGGACTTTAAACCTA 57.720 33.333 0.00 0.00 34.87 3.08
503 504 8.706322 AACAAACATCAGGACTTTAAACCTAT 57.294 30.769 0.00 0.00 34.87 2.57
504 505 8.706322 ACAAACATCAGGACTTTAAACCTATT 57.294 30.769 0.00 0.00 34.87 1.73
505 506 9.802039 ACAAACATCAGGACTTTAAACCTATTA 57.198 29.630 0.00 0.00 34.87 0.98
507 508 8.507524 AACATCAGGACTTTAAACCTATTAGC 57.492 34.615 0.00 0.00 34.87 3.09
508 509 7.054751 ACATCAGGACTTTAAACCTATTAGCC 58.945 38.462 0.00 0.00 34.87 3.93
509 510 6.886178 TCAGGACTTTAAACCTATTAGCCT 57.114 37.500 0.00 0.00 34.87 4.58
510 511 7.983166 TCAGGACTTTAAACCTATTAGCCTA 57.017 36.000 0.00 0.00 34.87 3.93
511 512 8.562949 TCAGGACTTTAAACCTATTAGCCTAT 57.437 34.615 0.00 0.00 34.87 2.57
512 513 8.999895 TCAGGACTTTAAACCTATTAGCCTATT 58.000 33.333 0.00 0.00 34.87 1.73
513 514 9.628500 CAGGACTTTAAACCTATTAGCCTATTT 57.372 33.333 0.00 0.00 34.87 1.40
524 525 8.151596 ACCTATTAGCCTATTTTACTTCTCTGC 58.848 37.037 0.00 0.00 0.00 4.26
525 526 8.371699 CCTATTAGCCTATTTTACTTCTCTGCT 58.628 37.037 0.00 0.00 0.00 4.24
528 529 6.168270 AGCCTATTTTACTTCTCTGCTAGG 57.832 41.667 0.00 0.00 0.00 3.02
529 530 4.752604 GCCTATTTTACTTCTCTGCTAGGC 59.247 45.833 0.00 0.00 42.11 3.93
530 531 5.454045 GCCTATTTTACTTCTCTGCTAGGCT 60.454 44.000 9.44 0.00 44.17 4.58
531 532 6.587273 CCTATTTTACTTCTCTGCTAGGCTT 58.413 40.000 0.00 0.00 0.00 4.35
532 533 6.481644 CCTATTTTACTTCTCTGCTAGGCTTG 59.518 42.308 0.00 0.00 0.00 4.01
533 534 2.969628 TACTTCTCTGCTAGGCTTGC 57.030 50.000 14.14 14.14 0.00 4.01
534 535 1.274712 ACTTCTCTGCTAGGCTTGCT 58.725 50.000 20.97 0.00 0.00 3.91
535 536 1.066286 ACTTCTCTGCTAGGCTTGCTG 60.066 52.381 20.97 19.79 0.00 4.41
536 537 0.392193 TTCTCTGCTAGGCTTGCTGC 60.392 55.000 20.97 8.27 41.94 5.25
569 570 0.533755 GCCAATAGCTCCTGTGCGAT 60.534 55.000 0.00 0.00 38.99 4.58
584 585 2.088969 GTGCGATGTTTTTCATGCGAAC 59.911 45.455 0.00 0.00 36.83 3.95
667 668 0.815213 GCTCCAATGCGACATGGCTA 60.815 55.000 0.00 0.00 36.62 3.93
732 733 0.394762 TATGACACGCGGGACCTAGT 60.395 55.000 19.19 0.00 0.00 2.57
1150 1170 6.038382 GGTCTAATTTCTCCCGATTTCTTTCC 59.962 42.308 0.00 0.00 0.00 3.13
1705 1731 4.284490 AGTGTTCATGCTCTGTTTCCTCTA 59.716 41.667 0.00 0.00 0.00 2.43
1800 1837 2.570415 TGTTGGGCCGTGAGAAAATA 57.430 45.000 0.00 0.00 0.00 1.40
1928 1966 6.937465 TGTTTTTACTTTGGCCTTTTTCTTGT 59.063 30.769 3.32 0.00 0.00 3.16
2081 2123 5.067674 GCATTTCCTAGTTGCATGTCCATAA 59.932 40.000 0.00 0.00 36.40 1.90
2199 2241 3.225104 AGCAACCCATAGCAATACATGG 58.775 45.455 0.00 0.00 41.25 3.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 9.866798 TGCACAATAGCAAAATAACAATATTCA 57.133 25.926 0.00 0.00 42.46 2.57
12 13 9.090692 GAATCTGCACAATAGCAAAATAACAAT 57.909 29.630 0.00 0.00 45.13 2.71
13 14 8.306038 AGAATCTGCACAATAGCAAAATAACAA 58.694 29.630 0.00 0.00 45.13 2.83
14 15 7.756272 CAGAATCTGCACAATAGCAAAATAACA 59.244 33.333 0.00 0.00 45.13 2.41
15 16 8.112099 CAGAATCTGCACAATAGCAAAATAAC 57.888 34.615 0.00 0.00 45.13 1.89
32 33 5.525012 TCATAATGTTTCGGAGCAGAATCTG 59.475 40.000 5.78 5.78 34.12 2.90
33 34 5.674525 TCATAATGTTTCGGAGCAGAATCT 58.325 37.500 0.00 0.00 0.00 2.40
34 35 5.755375 TCTCATAATGTTTCGGAGCAGAATC 59.245 40.000 0.00 0.00 0.00 2.52
35 36 5.674525 TCTCATAATGTTTCGGAGCAGAAT 58.325 37.500 0.00 0.00 0.00 2.40
36 37 5.084818 TCTCATAATGTTTCGGAGCAGAA 57.915 39.130 0.00 0.00 0.00 3.02
37 38 4.402474 TCTCTCATAATGTTTCGGAGCAGA 59.598 41.667 0.00 0.00 0.00 4.26
38 39 4.686972 TCTCTCATAATGTTTCGGAGCAG 58.313 43.478 0.00 0.00 0.00 4.24
39 40 4.686972 CTCTCTCATAATGTTTCGGAGCA 58.313 43.478 0.00 0.00 0.00 4.26
40 41 3.492756 GCTCTCTCATAATGTTTCGGAGC 59.507 47.826 0.00 0.00 37.19 4.70
41 42 4.686972 TGCTCTCTCATAATGTTTCGGAG 58.313 43.478 0.00 0.00 0.00 4.63
42 43 4.736126 TGCTCTCTCATAATGTTTCGGA 57.264 40.909 0.00 0.00 0.00 4.55
43 44 4.631377 TGTTGCTCTCTCATAATGTTTCGG 59.369 41.667 0.00 0.00 0.00 4.30
44 45 5.784750 TGTTGCTCTCTCATAATGTTTCG 57.215 39.130 0.00 0.00 0.00 3.46
45 46 6.026513 GCTTGTTGCTCTCTCATAATGTTTC 58.973 40.000 0.00 0.00 38.95 2.78
46 47 5.947443 GCTTGTTGCTCTCTCATAATGTTT 58.053 37.500 0.00 0.00 38.95 2.83
47 48 5.557891 GCTTGTTGCTCTCTCATAATGTT 57.442 39.130 0.00 0.00 38.95 2.71
64 65 4.281688 AGAAACATGGCATAACAAGCTTGT 59.718 37.500 26.36 26.36 44.72 3.16
65 66 4.813027 AGAAACATGGCATAACAAGCTTG 58.187 39.130 24.84 24.84 0.00 4.01
66 67 5.232463 CAAGAAACATGGCATAACAAGCTT 58.768 37.500 0.00 0.00 0.00 3.74
67 68 4.813027 CAAGAAACATGGCATAACAAGCT 58.187 39.130 0.00 0.00 0.00 3.74
68 69 3.368843 GCAAGAAACATGGCATAACAAGC 59.631 43.478 0.00 0.00 0.00 4.01
69 70 4.558178 TGCAAGAAACATGGCATAACAAG 58.442 39.130 0.00 0.00 0.00 3.16
70 71 4.597404 TGCAAGAAACATGGCATAACAA 57.403 36.364 0.00 0.00 0.00 2.83
71 72 4.804868 ATGCAAGAAACATGGCATAACA 57.195 36.364 0.00 0.00 44.52 2.41
72 73 5.163834 CCAAATGCAAGAAACATGGCATAAC 60.164 40.000 0.00 0.00 45.52 1.89
73 74 4.936411 CCAAATGCAAGAAACATGGCATAA 59.064 37.500 0.00 0.00 45.52 1.90
74 75 4.222366 TCCAAATGCAAGAAACATGGCATA 59.778 37.500 0.00 0.00 45.52 3.14
76 77 2.367894 TCCAAATGCAAGAAACATGGCA 59.632 40.909 0.00 0.00 41.00 4.92
77 78 2.738314 GTCCAAATGCAAGAAACATGGC 59.262 45.455 0.00 0.00 0.00 4.40
78 79 3.007182 AGGTCCAAATGCAAGAAACATGG 59.993 43.478 0.00 0.00 0.00 3.66
79 80 4.240096 GAGGTCCAAATGCAAGAAACATG 58.760 43.478 0.00 0.00 0.00 3.21
80 81 3.896888 TGAGGTCCAAATGCAAGAAACAT 59.103 39.130 0.00 0.00 0.00 2.71
81 82 3.295093 TGAGGTCCAAATGCAAGAAACA 58.705 40.909 0.00 0.00 0.00 2.83
82 83 4.488879 GATGAGGTCCAAATGCAAGAAAC 58.511 43.478 0.00 0.00 0.00 2.78
83 84 3.191162 CGATGAGGTCCAAATGCAAGAAA 59.809 43.478 0.00 0.00 0.00 2.52
84 85 2.749076 CGATGAGGTCCAAATGCAAGAA 59.251 45.455 0.00 0.00 0.00 2.52
85 86 2.358957 CGATGAGGTCCAAATGCAAGA 58.641 47.619 0.00 0.00 0.00 3.02
86 87 1.402968 CCGATGAGGTCCAAATGCAAG 59.597 52.381 0.00 0.00 34.51 4.01
87 88 1.462616 CCGATGAGGTCCAAATGCAA 58.537 50.000 0.00 0.00 34.51 4.08
88 89 1.031571 GCCGATGAGGTCCAAATGCA 61.032 55.000 0.00 0.00 43.70 3.96
89 90 1.031571 TGCCGATGAGGTCCAAATGC 61.032 55.000 0.00 0.00 43.70 3.56
90 91 1.462616 TTGCCGATGAGGTCCAAATG 58.537 50.000 0.00 0.00 43.70 2.32
91 92 2.428171 CAATTGCCGATGAGGTCCAAAT 59.572 45.455 0.00 0.00 43.70 2.32
92 93 1.818060 CAATTGCCGATGAGGTCCAAA 59.182 47.619 0.00 0.00 43.70 3.28
93 94 1.462616 CAATTGCCGATGAGGTCCAA 58.537 50.000 0.00 0.00 43.70 3.53
94 95 0.394216 CCAATTGCCGATGAGGTCCA 60.394 55.000 0.00 0.00 43.70 4.02
95 96 0.394352 ACCAATTGCCGATGAGGTCC 60.394 55.000 0.00 0.00 43.70 4.46
96 97 1.017387 GACCAATTGCCGATGAGGTC 58.983 55.000 0.00 0.00 43.70 3.85
97 98 0.620556 AGACCAATTGCCGATGAGGT 59.379 50.000 0.00 0.00 43.70 3.85
98 99 1.134280 AGAGACCAATTGCCGATGAGG 60.134 52.381 0.00 0.00 44.97 3.86
99 100 2.322355 AGAGACCAATTGCCGATGAG 57.678 50.000 0.00 0.00 0.00 2.90
100 101 2.027285 TCAAGAGACCAATTGCCGATGA 60.027 45.455 0.00 0.00 0.00 2.92
101 102 2.358957 TCAAGAGACCAATTGCCGATG 58.641 47.619 0.00 0.00 0.00 3.84
102 103 2.787473 TCAAGAGACCAATTGCCGAT 57.213 45.000 0.00 0.00 0.00 4.18
103 104 2.552315 GTTTCAAGAGACCAATTGCCGA 59.448 45.455 0.00 0.00 0.00 5.54
104 105 2.554032 AGTTTCAAGAGACCAATTGCCG 59.446 45.455 0.00 0.00 0.00 5.69
105 106 5.705609 TTAGTTTCAAGAGACCAATTGCC 57.294 39.130 0.00 0.00 0.00 4.52
106 107 6.503524 TGTTTAGTTTCAAGAGACCAATTGC 58.496 36.000 0.00 0.00 0.00 3.56
107 108 8.971321 CAATGTTTAGTTTCAAGAGACCAATTG 58.029 33.333 0.00 0.00 0.00 2.32
108 109 8.912988 TCAATGTTTAGTTTCAAGAGACCAATT 58.087 29.630 0.00 0.00 0.00 2.32
109 110 8.352942 GTCAATGTTTAGTTTCAAGAGACCAAT 58.647 33.333 0.00 0.00 0.00 3.16
110 111 7.466725 CGTCAATGTTTAGTTTCAAGAGACCAA 60.467 37.037 0.00 0.00 0.00 3.67
111 112 6.018262 CGTCAATGTTTAGTTTCAAGAGACCA 60.018 38.462 0.00 0.00 0.00 4.02
112 113 6.363473 CGTCAATGTTTAGTTTCAAGAGACC 58.637 40.000 0.00 0.00 0.00 3.85
113 114 5.846473 GCGTCAATGTTTAGTTTCAAGAGAC 59.154 40.000 0.00 0.00 0.00 3.36
114 115 5.758296 AGCGTCAATGTTTAGTTTCAAGAGA 59.242 36.000 0.00 0.00 0.00 3.10
115 116 5.990408 AGCGTCAATGTTTAGTTTCAAGAG 58.010 37.500 0.00 0.00 0.00 2.85
116 117 6.198687 CAAGCGTCAATGTTTAGTTTCAAGA 58.801 36.000 0.00 0.00 0.00 3.02
117 118 5.108254 GCAAGCGTCAATGTTTAGTTTCAAG 60.108 40.000 0.00 0.00 0.00 3.02
118 119 4.737765 GCAAGCGTCAATGTTTAGTTTCAA 59.262 37.500 0.00 0.00 0.00 2.69
119 120 4.036262 AGCAAGCGTCAATGTTTAGTTTCA 59.964 37.500 0.00 0.00 0.00 2.69
120 121 4.537015 AGCAAGCGTCAATGTTTAGTTTC 58.463 39.130 0.00 0.00 0.00 2.78
121 122 4.568152 AGCAAGCGTCAATGTTTAGTTT 57.432 36.364 0.00 0.00 0.00 2.66
122 123 4.568152 AAGCAAGCGTCAATGTTTAGTT 57.432 36.364 0.00 0.00 0.00 2.24
123 124 4.202010 ACAAAGCAAGCGTCAATGTTTAGT 60.202 37.500 0.00 0.00 0.00 2.24
124 125 4.290155 ACAAAGCAAGCGTCAATGTTTAG 58.710 39.130 0.00 0.00 0.00 1.85
125 126 4.300189 ACAAAGCAAGCGTCAATGTTTA 57.700 36.364 0.00 0.00 0.00 2.01
126 127 3.163630 ACAAAGCAAGCGTCAATGTTT 57.836 38.095 0.00 0.00 0.00 2.83
127 128 2.869233 ACAAAGCAAGCGTCAATGTT 57.131 40.000 0.00 0.00 0.00 2.71
128 129 2.869233 AACAAAGCAAGCGTCAATGT 57.131 40.000 0.00 0.00 0.00 2.71
129 130 4.032672 TCAAAAACAAAGCAAGCGTCAATG 59.967 37.500 0.00 0.00 0.00 2.82
130 131 4.180057 TCAAAAACAAAGCAAGCGTCAAT 58.820 34.783 0.00 0.00 0.00 2.57
131 132 3.579709 TCAAAAACAAAGCAAGCGTCAA 58.420 36.364 0.00 0.00 0.00 3.18
132 133 3.223423 TCAAAAACAAAGCAAGCGTCA 57.777 38.095 0.00 0.00 0.00 4.35
133 134 4.737765 TGTATCAAAAACAAAGCAAGCGTC 59.262 37.500 0.00 0.00 0.00 5.19
134 135 4.677584 TGTATCAAAAACAAAGCAAGCGT 58.322 34.783 0.00 0.00 0.00 5.07
135 136 4.148696 CCTGTATCAAAAACAAAGCAAGCG 59.851 41.667 0.00 0.00 0.00 4.68
136 137 5.175673 GTCCTGTATCAAAAACAAAGCAAGC 59.824 40.000 0.00 0.00 0.00 4.01
137 138 6.272318 TGTCCTGTATCAAAAACAAAGCAAG 58.728 36.000 0.00 0.00 0.00 4.01
138 139 6.214191 TGTCCTGTATCAAAAACAAAGCAA 57.786 33.333 0.00 0.00 0.00 3.91
139 140 5.843673 TGTCCTGTATCAAAAACAAAGCA 57.156 34.783 0.00 0.00 0.00 3.91
140 141 5.175673 GCTTGTCCTGTATCAAAAACAAAGC 59.824 40.000 0.00 0.00 32.79 3.51
141 142 6.507023 AGCTTGTCCTGTATCAAAAACAAAG 58.493 36.000 0.00 0.00 0.00 2.77
142 143 6.463995 AGCTTGTCCTGTATCAAAAACAAA 57.536 33.333 0.00 0.00 0.00 2.83
143 144 6.770785 AGTAGCTTGTCCTGTATCAAAAACAA 59.229 34.615 0.00 0.00 0.00 2.83
144 145 6.204688 CAGTAGCTTGTCCTGTATCAAAAACA 59.795 38.462 0.00 0.00 0.00 2.83
145 146 6.204882 ACAGTAGCTTGTCCTGTATCAAAAAC 59.795 38.462 0.00 0.00 37.66 2.43
146 147 6.296026 ACAGTAGCTTGTCCTGTATCAAAAA 58.704 36.000 0.00 0.00 37.66 1.94
147 148 5.865085 ACAGTAGCTTGTCCTGTATCAAAA 58.135 37.500 0.00 0.00 37.66 2.44
148 149 5.483685 ACAGTAGCTTGTCCTGTATCAAA 57.516 39.130 0.00 0.00 37.66 2.69
149 150 5.237815 CAACAGTAGCTTGTCCTGTATCAA 58.762 41.667 0.00 0.00 38.44 2.57
150 151 4.322725 CCAACAGTAGCTTGTCCTGTATCA 60.323 45.833 0.00 0.00 38.44 2.15
151 152 4.081642 TCCAACAGTAGCTTGTCCTGTATC 60.082 45.833 0.00 0.00 38.44 2.24
152 153 3.838317 TCCAACAGTAGCTTGTCCTGTAT 59.162 43.478 0.00 0.00 38.44 2.29
153 154 3.236047 TCCAACAGTAGCTTGTCCTGTA 58.764 45.455 0.00 0.00 38.44 2.74
154 155 2.037772 CTCCAACAGTAGCTTGTCCTGT 59.962 50.000 0.00 0.00 41.01 4.00
155 156 2.693069 CTCCAACAGTAGCTTGTCCTG 58.307 52.381 0.00 0.00 0.00 3.86
156 157 1.002544 GCTCCAACAGTAGCTTGTCCT 59.997 52.381 0.00 0.00 35.80 3.85
157 158 1.002544 AGCTCCAACAGTAGCTTGTCC 59.997 52.381 0.00 0.00 46.82 4.02
158 159 2.072298 CAGCTCCAACAGTAGCTTGTC 58.928 52.381 0.00 0.00 46.82 3.18
159 160 1.417890 ACAGCTCCAACAGTAGCTTGT 59.582 47.619 0.00 0.00 46.82 3.16
160 161 1.802960 CACAGCTCCAACAGTAGCTTG 59.197 52.381 0.00 0.00 46.82 4.01
161 162 1.694150 TCACAGCTCCAACAGTAGCTT 59.306 47.619 0.00 0.00 46.82 3.74
163 164 2.393271 ATCACAGCTCCAACAGTAGC 57.607 50.000 0.00 0.00 39.08 3.58
164 165 5.330455 TCTAATCACAGCTCCAACAGTAG 57.670 43.478 0.00 0.00 0.00 2.57
165 166 5.738619 TTCTAATCACAGCTCCAACAGTA 57.261 39.130 0.00 0.00 0.00 2.74
166 167 4.623932 TTCTAATCACAGCTCCAACAGT 57.376 40.909 0.00 0.00 0.00 3.55
167 168 5.645067 TGATTTCTAATCACAGCTCCAACAG 59.355 40.000 0.00 0.00 0.00 3.16
168 169 5.412594 GTGATTTCTAATCACAGCTCCAACA 59.587 40.000 21.49 0.00 45.61 3.33
169 170 5.873732 GTGATTTCTAATCACAGCTCCAAC 58.126 41.667 21.49 0.00 45.61 3.77
178 179 6.410540 ACTCTCCTTGGTGATTTCTAATCAC 58.589 40.000 19.32 19.32 45.59 3.06
179 180 6.627087 ACTCTCCTTGGTGATTTCTAATCA 57.373 37.500 0.00 0.00 0.00 2.57
180 181 6.881602 ACAACTCTCCTTGGTGATTTCTAATC 59.118 38.462 0.00 0.00 0.00 1.75
181 182 6.784031 ACAACTCTCCTTGGTGATTTCTAAT 58.216 36.000 0.00 0.00 0.00 1.73
182 183 6.187727 ACAACTCTCCTTGGTGATTTCTAA 57.812 37.500 0.00 0.00 0.00 2.10
183 184 5.825593 ACAACTCTCCTTGGTGATTTCTA 57.174 39.130 0.00 0.00 0.00 2.10
184 185 4.713792 ACAACTCTCCTTGGTGATTTCT 57.286 40.909 0.00 0.00 0.00 2.52
185 186 5.066593 AGAACAACTCTCCTTGGTGATTTC 58.933 41.667 0.00 0.00 0.00 2.17
186 187 5.053978 AGAACAACTCTCCTTGGTGATTT 57.946 39.130 0.00 0.00 0.00 2.17
187 188 4.713792 AGAACAACTCTCCTTGGTGATT 57.286 40.909 0.00 0.00 0.00 2.57
188 189 4.713792 AAGAACAACTCTCCTTGGTGAT 57.286 40.909 0.00 0.00 31.02 3.06
189 190 4.080582 TGAAAGAACAACTCTCCTTGGTGA 60.081 41.667 0.00 0.00 31.02 4.02
190 191 4.199310 TGAAAGAACAACTCTCCTTGGTG 58.801 43.478 0.00 0.00 31.02 4.17
191 192 4.503714 TGAAAGAACAACTCTCCTTGGT 57.496 40.909 0.00 0.00 31.02 3.67
192 193 5.221126 CCTTTGAAAGAACAACTCTCCTTGG 60.221 44.000 6.49 0.00 31.02 3.61
193 194 5.358160 ACCTTTGAAAGAACAACTCTCCTTG 59.642 40.000 6.49 0.00 31.02 3.61
194 195 5.358160 CACCTTTGAAAGAACAACTCTCCTT 59.642 40.000 6.49 0.00 31.02 3.36
195 196 4.884164 CACCTTTGAAAGAACAACTCTCCT 59.116 41.667 6.49 0.00 31.02 3.69
196 197 4.036852 CCACCTTTGAAAGAACAACTCTCC 59.963 45.833 6.49 0.00 31.02 3.71
197 198 4.881850 TCCACCTTTGAAAGAACAACTCTC 59.118 41.667 6.49 0.00 31.02 3.20
198 199 4.640647 GTCCACCTTTGAAAGAACAACTCT 59.359 41.667 6.49 0.00 35.13 3.24
199 200 4.398044 TGTCCACCTTTGAAAGAACAACTC 59.602 41.667 6.49 0.00 0.00 3.01
200 201 4.340617 TGTCCACCTTTGAAAGAACAACT 58.659 39.130 6.49 0.00 0.00 3.16
201 202 4.157840 ACTGTCCACCTTTGAAAGAACAAC 59.842 41.667 6.49 0.64 0.00 3.32
202 203 4.340617 ACTGTCCACCTTTGAAAGAACAA 58.659 39.130 6.49 0.00 0.00 2.83
203 204 3.963129 ACTGTCCACCTTTGAAAGAACA 58.037 40.909 6.49 4.70 0.00 3.18
204 205 4.495844 CGAACTGTCCACCTTTGAAAGAAC 60.496 45.833 6.49 0.30 0.00 3.01
205 206 3.625764 CGAACTGTCCACCTTTGAAAGAA 59.374 43.478 6.49 0.00 0.00 2.52
206 207 3.202906 CGAACTGTCCACCTTTGAAAGA 58.797 45.455 6.49 0.00 0.00 2.52
207 208 2.287009 GCGAACTGTCCACCTTTGAAAG 60.287 50.000 0.00 0.00 0.00 2.62
208 209 1.673920 GCGAACTGTCCACCTTTGAAA 59.326 47.619 0.00 0.00 0.00 2.69
209 210 1.305201 GCGAACTGTCCACCTTTGAA 58.695 50.000 0.00 0.00 0.00 2.69
210 211 0.534203 GGCGAACTGTCCACCTTTGA 60.534 55.000 0.00 0.00 0.00 2.69
211 212 0.535102 AGGCGAACTGTCCACCTTTG 60.535 55.000 0.00 0.00 0.00 2.77
212 213 0.250338 GAGGCGAACTGTCCACCTTT 60.250 55.000 0.00 0.00 29.00 3.11
213 214 1.371558 GAGGCGAACTGTCCACCTT 59.628 57.895 0.00 0.00 29.00 3.50
214 215 2.584391 GGAGGCGAACTGTCCACCT 61.584 63.158 0.00 0.00 31.46 4.00
215 216 2.047179 GGAGGCGAACTGTCCACC 60.047 66.667 0.00 0.00 0.00 4.61
216 217 2.047179 GGGAGGCGAACTGTCCAC 60.047 66.667 0.00 0.00 31.31 4.02
217 218 3.319198 GGGGAGGCGAACTGTCCA 61.319 66.667 0.00 0.00 31.31 4.02
218 219 4.452733 CGGGGAGGCGAACTGTCC 62.453 72.222 0.00 0.00 0.00 4.02
219 220 1.880819 TTACGGGGAGGCGAACTGTC 61.881 60.000 0.00 0.00 0.00 3.51
220 221 1.262640 ATTACGGGGAGGCGAACTGT 61.263 55.000 0.00 0.00 0.00 3.55
221 222 0.810031 CATTACGGGGAGGCGAACTG 60.810 60.000 0.00 0.00 0.00 3.16
222 223 0.974010 TCATTACGGGGAGGCGAACT 60.974 55.000 0.00 0.00 0.00 3.01
223 224 0.808847 GTCATTACGGGGAGGCGAAC 60.809 60.000 0.00 0.00 0.00 3.95
224 225 1.518774 GTCATTACGGGGAGGCGAA 59.481 57.895 0.00 0.00 0.00 4.70
225 226 2.777972 CGTCATTACGGGGAGGCGA 61.778 63.158 0.00 0.00 45.50 5.54
226 227 2.279252 CGTCATTACGGGGAGGCG 60.279 66.667 0.00 0.00 45.50 5.52
235 236 4.527564 GTTGGAATATGCAGCGTCATTAC 58.472 43.478 0.00 0.00 0.00 1.89
236 237 3.563808 GGTTGGAATATGCAGCGTCATTA 59.436 43.478 0.00 0.00 0.00 1.90
237 238 2.358898 GGTTGGAATATGCAGCGTCATT 59.641 45.455 0.00 0.00 0.00 2.57
238 239 1.949525 GGTTGGAATATGCAGCGTCAT 59.050 47.619 0.00 0.00 0.00 3.06
239 240 1.065491 AGGTTGGAATATGCAGCGTCA 60.065 47.619 0.00 0.00 0.00 4.35
240 241 1.668419 AGGTTGGAATATGCAGCGTC 58.332 50.000 0.00 0.00 0.00 5.19
241 242 3.403038 GATAGGTTGGAATATGCAGCGT 58.597 45.455 0.00 0.00 0.00 5.07
242 243 2.744202 GGATAGGTTGGAATATGCAGCG 59.256 50.000 0.00 0.00 0.00 5.18
243 244 3.754965 TGGATAGGTTGGAATATGCAGC 58.245 45.455 0.00 0.00 0.00 5.25
244 245 5.380043 ACTTGGATAGGTTGGAATATGCAG 58.620 41.667 0.00 0.00 32.34 4.41
245 246 5.387113 ACTTGGATAGGTTGGAATATGCA 57.613 39.130 0.00 0.00 0.00 3.96
246 247 6.076981 CAACTTGGATAGGTTGGAATATGC 57.923 41.667 0.00 0.00 39.08 3.14
262 263 4.272489 TGGAAGAATGCTATCCAACTTGG 58.728 43.478 0.74 0.74 40.19 3.61
263 264 5.902613 TTGGAAGAATGCTATCCAACTTG 57.097 39.130 11.34 0.00 45.71 3.16
268 269 9.866655 AAATATACTTTGGAAGAATGCTATCCA 57.133 29.630 1.58 1.58 41.36 3.41
279 280 9.252962 GGATGCAAATCAAATATACTTTGGAAG 57.747 33.333 0.00 0.00 33.60 3.46
280 281 8.980596 AGGATGCAAATCAAATATACTTTGGAA 58.019 29.630 0.00 0.00 33.60 3.53
281 282 8.415553 CAGGATGCAAATCAAATATACTTTGGA 58.584 33.333 0.00 0.00 34.24 3.53
282 283 8.415553 TCAGGATGCAAATCAAATATACTTTGG 58.584 33.333 0.00 0.00 34.76 3.28
283 284 9.459640 CTCAGGATGCAAATCAAATATACTTTG 57.540 33.333 0.00 0.00 34.76 2.77
284 285 9.412460 TCTCAGGATGCAAATCAAATATACTTT 57.588 29.630 0.00 0.00 34.76 2.66
285 286 8.985315 TCTCAGGATGCAAATCAAATATACTT 57.015 30.769 0.00 0.00 34.76 2.24
286 287 8.985315 TTCTCAGGATGCAAATCAAATATACT 57.015 30.769 0.00 0.00 34.76 2.12
287 288 8.295288 CCTTCTCAGGATGCAAATCAAATATAC 58.705 37.037 0.00 0.00 44.19 1.47
288 289 7.040201 GCCTTCTCAGGATGCAAATCAAATATA 60.040 37.037 0.00 0.00 44.19 0.86
289 290 6.239232 GCCTTCTCAGGATGCAAATCAAATAT 60.239 38.462 0.00 0.00 44.19 1.28
290 291 5.068198 GCCTTCTCAGGATGCAAATCAAATA 59.932 40.000 0.00 0.00 44.19 1.40
291 292 4.142004 GCCTTCTCAGGATGCAAATCAAAT 60.142 41.667 0.00 0.00 44.19 2.32
292 293 3.194116 GCCTTCTCAGGATGCAAATCAAA 59.806 43.478 0.00 0.00 44.19 2.69
293 294 2.756760 GCCTTCTCAGGATGCAAATCAA 59.243 45.455 0.00 0.00 44.19 2.57
294 295 2.025605 AGCCTTCTCAGGATGCAAATCA 60.026 45.455 0.00 0.00 44.19 2.57
295 296 2.617774 GAGCCTTCTCAGGATGCAAATC 59.382 50.000 0.00 0.00 39.72 2.17
296 297 2.652590 GAGCCTTCTCAGGATGCAAAT 58.347 47.619 0.00 0.00 39.72 2.32
297 298 1.340405 GGAGCCTTCTCAGGATGCAAA 60.340 52.381 0.00 0.00 46.01 3.68
298 299 0.254178 GGAGCCTTCTCAGGATGCAA 59.746 55.000 0.00 0.00 46.01 4.08
299 300 1.910722 GGAGCCTTCTCAGGATGCA 59.089 57.895 0.00 0.00 46.01 3.96
300 301 1.148048 GGGAGCCTTCTCAGGATGC 59.852 63.158 0.00 0.00 46.01 3.91
301 302 0.758123 GAGGGAGCCTTCTCAGGATG 59.242 60.000 0.00 0.00 39.72 3.51
302 303 0.399806 GGAGGGAGCCTTCTCAGGAT 60.400 60.000 0.00 0.00 43.67 3.24
303 304 1.002274 GGAGGGAGCCTTCTCAGGA 59.998 63.158 0.00 0.00 44.19 3.86
304 305 2.069430 GGGAGGGAGCCTTCTCAGG 61.069 68.421 0.00 0.00 44.28 3.86
305 306 2.069430 GGGGAGGGAGCCTTCTCAG 61.069 68.421 0.70 0.00 41.13 3.35
306 307 2.041265 GGGGAGGGAGCCTTCTCA 59.959 66.667 0.70 0.00 41.13 3.27
307 308 2.069430 CAGGGGAGGGAGCCTTCTC 61.069 68.421 0.00 0.00 38.62 2.87
308 309 1.907470 ATCAGGGGAGGGAGCCTTCT 61.907 60.000 0.00 0.00 31.76 2.85
309 310 1.385206 ATCAGGGGAGGGAGCCTTC 60.385 63.158 0.00 0.00 31.76 3.46
310 311 1.695597 CATCAGGGGAGGGAGCCTT 60.696 63.158 0.00 0.00 31.76 4.35
311 312 2.040043 CATCAGGGGAGGGAGCCT 60.040 66.667 0.00 0.00 36.03 4.58
317 318 1.133976 CAGTAAAGCCATCAGGGGAGG 60.134 57.143 0.00 0.00 37.04 4.30
318 319 1.748591 GCAGTAAAGCCATCAGGGGAG 60.749 57.143 0.00 0.00 37.04 4.30
319 320 0.255890 GCAGTAAAGCCATCAGGGGA 59.744 55.000 0.00 0.00 37.04 4.81
320 321 0.034186 TGCAGTAAAGCCATCAGGGG 60.034 55.000 0.00 0.00 37.04 4.79
321 322 1.098050 GTGCAGTAAAGCCATCAGGG 58.902 55.000 0.00 0.00 40.85 4.45
322 323 1.825090 TGTGCAGTAAAGCCATCAGG 58.175 50.000 0.00 0.00 38.23 3.86
323 324 4.157289 AGAAATGTGCAGTAAAGCCATCAG 59.843 41.667 0.00 0.00 0.00 2.90
324 325 4.081406 AGAAATGTGCAGTAAAGCCATCA 58.919 39.130 0.00 0.00 0.00 3.07
325 326 4.708726 AGAAATGTGCAGTAAAGCCATC 57.291 40.909 0.00 0.00 0.00 3.51
326 327 4.523943 TGAAGAAATGTGCAGTAAAGCCAT 59.476 37.500 0.00 0.00 0.00 4.40
327 328 3.888323 TGAAGAAATGTGCAGTAAAGCCA 59.112 39.130 0.00 0.00 0.00 4.75
328 329 4.216257 TCTGAAGAAATGTGCAGTAAAGCC 59.784 41.667 0.00 0.00 0.00 4.35
329 330 5.362556 TCTGAAGAAATGTGCAGTAAAGC 57.637 39.130 0.00 0.00 0.00 3.51
330 331 7.420800 AGTTTCTGAAGAAATGTGCAGTAAAG 58.579 34.615 8.64 0.00 44.69 1.85
331 332 7.333528 AGTTTCTGAAGAAATGTGCAGTAAA 57.666 32.000 8.64 0.00 44.69 2.01
332 333 6.942532 AGTTTCTGAAGAAATGTGCAGTAA 57.057 33.333 8.64 0.00 44.69 2.24
333 334 7.171508 CAGTAGTTTCTGAAGAAATGTGCAGTA 59.828 37.037 8.64 0.00 44.69 2.74
334 335 6.017605 CAGTAGTTTCTGAAGAAATGTGCAGT 60.018 38.462 8.64 0.00 44.69 4.40
335 336 6.369005 CAGTAGTTTCTGAAGAAATGTGCAG 58.631 40.000 8.64 0.00 44.69 4.41
336 337 5.239306 CCAGTAGTTTCTGAAGAAATGTGCA 59.761 40.000 8.64 0.00 44.69 4.57
337 338 5.335191 CCCAGTAGTTTCTGAAGAAATGTGC 60.335 44.000 8.64 4.08 44.69 4.57
338 339 5.997746 TCCCAGTAGTTTCTGAAGAAATGTG 59.002 40.000 8.64 4.81 44.69 3.21
339 340 5.998363 GTCCCAGTAGTTTCTGAAGAAATGT 59.002 40.000 8.64 3.05 44.69 2.71
340 341 5.412904 GGTCCCAGTAGTTTCTGAAGAAATG 59.587 44.000 8.64 3.55 44.69 2.32
341 342 5.310857 AGGTCCCAGTAGTTTCTGAAGAAAT 59.689 40.000 8.64 2.03 44.69 2.17
342 343 4.658901 AGGTCCCAGTAGTTTCTGAAGAAA 59.341 41.667 1.31 1.31 41.29 2.52
343 344 4.040461 CAGGTCCCAGTAGTTTCTGAAGAA 59.960 45.833 0.00 0.00 37.61 2.52
344 345 3.578716 CAGGTCCCAGTAGTTTCTGAAGA 59.421 47.826 0.00 0.00 37.61 2.87
345 346 3.866449 GCAGGTCCCAGTAGTTTCTGAAG 60.866 52.174 0.00 0.00 37.61 3.02
346 347 2.038557 GCAGGTCCCAGTAGTTTCTGAA 59.961 50.000 0.00 0.00 37.61 3.02
347 348 1.623811 GCAGGTCCCAGTAGTTTCTGA 59.376 52.381 0.00 0.00 37.61 3.27
348 349 1.625818 AGCAGGTCCCAGTAGTTTCTG 59.374 52.381 0.00 0.00 35.45 3.02
349 350 1.625818 CAGCAGGTCCCAGTAGTTTCT 59.374 52.381 0.00 0.00 0.00 2.52
350 351 1.623811 TCAGCAGGTCCCAGTAGTTTC 59.376 52.381 0.00 0.00 0.00 2.78
351 352 1.729586 TCAGCAGGTCCCAGTAGTTT 58.270 50.000 0.00 0.00 0.00 2.66
352 353 1.729586 TTCAGCAGGTCCCAGTAGTT 58.270 50.000 0.00 0.00 0.00 2.24
353 354 1.348036 GTTTCAGCAGGTCCCAGTAGT 59.652 52.381 0.00 0.00 0.00 2.73
354 355 1.339151 GGTTTCAGCAGGTCCCAGTAG 60.339 57.143 0.00 0.00 0.00 2.57
355 356 0.690762 GGTTTCAGCAGGTCCCAGTA 59.309 55.000 0.00 0.00 0.00 2.74
356 357 1.062488 AGGTTTCAGCAGGTCCCAGT 61.062 55.000 0.00 0.00 0.00 4.00
357 358 0.607489 CAGGTTTCAGCAGGTCCCAG 60.607 60.000 0.00 0.00 0.00 4.45
358 359 1.059584 TCAGGTTTCAGCAGGTCCCA 61.060 55.000 0.00 0.00 0.00 4.37
359 360 0.606673 GTCAGGTTTCAGCAGGTCCC 60.607 60.000 0.00 0.00 0.00 4.46
360 361 0.108585 TGTCAGGTTTCAGCAGGTCC 59.891 55.000 0.00 0.00 0.00 4.46
361 362 2.079925 GATGTCAGGTTTCAGCAGGTC 58.920 52.381 0.00 0.00 0.00 3.85
362 363 1.421268 TGATGTCAGGTTTCAGCAGGT 59.579 47.619 0.00 0.00 0.00 4.00
363 364 2.189594 TGATGTCAGGTTTCAGCAGG 57.810 50.000 0.00 0.00 0.00 4.85
364 365 2.159421 GCATGATGTCAGGTTTCAGCAG 60.159 50.000 0.00 0.00 33.61 4.24
365 366 1.814394 GCATGATGTCAGGTTTCAGCA 59.186 47.619 0.00 0.00 34.57 4.41
366 367 1.133790 GGCATGATGTCAGGTTTCAGC 59.866 52.381 0.00 0.00 0.00 4.26
367 368 2.422479 CAGGCATGATGTCAGGTTTCAG 59.578 50.000 0.00 0.00 0.00 3.02
368 369 2.439409 CAGGCATGATGTCAGGTTTCA 58.561 47.619 0.00 0.00 0.00 2.69
369 370 1.133790 GCAGGCATGATGTCAGGTTTC 59.866 52.381 0.62 0.00 0.00 2.78
370 371 1.180029 GCAGGCATGATGTCAGGTTT 58.820 50.000 0.62 0.00 0.00 3.27
371 372 0.038599 TGCAGGCATGATGTCAGGTT 59.961 50.000 0.62 0.00 0.00 3.50
372 373 0.257905 ATGCAGGCATGATGTCAGGT 59.742 50.000 0.62 0.00 35.03 4.00
373 374 1.337071 GAATGCAGGCATGATGTCAGG 59.663 52.381 7.64 0.00 36.68 3.86
374 375 1.337071 GGAATGCAGGCATGATGTCAG 59.663 52.381 7.64 0.00 36.68 3.51
375 376 1.395635 GGAATGCAGGCATGATGTCA 58.604 50.000 7.64 0.00 36.68 3.58
376 377 0.672342 GGGAATGCAGGCATGATGTC 59.328 55.000 7.64 1.46 36.68 3.06
377 378 0.032912 TGGGAATGCAGGCATGATGT 60.033 50.000 7.64 0.00 36.68 3.06
378 379 0.387929 GTGGGAATGCAGGCATGATG 59.612 55.000 7.64 0.00 36.68 3.07
379 380 0.032912 TGTGGGAATGCAGGCATGAT 60.033 50.000 7.64 0.00 36.68 2.45
380 381 0.966875 GTGTGGGAATGCAGGCATGA 60.967 55.000 7.64 0.00 36.68 3.07
381 382 0.968901 AGTGTGGGAATGCAGGCATG 60.969 55.000 7.64 0.00 36.68 4.06
382 383 0.251922 AAGTGTGGGAATGCAGGCAT 60.252 50.000 0.00 0.00 38.46 4.40
383 384 0.895100 GAAGTGTGGGAATGCAGGCA 60.895 55.000 0.00 0.00 0.00 4.75
384 385 1.598701 GGAAGTGTGGGAATGCAGGC 61.599 60.000 0.00 0.00 0.00 4.85
385 386 0.251297 TGGAAGTGTGGGAATGCAGG 60.251 55.000 0.00 0.00 0.00 4.85
386 387 1.619654 TTGGAAGTGTGGGAATGCAG 58.380 50.000 0.00 0.00 0.00 4.41
387 388 2.079170 TTTGGAAGTGTGGGAATGCA 57.921 45.000 0.00 0.00 0.00 3.96
388 389 3.259123 AGAATTTGGAAGTGTGGGAATGC 59.741 43.478 0.00 0.00 0.00 3.56
389 390 4.523943 TCAGAATTTGGAAGTGTGGGAATG 59.476 41.667 0.00 0.00 0.00 2.67
390 391 4.739793 TCAGAATTTGGAAGTGTGGGAAT 58.260 39.130 0.00 0.00 0.00 3.01
391 392 4.177537 TCAGAATTTGGAAGTGTGGGAA 57.822 40.909 0.00 0.00 0.00 3.97
392 393 3.874383 TCAGAATTTGGAAGTGTGGGA 57.126 42.857 0.00 0.00 0.00 4.37
393 394 3.891366 AGTTCAGAATTTGGAAGTGTGGG 59.109 43.478 0.00 0.00 0.00 4.61
394 395 4.022849 GGAGTTCAGAATTTGGAAGTGTGG 60.023 45.833 5.42 0.00 0.00 4.17
395 396 4.022849 GGGAGTTCAGAATTTGGAAGTGTG 60.023 45.833 5.42 0.00 0.00 3.82
396 397 4.145052 GGGAGTTCAGAATTTGGAAGTGT 58.855 43.478 5.42 0.00 0.00 3.55
397 398 4.144297 TGGGAGTTCAGAATTTGGAAGTG 58.856 43.478 5.42 0.00 0.00 3.16
398 399 4.104738 TCTGGGAGTTCAGAATTTGGAAGT 59.895 41.667 0.00 1.33 40.43 3.01
399 400 4.655963 TCTGGGAGTTCAGAATTTGGAAG 58.344 43.478 0.00 0.00 40.43 3.46
400 401 4.722526 TCTGGGAGTTCAGAATTTGGAA 57.277 40.909 0.00 0.00 40.43 3.53
401 402 4.722526 TTCTGGGAGTTCAGAATTTGGA 57.277 40.909 3.50 0.00 45.53 3.53
408 409 1.722034 ACAGCTTCTGGGAGTTCAGA 58.278 50.000 0.00 0.00 41.51 3.27
409 410 2.421619 GAACAGCTTCTGGGAGTTCAG 58.578 52.381 6.09 0.00 38.66 3.02
410 411 1.072331 GGAACAGCTTCTGGGAGTTCA 59.928 52.381 11.54 0.00 40.11 3.18
411 412 1.349357 AGGAACAGCTTCTGGGAGTTC 59.651 52.381 2.98 2.98 38.22 3.01
412 413 1.439543 AGGAACAGCTTCTGGGAGTT 58.560 50.000 0.00 0.00 35.51 3.01
413 414 1.349357 GAAGGAACAGCTTCTGGGAGT 59.651 52.381 0.00 0.00 35.51 3.85
414 415 1.627834 AGAAGGAACAGCTTCTGGGAG 59.372 52.381 0.00 0.00 38.36 4.30
415 416 1.734655 AGAAGGAACAGCTTCTGGGA 58.265 50.000 0.00 0.00 38.36 4.37
416 417 2.575805 AAGAAGGAACAGCTTCTGGG 57.424 50.000 0.00 0.00 39.55 4.45
417 418 4.397417 CCATAAAGAAGGAACAGCTTCTGG 59.603 45.833 0.00 0.00 39.55 3.86
418 419 5.006386 ACCATAAAGAAGGAACAGCTTCTG 58.994 41.667 0.00 0.00 39.55 3.02
419 420 5.006386 CACCATAAAGAAGGAACAGCTTCT 58.994 41.667 0.00 0.00 41.17 2.85
420 421 4.379918 GCACCATAAAGAAGGAACAGCTTC 60.380 45.833 0.00 0.00 0.00 3.86
421 422 3.507622 GCACCATAAAGAAGGAACAGCTT 59.492 43.478 0.00 0.00 0.00 3.74
422 423 3.084786 GCACCATAAAGAAGGAACAGCT 58.915 45.455 0.00 0.00 0.00 4.24
423 424 2.164422 GGCACCATAAAGAAGGAACAGC 59.836 50.000 0.00 0.00 0.00 4.40
424 425 3.191371 GTGGCACCATAAAGAAGGAACAG 59.809 47.826 6.29 0.00 0.00 3.16
425 426 3.153919 GTGGCACCATAAAGAAGGAACA 58.846 45.455 6.29 0.00 0.00 3.18
426 427 2.492088 GGTGGCACCATAAAGAAGGAAC 59.508 50.000 31.26 0.00 38.42 3.62
427 428 2.109128 TGGTGGCACCATAAAGAAGGAA 59.891 45.455 34.67 8.11 44.79 3.36
428 429 1.707989 TGGTGGCACCATAAAGAAGGA 59.292 47.619 34.67 8.68 44.79 3.36
429 430 2.214376 TGGTGGCACCATAAAGAAGG 57.786 50.000 34.67 0.00 44.79 3.46
439 440 0.916809 AGTAGGGTAATGGTGGCACC 59.083 55.000 29.75 29.75 39.22 5.01
440 441 2.017113 GCAGTAGGGTAATGGTGGCAC 61.017 57.143 9.70 9.70 0.00 5.01
441 442 0.254747 GCAGTAGGGTAATGGTGGCA 59.745 55.000 0.00 0.00 0.00 4.92
442 443 0.465642 GGCAGTAGGGTAATGGTGGC 60.466 60.000 0.00 0.00 0.00 5.01
443 444 0.179056 CGGCAGTAGGGTAATGGTGG 60.179 60.000 0.00 0.00 0.00 4.61
444 445 0.828022 TCGGCAGTAGGGTAATGGTG 59.172 55.000 0.00 0.00 0.00 4.17
445 446 1.575419 TTCGGCAGTAGGGTAATGGT 58.425 50.000 0.00 0.00 0.00 3.55
446 447 2.285977 GTTTCGGCAGTAGGGTAATGG 58.714 52.381 0.00 0.00 0.00 3.16
447 448 2.676342 GTGTTTCGGCAGTAGGGTAATG 59.324 50.000 0.00 0.00 0.00 1.90
448 449 2.675889 CGTGTTTCGGCAGTAGGGTAAT 60.676 50.000 0.00 0.00 35.71 1.89
449 450 1.337074 CGTGTTTCGGCAGTAGGGTAA 60.337 52.381 0.00 0.00 35.71 2.85
450 451 0.244450 CGTGTTTCGGCAGTAGGGTA 59.756 55.000 0.00 0.00 35.71 3.69
451 452 1.005394 CGTGTTTCGGCAGTAGGGT 60.005 57.895 0.00 0.00 35.71 4.34
452 453 0.601841 AACGTGTTTCGGCAGTAGGG 60.602 55.000 0.00 0.00 44.69 3.53
453 454 0.511221 CAACGTGTTTCGGCAGTAGG 59.489 55.000 0.00 0.00 44.69 3.18
454 455 0.511221 CCAACGTGTTTCGGCAGTAG 59.489 55.000 0.00 0.00 44.69 2.57
455 456 0.104487 TCCAACGTGTTTCGGCAGTA 59.896 50.000 0.00 0.00 44.69 2.74
456 457 1.153329 TCCAACGTGTTTCGGCAGT 60.153 52.632 0.00 0.00 44.69 4.40
457 458 1.569493 CTCCAACGTGTTTCGGCAG 59.431 57.895 0.00 0.00 44.69 4.85
458 459 2.539338 GCTCCAACGTGTTTCGGCA 61.539 57.895 0.00 0.00 44.69 5.69
459 460 0.947180 TAGCTCCAACGTGTTTCGGC 60.947 55.000 0.00 0.00 44.69 5.54
460 461 1.193874 GTTAGCTCCAACGTGTTTCGG 59.806 52.381 0.00 0.00 44.69 4.30
461 462 1.862201 TGTTAGCTCCAACGTGTTTCG 59.138 47.619 0.00 0.00 46.00 3.46
462 463 3.955771 TTGTTAGCTCCAACGTGTTTC 57.044 42.857 0.00 0.00 0.00 2.78
463 464 3.440872 TGTTTGTTAGCTCCAACGTGTTT 59.559 39.130 0.00 0.00 0.00 2.83
464 465 3.011119 TGTTTGTTAGCTCCAACGTGTT 58.989 40.909 0.00 0.00 0.00 3.32
465 466 2.634600 TGTTTGTTAGCTCCAACGTGT 58.365 42.857 0.00 0.00 0.00 4.49
466 467 3.249799 TGATGTTTGTTAGCTCCAACGTG 59.750 43.478 0.00 0.00 0.00 4.49
467 468 3.472652 TGATGTTTGTTAGCTCCAACGT 58.527 40.909 0.00 0.00 0.00 3.99
468 469 3.120199 CCTGATGTTTGTTAGCTCCAACG 60.120 47.826 0.00 0.00 0.00 4.10
469 470 4.072131 TCCTGATGTTTGTTAGCTCCAAC 58.928 43.478 0.00 0.00 0.00 3.77
470 471 4.072131 GTCCTGATGTTTGTTAGCTCCAA 58.928 43.478 0.00 0.00 0.00 3.53
471 472 3.327757 AGTCCTGATGTTTGTTAGCTCCA 59.672 43.478 0.00 0.00 0.00 3.86
472 473 3.944087 AGTCCTGATGTTTGTTAGCTCC 58.056 45.455 0.00 0.00 0.00 4.70
473 474 5.948992 AAAGTCCTGATGTTTGTTAGCTC 57.051 39.130 0.00 0.00 0.00 4.09
474 475 7.255486 GGTTTAAAGTCCTGATGTTTGTTAGCT 60.255 37.037 0.00 0.00 0.00 3.32
475 476 6.861572 GGTTTAAAGTCCTGATGTTTGTTAGC 59.138 38.462 0.00 0.00 0.00 3.09
476 477 8.166422 AGGTTTAAAGTCCTGATGTTTGTTAG 57.834 34.615 0.00 0.00 32.29 2.34
477 478 9.802039 ATAGGTTTAAAGTCCTGATGTTTGTTA 57.198 29.630 7.47 0.00 35.51 2.41
478 479 8.706322 ATAGGTTTAAAGTCCTGATGTTTGTT 57.294 30.769 7.47 0.00 35.51 2.83
479 480 8.706322 AATAGGTTTAAAGTCCTGATGTTTGT 57.294 30.769 7.47 0.00 35.51 2.83
481 482 8.957466 GCTAATAGGTTTAAAGTCCTGATGTTT 58.043 33.333 7.47 0.00 35.51 2.83
482 483 7.556635 GGCTAATAGGTTTAAAGTCCTGATGTT 59.443 37.037 7.47 1.77 35.51 2.71
483 484 7.054751 GGCTAATAGGTTTAAAGTCCTGATGT 58.945 38.462 7.47 0.00 35.51 3.06
484 485 7.283329 AGGCTAATAGGTTTAAAGTCCTGATG 58.717 38.462 7.47 0.00 35.51 3.07
485 486 7.453141 AGGCTAATAGGTTTAAAGTCCTGAT 57.547 36.000 7.47 0.39 35.51 2.90
486 487 6.886178 AGGCTAATAGGTTTAAAGTCCTGA 57.114 37.500 7.47 0.00 35.51 3.86
487 488 9.628500 AAATAGGCTAATAGGTTTAAAGTCCTG 57.372 33.333 0.00 0.00 35.51 3.86
498 499 8.151596 GCAGAGAAGTAAAATAGGCTAATAGGT 58.848 37.037 0.00 0.00 0.00 3.08
499 500 8.371699 AGCAGAGAAGTAAAATAGGCTAATAGG 58.628 37.037 0.00 0.00 0.00 2.57
502 503 8.371699 CCTAGCAGAGAAGTAAAATAGGCTAAT 58.628 37.037 0.00 0.00 31.73 1.73
503 504 7.687103 GCCTAGCAGAGAAGTAAAATAGGCTAA 60.687 40.741 11.64 0.00 46.75 3.09
504 505 6.239345 GCCTAGCAGAGAAGTAAAATAGGCTA 60.239 42.308 11.64 0.00 46.75 3.93
505 506 5.454045 GCCTAGCAGAGAAGTAAAATAGGCT 60.454 44.000 11.64 0.00 46.75 4.58
506 507 4.752604 GCCTAGCAGAGAAGTAAAATAGGC 59.247 45.833 4.33 4.33 45.05 3.93
507 508 6.168270 AGCCTAGCAGAGAAGTAAAATAGG 57.832 41.667 0.00 0.00 33.24 2.57
508 509 6.018343 GCAAGCCTAGCAGAGAAGTAAAATAG 60.018 42.308 0.00 0.00 0.00 1.73
509 510 5.817816 GCAAGCCTAGCAGAGAAGTAAAATA 59.182 40.000 0.00 0.00 0.00 1.40
510 511 4.637977 GCAAGCCTAGCAGAGAAGTAAAAT 59.362 41.667 0.00 0.00 0.00 1.82
511 512 4.003648 GCAAGCCTAGCAGAGAAGTAAAA 58.996 43.478 0.00 0.00 0.00 1.52
512 513 3.261897 AGCAAGCCTAGCAGAGAAGTAAA 59.738 43.478 0.00 0.00 0.00 2.01
513 514 2.834549 AGCAAGCCTAGCAGAGAAGTAA 59.165 45.455 0.00 0.00 0.00 2.24
514 515 2.167281 CAGCAAGCCTAGCAGAGAAGTA 59.833 50.000 0.00 0.00 0.00 2.24
515 516 1.066286 CAGCAAGCCTAGCAGAGAAGT 60.066 52.381 0.00 0.00 0.00 3.01
516 517 1.654317 CAGCAAGCCTAGCAGAGAAG 58.346 55.000 0.00 0.00 0.00 2.85
517 518 0.392193 GCAGCAAGCCTAGCAGAGAA 60.392 55.000 0.00 0.00 37.23 2.87
518 519 1.220206 GCAGCAAGCCTAGCAGAGA 59.780 57.895 0.00 0.00 37.23 3.10
519 520 3.810812 GCAGCAAGCCTAGCAGAG 58.189 61.111 0.00 0.00 37.23 3.35
528 529 0.390735 CCAGGATTTTGGCAGCAAGC 60.391 55.000 0.00 0.00 44.65 4.01
529 530 0.248289 CCCAGGATTTTGGCAGCAAG 59.752 55.000 0.00 0.00 36.88 4.01
530 531 1.193462 CCCCAGGATTTTGGCAGCAA 61.193 55.000 0.00 0.00 36.88 3.91
531 532 1.610086 CCCCAGGATTTTGGCAGCA 60.610 57.895 0.00 0.00 36.88 4.41
532 533 2.361567 CCCCCAGGATTTTGGCAGC 61.362 63.158 0.00 0.00 36.88 5.25
533 534 2.361567 GCCCCCAGGATTTTGGCAG 61.362 63.158 0.00 0.00 41.76 4.85
534 535 2.284552 GCCCCCAGGATTTTGGCA 60.285 61.111 0.00 0.00 41.76 4.92
535 536 3.083349 GGCCCCCAGGATTTTGGC 61.083 66.667 0.00 0.00 41.42 4.52
536 537 0.621280 ATTGGCCCCCAGGATTTTGG 60.621 55.000 0.00 0.00 33.81 3.28
537 538 2.041701 CTATTGGCCCCCAGGATTTTG 58.958 52.381 0.00 0.00 33.81 2.44
538 539 1.692441 GCTATTGGCCCCCAGGATTTT 60.692 52.381 0.00 0.00 33.81 1.82
539 540 0.105504 GCTATTGGCCCCCAGGATTT 60.106 55.000 0.00 0.00 33.81 2.17
540 541 1.001140 AGCTATTGGCCCCCAGGATT 61.001 55.000 0.00 0.00 43.05 3.01
541 542 1.387926 AGCTATTGGCCCCCAGGAT 60.388 57.895 0.00 0.00 43.05 3.24
542 543 2.044450 AGCTATTGGCCCCCAGGA 59.956 61.111 0.00 0.00 43.05 3.86
543 544 2.517919 GAGCTATTGGCCCCCAGG 59.482 66.667 0.00 0.00 43.05 4.45
544 545 2.081161 AGGAGCTATTGGCCCCCAG 61.081 63.158 0.00 0.00 39.92 4.45
545 546 2.044450 AGGAGCTATTGGCCCCCA 59.956 61.111 0.00 0.00 39.92 4.96
569 570 3.243367 CCTTCCAGTTCGCATGAAAAACA 60.243 43.478 0.00 0.00 35.46 2.83
584 585 1.006102 AACGTCGCACTCCTTCCAG 60.006 57.895 0.00 0.00 0.00 3.86
667 668 8.547069 CGTGTTTTTCATTTCATGGTTAAACAT 58.453 29.630 0.00 0.00 37.44 2.71
732 733 0.179121 CACCCGCATGCGAGTAACTA 60.179 55.000 39.90 0.00 42.83 2.24
1088 1105 0.911769 CACAGATCTAACCTGCCCCA 59.088 55.000 0.00 0.00 35.14 4.96
1150 1170 2.354821 CCGCCCTAATTCGAGGAAAAAG 59.645 50.000 0.00 0.00 39.15 2.27
1800 1837 3.635591 CATGGTTATTTTCTCAGGGCCT 58.364 45.455 0.00 0.00 0.00 5.19
1982 2020 4.634004 TGGAACCGTAGACATGCATAAAAG 59.366 41.667 0.00 0.00 0.00 2.27
2081 2123 1.686800 GAGCCCCATGCAAACCCAT 60.687 57.895 0.00 0.00 44.83 4.00
2199 2241 7.013274 TGCTATGGGTTGTTCTTGCTTATTATC 59.987 37.037 0.00 0.00 0.00 1.75


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.