Multiple sequence alignment - TraesCS1D01G447500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G447500 chr1D 100.000 3138 0 0 1 3138 490123224 490120087 0.000000e+00 5795.0
1 TraesCS1D01G447500 chr1D 89.764 508 46 3 1986 2492 488758256 488758758 0.000000e+00 645.0
2 TraesCS1D01G447500 chr1D 86.696 451 50 6 1545 1994 488756674 488757115 2.810000e-135 492.0
3 TraesCS1D01G447500 chr1D 87.607 234 20 6 710 934 488754379 488754612 2.400000e-66 263.0
4 TraesCS1D01G447500 chr1D 89.241 158 11 1 974 1131 488754611 488754762 3.190000e-45 193.0
5 TraesCS1D01G447500 chr1D 85.714 119 11 6 1314 1429 299925839 299925724 1.530000e-23 121.0
6 TraesCS1D01G447500 chr1B 88.914 902 76 14 1545 2436 680998522 680997635 0.000000e+00 1090.0
7 TraesCS1D01G447500 chr1B 88.056 854 81 13 1545 2386 681001618 681000774 0.000000e+00 992.0
8 TraesCS1D01G447500 chr1B 88.732 355 32 3 977 1324 681002034 681001681 8.040000e-116 427.0
9 TraesCS1D01G447500 chr1B 92.135 178 8 2 972 1143 680999078 680998901 2.420000e-61 246.0
10 TraesCS1D01G447500 chr1B 83.051 236 32 7 710 939 681002265 681002032 1.140000e-49 207.0
11 TraesCS1D01G447500 chr1B 79.503 322 28 11 1253 1546 680998903 680998592 8.880000e-46 195.0
12 TraesCS1D01G447500 chr1B 93.077 130 8 1 2977 3106 680996038 680995910 4.130000e-44 189.0
13 TraesCS1D01G447500 chr1B 93.103 87 5 1 2865 2951 452010329 452010244 3.290000e-25 126.0
14 TraesCS1D01G447500 chr1B 93.671 79 5 0 2875 2953 680996195 680996117 5.500000e-23 119.0
15 TraesCS1D01G447500 chr1B 90.476 84 4 1 2769 2848 583145382 583145299 1.190000e-19 108.0
16 TraesCS1D01G447500 chr1B 78.947 133 14 6 803 934 680999194 680999075 9.330000e-11 78.7
17 TraesCS1D01G447500 chr1A 88.517 688 69 6 1545 2231 588015603 588016281 0.000000e+00 824.0
18 TraesCS1D01G447500 chr1A 87.030 532 40 9 2116 2619 588258937 588259467 9.760000e-160 573.0
19 TraesCS1D01G447500 chr1A 86.207 551 44 11 2443 2985 588016283 588016809 4.540000e-158 568.0
20 TraesCS1D01G447500 chr1A 83.838 99 16 0 1436 1534 587930051 587930149 9.270000e-16 95.3
21 TraesCS1D01G447500 chr1A 78.667 150 27 5 1546 1693 588492389 588492243 9.270000e-16 95.3
22 TraesCS1D01G447500 chr6B 89.091 110 8 4 1314 1422 119827851 119827745 1.960000e-27 134.0
23 TraesCS1D01G447500 chr6B 87.156 109 10 4 1314 1421 119827756 119827861 1.530000e-23 121.0
24 TraesCS1D01G447500 chr6B 89.362 94 9 1 2859 2952 549736629 549736721 1.980000e-22 117.0
25 TraesCS1D01G447500 chr5B 87.500 112 9 4 1314 1424 576921355 576921248 1.180000e-24 124.0
26 TraesCS1D01G447500 chr5B 88.073 109 8 4 1314 1421 576921261 576921365 1.180000e-24 124.0
27 TraesCS1D01G447500 chr5B 88.158 76 7 2 2768 2842 613111177 613111103 4.310000e-14 89.8
28 TraesCS1D01G447500 chr5B 88.136 59 7 0 2787 2845 317884322 317884380 1.560000e-08 71.3
29 TraesCS1D01G447500 chr4B 87.963 108 9 3 1314 1421 591136190 591136293 1.180000e-24 124.0
30 TraesCS1D01G447500 chrUn 91.954 87 7 0 2865 2951 247027249 247027335 4.250000e-24 122.0
31 TraesCS1D01G447500 chr3B 84.800 125 14 4 1314 1437 761883172 761883052 1.530000e-23 121.0
32 TraesCS1D01G447500 chr3A 86.607 112 9 4 1314 1421 171206254 171206145 5.500000e-23 119.0
33 TraesCS1D01G447500 chr7A 86.486 111 10 4 1314 1421 658988958 658989066 1.980000e-22 117.0
34 TraesCS1D01G447500 chr7D 89.362 94 7 3 2859 2951 305153705 305153796 7.110000e-22 115.0
35 TraesCS1D01G447500 chr2A 90.805 87 7 1 2865 2951 326241312 326241227 7.110000e-22 115.0
36 TraesCS1D01G447500 chr3D 86.486 111 6 2 2769 2871 501788323 501788214 2.560000e-21 113.0
37 TraesCS1D01G447500 chr2B 89.130 92 7 3 2861 2951 131202862 131202951 9.200000e-21 111.0
38 TraesCS1D01G447500 chr2B 88.298 94 8 3 2862 2954 668045066 668044975 3.310000e-20 110.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G447500 chr1D 490120087 490123224 3137 True 5795.000000 5795 100.000000 1 3138 1 chr1D.!!$R2 3137
1 TraesCS1D01G447500 chr1D 488754379 488758758 4379 False 398.250000 645 88.327000 710 2492 4 chr1D.!!$F1 1782
2 TraesCS1D01G447500 chr1B 680995910 681002265 6355 True 393.744444 1090 87.342889 710 3106 9 chr1B.!!$R3 2396
3 TraesCS1D01G447500 chr1A 588015603 588016809 1206 False 696.000000 824 87.362000 1545 2985 2 chr1A.!!$F3 1440
4 TraesCS1D01G447500 chr1A 588258937 588259467 530 False 573.000000 573 87.030000 2116 2619 1 chr1A.!!$F2 503

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
127 128 0.035598 CCACCACACGTCCACCATAA 59.964 55.0 0.0 0.0 0.0 1.90 F
559 560 0.040646 TCGGGTGAGAGGAGCCTTTA 59.959 55.0 0.0 0.0 0.0 1.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1815 6199 0.034476 AACGACTTTCCCCCGAGAAC 59.966 55.0 0.0 0.0 0.0 3.01 R
2195 7739 0.890683 GTAGTGCCAGCAAGCCAAAT 59.109 50.0 0.0 0.0 0.0 2.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 2.826337 CTCCCACAGGATCATCCGA 58.174 57.895 0.00 0.00 42.93 4.55
24 25 1.346062 CTCCCACAGGATCATCCGAT 58.654 55.000 0.00 0.00 42.93 4.18
25 26 1.696336 CTCCCACAGGATCATCCGATT 59.304 52.381 0.00 0.00 42.93 3.34
26 27 1.417517 TCCCACAGGATCATCCGATTG 59.582 52.381 0.00 0.00 42.75 2.67
27 28 1.417517 CCCACAGGATCATCCGATTGA 59.582 52.381 0.00 0.00 42.75 2.57
28 29 2.487934 CCACAGGATCATCCGATTGAC 58.512 52.381 0.00 0.00 42.75 3.18
29 30 2.130395 CACAGGATCATCCGATTGACG 58.870 52.381 0.00 0.00 42.75 4.35
38 39 4.147322 CGATTGACGGCGCACCAC 62.147 66.667 10.83 0.00 38.46 4.16
39 40 2.742372 GATTGACGGCGCACCACT 60.742 61.111 10.83 0.00 34.57 4.00
40 41 2.740714 GATTGACGGCGCACCACTC 61.741 63.158 10.83 3.65 34.57 3.51
56 57 3.702048 TCGGGCCCGAGGTTCTTG 61.702 66.667 42.66 12.44 44.01 3.02
57 58 3.702048 CGGGCCCGAGGTTCTTGA 61.702 66.667 41.82 0.00 42.83 3.02
58 59 2.046217 GGGCCCGAGGTTCTTGAC 60.046 66.667 5.69 0.00 0.00 3.18
59 60 2.593956 GGGCCCGAGGTTCTTGACT 61.594 63.158 5.69 0.00 0.00 3.41
60 61 1.375326 GGCCCGAGGTTCTTGACTT 59.625 57.895 0.00 0.00 0.00 3.01
61 62 0.673956 GGCCCGAGGTTCTTGACTTC 60.674 60.000 0.00 0.00 0.00 3.01
62 63 0.321996 GCCCGAGGTTCTTGACTTCT 59.678 55.000 0.00 0.00 32.50 2.85
63 64 1.270893 GCCCGAGGTTCTTGACTTCTT 60.271 52.381 0.00 0.00 32.50 2.52
64 65 2.689646 CCCGAGGTTCTTGACTTCTTC 58.310 52.381 0.00 0.00 32.50 2.87
65 66 2.329379 CCGAGGTTCTTGACTTCTTCG 58.671 52.381 0.00 0.00 32.50 3.79
66 67 2.030185 CCGAGGTTCTTGACTTCTTCGA 60.030 50.000 0.00 0.00 32.50 3.71
67 68 3.367498 CCGAGGTTCTTGACTTCTTCGAT 60.367 47.826 0.00 0.00 32.50 3.59
68 69 3.610242 CGAGGTTCTTGACTTCTTCGATG 59.390 47.826 0.00 0.00 32.50 3.84
69 70 4.561105 GAGGTTCTTGACTTCTTCGATGT 58.439 43.478 0.00 0.00 32.00 3.06
70 71 4.962155 AGGTTCTTGACTTCTTCGATGTT 58.038 39.130 0.00 0.00 0.00 2.71
71 72 4.752101 AGGTTCTTGACTTCTTCGATGTTG 59.248 41.667 0.00 0.00 0.00 3.33
72 73 4.458708 GTTCTTGACTTCTTCGATGTTGC 58.541 43.478 0.00 0.00 0.00 4.17
73 74 3.067106 TCTTGACTTCTTCGATGTTGCC 58.933 45.455 0.00 0.00 0.00 4.52
74 75 2.542020 TGACTTCTTCGATGTTGCCA 57.458 45.000 0.00 0.00 0.00 4.92
75 76 3.057969 TGACTTCTTCGATGTTGCCAT 57.942 42.857 0.00 0.00 0.00 4.40
76 77 3.411446 TGACTTCTTCGATGTTGCCATT 58.589 40.909 0.00 0.00 0.00 3.16
77 78 3.189080 TGACTTCTTCGATGTTGCCATTG 59.811 43.478 0.00 0.00 34.25 2.82
78 79 3.149196 ACTTCTTCGATGTTGCCATTGT 58.851 40.909 0.00 0.00 34.54 2.71
79 80 3.189287 ACTTCTTCGATGTTGCCATTGTC 59.811 43.478 0.00 0.00 34.54 3.18
80 81 1.731709 TCTTCGATGTTGCCATTGTCG 59.268 47.619 0.00 0.00 34.54 4.35
81 82 1.464608 CTTCGATGTTGCCATTGTCGT 59.535 47.619 0.00 0.00 34.54 4.34
82 83 0.795698 TCGATGTTGCCATTGTCGTG 59.204 50.000 0.00 0.00 34.54 4.35
83 84 0.179192 CGATGTTGCCATTGTCGTGG 60.179 55.000 0.00 0.00 42.35 4.94
90 91 3.065575 CCATTGTCGTGGCTAGACC 57.934 57.895 0.00 0.00 37.80 3.85
91 92 0.537188 CCATTGTCGTGGCTAGACCT 59.463 55.000 0.00 0.00 40.22 3.85
92 93 1.645034 CATTGTCGTGGCTAGACCTG 58.355 55.000 0.00 4.96 40.22 4.00
93 94 0.537188 ATTGTCGTGGCTAGACCTGG 59.463 55.000 0.00 0.00 40.22 4.45
94 95 2.167398 TTGTCGTGGCTAGACCTGGC 62.167 60.000 0.00 0.00 40.22 4.85
100 101 4.645809 GCTAGACCTGGCCTTTGG 57.354 61.111 3.32 6.37 0.00 3.28
118 119 4.697756 CGATGCCCCACCACACGT 62.698 66.667 0.00 0.00 0.00 4.49
119 120 2.746277 GATGCCCCACCACACGTC 60.746 66.667 0.00 0.00 0.00 4.34
120 121 4.344865 ATGCCCCACCACACGTCC 62.345 66.667 0.00 0.00 0.00 4.79
123 124 4.636435 CCCCACCACACGTCCACC 62.636 72.222 0.00 0.00 0.00 4.61
124 125 3.867783 CCCACCACACGTCCACCA 61.868 66.667 0.00 0.00 0.00 4.17
125 126 2.429930 CCACCACACGTCCACCAT 59.570 61.111 0.00 0.00 0.00 3.55
126 127 1.674637 CCACCACACGTCCACCATA 59.325 57.895 0.00 0.00 0.00 2.74
127 128 0.035598 CCACCACACGTCCACCATAA 59.964 55.000 0.00 0.00 0.00 1.90
128 129 1.339631 CCACCACACGTCCACCATAAT 60.340 52.381 0.00 0.00 0.00 1.28
129 130 1.737236 CACCACACGTCCACCATAATG 59.263 52.381 0.00 0.00 0.00 1.90
130 131 0.732571 CCACACGTCCACCATAATGC 59.267 55.000 0.00 0.00 0.00 3.56
131 132 0.732571 CACACGTCCACCATAATGCC 59.267 55.000 0.00 0.00 0.00 4.40
132 133 0.393808 ACACGTCCACCATAATGCCC 60.394 55.000 0.00 0.00 0.00 5.36
133 134 1.153249 ACGTCCACCATAATGCCCG 60.153 57.895 0.00 0.00 0.00 6.13
134 135 2.542907 CGTCCACCATAATGCCCGC 61.543 63.158 0.00 0.00 0.00 6.13
135 136 2.193536 GTCCACCATAATGCCCGCC 61.194 63.158 0.00 0.00 0.00 6.13
136 137 2.123939 CCACCATAATGCCCGCCA 60.124 61.111 0.00 0.00 0.00 5.69
137 138 2.489275 CCACCATAATGCCCGCCAC 61.489 63.158 0.00 0.00 0.00 5.01
138 139 2.515991 ACCATAATGCCCGCCACG 60.516 61.111 0.00 0.00 0.00 4.94
139 140 3.964875 CCATAATGCCCGCCACGC 61.965 66.667 0.00 0.00 0.00 5.34
140 141 3.964875 CATAATGCCCGCCACGCC 61.965 66.667 0.00 0.00 0.00 5.68
160 161 2.831742 CGGTCTACAGCCCCGCTA 60.832 66.667 0.00 0.00 36.40 4.26
161 162 2.846652 CGGTCTACAGCCCCGCTAG 61.847 68.421 0.00 0.00 36.40 3.42
162 163 2.499827 GGTCTACAGCCCCGCTAGG 61.500 68.421 0.00 0.00 36.40 3.02
173 174 3.217242 CCGCTAGGGATACATGCAC 57.783 57.895 8.65 0.00 38.47 4.57
174 175 0.320771 CCGCTAGGGATACATGCACC 60.321 60.000 8.65 0.00 38.47 5.01
175 176 0.392706 CGCTAGGGATACATGCACCA 59.607 55.000 0.00 0.00 39.74 4.17
176 177 1.606480 CGCTAGGGATACATGCACCAG 60.606 57.143 0.00 0.00 39.74 4.00
177 178 1.417890 GCTAGGGATACATGCACCAGT 59.582 52.381 0.00 0.00 39.74 4.00
178 179 2.808202 GCTAGGGATACATGCACCAGTG 60.808 54.545 0.00 0.00 39.74 3.66
190 191 3.374402 CCAGTGCGGTCTCGTCCT 61.374 66.667 0.00 0.00 38.89 3.85
191 192 2.651361 CAGTGCGGTCTCGTCCTT 59.349 61.111 0.00 0.00 38.89 3.36
192 193 1.734477 CAGTGCGGTCTCGTCCTTG 60.734 63.158 0.00 0.00 38.89 3.61
193 194 3.112709 GTGCGGTCTCGTCCTTGC 61.113 66.667 0.00 0.00 38.89 4.01
194 195 4.717629 TGCGGTCTCGTCCTTGCG 62.718 66.667 0.00 0.00 38.89 4.85
196 197 4.717629 CGGTCTCGTCCTTGCGCA 62.718 66.667 5.66 5.66 0.00 6.09
197 198 3.112709 GGTCTCGTCCTTGCGCAC 61.113 66.667 11.12 0.00 0.00 5.34
198 199 3.112709 GTCTCGTCCTTGCGCACC 61.113 66.667 11.12 0.00 0.00 5.01
199 200 4.717629 TCTCGTCCTTGCGCACCG 62.718 66.667 11.12 10.78 0.00 4.94
203 204 3.712881 GTCCTTGCGCACCGTGTC 61.713 66.667 11.12 0.00 0.00 3.67
204 205 3.923864 TCCTTGCGCACCGTGTCT 61.924 61.111 11.12 0.00 0.00 3.41
205 206 2.048597 CCTTGCGCACCGTGTCTA 60.049 61.111 11.12 0.00 0.00 2.59
206 207 2.094659 CCTTGCGCACCGTGTCTAG 61.095 63.158 11.12 1.08 0.00 2.43
207 208 1.372997 CTTGCGCACCGTGTCTAGT 60.373 57.895 11.12 0.00 0.00 2.57
208 209 0.109458 CTTGCGCACCGTGTCTAGTA 60.109 55.000 11.12 0.00 0.00 1.82
209 210 0.109458 TTGCGCACCGTGTCTAGTAG 60.109 55.000 11.12 0.00 0.00 2.57
210 211 1.872679 GCGCACCGTGTCTAGTAGC 60.873 63.158 0.30 0.00 0.00 3.58
211 212 1.504900 CGCACCGTGTCTAGTAGCA 59.495 57.895 0.00 0.00 0.00 3.49
212 213 0.100682 CGCACCGTGTCTAGTAGCAT 59.899 55.000 0.00 0.00 0.00 3.79
213 214 1.841450 GCACCGTGTCTAGTAGCATC 58.159 55.000 0.00 0.00 0.00 3.91
214 215 1.134367 GCACCGTGTCTAGTAGCATCA 59.866 52.381 0.00 0.00 0.00 3.07
215 216 2.223829 GCACCGTGTCTAGTAGCATCAT 60.224 50.000 0.00 0.00 0.00 2.45
216 217 3.633235 CACCGTGTCTAGTAGCATCATC 58.367 50.000 0.00 0.00 0.00 2.92
217 218 3.066760 CACCGTGTCTAGTAGCATCATCA 59.933 47.826 0.00 0.00 0.00 3.07
218 219 3.066900 ACCGTGTCTAGTAGCATCATCAC 59.933 47.826 0.00 0.00 0.00 3.06
219 220 3.292423 CGTGTCTAGTAGCATCATCACG 58.708 50.000 0.00 0.00 40.50 4.35
220 221 3.002348 CGTGTCTAGTAGCATCATCACGA 59.998 47.826 8.33 0.00 46.26 4.35
221 222 4.495844 CGTGTCTAGTAGCATCATCACGAA 60.496 45.833 8.33 0.00 46.26 3.85
222 223 4.735822 GTGTCTAGTAGCATCATCACGAAC 59.264 45.833 0.00 0.00 0.00 3.95
223 224 4.398044 TGTCTAGTAGCATCATCACGAACA 59.602 41.667 0.00 0.00 0.00 3.18
224 225 4.735822 GTCTAGTAGCATCATCACGAACAC 59.264 45.833 0.00 0.00 0.00 3.32
225 226 2.893637 AGTAGCATCATCACGAACACC 58.106 47.619 0.00 0.00 0.00 4.16
226 227 1.588404 GTAGCATCATCACGAACACCG 59.412 52.381 0.00 0.00 45.44 4.94
242 243 2.867472 CGTTTGTCGGCCATGTCC 59.133 61.111 2.24 0.00 35.71 4.02
250 251 2.900273 GGCCATGTCCGAGTGCTA 59.100 61.111 0.00 0.00 0.00 3.49
251 252 1.521681 GGCCATGTCCGAGTGCTAC 60.522 63.158 0.00 0.00 0.00 3.58
252 253 1.218047 GCCATGTCCGAGTGCTACA 59.782 57.895 0.00 0.00 0.00 2.74
253 254 1.084370 GCCATGTCCGAGTGCTACAC 61.084 60.000 0.00 0.00 34.10 2.90
254 255 0.802222 CCATGTCCGAGTGCTACACG 60.802 60.000 0.00 0.00 39.64 4.49
255 256 0.109272 CATGTCCGAGTGCTACACGT 60.109 55.000 0.00 0.00 39.64 4.49
256 257 0.170561 ATGTCCGAGTGCTACACGTC 59.829 55.000 0.00 0.00 39.64 4.34
257 258 1.154073 GTCCGAGTGCTACACGTCC 60.154 63.158 0.00 0.00 39.64 4.79
258 259 1.303074 TCCGAGTGCTACACGTCCT 60.303 57.895 0.00 0.00 39.64 3.85
259 260 1.154016 CCGAGTGCTACACGTCCTG 60.154 63.158 0.00 0.00 39.64 3.86
260 261 1.154016 CGAGTGCTACACGTCCTGG 60.154 63.158 0.00 0.00 39.64 4.45
261 262 1.863662 CGAGTGCTACACGTCCTGGT 61.864 60.000 0.00 0.00 39.64 4.00
262 263 0.388649 GAGTGCTACACGTCCTGGTG 60.389 60.000 0.00 0.00 43.54 4.17
263 264 1.374252 GTGCTACACGTCCTGGTGG 60.374 63.158 0.00 0.00 42.23 4.61
264 265 1.835267 TGCTACACGTCCTGGTGGT 60.835 57.895 0.00 0.00 42.23 4.16
265 266 1.080025 GCTACACGTCCTGGTGGTC 60.080 63.158 0.00 0.00 42.23 4.02
266 267 1.590147 CTACACGTCCTGGTGGTCC 59.410 63.158 0.00 0.00 42.23 4.46
267 268 2.209064 CTACACGTCCTGGTGGTCCG 62.209 65.000 0.00 0.00 42.23 4.79
268 269 4.373116 CACGTCCTGGTGGTCCGG 62.373 72.222 0.00 0.00 39.70 5.14
286 287 2.816958 CGCCATCGTCTGCAGCTT 60.817 61.111 9.47 0.00 0.00 3.74
287 288 2.806856 CGCCATCGTCTGCAGCTTC 61.807 63.158 9.47 0.96 0.00 3.86
288 289 2.806856 GCCATCGTCTGCAGCTTCG 61.807 63.158 9.47 13.50 0.00 3.79
289 290 2.699809 CATCGTCTGCAGCTTCGC 59.300 61.111 9.47 0.00 0.00 4.70
290 291 2.882777 ATCGTCTGCAGCTTCGCG 60.883 61.111 9.47 0.00 33.35 5.87
291 292 3.633094 ATCGTCTGCAGCTTCGCGT 62.633 57.895 9.47 3.74 33.35 6.01
292 293 3.406361 CGTCTGCAGCTTCGCGTT 61.406 61.111 9.47 0.00 33.35 4.84
293 294 2.086426 CGTCTGCAGCTTCGCGTTA 61.086 57.895 9.47 0.00 33.35 3.18
294 295 1.614227 CGTCTGCAGCTTCGCGTTAA 61.614 55.000 9.47 0.00 33.35 2.01
295 296 0.721718 GTCTGCAGCTTCGCGTTAAT 59.278 50.000 9.47 0.00 33.35 1.40
296 297 0.999406 TCTGCAGCTTCGCGTTAATC 59.001 50.000 9.47 0.00 33.35 1.75
297 298 1.002366 CTGCAGCTTCGCGTTAATCT 58.998 50.000 5.77 0.00 33.35 2.40
298 299 1.394917 CTGCAGCTTCGCGTTAATCTT 59.605 47.619 5.77 0.00 33.35 2.40
299 300 1.393539 TGCAGCTTCGCGTTAATCTTC 59.606 47.619 5.77 0.00 33.35 2.87
300 301 1.589968 GCAGCTTCGCGTTAATCTTCG 60.590 52.381 5.77 0.00 0.00 3.79
301 302 1.917955 CAGCTTCGCGTTAATCTTCGA 59.082 47.619 5.77 0.00 0.00 3.71
302 303 1.918609 AGCTTCGCGTTAATCTTCGAC 59.081 47.619 5.77 0.00 0.00 4.20
303 304 1.330050 GCTTCGCGTTAATCTTCGACG 60.330 52.381 5.77 0.00 39.61 5.12
308 309 0.297820 CGTTAATCTTCGACGCCTGC 59.702 55.000 0.00 0.00 0.00 4.85
309 310 0.297820 GTTAATCTTCGACGCCTGCG 59.702 55.000 10.40 10.40 46.03 5.18
310 311 1.418342 TTAATCTTCGACGCCTGCGC 61.418 55.000 12.03 0.00 44.19 6.09
327 328 3.076092 CCTGCAACCTCAGGCTCT 58.924 61.111 0.00 0.00 46.11 4.09
328 329 2.290847 CCTGCAACCTCAGGCTCTA 58.709 57.895 0.00 0.00 46.11 2.43
329 330 0.107945 CCTGCAACCTCAGGCTCTAC 60.108 60.000 0.00 0.00 46.11 2.59
330 331 0.610174 CTGCAACCTCAGGCTCTACA 59.390 55.000 0.00 0.00 0.00 2.74
331 332 1.209019 CTGCAACCTCAGGCTCTACAT 59.791 52.381 0.00 0.00 0.00 2.29
332 333 1.208052 TGCAACCTCAGGCTCTACATC 59.792 52.381 0.00 0.00 0.00 3.06
333 334 1.804372 GCAACCTCAGGCTCTACATCG 60.804 57.143 0.00 0.00 0.00 3.84
334 335 1.115467 AACCTCAGGCTCTACATCGG 58.885 55.000 0.00 0.00 0.00 4.18
335 336 1.365633 CCTCAGGCTCTACATCGGC 59.634 63.158 0.00 0.00 0.00 5.54
336 337 1.007964 CTCAGGCTCTACATCGGCG 60.008 63.158 0.00 0.00 0.00 6.46
337 338 2.659897 CAGGCTCTACATCGGCGC 60.660 66.667 0.00 0.00 0.00 6.53
338 339 3.917760 AGGCTCTACATCGGCGCC 61.918 66.667 19.07 19.07 40.99 6.53
339 340 4.221422 GGCTCTACATCGGCGCCA 62.221 66.667 28.98 14.46 40.41 5.69
340 341 2.029666 GCTCTACATCGGCGCCAT 59.970 61.111 28.98 16.24 0.00 4.40
341 342 2.313172 GCTCTACATCGGCGCCATG 61.313 63.158 28.98 27.71 0.00 3.66
342 343 1.363807 CTCTACATCGGCGCCATGA 59.636 57.895 32.04 22.20 0.00 3.07
343 344 0.941463 CTCTACATCGGCGCCATGAC 60.941 60.000 32.04 8.02 0.00 3.06
350 351 4.807039 GGCGCCATGACGTACGGT 62.807 66.667 24.80 5.07 34.88 4.83
351 352 3.550992 GCGCCATGACGTACGGTG 61.551 66.667 21.06 14.44 34.88 4.94
352 353 2.179767 CGCCATGACGTACGGTGA 59.820 61.111 21.06 2.70 31.75 4.02
353 354 1.226859 CGCCATGACGTACGGTGAT 60.227 57.895 21.06 5.17 31.75 3.06
354 355 1.479420 CGCCATGACGTACGGTGATG 61.479 60.000 21.06 16.50 39.63 3.07
356 357 2.297625 CATGACGTACGGTGATGGC 58.702 57.895 21.06 0.41 36.70 4.40
357 358 1.226859 ATGACGTACGGTGATGGCG 60.227 57.895 21.06 0.00 0.00 5.69
358 359 2.581409 GACGTACGGTGATGGCGG 60.581 66.667 21.06 0.00 0.00 6.13
359 360 4.807039 ACGTACGGTGATGGCGGC 62.807 66.667 21.06 0.00 0.00 6.53
375 376 2.904866 GCCGAGGCCACAAACACA 60.905 61.111 5.01 0.00 34.56 3.72
376 377 2.908073 GCCGAGGCCACAAACACAG 61.908 63.158 5.01 0.00 34.56 3.66
377 378 1.525995 CCGAGGCCACAAACACAGT 60.526 57.895 5.01 0.00 0.00 3.55
378 379 1.648720 CGAGGCCACAAACACAGTG 59.351 57.895 5.01 0.00 36.76 3.66
379 380 1.360192 GAGGCCACAAACACAGTGC 59.640 57.895 5.01 0.00 35.69 4.40
380 381 2.075426 GAGGCCACAAACACAGTGCC 62.075 60.000 5.01 0.00 35.69 5.01
381 382 2.026014 GCCACAAACACAGTGCCG 59.974 61.111 0.00 0.00 35.69 5.69
382 383 2.026014 CCACAAACACAGTGCCGC 59.974 61.111 0.00 0.00 35.69 6.53
383 384 2.352229 CACAAACACAGTGCCGCG 60.352 61.111 0.00 0.00 0.00 6.46
384 385 4.250431 ACAAACACAGTGCCGCGC 62.250 61.111 0.00 0.00 0.00 6.86
404 405 2.867472 GGCACACCGGTTTGATCG 59.133 61.111 24.69 5.27 0.00 3.69
410 411 4.201951 CCGGTTTGATCGGTCTGG 57.798 61.111 0.00 0.00 42.33 3.86
411 412 1.295423 CCGGTTTGATCGGTCTGGT 59.705 57.895 0.00 0.00 42.33 4.00
412 413 0.321298 CCGGTTTGATCGGTCTGGTT 60.321 55.000 0.00 0.00 42.33 3.67
413 414 0.796312 CGGTTTGATCGGTCTGGTTG 59.204 55.000 0.00 0.00 0.00 3.77
414 415 1.606994 CGGTTTGATCGGTCTGGTTGA 60.607 52.381 0.00 0.00 0.00 3.18
415 416 2.076863 GGTTTGATCGGTCTGGTTGAG 58.923 52.381 0.00 0.00 0.00 3.02
416 417 1.464997 GTTTGATCGGTCTGGTTGAGC 59.535 52.381 0.00 0.00 39.62 4.26
417 418 0.684535 TTGATCGGTCTGGTTGAGCA 59.315 50.000 0.00 0.00 42.88 4.26
418 419 0.904649 TGATCGGTCTGGTTGAGCAT 59.095 50.000 0.00 0.00 42.88 3.79
419 420 1.134699 TGATCGGTCTGGTTGAGCATC 60.135 52.381 0.00 0.00 42.88 3.91
434 435 4.563061 TGAGCATCATGGATCTAATCACG 58.437 43.478 0.00 0.00 42.56 4.35
435 436 3.931468 GAGCATCATGGATCTAATCACGG 59.069 47.826 0.00 0.00 33.17 4.94
436 437 3.580022 AGCATCATGGATCTAATCACGGA 59.420 43.478 0.00 0.00 0.00 4.69
437 438 3.681897 GCATCATGGATCTAATCACGGAC 59.318 47.826 0.00 0.00 0.00 4.79
438 439 4.248859 CATCATGGATCTAATCACGGACC 58.751 47.826 0.00 0.00 0.00 4.46
439 440 2.296190 TCATGGATCTAATCACGGACCG 59.704 50.000 13.61 13.61 0.00 4.79
440 441 2.061509 TGGATCTAATCACGGACCGA 57.938 50.000 23.38 0.00 0.00 4.69
441 442 1.954382 TGGATCTAATCACGGACCGAG 59.046 52.381 23.38 13.88 0.00 4.63
442 443 2.228059 GGATCTAATCACGGACCGAGA 58.772 52.381 23.38 19.67 0.00 4.04
443 444 2.226912 GGATCTAATCACGGACCGAGAG 59.773 54.545 23.38 10.12 29.45 3.20
444 445 1.022735 TCTAATCACGGACCGAGAGC 58.977 55.000 23.38 0.00 29.45 4.09
445 446 1.025812 CTAATCACGGACCGAGAGCT 58.974 55.000 23.38 12.04 29.45 4.09
446 447 1.405821 CTAATCACGGACCGAGAGCTT 59.594 52.381 23.38 12.79 29.45 3.74
447 448 0.173708 AATCACGGACCGAGAGCTTC 59.826 55.000 23.38 0.00 29.45 3.86
448 449 0.965866 ATCACGGACCGAGAGCTTCA 60.966 55.000 23.38 0.00 29.45 3.02
449 450 1.444553 CACGGACCGAGAGCTTCAC 60.445 63.158 23.38 0.00 0.00 3.18
450 451 2.202492 CGGACCGAGAGCTTCACG 60.202 66.667 8.64 0.00 0.00 4.35
451 452 2.687805 CGGACCGAGAGCTTCACGA 61.688 63.158 8.64 0.00 32.24 4.35
452 453 1.585006 GGACCGAGAGCTTCACGAA 59.415 57.895 9.11 0.00 32.24 3.85
453 454 0.456995 GGACCGAGAGCTTCACGAAG 60.457 60.000 2.29 2.29 41.24 3.79
454 455 0.522180 GACCGAGAGCTTCACGAAGA 59.478 55.000 10.97 0.00 40.79 2.87
455 456 0.959553 ACCGAGAGCTTCACGAAGAA 59.040 50.000 10.97 0.00 40.79 2.52
466 467 3.876274 TCACGAAGAAGAGATGGAAGG 57.124 47.619 0.00 0.00 0.00 3.46
467 468 3.165875 TCACGAAGAAGAGATGGAAGGT 58.834 45.455 0.00 0.00 0.00 3.50
468 469 3.056536 TCACGAAGAAGAGATGGAAGGTG 60.057 47.826 0.00 0.00 0.00 4.00
469 470 3.056536 CACGAAGAAGAGATGGAAGGTGA 60.057 47.826 0.00 0.00 0.00 4.02
470 471 3.578716 ACGAAGAAGAGATGGAAGGTGAA 59.421 43.478 0.00 0.00 0.00 3.18
471 472 4.180057 CGAAGAAGAGATGGAAGGTGAAG 58.820 47.826 0.00 0.00 0.00 3.02
472 473 4.512484 GAAGAAGAGATGGAAGGTGAAGG 58.488 47.826 0.00 0.00 0.00 3.46
473 474 2.238395 AGAAGAGATGGAAGGTGAAGGC 59.762 50.000 0.00 0.00 0.00 4.35
474 475 1.661463 AGAGATGGAAGGTGAAGGCA 58.339 50.000 0.00 0.00 0.00 4.75
475 476 1.988107 AGAGATGGAAGGTGAAGGCAA 59.012 47.619 0.00 0.00 0.00 4.52
476 477 2.087646 GAGATGGAAGGTGAAGGCAAC 58.912 52.381 0.00 0.00 0.00 4.17
477 478 0.804989 GATGGAAGGTGAAGGCAACG 59.195 55.000 0.00 0.00 46.39 4.10
478 479 1.244019 ATGGAAGGTGAAGGCAACGC 61.244 55.000 0.00 0.00 46.39 4.84
479 480 1.600916 GGAAGGTGAAGGCAACGCT 60.601 57.895 0.00 0.00 46.39 5.07
480 481 1.576421 GAAGGTGAAGGCAACGCTG 59.424 57.895 0.00 0.00 46.39 5.18
481 482 0.884704 GAAGGTGAAGGCAACGCTGA 60.885 55.000 0.00 0.00 46.39 4.26
482 483 0.886490 AAGGTGAAGGCAACGCTGAG 60.886 55.000 0.00 0.00 46.39 3.35
483 484 1.301716 GGTGAAGGCAACGCTGAGA 60.302 57.895 0.00 0.00 46.39 3.27
484 485 1.294659 GGTGAAGGCAACGCTGAGAG 61.295 60.000 0.00 0.00 46.39 3.20
485 486 1.004560 TGAAGGCAACGCTGAGAGG 60.005 57.895 0.00 0.00 46.39 3.69
486 487 1.743252 GAAGGCAACGCTGAGAGGG 60.743 63.158 0.00 0.00 46.39 4.30
487 488 3.259633 AAGGCAACGCTGAGAGGGG 62.260 63.158 0.00 0.00 46.39 4.79
488 489 3.706373 GGCAACGCTGAGAGGGGA 61.706 66.667 0.00 0.00 31.71 4.81
489 490 2.347490 GCAACGCTGAGAGGGGAA 59.653 61.111 0.00 0.00 31.71 3.97
490 491 2.035442 GCAACGCTGAGAGGGGAAC 61.035 63.158 0.00 0.00 31.71 3.62
491 492 1.738099 CAACGCTGAGAGGGGAACG 60.738 63.158 0.00 0.00 31.71 3.95
492 493 2.943978 AACGCTGAGAGGGGAACGG 61.944 63.158 0.00 0.00 31.71 4.44
493 494 4.148825 CGCTGAGAGGGGAACGGG 62.149 72.222 0.00 0.00 0.00 5.28
494 495 2.683933 GCTGAGAGGGGAACGGGA 60.684 66.667 0.00 0.00 0.00 5.14
495 496 2.726351 GCTGAGAGGGGAACGGGAG 61.726 68.421 0.00 0.00 0.00 4.30
496 497 1.000486 CTGAGAGGGGAACGGGAGA 60.000 63.158 0.00 0.00 0.00 3.71
497 498 0.397816 CTGAGAGGGGAACGGGAGAT 60.398 60.000 0.00 0.00 0.00 2.75
498 499 0.397254 TGAGAGGGGAACGGGAGATC 60.397 60.000 0.00 0.00 0.00 2.75
499 500 0.397254 GAGAGGGGAACGGGAGATCA 60.397 60.000 0.00 0.00 32.68 2.92
500 501 0.397816 AGAGGGGAACGGGAGATCAG 60.398 60.000 0.00 0.00 32.68 2.90
501 502 0.688087 GAGGGGAACGGGAGATCAGT 60.688 60.000 0.00 0.00 32.68 3.41
502 503 0.978146 AGGGGAACGGGAGATCAGTG 60.978 60.000 0.00 0.00 32.68 3.66
503 504 1.522569 GGGAACGGGAGATCAGTGG 59.477 63.158 0.00 0.00 32.68 4.00
504 505 1.265454 GGGAACGGGAGATCAGTGGT 61.265 60.000 0.00 0.00 32.68 4.16
505 506 0.108138 GGAACGGGAGATCAGTGGTG 60.108 60.000 0.00 0.00 32.68 4.17
506 507 0.741221 GAACGGGAGATCAGTGGTGC 60.741 60.000 0.00 0.00 0.00 5.01
507 508 1.480212 AACGGGAGATCAGTGGTGCA 61.480 55.000 0.00 0.00 0.00 4.57
508 509 1.153489 CGGGAGATCAGTGGTGCAG 60.153 63.158 0.00 0.00 0.00 4.41
509 510 1.451028 GGGAGATCAGTGGTGCAGC 60.451 63.158 9.47 9.47 0.00 5.25
510 511 1.812922 GGAGATCAGTGGTGCAGCG 60.813 63.158 11.91 0.00 0.00 5.18
511 512 1.812922 GAGATCAGTGGTGCAGCGG 60.813 63.158 11.91 3.52 0.00 5.52
512 513 2.821366 GATCAGTGGTGCAGCGGG 60.821 66.667 11.91 3.14 0.00 6.13
513 514 4.415150 ATCAGTGGTGCAGCGGGG 62.415 66.667 11.91 2.76 0.00 5.73
524 525 4.798682 AGCGGGGGTGGGTAGGAG 62.799 72.222 0.00 0.00 0.00 3.69
526 527 4.410033 CGGGGGTGGGTAGGAGGT 62.410 72.222 0.00 0.00 0.00 3.85
527 528 2.691252 GGGGGTGGGTAGGAGGTG 60.691 72.222 0.00 0.00 0.00 4.00
528 529 2.453054 GGGGTGGGTAGGAGGTGA 59.547 66.667 0.00 0.00 0.00 4.02
529 530 1.689582 GGGGTGGGTAGGAGGTGAG 60.690 68.421 0.00 0.00 0.00 3.51
530 531 1.390926 GGGTGGGTAGGAGGTGAGA 59.609 63.158 0.00 0.00 0.00 3.27
531 532 0.252558 GGGTGGGTAGGAGGTGAGAA 60.253 60.000 0.00 0.00 0.00 2.87
532 533 1.652947 GGTGGGTAGGAGGTGAGAAA 58.347 55.000 0.00 0.00 0.00 2.52
533 534 1.555533 GGTGGGTAGGAGGTGAGAAAG 59.444 57.143 0.00 0.00 0.00 2.62
534 535 2.537143 GTGGGTAGGAGGTGAGAAAGA 58.463 52.381 0.00 0.00 0.00 2.52
535 536 2.904434 GTGGGTAGGAGGTGAGAAAGAA 59.096 50.000 0.00 0.00 0.00 2.52
536 537 3.326880 GTGGGTAGGAGGTGAGAAAGAAA 59.673 47.826 0.00 0.00 0.00 2.52
537 538 3.326880 TGGGTAGGAGGTGAGAAAGAAAC 59.673 47.826 0.00 0.00 0.00 2.78
538 539 3.307550 GGGTAGGAGGTGAGAAAGAAACC 60.308 52.174 0.00 0.00 0.00 3.27
539 540 3.307550 GGTAGGAGGTGAGAAAGAAACCC 60.308 52.174 0.00 0.00 34.29 4.11
540 541 2.707554 AGGAGGTGAGAAAGAAACCCT 58.292 47.619 0.00 0.00 34.29 4.34
541 542 2.640332 AGGAGGTGAGAAAGAAACCCTC 59.360 50.000 0.00 0.00 38.18 4.30
542 543 2.613223 GGAGGTGAGAAAGAAACCCTCG 60.613 54.545 0.00 0.00 39.49 4.63
543 544 1.348036 AGGTGAGAAAGAAACCCTCGG 59.652 52.381 0.00 0.00 34.29 4.63
544 545 1.610886 GGTGAGAAAGAAACCCTCGGG 60.611 57.143 0.00 0.00 42.03 5.14
556 557 2.043450 CTCGGGTGAGAGGAGCCT 60.043 66.667 0.00 0.00 45.57 4.58
557 558 1.684049 CTCGGGTGAGAGGAGCCTT 60.684 63.158 0.00 0.00 45.57 4.35
558 559 1.229209 TCGGGTGAGAGGAGCCTTT 60.229 57.895 0.00 0.00 0.00 3.11
559 560 0.040646 TCGGGTGAGAGGAGCCTTTA 59.959 55.000 0.00 0.00 0.00 1.85
560 561 1.123928 CGGGTGAGAGGAGCCTTTAT 58.876 55.000 0.00 0.00 0.00 1.40
561 562 2.091499 TCGGGTGAGAGGAGCCTTTATA 60.091 50.000 0.00 0.00 0.00 0.98
562 563 2.297597 CGGGTGAGAGGAGCCTTTATAG 59.702 54.545 0.00 0.00 0.00 1.31
563 564 2.037902 GGGTGAGAGGAGCCTTTATAGC 59.962 54.545 0.00 0.00 0.00 2.97
564 565 2.037902 GGTGAGAGGAGCCTTTATAGCC 59.962 54.545 0.00 0.00 0.00 3.93
565 566 2.969262 GTGAGAGGAGCCTTTATAGCCT 59.031 50.000 0.00 0.00 0.00 4.58
566 567 3.389656 GTGAGAGGAGCCTTTATAGCCTT 59.610 47.826 0.00 0.00 0.00 4.35
567 568 4.589374 GTGAGAGGAGCCTTTATAGCCTTA 59.411 45.833 0.00 0.00 0.00 2.69
568 569 5.247337 GTGAGAGGAGCCTTTATAGCCTTAT 59.753 44.000 0.00 0.00 0.00 1.73
569 570 6.437793 GTGAGAGGAGCCTTTATAGCCTTATA 59.562 42.308 0.00 0.00 0.00 0.98
570 571 6.437793 TGAGAGGAGCCTTTATAGCCTTATAC 59.562 42.308 0.00 0.00 0.00 1.47
571 572 6.323737 AGAGGAGCCTTTATAGCCTTATACA 58.676 40.000 0.00 0.00 0.00 2.29
572 573 6.211785 AGAGGAGCCTTTATAGCCTTATACAC 59.788 42.308 0.00 0.00 0.00 2.90
573 574 5.047235 AGGAGCCTTTATAGCCTTATACACG 60.047 44.000 0.00 0.00 0.00 4.49
574 575 5.279356 GGAGCCTTTATAGCCTTATACACGT 60.279 44.000 0.00 0.00 0.00 4.49
575 576 5.539048 AGCCTTTATAGCCTTATACACGTG 58.461 41.667 15.48 15.48 0.00 4.49
576 577 4.151867 GCCTTTATAGCCTTATACACGTGC 59.848 45.833 17.22 0.00 0.00 5.34
577 578 4.689345 CCTTTATAGCCTTATACACGTGCC 59.311 45.833 17.22 0.00 0.00 5.01
578 579 2.433868 ATAGCCTTATACACGTGCCG 57.566 50.000 17.22 0.00 0.00 5.69
579 580 1.391577 TAGCCTTATACACGTGCCGA 58.608 50.000 17.22 0.95 0.00 5.54
580 581 0.102481 AGCCTTATACACGTGCCGAG 59.898 55.000 17.22 8.56 0.00 4.63
581 582 1.488261 GCCTTATACACGTGCCGAGC 61.488 60.000 17.22 7.79 0.00 5.03
582 583 0.179121 CCTTATACACGTGCCGAGCA 60.179 55.000 17.22 0.00 35.60 4.26
591 592 2.359850 TGCCGAGCACCCATTGAC 60.360 61.111 0.00 0.00 31.71 3.18
592 593 2.045926 GCCGAGCACCCATTGACT 60.046 61.111 0.00 0.00 0.00 3.41
593 594 1.675641 GCCGAGCACCCATTGACTT 60.676 57.895 0.00 0.00 0.00 3.01
594 595 1.926511 GCCGAGCACCCATTGACTTG 61.927 60.000 0.00 0.00 0.00 3.16
595 596 0.321564 CCGAGCACCCATTGACTTGA 60.322 55.000 0.00 0.00 0.00 3.02
596 597 0.798776 CGAGCACCCATTGACTTGAC 59.201 55.000 0.00 0.00 0.00 3.18
597 598 1.168714 GAGCACCCATTGACTTGACC 58.831 55.000 0.00 0.00 0.00 4.02
598 599 0.478072 AGCACCCATTGACTTGACCA 59.522 50.000 0.00 0.00 0.00 4.02
599 600 0.883833 GCACCCATTGACTTGACCAG 59.116 55.000 0.00 0.00 0.00 4.00
600 601 1.819305 GCACCCATTGACTTGACCAGT 60.819 52.381 0.00 0.00 39.07 4.00
601 602 2.586425 CACCCATTGACTTGACCAGTT 58.414 47.619 0.00 0.00 35.01 3.16
602 603 2.958355 CACCCATTGACTTGACCAGTTT 59.042 45.455 0.00 0.00 35.01 2.66
603 604 3.384467 CACCCATTGACTTGACCAGTTTT 59.616 43.478 0.00 0.00 35.01 2.43
604 605 4.582656 CACCCATTGACTTGACCAGTTTTA 59.417 41.667 0.00 0.00 35.01 1.52
605 606 4.827284 ACCCATTGACTTGACCAGTTTTAG 59.173 41.667 0.00 0.00 35.01 1.85
606 607 4.218417 CCCATTGACTTGACCAGTTTTAGG 59.782 45.833 0.00 0.00 35.01 2.69
607 608 4.321230 CCATTGACTTGACCAGTTTTAGGC 60.321 45.833 0.00 0.00 35.01 3.93
608 609 3.569194 TGACTTGACCAGTTTTAGGCA 57.431 42.857 0.00 0.00 35.01 4.75
609 610 3.476552 TGACTTGACCAGTTTTAGGCAG 58.523 45.455 0.00 0.00 35.01 4.85
610 611 3.118038 TGACTTGACCAGTTTTAGGCAGT 60.118 43.478 0.00 0.00 35.01 4.40
611 612 4.101898 TGACTTGACCAGTTTTAGGCAGTA 59.898 41.667 0.00 0.00 35.01 2.74
612 613 5.043737 ACTTGACCAGTTTTAGGCAGTAA 57.956 39.130 0.00 0.00 27.32 2.24
613 614 5.442391 ACTTGACCAGTTTTAGGCAGTAAA 58.558 37.500 0.00 0.00 27.32 2.01
614 615 5.889289 ACTTGACCAGTTTTAGGCAGTAAAA 59.111 36.000 0.35 0.35 38.12 1.52
615 616 6.378848 ACTTGACCAGTTTTAGGCAGTAAAAA 59.621 34.615 5.15 0.00 41.33 1.94
639 640 9.639601 AAAAACTCAAGAAAAACCTCAGTAAAG 57.360 29.630 0.00 0.00 0.00 1.85
640 641 8.575649 AAACTCAAGAAAAACCTCAGTAAAGA 57.424 30.769 0.00 0.00 0.00 2.52
641 642 8.575649 AACTCAAGAAAAACCTCAGTAAAGAA 57.424 30.769 0.00 0.00 0.00 2.52
642 643 8.575649 ACTCAAGAAAAACCTCAGTAAAGAAA 57.424 30.769 0.00 0.00 0.00 2.52
643 644 8.459635 ACTCAAGAAAAACCTCAGTAAAGAAAC 58.540 33.333 0.00 0.00 0.00 2.78
644 645 7.469260 TCAAGAAAAACCTCAGTAAAGAAACG 58.531 34.615 0.00 0.00 0.00 3.60
645 646 6.997239 AGAAAAACCTCAGTAAAGAAACGT 57.003 33.333 0.00 0.00 0.00 3.99
646 647 8.392612 CAAGAAAAACCTCAGTAAAGAAACGTA 58.607 33.333 0.00 0.00 0.00 3.57
647 648 7.913423 AGAAAAACCTCAGTAAAGAAACGTAC 58.087 34.615 0.00 0.00 0.00 3.67
648 649 6.609237 AAAACCTCAGTAAAGAAACGTACC 57.391 37.500 0.00 0.00 0.00 3.34
649 650 3.905784 ACCTCAGTAAAGAAACGTACCG 58.094 45.455 0.00 0.00 0.00 4.02
650 651 3.569701 ACCTCAGTAAAGAAACGTACCGA 59.430 43.478 0.00 0.00 0.00 4.69
651 652 4.164294 CCTCAGTAAAGAAACGTACCGAG 58.836 47.826 0.00 0.00 0.00 4.63
652 653 4.083110 CCTCAGTAAAGAAACGTACCGAGA 60.083 45.833 0.00 0.00 29.72 4.04
653 654 5.392811 CCTCAGTAAAGAAACGTACCGAGAT 60.393 44.000 0.00 0.00 29.72 2.75
654 655 6.017400 TCAGTAAAGAAACGTACCGAGATT 57.983 37.500 0.00 0.00 0.00 2.40
655 656 6.449698 TCAGTAAAGAAACGTACCGAGATTT 58.550 36.000 0.00 0.00 0.00 2.17
656 657 7.592938 TCAGTAAAGAAACGTACCGAGATTTA 58.407 34.615 0.00 0.00 0.00 1.40
657 658 7.752239 TCAGTAAAGAAACGTACCGAGATTTAG 59.248 37.037 0.00 0.00 0.00 1.85
658 659 7.540055 CAGTAAAGAAACGTACCGAGATTTAGT 59.460 37.037 0.00 0.00 0.00 2.24
659 660 8.730680 AGTAAAGAAACGTACCGAGATTTAGTA 58.269 33.333 0.00 0.00 0.00 1.82
660 661 9.508567 GTAAAGAAACGTACCGAGATTTAGTAT 57.491 33.333 0.00 0.00 0.00 2.12
663 664 9.674824 AAGAAACGTACCGAGATTTAGTATATG 57.325 33.333 0.00 0.00 0.00 1.78
664 665 8.844244 AGAAACGTACCGAGATTTAGTATATGT 58.156 33.333 0.00 0.00 0.00 2.29
667 668 9.494271 AACGTACCGAGATTTAGTATATGTAGA 57.506 33.333 0.00 0.00 0.00 2.59
668 669 9.664332 ACGTACCGAGATTTAGTATATGTAGAT 57.336 33.333 0.00 0.00 0.00 1.98
680 681 7.483580 AGTATATGTAGATAGAACTTGGGCC 57.516 40.000 0.00 0.00 0.00 5.80
681 682 3.753294 ATGTAGATAGAACTTGGGCCG 57.247 47.619 0.00 0.00 0.00 6.13
682 683 1.760613 TGTAGATAGAACTTGGGCCGG 59.239 52.381 0.00 0.00 0.00 6.13
683 684 0.756903 TAGATAGAACTTGGGCCGGC 59.243 55.000 21.18 21.18 0.00 6.13
684 685 1.526225 GATAGAACTTGGGCCGGCC 60.526 63.158 38.57 38.57 0.00 6.13
697 698 3.830744 GGCCGGCCCTTTTTATAAAAT 57.169 42.857 36.64 0.00 0.00 1.82
698 699 3.724374 GGCCGGCCCTTTTTATAAAATC 58.276 45.455 36.64 2.82 0.00 2.17
699 700 3.493699 GGCCGGCCCTTTTTATAAAATCC 60.494 47.826 36.64 2.37 0.00 3.01
700 701 3.386726 GCCGGCCCTTTTTATAAAATCCT 59.613 43.478 18.11 0.00 0.00 3.24
701 702 4.585581 GCCGGCCCTTTTTATAAAATCCTA 59.414 41.667 18.11 0.00 0.00 2.94
702 703 5.245301 GCCGGCCCTTTTTATAAAATCCTAT 59.755 40.000 18.11 0.00 0.00 2.57
703 704 6.687604 CCGGCCCTTTTTATAAAATCCTATG 58.312 40.000 11.33 2.11 0.00 2.23
704 705 6.492087 CCGGCCCTTTTTATAAAATCCTATGA 59.508 38.462 11.33 0.00 0.00 2.15
705 706 7.014808 CCGGCCCTTTTTATAAAATCCTATGAA 59.985 37.037 11.33 0.00 0.00 2.57
706 707 8.082242 CGGCCCTTTTTATAAAATCCTATGAAG 58.918 37.037 11.33 3.75 0.00 3.02
707 708 8.367911 GGCCCTTTTTATAAAATCCTATGAAGG 58.632 37.037 11.33 11.49 45.21 3.46
736 737 4.381411 GAGAATCCCCTCTTTTGTATCGG 58.619 47.826 0.00 0.00 0.00 4.18
751 752 4.595986 TGTATCGGATCGGATAGGATTCA 58.404 43.478 19.98 12.69 29.89 2.57
791 793 2.964438 AAACTTGTCCGCGTCGCTCA 62.964 55.000 16.36 8.91 0.00 4.26
825 837 4.429854 AGGAGACCAATAAGAATCCTGC 57.570 45.455 0.00 0.00 35.86 4.85
865 880 6.674066 TCACCAAAATCTACGAAATTTCCAC 58.326 36.000 12.54 0.00 0.00 4.02
869 884 6.801862 CCAAAATCTACGAAATTTCCACAGAC 59.198 38.462 12.54 0.00 0.00 3.51
927 942 1.602323 GCGGTGGTGACCAAATCCA 60.602 57.895 5.57 0.00 43.33 3.41
934 949 4.881850 GGTGGTGACCAAATCCATAACTAG 59.118 45.833 5.57 0.00 42.59 2.57
935 950 4.335594 GTGGTGACCAAATCCATAACTAGC 59.664 45.833 5.57 0.00 34.18 3.42
936 951 4.227300 TGGTGACCAAATCCATAACTAGCT 59.773 41.667 0.00 0.00 0.00 3.32
937 952 5.193679 GGTGACCAAATCCATAACTAGCTT 58.806 41.667 0.00 0.00 0.00 3.74
938 953 5.066505 GGTGACCAAATCCATAACTAGCTTG 59.933 44.000 0.00 0.00 0.00 4.01
939 954 5.880332 GTGACCAAATCCATAACTAGCTTGA 59.120 40.000 1.04 0.00 0.00 3.02
940 955 6.037610 GTGACCAAATCCATAACTAGCTTGAG 59.962 42.308 1.04 0.00 0.00 3.02
941 956 6.070251 TGACCAAATCCATAACTAGCTTGAGA 60.070 38.462 1.04 0.00 0.00 3.27
942 957 6.721318 ACCAAATCCATAACTAGCTTGAGAA 58.279 36.000 1.04 0.00 0.00 2.87
943 958 7.175104 ACCAAATCCATAACTAGCTTGAGAAA 58.825 34.615 1.04 0.00 0.00 2.52
944 959 7.121315 ACCAAATCCATAACTAGCTTGAGAAAC 59.879 37.037 1.04 0.00 0.00 2.78
945 960 6.910536 AATCCATAACTAGCTTGAGAAACG 57.089 37.500 1.04 0.00 0.00 3.60
946 961 5.401531 TCCATAACTAGCTTGAGAAACGT 57.598 39.130 1.04 0.00 0.00 3.99
947 962 5.790593 TCCATAACTAGCTTGAGAAACGTT 58.209 37.500 1.04 0.00 0.00 3.99
948 963 5.867716 TCCATAACTAGCTTGAGAAACGTTC 59.132 40.000 0.00 0.00 0.00 3.95
949 964 5.869888 CCATAACTAGCTTGAGAAACGTTCT 59.130 40.000 0.00 0.00 44.21 3.01
950 965 6.369065 CCATAACTAGCTTGAGAAACGTTCTT 59.631 38.462 0.00 0.00 40.87 2.52
951 966 7.544566 CCATAACTAGCTTGAGAAACGTTCTTA 59.455 37.037 0.00 0.00 40.87 2.10
952 967 9.088512 CATAACTAGCTTGAGAAACGTTCTTAT 57.911 33.333 0.00 0.00 40.87 1.73
955 970 9.654663 AACTAGCTTGAGAAACGTTCTTATATT 57.345 29.630 0.00 0.00 40.87 1.28
969 984 8.619546 ACGTTCTTATATTATATAGGACGGAGC 58.380 37.037 19.51 7.45 0.00 4.70
970 985 7.797587 CGTTCTTATATTATATAGGACGGAGCG 59.202 40.741 3.93 4.41 0.00 5.03
971 986 8.834465 GTTCTTATATTATATAGGACGGAGCGA 58.166 37.037 3.93 0.00 0.00 4.93
972 987 8.604640 TCTTATATTATATAGGACGGAGCGAG 57.395 38.462 0.69 0.00 0.00 5.03
973 988 8.209584 TCTTATATTATATAGGACGGAGCGAGT 58.790 37.037 0.69 0.00 0.00 4.18
974 989 9.486497 CTTATATTATATAGGACGGAGCGAGTA 57.514 37.037 0.00 0.00 0.00 2.59
987 1002 1.086696 GCGAGTAATTGCTTGCAGGA 58.913 50.000 25.73 0.00 43.54 3.86
992 1007 1.312371 TAATTGCTTGCAGGACGGCC 61.312 55.000 0.00 0.00 0.00 6.13
1008 1023 1.451927 GCCAAGATCCATGTCGGCA 60.452 57.895 0.00 0.00 39.38 5.69
1139 2563 5.940470 AGGTATCTCAACCAAAACTGACATC 59.060 40.000 0.00 0.00 42.40 3.06
1150 2574 6.263168 ACCAAAACTGACATCTTTTACCTCAG 59.737 38.462 0.00 0.00 35.48 3.35
1151 2575 5.948992 AAACTGACATCTTTTACCTCAGC 57.051 39.130 0.00 0.00 33.06 4.26
1152 2576 3.589988 ACTGACATCTTTTACCTCAGCG 58.410 45.455 0.00 0.00 33.06 5.18
1153 2577 3.258372 ACTGACATCTTTTACCTCAGCGA 59.742 43.478 0.00 0.00 33.06 4.93
1157 2581 5.705441 TGACATCTTTTACCTCAGCGATTTT 59.295 36.000 0.00 0.00 0.00 1.82
1158 2582 6.206634 TGACATCTTTTACCTCAGCGATTTTT 59.793 34.615 0.00 0.00 0.00 1.94
1159 2583 6.612306 ACATCTTTTACCTCAGCGATTTTTC 58.388 36.000 0.00 0.00 0.00 2.29
1160 2584 5.622770 TCTTTTACCTCAGCGATTTTTCC 57.377 39.130 0.00 0.00 0.00 3.13
1172 2596 3.610585 GCGATTTTTCCCACGTCATCAAA 60.611 43.478 0.00 0.00 0.00 2.69
1184 2608 3.614176 ACGTCATCAAAGATCACGTCATG 59.386 43.478 3.24 0.00 39.41 3.07
1191 2615 0.101399 AGATCACGTCATGGAGCGAC 59.899 55.000 11.05 0.00 0.00 5.19
1203 2627 3.071874 TGGAGCGACAATCCAATTCTT 57.928 42.857 0.00 0.00 43.87 2.52
1204 2628 3.420893 TGGAGCGACAATCCAATTCTTT 58.579 40.909 0.00 0.00 43.87 2.52
1205 2629 3.440173 TGGAGCGACAATCCAATTCTTTC 59.560 43.478 0.00 0.00 43.87 2.62
1206 2630 3.181496 GGAGCGACAATCCAATTCTTTCC 60.181 47.826 0.00 0.00 36.79 3.13
1243 2667 7.430502 GCAACTTGCATGTATTAAGATGACTTC 59.569 37.037 8.97 0.00 44.26 3.01
1244 2668 7.239166 ACTTGCATGTATTAAGATGACTTCG 57.761 36.000 2.92 0.00 37.53 3.79
1251 2675 5.971792 TGTATTAAGATGACTTCGCTTCTCG 59.028 40.000 0.00 0.00 37.53 4.04
1285 2715 8.231692 TGGAGACAAGTTTGAATGTTTGATAA 57.768 30.769 0.00 0.00 37.44 1.75
1324 2757 4.678509 TCATACACAGGTCGCAAAATTC 57.321 40.909 0.00 0.00 0.00 2.17
1325 2758 4.323417 TCATACACAGGTCGCAAAATTCT 58.677 39.130 0.00 0.00 0.00 2.40
1334 5623 4.455877 AGGTCGCAAAATTCTTGTCTTAGG 59.544 41.667 0.00 0.00 0.00 2.69
1340 5629 8.020819 TCGCAAAATTCTTGTCTTAGGTTTATG 58.979 33.333 0.00 0.00 0.00 1.90
1381 5685 8.410673 ACATCTGACTAGATACATCCGTATTT 57.589 34.615 0.00 0.00 41.71 1.40
1397 5701 8.691727 CATCCGTATTTAGACAAATCTAAGACG 58.308 37.037 17.80 17.80 45.93 4.18
1411 5715 7.604657 AATCTAAGACGAGAATTATGGGACT 57.395 36.000 0.00 0.00 0.00 3.85
1438 5742 6.060136 GGGAGTACTTGTTTAACCTTGAACT 58.940 40.000 0.00 0.00 0.00 3.01
1466 5770 2.269940 AGTAATCCACTGAACAGGGCT 58.730 47.619 6.76 0.00 35.62 5.19
1470 5774 0.397941 TCCACTGAACAGGGCTCTTG 59.602 55.000 6.76 0.00 0.00 3.02
1490 5794 7.113658 TCTTGTTTAATTAGCAACCAAACCA 57.886 32.000 0.00 0.00 0.00 3.67
1622 6006 9.631257 TCCATGATACAAAGTACATTGATCATT 57.369 29.630 22.19 13.11 36.52 2.57
1661 6045 1.209019 AGCATGCTCCTACAGACCTTG 59.791 52.381 16.30 0.00 0.00 3.61
1666 6050 3.188786 CCTACAGACCTTGCGCGC 61.189 66.667 27.26 27.26 0.00 6.86
1675 6059 3.188100 CTTGCGCGCGAGATCCAA 61.188 61.111 39.29 25.15 0.00 3.53
1683 6067 1.996292 CGCGAGATCCAACAGAAGAA 58.004 50.000 0.00 0.00 0.00 2.52
1687 6071 3.369451 GCGAGATCCAACAGAAGAAAGAC 59.631 47.826 0.00 0.00 0.00 3.01
1715 6099 1.687123 GGAGCTTGGTATCTAAGGCGA 59.313 52.381 0.00 0.00 0.00 5.54
1719 6103 2.061773 CTTGGTATCTAAGGCGATGCG 58.938 52.381 0.00 0.00 0.00 4.73
1723 6107 2.059541 GTATCTAAGGCGATGCGGAAC 58.940 52.381 0.00 0.00 0.00 3.62
1727 6111 1.062587 CTAAGGCGATGCGGAACAAAG 59.937 52.381 0.00 0.00 0.00 2.77
1728 6112 0.889186 AAGGCGATGCGGAACAAAGT 60.889 50.000 0.00 0.00 0.00 2.66
1733 6117 0.804989 GATGCGGAACAAAGTGGAGG 59.195 55.000 0.00 0.00 0.00 4.30
1739 6123 2.742053 CGGAACAAAGTGGAGGTGTATG 59.258 50.000 0.00 0.00 0.00 2.39
1740 6124 3.556213 CGGAACAAAGTGGAGGTGTATGA 60.556 47.826 0.00 0.00 0.00 2.15
1741 6125 4.589908 GGAACAAAGTGGAGGTGTATGAT 58.410 43.478 0.00 0.00 0.00 2.45
1747 6131 5.755409 AAGTGGAGGTGTATGATGTGTTA 57.245 39.130 0.00 0.00 0.00 2.41
1759 6143 5.636903 ATGATGTGTTAGGTAAGGCAGAT 57.363 39.130 0.00 0.00 0.00 2.90
1781 6165 8.253810 CAGATAAGAATTGTGAGACTCTTGGTA 58.746 37.037 3.68 0.00 30.90 3.25
1787 6171 3.930336 TGTGAGACTCTTGGTAAGCATG 58.070 45.455 3.68 0.00 0.00 4.06
1791 6175 3.929610 GAGACTCTTGGTAAGCATGACAC 59.070 47.826 0.00 0.00 0.00 3.67
1809 6193 1.185618 ACGCTTCCACTAGCACTCCA 61.186 55.000 0.00 0.00 41.28 3.86
1815 6199 4.302455 CTTCCACTAGCACTCCAATATCG 58.698 47.826 0.00 0.00 0.00 2.92
1823 6207 2.743938 CACTCCAATATCGTTCTCGGG 58.256 52.381 0.00 0.00 37.69 5.14
1824 6208 1.687123 ACTCCAATATCGTTCTCGGGG 59.313 52.381 0.00 0.00 37.69 5.73
1825 6209 1.000955 CTCCAATATCGTTCTCGGGGG 59.999 57.143 0.00 0.00 37.69 5.40
1852 6236 0.755686 TTCCAAAACCACATGCCACC 59.244 50.000 0.00 0.00 0.00 4.61
1884 6271 9.517609 GTACGTACAATATCAGAGAATCAAACT 57.482 33.333 20.67 0.00 37.82 2.66
1899 6286 5.690997 ATCAAACTAGATGCATGCAGATG 57.309 39.130 26.69 17.07 0.00 2.90
1900 6287 4.520179 TCAAACTAGATGCATGCAGATGT 58.480 39.130 26.69 17.69 31.50 3.06
2006 7544 2.100631 CGGTTCGCTACAAGGGCTG 61.101 63.158 0.00 0.00 0.00 4.85
2020 7558 2.684843 GGCTGACGCTTTGCTGGAG 61.685 63.158 0.00 0.00 36.09 3.86
2055 7593 4.600012 CGACAATCTTCGCTTTGGTTAT 57.400 40.909 0.00 0.00 31.03 1.89
2060 7598 5.163513 CAATCTTCGCTTTGGTTATTGCTT 58.836 37.500 0.00 0.00 0.00 3.91
2071 7609 6.472686 TTGGTTATTGCTTTTGTGGTTAGT 57.527 33.333 0.00 0.00 0.00 2.24
2073 7611 5.221342 TGGTTATTGCTTTTGTGGTTAGTGG 60.221 40.000 0.00 0.00 0.00 4.00
2079 7617 3.749632 GCTTTTGTGGTTAGTGGTAGGGT 60.750 47.826 0.00 0.00 0.00 4.34
2085 7623 0.609662 GTTAGTGGTAGGGTCGGCAA 59.390 55.000 0.00 0.00 0.00 4.52
2139 7677 4.026356 ACCAGGGAAGTCAAGATTGAAG 57.974 45.455 0.00 0.00 39.21 3.02
2207 7755 4.241590 TGACTTACAATTTGGCTTGCTG 57.758 40.909 0.78 0.00 0.00 4.41
2244 7792 6.127952 TGGTTGTGATATTGTGTGACATGATG 60.128 38.462 0.00 0.00 0.00 3.07
2359 7908 5.673514 TCATATCTGCTAGTGACAAATGCA 58.326 37.500 0.00 0.00 0.00 3.96
2397 7948 0.981183 TCGGGCCAATGAGTTGTACT 59.019 50.000 4.39 0.00 33.36 2.73
2398 7949 2.093869 GTCGGGCCAATGAGTTGTACTA 60.094 50.000 4.39 0.00 33.36 1.82
2450 8009 5.581085 GCTGAGAAACGGTCACATAGTTTAT 59.419 40.000 0.00 0.00 38.09 1.40
2467 8026 2.979814 TATGTACAACGCCATGCTCT 57.020 45.000 0.00 0.00 0.00 4.09
2472 8031 1.890876 ACAACGCCATGCTCTTTGTA 58.109 45.000 6.37 0.00 0.00 2.41
2492 8051 7.864108 TTGTATAAAGATGGATGGTCAGTTG 57.136 36.000 0.00 0.00 0.00 3.16
2558 8130 0.519077 GCTCAAGAGAAAGGCAACGG 59.481 55.000 0.32 0.00 46.39 4.44
2584 8156 1.835494 TTTCGAACAACACCCCAACA 58.165 45.000 0.00 0.00 0.00 3.33
2609 8182 6.160576 AGACAAACATGCAACCTTGTAAAT 57.839 33.333 9.77 0.00 32.31 1.40
2673 9505 2.496899 AGGAATCGTGCAACTGGAAT 57.503 45.000 0.00 0.00 31.75 3.01
2709 9541 4.593206 AGGAATCAAGGGTGCGATCTATTA 59.407 41.667 0.00 0.00 0.00 0.98
2736 9568 1.528309 CTGAACCCACGCCCAAGTT 60.528 57.895 0.00 0.00 0.00 2.66
2738 9570 1.527380 GAACCCACGCCCAAGTTGA 60.527 57.895 3.87 0.00 0.00 3.18
2746 9578 1.271379 ACGCCCAAGTTGATAACAGCT 60.271 47.619 3.87 0.00 39.15 4.24
2755 9587 3.859961 AGTTGATAACAGCTCACGATTCG 59.140 43.478 4.14 4.14 32.31 3.34
2758 9590 1.891178 TAACAGCTCACGATTCGACG 58.109 50.000 13.95 3.51 39.31 5.12
2762 9594 0.097325 AGCTCACGATTCGACGTCTC 59.903 55.000 13.95 3.49 44.76 3.36
2768 9600 1.004821 ACGATTCGACGTCTCAGATCG 60.005 52.381 24.62 24.62 43.02 3.69
2776 9608 2.440247 TCTCAGATCGGCGAGGCA 60.440 61.111 17.22 0.00 0.00 4.75
2821 9653 3.070748 GGAACCACTTCTCTTCTCAAGC 58.929 50.000 0.00 0.00 0.00 4.01
2822 9654 2.849294 ACCACTTCTCTTCTCAAGCC 57.151 50.000 0.00 0.00 0.00 4.35
2823 9655 1.349357 ACCACTTCTCTTCTCAAGCCC 59.651 52.381 0.00 0.00 0.00 5.19
2866 9706 0.899019 GAGGTCCAACTCCTCTCCAC 59.101 60.000 4.91 0.00 45.56 4.02
2871 9711 1.717077 TCCAACTCCTCTCCACCTAGT 59.283 52.381 0.00 0.00 0.00 2.57
2872 9712 1.827969 CCAACTCCTCTCCACCTAGTG 59.172 57.143 0.00 0.00 0.00 2.74
2873 9713 1.205893 CAACTCCTCTCCACCTAGTGC 59.794 57.143 0.00 0.00 31.34 4.40
2882 9722 3.578716 TCTCCACCTAGTGCCATATAAGC 59.421 47.826 0.00 0.00 31.34 3.09
2883 9723 2.637872 TCCACCTAGTGCCATATAAGCC 59.362 50.000 0.00 0.00 31.34 4.35
2927 9767 3.011144 TCTGAAATTGTTAGATGGGCCCA 59.989 43.478 30.92 30.92 0.00 5.36
2930 9770 3.756082 AATTGTTAGATGGGCCCAAGA 57.244 42.857 32.58 14.67 0.00 3.02
2978 9818 0.602638 TGCGAGTTTGGGTGCTAGTG 60.603 55.000 0.00 0.00 0.00 2.74
2992 9887 6.156256 TGGGTGCTAGTGATCTTAAGTGTAAT 59.844 38.462 1.63 0.00 0.00 1.89
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.474570 GATCCTGTGGGAGGCGCT 61.475 66.667 7.64 0.00 45.86 5.92
1 2 3.112205 ATGATCCTGTGGGAGGCGC 62.112 63.158 0.00 0.00 45.86 6.53
2 3 1.070445 GATGATCCTGTGGGAGGCG 59.930 63.158 0.00 0.00 45.86 5.52
3 4 1.453669 GGATGATCCTGTGGGAGGC 59.546 63.158 3.71 0.00 45.86 4.70
4 5 0.760567 TCGGATGATCCTGTGGGAGG 60.761 60.000 10.18 0.00 45.86 4.30
5 6 1.346062 ATCGGATGATCCTGTGGGAG 58.654 55.000 10.18 0.00 45.86 4.30
6 7 1.417517 CAATCGGATGATCCTGTGGGA 59.582 52.381 10.18 0.00 46.81 4.37
7 8 1.417517 TCAATCGGATGATCCTGTGGG 59.582 52.381 10.18 0.00 33.30 4.61
8 9 2.487934 GTCAATCGGATGATCCTGTGG 58.512 52.381 10.18 0.00 33.30 4.17
9 10 2.130395 CGTCAATCGGATGATCCTGTG 58.870 52.381 10.18 4.88 33.30 3.66
10 11 2.515926 CGTCAATCGGATGATCCTGT 57.484 50.000 10.18 0.00 33.30 4.00
21 22 4.147322 GTGGTGCGCCGTCAATCG 62.147 66.667 12.58 0.00 37.67 3.34
22 23 2.740714 GAGTGGTGCGCCGTCAATC 61.741 63.158 12.58 5.66 37.67 2.67
23 24 2.742372 GAGTGGTGCGCCGTCAAT 60.742 61.111 12.58 0.00 37.67 2.57
39 40 3.702048 CAAGAACCTCGGGCCCGA 61.702 66.667 42.62 42.62 46.87 5.14
40 41 3.702048 TCAAGAACCTCGGGCCCG 61.702 66.667 39.13 39.13 41.35 6.13
41 42 2.046217 GTCAAGAACCTCGGGCCC 60.046 66.667 13.57 13.57 0.00 5.80
42 43 0.673956 GAAGTCAAGAACCTCGGGCC 60.674 60.000 0.00 0.00 0.00 5.80
43 44 0.321996 AGAAGTCAAGAACCTCGGGC 59.678 55.000 0.00 0.00 0.00 6.13
44 45 2.689646 GAAGAAGTCAAGAACCTCGGG 58.310 52.381 0.00 0.00 0.00 5.14
45 46 2.030185 TCGAAGAAGTCAAGAACCTCGG 60.030 50.000 0.00 0.00 0.00 4.63
46 47 3.284323 TCGAAGAAGTCAAGAACCTCG 57.716 47.619 0.00 0.00 0.00 4.63
47 48 4.561105 ACATCGAAGAAGTCAAGAACCTC 58.439 43.478 0.00 0.00 43.58 3.85
48 49 4.608948 ACATCGAAGAAGTCAAGAACCT 57.391 40.909 0.00 0.00 43.58 3.50
49 50 4.611581 GCAACATCGAAGAAGTCAAGAACC 60.612 45.833 0.00 0.00 37.54 3.62
50 51 4.458708 GCAACATCGAAGAAGTCAAGAAC 58.541 43.478 0.00 0.00 37.54 3.01
51 52 3.498397 GGCAACATCGAAGAAGTCAAGAA 59.502 43.478 0.00 0.00 37.54 2.52
52 53 3.067106 GGCAACATCGAAGAAGTCAAGA 58.933 45.455 0.00 0.00 37.54 3.02
53 54 2.807967 TGGCAACATCGAAGAAGTCAAG 59.192 45.455 0.00 0.00 46.17 3.02
54 55 2.844946 TGGCAACATCGAAGAAGTCAA 58.155 42.857 0.00 0.00 46.17 3.18
55 56 2.542020 TGGCAACATCGAAGAAGTCA 57.458 45.000 0.00 0.00 46.17 3.41
72 73 0.537188 AGGTCTAGCCACGACAATGG 59.463 55.000 6.07 0.00 43.26 3.16
73 74 1.645034 CAGGTCTAGCCACGACAATG 58.355 55.000 6.07 0.00 40.61 2.82
74 75 0.537188 CCAGGTCTAGCCACGACAAT 59.463 55.000 6.07 0.00 40.61 2.71
75 76 1.972198 CCAGGTCTAGCCACGACAA 59.028 57.895 6.07 0.00 40.61 3.18
76 77 2.646175 GCCAGGTCTAGCCACGACA 61.646 63.158 6.07 0.00 40.61 4.35
77 78 2.184579 GCCAGGTCTAGCCACGAC 59.815 66.667 6.07 0.00 40.61 4.34
83 84 1.750780 GCCAAAGGCCAGGTCTAGC 60.751 63.158 5.01 0.00 44.06 3.42
84 85 4.645809 GCCAAAGGCCAGGTCTAG 57.354 61.111 5.01 0.00 44.06 2.43
101 102 4.697756 ACGTGTGGTGGGGCATCG 62.698 66.667 0.00 0.00 0.00 3.84
102 103 2.746277 GACGTGTGGTGGGGCATC 60.746 66.667 0.00 0.00 0.00 3.91
103 104 4.344865 GGACGTGTGGTGGGGCAT 62.345 66.667 0.00 0.00 0.00 4.40
106 107 4.636435 GGTGGACGTGTGGTGGGG 62.636 72.222 0.00 0.00 0.00 4.96
107 108 1.832719 TATGGTGGACGTGTGGTGGG 61.833 60.000 0.00 0.00 0.00 4.61
108 109 0.035598 TTATGGTGGACGTGTGGTGG 59.964 55.000 0.00 0.00 0.00 4.61
109 110 1.737236 CATTATGGTGGACGTGTGGTG 59.263 52.381 0.00 0.00 0.00 4.17
110 111 1.948611 GCATTATGGTGGACGTGTGGT 60.949 52.381 0.00 0.00 0.00 4.16
111 112 0.732571 GCATTATGGTGGACGTGTGG 59.267 55.000 0.00 0.00 0.00 4.17
112 113 0.732571 GGCATTATGGTGGACGTGTG 59.267 55.000 0.00 0.00 0.00 3.82
113 114 0.393808 GGGCATTATGGTGGACGTGT 60.394 55.000 0.00 0.00 0.00 4.49
114 115 1.436195 CGGGCATTATGGTGGACGTG 61.436 60.000 0.00 0.00 0.00 4.49
115 116 1.153249 CGGGCATTATGGTGGACGT 60.153 57.895 0.00 0.00 0.00 4.34
116 117 2.542907 GCGGGCATTATGGTGGACG 61.543 63.158 0.00 0.00 0.00 4.79
117 118 2.193536 GGCGGGCATTATGGTGGAC 61.194 63.158 0.00 0.00 0.00 4.02
118 119 2.194597 GGCGGGCATTATGGTGGA 59.805 61.111 0.00 0.00 0.00 4.02
119 120 2.123939 TGGCGGGCATTATGGTGG 60.124 61.111 0.00 0.00 0.00 4.61
120 121 2.833533 CGTGGCGGGCATTATGGTG 61.834 63.158 7.75 0.00 0.00 4.17
121 122 2.515991 CGTGGCGGGCATTATGGT 60.516 61.111 7.75 0.00 0.00 3.55
122 123 3.964875 GCGTGGCGGGCATTATGG 61.965 66.667 7.75 0.00 0.00 2.74
123 124 3.964875 GGCGTGGCGGGCATTATG 61.965 66.667 7.75 0.00 0.00 1.90
143 144 2.831742 TAGCGGGGCTGTAGACCG 60.832 66.667 9.99 9.99 47.00 4.79
144 145 2.499827 CCTAGCGGGGCTGTAGACC 61.500 68.421 0.00 0.00 44.61 3.85
145 146 3.130227 CCTAGCGGGGCTGTAGAC 58.870 66.667 0.00 0.00 40.10 2.59
155 156 0.320771 GGTGCATGTATCCCTAGCGG 60.321 60.000 0.00 0.00 0.00 5.52
156 157 0.392706 TGGTGCATGTATCCCTAGCG 59.607 55.000 0.00 0.00 0.00 4.26
157 158 1.417890 ACTGGTGCATGTATCCCTAGC 59.582 52.381 0.00 0.00 0.00 3.42
158 159 3.117491 CACTGGTGCATGTATCCCTAG 57.883 52.381 0.00 0.00 0.00 3.02
173 174 2.932234 AAGGACGAGACCGCACTGG 61.932 63.158 0.00 0.00 46.41 4.00
174 175 1.734477 CAAGGACGAGACCGCACTG 60.734 63.158 0.00 0.00 39.95 3.66
175 176 2.651361 CAAGGACGAGACCGCACT 59.349 61.111 0.00 0.00 39.95 4.40
176 177 3.112709 GCAAGGACGAGACCGCAC 61.113 66.667 0.00 0.00 39.95 5.34
177 178 4.717629 CGCAAGGACGAGACCGCA 62.718 66.667 0.00 0.00 39.95 5.69
179 180 4.717629 TGCGCAAGGACGAGACCG 62.718 66.667 8.16 0.00 39.05 4.79
187 188 2.486636 CTAGACACGGTGCGCAAGGA 62.487 60.000 14.00 0.00 38.28 3.36
188 189 2.048597 TAGACACGGTGCGCAAGG 60.049 61.111 14.00 9.94 38.28 3.61
189 190 0.109458 TACTAGACACGGTGCGCAAG 60.109 55.000 14.00 12.72 43.44 4.01
190 191 0.109458 CTACTAGACACGGTGCGCAA 60.109 55.000 14.00 0.00 0.00 4.85
191 192 1.504900 CTACTAGACACGGTGCGCA 59.495 57.895 5.66 5.66 0.00 6.09
192 193 1.872679 GCTACTAGACACGGTGCGC 60.873 63.158 8.30 0.00 0.00 6.09
193 194 0.100682 ATGCTACTAGACACGGTGCG 59.899 55.000 8.30 0.00 0.00 5.34
194 195 1.134367 TGATGCTACTAGACACGGTGC 59.866 52.381 8.30 1.14 0.00 5.01
195 196 3.066760 TGATGATGCTACTAGACACGGTG 59.933 47.826 6.58 6.58 0.00 4.94
196 197 3.066900 GTGATGATGCTACTAGACACGGT 59.933 47.826 0.00 0.00 0.00 4.83
197 198 3.633235 GTGATGATGCTACTAGACACGG 58.367 50.000 0.00 0.00 0.00 4.94
198 199 3.002348 TCGTGATGATGCTACTAGACACG 59.998 47.826 0.00 0.00 46.76 4.49
199 200 4.553756 TCGTGATGATGCTACTAGACAC 57.446 45.455 0.00 0.00 0.00 3.67
200 201 4.398044 TGTTCGTGATGATGCTACTAGACA 59.602 41.667 0.00 0.00 0.00 3.41
201 202 4.735822 GTGTTCGTGATGATGCTACTAGAC 59.264 45.833 0.00 0.00 0.00 2.59
202 203 4.202020 GGTGTTCGTGATGATGCTACTAGA 60.202 45.833 0.00 0.00 0.00 2.43
203 204 4.045104 GGTGTTCGTGATGATGCTACTAG 58.955 47.826 0.00 0.00 0.00 2.57
204 205 3.488553 CGGTGTTCGTGATGATGCTACTA 60.489 47.826 0.00 0.00 0.00 1.82
205 206 2.735444 CGGTGTTCGTGATGATGCTACT 60.735 50.000 0.00 0.00 0.00 2.57
206 207 1.588404 CGGTGTTCGTGATGATGCTAC 59.412 52.381 0.00 0.00 0.00 3.58
207 208 1.921243 CGGTGTTCGTGATGATGCTA 58.079 50.000 0.00 0.00 0.00 3.49
208 209 2.754648 CGGTGTTCGTGATGATGCT 58.245 52.632 0.00 0.00 0.00 3.79
225 226 2.867472 GGACATGGCCGACAAACG 59.133 61.111 0.00 0.00 42.18 3.60
233 234 1.521681 GTAGCACTCGGACATGGCC 60.522 63.158 7.86 7.86 0.00 5.36
234 235 1.084370 GTGTAGCACTCGGACATGGC 61.084 60.000 0.00 0.00 0.00 4.40
235 236 0.802222 CGTGTAGCACTCGGACATGG 60.802 60.000 0.00 0.00 32.18 3.66
236 237 0.109272 ACGTGTAGCACTCGGACATG 60.109 55.000 12.78 0.00 39.16 3.21
237 238 0.170561 GACGTGTAGCACTCGGACAT 59.829 55.000 0.00 0.00 39.16 3.06
238 239 1.577922 GACGTGTAGCACTCGGACA 59.422 57.895 0.00 0.00 39.16 4.02
239 240 1.154073 GGACGTGTAGCACTCGGAC 60.154 63.158 0.00 7.91 39.16 4.79
240 241 1.303074 AGGACGTGTAGCACTCGGA 60.303 57.895 0.00 0.00 39.16 4.55
241 242 1.154016 CAGGACGTGTAGCACTCGG 60.154 63.158 0.00 0.00 39.16 4.63
242 243 1.154016 CCAGGACGTGTAGCACTCG 60.154 63.158 0.00 8.49 40.48 4.18
243 244 0.388649 CACCAGGACGTGTAGCACTC 60.389 60.000 0.00 0.00 31.34 3.51
244 245 1.666011 CACCAGGACGTGTAGCACT 59.334 57.895 0.00 0.00 31.34 4.40
245 246 1.374252 CCACCAGGACGTGTAGCAC 60.374 63.158 0.00 0.00 36.89 4.40
246 247 1.812686 GACCACCAGGACGTGTAGCA 61.813 60.000 0.00 0.00 38.69 3.49
247 248 1.080025 GACCACCAGGACGTGTAGC 60.080 63.158 0.00 0.00 38.69 3.58
248 249 1.590147 GGACCACCAGGACGTGTAG 59.410 63.158 0.00 0.00 38.69 2.74
249 250 2.270257 CGGACCACCAGGACGTGTA 61.270 63.158 0.00 0.00 38.69 2.90
250 251 3.612681 CGGACCACCAGGACGTGT 61.613 66.667 0.00 0.00 38.69 4.49
251 252 4.373116 CCGGACCACCAGGACGTG 62.373 72.222 0.00 0.00 37.20 4.49
269 270 2.806856 GAAGCTGCAGACGATGGCG 61.807 63.158 20.43 0.00 44.79 5.69
270 271 2.806856 CGAAGCTGCAGACGATGGC 61.807 63.158 20.43 0.00 0.00 4.40
271 272 3.392431 CGAAGCTGCAGACGATGG 58.608 61.111 20.43 1.75 0.00 3.51
284 285 2.588900 CGTCGAAGATTAACGCGAAG 57.411 50.000 15.93 0.00 40.67 3.79
289 290 0.297820 GCAGGCGTCGAAGATTAACG 59.702 55.000 1.37 0.00 40.67 3.18
290 291 0.297820 CGCAGGCGTCGAAGATTAAC 59.702 55.000 5.34 0.00 40.67 2.01
291 292 1.418342 GCGCAGGCGTCGAAGATTAA 61.418 55.000 15.64 0.00 40.67 1.40
292 293 1.876714 GCGCAGGCGTCGAAGATTA 60.877 57.895 15.64 0.00 40.67 1.75
293 294 3.188786 GCGCAGGCGTCGAAGATT 61.189 61.111 15.64 0.00 40.67 2.40
311 312 0.610174 TGTAGAGCCTGAGGTTGCAG 59.390 55.000 0.00 0.00 35.66 4.41
312 313 1.208052 GATGTAGAGCCTGAGGTTGCA 59.792 52.381 0.00 0.00 0.00 4.08
313 314 1.804372 CGATGTAGAGCCTGAGGTTGC 60.804 57.143 0.00 0.00 0.00 4.17
314 315 1.202463 CCGATGTAGAGCCTGAGGTTG 60.202 57.143 0.00 0.00 0.00 3.77
315 316 1.115467 CCGATGTAGAGCCTGAGGTT 58.885 55.000 0.00 0.00 0.00 3.50
316 317 1.395826 GCCGATGTAGAGCCTGAGGT 61.396 60.000 0.00 0.00 0.00 3.85
317 318 1.365633 GCCGATGTAGAGCCTGAGG 59.634 63.158 0.00 0.00 0.00 3.86
318 319 1.007964 CGCCGATGTAGAGCCTGAG 60.008 63.158 0.00 0.00 0.00 3.35
319 320 3.120105 CGCCGATGTAGAGCCTGA 58.880 61.111 0.00 0.00 0.00 3.86
320 321 2.659897 GCGCCGATGTAGAGCCTG 60.660 66.667 0.00 0.00 0.00 4.85
321 322 3.917760 GGCGCCGATGTAGAGCCT 61.918 66.667 12.58 0.00 44.06 4.58
323 324 2.029666 ATGGCGCCGATGTAGAGC 59.970 61.111 23.90 0.00 0.00 4.09
324 325 0.941463 GTCATGGCGCCGATGTAGAG 60.941 60.000 27.09 11.59 0.00 2.43
325 326 1.067416 GTCATGGCGCCGATGTAGA 59.933 57.895 27.09 15.32 0.00 2.59
326 327 2.302952 CGTCATGGCGCCGATGTAG 61.303 63.158 27.09 20.78 0.00 2.74
327 328 1.726533 TACGTCATGGCGCCGATGTA 61.727 55.000 24.22 24.22 33.52 2.29
328 329 3.071232 TACGTCATGGCGCCGATGT 62.071 57.895 25.90 25.90 35.58 3.06
329 330 2.279186 TACGTCATGGCGCCGATG 60.279 61.111 23.90 24.20 34.88 3.84
330 331 2.279252 GTACGTCATGGCGCCGAT 60.279 61.111 23.90 13.76 34.88 4.18
331 332 4.840288 CGTACGTCATGGCGCCGA 62.840 66.667 23.90 11.45 33.44 5.54
333 334 4.807039 ACCGTACGTCATGGCGCC 62.807 66.667 22.73 22.73 36.69 6.53
334 335 3.550992 CACCGTACGTCATGGCGC 61.551 66.667 21.60 3.04 36.69 6.53
335 336 1.226859 ATCACCGTACGTCATGGCG 60.227 57.895 19.93 19.93 36.69 5.69
336 337 1.151777 CCATCACCGTACGTCATGGC 61.152 60.000 18.87 0.00 36.69 4.40
337 338 1.151777 GCCATCACCGTACGTCATGG 61.152 60.000 23.40 23.40 39.49 3.66
338 339 1.479420 CGCCATCACCGTACGTCATG 61.479 60.000 15.21 12.10 0.00 3.07
339 340 1.226859 CGCCATCACCGTACGTCAT 60.227 57.895 15.21 0.00 0.00 3.06
340 341 2.179767 CGCCATCACCGTACGTCA 59.820 61.111 15.21 0.00 0.00 4.35
341 342 2.581409 CCGCCATCACCGTACGTC 60.581 66.667 15.21 0.00 0.00 4.34
342 343 4.807039 GCCGCCATCACCGTACGT 62.807 66.667 15.21 0.00 0.00 3.57
358 359 2.904866 TGTGTTTGTGGCCTCGGC 60.905 61.111 3.32 0.00 41.06 5.54
359 360 1.525995 ACTGTGTTTGTGGCCTCGG 60.526 57.895 3.32 0.00 0.00 4.63
360 361 1.648720 CACTGTGTTTGTGGCCTCG 59.351 57.895 3.32 0.00 0.00 4.63
361 362 1.360192 GCACTGTGTTTGTGGCCTC 59.640 57.895 3.32 0.00 36.08 4.70
362 363 3.525221 GCACTGTGTTTGTGGCCT 58.475 55.556 3.32 0.00 36.08 5.19
365 366 2.026014 GCGGCACTGTGTTTGTGG 59.974 61.111 9.86 0.00 36.08 4.17
366 367 2.352229 CGCGGCACTGTGTTTGTG 60.352 61.111 9.86 2.80 38.36 3.33
367 368 4.250431 GCGCGGCACTGTGTTTGT 62.250 61.111 8.83 0.00 0.00 2.83
387 388 2.686816 CCGATCAAACCGGTGTGCC 61.687 63.158 20.74 12.79 41.91 5.01
388 389 2.867472 CCGATCAAACCGGTGTGC 59.133 61.111 20.74 6.09 41.91 4.57
394 395 0.796312 CAACCAGACCGATCAAACCG 59.204 55.000 0.00 0.00 0.00 4.44
395 396 2.076863 CTCAACCAGACCGATCAAACC 58.923 52.381 0.00 0.00 0.00 3.27
396 397 1.464997 GCTCAACCAGACCGATCAAAC 59.535 52.381 0.00 0.00 0.00 2.93
397 398 1.071542 TGCTCAACCAGACCGATCAAA 59.928 47.619 0.00 0.00 0.00 2.69
398 399 0.684535 TGCTCAACCAGACCGATCAA 59.315 50.000 0.00 0.00 0.00 2.57
399 400 0.904649 ATGCTCAACCAGACCGATCA 59.095 50.000 0.00 0.00 0.00 2.92
400 401 1.134699 TGATGCTCAACCAGACCGATC 60.135 52.381 0.00 0.00 0.00 3.69
401 402 0.904649 TGATGCTCAACCAGACCGAT 59.095 50.000 0.00 0.00 0.00 4.18
402 403 0.904649 ATGATGCTCAACCAGACCGA 59.095 50.000 0.00 0.00 0.00 4.69
403 404 1.012086 CATGATGCTCAACCAGACCG 58.988 55.000 0.00 0.00 0.00 4.79
404 405 1.065199 TCCATGATGCTCAACCAGACC 60.065 52.381 0.00 0.00 0.00 3.85
405 406 2.408271 TCCATGATGCTCAACCAGAC 57.592 50.000 0.00 0.00 0.00 3.51
406 407 2.775960 AGATCCATGATGCTCAACCAGA 59.224 45.455 0.00 0.00 0.00 3.86
407 408 3.210232 AGATCCATGATGCTCAACCAG 57.790 47.619 0.00 0.00 0.00 4.00
408 409 4.776435 TTAGATCCATGATGCTCAACCA 57.224 40.909 0.00 0.00 0.00 3.67
409 410 5.180868 GTGATTAGATCCATGATGCTCAACC 59.819 44.000 0.00 0.00 0.00 3.77
410 411 5.107182 CGTGATTAGATCCATGATGCTCAAC 60.107 44.000 0.00 0.00 0.00 3.18
411 412 4.992951 CGTGATTAGATCCATGATGCTCAA 59.007 41.667 0.00 0.00 0.00 3.02
412 413 4.562143 CCGTGATTAGATCCATGATGCTCA 60.562 45.833 0.00 0.00 0.00 4.26
413 414 3.931468 CCGTGATTAGATCCATGATGCTC 59.069 47.826 0.00 0.00 0.00 4.26
414 415 3.580022 TCCGTGATTAGATCCATGATGCT 59.420 43.478 0.00 0.00 0.00 3.79
415 416 3.681897 GTCCGTGATTAGATCCATGATGC 59.318 47.826 0.00 0.00 0.00 3.91
416 417 4.248859 GGTCCGTGATTAGATCCATGATG 58.751 47.826 0.00 0.00 0.00 3.07
417 418 3.056536 CGGTCCGTGATTAGATCCATGAT 60.057 47.826 2.08 0.00 0.00 2.45
418 419 2.296190 CGGTCCGTGATTAGATCCATGA 59.704 50.000 2.08 0.00 0.00 3.07
419 420 2.296190 TCGGTCCGTGATTAGATCCATG 59.704 50.000 11.88 0.00 0.00 3.66
420 421 2.558795 CTCGGTCCGTGATTAGATCCAT 59.441 50.000 11.88 0.00 0.00 3.41
421 422 1.954382 CTCGGTCCGTGATTAGATCCA 59.046 52.381 11.88 0.00 0.00 3.41
422 423 2.226912 CTCTCGGTCCGTGATTAGATCC 59.773 54.545 15.93 0.00 0.00 3.36
423 424 2.350964 GCTCTCGGTCCGTGATTAGATC 60.351 54.545 15.93 1.16 0.00 2.75
424 425 1.609555 GCTCTCGGTCCGTGATTAGAT 59.390 52.381 15.93 0.00 0.00 1.98
425 426 1.022735 GCTCTCGGTCCGTGATTAGA 58.977 55.000 15.93 7.85 0.00 2.10
426 427 1.025812 AGCTCTCGGTCCGTGATTAG 58.974 55.000 15.93 6.60 0.00 1.73
427 428 1.404391 GAAGCTCTCGGTCCGTGATTA 59.596 52.381 15.93 0.00 0.00 1.75
428 429 0.173708 GAAGCTCTCGGTCCGTGATT 59.826 55.000 15.93 8.91 0.00 2.57
429 430 0.965866 TGAAGCTCTCGGTCCGTGAT 60.966 55.000 15.93 2.19 0.00 3.06
430 431 1.602605 TGAAGCTCTCGGTCCGTGA 60.603 57.895 14.89 14.89 0.00 4.35
431 432 1.444553 GTGAAGCTCTCGGTCCGTG 60.445 63.158 11.88 9.31 0.00 4.94
432 433 2.963371 GTGAAGCTCTCGGTCCGT 59.037 61.111 11.88 0.00 0.00 4.69
433 434 2.196382 TTCGTGAAGCTCTCGGTCCG 62.196 60.000 4.39 4.39 34.54 4.79
434 435 0.456995 CTTCGTGAAGCTCTCGGTCC 60.457 60.000 0.00 0.00 34.54 4.46
435 436 0.522180 TCTTCGTGAAGCTCTCGGTC 59.478 55.000 4.72 0.00 38.28 4.79
436 437 0.959553 TTCTTCGTGAAGCTCTCGGT 59.040 50.000 4.72 0.00 38.28 4.69
437 438 1.623359 CTTCTTCGTGAAGCTCTCGG 58.377 55.000 4.72 0.00 44.62 4.63
445 446 3.578716 ACCTTCCATCTCTTCTTCGTGAA 59.421 43.478 0.00 0.00 0.00 3.18
446 447 3.056536 CACCTTCCATCTCTTCTTCGTGA 60.057 47.826 0.00 0.00 0.00 4.35
447 448 3.056536 TCACCTTCCATCTCTTCTTCGTG 60.057 47.826 0.00 0.00 0.00 4.35
448 449 3.165875 TCACCTTCCATCTCTTCTTCGT 58.834 45.455 0.00 0.00 0.00 3.85
449 450 3.876274 TCACCTTCCATCTCTTCTTCG 57.124 47.619 0.00 0.00 0.00 3.79
450 451 4.512484 CCTTCACCTTCCATCTCTTCTTC 58.488 47.826 0.00 0.00 0.00 2.87
451 452 3.308046 GCCTTCACCTTCCATCTCTTCTT 60.308 47.826 0.00 0.00 0.00 2.52
452 453 2.238395 GCCTTCACCTTCCATCTCTTCT 59.762 50.000 0.00 0.00 0.00 2.85
453 454 2.026822 TGCCTTCACCTTCCATCTCTTC 60.027 50.000 0.00 0.00 0.00 2.87
454 455 1.988107 TGCCTTCACCTTCCATCTCTT 59.012 47.619 0.00 0.00 0.00 2.85
455 456 1.661463 TGCCTTCACCTTCCATCTCT 58.339 50.000 0.00 0.00 0.00 3.10
456 457 2.087646 GTTGCCTTCACCTTCCATCTC 58.912 52.381 0.00 0.00 0.00 2.75
457 458 1.611673 CGTTGCCTTCACCTTCCATCT 60.612 52.381 0.00 0.00 0.00 2.90
458 459 0.804989 CGTTGCCTTCACCTTCCATC 59.195 55.000 0.00 0.00 0.00 3.51
459 460 1.244019 GCGTTGCCTTCACCTTCCAT 61.244 55.000 0.00 0.00 0.00 3.41
460 461 1.896660 GCGTTGCCTTCACCTTCCA 60.897 57.895 0.00 0.00 0.00 3.53
461 462 1.600916 AGCGTTGCCTTCACCTTCC 60.601 57.895 0.00 0.00 0.00 3.46
462 463 0.884704 TCAGCGTTGCCTTCACCTTC 60.885 55.000 0.00 0.00 0.00 3.46
463 464 0.886490 CTCAGCGTTGCCTTCACCTT 60.886 55.000 0.00 0.00 0.00 3.50
464 465 1.302033 CTCAGCGTTGCCTTCACCT 60.302 57.895 0.00 0.00 0.00 4.00
465 466 1.294659 CTCTCAGCGTTGCCTTCACC 61.295 60.000 0.00 0.00 0.00 4.02
466 467 1.294659 CCTCTCAGCGTTGCCTTCAC 61.295 60.000 0.00 0.00 0.00 3.18
467 468 1.004560 CCTCTCAGCGTTGCCTTCA 60.005 57.895 0.00 0.00 0.00 3.02
468 469 1.743252 CCCTCTCAGCGTTGCCTTC 60.743 63.158 0.00 0.00 0.00 3.46
469 470 2.348998 CCCTCTCAGCGTTGCCTT 59.651 61.111 0.00 0.00 0.00 4.35
470 471 3.710722 CCCCTCTCAGCGTTGCCT 61.711 66.667 0.00 0.00 0.00 4.75
471 472 3.254024 TTCCCCTCTCAGCGTTGCC 62.254 63.158 0.00 0.00 0.00 4.52
472 473 2.035442 GTTCCCCTCTCAGCGTTGC 61.035 63.158 0.00 0.00 0.00 4.17
473 474 1.738099 CGTTCCCCTCTCAGCGTTG 60.738 63.158 0.00 0.00 0.00 4.10
474 475 2.657237 CGTTCCCCTCTCAGCGTT 59.343 61.111 0.00 0.00 0.00 4.84
475 476 3.382832 CCGTTCCCCTCTCAGCGT 61.383 66.667 0.00 0.00 0.00 5.07
476 477 4.148825 CCCGTTCCCCTCTCAGCG 62.149 72.222 0.00 0.00 0.00 5.18
477 478 2.683933 TCCCGTTCCCCTCTCAGC 60.684 66.667 0.00 0.00 0.00 4.26
478 479 0.397816 ATCTCCCGTTCCCCTCTCAG 60.398 60.000 0.00 0.00 0.00 3.35
479 480 0.397254 GATCTCCCGTTCCCCTCTCA 60.397 60.000 0.00 0.00 0.00 3.27
480 481 0.397254 TGATCTCCCGTTCCCCTCTC 60.397 60.000 0.00 0.00 0.00 3.20
481 482 0.397816 CTGATCTCCCGTTCCCCTCT 60.398 60.000 0.00 0.00 0.00 3.69
482 483 0.688087 ACTGATCTCCCGTTCCCCTC 60.688 60.000 0.00 0.00 0.00 4.30
483 484 0.978146 CACTGATCTCCCGTTCCCCT 60.978 60.000 0.00 0.00 0.00 4.79
484 485 1.522569 CACTGATCTCCCGTTCCCC 59.477 63.158 0.00 0.00 0.00 4.81
485 486 1.265454 ACCACTGATCTCCCGTTCCC 61.265 60.000 0.00 0.00 0.00 3.97
486 487 0.108138 CACCACTGATCTCCCGTTCC 60.108 60.000 0.00 0.00 0.00 3.62
487 488 0.741221 GCACCACTGATCTCCCGTTC 60.741 60.000 0.00 0.00 0.00 3.95
488 489 1.296715 GCACCACTGATCTCCCGTT 59.703 57.895 0.00 0.00 0.00 4.44
489 490 1.892819 CTGCACCACTGATCTCCCGT 61.893 60.000 0.00 0.00 0.00 5.28
490 491 1.153489 CTGCACCACTGATCTCCCG 60.153 63.158 0.00 0.00 0.00 5.14
491 492 1.451028 GCTGCACCACTGATCTCCC 60.451 63.158 0.00 0.00 0.00 4.30
492 493 1.812922 CGCTGCACCACTGATCTCC 60.813 63.158 0.00 0.00 0.00 3.71
493 494 1.812922 CCGCTGCACCACTGATCTC 60.813 63.158 0.00 0.00 0.00 2.75
494 495 2.267006 CCGCTGCACCACTGATCT 59.733 61.111 0.00 0.00 0.00 2.75
495 496 2.821366 CCCGCTGCACCACTGATC 60.821 66.667 0.00 0.00 0.00 2.92
496 497 4.415150 CCCCGCTGCACCACTGAT 62.415 66.667 0.00 0.00 0.00 2.90
507 508 4.798682 CTCCTACCCACCCCCGCT 62.799 72.222 0.00 0.00 0.00 5.52
509 510 4.410033 ACCTCCTACCCACCCCCG 62.410 72.222 0.00 0.00 0.00 5.73
510 511 2.691252 CACCTCCTACCCACCCCC 60.691 72.222 0.00 0.00 0.00 5.40
511 512 1.689582 CTCACCTCCTACCCACCCC 60.690 68.421 0.00 0.00 0.00 4.95
512 513 0.252558 TTCTCACCTCCTACCCACCC 60.253 60.000 0.00 0.00 0.00 4.61
513 514 1.555533 CTTTCTCACCTCCTACCCACC 59.444 57.143 0.00 0.00 0.00 4.61
514 515 2.537143 TCTTTCTCACCTCCTACCCAC 58.463 52.381 0.00 0.00 0.00 4.61
515 516 3.269592 TTCTTTCTCACCTCCTACCCA 57.730 47.619 0.00 0.00 0.00 4.51
516 517 3.307550 GGTTTCTTTCTCACCTCCTACCC 60.308 52.174 0.00 0.00 0.00 3.69
517 518 3.307550 GGGTTTCTTTCTCACCTCCTACC 60.308 52.174 0.00 0.00 0.00 3.18
518 519 3.583526 AGGGTTTCTTTCTCACCTCCTAC 59.416 47.826 0.00 0.00 0.00 3.18
519 520 3.838903 GAGGGTTTCTTTCTCACCTCCTA 59.161 47.826 0.00 0.00 38.80 2.94
520 521 2.640332 GAGGGTTTCTTTCTCACCTCCT 59.360 50.000 0.00 0.00 38.80 3.69
521 522 2.613223 CGAGGGTTTCTTTCTCACCTCC 60.613 54.545 0.00 0.00 41.02 4.30
522 523 2.613223 CCGAGGGTTTCTTTCTCACCTC 60.613 54.545 0.00 0.00 40.76 3.85
523 524 1.348036 CCGAGGGTTTCTTTCTCACCT 59.652 52.381 0.00 0.00 0.00 4.00
524 525 1.610886 CCCGAGGGTTTCTTTCTCACC 60.611 57.143 0.00 0.00 0.00 4.02
525 526 1.809684 CCCGAGGGTTTCTTTCTCAC 58.190 55.000 0.00 0.00 0.00 3.51
539 540 1.261238 AAAGGCTCCTCTCACCCGAG 61.261 60.000 0.00 0.00 40.98 4.63
540 541 0.040646 TAAAGGCTCCTCTCACCCGA 59.959 55.000 0.00 0.00 0.00 5.14
541 542 1.123928 ATAAAGGCTCCTCTCACCCG 58.876 55.000 0.00 0.00 0.00 5.28
542 543 2.037902 GCTATAAAGGCTCCTCTCACCC 59.962 54.545 0.00 0.00 0.00 4.61
543 544 2.037902 GGCTATAAAGGCTCCTCTCACC 59.962 54.545 0.00 0.00 44.73 4.02
544 545 3.394674 GGCTATAAAGGCTCCTCTCAC 57.605 52.381 0.00 0.00 44.73 3.51
554 555 4.689345 GGCACGTGTATAAGGCTATAAAGG 59.311 45.833 18.38 0.00 0.00 3.11
555 556 5.840940 GGCACGTGTATAAGGCTATAAAG 57.159 43.478 18.38 0.00 0.00 1.85
574 575 2.359850 GTCAATGGGTGCTCGGCA 60.360 61.111 0.00 0.00 35.60 5.69
575 576 1.675641 AAGTCAATGGGTGCTCGGC 60.676 57.895 0.00 0.00 0.00 5.54
576 577 0.321564 TCAAGTCAATGGGTGCTCGG 60.322 55.000 0.00 0.00 0.00 4.63
577 578 0.798776 GTCAAGTCAATGGGTGCTCG 59.201 55.000 0.00 0.00 0.00 5.03
578 579 1.168714 GGTCAAGTCAATGGGTGCTC 58.831 55.000 0.00 0.00 0.00 4.26
579 580 0.478072 TGGTCAAGTCAATGGGTGCT 59.522 50.000 0.00 0.00 0.00 4.40
580 581 0.883833 CTGGTCAAGTCAATGGGTGC 59.116 55.000 0.00 0.00 0.00 5.01
581 582 2.276732 ACTGGTCAAGTCAATGGGTG 57.723 50.000 0.00 0.00 31.64 4.61
582 583 3.312736 AAACTGGTCAAGTCAATGGGT 57.687 42.857 0.00 0.00 38.56 4.51
583 584 4.218417 CCTAAAACTGGTCAAGTCAATGGG 59.782 45.833 0.00 0.00 38.56 4.00
584 585 4.321230 GCCTAAAACTGGTCAAGTCAATGG 60.321 45.833 0.00 0.00 38.56 3.16
585 586 4.278170 TGCCTAAAACTGGTCAAGTCAATG 59.722 41.667 0.00 0.00 38.56 2.82
586 587 4.469657 TGCCTAAAACTGGTCAAGTCAAT 58.530 39.130 0.00 0.00 38.56 2.57
587 588 3.882888 CTGCCTAAAACTGGTCAAGTCAA 59.117 43.478 0.00 0.00 38.56 3.18
588 589 3.118038 ACTGCCTAAAACTGGTCAAGTCA 60.118 43.478 0.00 0.00 38.56 3.41
589 590 3.477530 ACTGCCTAAAACTGGTCAAGTC 58.522 45.455 0.00 0.00 38.56 3.01
590 591 3.577805 ACTGCCTAAAACTGGTCAAGT 57.422 42.857 0.00 0.00 42.60 3.16
591 592 6.385649 TTTTACTGCCTAAAACTGGTCAAG 57.614 37.500 0.00 0.00 30.64 3.02
592 593 6.777213 TTTTTACTGCCTAAAACTGGTCAA 57.223 33.333 0.00 0.00 34.61 3.18
613 614 9.639601 CTTTACTGAGGTTTTTCTTGAGTTTTT 57.360 29.630 0.00 0.00 0.00 1.94
614 615 9.020731 TCTTTACTGAGGTTTTTCTTGAGTTTT 57.979 29.630 0.00 0.00 0.00 2.43
615 616 8.575649 TCTTTACTGAGGTTTTTCTTGAGTTT 57.424 30.769 0.00 0.00 0.00 2.66
616 617 8.575649 TTCTTTACTGAGGTTTTTCTTGAGTT 57.424 30.769 0.00 0.00 0.00 3.01
617 618 8.459635 GTTTCTTTACTGAGGTTTTTCTTGAGT 58.540 33.333 0.00 0.00 0.00 3.41
618 619 7.640240 CGTTTCTTTACTGAGGTTTTTCTTGAG 59.360 37.037 0.00 0.00 0.00 3.02
619 620 7.120138 ACGTTTCTTTACTGAGGTTTTTCTTGA 59.880 33.333 0.00 0.00 0.00 3.02
620 621 7.248437 ACGTTTCTTTACTGAGGTTTTTCTTG 58.752 34.615 0.00 0.00 0.00 3.02
621 622 7.387119 ACGTTTCTTTACTGAGGTTTTTCTT 57.613 32.000 0.00 0.00 0.00 2.52
622 623 6.997239 ACGTTTCTTTACTGAGGTTTTTCT 57.003 33.333 0.00 0.00 0.00 2.52
623 624 7.128331 GGTACGTTTCTTTACTGAGGTTTTTC 58.872 38.462 0.00 0.00 0.00 2.29
624 625 7.019774 GGTACGTTTCTTTACTGAGGTTTTT 57.980 36.000 0.00 0.00 0.00 1.94
625 626 6.609237 GGTACGTTTCTTTACTGAGGTTTT 57.391 37.500 0.00 0.00 0.00 2.43
654 655 9.032624 GGCCCAAGTTCTATCTACATATACTAA 57.967 37.037 0.00 0.00 0.00 2.24
655 656 7.338703 CGGCCCAAGTTCTATCTACATATACTA 59.661 40.741 0.00 0.00 0.00 1.82
656 657 6.153000 CGGCCCAAGTTCTATCTACATATACT 59.847 42.308 0.00 0.00 0.00 2.12
657 658 6.331061 CGGCCCAAGTTCTATCTACATATAC 58.669 44.000 0.00 0.00 0.00 1.47
658 659 5.421056 CCGGCCCAAGTTCTATCTACATATA 59.579 44.000 0.00 0.00 0.00 0.86
659 660 4.223032 CCGGCCCAAGTTCTATCTACATAT 59.777 45.833 0.00 0.00 0.00 1.78
660 661 3.576982 CCGGCCCAAGTTCTATCTACATA 59.423 47.826 0.00 0.00 0.00 2.29
661 662 2.368875 CCGGCCCAAGTTCTATCTACAT 59.631 50.000 0.00 0.00 0.00 2.29
662 663 1.760613 CCGGCCCAAGTTCTATCTACA 59.239 52.381 0.00 0.00 0.00 2.74
663 664 1.540580 GCCGGCCCAAGTTCTATCTAC 60.541 57.143 18.11 0.00 0.00 2.59
664 665 0.756903 GCCGGCCCAAGTTCTATCTA 59.243 55.000 18.11 0.00 0.00 1.98
665 666 1.527370 GCCGGCCCAAGTTCTATCT 59.473 57.895 18.11 0.00 0.00 1.98
666 667 1.526225 GGCCGGCCCAAGTTCTATC 60.526 63.158 36.64 4.38 0.00 2.08
667 668 2.595655 GGCCGGCCCAAGTTCTAT 59.404 61.111 36.64 0.00 0.00 1.98
677 678 3.493699 GGATTTTATAAAAAGGGCCGGCC 60.494 47.826 38.57 38.57 0.00 6.13
678 679 3.386726 AGGATTTTATAAAAAGGGCCGGC 59.613 43.478 21.18 21.18 0.00 6.13
679 680 6.492087 TCATAGGATTTTATAAAAAGGGCCGG 59.508 38.462 14.35 0.00 0.00 6.13
680 681 7.519032 TCATAGGATTTTATAAAAAGGGCCG 57.481 36.000 14.35 3.70 0.00 6.13
681 682 8.367911 CCTTCATAGGATTTTATAAAAAGGGCC 58.632 37.037 14.35 12.63 45.05 5.80
682 683 9.143155 TCCTTCATAGGATTTTATAAAAAGGGC 57.857 33.333 14.35 5.17 45.82 5.19
695 696 7.256980 GGATTCTCCTTGATCCTTCATAGGATT 60.257 40.741 8.04 0.00 45.96 3.01
697 698 5.545723 GGATTCTCCTTGATCCTTCATAGGA 59.454 44.000 0.00 0.00 43.41 2.94
698 699 5.280419 GGGATTCTCCTTGATCCTTCATAGG 60.280 48.000 2.74 0.00 38.67 2.57
699 700 5.280419 GGGGATTCTCCTTGATCCTTCATAG 60.280 48.000 0.00 0.00 36.57 2.23
700 701 4.599241 GGGGATTCTCCTTGATCCTTCATA 59.401 45.833 0.00 0.00 36.57 2.15
701 702 3.397282 GGGGATTCTCCTTGATCCTTCAT 59.603 47.826 0.00 0.00 36.57 2.57
702 703 2.780010 GGGGATTCTCCTTGATCCTTCA 59.220 50.000 0.00 0.00 36.57 3.02
703 704 3.052329 AGGGGATTCTCCTTGATCCTTC 58.948 50.000 0.00 0.00 36.57 3.46
704 705 3.052329 GAGGGGATTCTCCTTGATCCTT 58.948 50.000 6.53 0.00 36.57 3.36
705 706 2.252408 AGAGGGGATTCTCCTTGATCCT 59.748 50.000 6.53 0.00 36.57 3.24
706 707 2.700354 AGAGGGGATTCTCCTTGATCC 58.300 52.381 6.53 0.00 36.57 3.36
707 708 4.787135 AAAGAGGGGATTCTCCTTGATC 57.213 45.455 6.53 0.00 36.57 2.92
708 709 4.293368 ACAAAAGAGGGGATTCTCCTTGAT 59.707 41.667 6.53 0.00 36.57 2.57
724 725 5.074804 TCCTATCCGATCCGATACAAAAGA 58.925 41.667 0.23 0.00 0.00 2.52
736 737 4.383552 CCCTTGGATGAATCCTATCCGATC 60.384 50.000 10.61 0.00 45.70 3.69
751 752 2.573463 TCTTTCCCTTAGCCCTTGGAT 58.427 47.619 0.00 0.00 0.00 3.41
754 755 4.152647 AGTTTTCTTTCCCTTAGCCCTTG 58.847 43.478 0.00 0.00 0.00 3.61
760 761 4.320275 GCGGACAAGTTTTCTTTCCCTTAG 60.320 45.833 0.00 0.00 38.17 2.18
761 762 3.566742 GCGGACAAGTTTTCTTTCCCTTA 59.433 43.478 0.00 0.00 38.17 2.69
791 793 1.451567 TCTCCTTCGCCGAGATCGT 60.452 57.895 1.09 0.00 37.74 3.73
793 795 1.360911 GGTCTCCTTCGCCGAGATC 59.639 63.158 0.00 0.00 38.58 2.75
834 846 5.677319 TCGTAGATTTTGGTGAGGATTCT 57.323 39.130 0.00 0.00 0.00 2.40
838 850 6.150474 GGAAATTTCGTAGATTTTGGTGAGGA 59.850 38.462 11.95 0.00 35.04 3.71
839 851 6.072175 TGGAAATTTCGTAGATTTTGGTGAGG 60.072 38.462 11.95 0.00 35.04 3.86
865 880 2.586258 ATCGATCGGGTTTCAGTCTG 57.414 50.000 16.41 0.00 0.00 3.51
869 884 5.415077 ACCTATACTATCGATCGGGTTTCAG 59.585 44.000 16.41 6.19 0.00 3.02
943 958 8.619546 GCTCCGTCCTATATAATATAAGAACGT 58.380 37.037 0.00 0.00 0.00 3.99
944 959 7.797587 CGCTCCGTCCTATATAATATAAGAACG 59.202 40.741 0.00 0.00 0.00 3.95
945 960 8.834465 TCGCTCCGTCCTATATAATATAAGAAC 58.166 37.037 0.00 0.00 0.00 3.01
946 961 8.969260 TCGCTCCGTCCTATATAATATAAGAA 57.031 34.615 0.00 0.00 0.00 2.52
947 962 8.209584 ACTCGCTCCGTCCTATATAATATAAGA 58.790 37.037 0.00 0.00 0.00 2.10
948 963 8.380743 ACTCGCTCCGTCCTATATAATATAAG 57.619 38.462 0.00 0.00 0.00 1.73
949 964 9.836864 TTACTCGCTCCGTCCTATATAATATAA 57.163 33.333 0.00 0.00 0.00 0.98
951 966 8.921353 ATTACTCGCTCCGTCCTATATAATAT 57.079 34.615 0.00 0.00 0.00 1.28
952 967 8.618677 CAATTACTCGCTCCGTCCTATATAATA 58.381 37.037 0.00 0.00 0.00 0.98
953 968 7.481642 CAATTACTCGCTCCGTCCTATATAAT 58.518 38.462 0.00 0.00 0.00 1.28
954 969 6.624423 GCAATTACTCGCTCCGTCCTATATAA 60.624 42.308 0.00 0.00 0.00 0.98
955 970 5.163683 GCAATTACTCGCTCCGTCCTATATA 60.164 44.000 0.00 0.00 0.00 0.86
956 971 4.380655 GCAATTACTCGCTCCGTCCTATAT 60.381 45.833 0.00 0.00 0.00 0.86
957 972 3.057736 GCAATTACTCGCTCCGTCCTATA 60.058 47.826 0.00 0.00 0.00 1.31
958 973 2.288273 GCAATTACTCGCTCCGTCCTAT 60.288 50.000 0.00 0.00 0.00 2.57
959 974 1.066605 GCAATTACTCGCTCCGTCCTA 59.933 52.381 0.00 0.00 0.00 2.94
960 975 0.179108 GCAATTACTCGCTCCGTCCT 60.179 55.000 0.00 0.00 0.00 3.85
961 976 0.179108 AGCAATTACTCGCTCCGTCC 60.179 55.000 0.00 0.00 31.16 4.79
962 977 1.324736 CAAGCAATTACTCGCTCCGTC 59.675 52.381 0.00 0.00 37.54 4.79
963 978 1.359848 CAAGCAATTACTCGCTCCGT 58.640 50.000 0.00 0.00 37.54 4.69
964 979 0.026803 GCAAGCAATTACTCGCTCCG 59.973 55.000 0.00 0.00 37.54 4.63
965 980 1.063174 CTGCAAGCAATTACTCGCTCC 59.937 52.381 0.00 0.00 37.54 4.70
966 981 1.063174 CCTGCAAGCAATTACTCGCTC 59.937 52.381 0.00 0.00 37.54 5.03
967 982 1.089920 CCTGCAAGCAATTACTCGCT 58.910 50.000 0.00 0.00 41.20 4.93
968 983 1.086696 TCCTGCAAGCAATTACTCGC 58.913 50.000 0.00 0.00 0.00 5.03
969 984 1.061131 CGTCCTGCAAGCAATTACTCG 59.939 52.381 0.00 0.00 0.00 4.18
970 985 1.398390 CCGTCCTGCAAGCAATTACTC 59.602 52.381 0.00 0.00 0.00 2.59
971 986 1.453155 CCGTCCTGCAAGCAATTACT 58.547 50.000 0.00 0.00 0.00 2.24
972 987 0.179163 GCCGTCCTGCAAGCAATTAC 60.179 55.000 0.00 0.00 0.00 1.89
973 988 1.312371 GGCCGTCCTGCAAGCAATTA 61.312 55.000 0.00 0.00 0.00 1.40
974 989 2.639327 GGCCGTCCTGCAAGCAATT 61.639 57.895 0.00 0.00 0.00 2.32
987 1002 1.153369 CGACATGGATCTTGGCCGT 60.153 57.895 0.00 0.00 0.00 5.68
992 1007 1.769098 CGCTGCCGACATGGATCTTG 61.769 60.000 0.00 0.00 42.00 3.02
1066 1081 4.214327 CGAGAAGAGCCCCTCCGC 62.214 72.222 0.00 0.00 0.00 5.54
1086 1101 1.670406 CACGAGCCTGCTTCTGCTT 60.670 57.895 0.00 0.00 38.11 3.91
1131 1146 3.258372 TCGCTGAGGTAAAAGATGTCAGT 59.742 43.478 0.00 0.00 37.54 3.41
1139 2563 4.217550 TGGGAAAAATCGCTGAGGTAAAAG 59.782 41.667 0.00 0.00 0.00 2.27
1150 2574 1.466950 TGATGACGTGGGAAAAATCGC 59.533 47.619 0.00 0.00 0.00 4.58
1151 2575 3.822594 TTGATGACGTGGGAAAAATCG 57.177 42.857 0.00 0.00 0.00 3.34
1152 2576 5.371115 TCTTTGATGACGTGGGAAAAATC 57.629 39.130 0.00 0.00 0.00 2.17
1153 2577 5.476599 TGATCTTTGATGACGTGGGAAAAAT 59.523 36.000 0.00 0.00 0.00 1.82
1157 2581 3.334691 GTGATCTTTGATGACGTGGGAA 58.665 45.455 0.00 0.00 0.00 3.97
1158 2582 2.673893 CGTGATCTTTGATGACGTGGGA 60.674 50.000 10.46 0.00 0.00 4.37
1159 2583 1.660607 CGTGATCTTTGATGACGTGGG 59.339 52.381 10.46 0.00 0.00 4.61
1160 2584 2.337583 ACGTGATCTTTGATGACGTGG 58.662 47.619 20.30 0.00 41.44 4.94
1172 2596 0.101399 GTCGCTCCATGACGTGATCT 59.899 55.000 0.00 0.00 0.00 2.75
1184 2608 3.181496 GGAAAGAATTGGATTGTCGCTCC 60.181 47.826 0.00 0.00 0.00 4.70
1203 2627 3.740764 GCAAGTTGCTGTTTCCATTGGAA 60.741 43.478 20.71 14.24 40.96 3.53
1204 2628 2.224018 GCAAGTTGCTGTTTCCATTGGA 60.224 45.455 20.71 0.00 40.96 3.53
1205 2629 2.137523 GCAAGTTGCTGTTTCCATTGG 58.862 47.619 20.71 0.00 40.96 3.16
1206 2630 2.823984 TGCAAGTTGCTGTTTCCATTG 58.176 42.857 27.17 0.00 45.31 2.82
1230 2654 5.000012 ACGAGAAGCGAAGTCATCTTAAT 58.000 39.130 0.00 0.00 44.57 1.40
1244 2668 4.929808 TGTCTCCAAATAGAAACGAGAAGC 59.070 41.667 0.00 0.00 31.70 3.86
1251 2675 9.185192 CATTCAAACTTGTCTCCAAATAGAAAC 57.815 33.333 0.00 0.00 0.00 2.78
1285 2715 6.708054 GTGTATGATGCTAGGTAATCTTGCTT 59.292 38.462 0.00 0.00 43.12 3.91
1357 5646 9.995957 CTAAATACGGATGTATCTAGTCAGATG 57.004 37.037 0.00 0.00 41.75 2.90
1358 5647 9.961264 TCTAAATACGGATGTATCTAGTCAGAT 57.039 33.333 0.00 0.00 40.42 2.90
1360 5649 9.000486 TGTCTAAATACGGATGTATCTAGTCAG 58.000 37.037 0.00 0.00 40.42 3.51
1381 5685 9.967346 CCATAATTCTCGTCTTAGATTTGTCTA 57.033 33.333 0.00 0.00 0.00 2.59
1397 5701 3.970640 ACTCCCTCAGTCCCATAATTCTC 59.029 47.826 0.00 0.00 0.00 2.87
1399 5703 4.902448 AGTACTCCCTCAGTCCCATAATTC 59.098 45.833 0.00 0.00 36.43 2.17
1402 5706 4.030913 CAAGTACTCCCTCAGTCCCATAA 58.969 47.826 0.00 0.00 36.43 1.90
1404 5708 2.225650 ACAAGTACTCCCTCAGTCCCAT 60.226 50.000 0.00 0.00 36.43 4.00
1411 5715 5.367352 TCAAGGTTAAACAAGTACTCCCTCA 59.633 40.000 0.00 0.00 0.00 3.86
1453 5757 1.972872 AACAAGAGCCCTGTTCAGTG 58.027 50.000 0.00 0.00 0.00 3.66
1454 5758 2.736670 AAACAAGAGCCCTGTTCAGT 57.263 45.000 0.00 0.00 0.00 3.41
1455 5759 5.712152 AATTAAACAAGAGCCCTGTTCAG 57.288 39.130 0.00 0.00 0.00 3.02
1456 5760 5.183140 GCTAATTAAACAAGAGCCCTGTTCA 59.817 40.000 0.00 0.00 0.00 3.18
1457 5761 5.183140 TGCTAATTAAACAAGAGCCCTGTTC 59.817 40.000 0.00 0.00 31.98 3.18
1458 5762 5.076873 TGCTAATTAAACAAGAGCCCTGTT 58.923 37.500 0.00 0.00 31.98 3.16
1459 5763 4.662278 TGCTAATTAAACAAGAGCCCTGT 58.338 39.130 0.00 0.00 31.98 4.00
1460 5764 5.402398 GTTGCTAATTAAACAAGAGCCCTG 58.598 41.667 1.77 0.00 31.98 4.45
1461 5765 4.462834 GGTTGCTAATTAAACAAGAGCCCT 59.537 41.667 3.18 0.00 31.98 5.19
1462 5766 4.219725 TGGTTGCTAATTAAACAAGAGCCC 59.780 41.667 3.18 2.12 31.98 5.19
1466 5770 7.113658 TGGTTTGGTTGCTAATTAAACAAGA 57.886 32.000 0.00 0.00 36.24 3.02
1470 5774 6.764085 AGGTTTGGTTTGGTTGCTAATTAAAC 59.236 34.615 0.00 0.00 0.00 2.01
1570 5954 8.283291 AGTATTAATTACTTAAGCGCTGATTGC 58.717 33.333 12.58 0.00 37.96 3.56
1594 5978 8.267183 TGATCAATGTACTTTGTATCATGGAGT 58.733 33.333 18.04 0.00 0.00 3.85
1622 6006 5.612725 TGCTGGATTGACACACATAGATA 57.387 39.130 0.00 0.00 0.00 1.98
1628 6012 0.883153 GCATGCTGGATTGACACACA 59.117 50.000 11.37 0.00 0.00 3.72
1661 6045 3.918220 CTGTTGGATCTCGCGCGC 61.918 66.667 27.95 23.91 0.00 6.86
1666 6050 3.610242 CGTCTTTCTTCTGTTGGATCTCG 59.390 47.826 0.00 0.00 0.00 4.04
1675 6059 2.095161 CCGTAGCTCGTCTTTCTTCTGT 60.095 50.000 0.00 0.00 37.94 3.41
1696 6080 3.321497 CATCGCCTTAGATACCAAGCTC 58.679 50.000 0.00 0.00 0.00 4.09
1698 6082 1.801178 GCATCGCCTTAGATACCAAGC 59.199 52.381 0.00 0.00 0.00 4.01
1715 6099 0.110486 ACCTCCACTTTGTTCCGCAT 59.890 50.000 0.00 0.00 0.00 4.73
1719 6103 4.015872 TCATACACCTCCACTTTGTTCC 57.984 45.455 0.00 0.00 0.00 3.62
1723 6107 4.326826 ACACATCATACACCTCCACTTTG 58.673 43.478 0.00 0.00 0.00 2.77
1727 6111 4.081087 ACCTAACACATCATACACCTCCAC 60.081 45.833 0.00 0.00 0.00 4.02
1728 6112 4.101114 ACCTAACACATCATACACCTCCA 58.899 43.478 0.00 0.00 0.00 3.86
1733 6117 5.424757 TGCCTTACCTAACACATCATACAC 58.575 41.667 0.00 0.00 0.00 2.90
1739 6123 6.817184 TCTTATCTGCCTTACCTAACACATC 58.183 40.000 0.00 0.00 0.00 3.06
1740 6124 6.808321 TCTTATCTGCCTTACCTAACACAT 57.192 37.500 0.00 0.00 0.00 3.21
1741 6125 6.614694 TTCTTATCTGCCTTACCTAACACA 57.385 37.500 0.00 0.00 0.00 3.72
1747 6131 6.156949 TCTCACAATTCTTATCTGCCTTACCT 59.843 38.462 0.00 0.00 0.00 3.08
1759 6143 6.874134 GCTTACCAAGAGTCTCACAATTCTTA 59.126 38.462 1.94 0.00 0.00 2.10
1787 6171 0.038159 AGTGCTAGTGGAAGCGTGTC 60.038 55.000 0.00 0.00 45.85 3.67
1791 6175 0.037326 TTGGAGTGCTAGTGGAAGCG 60.037 55.000 0.00 0.00 45.85 4.68
1809 6193 2.770232 ACTTTCCCCCGAGAACGATATT 59.230 45.455 0.00 0.00 42.66 1.28
1815 6199 0.034476 AACGACTTTCCCCCGAGAAC 59.966 55.000 0.00 0.00 0.00 3.01
1825 6209 3.768468 TGTGGTTTTGGAACGACTTTC 57.232 42.857 0.00 0.00 42.75 2.62
1852 6236 7.741027 TCTCTGATATTGTACGTACCTAAGG 57.259 40.000 22.43 7.40 0.00 2.69
1865 6250 9.269453 TGCATCTAGTTTGATTCTCTGATATTG 57.731 33.333 0.00 0.00 0.00 1.90
1884 6271 6.769341 AGTGATTTTACATCTGCATGCATCTA 59.231 34.615 22.97 10.46 32.57 1.98
1960 6349 5.130350 CAGGTCCTACAGGTCAAAAGAAAA 58.870 41.667 0.00 0.00 36.34 2.29
1961 6350 4.445735 CCAGGTCCTACAGGTCAAAAGAAA 60.446 45.833 0.00 0.00 36.34 2.52
1962 6351 3.072476 CCAGGTCCTACAGGTCAAAAGAA 59.928 47.826 0.00 0.00 36.34 2.52
2046 7584 6.983890 ACTAACCACAAAAGCAATAACCAAAG 59.016 34.615 0.00 0.00 0.00 2.77
2055 7593 3.886505 CCTACCACTAACCACAAAAGCAA 59.113 43.478 0.00 0.00 0.00 3.91
2060 7598 2.037511 CGACCCTACCACTAACCACAAA 59.962 50.000 0.00 0.00 0.00 2.83
2071 7609 2.675242 CCCATTGCCGACCCTACCA 61.675 63.158 0.00 0.00 0.00 3.25
2073 7611 1.339644 TACCCCATTGCCGACCCTAC 61.340 60.000 0.00 0.00 0.00 3.18
2079 7617 0.968393 GGCTTTTACCCCATTGCCGA 60.968 55.000 0.00 0.00 0.00 5.54
2139 7677 4.629251 GAGCCATCTTTGGTTCTCAATC 57.371 45.455 2.05 0.00 46.62 2.67
2195 7739 0.890683 GTAGTGCCAGCAAGCCAAAT 59.109 50.000 0.00 0.00 0.00 2.32
2203 7751 1.119684 ACCATATCGTAGTGCCAGCA 58.880 50.000 0.00 0.00 0.00 4.41
2207 7755 3.173668 TCACAACCATATCGTAGTGCC 57.826 47.619 0.00 0.00 0.00 5.01
2244 7792 8.645730 TCGGATAGATAGAGATACGATAACAC 57.354 38.462 0.00 0.00 33.50 3.32
2359 7908 4.058505 AGGGGGAGGCCTTGGGAT 62.059 66.667 6.77 0.00 0.00 3.85
2386 7937 9.848710 TGCTATCTACTAGTTAGTACAACTCAT 57.151 33.333 0.00 6.64 37.73 2.90
2397 7948 6.778069 ACCTGCTCATTGCTATCTACTAGTTA 59.222 38.462 0.00 0.00 43.37 2.24
2398 7949 5.600484 ACCTGCTCATTGCTATCTACTAGTT 59.400 40.000 0.00 0.00 43.37 2.24
2450 8009 1.535028 CAAAGAGCATGGCGTTGTACA 59.465 47.619 0.00 0.00 0.00 2.90
2467 8026 7.888021 ACAACTGACCATCCATCTTTATACAAA 59.112 33.333 0.00 0.00 0.00 2.83
2472 8031 6.721208 ACAAACAACTGACCATCCATCTTTAT 59.279 34.615 0.00 0.00 0.00 1.40
2492 8051 3.246619 TCACCGCAACAAAAAGACAAAC 58.753 40.909 0.00 0.00 0.00 2.93
2558 8130 2.124122 GGTGTTGTTCGAAATGCCAAC 58.876 47.619 17.73 17.73 38.10 3.77
2584 8156 6.892658 TTACAAGGTTGCATGTTTGTCTAT 57.107 33.333 11.88 0.00 35.55 1.98
2609 8182 8.736244 GTCCTTAATTTTAGGTCTTTACATGCA 58.264 33.333 1.63 0.00 34.29 3.96
2613 8186 9.720769 CAGAGTCCTTAATTTTAGGTCTTTACA 57.279 33.333 3.35 0.00 32.43 2.41
2638 8236 5.938710 ACGATTCCTAGAGCTCGATATAACA 59.061 40.000 8.37 0.00 35.24 2.41
2644 9476 1.268352 GCACGATTCCTAGAGCTCGAT 59.732 52.381 8.37 0.00 35.24 3.59
2673 9505 4.280677 CCTTGATTCCTTGTAGCAAAACCA 59.719 41.667 0.00 0.00 0.00 3.67
2709 9541 3.923864 TGGGTTCAGCTCACGCGT 61.924 61.111 5.58 5.58 42.32 6.01
2736 9568 3.435566 GTCGAATCGTGAGCTGTTATCA 58.564 45.455 1.52 0.00 0.00 2.15
2738 9570 2.159421 ACGTCGAATCGTGAGCTGTTAT 60.159 45.455 1.52 0.00 42.56 1.89
2746 9578 1.435577 TCTGAGACGTCGAATCGTGA 58.564 50.000 10.46 2.74 44.21 4.35
2755 9587 1.010574 CTCGCCGATCTGAGACGTC 60.011 63.158 7.70 7.70 34.04 4.34
2758 9590 2.026879 GCCTCGCCGATCTGAGAC 59.973 66.667 7.75 0.00 34.04 3.36
2762 9594 2.587194 CCTTGCCTCGCCGATCTG 60.587 66.667 0.00 0.00 0.00 2.90
2776 9608 2.042435 CTCCTCCTCCTCCGCCTT 60.042 66.667 0.00 0.00 0.00 4.35
2782 9614 4.200283 CACGCGCTCCTCCTCCTC 62.200 72.222 5.73 0.00 0.00 3.71
2798 9630 2.689658 TGAGAAGAGAAGTGGTTCCCA 58.310 47.619 0.00 0.00 32.48 4.37
2821 9653 2.173356 TCTCTTCCACATGCTATTGGGG 59.827 50.000 0.00 0.00 41.90 4.96
2822 9654 3.565764 TCTCTTCCACATGCTATTGGG 57.434 47.619 0.00 0.00 33.25 4.12
2823 9655 4.518211 GGATTCTCTTCCACATGCTATTGG 59.482 45.833 0.00 0.00 35.72 3.16
2871 9711 2.291209 CCCATGTGGCTTATATGGCA 57.709 50.000 10.41 10.41 44.35 4.92
2882 9722 1.143813 ATCTCTAAGGGCCCATGTGG 58.856 55.000 27.56 11.04 37.09 4.17
2883 9723 3.303351 AAATCTCTAAGGGCCCATGTG 57.697 47.619 27.56 13.94 0.00 3.21
2927 9767 7.122650 CACTGTTGAAATATTATGGTGGGTCTT 59.877 37.037 0.00 0.00 0.00 3.01
2930 9770 5.656416 CCACTGTTGAAATATTATGGTGGGT 59.344 40.000 0.00 0.00 38.29 4.51
3010 9905 1.341482 TGGTCCAAACTGGCTGAAACA 60.341 47.619 0.00 0.00 37.47 2.83
3020 9915 1.166531 GCAACTCGCTGGTCCAAACT 61.167 55.000 0.00 0.00 37.77 2.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.