Multiple sequence alignment - TraesCS1D01G447700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G447700 chr1D 100.000 4020 0 0 1 4020 490303935 490307954 0.000000e+00 7424.0
1 TraesCS1D01G447700 chr1D 80.000 750 54 42 611 1286 489781043 489781770 2.190000e-127 466.0
2 TraesCS1D01G447700 chr1D 84.137 498 42 11 1631 2120 489781781 489782249 7.930000e-122 448.0
3 TraesCS1D01G447700 chr1D 88.252 349 16 14 959 1286 488614160 488614504 1.050000e-105 394.0
4 TraesCS1D01G447700 chr1D 78.792 679 69 41 611 1251 489302052 489301411 1.750000e-103 387.0
5 TraesCS1D01G447700 chr1D 78.551 690 60 43 604 1251 489327175 489326532 1.360000e-99 374.0
6 TraesCS1D01G447700 chr1D 78.551 690 60 43 604 1251 489434899 489434256 1.360000e-99 374.0
7 TraesCS1D01G447700 chr1D 82.382 403 36 20 861 1244 489755880 489756266 6.480000e-83 318.0
8 TraesCS1D01G447700 chr1D 82.044 362 34 16 1782 2119 489756314 489756668 3.060000e-71 279.0
9 TraesCS1D01G447700 chr1D 89.474 209 22 0 1631 1839 488611231 488611439 8.570000e-67 265.0
10 TraesCS1D01G447700 chr1D 87.273 220 24 2 1631 1847 488614515 488614733 8.630000e-62 248.0
11 TraesCS1D01G447700 chr1D 84.141 227 22 12 2985 3205 460302005 460301787 1.460000e-49 207.0
12 TraesCS1D01G447700 chr1D 77.206 408 58 19 2791 3168 488643636 488644038 5.270000e-49 206.0
13 TraesCS1D01G447700 chr1D 75.335 523 78 33 2791 3271 489757082 489757595 1.890000e-48 204.0
14 TraesCS1D01G447700 chr1D 87.413 143 8 4 3887 4020 489705067 489705208 5.380000e-34 156.0
15 TraesCS1D01G447700 chr1D 92.135 89 6 1 3731 3819 489704977 489705064 1.520000e-24 124.0
16 TraesCS1D01G447700 chr1D 94.737 57 3 0 451 507 489780902 489780958 5.530000e-14 89.8
17 TraesCS1D01G447700 chrUn 96.431 1373 29 7 1920 3272 9171709 9170337 0.000000e+00 2246.0
18 TraesCS1D01G447700 chrUn 96.224 1377 28 8 1920 3272 205601345 205599969 0.000000e+00 2233.0
19 TraesCS1D01G447700 chrUn 92.142 1298 36 19 6 1261 9174509 9173236 0.000000e+00 1772.0
20 TraesCS1D01G447700 chrUn 90.630 1302 39 21 6 1261 205603553 205602289 0.000000e+00 1652.0
21 TraesCS1D01G447700 chrUn 93.474 567 13 9 2728 3272 377538357 377538921 0.000000e+00 821.0
22 TraesCS1D01G447700 chrUn 94.602 389 15 5 6 390 310672404 310672790 7.440000e-167 597.0
23 TraesCS1D01G447700 chrUn 94.602 389 15 5 6 390 328667855 328668241 7.440000e-167 597.0
24 TraesCS1D01G447700 chrUn 96.802 344 9 2 1539 1881 205601687 205601345 1.250000e-159 573.0
25 TraesCS1D01G447700 chrUn 94.183 361 19 2 1157 1516 205602189 205601830 2.110000e-152 549.0
26 TraesCS1D01G447700 chrUn 94.199 362 16 4 1157 1515 9172565 9172206 7.600000e-152 547.0
27 TraesCS1D01G447700 chrUn 88.000 475 26 11 1 451 9182652 9182185 2.130000e-147 532.0
28 TraesCS1D01G447700 chrUn 92.350 366 17 6 509 870 9181996 9181638 9.970000e-141 510.0
29 TraesCS1D01G447700 chrUn 93.878 343 6 4 1539 1881 9172036 9171709 1.670000e-138 503.0
30 TraesCS1D01G447700 chrUn 95.327 107 5 0 3268 3374 218481600 218481706 1.920000e-38 171.0
31 TraesCS1D01G447700 chr1B 96.224 1377 28 8 1920 3272 682486567 682485191 0.000000e+00 2233.0
32 TraesCS1D01G447700 chr1B 90.699 1301 39 22 6 1261 682488780 682487517 0.000000e+00 1657.0
33 TraesCS1D01G447700 chr1B 97.601 917 20 1 1920 2834 680743215 680742299 0.000000e+00 1570.0
34 TraesCS1D01G447700 chr1B 88.526 1133 93 15 2086 3196 681790963 681792080 0.000000e+00 1338.0
35 TraesCS1D01G447700 chr1B 90.909 638 23 15 1 627 680762016 680761403 0.000000e+00 824.0
36 TraesCS1D01G447700 chr1B 91.470 551 18 3 740 1261 680744593 680744043 0.000000e+00 730.0
37 TraesCS1D01G447700 chr1B 97.093 344 8 2 1539 1881 682486909 682486567 2.690000e-161 579.0
38 TraesCS1D01G447700 chr1B 96.830 347 7 3 1539 1881 680743561 680743215 9.690000e-161 577.0
39 TraesCS1D01G447700 chr1B 94.183 361 19 2 1157 1516 682487417 682487058 2.110000e-152 549.0
40 TraesCS1D01G447700 chr1B 87.083 480 25 14 1 451 680761224 680760753 3.580000e-140 508.0
41 TraesCS1D01G447700 chr1B 89.899 396 12 7 1157 1540 680744045 680743666 6.040000e-133 484.0
42 TraesCS1D01G447700 chr1B 94.718 284 12 3 1 282 680769491 680769209 4.770000e-119 438.0
43 TraesCS1D01G447700 chr1B 86.989 269 24 3 1631 1899 681055030 681054773 3.930000e-75 292.0
44 TraesCS1D01G447700 chr1B 91.192 193 17 0 2080 2272 681792163 681792355 3.080000e-66 263.0
45 TraesCS1D01G447700 chr1B 79.254 429 37 27 1792 2175 682003715 682004136 6.670000e-63 252.0
46 TraesCS1D01G447700 chr1B 79.254 429 37 27 1792 2175 682025723 682025302 6.670000e-63 252.0
47 TraesCS1D01G447700 chr1B 87.330 221 23 3 1631 1847 681050255 681050036 8.630000e-62 248.0
48 TraesCS1D01G447700 chr1B 89.247 186 17 2 2274 2458 681792487 681792670 3.130000e-56 230.0
49 TraesCS1D01G447700 chr1B 88.344 163 13 2 1928 2090 681788197 681788353 1.470000e-44 191.0
50 TraesCS1D01G447700 chr1B 91.736 121 9 1 3265 3385 572291519 572291400 2.490000e-37 167.0
51 TraesCS1D01G447700 chr1B 93.694 111 7 0 3264 3374 632206487 632206597 2.490000e-37 167.0
52 TraesCS1D01G447700 chr1B 87.879 132 14 2 2449 2578 613246058 613245927 1.930000e-33 154.0
53 TraesCS1D01G447700 chr1B 85.211 142 13 2 3887 4020 683093374 683093515 5.420000e-29 139.0
54 TraesCS1D01G447700 chr1B 83.125 160 13 5 2982 3139 681837920 681838067 2.520000e-27 134.0
55 TraesCS1D01G447700 chr1B 87.037 108 11 3 3731 3838 683093278 683093382 7.060000e-23 119.0
56 TraesCS1D01G447700 chr1B 96.226 53 1 1 666 718 680744644 680744593 7.160000e-13 86.1
57 TraesCS1D01G447700 chr1B 80.808 99 6 6 862 959 681787255 681787341 9.330000e-07 65.8
58 TraesCS1D01G447700 chr1A 87.146 988 80 21 2086 3055 587674801 587673843 0.000000e+00 1077.0
59 TraesCS1D01G447700 chr1A 84.605 708 54 20 1197 1891 587705774 587705109 0.000000e+00 652.0
60 TraesCS1D01G447700 chr1A 88.248 451 36 10 1931 2375 587705117 587704678 1.280000e-144 523.0
61 TraesCS1D01G447700 chr1A 89.489 333 26 6 960 1285 587678296 587677966 2.890000e-111 412.0
62 TraesCS1D01G447700 chr1A 86.538 312 30 5 2575 2884 587704467 587704166 2.320000e-87 333.0
63 TraesCS1D01G447700 chr1A 90.456 241 11 2 3040 3271 587673827 587673590 1.400000e-79 307.0
64 TraesCS1D01G447700 chr1A 89.256 242 19 4 2080 2315 587673080 587672840 3.040000e-76 296.0
65 TraesCS1D01G447700 chr1A 88.172 186 18 4 2696 2879 587672409 587672226 6.760000e-53 219.0
66 TraesCS1D01G447700 chr1A 79.144 374 34 17 793 1137 588389614 588389256 6.760000e-53 219.0
67 TraesCS1D01G447700 chr1A 84.472 161 20 4 2982 3141 587928091 587928247 1.930000e-33 154.0
68 TraesCS1D01G447700 chr1A 90.541 74 7 0 2388 2461 587672836 587672763 9.190000e-17 99.0
69 TraesCS1D01G447700 chr1A 79.000 100 16 4 732 829 588663817 588663913 3.350000e-06 63.9
70 TraesCS1D01G447700 chr7A 95.495 111 5 0 3264 3374 25411114 25411004 1.150000e-40 178.0
71 TraesCS1D01G447700 chr7A 100.000 28 0 0 3606 3633 643237951 643237978 7.000000e-03 52.8
72 TraesCS1D01G447700 chr5A 95.536 112 4 1 3263 3374 397145891 397146001 1.150000e-40 178.0
73 TraesCS1D01G447700 chr5A 95.455 110 5 0 3265 3374 383832126 383832235 4.130000e-40 176.0
74 TraesCS1D01G447700 chr5A 92.437 119 7 2 3257 3374 18518679 18518562 6.910000e-38 169.0
75 TraesCS1D01G447700 chr5A 87.050 139 16 2 2451 2587 490696661 490696799 5.380000e-34 156.0
76 TraesCS1D01G447700 chr2A 93.220 118 6 2 3268 3384 111501145 111501261 5.340000e-39 172.0
77 TraesCS1D01G447700 chr2A 91.736 121 9 1 3261 3380 714703806 714703686 2.490000e-37 167.0
78 TraesCS1D01G447700 chr2A 83.453 139 11 8 933 1067 57702005 57702135 7.060000e-23 119.0
79 TraesCS1D01G447700 chr3A 87.143 140 18 0 2187 2326 420739509 420739370 4.160000e-35 159.0
80 TraesCS1D01G447700 chr2B 88.462 130 13 2 2451 2579 723434357 723434229 5.380000e-34 156.0
81 TraesCS1D01G447700 chr6B 81.768 181 29 4 3373 3552 666882811 666882988 9.000000e-32 148.0
82 TraesCS1D01G447700 chr6B 81.098 164 27 4 3385 3548 694264434 694264275 1.170000e-25 128.0
83 TraesCS1D01G447700 chr4B 89.011 91 9 1 3889 3978 78820871 78820961 1.180000e-20 111.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G447700 chr1D 490303935 490307954 4019 False 7424.000000 7424 100.000000 1 4020 1 chr1D.!!$F2 4019
1 TraesCS1D01G447700 chr1D 489301411 489302052 641 True 387.000000 387 78.792000 611 1251 1 chr1D.!!$R2 640
2 TraesCS1D01G447700 chr1D 489326532 489327175 643 True 374.000000 374 78.551000 604 1251 1 chr1D.!!$R3 647
3 TraesCS1D01G447700 chr1D 489434256 489434899 643 True 374.000000 374 78.551000 604 1251 1 chr1D.!!$R4 647
4 TraesCS1D01G447700 chr1D 489780902 489782249 1347 False 334.600000 466 86.291333 451 2120 3 chr1D.!!$F6 1669
5 TraesCS1D01G447700 chr1D 488611231 488614733 3502 False 302.333333 394 88.333000 959 1847 3 chr1D.!!$F3 888
6 TraesCS1D01G447700 chr1D 489755880 489757595 1715 False 267.000000 318 79.920333 861 3271 3 chr1D.!!$F5 2410
7 TraesCS1D01G447700 chrUn 9170337 9174509 4172 True 1267.000000 2246 94.162500 6 3272 4 chrUn.!!$R1 3266
8 TraesCS1D01G447700 chrUn 205599969 205603553 3584 True 1251.750000 2233 94.459750 6 3272 4 chrUn.!!$R3 3266
9 TraesCS1D01G447700 chrUn 377538357 377538921 564 False 821.000000 821 93.474000 2728 3272 1 chrUn.!!$F4 544
10 TraesCS1D01G447700 chrUn 9181638 9182652 1014 True 521.000000 532 90.175000 1 870 2 chrUn.!!$R2 869
11 TraesCS1D01G447700 chr1B 682485191 682488780 3589 True 1254.500000 2233 94.549750 6 3272 4 chr1B.!!$R9 3266
12 TraesCS1D01G447700 chr1B 680742299 680744644 2345 True 689.420000 1570 94.405200 666 2834 5 chr1B.!!$R7 2168
13 TraesCS1D01G447700 chr1B 680760753 680762016 1263 True 666.000000 824 88.996000 1 627 2 chr1B.!!$R8 626
14 TraesCS1D01G447700 chr1B 681787255 681792670 5415 False 417.560000 1338 87.623400 862 3196 5 chr1B.!!$F4 2334
15 TraesCS1D01G447700 chr1A 587704166 587705774 1608 True 502.666667 652 86.463667 1197 2884 3 chr1A.!!$R3 1687
16 TraesCS1D01G447700 chr1A 587672226 587678296 6070 True 401.666667 1077 89.176667 960 3271 6 chr1A.!!$R2 2311

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
179 182 1.349067 AGTCCCCACAACTCCTACAC 58.651 55.000 0.0 0.0 0.00 2.90 F
1216 3985 1.202568 CCAGAATCGATGTAGCCAGCA 60.203 52.381 0.0 0.0 0.00 4.41 F
1898 4869 1.387756 GCAATCGAAACAGCAACATGC 59.612 47.619 0.0 0.0 45.46 4.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1619 4576 1.068333 CGTCAGGATGGGCAGTTTTTG 60.068 52.381 0.0 0.0 36.16 2.44 R
2302 8258 0.324552 TCCCTCCGTCCCGAATTACA 60.325 55.000 0.0 0.0 0.00 2.41 R
3710 10690 0.036952 CAGTTGGGATGAGCGTCACT 60.037 55.000 0.0 0.0 0.00 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
108 110 2.221981 GTGCAAGAACAAGAACTCTCGG 59.778 50.000 0.00 0.00 0.00 4.63
179 182 1.349067 AGTCCCCACAACTCCTACAC 58.651 55.000 0.00 0.00 0.00 2.90
445 482 6.765989 ACTAGCAGAGAAAAATACACACACAA 59.234 34.615 0.00 0.00 0.00 3.33
475 655 4.433186 CATTTTCGGTTAGAACATGCCA 57.567 40.909 0.00 0.00 39.33 4.92
771 1254 1.358759 GCAAGAAACCACACCCACG 59.641 57.895 0.00 0.00 0.00 4.94
1216 3985 1.202568 CCAGAATCGATGTAGCCAGCA 60.203 52.381 0.00 0.00 0.00 4.41
1268 4054 5.173854 GCAACATCTACTTGAAACAAAGCAC 59.826 40.000 0.00 0.00 0.00 4.40
1323 4110 2.555448 CCTTCCCCCTTCTTTGTTCCTC 60.555 54.545 0.00 0.00 0.00 3.71
1326 4113 1.539157 CCCCTTCTTTGTTCCTCTGC 58.461 55.000 0.00 0.00 0.00 4.26
1328 4115 2.431454 CCCTTCTTTGTTCCTCTGCTC 58.569 52.381 0.00 0.00 0.00 4.26
1485 4285 4.019051 TCTCATGTTTCAGGTGGATCATGT 60.019 41.667 8.53 0.00 38.36 3.21
1495 4307 2.276868 GATCATGTGTGCGTGCGC 60.277 61.111 9.85 9.85 42.35 6.09
1496 4308 3.723364 GATCATGTGTGCGTGCGCC 62.723 63.158 14.16 6.16 41.09 6.53
1619 4576 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
1684 4647 6.267471 AGCAACTTATTTTCCTGTTTGATCCA 59.733 34.615 0.00 0.00 0.00 3.41
1851 4819 3.627395 TTTATCTGCCGACATCAAGGT 57.373 42.857 0.00 0.00 0.00 3.50
1880 4851 4.201940 CCTGCGATAATTGAATTCTGTGCA 60.202 41.667 7.05 6.48 0.00 4.57
1881 4852 5.307926 TGCGATAATTGAATTCTGTGCAA 57.692 34.783 7.05 0.00 0.00 4.08
1882 4853 5.893687 TGCGATAATTGAATTCTGTGCAAT 58.106 33.333 7.05 0.00 33.96 3.56
1883 4854 5.972973 TGCGATAATTGAATTCTGTGCAATC 59.027 36.000 7.05 2.32 31.52 2.67
1884 4855 5.114572 GCGATAATTGAATTCTGTGCAATCG 59.885 40.000 7.05 13.41 31.52 3.34
1885 4856 6.421405 CGATAATTGAATTCTGTGCAATCGA 58.579 36.000 7.05 0.00 31.52 3.59
1886 4857 6.906678 CGATAATTGAATTCTGTGCAATCGAA 59.093 34.615 7.05 0.22 31.52 3.71
1887 4858 7.429051 CGATAATTGAATTCTGTGCAATCGAAA 59.571 33.333 7.05 0.00 31.52 3.46
1888 4859 6.695292 AATTGAATTCTGTGCAATCGAAAC 57.305 33.333 7.05 0.00 31.52 2.78
1889 4860 4.827304 TGAATTCTGTGCAATCGAAACA 57.173 36.364 7.05 0.00 0.00 2.83
1890 4861 4.786507 TGAATTCTGTGCAATCGAAACAG 58.213 39.130 7.05 12.25 42.17 3.16
1891 4862 2.686558 TTCTGTGCAATCGAAACAGC 57.313 45.000 13.18 5.68 40.89 4.40
1892 4863 1.592064 TCTGTGCAATCGAAACAGCA 58.408 45.000 13.18 7.84 40.89 4.41
1893 4864 1.946081 TCTGTGCAATCGAAACAGCAA 59.054 42.857 13.18 0.00 40.89 3.91
1894 4865 2.046313 CTGTGCAATCGAAACAGCAAC 58.954 47.619 6.11 3.10 38.91 4.17
1895 4866 1.403323 TGTGCAATCGAAACAGCAACA 59.597 42.857 6.11 5.09 38.91 3.33
1896 4867 2.034432 TGTGCAATCGAAACAGCAACAT 59.966 40.909 6.11 0.00 38.91 2.71
1897 4868 2.406024 GTGCAATCGAAACAGCAACATG 59.594 45.455 6.11 0.00 38.91 3.21
1898 4869 1.387756 GCAATCGAAACAGCAACATGC 59.612 47.619 0.00 0.00 45.46 4.06
1910 4881 2.860062 GCAACATGCATGTGTCTCTTC 58.140 47.619 31.98 7.71 44.26 2.87
1911 4882 2.486982 GCAACATGCATGTGTCTCTTCT 59.513 45.455 31.98 11.74 44.26 2.85
1912 4883 3.686241 GCAACATGCATGTGTCTCTTCTA 59.314 43.478 31.98 0.00 44.26 2.10
1913 4884 4.436584 GCAACATGCATGTGTCTCTTCTAC 60.437 45.833 31.98 5.75 44.26 2.59
1914 4885 4.815533 ACATGCATGTGTCTCTTCTACT 57.184 40.909 30.92 1.38 40.03 2.57
1915 4886 5.921962 ACATGCATGTGTCTCTTCTACTA 57.078 39.130 30.92 0.00 40.03 1.82
1916 4887 6.477053 ACATGCATGTGTCTCTTCTACTAT 57.523 37.500 30.92 0.20 40.03 2.12
1917 4888 6.882656 ACATGCATGTGTCTCTTCTACTATT 58.117 36.000 30.92 0.00 40.03 1.73
1918 4889 8.011844 ACATGCATGTGTCTCTTCTACTATTA 57.988 34.615 30.92 0.00 40.03 0.98
2114 8070 2.361119 GACCTTTTTGCTCGTCCCTTTT 59.639 45.455 0.00 0.00 0.00 2.27
2207 8163 4.696402 CACTCCCTAGCTAGTATTACCTCG 59.304 50.000 19.31 0.78 0.00 4.63
2213 8169 3.401182 AGCTAGTATTACCTCGGTCGAG 58.599 50.000 12.87 12.87 41.63 4.04
2302 8258 8.234136 TCCGTGTATAGACAAATCTAAGACAT 57.766 34.615 0.49 0.00 40.88 3.06
2458 8540 9.431887 GACAACACAGTATCCTTCTTAATTACA 57.568 33.333 0.00 0.00 0.00 2.41
2708 8803 4.431131 CTGCTGGGCGGGGTTCAT 62.431 66.667 0.00 0.00 0.00 2.57
2737 8832 1.884235 AAAGAGGTTGGACGAGCTTG 58.116 50.000 0.00 0.00 0.00 4.01
2764 8859 6.790232 AAAAGAAGAAACCCAATGTCTTCA 57.210 33.333 13.46 0.00 46.38 3.02
2943 9058 4.331968 TCTTTCAAGGTGACAGTTGTGTT 58.668 39.130 0.00 0.00 36.88 3.32
2949 9064 1.816224 GGTGACAGTTGTGTTTGTGGT 59.184 47.619 0.00 0.00 36.88 4.16
2957 9072 0.894141 TGTGTTTGTGGTTGCTGCTT 59.106 45.000 0.00 0.00 0.00 3.91
2970 9085 1.071228 TGCTGCTTCTGCTTTCTCTGA 59.929 47.619 0.00 0.00 40.48 3.27
2971 9086 2.290134 TGCTGCTTCTGCTTTCTCTGAT 60.290 45.455 0.00 0.00 40.48 2.90
3282 10112 1.067212 CAATCTACTCCCTCCGTTCCG 59.933 57.143 0.00 0.00 0.00 4.30
3290 10120 1.753073 TCCCTCCGTTCCGAATTACTC 59.247 52.381 0.00 0.00 0.00 2.59
3294 10124 1.186030 CCGTTCCGAATTACTCGTCG 58.814 55.000 0.00 0.00 46.65 5.12
3299 10129 1.469703 TCCGAATTACTCGTCGCAGAA 59.530 47.619 0.00 0.00 46.65 3.02
3300 10130 2.095110 TCCGAATTACTCGTCGCAGAAA 60.095 45.455 0.00 0.00 46.65 2.52
3302 10132 3.301835 CCGAATTACTCGTCGCAGAAATG 60.302 47.826 0.00 0.00 46.65 2.32
3315 10235 6.393990 GTCGCAGAAATGGATGTATCTAGAT 58.606 40.000 10.73 10.73 39.69 1.98
3316 10236 6.309980 GTCGCAGAAATGGATGTATCTAGATG 59.690 42.308 15.79 0.00 39.69 2.90
3319 10239 7.978414 CGCAGAAATGGATGTATCTAGATGTAT 59.022 37.037 15.79 9.11 0.00 2.29
3320 10240 9.664332 GCAGAAATGGATGTATCTAGATGTATT 57.336 33.333 15.79 4.32 0.00 1.89
3346 10326 9.547753 TTTACTTCTAGATACATCCATTTCTGC 57.452 33.333 0.00 0.00 0.00 4.26
3350 10330 4.679373 AGATACATCCATTTCTGCGACT 57.321 40.909 0.00 0.00 0.00 4.18
3358 10338 6.823689 ACATCCATTTCTGCGACTAGTAATTT 59.176 34.615 0.00 0.00 0.00 1.82
3360 10340 6.403049 TCCATTTCTGCGACTAGTAATTTGA 58.597 36.000 0.00 0.00 0.00 2.69
3361 10341 6.876789 TCCATTTCTGCGACTAGTAATTTGAA 59.123 34.615 0.00 0.00 0.00 2.69
3364 10344 5.756950 TCTGCGACTAGTAATTTGAAACG 57.243 39.130 0.00 0.00 0.00 3.60
3365 10345 5.463286 TCTGCGACTAGTAATTTGAAACGA 58.537 37.500 0.00 0.00 0.00 3.85
3374 10354 8.370182 ACTAGTAATTTGAAACGAAGGGAGTAA 58.630 33.333 0.00 0.00 0.00 2.24
3375 10355 9.379791 CTAGTAATTTGAAACGAAGGGAGTAAT 57.620 33.333 0.00 0.00 0.00 1.89
3376 10356 8.040716 AGTAATTTGAAACGAAGGGAGTAATG 57.959 34.615 0.00 0.00 0.00 1.90
3378 10358 5.934935 TTTGAAACGAAGGGAGTAATGTC 57.065 39.130 0.00 0.00 0.00 3.06
3379 10359 4.610605 TGAAACGAAGGGAGTAATGTCA 57.389 40.909 0.00 0.00 0.00 3.58
3380 10360 4.312443 TGAAACGAAGGGAGTAATGTCAC 58.688 43.478 0.00 0.00 0.00 3.67
3381 10361 4.039973 TGAAACGAAGGGAGTAATGTCACT 59.960 41.667 0.00 0.00 0.00 3.41
3382 10362 5.244402 TGAAACGAAGGGAGTAATGTCACTA 59.756 40.000 0.00 0.00 26.75 2.74
3383 10363 4.715527 ACGAAGGGAGTAATGTCACTAC 57.284 45.455 0.00 0.00 26.75 2.73
3384 10364 4.342359 ACGAAGGGAGTAATGTCACTACT 58.658 43.478 0.00 0.00 32.20 2.57
3385 10365 4.158025 ACGAAGGGAGTAATGTCACTACTG 59.842 45.833 0.00 0.00 29.62 2.74
3386 10366 4.440250 CGAAGGGAGTAATGTCACTACTGG 60.440 50.000 0.00 0.00 29.62 4.00
3388 10368 4.426704 AGGGAGTAATGTCACTACTGGTT 58.573 43.478 0.00 0.00 29.62 3.67
3389 10369 4.844655 AGGGAGTAATGTCACTACTGGTTT 59.155 41.667 0.00 0.00 29.62 3.27
3390 10370 5.046520 AGGGAGTAATGTCACTACTGGTTTC 60.047 44.000 0.00 0.00 29.62 2.78
3393 10373 6.935208 GGAGTAATGTCACTACTGGTTTCTTT 59.065 38.462 0.00 0.00 29.62 2.52
3394 10374 8.092687 GGAGTAATGTCACTACTGGTTTCTTTA 58.907 37.037 0.00 0.00 29.62 1.85
3395 10375 9.654663 GAGTAATGTCACTACTGGTTTCTTTAT 57.345 33.333 0.00 0.00 29.62 1.40
3399 10379 9.959721 AATGTCACTACTGGTTTCTTTATATGT 57.040 29.630 0.00 0.00 0.00 2.29
3400 10380 8.771920 TGTCACTACTGGTTTCTTTATATGTG 57.228 34.615 0.00 0.00 0.00 3.21
3401 10381 7.822334 TGTCACTACTGGTTTCTTTATATGTGG 59.178 37.037 0.00 0.00 0.00 4.17
3402 10382 7.822822 GTCACTACTGGTTTCTTTATATGTGGT 59.177 37.037 0.00 0.00 0.00 4.16
3403 10383 9.038072 TCACTACTGGTTTCTTTATATGTGGTA 57.962 33.333 0.00 0.00 0.00 3.25
3404 10384 9.095065 CACTACTGGTTTCTTTATATGTGGTAC 57.905 37.037 0.00 0.00 0.00 3.34
3405 10385 8.818860 ACTACTGGTTTCTTTATATGTGGTACA 58.181 33.333 0.00 0.00 0.00 2.90
3406 10386 9.832445 CTACTGGTTTCTTTATATGTGGTACAT 57.168 33.333 0.00 0.00 44.52 2.29
3407 10387 8.506168 ACTGGTTTCTTTATATGTGGTACATG 57.494 34.615 4.78 0.00 44.52 3.21
3408 10388 7.067008 ACTGGTTTCTTTATATGTGGTACATGC 59.933 37.037 4.78 0.00 44.52 4.06
3414 10394 8.846943 TCTTTATATGTGGTACATGCTATTGG 57.153 34.615 4.78 0.00 44.52 3.16
3416 10396 8.988546 TTTATATGTGGTACATGCTATTGGTT 57.011 30.769 4.78 0.00 44.52 3.67
3419 10399 4.657013 TGTGGTACATGCTATTGGTTTGA 58.343 39.130 0.00 0.00 44.52 2.69
3420 10400 5.073428 TGTGGTACATGCTATTGGTTTGAA 58.927 37.500 0.00 0.00 44.52 2.69
3421 10401 5.182950 TGTGGTACATGCTATTGGTTTGAAG 59.817 40.000 0.00 0.00 44.52 3.02
3422 10402 5.183140 GTGGTACATGCTATTGGTTTGAAGT 59.817 40.000 0.00 0.00 44.52 3.01
3423 10403 5.182950 TGGTACATGCTATTGGTTTGAAGTG 59.817 40.000 0.00 0.00 0.00 3.16
3424 10404 5.183140 GGTACATGCTATTGGTTTGAAGTGT 59.817 40.000 0.00 0.00 0.00 3.55
3425 10405 5.789643 ACATGCTATTGGTTTGAAGTGTT 57.210 34.783 0.00 0.00 0.00 3.32
3426 10406 5.531634 ACATGCTATTGGTTTGAAGTGTTG 58.468 37.500 0.00 0.00 0.00 3.33
3427 10407 5.301551 ACATGCTATTGGTTTGAAGTGTTGA 59.698 36.000 0.00 0.00 0.00 3.18
3428 10408 5.181690 TGCTATTGGTTTGAAGTGTTGAC 57.818 39.130 0.00 0.00 0.00 3.18
3429 10409 4.887071 TGCTATTGGTTTGAAGTGTTGACT 59.113 37.500 0.00 0.00 0.00 3.41
3431 10411 6.127479 TGCTATTGGTTTGAAGTGTTGACTTT 60.127 34.615 0.00 0.00 42.80 2.66
3432 10412 6.198966 GCTATTGGTTTGAAGTGTTGACTTTG 59.801 38.462 0.00 0.00 42.80 2.77
3433 10413 3.843999 TGGTTTGAAGTGTTGACTTTGC 58.156 40.909 0.00 0.00 42.80 3.68
3435 10415 3.186909 GTTTGAAGTGTTGACTTTGCCC 58.813 45.455 0.00 0.00 42.80 5.36
3436 10416 2.136298 TGAAGTGTTGACTTTGCCCA 57.864 45.000 0.00 0.00 42.80 5.36
3437 10417 2.665165 TGAAGTGTTGACTTTGCCCAT 58.335 42.857 0.00 0.00 42.80 4.00
3439 10419 2.664402 AGTGTTGACTTTGCCCATCT 57.336 45.000 0.00 0.00 0.00 2.90
3440 10420 3.788227 AGTGTTGACTTTGCCCATCTA 57.212 42.857 0.00 0.00 0.00 1.98
3444 10424 5.539955 AGTGTTGACTTTGCCCATCTAAATT 59.460 36.000 0.00 0.00 0.00 1.82
3445 10425 6.041979 AGTGTTGACTTTGCCCATCTAAATTT 59.958 34.615 0.00 0.00 0.00 1.82
3447 10427 7.542130 GTGTTGACTTTGCCCATCTAAATTTAG 59.458 37.037 17.60 17.60 0.00 1.85
3448 10428 7.450014 TGTTGACTTTGCCCATCTAAATTTAGA 59.550 33.333 26.04 26.04 43.35 2.10
3449 10429 8.303876 GTTGACTTTGCCCATCTAAATTTAGAA 58.696 33.333 27.21 11.35 42.55 2.10
3450 10430 8.593945 TGACTTTGCCCATCTAAATTTAGAAT 57.406 30.769 27.21 15.24 42.55 2.40
3451 10431 8.686334 TGACTTTGCCCATCTAAATTTAGAATC 58.314 33.333 27.21 17.41 42.55 2.52
3452 10432 8.829373 ACTTTGCCCATCTAAATTTAGAATCT 57.171 30.769 27.21 12.01 42.55 2.40
3453 10433 9.259832 ACTTTGCCCATCTAAATTTAGAATCTT 57.740 29.630 27.21 11.68 42.55 2.40
3454 10434 9.525409 CTTTGCCCATCTAAATTTAGAATCTTG 57.475 33.333 27.21 20.65 42.55 3.02
3455 10435 8.593945 TTGCCCATCTAAATTTAGAATCTTGT 57.406 30.769 27.21 10.70 42.55 3.16
3456 10436 8.225603 TGCCCATCTAAATTTAGAATCTTGTC 57.774 34.615 27.21 15.83 42.55 3.18
3457 10437 8.055181 TGCCCATCTAAATTTAGAATCTTGTCT 58.945 33.333 27.21 9.40 42.55 3.41
3458 10438 8.563732 GCCCATCTAAATTTAGAATCTTGTCTC 58.436 37.037 27.21 11.04 42.55 3.36
3460 10440 9.061435 CCATCTAAATTTAGAATCTTGTCTCCC 57.939 37.037 27.21 0.00 42.55 4.30
3461 10441 9.061435 CATCTAAATTTAGAATCTTGTCTCCCC 57.939 37.037 27.21 0.00 42.55 4.81
3462 10442 7.574607 TCTAAATTTAGAATCTTGTCTCCCCC 58.425 38.462 22.73 0.00 36.88 5.40
3476 10456 2.677228 CCCCCTCCACGCATTCTT 59.323 61.111 0.00 0.00 0.00 2.52
3477 10457 1.000896 CCCCCTCCACGCATTCTTT 60.001 57.895 0.00 0.00 0.00 2.52
3478 10458 1.315257 CCCCCTCCACGCATTCTTTG 61.315 60.000 0.00 0.00 0.00 2.77
3480 10460 1.683011 CCCCTCCACGCATTCTTTGAT 60.683 52.381 0.00 0.00 0.00 2.57
3482 10462 3.480470 CCCTCCACGCATTCTTTGATAT 58.520 45.455 0.00 0.00 0.00 1.63
3483 10463 3.885297 CCCTCCACGCATTCTTTGATATT 59.115 43.478 0.00 0.00 0.00 1.28
3484 10464 4.339247 CCCTCCACGCATTCTTTGATATTT 59.661 41.667 0.00 0.00 0.00 1.40
3485 10465 5.163519 CCCTCCACGCATTCTTTGATATTTT 60.164 40.000 0.00 0.00 0.00 1.82
3486 10466 5.745294 CCTCCACGCATTCTTTGATATTTTG 59.255 40.000 0.00 0.00 0.00 2.44
3487 10467 6.404623 CCTCCACGCATTCTTTGATATTTTGA 60.405 38.462 0.00 0.00 0.00 2.69
3488 10468 6.321717 TCCACGCATTCTTTGATATTTTGAC 58.678 36.000 0.00 0.00 0.00 3.18
3489 10469 5.516339 CCACGCATTCTTTGATATTTTGACC 59.484 40.000 0.00 0.00 0.00 4.02
3492 10472 7.967854 CACGCATTCTTTGATATTTTGACCTAA 59.032 33.333 0.00 0.00 0.00 2.69
3493 10473 8.686334 ACGCATTCTTTGATATTTTGACCTAAT 58.314 29.630 0.00 0.00 0.00 1.73
3494 10474 8.961092 CGCATTCTTTGATATTTTGACCTAATG 58.039 33.333 0.00 0.00 0.00 1.90
3495 10475 9.252962 GCATTCTTTGATATTTTGACCTAATGG 57.747 33.333 0.00 0.00 39.83 3.16
3496 10476 9.754382 CATTCTTTGATATTTTGACCTAATGGG 57.246 33.333 0.00 0.00 41.89 4.00
3512 10492 7.086685 CCTAATGGGTAATAGTATGGTGGTT 57.913 40.000 0.00 0.00 0.00 3.67
3514 10494 8.662255 CCTAATGGGTAATAGTATGGTGGTTAA 58.338 37.037 0.00 0.00 0.00 2.01
3538 10518 5.462530 AATATAATTTAGCGTTTGGGGCC 57.537 39.130 0.00 0.00 0.00 5.80
3539 10519 1.476477 TAATTTAGCGTTTGGGGCCC 58.524 50.000 18.17 18.17 0.00 5.80
3540 10520 0.252057 AATTTAGCGTTTGGGGCCCT 60.252 50.000 25.93 4.22 0.00 5.19
3541 10521 0.683179 ATTTAGCGTTTGGGGCCCTC 60.683 55.000 25.93 12.89 0.00 4.30
3542 10522 2.070399 TTTAGCGTTTGGGGCCCTCA 62.070 55.000 25.93 15.72 0.00 3.86
3543 10523 1.858739 TTAGCGTTTGGGGCCCTCAT 61.859 55.000 25.93 5.18 0.00 2.90
3544 10524 2.265467 TAGCGTTTGGGGCCCTCATC 62.265 60.000 25.93 5.04 0.00 2.92
3545 10525 2.440247 CGTTTGGGGCCCTCATCC 60.440 66.667 25.93 4.58 0.00 3.51
3546 10526 2.983879 CGTTTGGGGCCCTCATCCT 61.984 63.158 25.93 0.00 0.00 3.24
3547 10527 1.076705 GTTTGGGGCCCTCATCCTC 60.077 63.158 25.93 2.81 0.00 3.71
3548 10528 1.230281 TTTGGGGCCCTCATCCTCT 60.230 57.895 25.93 0.00 0.00 3.69
3549 10529 0.850883 TTTGGGGCCCTCATCCTCTT 60.851 55.000 25.93 0.00 0.00 2.85
3550 10530 0.045623 TTGGGGCCCTCATCCTCTTA 59.954 55.000 25.93 0.00 0.00 2.10
3551 10531 0.400525 TGGGGCCCTCATCCTCTTAG 60.401 60.000 25.93 0.00 0.00 2.18
3552 10532 0.400670 GGGGCCCTCATCCTCTTAGT 60.401 60.000 24.38 0.00 0.00 2.24
3553 10533 1.052617 GGGCCCTCATCCTCTTAGTC 58.947 60.000 17.04 0.00 0.00 2.59
3554 10534 1.413808 GGGCCCTCATCCTCTTAGTCT 60.414 57.143 17.04 0.00 0.00 3.24
3555 10535 2.403561 GGCCCTCATCCTCTTAGTCTT 58.596 52.381 0.00 0.00 0.00 3.01
3557 10537 3.322541 GGCCCTCATCCTCTTAGTCTTAC 59.677 52.174 0.00 0.00 0.00 2.34
3558 10538 3.004944 GCCCTCATCCTCTTAGTCTTACG 59.995 52.174 0.00 0.00 0.00 3.18
3559 10539 3.570550 CCCTCATCCTCTTAGTCTTACGG 59.429 52.174 0.00 0.00 0.00 4.02
3560 10540 3.004944 CCTCATCCTCTTAGTCTTACGGC 59.995 52.174 0.00 0.00 0.00 5.68
3564 10544 1.409427 CCTCTTAGTCTTACGGCCCAG 59.591 57.143 0.00 0.00 0.00 4.45
3565 10545 2.376109 CTCTTAGTCTTACGGCCCAGA 58.624 52.381 0.00 0.00 0.00 3.86
3566 10546 2.359531 CTCTTAGTCTTACGGCCCAGAG 59.640 54.545 0.00 0.00 0.00 3.35
3567 10547 0.822164 TTAGTCTTACGGCCCAGAGC 59.178 55.000 0.00 0.00 42.60 4.09
3568 10548 1.381928 TAGTCTTACGGCCCAGAGCG 61.382 60.000 0.00 0.00 45.17 5.03
3569 10549 3.458163 TCTTACGGCCCAGAGCGG 61.458 66.667 0.00 0.00 45.17 5.52
3578 10558 4.335647 CCAGAGCGGTTGGCCTGT 62.336 66.667 3.32 0.00 45.17 4.00
3579 10559 2.281761 CAGAGCGGTTGGCCTGTT 60.282 61.111 3.32 0.00 45.17 3.16
3580 10560 1.898574 CAGAGCGGTTGGCCTGTTT 60.899 57.895 3.32 0.00 45.17 2.83
3581 10561 1.898574 AGAGCGGTTGGCCTGTTTG 60.899 57.895 3.32 0.00 45.17 2.93
3585 10565 1.654220 CGGTTGGCCTGTTTGTCTG 59.346 57.895 3.32 0.00 0.00 3.51
3593 10573 1.755179 CCTGTTTGTCTGGCCTATGG 58.245 55.000 3.32 0.00 0.00 2.74
3594 10574 1.683011 CCTGTTTGTCTGGCCTATGGG 60.683 57.143 3.32 0.00 0.00 4.00
3604 10584 2.196776 CCTATGGGCCTGCCTTGG 59.803 66.667 4.53 1.98 36.10 3.61
3605 10585 2.693871 CCTATGGGCCTGCCTTGGT 61.694 63.158 4.53 0.00 36.10 3.67
3606 10586 1.352622 CCTATGGGCCTGCCTTGGTA 61.353 60.000 4.53 0.00 36.10 3.25
3607 10587 0.179018 CTATGGGCCTGCCTTGGTAC 60.179 60.000 4.53 0.00 36.10 3.34
3608 10588 1.641552 TATGGGCCTGCCTTGGTACC 61.642 60.000 4.43 4.43 36.10 3.34
3610 10590 4.029809 GGCCTGCCTTGGTACCGT 62.030 66.667 7.57 0.00 0.00 4.83
3612 10592 2.125673 CCTGCCTTGGTACCGTCG 60.126 66.667 7.57 0.00 0.00 5.12
3613 10593 2.125673 CTGCCTTGGTACCGTCGG 60.126 66.667 10.48 10.48 0.00 4.79
3614 10594 3.659089 CTGCCTTGGTACCGTCGGG 62.659 68.421 17.28 7.58 40.11 5.14
3615 10595 4.462280 GCCTTGGTACCGTCGGGG 62.462 72.222 17.28 6.93 43.62 5.73
3627 10607 4.051167 TCGGGGTCTCTGGCGGTA 62.051 66.667 0.00 0.00 0.00 4.02
3628 10608 3.528370 CGGGGTCTCTGGCGGTAG 61.528 72.222 0.00 0.00 0.00 3.18
3630 10610 3.155167 GGGTCTCTGGCGGTAGGG 61.155 72.222 0.00 0.00 0.00 3.53
3632 10612 1.076485 GGTCTCTGGCGGTAGGGTA 60.076 63.158 0.00 0.00 0.00 3.69
3633 10613 1.390383 GGTCTCTGGCGGTAGGGTAC 61.390 65.000 0.00 0.00 0.00 3.34
3650 10630 3.764885 GTACCACTATGTACCGTTCGT 57.235 47.619 0.00 0.00 36.02 3.85
3652 10632 1.888512 ACCACTATGTACCGTTCGTGT 59.111 47.619 0.00 0.00 0.00 4.49
3653 10633 2.297033 ACCACTATGTACCGTTCGTGTT 59.703 45.455 0.00 0.00 0.00 3.32
3654 10634 3.243839 ACCACTATGTACCGTTCGTGTTT 60.244 43.478 0.00 0.00 0.00 2.83
3656 10636 4.232221 CACTATGTACCGTTCGTGTTTCT 58.768 43.478 0.00 0.00 0.00 2.52
3658 10638 5.510674 CACTATGTACCGTTCGTGTTTCTAG 59.489 44.000 0.00 0.00 0.00 2.43
3659 10639 2.664916 TGTACCGTTCGTGTTTCTAGC 58.335 47.619 0.00 0.00 0.00 3.42
3661 10641 0.665369 ACCGTTCGTGTTTCTAGCGG 60.665 55.000 0.00 0.00 42.86 5.52
3662 10642 0.665369 CCGTTCGTGTTTCTAGCGGT 60.665 55.000 0.00 0.00 33.87 5.68
3663 10643 1.401409 CCGTTCGTGTTTCTAGCGGTA 60.401 52.381 0.00 0.00 33.87 4.02
3664 10644 1.909532 CGTTCGTGTTTCTAGCGGTAG 59.090 52.381 15.51 15.51 0.00 3.18
3665 10645 2.257034 GTTCGTGTTTCTAGCGGTAGG 58.743 52.381 20.78 4.55 0.00 3.18
3666 10646 1.538047 TCGTGTTTCTAGCGGTAGGT 58.462 50.000 20.78 0.00 0.00 3.08
3667 10647 1.470098 TCGTGTTTCTAGCGGTAGGTC 59.530 52.381 20.78 11.89 0.00 3.85
3677 10657 2.126189 GGTAGGTCCGTGTCGTGC 60.126 66.667 0.00 0.00 0.00 5.34
3678 10658 2.126189 GTAGGTCCGTGTCGTGCC 60.126 66.667 0.00 0.00 0.00 5.01
3689 10669 4.444838 TCGTGCCTGCGCCGTTAT 62.445 61.111 4.18 0.00 32.58 1.89
3691 10671 3.876198 GTGCCTGCGCCGTTATGG 61.876 66.667 4.18 0.00 42.50 2.74
3700 10680 3.104766 CCGTTATGGCAGCTGCTG 58.895 61.111 35.82 24.80 41.70 4.41
3701 10681 1.450134 CCGTTATGGCAGCTGCTGA 60.450 57.895 35.82 23.78 41.70 4.26
3702 10682 1.709147 CCGTTATGGCAGCTGCTGAC 61.709 60.000 35.82 30.34 40.49 3.51
3706 10686 2.360726 TGGCAGCTGCTGACATGG 60.361 61.111 33.18 6.04 45.48 3.66
3707 10687 2.045634 GGCAGCTGCTGACATGGA 60.046 61.111 35.82 0.00 39.71 3.41
3708 10688 1.453379 GGCAGCTGCTGACATGGAT 60.453 57.895 35.82 0.00 39.71 3.41
3709 10689 0.179037 GGCAGCTGCTGACATGGATA 60.179 55.000 35.82 0.00 39.71 2.59
3710 10690 1.671979 GCAGCTGCTGACATGGATAA 58.328 50.000 32.30 0.00 38.21 1.75
3711 10691 1.602851 GCAGCTGCTGACATGGATAAG 59.397 52.381 32.30 2.24 38.21 1.73
3712 10692 2.915349 CAGCTGCTGACATGGATAAGT 58.085 47.619 24.88 0.00 32.44 2.24
3713 10693 2.612672 CAGCTGCTGACATGGATAAGTG 59.387 50.000 24.88 0.00 32.44 3.16
3715 10695 2.611292 GCTGCTGACATGGATAAGTGAC 59.389 50.000 0.00 0.00 0.00 3.67
3716 10696 2.862536 CTGCTGACATGGATAAGTGACG 59.137 50.000 0.00 0.00 0.00 4.35
3717 10697 1.594862 GCTGACATGGATAAGTGACGC 59.405 52.381 0.00 0.00 0.00 5.19
3718 10698 2.739932 GCTGACATGGATAAGTGACGCT 60.740 50.000 0.00 0.00 0.00 5.07
3719 10699 3.119291 CTGACATGGATAAGTGACGCTC 58.881 50.000 0.00 0.00 0.00 5.03
3720 10700 2.495669 TGACATGGATAAGTGACGCTCA 59.504 45.455 0.00 0.00 0.00 4.26
3723 10703 2.890808 TGGATAAGTGACGCTCATCC 57.109 50.000 10.87 10.87 36.50 3.51
3724 10704 1.412710 TGGATAAGTGACGCTCATCCC 59.587 52.381 14.55 3.40 35.32 3.85
3725 10705 1.412710 GGATAAGTGACGCTCATCCCA 59.587 52.381 6.91 0.00 30.87 4.37
3727 10707 2.380084 TAAGTGACGCTCATCCCAAC 57.620 50.000 0.00 0.00 0.00 3.77
3730 10710 0.320771 GTGACGCTCATCCCAACTGT 60.321 55.000 0.00 0.00 0.00 3.55
3731 10711 0.396435 TGACGCTCATCCCAACTGTT 59.604 50.000 0.00 0.00 0.00 3.16
3732 10712 1.202758 TGACGCTCATCCCAACTGTTT 60.203 47.619 0.00 0.00 0.00 2.83
3733 10713 1.197721 GACGCTCATCCCAACTGTTTG 59.802 52.381 0.00 0.00 0.00 2.93
3746 10726 5.610235 CAACTGTTTGGGCATTTTATTGG 57.390 39.130 0.00 0.00 0.00 3.16
3747 10727 3.673902 ACTGTTTGGGCATTTTATTGGC 58.326 40.909 0.00 0.00 41.20 4.52
3748 10728 2.672381 CTGTTTGGGCATTTTATTGGCG 59.328 45.455 0.00 0.00 42.75 5.69
3749 10729 2.006169 GTTTGGGCATTTTATTGGCGG 58.994 47.619 0.00 0.00 42.75 6.13
3754 10734 2.365293 GGGCATTTTATTGGCGGATCTT 59.635 45.455 0.00 0.00 42.75 2.40
3755 10735 3.383761 GGCATTTTATTGGCGGATCTTG 58.616 45.455 0.00 0.00 32.10 3.02
3756 10736 3.383761 GCATTTTATTGGCGGATCTTGG 58.616 45.455 0.00 0.00 0.00 3.61
3757 10737 3.068024 GCATTTTATTGGCGGATCTTGGA 59.932 43.478 0.00 0.00 0.00 3.53
3758 10738 4.794003 GCATTTTATTGGCGGATCTTGGAG 60.794 45.833 0.00 0.00 0.00 3.86
3759 10739 1.967319 TTATTGGCGGATCTTGGAGC 58.033 50.000 0.00 0.00 0.00 4.70
3765 10745 1.106285 GCGGATCTTGGAGCCAAAAT 58.894 50.000 3.24 0.00 38.11 1.82
3766 10746 1.202336 GCGGATCTTGGAGCCAAAATG 60.202 52.381 3.24 0.00 38.11 2.32
3769 10749 3.181493 CGGATCTTGGAGCCAAAATGAAG 60.181 47.826 3.24 0.00 38.11 3.02
3770 10750 4.019174 GGATCTTGGAGCCAAAATGAAGA 58.981 43.478 3.24 0.00 38.12 2.87
3771 10751 4.097589 GGATCTTGGAGCCAAAATGAAGAG 59.902 45.833 3.24 0.00 38.12 2.85
3773 10753 2.291209 TGGAGCCAAAATGAAGAGCA 57.709 45.000 0.00 0.00 0.00 4.26
3775 10755 2.559668 TGGAGCCAAAATGAAGAGCAAG 59.440 45.455 0.00 0.00 0.00 4.01
3776 10756 2.094338 GGAGCCAAAATGAAGAGCAAGG 60.094 50.000 0.00 0.00 0.00 3.61
3777 10757 2.560105 GAGCCAAAATGAAGAGCAAGGT 59.440 45.455 0.00 0.00 0.00 3.50
3778 10758 3.758554 GAGCCAAAATGAAGAGCAAGGTA 59.241 43.478 0.00 0.00 0.00 3.08
3779 10759 4.151883 AGCCAAAATGAAGAGCAAGGTAA 58.848 39.130 0.00 0.00 0.00 2.85
3781 10761 5.105063 GCCAAAATGAAGAGCAAGGTAATC 58.895 41.667 0.00 0.00 0.00 1.75
3782 10762 5.105595 GCCAAAATGAAGAGCAAGGTAATCT 60.106 40.000 0.00 0.00 0.00 2.40
3784 10764 6.405176 CCAAAATGAAGAGCAAGGTAATCTCC 60.405 42.308 0.00 0.00 0.00 3.71
3785 10765 5.441718 AATGAAGAGCAAGGTAATCTCCA 57.558 39.130 0.00 0.00 0.00 3.86
3786 10766 5.643421 ATGAAGAGCAAGGTAATCTCCAT 57.357 39.130 0.00 0.00 0.00 3.41
3787 10767 5.028549 TGAAGAGCAAGGTAATCTCCATC 57.971 43.478 0.00 0.00 0.00 3.51
3788 10768 4.141620 TGAAGAGCAAGGTAATCTCCATCC 60.142 45.833 0.00 0.00 0.00 3.51
3790 10770 4.043596 AGAGCAAGGTAATCTCCATCCTT 58.956 43.478 0.00 0.00 40.38 3.36
3791 10771 4.476479 AGAGCAAGGTAATCTCCATCCTTT 59.524 41.667 0.00 0.00 38.09 3.11
3793 10773 3.561725 GCAAGGTAATCTCCATCCTTTCG 59.438 47.826 0.00 0.00 38.09 3.46
3794 10774 4.770795 CAAGGTAATCTCCATCCTTTCGT 58.229 43.478 0.00 0.00 38.09 3.85
3796 10776 3.388350 AGGTAATCTCCATCCTTTCGTCC 59.612 47.826 0.00 0.00 0.00 4.79
3798 10778 4.383770 GGTAATCTCCATCCTTTCGTCCAA 60.384 45.833 0.00 0.00 0.00 3.53
3799 10779 4.510167 AATCTCCATCCTTTCGTCCAAT 57.490 40.909 0.00 0.00 0.00 3.16
3800 10780 4.510167 ATCTCCATCCTTTCGTCCAATT 57.490 40.909 0.00 0.00 0.00 2.32
3801 10781 4.301072 TCTCCATCCTTTCGTCCAATTT 57.699 40.909 0.00 0.00 0.00 1.82
3802 10782 4.662278 TCTCCATCCTTTCGTCCAATTTT 58.338 39.130 0.00 0.00 0.00 1.82
3803 10783 5.076873 TCTCCATCCTTTCGTCCAATTTTT 58.923 37.500 0.00 0.00 0.00 1.94
3896 10876 2.715737 GAACGGGCTGTTGCATTTAA 57.284 45.000 18.01 0.00 42.09 1.52
3897 10877 3.019933 GAACGGGCTGTTGCATTTAAA 57.980 42.857 18.01 0.00 42.09 1.52
3898 10878 3.385577 GAACGGGCTGTTGCATTTAAAA 58.614 40.909 18.01 0.00 42.09 1.52
3899 10879 2.749776 ACGGGCTGTTGCATTTAAAAC 58.250 42.857 0.00 0.00 41.91 2.43
3900 10880 2.101582 ACGGGCTGTTGCATTTAAAACA 59.898 40.909 0.00 0.00 41.91 2.83
3903 10883 4.557695 CGGGCTGTTGCATTTAAAACACTA 60.558 41.667 0.00 0.00 41.91 2.74
3904 10884 5.478407 GGGCTGTTGCATTTAAAACACTAT 58.522 37.500 0.00 0.00 41.91 2.12
3905 10885 5.348451 GGGCTGTTGCATTTAAAACACTATG 59.652 40.000 0.00 0.00 41.91 2.23
3906 10886 5.925969 GGCTGTTGCATTTAAAACACTATGT 59.074 36.000 0.00 0.00 41.91 2.29
3908 10888 7.273381 GGCTGTTGCATTTAAAACACTATGTAG 59.727 37.037 0.00 0.00 41.91 2.74
3909 10889 8.020819 GCTGTTGCATTTAAAACACTATGTAGA 58.979 33.333 0.00 0.00 39.41 2.59
3911 10891 9.672086 TGTTGCATTTAAAACACTATGTAGAAC 57.328 29.630 0.00 0.00 31.52 3.01
3912 10892 9.124807 GTTGCATTTAAAACACTATGTAGAACC 57.875 33.333 0.00 0.00 0.00 3.62
3913 10893 7.822658 TGCATTTAAAACACTATGTAGAACCC 58.177 34.615 0.00 0.00 0.00 4.11
3914 10894 7.668052 TGCATTTAAAACACTATGTAGAACCCT 59.332 33.333 0.00 0.00 0.00 4.34
3920 10900 8.803397 AAAACACTATGTAGAACCCTATTTCC 57.197 34.615 0.00 0.00 0.00 3.13
3921 10901 7.750947 AACACTATGTAGAACCCTATTTCCT 57.249 36.000 0.00 0.00 0.00 3.36
3923 10903 6.901300 ACACTATGTAGAACCCTATTTCCTCA 59.099 38.462 0.00 0.00 0.00 3.86
3925 10905 7.711339 CACTATGTAGAACCCTATTTCCTCAAC 59.289 40.741 0.00 0.00 0.00 3.18
3926 10906 6.893020 ATGTAGAACCCTATTTCCTCAACT 57.107 37.500 0.00 0.00 0.00 3.16
3932 10912 4.407365 ACCCTATTTCCTCAACTTGTTGG 58.593 43.478 12.75 4.78 0.00 3.77
3933 10913 4.105697 ACCCTATTTCCTCAACTTGTTGGA 59.894 41.667 12.75 1.67 0.00 3.53
3934 10914 5.076873 CCCTATTTCCTCAACTTGTTGGAA 58.923 41.667 12.75 12.01 36.87 3.53
3942 10922 7.687941 TCCTCAACTTGTTGGAAATTATCTC 57.312 36.000 12.75 0.00 0.00 2.75
3943 10923 6.659242 TCCTCAACTTGTTGGAAATTATCTCC 59.341 38.462 12.75 0.00 0.00 3.71
3945 10925 7.123247 CCTCAACTTGTTGGAAATTATCTCCAT 59.877 37.037 12.75 0.00 42.56 3.41
3947 10927 8.869109 TCAACTTGTTGGAAATTATCTCCATTT 58.131 29.630 12.75 0.00 42.56 2.32
3957 10937 9.586435 GGAAATTATCTCCATTTTAAAGTGTGG 57.414 33.333 9.54 9.27 32.77 4.17
3960 10940 9.927668 AATTATCTCCATTTTAAAGTGTGGTTG 57.072 29.630 9.54 7.46 33.47 3.77
3963 10943 6.568869 TCTCCATTTTAAAGTGTGGTTGTTG 58.431 36.000 9.54 0.00 33.47 3.33
3965 10945 6.102663 TCCATTTTAAAGTGTGGTTGTTGTG 58.897 36.000 9.54 0.00 33.47 3.33
3966 10946 5.872070 CCATTTTAAAGTGTGGTTGTTGTGT 59.128 36.000 9.54 0.00 0.00 3.72
3967 10947 6.370166 CCATTTTAAAGTGTGGTTGTTGTGTT 59.630 34.615 9.54 0.00 0.00 3.32
3969 10949 6.771188 TTTAAAGTGTGGTTGTTGTGTTTG 57.229 33.333 0.00 0.00 0.00 2.93
3970 10950 4.329462 AAAGTGTGGTTGTTGTGTTTGT 57.671 36.364 0.00 0.00 0.00 2.83
3971 10951 3.296322 AGTGTGGTTGTTGTGTTTGTG 57.704 42.857 0.00 0.00 0.00 3.33
3973 10953 3.821600 AGTGTGGTTGTTGTGTTTGTGTA 59.178 39.130 0.00 0.00 0.00 2.90
3974 10954 4.278669 AGTGTGGTTGTTGTGTTTGTGTAA 59.721 37.500 0.00 0.00 0.00 2.41
3975 10955 5.047660 AGTGTGGTTGTTGTGTTTGTGTAAT 60.048 36.000 0.00 0.00 0.00 1.89
3976 10956 6.151312 AGTGTGGTTGTTGTGTTTGTGTAATA 59.849 34.615 0.00 0.00 0.00 0.98
3979 10959 7.148069 TGTGGTTGTTGTGTTTGTGTAATATGA 60.148 33.333 0.00 0.00 0.00 2.15
3980 10960 7.378461 GTGGTTGTTGTGTTTGTGTAATATGAG 59.622 37.037 0.00 0.00 0.00 2.90
3981 10961 6.861055 GGTTGTTGTGTTTGTGTAATATGAGG 59.139 38.462 0.00 0.00 0.00 3.86
3982 10962 6.007936 TGTTGTGTTTGTGTAATATGAGGC 57.992 37.500 0.00 0.00 0.00 4.70
3983 10963 5.532779 TGTTGTGTTTGTGTAATATGAGGCA 59.467 36.000 0.00 0.00 0.00 4.75
3984 10964 5.878332 TGTGTTTGTGTAATATGAGGCAG 57.122 39.130 0.00 0.00 0.00 4.85
3986 10966 6.468543 TGTGTTTGTGTAATATGAGGCAGTA 58.531 36.000 0.00 0.00 0.00 2.74
3987 10967 6.593770 TGTGTTTGTGTAATATGAGGCAGTAG 59.406 38.462 0.00 0.00 0.00 2.57
3989 10969 7.762615 GTGTTTGTGTAATATGAGGCAGTAGTA 59.237 37.037 0.00 0.00 0.00 1.82
3992 10972 7.891498 TGTGTAATATGAGGCAGTAGTAGAA 57.109 36.000 0.00 0.00 0.00 2.10
3993 10973 8.478775 TGTGTAATATGAGGCAGTAGTAGAAT 57.521 34.615 0.00 0.00 0.00 2.40
3995 10975 8.361139 GTGTAATATGAGGCAGTAGTAGAATGT 58.639 37.037 0.00 0.00 0.00 2.71
3996 10976 8.360390 TGTAATATGAGGCAGTAGTAGAATGTG 58.640 37.037 0.00 0.00 0.00 3.21
3998 10978 4.720649 TGAGGCAGTAGTAGAATGTGTC 57.279 45.455 0.00 0.00 0.00 3.67
3999 10979 3.128764 TGAGGCAGTAGTAGAATGTGTCG 59.871 47.826 0.00 0.00 0.00 4.35
4000 10980 3.353557 AGGCAGTAGTAGAATGTGTCGA 58.646 45.455 0.00 0.00 0.00 4.20
4001 10981 3.954904 AGGCAGTAGTAGAATGTGTCGAT 59.045 43.478 0.00 0.00 0.00 3.59
4002 10982 4.045104 GGCAGTAGTAGAATGTGTCGATG 58.955 47.826 0.00 0.00 0.00 3.84
4004 10984 5.340803 GCAGTAGTAGAATGTGTCGATGAA 58.659 41.667 0.00 0.00 0.00 2.57
4005 10985 5.980116 GCAGTAGTAGAATGTGTCGATGAAT 59.020 40.000 0.00 0.00 0.00 2.57
4006 10986 6.074623 GCAGTAGTAGAATGTGTCGATGAATG 60.075 42.308 0.00 0.00 0.00 2.67
4008 10988 7.702348 CAGTAGTAGAATGTGTCGATGAATGAA 59.298 37.037 0.00 0.00 0.00 2.57
4009 10989 8.417106 AGTAGTAGAATGTGTCGATGAATGAAT 58.583 33.333 0.00 0.00 0.00 2.57
4010 10990 7.474398 AGTAGAATGTGTCGATGAATGAATG 57.526 36.000 0.00 0.00 0.00 2.67
4011 10991 7.267857 AGTAGAATGTGTCGATGAATGAATGA 58.732 34.615 0.00 0.00 0.00 2.57
4012 10992 6.990341 AGAATGTGTCGATGAATGAATGAA 57.010 33.333 0.00 0.00 0.00 2.57
4014 10994 7.415229 AGAATGTGTCGATGAATGAATGAATG 58.585 34.615 0.00 0.00 0.00 2.67
4015 10995 5.488645 TGTGTCGATGAATGAATGAATGG 57.511 39.130 0.00 0.00 0.00 3.16
4016 10996 5.184711 TGTGTCGATGAATGAATGAATGGA 58.815 37.500 0.00 0.00 0.00 3.41
4018 10998 6.991531 TGTGTCGATGAATGAATGAATGGATA 59.008 34.615 0.00 0.00 0.00 2.59
4019 10999 7.662669 TGTGTCGATGAATGAATGAATGGATAT 59.337 33.333 0.00 0.00 0.00 1.63
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
475 655 8.650143 AACTATATTTGGGAAAGACACACATT 57.350 30.769 0.00 0.00 0.00 2.71
771 1254 1.228154 ACAGACGGGGAAAGTTGGC 60.228 57.895 0.00 0.00 0.00 4.52
841 1369 1.063492 TGAGCGTACCTTGGGGATCTA 60.063 52.381 0.00 0.00 36.25 1.98
1216 3985 4.634004 TCGGTTGCACAGAATTCGATTATT 59.366 37.500 0.00 0.00 0.00 1.40
1268 4054 5.050490 CAGGATGGTCAGGTTAAGTAATCG 58.950 45.833 0.00 0.00 0.00 3.34
1323 4110 5.282055 TCATATTACAGACTTGGGAGCAG 57.718 43.478 0.00 0.00 0.00 4.24
1326 4113 8.725148 GCAAATATCATATTACAGACTTGGGAG 58.275 37.037 0.00 0.00 0.00 4.30
1328 4115 7.173218 ACGCAAATATCATATTACAGACTTGGG 59.827 37.037 0.00 0.00 0.00 4.12
1503 4315 1.783792 GAACAAAACACACACGCGCG 61.784 55.000 30.96 30.96 0.00 6.86
1507 4319 5.387279 ACTACAAAGAACAAAACACACACG 58.613 37.500 0.00 0.00 0.00 4.49
1595 4548 6.128282 TGTTGTTGTTGTTGTTGTTGTTGTTT 60.128 30.769 0.00 0.00 0.00 2.83
1616 4573 2.364970 TCAGGATGGGCAGTTTTTGTTG 59.635 45.455 0.00 0.00 36.16 3.33
1619 4576 1.068333 CGTCAGGATGGGCAGTTTTTG 60.068 52.381 0.00 0.00 36.16 2.44
1684 4647 6.150140 GCAAGGATGAGTAAACAGTCATTCTT 59.850 38.462 9.32 9.32 45.99 2.52
1851 4819 5.822519 AGAATTCAATTATCGCAGGCTACAA 59.177 36.000 8.44 0.00 0.00 2.41
1880 4851 3.247442 CATGCATGTTGCTGTTTCGATT 58.753 40.909 18.91 0.00 45.31 3.34
1881 4852 2.229543 ACATGCATGTTGCTGTTTCGAT 59.770 40.909 26.61 0.00 45.31 3.59
1882 4853 1.608109 ACATGCATGTTGCTGTTTCGA 59.392 42.857 26.61 0.00 45.31 3.71
1883 4854 1.717113 CACATGCATGTTGCTGTTTCG 59.283 47.619 29.48 11.33 45.31 3.46
1884 4855 2.727798 GACACATGCATGTTGCTGTTTC 59.272 45.455 29.48 12.75 45.31 2.78
1885 4856 2.363038 AGACACATGCATGTTGCTGTTT 59.637 40.909 29.48 16.17 45.31 2.83
1886 4857 1.958579 AGACACATGCATGTTGCTGTT 59.041 42.857 29.48 11.90 45.31 3.16
1887 4858 1.538512 GAGACACATGCATGTTGCTGT 59.461 47.619 29.48 22.97 45.31 4.40
1888 4859 1.810755 AGAGACACATGCATGTTGCTG 59.189 47.619 29.48 19.93 45.31 4.41
1889 4860 2.195741 AGAGACACATGCATGTTGCT 57.804 45.000 29.48 26.27 45.31 3.91
1890 4861 2.486982 AGAAGAGACACATGCATGTTGC 59.513 45.455 29.48 22.33 45.29 4.17
1891 4862 4.934001 AGTAGAAGAGACACATGCATGTTG 59.066 41.667 29.48 24.18 39.39 3.33
1892 4863 5.157940 AGTAGAAGAGACACATGCATGTT 57.842 39.130 29.48 19.82 39.39 2.71
1893 4864 4.815533 AGTAGAAGAGACACATGCATGT 57.184 40.909 26.61 26.61 42.84 3.21
1894 4865 8.877808 TTAATAGTAGAAGAGACACATGCATG 57.122 34.615 25.09 25.09 0.00 4.06
1895 4866 7.655328 GCTTAATAGTAGAAGAGACACATGCAT 59.345 37.037 0.00 0.00 0.00 3.96
1896 4867 6.980978 GCTTAATAGTAGAAGAGACACATGCA 59.019 38.462 0.00 0.00 0.00 3.96
1897 4868 6.422400 GGCTTAATAGTAGAAGAGACACATGC 59.578 42.308 0.00 0.00 0.00 4.06
1898 4869 7.436673 GTGGCTTAATAGTAGAAGAGACACATG 59.563 40.741 2.49 0.00 0.00 3.21
1899 4870 7.343316 AGTGGCTTAATAGTAGAAGAGACACAT 59.657 37.037 9.52 0.00 31.46 3.21
1900 4871 6.663953 AGTGGCTTAATAGTAGAAGAGACACA 59.336 38.462 9.52 0.00 31.46 3.72
1901 4872 7.102847 AGTGGCTTAATAGTAGAAGAGACAC 57.897 40.000 0.00 0.00 0.00 3.67
1902 4873 8.272889 TCTAGTGGCTTAATAGTAGAAGAGACA 58.727 37.037 0.00 0.00 0.00 3.41
1903 4874 8.562052 GTCTAGTGGCTTAATAGTAGAAGAGAC 58.438 40.741 0.00 0.00 32.34 3.36
1904 4875 8.496088 AGTCTAGTGGCTTAATAGTAGAAGAGA 58.504 37.037 0.00 0.00 32.34 3.10
1905 4876 8.685838 AGTCTAGTGGCTTAATAGTAGAAGAG 57.314 38.462 0.00 0.00 32.34 2.85
1916 4887 7.980099 GCTCTTGTTTATAGTCTAGTGGCTTAA 59.020 37.037 0.00 0.00 0.00 1.85
1917 4888 7.342284 AGCTCTTGTTTATAGTCTAGTGGCTTA 59.658 37.037 0.00 0.00 0.00 3.09
1918 4889 6.155393 AGCTCTTGTTTATAGTCTAGTGGCTT 59.845 38.462 0.00 0.00 0.00 4.35
2114 8070 5.506686 TGCAACTAATTACAGTGTTTGCA 57.493 34.783 21.14 21.14 0.00 4.08
2207 8163 5.312120 TCTGAGACAAGTAATTCTCGACC 57.688 43.478 0.00 0.00 41.13 4.79
2302 8258 0.324552 TCCCTCCGTCCCGAATTACA 60.325 55.000 0.00 0.00 0.00 2.41
2458 8540 2.777459 ATTCTGGACGGAGGGACTAT 57.223 50.000 0.00 0.00 41.55 2.12
2708 8803 2.631062 TCCAACCTCTTTAGCGTCTCAA 59.369 45.455 0.00 0.00 0.00 3.02
2756 8851 5.386958 TTCTACGTACTGCTTGAAGACAT 57.613 39.130 0.00 0.00 0.00 3.06
2763 8858 5.104562 TCCGATATTCTACGTACTGCTTG 57.895 43.478 0.00 0.00 0.00 4.01
2764 8859 4.215827 CCTCCGATATTCTACGTACTGCTT 59.784 45.833 0.00 0.00 0.00 3.91
2943 9058 0.752743 AGCAGAAGCAGCAACCACAA 60.753 50.000 0.00 0.00 45.49 3.33
2949 9064 1.878088 CAGAGAAAGCAGAAGCAGCAA 59.122 47.619 0.00 0.00 45.49 3.91
2957 9072 2.169352 GCCCACTATCAGAGAAAGCAGA 59.831 50.000 0.00 0.00 0.00 4.26
2970 9085 0.544697 CCTTGGTAACGGCCCACTAT 59.455 55.000 0.00 0.00 42.51 2.12
2971 9086 0.544833 TCCTTGGTAACGGCCCACTA 60.545 55.000 0.00 0.00 42.51 2.74
3100 9264 3.690628 CCATGTCACACAATATCACAGCA 59.309 43.478 0.00 0.00 0.00 4.41
3282 10112 3.863424 TCCATTTCTGCGACGAGTAATTC 59.137 43.478 0.00 0.00 0.00 2.17
3290 10120 3.384668 AGATACATCCATTTCTGCGACG 58.615 45.455 0.00 0.00 0.00 5.12
3294 10124 9.664332 AATACATCTAGATACATCCATTTCTGC 57.336 33.333 4.54 0.00 0.00 4.26
3320 10240 9.547753 GCAGAAATGGATGTATCTAGAAGTAAA 57.452 33.333 0.00 0.00 0.00 2.01
3321 10241 7.867909 CGCAGAAATGGATGTATCTAGAAGTAA 59.132 37.037 0.00 0.00 0.00 2.24
3325 10245 6.040955 AGTCGCAGAAATGGATGTATCTAGAA 59.959 38.462 0.00 0.00 39.69 2.10
3339 10259 7.117236 TCGTTTCAAATTACTAGTCGCAGAAAT 59.883 33.333 0.00 0.00 39.69 2.17
3345 10325 5.445540 CCCTTCGTTTCAAATTACTAGTCGC 60.446 44.000 0.00 0.00 0.00 5.19
3346 10326 5.865552 TCCCTTCGTTTCAAATTACTAGTCG 59.134 40.000 0.00 0.00 0.00 4.18
3350 10330 9.158233 CATTACTCCCTTCGTTTCAAATTACTA 57.842 33.333 0.00 0.00 0.00 1.82
3358 10338 4.039973 AGTGACATTACTCCCTTCGTTTCA 59.960 41.667 0.00 0.00 0.00 2.69
3360 10340 4.618920 AGTGACATTACTCCCTTCGTTT 57.381 40.909 0.00 0.00 0.00 3.60
3361 10341 4.771054 AGTAGTGACATTACTCCCTTCGTT 59.229 41.667 4.87 0.00 32.19 3.85
3364 10344 4.466726 ACCAGTAGTGACATTACTCCCTTC 59.533 45.833 7.61 0.00 32.19 3.46
3365 10345 4.426704 ACCAGTAGTGACATTACTCCCTT 58.573 43.478 7.61 0.00 32.19 3.95
3374 10354 9.383519 CACATATAAAGAAACCAGTAGTGACAT 57.616 33.333 0.00 0.00 0.00 3.06
3375 10355 7.822334 CCACATATAAAGAAACCAGTAGTGACA 59.178 37.037 0.00 0.00 0.00 3.58
3376 10356 7.822822 ACCACATATAAAGAAACCAGTAGTGAC 59.177 37.037 0.00 0.00 0.00 3.67
3378 10358 9.095065 GTACCACATATAAAGAAACCAGTAGTG 57.905 37.037 0.00 0.00 0.00 2.74
3379 10359 8.818860 TGTACCACATATAAAGAAACCAGTAGT 58.181 33.333 0.00 0.00 0.00 2.73
3380 10360 9.832445 ATGTACCACATATAAAGAAACCAGTAG 57.168 33.333 0.00 0.00 36.99 2.57
3381 10361 9.607988 CATGTACCACATATAAAGAAACCAGTA 57.392 33.333 0.00 0.00 36.53 2.74
3382 10362 7.067008 GCATGTACCACATATAAAGAAACCAGT 59.933 37.037 0.00 0.00 36.53 4.00
3383 10363 7.283127 AGCATGTACCACATATAAAGAAACCAG 59.717 37.037 0.00 0.00 36.53 4.00
3384 10364 7.116075 AGCATGTACCACATATAAAGAAACCA 58.884 34.615 0.00 0.00 36.53 3.67
3385 10365 7.568199 AGCATGTACCACATATAAAGAAACC 57.432 36.000 0.00 0.00 36.53 3.27
3388 10368 9.283768 CCAATAGCATGTACCACATATAAAGAA 57.716 33.333 0.00 0.00 36.53 2.52
3389 10369 8.436778 ACCAATAGCATGTACCACATATAAAGA 58.563 33.333 0.00 0.00 36.53 2.52
3390 10370 8.621532 ACCAATAGCATGTACCACATATAAAG 57.378 34.615 0.00 0.00 36.53 1.85
3393 10373 8.214364 TCAAACCAATAGCATGTACCACATATA 58.786 33.333 0.00 0.00 36.53 0.86
3394 10374 7.059788 TCAAACCAATAGCATGTACCACATAT 58.940 34.615 0.00 0.00 36.53 1.78
3395 10375 6.418946 TCAAACCAATAGCATGTACCACATA 58.581 36.000 0.00 0.00 36.53 2.29
3396 10376 5.260424 TCAAACCAATAGCATGTACCACAT 58.740 37.500 0.00 0.00 39.91 3.21
3397 10377 4.657013 TCAAACCAATAGCATGTACCACA 58.343 39.130 0.00 0.00 0.00 4.17
3398 10378 5.183140 ACTTCAAACCAATAGCATGTACCAC 59.817 40.000 0.00 0.00 0.00 4.16
3399 10379 5.182950 CACTTCAAACCAATAGCATGTACCA 59.817 40.000 0.00 0.00 0.00 3.25
3400 10380 5.183140 ACACTTCAAACCAATAGCATGTACC 59.817 40.000 0.00 0.00 0.00 3.34
3401 10381 6.254281 ACACTTCAAACCAATAGCATGTAC 57.746 37.500 0.00 0.00 0.00 2.90
3402 10382 6.488344 TCAACACTTCAAACCAATAGCATGTA 59.512 34.615 0.00 0.00 0.00 2.29
3403 10383 5.301551 TCAACACTTCAAACCAATAGCATGT 59.698 36.000 0.00 0.00 0.00 3.21
3404 10384 5.630680 GTCAACACTTCAAACCAATAGCATG 59.369 40.000 0.00 0.00 0.00 4.06
3405 10385 5.536161 AGTCAACACTTCAAACCAATAGCAT 59.464 36.000 0.00 0.00 0.00 3.79
3406 10386 4.887071 AGTCAACACTTCAAACCAATAGCA 59.113 37.500 0.00 0.00 0.00 3.49
3407 10387 5.438761 AGTCAACACTTCAAACCAATAGC 57.561 39.130 0.00 0.00 0.00 2.97
3408 10388 6.198966 GCAAAGTCAACACTTCAAACCAATAG 59.801 38.462 0.00 0.00 42.45 1.73
3412 10392 3.367910 GGCAAAGTCAACACTTCAAACCA 60.368 43.478 0.00 0.00 42.45 3.67
3413 10393 3.186909 GGCAAAGTCAACACTTCAAACC 58.813 45.455 0.00 0.00 42.45 3.27
3414 10394 3.186909 GGGCAAAGTCAACACTTCAAAC 58.813 45.455 0.00 0.00 42.45 2.93
3416 10396 2.451490 TGGGCAAAGTCAACACTTCAA 58.549 42.857 0.00 0.00 42.45 2.69
3419 10399 2.949447 AGATGGGCAAAGTCAACACTT 58.051 42.857 0.00 0.00 45.43 3.16
3420 10400 2.664402 AGATGGGCAAAGTCAACACT 57.336 45.000 0.00 0.00 0.00 3.55
3421 10401 4.846779 TTTAGATGGGCAAAGTCAACAC 57.153 40.909 0.00 0.00 0.00 3.32
3422 10402 6.418057 AAATTTAGATGGGCAAAGTCAACA 57.582 33.333 0.00 0.00 0.00 3.33
3423 10403 7.826690 TCTAAATTTAGATGGGCAAAGTCAAC 58.173 34.615 21.46 0.00 34.99 3.18
3424 10404 8.415950 TTCTAAATTTAGATGGGCAAAGTCAA 57.584 30.769 24.84 6.12 39.36 3.18
3425 10405 8.593945 ATTCTAAATTTAGATGGGCAAAGTCA 57.406 30.769 24.84 8.98 39.36 3.41
3426 10406 8.907885 AGATTCTAAATTTAGATGGGCAAAGTC 58.092 33.333 24.84 10.10 39.36 3.01
3427 10407 8.829373 AGATTCTAAATTTAGATGGGCAAAGT 57.171 30.769 24.84 2.09 39.36 2.66
3428 10408 9.525409 CAAGATTCTAAATTTAGATGGGCAAAG 57.475 33.333 24.84 9.70 39.36 2.77
3429 10409 9.034800 ACAAGATTCTAAATTTAGATGGGCAAA 57.965 29.630 24.84 11.35 39.36 3.68
3431 10411 8.055181 AGACAAGATTCTAAATTTAGATGGGCA 58.945 33.333 24.84 12.62 39.36 5.36
3432 10412 8.457238 AGACAAGATTCTAAATTTAGATGGGC 57.543 34.615 24.84 12.74 39.36 5.36
3433 10413 9.061435 GGAGACAAGATTCTAAATTTAGATGGG 57.939 37.037 24.84 15.98 39.36 4.00
3435 10415 9.061435 GGGGAGACAAGATTCTAAATTTAGATG 57.939 37.037 24.84 21.34 39.36 2.90
3436 10416 8.221251 GGGGGAGACAAGATTCTAAATTTAGAT 58.779 37.037 24.84 16.10 39.36 1.98
3437 10417 7.574607 GGGGGAGACAAGATTCTAAATTTAGA 58.425 38.462 21.46 21.46 37.97 2.10
3460 10440 0.322456 TCAAAGAATGCGTGGAGGGG 60.322 55.000 0.00 0.00 0.00 4.79
3461 10441 1.755179 ATCAAAGAATGCGTGGAGGG 58.245 50.000 0.00 0.00 0.00 4.30
3462 10442 5.505173 AAATATCAAAGAATGCGTGGAGG 57.495 39.130 0.00 0.00 0.00 4.30
3466 10446 6.324819 AGGTCAAAATATCAAAGAATGCGTG 58.675 36.000 0.00 0.00 0.00 5.34
3467 10447 6.515272 AGGTCAAAATATCAAAGAATGCGT 57.485 33.333 0.00 0.00 0.00 5.24
3468 10448 8.961092 CATTAGGTCAAAATATCAAAGAATGCG 58.039 33.333 0.00 0.00 0.00 4.73
3469 10449 9.252962 CCATTAGGTCAAAATATCAAAGAATGC 57.747 33.333 0.00 0.00 0.00 3.56
3470 10450 9.754382 CCCATTAGGTCAAAATATCAAAGAATG 57.246 33.333 0.00 0.00 0.00 2.67
3488 10468 6.697641 ACCACCATACTATTACCCATTAGG 57.302 41.667 0.00 0.00 43.78 2.69
3512 10492 8.741841 GGCCCCAAACGCTAAATTATATTATTA 58.258 33.333 0.00 0.00 0.00 0.98
3514 10494 6.153851 GGGCCCCAAACGCTAAATTATATTAT 59.846 38.462 12.23 0.00 0.00 1.28
3515 10495 5.477637 GGGCCCCAAACGCTAAATTATATTA 59.522 40.000 12.23 0.00 0.00 0.98
3516 10496 4.282449 GGGCCCCAAACGCTAAATTATATT 59.718 41.667 12.23 0.00 0.00 1.28
3517 10497 3.830178 GGGCCCCAAACGCTAAATTATAT 59.170 43.478 12.23 0.00 0.00 0.86
3518 10498 3.117436 AGGGCCCCAAACGCTAAATTATA 60.117 43.478 21.43 0.00 0.00 0.98
3519 10499 2.036387 GGGCCCCAAACGCTAAATTAT 58.964 47.619 12.23 0.00 0.00 1.28
3521 10501 0.252057 AGGGCCCCAAACGCTAAATT 60.252 50.000 21.43 0.00 0.00 1.82
3522 10502 0.683179 GAGGGCCCCAAACGCTAAAT 60.683 55.000 21.43 0.00 0.00 1.40
3524 10504 1.858739 ATGAGGGCCCCAAACGCTAA 61.859 55.000 21.43 0.00 0.00 3.09
3525 10505 2.265467 GATGAGGGCCCCAAACGCTA 62.265 60.000 21.43 0.00 0.00 4.26
3526 10506 3.645268 GATGAGGGCCCCAAACGCT 62.645 63.158 21.43 0.00 0.00 5.07
3527 10507 3.140814 GATGAGGGCCCCAAACGC 61.141 66.667 21.43 1.39 0.00 4.84
3528 10508 2.440247 GGATGAGGGCCCCAAACG 60.440 66.667 21.43 0.00 0.00 3.60
3529 10509 1.076705 GAGGATGAGGGCCCCAAAC 60.077 63.158 21.43 13.02 0.00 2.93
3532 10512 0.400525 CTAAGAGGATGAGGGCCCCA 60.401 60.000 21.43 17.33 0.00 4.96
3533 10513 0.400670 ACTAAGAGGATGAGGGCCCC 60.401 60.000 21.43 11.17 0.00 5.80
3534 10514 1.052617 GACTAAGAGGATGAGGGCCC 58.947 60.000 16.46 16.46 0.00 5.80
3535 10515 2.095604 AGACTAAGAGGATGAGGGCC 57.904 55.000 0.00 0.00 0.00 5.80
3536 10516 3.004944 CGTAAGACTAAGAGGATGAGGGC 59.995 52.174 0.00 0.00 43.02 5.19
3537 10517 3.570550 CCGTAAGACTAAGAGGATGAGGG 59.429 52.174 0.00 0.00 43.02 4.30
3538 10518 3.004944 GCCGTAAGACTAAGAGGATGAGG 59.995 52.174 0.00 0.00 43.02 3.86
3539 10519 3.004944 GGCCGTAAGACTAAGAGGATGAG 59.995 52.174 0.00 0.00 43.02 2.90
3540 10520 2.957006 GGCCGTAAGACTAAGAGGATGA 59.043 50.000 0.00 0.00 43.02 2.92
3541 10521 2.036089 GGGCCGTAAGACTAAGAGGATG 59.964 54.545 0.00 0.00 43.02 3.51
3542 10522 2.317973 GGGCCGTAAGACTAAGAGGAT 58.682 52.381 0.00 0.00 43.02 3.24
3543 10523 1.006281 TGGGCCGTAAGACTAAGAGGA 59.994 52.381 0.00 0.00 43.02 3.71
3544 10524 1.409427 CTGGGCCGTAAGACTAAGAGG 59.591 57.143 0.00 0.00 43.02 3.69
3545 10525 2.359531 CTCTGGGCCGTAAGACTAAGAG 59.640 54.545 0.00 0.00 43.02 2.85
3546 10526 2.376109 CTCTGGGCCGTAAGACTAAGA 58.624 52.381 0.00 0.00 43.02 2.10
3547 10527 1.202428 GCTCTGGGCCGTAAGACTAAG 60.202 57.143 0.00 0.00 43.02 2.18
3548 10528 0.822164 GCTCTGGGCCGTAAGACTAA 59.178 55.000 0.00 0.00 43.02 2.24
3549 10529 1.381928 CGCTCTGGGCCGTAAGACTA 61.382 60.000 0.00 0.00 37.74 2.59
3550 10530 2.711922 CGCTCTGGGCCGTAAGACT 61.712 63.158 0.00 0.00 37.74 3.24
3551 10531 2.202756 CGCTCTGGGCCGTAAGAC 60.203 66.667 0.00 0.00 37.74 3.01
3552 10532 3.458163 CCGCTCTGGGCCGTAAGA 61.458 66.667 0.00 0.00 37.74 2.10
3553 10533 3.310860 AACCGCTCTGGGCCGTAAG 62.311 63.158 0.00 0.00 44.64 2.34
3554 10534 3.315949 AACCGCTCTGGGCCGTAA 61.316 61.111 0.00 0.00 44.64 3.18
3555 10535 4.077184 CAACCGCTCTGGGCCGTA 62.077 66.667 0.00 0.00 44.64 4.02
3564 10544 2.130073 GACAAACAGGCCAACCGCTC 62.130 60.000 5.01 0.00 42.76 5.03
3565 10545 2.123897 ACAAACAGGCCAACCGCT 60.124 55.556 5.01 0.00 42.76 5.52
3566 10546 2.193536 AGACAAACAGGCCAACCGC 61.194 57.895 5.01 0.00 42.76 5.68
3567 10547 1.654220 CAGACAAACAGGCCAACCG 59.346 57.895 5.01 0.00 42.76 4.44
3568 10548 2.041153 CCAGACAAACAGGCCAACC 58.959 57.895 5.01 0.00 0.00 3.77
3569 10549 1.363807 GCCAGACAAACAGGCCAAC 59.636 57.895 5.01 0.00 43.95 3.77
3574 10554 1.683011 CCCATAGGCCAGACAAACAGG 60.683 57.143 5.01 0.00 0.00 4.00
3576 10556 3.976704 CCCATAGGCCAGACAAACA 57.023 52.632 5.01 0.00 0.00 2.83
3588 10568 0.179018 GTACCAAGGCAGGCCCATAG 60.179 60.000 6.70 0.00 36.58 2.23
3589 10569 1.641552 GGTACCAAGGCAGGCCCATA 61.642 60.000 7.15 0.00 36.58 2.74
3590 10570 2.683475 GTACCAAGGCAGGCCCAT 59.317 61.111 6.70 0.00 36.58 4.00
3591 10571 3.657350 GGTACCAAGGCAGGCCCA 61.657 66.667 7.15 0.00 36.58 5.36
3592 10572 4.796495 CGGTACCAAGGCAGGCCC 62.796 72.222 13.54 0.00 36.58 5.80
3593 10573 3.971109 GACGGTACCAAGGCAGGCC 62.971 68.421 13.54 0.97 0.00 5.19
3594 10574 2.436115 GACGGTACCAAGGCAGGC 60.436 66.667 13.54 0.00 0.00 4.85
3595 10575 2.125673 CGACGGTACCAAGGCAGG 60.126 66.667 13.54 0.00 0.00 4.85
3596 10576 2.125673 CCGACGGTACCAAGGCAG 60.126 66.667 13.54 0.00 0.00 4.85
3597 10577 3.697747 CCCGACGGTACCAAGGCA 61.698 66.667 13.94 0.00 0.00 4.75
3598 10578 4.462280 CCCCGACGGTACCAAGGC 62.462 72.222 13.94 0.00 0.00 4.35
3599 10579 2.999063 ACCCCGACGGTACCAAGG 60.999 66.667 13.94 11.27 45.97 3.61
3610 10590 4.051167 TACCGCCAGAGACCCCGA 62.051 66.667 0.00 0.00 0.00 5.14
3612 10592 3.155167 CCTACCGCCAGAGACCCC 61.155 72.222 0.00 0.00 0.00 4.95
3613 10593 2.578586 TACCCTACCGCCAGAGACCC 62.579 65.000 0.00 0.00 0.00 4.46
3614 10594 1.076485 TACCCTACCGCCAGAGACC 60.076 63.158 0.00 0.00 0.00 3.85
3615 10595 1.390383 GGTACCCTACCGCCAGAGAC 61.390 65.000 0.00 0.00 39.39 3.36
3616 10596 1.076485 GGTACCCTACCGCCAGAGA 60.076 63.158 0.00 0.00 39.39 3.10
3617 10597 3.534941 GGTACCCTACCGCCAGAG 58.465 66.667 0.00 0.00 39.39 3.35
3630 10610 3.119849 ACACGAACGGTACATAGTGGTAC 60.120 47.826 0.00 0.00 42.26 3.34
3632 10612 1.888512 ACACGAACGGTACATAGTGGT 59.111 47.619 0.00 0.00 34.28 4.16
3633 10613 2.642139 ACACGAACGGTACATAGTGG 57.358 50.000 0.00 0.00 34.28 4.00
3634 10614 4.232221 AGAAACACGAACGGTACATAGTG 58.768 43.478 0.00 0.00 35.89 2.74
3636 10616 4.498323 GCTAGAAACACGAACGGTACATAG 59.502 45.833 0.00 0.00 0.00 2.23
3639 10619 2.664916 GCTAGAAACACGAACGGTACA 58.335 47.619 0.00 0.00 0.00 2.90
3640 10620 1.645751 CGCTAGAAACACGAACGGTAC 59.354 52.381 0.00 0.00 0.00 3.34
3641 10621 1.401409 CCGCTAGAAACACGAACGGTA 60.401 52.381 0.00 0.00 34.61 4.02
3642 10622 0.665369 CCGCTAGAAACACGAACGGT 60.665 55.000 0.00 0.00 34.61 4.83
3643 10623 0.665369 ACCGCTAGAAACACGAACGG 60.665 55.000 0.00 0.00 44.49 4.44
3646 10626 1.888512 ACCTACCGCTAGAAACACGAA 59.111 47.619 0.00 0.00 0.00 3.85
3647 10627 1.470098 GACCTACCGCTAGAAACACGA 59.530 52.381 0.00 0.00 0.00 4.35
3648 10628 1.468736 GGACCTACCGCTAGAAACACG 60.469 57.143 0.00 0.00 0.00 4.49
3649 10629 2.290531 GGACCTACCGCTAGAAACAC 57.709 55.000 0.00 0.00 0.00 3.32
3661 10641 2.126189 GGCACGACACGGACCTAC 60.126 66.667 0.00 0.00 0.00 3.18
3662 10642 2.282674 AGGCACGACACGGACCTA 60.283 61.111 0.00 0.00 35.22 3.08
3663 10643 3.991051 CAGGCACGACACGGACCT 61.991 66.667 0.00 0.00 36.89 3.85
3683 10663 1.450134 TCAGCAGCTGCCATAACGG 60.450 57.895 34.39 15.17 43.38 4.44
3684 10664 1.020861 TGTCAGCAGCTGCCATAACG 61.021 55.000 34.39 16.03 43.38 3.18
3685 10665 1.065102 CATGTCAGCAGCTGCCATAAC 59.935 52.381 34.39 24.96 43.38 1.89
3687 10667 0.464916 CCATGTCAGCAGCTGCCATA 60.465 55.000 34.39 20.03 43.38 2.74
3688 10668 1.753078 CCATGTCAGCAGCTGCCAT 60.753 57.895 34.39 26.07 43.38 4.40
3689 10669 2.206182 ATCCATGTCAGCAGCTGCCA 62.206 55.000 34.39 25.03 43.38 4.92
3691 10671 1.602851 CTTATCCATGTCAGCAGCTGC 59.397 52.381 31.53 31.53 42.49 5.25
3692 10672 2.612672 CACTTATCCATGTCAGCAGCTG 59.387 50.000 17.10 17.10 0.00 4.24
3694 10674 2.611292 GTCACTTATCCATGTCAGCAGC 59.389 50.000 0.00 0.00 0.00 5.25
3695 10675 2.862536 CGTCACTTATCCATGTCAGCAG 59.137 50.000 0.00 0.00 0.00 4.24
3697 10677 1.594862 GCGTCACTTATCCATGTCAGC 59.405 52.381 0.00 0.00 0.00 4.26
3698 10678 3.119291 GAGCGTCACTTATCCATGTCAG 58.881 50.000 0.00 0.00 0.00 3.51
3700 10680 3.165058 TGAGCGTCACTTATCCATGTC 57.835 47.619 0.00 0.00 0.00 3.06
3701 10681 3.722147 GATGAGCGTCACTTATCCATGT 58.278 45.455 0.00 0.00 35.78 3.21
3706 10686 2.866762 GTTGGGATGAGCGTCACTTATC 59.133 50.000 0.00 0.00 39.98 1.75
3707 10687 2.501723 AGTTGGGATGAGCGTCACTTAT 59.498 45.455 0.00 0.00 0.00 1.73
3708 10688 1.899814 AGTTGGGATGAGCGTCACTTA 59.100 47.619 0.00 0.00 0.00 2.24
3709 10689 0.687354 AGTTGGGATGAGCGTCACTT 59.313 50.000 0.00 0.00 0.00 3.16
3710 10690 0.036952 CAGTTGGGATGAGCGTCACT 60.037 55.000 0.00 0.00 0.00 3.41
3711 10691 0.320771 ACAGTTGGGATGAGCGTCAC 60.321 55.000 0.00 0.00 0.00 3.67
3712 10692 0.396435 AACAGTTGGGATGAGCGTCA 59.604 50.000 0.00 0.00 0.00 4.35
3713 10693 1.197721 CAAACAGTTGGGATGAGCGTC 59.802 52.381 0.00 0.00 0.00 5.19
3724 10704 4.083377 GCCAATAAAATGCCCAAACAGTTG 60.083 41.667 0.00 0.00 34.25 3.16
3725 10705 4.071423 GCCAATAAAATGCCCAAACAGTT 58.929 39.130 0.00 0.00 0.00 3.16
3727 10707 2.672381 CGCCAATAAAATGCCCAAACAG 59.328 45.455 0.00 0.00 0.00 3.16
3730 10710 1.902508 TCCGCCAATAAAATGCCCAAA 59.097 42.857 0.00 0.00 0.00 3.28
3731 10711 1.561643 TCCGCCAATAAAATGCCCAA 58.438 45.000 0.00 0.00 0.00 4.12
3732 10712 1.686052 GATCCGCCAATAAAATGCCCA 59.314 47.619 0.00 0.00 0.00 5.36
3733 10713 1.963515 AGATCCGCCAATAAAATGCCC 59.036 47.619 0.00 0.00 0.00 5.36
3734 10714 3.383761 CAAGATCCGCCAATAAAATGCC 58.616 45.455 0.00 0.00 0.00 4.40
3735 10715 3.068024 TCCAAGATCCGCCAATAAAATGC 59.932 43.478 0.00 0.00 0.00 3.56
3736 10716 4.794003 GCTCCAAGATCCGCCAATAAAATG 60.794 45.833 0.00 0.00 0.00 2.32
3737 10717 3.319122 GCTCCAAGATCCGCCAATAAAAT 59.681 43.478 0.00 0.00 0.00 1.82
3738 10718 2.687935 GCTCCAAGATCCGCCAATAAAA 59.312 45.455 0.00 0.00 0.00 1.52
3739 10719 2.297701 GCTCCAAGATCCGCCAATAAA 58.702 47.619 0.00 0.00 0.00 1.40
3741 10721 0.108585 GGCTCCAAGATCCGCCAATA 59.891 55.000 0.00 0.00 42.06 1.90
3742 10722 1.152881 GGCTCCAAGATCCGCCAAT 60.153 57.895 0.00 0.00 42.06 3.16
3743 10723 2.272146 GGCTCCAAGATCCGCCAA 59.728 61.111 0.00 0.00 42.06 4.52
3745 10725 0.965363 TTTTGGCTCCAAGATCCGCC 60.965 55.000 1.26 0.00 42.78 6.13
3746 10726 1.106285 ATTTTGGCTCCAAGATCCGC 58.894 50.000 1.26 0.00 37.24 5.54
3747 10727 2.368439 TCATTTTGGCTCCAAGATCCG 58.632 47.619 2.08 0.00 37.24 4.18
3748 10728 4.019174 TCTTCATTTTGGCTCCAAGATCC 58.981 43.478 2.08 0.00 37.24 3.36
3749 10729 4.439837 GCTCTTCATTTTGGCTCCAAGATC 60.440 45.833 2.08 0.00 37.24 2.75
3754 10734 2.291209 TGCTCTTCATTTTGGCTCCA 57.709 45.000 0.00 0.00 0.00 3.86
3755 10735 2.094338 CCTTGCTCTTCATTTTGGCTCC 60.094 50.000 0.00 0.00 0.00 4.70
3756 10736 2.560105 ACCTTGCTCTTCATTTTGGCTC 59.440 45.455 0.00 0.00 0.00 4.70
3757 10737 2.601905 ACCTTGCTCTTCATTTTGGCT 58.398 42.857 0.00 0.00 0.00 4.75
3758 10738 4.519540 TTACCTTGCTCTTCATTTTGGC 57.480 40.909 0.00 0.00 0.00 4.52
3759 10739 6.405176 GGAGATTACCTTGCTCTTCATTTTGG 60.405 42.308 0.00 0.00 0.00 3.28
3760 10740 6.151648 TGGAGATTACCTTGCTCTTCATTTTG 59.848 38.462 0.00 0.00 0.00 2.44
3761 10741 6.248433 TGGAGATTACCTTGCTCTTCATTTT 58.752 36.000 0.00 0.00 0.00 1.82
3765 10745 4.141620 GGATGGAGATTACCTTGCTCTTCA 60.142 45.833 0.00 0.00 0.00 3.02
3766 10746 4.102367 AGGATGGAGATTACCTTGCTCTTC 59.898 45.833 0.00 0.00 32.21 2.87
3769 10749 4.429854 AAGGATGGAGATTACCTTGCTC 57.570 45.455 0.00 0.00 40.59 4.26
3770 10750 4.684485 CGAAAGGATGGAGATTACCTTGCT 60.684 45.833 0.00 0.00 41.14 3.91
3771 10751 3.561725 CGAAAGGATGGAGATTACCTTGC 59.438 47.826 0.00 0.00 41.14 4.01
3773 10753 4.141688 GGACGAAAGGATGGAGATTACCTT 60.142 45.833 0.00 0.00 43.40 3.50
3775 10755 3.134081 TGGACGAAAGGATGGAGATTACC 59.866 47.826 0.00 0.00 0.00 2.85
3776 10756 4.402056 TGGACGAAAGGATGGAGATTAC 57.598 45.455 0.00 0.00 0.00 1.89
3777 10757 5.630415 ATTGGACGAAAGGATGGAGATTA 57.370 39.130 0.00 0.00 0.00 1.75
3778 10758 4.510167 ATTGGACGAAAGGATGGAGATT 57.490 40.909 0.00 0.00 0.00 2.40
3779 10759 4.510167 AATTGGACGAAAGGATGGAGAT 57.490 40.909 0.00 0.00 0.00 2.75
3781 10761 5.391312 AAAAATTGGACGAAAGGATGGAG 57.609 39.130 0.00 0.00 0.00 3.86
3873 10853 1.112315 ATGCAACAGCCCGTTCCAAA 61.112 50.000 0.00 0.00 34.86 3.28
3874 10854 1.112315 AATGCAACAGCCCGTTCCAA 61.112 50.000 0.00 0.00 34.86 3.53
3875 10855 1.112315 AAATGCAACAGCCCGTTCCA 61.112 50.000 0.00 0.00 34.86 3.53
3876 10856 0.885196 TAAATGCAACAGCCCGTTCC 59.115 50.000 0.00 0.00 34.86 3.62
3877 10857 2.715737 TTAAATGCAACAGCCCGTTC 57.284 45.000 0.00 0.00 34.86 3.95
3879 10859 2.101582 TGTTTTAAATGCAACAGCCCGT 59.898 40.909 0.00 0.00 0.00 5.28
3880 10860 2.474735 GTGTTTTAAATGCAACAGCCCG 59.525 45.455 0.00 0.00 33.55 6.13
3881 10861 3.727726 AGTGTTTTAAATGCAACAGCCC 58.272 40.909 0.00 0.00 33.55 5.19
3883 10863 8.020819 TCTACATAGTGTTTTAAATGCAACAGC 58.979 33.333 0.00 0.00 33.55 4.40
3884 10864 9.891828 TTCTACATAGTGTTTTAAATGCAACAG 57.108 29.630 0.00 0.00 33.55 3.16
3885 10865 9.672086 GTTCTACATAGTGTTTTAAATGCAACA 57.328 29.630 0.00 0.00 0.00 3.33
3886 10866 9.124807 GGTTCTACATAGTGTTTTAAATGCAAC 57.875 33.333 0.00 0.00 0.00 4.17
3887 10867 8.301002 GGGTTCTACATAGTGTTTTAAATGCAA 58.699 33.333 0.00 0.00 0.00 4.08
3888 10868 7.668052 AGGGTTCTACATAGTGTTTTAAATGCA 59.332 33.333 0.00 0.00 0.00 3.96
3889 10869 8.051901 AGGGTTCTACATAGTGTTTTAAATGC 57.948 34.615 0.00 0.00 0.00 3.56
3894 10874 9.895138 GGAAATAGGGTTCTACATAGTGTTTTA 57.105 33.333 0.00 0.00 0.00 1.52
3895 10875 8.612145 AGGAAATAGGGTTCTACATAGTGTTTT 58.388 33.333 0.00 0.00 0.00 2.43
3896 10876 8.159229 AGGAAATAGGGTTCTACATAGTGTTT 57.841 34.615 0.00 0.00 0.00 2.83
3897 10877 7.402071 TGAGGAAATAGGGTTCTACATAGTGTT 59.598 37.037 0.00 0.00 0.00 3.32
3898 10878 6.901300 TGAGGAAATAGGGTTCTACATAGTGT 59.099 38.462 0.00 0.00 0.00 3.55
3899 10879 7.361457 TGAGGAAATAGGGTTCTACATAGTG 57.639 40.000 0.00 0.00 0.00 2.74
3900 10880 7.624077 AGTTGAGGAAATAGGGTTCTACATAGT 59.376 37.037 0.00 0.00 0.00 2.12
3903 10883 6.893020 AGTTGAGGAAATAGGGTTCTACAT 57.107 37.500 0.00 0.00 0.00 2.29
3904 10884 6.043938 ACAAGTTGAGGAAATAGGGTTCTACA 59.956 38.462 10.54 0.00 0.00 2.74
3905 10885 6.473758 ACAAGTTGAGGAAATAGGGTTCTAC 58.526 40.000 10.54 0.00 0.00 2.59
3906 10886 6.697641 ACAAGTTGAGGAAATAGGGTTCTA 57.302 37.500 10.54 0.00 0.00 2.10
3908 10888 5.048013 CCAACAAGTTGAGGAAATAGGGTTC 60.048 44.000 10.54 0.00 42.93 3.62
3909 10889 4.832823 CCAACAAGTTGAGGAAATAGGGTT 59.167 41.667 10.54 0.00 42.93 4.11
3911 10891 4.662278 TCCAACAAGTTGAGGAAATAGGG 58.338 43.478 10.54 0.00 42.93 3.53
3912 10892 6.648879 TTTCCAACAAGTTGAGGAAATAGG 57.351 37.500 27.73 12.47 42.93 2.57
3916 10896 8.477419 AGATAATTTCCAACAAGTTGAGGAAA 57.523 30.769 30.62 30.62 43.35 3.13
3917 10897 7.176690 GGAGATAATTTCCAACAAGTTGAGGAA 59.823 37.037 22.11 22.11 42.93 3.36
3918 10898 6.659242 GGAGATAATTTCCAACAAGTTGAGGA 59.341 38.462 10.54 13.22 42.93 3.71
3919 10899 6.434028 TGGAGATAATTTCCAACAAGTTGAGG 59.566 38.462 10.54 11.03 41.61 3.86
3920 10900 7.452880 TGGAGATAATTTCCAACAAGTTGAG 57.547 36.000 10.54 1.41 41.61 3.02
3934 10914 9.927668 CAACCACACTTTAAAATGGAGATAATT 57.072 29.630 16.08 0.00 36.04 1.40
3936 10916 8.472007 ACAACCACACTTTAAAATGGAGATAA 57.528 30.769 16.08 0.00 36.04 1.75
3939 10919 6.153680 ACAACAACCACACTTTAAAATGGAGA 59.846 34.615 16.08 0.00 36.04 3.71
3940 10920 6.255453 CACAACAACCACACTTTAAAATGGAG 59.745 38.462 16.08 11.41 36.04 3.86
3942 10922 5.872070 ACACAACAACCACACTTTAAAATGG 59.128 36.000 1.28 6.46 38.26 3.16
3943 10923 6.959671 ACACAACAACCACACTTTAAAATG 57.040 33.333 0.00 0.00 0.00 2.32
3945 10925 6.761714 ACAAACACAACAACCACACTTTAAAA 59.238 30.769 0.00 0.00 0.00 1.52
3947 10927 5.692204 CACAAACACAACAACCACACTTTAA 59.308 36.000 0.00 0.00 0.00 1.52
3949 10929 4.054671 CACAAACACAACAACCACACTTT 58.945 39.130 0.00 0.00 0.00 2.66
3951 10931 2.625790 ACACAAACACAACAACCACACT 59.374 40.909 0.00 0.00 0.00 3.55
3952 10932 3.019933 ACACAAACACAACAACCACAC 57.980 42.857 0.00 0.00 0.00 3.82
3953 10933 4.848562 TTACACAAACACAACAACCACA 57.151 36.364 0.00 0.00 0.00 4.17
3955 10935 7.334844 TCATATTACACAAACACAACAACCA 57.665 32.000 0.00 0.00 0.00 3.67
3956 10936 6.861055 CCTCATATTACACAAACACAACAACC 59.139 38.462 0.00 0.00 0.00 3.77
3957 10937 6.362283 GCCTCATATTACACAAACACAACAAC 59.638 38.462 0.00 0.00 0.00 3.32
3958 10938 6.039829 TGCCTCATATTACACAAACACAACAA 59.960 34.615 0.00 0.00 0.00 2.83
3959 10939 5.532779 TGCCTCATATTACACAAACACAACA 59.467 36.000 0.00 0.00 0.00 3.33
3960 10940 6.007936 TGCCTCATATTACACAAACACAAC 57.992 37.500 0.00 0.00 0.00 3.32
3963 10943 5.880054 ACTGCCTCATATTACACAAACAC 57.120 39.130 0.00 0.00 0.00 3.32
3965 10945 8.195436 TCTACTACTGCCTCATATTACACAAAC 58.805 37.037 0.00 0.00 0.00 2.93
3966 10946 8.301252 TCTACTACTGCCTCATATTACACAAA 57.699 34.615 0.00 0.00 0.00 2.83
3967 10947 7.891498 TCTACTACTGCCTCATATTACACAA 57.109 36.000 0.00 0.00 0.00 3.33
3969 10949 8.361139 ACATTCTACTACTGCCTCATATTACAC 58.639 37.037 0.00 0.00 0.00 2.90
3970 10950 8.360390 CACATTCTACTACTGCCTCATATTACA 58.640 37.037 0.00 0.00 0.00 2.41
3971 10951 8.361139 ACACATTCTACTACTGCCTCATATTAC 58.639 37.037 0.00 0.00 0.00 1.89
3973 10953 7.366847 ACACATTCTACTACTGCCTCATATT 57.633 36.000 0.00 0.00 0.00 1.28
3974 10954 6.294231 CGACACATTCTACTACTGCCTCATAT 60.294 42.308 0.00 0.00 0.00 1.78
3975 10955 5.008712 CGACACATTCTACTACTGCCTCATA 59.991 44.000 0.00 0.00 0.00 2.15
3976 10956 4.202060 CGACACATTCTACTACTGCCTCAT 60.202 45.833 0.00 0.00 0.00 2.90
3979 10959 3.353557 TCGACACATTCTACTACTGCCT 58.646 45.455 0.00 0.00 0.00 4.75
3980 10960 3.777465 TCGACACATTCTACTACTGCC 57.223 47.619 0.00 0.00 0.00 4.85
3981 10961 4.921547 TCATCGACACATTCTACTACTGC 58.078 43.478 0.00 0.00 0.00 4.40
3982 10962 7.196331 TCATTCATCGACACATTCTACTACTG 58.804 38.462 0.00 0.00 0.00 2.74
3983 10963 7.334844 TCATTCATCGACACATTCTACTACT 57.665 36.000 0.00 0.00 0.00 2.57
3984 10964 7.987268 TTCATTCATCGACACATTCTACTAC 57.013 36.000 0.00 0.00 0.00 2.73
3986 10966 7.267857 TCATTCATTCATCGACACATTCTACT 58.732 34.615 0.00 0.00 0.00 2.57
3987 10967 7.468922 TCATTCATTCATCGACACATTCTAC 57.531 36.000 0.00 0.00 0.00 2.59
3989 10969 6.990341 TTCATTCATTCATCGACACATTCT 57.010 33.333 0.00 0.00 0.00 2.40
3992 10972 5.824097 TCCATTCATTCATTCATCGACACAT 59.176 36.000 0.00 0.00 0.00 3.21
3993 10973 5.184711 TCCATTCATTCATTCATCGACACA 58.815 37.500 0.00 0.00 0.00 3.72


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.