Multiple sequence alignment - TraesCS1D01G447300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G447300 chr1D 100.000 4390 0 0 1 4390 490096460 490092071 0.000000e+00 8107.0
1 TraesCS1D01G447300 chr1D 81.175 664 113 5 2099 2757 445001829 445002485 1.400000e-144 523.0
2 TraesCS1D01G447300 chr1D 81.752 685 56 33 522 1170 489092598 489091947 3.920000e-140 508.0
3 TraesCS1D01G447300 chr1D 81.098 656 99 12 2109 2759 92094487 92093852 6.550000e-138 501.0
4 TraesCS1D01G447300 chr1D 87.707 423 31 18 2844 3248 489091883 489091464 1.430000e-129 473.0
5 TraesCS1D01G447300 chr1D 79.032 434 72 16 1 422 235581788 235582214 3.340000e-71 279.0
6 TraesCS1D01G447300 chr1D 95.833 96 2 2 4295 4390 489090089 489089996 2.110000e-33 154.0
7 TraesCS1D01G447300 chr1D 87.156 109 14 0 1952 2060 384467853 384467961 1.660000e-24 124.0
8 TraesCS1D01G447300 chr1D 84.091 88 8 3 1958 2039 454907763 454907676 3.640000e-11 80.5
9 TraesCS1D01G447300 chr1D 94.872 39 2 0 4168 4206 489090151 489090113 1.320000e-05 62.1
10 TraesCS1D01G447300 chr1B 93.219 1342 59 10 2825 4159 680934461 680933145 0.000000e+00 1945.0
11 TraesCS1D01G447300 chr1B 80.624 449 67 9 97 529 638885487 638885931 3.270000e-86 329.0
12 TraesCS1D01G447300 chr1B 75.033 757 161 21 1189 1924 361510860 361510111 4.230000e-85 326.0
13 TraesCS1D01G447300 chr1B 84.091 308 34 11 899 1199 680934757 680934458 2.580000e-72 283.0
14 TraesCS1D01G447300 chr1B 78.899 436 75 10 1 422 543078569 543079001 3.340000e-71 279.0
15 TraesCS1D01G447300 chr1A 93.068 880 43 6 3519 4390 588099096 588099965 0.000000e+00 1271.0
16 TraesCS1D01G447300 chr1A 93.429 700 33 7 3701 4390 588129377 588130073 0.000000e+00 1026.0
17 TraesCS1D01G447300 chr1A 83.122 1185 138 29 2099 3250 588097536 588098691 0.000000e+00 1024.0
18 TraesCS1D01G447300 chr1A 88.400 500 47 7 1 489 588022495 588022994 3.780000e-165 592.0
19 TraesCS1D01G447300 chr1A 93.842 341 15 3 2825 3160 588129040 588129379 3.920000e-140 508.0
20 TraesCS1D01G447300 chr1A 86.512 430 33 18 2844 3248 540888286 540887857 2.410000e-122 449.0
21 TraesCS1D01G447300 chr1A 90.244 287 18 5 527 812 588096306 588096583 2.490000e-97 366.0
22 TraesCS1D01G447300 chr1A 79.032 558 61 27 3489 4025 540887629 540887107 9.100000e-87 331.0
23 TraesCS1D01G447300 chr1A 79.572 514 58 11 879 1385 588096680 588097153 1.520000e-84 324.0
24 TraesCS1D01G447300 chr1A 85.666 293 28 11 913 1199 588128759 588129043 3.320000e-76 296.0
25 TraesCS1D01G447300 chr1A 94.681 188 10 0 3301 3488 588098694 588098881 4.290000e-75 292.0
26 TraesCS1D01G447300 chr1A 89.121 239 14 6 938 1170 540888582 540888350 2.000000e-73 287.0
27 TraesCS1D01G447300 chr1A 80.319 188 36 1 332 519 579161706 579161520 1.650000e-29 141.0
28 TraesCS1D01G447300 chr1A 95.556 45 2 0 799 843 588096637 588096681 6.090000e-09 73.1
29 TraesCS1D01G447300 chr1A 100.000 34 0 0 3487 3520 588098959 588098992 3.670000e-06 63.9
30 TraesCS1D01G447300 chr7D 82.466 730 109 11 2099 2819 477656563 477657282 4.820000e-174 621.0
31 TraesCS1D01G447300 chr7D 76.585 615 118 18 1197 1793 453089780 453089174 9.170000e-82 315.0
32 TraesCS1D01G447300 chr7D 80.587 443 57 15 1 418 549939881 549940319 9.170000e-82 315.0
33 TraesCS1D01G447300 chr7D 81.848 303 51 2 1 300 550047772 550048073 7.290000e-63 252.0
34 TraesCS1D01G447300 chr2D 81.619 729 117 9 2099 2819 95181934 95182653 4.890000e-164 588.0
35 TraesCS1D01G447300 chr2D 80.533 750 125 14 1199 1930 632299437 632298691 1.380000e-154 556.0
36 TraesCS1D01G447300 chr2D 80.828 652 108 11 1280 1914 373876003 373875352 3.050000e-136 496.0
37 TraesCS1D01G447300 chr2D 83.133 415 61 9 1521 1930 523744337 523743927 1.930000e-98 370.0
38 TraesCS1D01G447300 chr2D 74.847 652 119 30 2127 2771 557210945 557210332 2.030000e-63 254.0
39 TraesCS1D01G447300 chr2D 77.751 418 84 7 1197 1606 215848445 215848861 9.430000e-62 248.0
40 TraesCS1D01G447300 chr3D 81.543 726 120 9 2099 2819 135049771 135049055 1.760000e-163 586.0
41 TraesCS1D01G447300 chr3D 80.511 744 118 17 1200 1930 92211293 92210564 2.990000e-151 545.0
42 TraesCS1D01G447300 chr3D 81.716 536 69 16 1 515 68429553 68430080 1.890000e-113 420.0
43 TraesCS1D01G447300 chr3D 80.342 468 74 13 1197 1651 170076538 170077000 5.440000e-89 339.0
44 TraesCS1D01G447300 chr3D 76.718 451 69 24 100 519 320756844 320756399 7.390000e-53 219.0
45 TraesCS1D01G447300 chr5D 82.589 672 95 15 2057 2714 37646196 37645533 1.370000e-159 573.0
46 TraesCS1D01G447300 chr5D 83.442 616 81 16 2099 2706 443310839 443311441 1.780000e-153 553.0
47 TraesCS1D01G447300 chr5D 83.450 429 59 5 1 418 435583371 435582944 5.320000e-104 388.0
48 TraesCS1D01G447300 chr5D 80.340 529 85 9 6 519 34244565 34244041 2.480000e-102 383.0
49 TraesCS1D01G447300 chr6B 81.013 711 117 14 1236 1931 659578828 659578121 2.310000e-152 549.0
50 TraesCS1D01G447300 chr2A 81.066 713 108 17 2070 2767 659231287 659230587 1.070000e-150 544.0
51 TraesCS1D01G447300 chr2A 79.762 168 31 2 353 517 382325987 382326154 7.710000e-23 119.0
52 TraesCS1D01G447300 chr4A 79.670 728 128 10 2099 2819 742465195 742465909 1.410000e-139 507.0
53 TraesCS1D01G447300 chr4A 78.483 725 130 22 2106 2819 109863003 109862294 6.700000e-123 451.0
54 TraesCS1D01G447300 chr4A 79.058 191 25 8 2062 2238 539317375 539317186 2.770000e-22 117.0
55 TraesCS1D01G447300 chr3B 77.426 917 156 29 1199 2069 721201271 721200360 2.360000e-137 499.0
56 TraesCS1D01G447300 chr3B 79.745 548 80 16 1 522 187338250 187338792 6.940000e-98 368.0
57 TraesCS1D01G447300 chr3B 76.545 631 118 24 1323 1930 687585108 687584485 7.090000e-83 318.0
58 TraesCS1D01G447300 chr3B 85.217 115 11 3 1953 2061 81479673 81479787 3.590000e-21 113.0
59 TraesCS1D01G447300 chr3B 77.841 176 31 7 348 519 101828297 101828126 7.770000e-18 102.0
60 TraesCS1D01G447300 chr3B 82.759 116 19 1 1944 2059 704877428 704877542 7.770000e-18 102.0
61 TraesCS1D01G447300 chr3A 80.259 618 105 12 1270 1883 81702185 81702789 2.410000e-122 449.0
62 TraesCS1D01G447300 chr5B 77.556 753 144 20 1195 1930 122140788 122141532 8.720000e-117 431.0
63 TraesCS1D01G447300 chr5B 78.704 324 62 7 1214 1533 58399669 58399989 4.450000e-50 209.0
64 TraesCS1D01G447300 chr5B 77.429 350 52 22 1 330 661017 660675 2.700000e-42 183.0
65 TraesCS1D01G447300 chr7A 82.898 421 67 3 4 421 136537382 136536964 1.490000e-99 374.0
66 TraesCS1D01G447300 chr7A 83.333 114 12 4 1944 2051 493091524 493091412 1.000000e-16 99.0
67 TraesCS1D01G447300 chr6A 80.998 421 59 13 2 406 467772773 467773188 9.170000e-82 315.0
68 TraesCS1D01G447300 chr6A 81.197 117 16 1 1952 2062 23901704 23901820 6.050000e-14 89.8
69 TraesCS1D01G447300 chr7B 75.645 698 133 27 1253 1930 684031386 684030706 3.300000e-81 313.0
70 TraesCS1D01G447300 chr7B 81.890 127 14 6 1944 2063 577672770 577672894 1.000000e-16 99.0
71 TraesCS1D01G447300 chr6D 80.000 445 64 10 1 422 328831839 328832281 5.520000e-79 305.0
72 TraesCS1D01G447300 chr5A 81.443 194 25 9 1197 1384 518400236 518400048 9.840000e-32 148.0
73 TraesCS1D01G447300 chr5A 84.685 111 11 4 1958 2062 534828310 534828200 6.000000e-19 106.0
74 TraesCS1D01G447300 chr5A 100.000 36 0 0 2058 2093 693400694 693400659 2.830000e-07 67.6
75 TraesCS1D01G447300 chr4B 79.188 197 39 2 1199 1394 67057538 67057343 7.660000e-28 135.0
76 TraesCS1D01G447300 chrUn 76.842 190 38 6 337 523 404223239 404223425 7.770000e-18 102.0
77 TraesCS1D01G447300 chr2B 76.842 190 38 6 337 523 147508019 147507833 7.770000e-18 102.0
78 TraesCS1D01G447300 chr2B 82.828 99 9 6 1948 2039 300433860 300433957 1.010000e-11 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G447300 chr1D 490092071 490096460 4389 True 8107.000000 8107 100.000000 1 4390 1 chr1D.!!$R3 4389
1 TraesCS1D01G447300 chr1D 445001829 445002485 656 False 523.000000 523 81.175000 2099 2757 1 chr1D.!!$F3 658
2 TraesCS1D01G447300 chr1D 92093852 92094487 635 True 501.000000 501 81.098000 2109 2759 1 chr1D.!!$R1 650
3 TraesCS1D01G447300 chr1D 489089996 489092598 2602 True 299.275000 508 90.041000 522 4390 4 chr1D.!!$R4 3868
4 TraesCS1D01G447300 chr1B 680933145 680934757 1612 True 1114.000000 1945 88.655000 899 4159 2 chr1B.!!$R2 3260
5 TraesCS1D01G447300 chr1B 361510111 361510860 749 True 326.000000 326 75.033000 1189 1924 1 chr1B.!!$R1 735
6 TraesCS1D01G447300 chr1A 588128759 588130073 1314 False 610.000000 1026 90.979000 913 4390 3 chr1A.!!$F3 3477
7 TraesCS1D01G447300 chr1A 588096306 588099965 3659 False 487.714286 1271 90.891857 527 4390 7 chr1A.!!$F2 3863
8 TraesCS1D01G447300 chr1A 540887107 540888582 1475 True 355.666667 449 84.888333 938 4025 3 chr1A.!!$R2 3087
9 TraesCS1D01G447300 chr7D 477656563 477657282 719 False 621.000000 621 82.466000 2099 2819 1 chr7D.!!$F1 720
10 TraesCS1D01G447300 chr7D 453089174 453089780 606 True 315.000000 315 76.585000 1197 1793 1 chr7D.!!$R1 596
11 TraesCS1D01G447300 chr2D 95181934 95182653 719 False 588.000000 588 81.619000 2099 2819 1 chr2D.!!$F1 720
12 TraesCS1D01G447300 chr2D 632298691 632299437 746 True 556.000000 556 80.533000 1199 1930 1 chr2D.!!$R4 731
13 TraesCS1D01G447300 chr2D 373875352 373876003 651 True 496.000000 496 80.828000 1280 1914 1 chr2D.!!$R1 634
14 TraesCS1D01G447300 chr2D 557210332 557210945 613 True 254.000000 254 74.847000 2127 2771 1 chr2D.!!$R3 644
15 TraesCS1D01G447300 chr3D 135049055 135049771 716 True 586.000000 586 81.543000 2099 2819 1 chr3D.!!$R2 720
16 TraesCS1D01G447300 chr3D 92210564 92211293 729 True 545.000000 545 80.511000 1200 1930 1 chr3D.!!$R1 730
17 TraesCS1D01G447300 chr3D 68429553 68430080 527 False 420.000000 420 81.716000 1 515 1 chr3D.!!$F1 514
18 TraesCS1D01G447300 chr5D 37645533 37646196 663 True 573.000000 573 82.589000 2057 2714 1 chr5D.!!$R2 657
19 TraesCS1D01G447300 chr5D 443310839 443311441 602 False 553.000000 553 83.442000 2099 2706 1 chr5D.!!$F1 607
20 TraesCS1D01G447300 chr5D 34244041 34244565 524 True 383.000000 383 80.340000 6 519 1 chr5D.!!$R1 513
21 TraesCS1D01G447300 chr6B 659578121 659578828 707 True 549.000000 549 81.013000 1236 1931 1 chr6B.!!$R1 695
22 TraesCS1D01G447300 chr2A 659230587 659231287 700 True 544.000000 544 81.066000 2070 2767 1 chr2A.!!$R1 697
23 TraesCS1D01G447300 chr4A 742465195 742465909 714 False 507.000000 507 79.670000 2099 2819 1 chr4A.!!$F1 720
24 TraesCS1D01G447300 chr4A 109862294 109863003 709 True 451.000000 451 78.483000 2106 2819 1 chr4A.!!$R1 713
25 TraesCS1D01G447300 chr3B 721200360 721201271 911 True 499.000000 499 77.426000 1199 2069 1 chr3B.!!$R3 870
26 TraesCS1D01G447300 chr3B 187338250 187338792 542 False 368.000000 368 79.745000 1 522 1 chr3B.!!$F2 521
27 TraesCS1D01G447300 chr3B 687584485 687585108 623 True 318.000000 318 76.545000 1323 1930 1 chr3B.!!$R2 607
28 TraesCS1D01G447300 chr3A 81702185 81702789 604 False 449.000000 449 80.259000 1270 1883 1 chr3A.!!$F1 613
29 TraesCS1D01G447300 chr5B 122140788 122141532 744 False 431.000000 431 77.556000 1195 1930 1 chr5B.!!$F2 735
30 TraesCS1D01G447300 chr7B 684030706 684031386 680 True 313.000000 313 75.645000 1253 1930 1 chr7B.!!$R1 677

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
399 408 0.036022 GAGCTGGATATGAGGGGTGC 59.964 60.0 0.0 0.0 0.00 5.01 F
963 1080 0.038343 GCCGCACCAACAATCACAAT 60.038 50.0 0.0 0.0 0.00 2.71 F
1585 1751 0.107410 GTGATGGAACGGCCCACATA 60.107 55.0 0.0 0.0 39.34 2.29 F
3264 3630 0.031178 GGGCATTAGCAAATCCGCTG 59.969 55.0 0.0 0.0 43.68 5.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1567 1729 0.180171 CTATGTGGGCCGTTCCATCA 59.820 55.000 0.00 0.0 39.26 3.07 R
2788 3103 0.034337 GCAGACCCGTAAACCTCACA 59.966 55.000 0.00 0.0 0.00 3.58 R
3273 3639 0.386352 TTGTCGGCTAACTCACGTCG 60.386 55.000 0.00 0.0 0.00 5.12 R
4170 5308 2.107366 TCTGGGATCATACAGAACGCA 58.893 47.619 10.44 0.0 40.51 5.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 1.047002 CGGATCTCCTGCAGGATCTT 58.953 55.000 35.11 22.01 44.46 2.40
40 41 3.582208 GGATCTCCTGCAGGATCTTGTAT 59.418 47.826 35.11 20.05 44.46 2.29
68 69 1.650912 GGCATGAGCATTGCGTAGG 59.349 57.895 2.38 0.00 44.61 3.18
70 71 0.305922 GCATGAGCATTGCGTAGGAC 59.694 55.000 2.38 0.00 41.58 3.85
130 139 3.670629 CTGAGCGGGAGAGGGAGGT 62.671 68.421 0.00 0.00 0.00 3.85
133 142 4.779733 GCGGGAGAGGGAGGTGGA 62.780 72.222 0.00 0.00 0.00 4.02
134 143 2.283809 CGGGAGAGGGAGGTGGAT 59.716 66.667 0.00 0.00 0.00 3.41
135 144 2.136878 CGGGAGAGGGAGGTGGATG 61.137 68.421 0.00 0.00 0.00 3.51
136 145 1.768077 GGGAGAGGGAGGTGGATGG 60.768 68.421 0.00 0.00 0.00 3.51
137 146 1.314867 GGAGAGGGAGGTGGATGGA 59.685 63.158 0.00 0.00 0.00 3.41
138 147 1.051556 GGAGAGGGAGGTGGATGGAC 61.052 65.000 0.00 0.00 0.00 4.02
139 148 1.381872 AGAGGGAGGTGGATGGACG 60.382 63.158 0.00 0.00 0.00 4.79
140 149 1.686110 GAGGGAGGTGGATGGACGT 60.686 63.158 0.00 0.00 0.00 4.34
141 150 1.961180 GAGGGAGGTGGATGGACGTG 61.961 65.000 0.00 0.00 0.00 4.49
142 151 2.125106 GGAGGTGGATGGACGTGC 60.125 66.667 0.00 0.00 0.00 5.34
143 152 2.662596 GAGGTGGATGGACGTGCA 59.337 61.111 13.59 13.59 0.00 4.57
144 153 1.741770 GAGGTGGATGGACGTGCAC 60.742 63.158 13.47 6.82 39.41 4.57
145 154 2.172483 GAGGTGGATGGACGTGCACT 62.172 60.000 13.47 4.04 39.95 4.40
146 155 2.034879 GGTGGATGGACGTGCACTG 61.035 63.158 13.47 11.05 39.95 3.66
147 156 2.034879 GTGGATGGACGTGCACTGG 61.035 63.158 13.47 2.33 37.45 4.00
148 157 3.127533 GGATGGACGTGCACTGGC 61.128 66.667 13.47 10.62 41.68 4.85
149 158 3.490759 GATGGACGTGCACTGGCG 61.491 66.667 13.47 3.81 45.35 5.69
159 168 3.114616 CACTGGCGGCGTGAAGAG 61.115 66.667 22.65 8.84 34.35 2.85
160 169 4.379243 ACTGGCGGCGTGAAGAGG 62.379 66.667 9.37 0.00 0.00 3.69
165 174 3.702048 CGGCGTGAAGAGGGGGAA 61.702 66.667 0.00 0.00 0.00 3.97
166 175 2.269241 GGCGTGAAGAGGGGGAAG 59.731 66.667 0.00 0.00 0.00 3.46
167 176 2.269241 GCGTGAAGAGGGGGAAGG 59.731 66.667 0.00 0.00 0.00 3.46
168 177 2.593956 GCGTGAAGAGGGGGAAGGT 61.594 63.158 0.00 0.00 0.00 3.50
169 178 1.296715 CGTGAAGAGGGGGAAGGTG 59.703 63.158 0.00 0.00 0.00 4.00
170 179 1.685820 GTGAAGAGGGGGAAGGTGG 59.314 63.158 0.00 0.00 0.00 4.61
171 180 0.840722 GTGAAGAGGGGGAAGGTGGA 60.841 60.000 0.00 0.00 0.00 4.02
172 181 0.121197 TGAAGAGGGGGAAGGTGGAT 59.879 55.000 0.00 0.00 0.00 3.41
173 182 0.548510 GAAGAGGGGGAAGGTGGATG 59.451 60.000 0.00 0.00 0.00 3.51
174 183 0.921256 AAGAGGGGGAAGGTGGATGG 60.921 60.000 0.00 0.00 0.00 3.51
175 184 2.287194 AGGGGGAAGGTGGATGGG 60.287 66.667 0.00 0.00 0.00 4.00
176 185 4.143301 GGGGGAAGGTGGATGGGC 62.143 72.222 0.00 0.00 0.00 5.36
177 186 3.023735 GGGGAAGGTGGATGGGCT 61.024 66.667 0.00 0.00 0.00 5.19
178 187 1.696314 GGGGAAGGTGGATGGGCTA 60.696 63.158 0.00 0.00 0.00 3.93
179 188 1.709994 GGGGAAGGTGGATGGGCTAG 61.710 65.000 0.00 0.00 0.00 3.42
180 189 1.709994 GGGAAGGTGGATGGGCTAGG 61.710 65.000 0.00 0.00 0.00 3.02
181 190 1.709994 GGAAGGTGGATGGGCTAGGG 61.710 65.000 0.00 0.00 0.00 3.53
182 191 0.988678 GAAGGTGGATGGGCTAGGGT 60.989 60.000 0.00 0.00 0.00 4.34
183 192 0.552615 AAGGTGGATGGGCTAGGGTT 60.553 55.000 0.00 0.00 0.00 4.11
184 193 1.227383 GGTGGATGGGCTAGGGTTG 59.773 63.158 0.00 0.00 0.00 3.77
185 194 1.453928 GTGGATGGGCTAGGGTTGC 60.454 63.158 0.00 0.00 0.00 4.17
186 195 2.203209 GGATGGGCTAGGGTTGCG 60.203 66.667 0.00 0.00 0.00 4.85
187 196 2.203209 GATGGGCTAGGGTTGCGG 60.203 66.667 0.00 0.00 0.00 5.69
188 197 3.774599 GATGGGCTAGGGTTGCGGG 62.775 68.421 0.00 0.00 0.00 6.13
190 199 4.484872 GGGCTAGGGTTGCGGGAC 62.485 72.222 0.00 0.00 0.00 4.46
204 213 3.446507 GGGACGCCGTCAGATTTAA 57.553 52.632 20.08 0.00 33.68 1.52
205 214 1.729284 GGGACGCCGTCAGATTTAAA 58.271 50.000 20.08 0.00 33.68 1.52
206 215 2.285977 GGGACGCCGTCAGATTTAAAT 58.714 47.619 20.08 0.00 33.68 1.40
207 216 3.460103 GGGACGCCGTCAGATTTAAATA 58.540 45.455 20.08 0.00 33.68 1.40
208 217 3.493503 GGGACGCCGTCAGATTTAAATAG 59.506 47.826 20.08 0.00 33.68 1.73
209 218 3.493503 GGACGCCGTCAGATTTAAATAGG 59.506 47.826 20.08 1.88 33.68 2.57
210 219 2.870411 ACGCCGTCAGATTTAAATAGGC 59.130 45.455 15.34 15.34 39.89 3.93
211 220 3.521524 GCCGTCAGATTTAAATAGGCG 57.478 47.619 16.05 16.05 33.66 5.52
212 221 2.223377 GCCGTCAGATTTAAATAGGCGG 59.777 50.000 28.34 28.34 39.63 6.13
213 222 3.724374 CCGTCAGATTTAAATAGGCGGA 58.276 45.455 28.59 10.80 39.05 5.54
214 223 4.315803 CCGTCAGATTTAAATAGGCGGAT 58.684 43.478 28.59 0.00 39.05 4.18
215 224 4.755123 CCGTCAGATTTAAATAGGCGGATT 59.245 41.667 28.59 0.00 39.05 3.01
216 225 5.238650 CCGTCAGATTTAAATAGGCGGATTT 59.761 40.000 28.59 5.85 39.05 2.17
217 226 6.136071 CGTCAGATTTAAATAGGCGGATTTG 58.864 40.000 15.49 0.00 31.51 2.32
218 227 6.438763 GTCAGATTTAAATAGGCGGATTTGG 58.561 40.000 0.00 0.00 31.51 3.28
219 228 6.039382 GTCAGATTTAAATAGGCGGATTTGGT 59.961 38.462 0.00 0.00 31.51 3.67
220 229 6.262273 TCAGATTTAAATAGGCGGATTTGGTC 59.738 38.462 0.00 6.07 31.51 4.02
221 230 6.263168 CAGATTTAAATAGGCGGATTTGGTCT 59.737 38.462 0.00 7.64 31.51 3.85
222 231 6.486993 AGATTTAAATAGGCGGATTTGGTCTC 59.513 38.462 0.00 3.60 31.51 3.36
223 232 2.240493 AATAGGCGGATTTGGTCTCG 57.760 50.000 0.00 0.00 0.00 4.04
224 233 0.393077 ATAGGCGGATTTGGTCTCGG 59.607 55.000 0.00 0.00 0.00 4.63
225 234 1.682451 TAGGCGGATTTGGTCTCGGG 61.682 60.000 0.00 0.00 0.00 5.14
226 235 3.202706 GCGGATTTGGTCTCGGGC 61.203 66.667 0.00 0.00 0.00 6.13
227 236 2.267642 CGGATTTGGTCTCGGGCA 59.732 61.111 0.00 0.00 0.00 5.36
228 237 1.815421 CGGATTTGGTCTCGGGCAG 60.815 63.158 0.00 0.00 0.00 4.85
229 238 2.115291 GGATTTGGTCTCGGGCAGC 61.115 63.158 0.00 0.00 0.00 5.25
230 239 2.436646 ATTTGGTCTCGGGCAGCG 60.437 61.111 0.00 0.00 0.00 5.18
231 240 2.852495 GATTTGGTCTCGGGCAGCGA 62.852 60.000 0.00 0.00 0.00 4.93
232 241 2.859273 ATTTGGTCTCGGGCAGCGAG 62.859 60.000 6.81 6.81 35.05 5.03
247 256 4.874977 GAGCTGGACCGGCGCTAC 62.875 72.222 20.72 9.85 41.21 3.58
260 269 2.851104 GCTACACGGCGTTCACAC 59.149 61.111 11.19 0.00 0.00 3.82
261 270 2.664436 GCTACACGGCGTTCACACC 61.664 63.158 11.19 0.00 0.00 4.16
278 287 4.208686 CGCAGGTACGGAGGAGGC 62.209 72.222 0.00 0.00 0.00 4.70
279 288 3.075005 GCAGGTACGGAGGAGGCA 61.075 66.667 0.00 0.00 0.00 4.75
280 289 2.435693 GCAGGTACGGAGGAGGCAT 61.436 63.158 0.00 0.00 0.00 4.40
281 290 1.742768 CAGGTACGGAGGAGGCATC 59.257 63.158 0.00 0.00 0.00 3.91
290 299 2.427753 GGAGGCATCCATCGGACC 59.572 66.667 13.69 0.00 45.87 4.46
291 300 2.029666 GAGGCATCCATCGGACCG 59.970 66.667 7.84 7.84 32.98 4.79
292 301 2.764128 AGGCATCCATCGGACCGT 60.764 61.111 14.79 0.00 32.98 4.83
293 302 2.280186 GGCATCCATCGGACCGTC 60.280 66.667 14.79 0.00 32.98 4.79
294 303 2.658593 GCATCCATCGGACCGTCG 60.659 66.667 14.79 6.05 32.98 5.12
295 304 2.027605 CATCCATCGGACCGTCGG 59.972 66.667 14.79 10.48 32.98 4.79
296 305 3.224324 ATCCATCGGACCGTCGGG 61.224 66.667 17.28 13.63 32.98 5.14
311 320 4.772687 GGGTTTCCGGGCGAGTCC 62.773 72.222 0.00 0.00 0.00 3.85
326 335 3.407967 TCCGCATGGGACCCCTTC 61.408 66.667 12.02 0.00 40.94 3.46
327 336 4.856801 CCGCATGGGACCCCTTCG 62.857 72.222 12.02 4.22 38.47 3.79
328 337 4.096003 CGCATGGGACCCCTTCGT 62.096 66.667 8.45 0.00 36.94 3.85
329 338 2.124695 GCATGGGACCCCTTCGTC 60.125 66.667 8.45 0.00 36.94 4.20
330 339 2.670148 GCATGGGACCCCTTCGTCT 61.670 63.158 8.45 0.00 36.94 4.18
331 340 1.221840 CATGGGACCCCTTCGTCTG 59.778 63.158 8.45 0.00 36.94 3.51
332 341 1.229529 ATGGGACCCCTTCGTCTGT 60.230 57.895 8.45 0.00 36.94 3.41
333 342 1.265454 ATGGGACCCCTTCGTCTGTC 61.265 60.000 8.45 0.00 36.94 3.51
334 343 2.657066 GGGACCCCTTCGTCTGTCC 61.657 68.421 0.00 0.00 45.25 4.02
335 344 1.609794 GGACCCCTTCGTCTGTCCT 60.610 63.158 0.00 0.00 43.16 3.85
336 345 0.324091 GGACCCCTTCGTCTGTCCTA 60.324 60.000 0.00 0.00 43.16 2.94
337 346 0.816373 GACCCCTTCGTCTGTCCTAC 59.184 60.000 0.00 0.00 0.00 3.18
338 347 0.964358 ACCCCTTCGTCTGTCCTACG 60.964 60.000 0.00 0.00 41.64 3.51
339 348 0.964358 CCCCTTCGTCTGTCCTACGT 60.964 60.000 0.00 0.00 41.08 3.57
340 349 0.170561 CCCTTCGTCTGTCCTACGTG 59.829 60.000 0.00 0.00 41.08 4.49
341 350 0.456312 CCTTCGTCTGTCCTACGTGC 60.456 60.000 0.00 0.00 41.08 5.34
342 351 0.456312 CTTCGTCTGTCCTACGTGCC 60.456 60.000 0.00 0.00 41.08 5.01
343 352 2.191354 TTCGTCTGTCCTACGTGCCG 62.191 60.000 0.00 0.00 41.08 5.69
344 353 2.181021 GTCTGTCCTACGTGCCGG 59.819 66.667 0.00 0.00 0.00 6.13
345 354 3.066190 TCTGTCCTACGTGCCGGG 61.066 66.667 2.18 0.00 0.00 5.73
346 355 4.814294 CTGTCCTACGTGCCGGGC 62.814 72.222 13.32 13.32 0.00 6.13
367 376 4.016706 CCCGGACGCCCCCATATC 62.017 72.222 0.73 0.00 0.00 1.63
368 377 4.016706 CCGGACGCCCCCATATCC 62.017 72.222 0.00 0.00 0.00 2.59
370 379 4.699522 GGACGCCCCCATATCCGC 62.700 72.222 0.00 0.00 0.00 5.54
371 380 4.699522 GACGCCCCCATATCCGCC 62.700 72.222 0.00 0.00 0.00 6.13
375 384 2.941025 CCCCCATATCCGCCCCAT 60.941 66.667 0.00 0.00 0.00 4.00
376 385 1.618143 CCCCCATATCCGCCCCATA 60.618 63.158 0.00 0.00 0.00 2.74
377 386 0.993509 CCCCCATATCCGCCCCATAT 60.994 60.000 0.00 0.00 0.00 1.78
378 387 0.926293 CCCCATATCCGCCCCATATT 59.074 55.000 0.00 0.00 0.00 1.28
379 388 1.287739 CCCCATATCCGCCCCATATTT 59.712 52.381 0.00 0.00 0.00 1.40
380 389 2.378038 CCCATATCCGCCCCATATTTG 58.622 52.381 0.00 0.00 0.00 2.32
381 390 2.025416 CCCATATCCGCCCCATATTTGA 60.025 50.000 0.00 0.00 0.00 2.69
382 391 3.282021 CCATATCCGCCCCATATTTGAG 58.718 50.000 0.00 0.00 0.00 3.02
383 392 2.489938 TATCCGCCCCATATTTGAGC 57.510 50.000 0.00 0.00 0.00 4.26
384 393 0.773644 ATCCGCCCCATATTTGAGCT 59.226 50.000 0.00 0.00 0.00 4.09
385 394 0.179020 TCCGCCCCATATTTGAGCTG 60.179 55.000 0.00 0.00 0.00 4.24
386 395 1.174712 CCGCCCCATATTTGAGCTGG 61.175 60.000 0.00 0.00 0.00 4.85
387 396 0.179020 CGCCCCATATTTGAGCTGGA 60.179 55.000 0.00 0.00 31.38 3.86
388 397 1.546323 CGCCCCATATTTGAGCTGGAT 60.546 52.381 0.00 0.00 31.38 3.41
389 398 2.290260 CGCCCCATATTTGAGCTGGATA 60.290 50.000 0.00 0.00 31.38 2.59
390 399 3.623203 CGCCCCATATTTGAGCTGGATAT 60.623 47.826 0.00 0.00 31.38 1.63
391 400 3.698040 GCCCCATATTTGAGCTGGATATG 59.302 47.826 0.00 2.26 34.86 1.78
392 401 4.568380 GCCCCATATTTGAGCTGGATATGA 60.568 45.833 16.46 0.00 36.37 2.15
393 402 5.191426 CCCCATATTTGAGCTGGATATGAG 58.809 45.833 16.46 7.94 36.37 2.90
394 403 5.191426 CCCATATTTGAGCTGGATATGAGG 58.809 45.833 16.46 13.12 36.37 3.86
395 404 5.191426 CCATATTTGAGCTGGATATGAGGG 58.809 45.833 16.46 3.28 36.37 4.30
396 405 3.803186 ATTTGAGCTGGATATGAGGGG 57.197 47.619 0.00 0.00 0.00 4.79
397 406 2.196742 TTGAGCTGGATATGAGGGGT 57.803 50.000 0.00 0.00 0.00 4.95
398 407 1.427809 TGAGCTGGATATGAGGGGTG 58.572 55.000 0.00 0.00 0.00 4.61
399 408 0.036022 GAGCTGGATATGAGGGGTGC 59.964 60.000 0.00 0.00 0.00 5.01
400 409 1.073897 GCTGGATATGAGGGGTGCC 59.926 63.158 0.00 0.00 0.00 5.01
401 410 1.372683 CTGGATATGAGGGGTGCCG 59.627 63.158 0.00 0.00 0.00 5.69
402 411 1.074850 TGGATATGAGGGGTGCCGA 60.075 57.895 0.00 0.00 0.00 5.54
403 412 0.473694 TGGATATGAGGGGTGCCGAT 60.474 55.000 0.00 0.00 0.00 4.18
404 413 0.250513 GGATATGAGGGGTGCCGATC 59.749 60.000 0.00 0.00 0.00 3.69
405 414 0.976641 GATATGAGGGGTGCCGATCA 59.023 55.000 0.00 0.00 0.00 2.92
406 415 0.979665 ATATGAGGGGTGCCGATCAG 59.020 55.000 0.00 0.00 0.00 2.90
407 416 0.398522 TATGAGGGGTGCCGATCAGT 60.399 55.000 0.00 0.00 0.00 3.41
408 417 1.690219 ATGAGGGGTGCCGATCAGTC 61.690 60.000 0.00 0.00 0.00 3.51
409 418 3.083997 AGGGGTGCCGATCAGTCC 61.084 66.667 0.00 0.00 0.00 3.85
410 419 3.399181 GGGGTGCCGATCAGTCCA 61.399 66.667 0.00 0.00 0.00 4.02
411 420 2.187946 GGGTGCCGATCAGTCCAG 59.812 66.667 0.00 0.00 0.00 3.86
412 421 2.187946 GGTGCCGATCAGTCCAGG 59.812 66.667 0.00 0.00 0.00 4.45
415 424 4.148825 GCCGATCAGTCCAGGCGT 62.149 66.667 0.00 0.00 40.17 5.68
416 425 2.579201 CCGATCAGTCCAGGCGTT 59.421 61.111 0.00 0.00 0.00 4.84
417 426 1.079127 CCGATCAGTCCAGGCGTTT 60.079 57.895 0.00 0.00 0.00 3.60
418 427 0.174845 CCGATCAGTCCAGGCGTTTA 59.825 55.000 0.00 0.00 0.00 2.01
419 428 1.404986 CCGATCAGTCCAGGCGTTTAA 60.405 52.381 0.00 0.00 0.00 1.52
420 429 1.927174 CGATCAGTCCAGGCGTTTAAG 59.073 52.381 0.00 0.00 0.00 1.85
421 430 2.280628 GATCAGTCCAGGCGTTTAAGG 58.719 52.381 0.00 0.00 0.00 2.69
422 431 0.323629 TCAGTCCAGGCGTTTAAGGG 59.676 55.000 0.00 0.00 0.00 3.95
423 432 0.676782 CAGTCCAGGCGTTTAAGGGG 60.677 60.000 0.00 0.00 0.00 4.79
424 433 1.378119 GTCCAGGCGTTTAAGGGGG 60.378 63.158 0.00 0.00 0.00 5.40
425 434 2.754254 CCAGGCGTTTAAGGGGGC 60.754 66.667 0.00 0.00 0.00 5.80
426 435 2.754254 CAGGCGTTTAAGGGGGCC 60.754 66.667 0.00 0.00 45.91 5.80
428 437 2.036731 GGCGTTTAAGGGGGCCTT 59.963 61.111 0.84 0.00 46.63 4.35
429 438 2.050350 GGCGTTTAAGGGGGCCTTC 61.050 63.158 0.84 0.00 43.57 3.46
430 439 1.001269 GCGTTTAAGGGGGCCTTCT 60.001 57.895 0.84 0.00 43.57 2.85
431 440 1.313091 GCGTTTAAGGGGGCCTTCTG 61.313 60.000 0.84 0.00 43.57 3.02
432 441 0.679960 CGTTTAAGGGGGCCTTCTGG 60.680 60.000 0.84 0.00 43.57 3.86
433 442 0.324368 GTTTAAGGGGGCCTTCTGGG 60.324 60.000 0.84 0.00 43.57 4.45
434 443 0.778479 TTTAAGGGGGCCTTCTGGGT 60.778 55.000 0.84 0.00 43.57 4.51
435 444 1.212250 TTAAGGGGGCCTTCTGGGTC 61.212 60.000 0.84 0.00 43.57 4.46
438 447 3.327404 GGGGCCTTCTGGGTCGAA 61.327 66.667 0.84 0.00 41.51 3.71
439 448 2.754375 GGGCCTTCTGGGTCGAAA 59.246 61.111 0.84 0.00 41.51 3.46
440 449 1.377333 GGGCCTTCTGGGTCGAAAG 60.377 63.158 0.84 0.00 41.51 2.62
441 450 1.677552 GGCCTTCTGGGTCGAAAGA 59.322 57.895 0.00 0.00 37.43 2.52
442 451 0.253327 GGCCTTCTGGGTCGAAAGAT 59.747 55.000 0.00 0.00 45.19 2.40
443 452 1.340114 GGCCTTCTGGGTCGAAAGATT 60.340 52.381 0.00 0.00 45.19 2.40
444 453 2.093128 GGCCTTCTGGGTCGAAAGATTA 60.093 50.000 0.00 0.00 45.19 1.75
445 454 3.433740 GGCCTTCTGGGTCGAAAGATTAT 60.434 47.826 0.00 0.00 45.19 1.28
446 455 3.561725 GCCTTCTGGGTCGAAAGATTATG 59.438 47.826 0.00 0.00 45.19 1.90
447 456 4.683400 GCCTTCTGGGTCGAAAGATTATGA 60.683 45.833 0.00 0.00 45.19 2.15
448 457 4.811557 CCTTCTGGGTCGAAAGATTATGAC 59.188 45.833 0.00 0.00 45.19 3.06
449 458 5.414789 TTCTGGGTCGAAAGATTATGACA 57.585 39.130 0.00 0.00 45.19 3.58
450 459 5.011090 TCTGGGTCGAAAGATTATGACAG 57.989 43.478 0.00 0.00 45.19 3.51
451 460 4.709886 TCTGGGTCGAAAGATTATGACAGA 59.290 41.667 0.00 0.00 45.19 3.41
452 461 5.363868 TCTGGGTCGAAAGATTATGACAGAT 59.636 40.000 0.00 0.00 45.19 2.90
453 462 5.601662 TGGGTCGAAAGATTATGACAGATC 58.398 41.667 0.00 0.00 45.19 2.75
454 463 5.128663 TGGGTCGAAAGATTATGACAGATCA 59.871 40.000 0.00 0.00 45.19 2.92
455 464 5.694006 GGGTCGAAAGATTATGACAGATCAG 59.306 44.000 0.00 0.00 45.19 2.90
456 465 6.276847 GGTCGAAAGATTATGACAGATCAGT 58.723 40.000 0.00 0.00 45.19 3.41
457 466 6.199908 GGTCGAAAGATTATGACAGATCAGTG 59.800 42.308 0.00 0.00 45.19 3.66
458 467 6.975197 GTCGAAAGATTATGACAGATCAGTGA 59.025 38.462 0.00 0.00 45.19 3.41
459 468 6.975197 TCGAAAGATTATGACAGATCAGTGAC 59.025 38.462 0.00 0.00 34.40 3.67
460 469 6.199908 CGAAAGATTATGACAGATCAGTGACC 59.800 42.308 0.00 0.00 38.57 4.02
461 470 5.193663 AGATTATGACAGATCAGTGACCG 57.806 43.478 0.00 0.00 38.57 4.79
462 471 3.801114 TTATGACAGATCAGTGACCGG 57.199 47.619 0.00 0.00 38.57 5.28
463 472 1.852633 ATGACAGATCAGTGACCGGA 58.147 50.000 9.46 0.00 38.57 5.14
464 473 1.852633 TGACAGATCAGTGACCGGAT 58.147 50.000 9.46 0.00 0.00 4.18
465 474 1.478105 TGACAGATCAGTGACCGGATG 59.522 52.381 9.46 0.81 0.00 3.51
466 475 0.826715 ACAGATCAGTGACCGGATGG 59.173 55.000 9.46 0.00 42.84 3.51
467 476 0.531532 CAGATCAGTGACCGGATGGC 60.532 60.000 9.46 0.00 39.70 4.40
468 477 1.227674 GATCAGTGACCGGATGGCC 60.228 63.158 9.46 0.00 39.70 5.36
469 478 1.690219 GATCAGTGACCGGATGGCCT 61.690 60.000 9.46 0.00 39.70 5.19
470 479 1.976132 ATCAGTGACCGGATGGCCTG 61.976 60.000 9.46 6.74 39.70 4.85
471 480 4.101448 AGTGACCGGATGGCCTGC 62.101 66.667 9.46 0.00 39.70 4.85
477 486 3.882326 CGGATGGCCTGCCCTGAT 61.882 66.667 3.32 0.00 34.56 2.90
478 487 2.203451 GGATGGCCTGCCCTGATG 60.203 66.667 3.32 0.00 34.56 3.07
479 488 2.599597 GATGGCCTGCCCTGATGT 59.400 61.111 3.32 0.00 34.56 3.06
480 489 1.708993 GGATGGCCTGCCCTGATGTA 61.709 60.000 3.32 0.00 34.56 2.29
481 490 0.403271 GATGGCCTGCCCTGATGTAT 59.597 55.000 3.32 0.00 34.56 2.29
482 491 1.630369 GATGGCCTGCCCTGATGTATA 59.370 52.381 3.32 0.00 34.56 1.47
483 492 1.517238 TGGCCTGCCCTGATGTATAA 58.483 50.000 3.32 0.00 34.56 0.98
484 493 1.421268 TGGCCTGCCCTGATGTATAAG 59.579 52.381 3.32 0.00 34.56 1.73
485 494 1.699634 GGCCTGCCCTGATGTATAAGA 59.300 52.381 0.00 0.00 0.00 2.10
486 495 2.551071 GGCCTGCCCTGATGTATAAGAC 60.551 54.545 0.00 0.00 0.00 3.01
487 496 2.868044 GCCTGCCCTGATGTATAAGACG 60.868 54.545 0.00 0.00 0.00 4.18
488 497 2.289072 CCTGCCCTGATGTATAAGACGG 60.289 54.545 0.00 0.00 0.00 4.79
489 498 1.691976 TGCCCTGATGTATAAGACGGG 59.308 52.381 0.00 0.00 0.00 5.28
490 499 1.692519 GCCCTGATGTATAAGACGGGT 59.307 52.381 0.00 0.00 32.79 5.28
491 500 2.104281 GCCCTGATGTATAAGACGGGTT 59.896 50.000 0.00 0.00 32.79 4.11
492 501 3.433173 GCCCTGATGTATAAGACGGGTTT 60.433 47.826 0.00 0.00 32.79 3.27
493 502 4.127171 CCCTGATGTATAAGACGGGTTTG 58.873 47.826 0.00 0.00 0.00 2.93
494 503 4.127171 CCTGATGTATAAGACGGGTTTGG 58.873 47.826 0.00 0.00 0.00 3.28
495 504 4.141801 CCTGATGTATAAGACGGGTTTGGA 60.142 45.833 0.00 0.00 0.00 3.53
496 505 5.423704 TGATGTATAAGACGGGTTTGGAA 57.576 39.130 0.00 0.00 0.00 3.53
497 506 5.180271 TGATGTATAAGACGGGTTTGGAAC 58.820 41.667 0.00 0.00 0.00 3.62
498 507 3.587923 TGTATAAGACGGGTTTGGAACG 58.412 45.455 0.00 0.00 0.00 3.95
499 508 2.845363 ATAAGACGGGTTTGGAACGT 57.155 45.000 0.00 0.00 44.35 3.99
502 511 2.909577 ACGGGTTTGGAACGTCCA 59.090 55.556 3.02 3.02 46.61 4.02
510 519 3.664240 TGGAACGTCCAGCTCTAGA 57.336 52.632 3.02 0.00 42.67 2.43
511 520 2.145397 TGGAACGTCCAGCTCTAGAT 57.855 50.000 0.00 0.00 42.67 1.98
512 521 1.751351 TGGAACGTCCAGCTCTAGATG 59.249 52.381 0.00 0.00 42.67 2.90
513 522 1.537135 GGAACGTCCAGCTCTAGATGC 60.537 57.143 0.00 0.00 36.28 3.91
514 523 1.407258 GAACGTCCAGCTCTAGATGCT 59.593 52.381 9.95 9.95 42.06 3.79
515 524 1.028905 ACGTCCAGCTCTAGATGCTC 58.971 55.000 12.13 3.64 38.92 4.26
516 525 1.317613 CGTCCAGCTCTAGATGCTCT 58.682 55.000 12.13 0.00 38.92 4.09
517 526 2.158740 ACGTCCAGCTCTAGATGCTCTA 60.159 50.000 12.13 3.47 38.92 2.43
518 527 2.881513 CGTCCAGCTCTAGATGCTCTAA 59.118 50.000 12.13 1.57 38.92 2.10
519 528 3.505680 CGTCCAGCTCTAGATGCTCTAAT 59.494 47.826 12.13 0.00 38.92 1.73
520 529 4.697828 CGTCCAGCTCTAGATGCTCTAATA 59.302 45.833 12.13 0.00 38.92 0.98
552 561 3.254657 TGTGCACTCCCCGAAATTAAAAG 59.745 43.478 19.41 0.00 0.00 2.27
594 603 2.035617 AAGTTATGCATGCGTCGCCG 62.036 55.000 17.45 7.09 37.07 6.46
774 796 4.802876 AAAAGAGAGAAAACAGTCGCAG 57.197 40.909 0.00 0.00 0.00 5.18
846 939 1.288335 ACTGTACTACCTCCTCCCCAG 59.712 57.143 0.00 0.00 0.00 4.45
863 959 2.225117 CCCAGGAAAGATGAGTTTGGGT 60.225 50.000 0.00 0.00 39.12 4.51
873 969 4.280019 GTTTGGGTCGGGCCTGGT 62.280 66.667 12.87 0.00 37.43 4.00
874 970 2.529643 TTTGGGTCGGGCCTGGTA 60.530 61.111 12.87 0.00 37.43 3.25
875 971 2.598787 TTTGGGTCGGGCCTGGTAG 61.599 63.158 12.87 0.00 37.43 3.18
876 972 3.549433 TTGGGTCGGGCCTGGTAGA 62.549 63.158 12.87 0.00 37.43 2.59
877 973 2.686106 GGGTCGGGCCTGGTAGAA 60.686 66.667 12.87 0.00 37.43 2.10
878 974 2.582978 GGTCGGGCCTGGTAGAAC 59.417 66.667 12.87 1.15 0.00 3.01
879 975 2.582978 GTCGGGCCTGGTAGAACC 59.417 66.667 12.87 0.00 39.22 3.62
880 976 2.686106 TCGGGCCTGGTAGAACCC 60.686 66.667 12.87 0.00 37.50 4.11
963 1080 0.038343 GCCGCACCAACAATCACAAT 60.038 50.000 0.00 0.00 0.00 2.71
964 1081 1.605202 GCCGCACCAACAATCACAATT 60.605 47.619 0.00 0.00 0.00 2.32
965 1082 2.327568 CCGCACCAACAATCACAATTC 58.672 47.619 0.00 0.00 0.00 2.17
988 1105 3.006967 ACAAGACAAGATCCGTAGTTGCT 59.993 43.478 0.00 0.00 0.00 3.91
1159 1282 5.393243 CGATCTCGAAATCCCTAGTTATCCC 60.393 48.000 0.00 0.00 43.02 3.85
1162 1285 3.962718 TCGAAATCCCTAGTTATCCCGTT 59.037 43.478 0.00 0.00 0.00 4.44
1171 1294 6.656270 TCCCTAGTTATCCCGTTTTCTTTTTC 59.344 38.462 0.00 0.00 0.00 2.29
1220 1343 4.329545 GTCTCCAGCGGCAACCCA 62.330 66.667 1.45 0.00 0.00 4.51
1227 1350 2.122167 AGCGGCAACCCACGAAAAA 61.122 52.632 1.45 0.00 0.00 1.94
1228 1351 1.660264 GCGGCAACCCACGAAAAAG 60.660 57.895 0.00 0.00 0.00 2.27
1234 1357 0.185175 AACCCACGAAAAAGCCTCCT 59.815 50.000 0.00 0.00 0.00 3.69
1243 1366 2.299326 AAAAGCCTCCTGCATCTGTT 57.701 45.000 0.00 0.00 44.83 3.16
1258 1385 1.001974 TCTGTTCGTGGACAGGGAATG 59.998 52.381 8.40 0.00 45.54 2.67
1336 1463 9.495572 TTTCAAACTATTTTTCAACAAACTGGT 57.504 25.926 0.00 0.00 0.00 4.00
1356 1485 2.063156 TGAAATCCATGCAAACACGC 57.937 45.000 0.00 0.00 0.00 5.34
1361 1490 1.373246 CCATGCAAACACGCCCAAG 60.373 57.895 0.00 0.00 0.00 3.61
1406 1540 5.794687 TCATACAAACACGGCAGATTTAG 57.205 39.130 0.00 0.00 0.00 1.85
1444 1599 1.482954 AGACTCGCCCCTAAACCTAC 58.517 55.000 0.00 0.00 0.00 3.18
1460 1616 1.717791 CTACATACGACGGCGGTGGA 61.718 60.000 18.49 9.68 43.17 4.02
1483 1639 1.425267 CGTCCAAGCGTGTGTTGTCA 61.425 55.000 0.00 0.00 0.00 3.58
1504 1660 1.266178 TCTTCTGCCGTCTCCATGAA 58.734 50.000 0.00 0.00 0.00 2.57
1567 1729 2.288640 CGAGGAAAAGTAGAACACGGGT 60.289 50.000 0.00 0.00 0.00 5.28
1585 1751 0.107410 GTGATGGAACGGCCCACATA 60.107 55.000 0.00 0.00 39.34 2.29
1623 1790 1.410365 CCTCCCGTGGTCTACTCATCT 60.410 57.143 0.00 0.00 0.00 2.90
1712 1881 2.284625 TCATCGTCCCACTGGGCT 60.285 61.111 9.60 0.00 43.94 5.19
1763 1933 1.291132 GCAACTCGCTATGTTCTCCC 58.709 55.000 0.00 0.00 37.77 4.30
1774 1944 0.965866 TGTTCTCCCTCACGATCGCT 60.966 55.000 16.60 0.00 0.00 4.93
1780 1950 2.169789 CCTCACGATCGCTTGCAGG 61.170 63.158 16.60 11.41 0.00 4.85
1852 2022 0.528466 CGTCGTAGATGGCATGCTGT 60.528 55.000 18.92 6.34 40.43 4.40
1868 2038 1.662026 GCTGTTCCGCGACGAAATTTT 60.662 47.619 8.23 0.00 0.00 1.82
1931 2102 1.679944 GCTTGCTGTAGATCTGGCCAA 60.680 52.381 7.01 0.00 0.00 4.52
1933 2104 3.745480 GCTTGCTGTAGATCTGGCCAATA 60.745 47.826 7.01 0.00 0.00 1.90
1936 2107 2.681706 CTGTAGATCTGGCCAATAGCG 58.318 52.381 7.01 0.00 45.17 4.26
1937 2108 1.344438 TGTAGATCTGGCCAATAGCGG 59.656 52.381 7.01 0.00 45.17 5.52
1938 2109 1.344763 GTAGATCTGGCCAATAGCGGT 59.655 52.381 7.01 0.00 45.17 5.68
1939 2110 1.717032 AGATCTGGCCAATAGCGGTA 58.283 50.000 7.01 0.00 45.17 4.02
1940 2111 2.047061 AGATCTGGCCAATAGCGGTAA 58.953 47.619 7.01 0.00 45.17 2.85
1941 2112 2.438021 AGATCTGGCCAATAGCGGTAAA 59.562 45.455 7.01 0.00 45.17 2.01
1943 2114 2.639065 TCTGGCCAATAGCGGTAAAAG 58.361 47.619 7.01 0.00 45.17 2.27
1945 2116 1.282447 TGGCCAATAGCGGTAAAAGGA 59.718 47.619 0.61 0.00 45.17 3.36
1946 2117 1.947456 GGCCAATAGCGGTAAAAGGAG 59.053 52.381 12.69 0.00 45.17 3.69
1947 2118 2.420967 GGCCAATAGCGGTAAAAGGAGA 60.421 50.000 12.69 0.00 45.17 3.71
1949 2120 3.869065 CCAATAGCGGTAAAAGGAGACA 58.131 45.455 0.00 0.00 0.00 3.41
1950 2121 4.451900 CCAATAGCGGTAAAAGGAGACAT 58.548 43.478 0.00 0.00 0.00 3.06
1964 2159 0.737715 AGACATCGACAAAGGCGCTC 60.738 55.000 7.64 0.00 0.00 5.03
1988 2183 4.783621 GCTGCACCTCCGCCATGA 62.784 66.667 0.00 0.00 0.00 3.07
1992 2187 2.047274 CACCTCCGCCATGACGTT 60.047 61.111 0.00 0.00 0.00 3.99
2023 2230 2.046023 TGCTCCATGGTGAAGCCG 60.046 61.111 17.98 0.00 41.21 5.52
2148 2411 1.802136 GCTTCATCTCCAGCGACAGAG 60.802 57.143 0.00 0.00 0.00 3.35
2187 2450 4.545706 TGGCGGTCATGGCGGATC 62.546 66.667 9.32 0.68 37.19 3.36
2302 2576 1.148310 CGTCCGGATACATCAATGCC 58.852 55.000 7.81 0.00 0.00 4.40
2401 2696 1.481802 GGTAGGTATCCATCCCGTCCA 60.482 57.143 0.00 0.00 0.00 4.02
2413 2713 2.683859 CCGTCCAGTCACGCGTCTA 61.684 63.158 9.86 0.00 38.52 2.59
2430 2730 3.737047 CGTCTACGGCATTGAATAGGTGT 60.737 47.826 0.00 0.00 35.37 4.16
2440 2750 5.739070 GCATTGAATAGGTGTAGACATCGGA 60.739 44.000 0.00 0.00 30.81 4.55
2443 2753 4.579340 TGAATAGGTGTAGACATCGGAGAC 59.421 45.833 0.00 0.00 42.51 3.36
2444 2754 2.810870 AGGTGTAGACATCGGAGACT 57.189 50.000 0.00 0.00 42.51 3.24
2445 2755 3.088789 AGGTGTAGACATCGGAGACTT 57.911 47.619 0.00 0.00 42.51 3.01
2446 2756 2.755655 AGGTGTAGACATCGGAGACTTG 59.244 50.000 0.00 0.00 42.51 3.16
2447 2757 2.492484 GGTGTAGACATCGGAGACTTGT 59.508 50.000 0.00 0.00 42.51 3.16
2448 2758 3.427773 GGTGTAGACATCGGAGACTTGTC 60.428 52.174 2.05 2.05 42.51 3.18
2449 2759 2.418976 TGTAGACATCGGAGACTTGTCG 59.581 50.000 4.36 0.00 42.51 4.35
2450 2760 0.171455 AGACATCGGAGACTTGTCGC 59.829 55.000 4.36 0.00 42.51 5.19
2451 2761 0.171455 GACATCGGAGACTTGTCGCT 59.829 55.000 4.67 0.00 42.51 4.93
2452 2762 0.109086 ACATCGGAGACTTGTCGCTG 60.109 55.000 6.94 6.94 42.51 5.18
2530 2841 4.394712 CCGCCCTGAGCCGTCTTT 62.395 66.667 0.00 0.00 38.78 2.52
2545 2856 1.730064 GTCTTTAATGTTGAGCGGCGA 59.270 47.619 12.98 0.00 0.00 5.54
2547 2858 3.006940 TCTTTAATGTTGAGCGGCGATT 58.993 40.909 12.98 2.30 0.00 3.34
2559 2870 2.621000 GCGATTTCTACAGCGGCG 59.379 61.111 0.51 0.51 0.00 6.46
2617 2930 2.487625 CGGGAGTTGGGTGGAGTTTTTA 60.488 50.000 0.00 0.00 0.00 1.52
2717 3032 3.820467 TGCAAAAGAAATCACGTCCAGAT 59.180 39.130 0.00 0.00 0.00 2.90
2730 3045 1.137872 GTCCAGATCGCTCCATGAACT 59.862 52.381 0.00 0.00 0.00 3.01
2760 3075 1.001068 TGACGTTGAATGGCTTCCGTA 59.999 47.619 0.00 0.00 32.00 4.02
2777 3092 0.172803 GTAGTCCGGACAGCACGATT 59.827 55.000 35.00 15.20 0.00 3.34
2782 3097 1.086696 CCGGACAGCACGATTCAAAT 58.913 50.000 0.00 0.00 0.00 2.32
2788 3103 4.096382 GGACAGCACGATTCAAATGGTTAT 59.904 41.667 0.00 0.00 0.00 1.89
2790 3105 4.458989 ACAGCACGATTCAAATGGTTATGT 59.541 37.500 0.00 0.00 0.00 2.29
2805 3120 3.055602 GGTTATGTGAGGTTTACGGGTCT 60.056 47.826 0.00 0.00 0.00 3.85
2811 3126 0.323957 AGGTTTACGGGTCTGCCTTC 59.676 55.000 0.00 0.00 34.45 3.46
2819 3134 0.034670 GGGTCTGCCTTCAAGATGCT 60.035 55.000 0.00 0.00 34.45 3.79
2820 3135 1.615384 GGGTCTGCCTTCAAGATGCTT 60.615 52.381 0.00 0.00 34.45 3.91
2823 3142 3.376546 GGTCTGCCTTCAAGATGCTTTAG 59.623 47.826 0.00 0.00 0.00 1.85
2964 3284 2.558554 ATAAGCGCAACGACGGCTCT 62.559 55.000 11.47 0.00 35.64 4.09
3043 3363 1.343821 GAAAGCATCGCGTGGTACG 59.656 57.895 5.77 0.00 45.88 3.67
3057 3382 4.032104 GCGTGGTACGTATTTTCTTCGAAT 59.968 41.667 0.00 0.00 44.73 3.34
3062 3387 9.455847 GTGGTACGTATTTTCTTCGAATATACT 57.544 33.333 0.00 0.00 0.00 2.12
3167 3533 0.725117 GGCGTTACCTTCGGAATGTG 59.275 55.000 8.65 0.00 34.51 3.21
3197 3563 6.368516 GCTTCTATATTCTCTGGATGTGCTTC 59.631 42.308 0.00 0.00 0.00 3.86
3206 3572 1.001641 GATGTGCTTCAGCCCTGGT 60.002 57.895 0.00 0.00 41.18 4.00
3261 3627 2.041153 GGGGGCATTAGCAAATCCG 58.959 57.895 0.00 0.00 44.61 4.18
3262 3628 1.363807 GGGGCATTAGCAAATCCGC 59.636 57.895 0.00 0.00 44.61 5.54
3263 3629 1.109323 GGGGCATTAGCAAATCCGCT 61.109 55.000 0.00 0.00 46.26 5.52
3264 3630 0.031178 GGGCATTAGCAAATCCGCTG 59.969 55.000 0.00 0.00 43.68 5.18
3265 3631 0.595825 GGCATTAGCAAATCCGCTGC 60.596 55.000 0.00 0.00 43.68 5.25
3293 3659 3.190337 ACGTGAGTTAGCCGACAAC 57.810 52.632 0.00 0.00 46.40 3.32
3294 3660 0.662374 ACGTGAGTTAGCCGACAACG 60.662 55.000 11.27 11.27 46.40 4.10
3295 3661 0.386352 CGTGAGTTAGCCGACAACGA 60.386 55.000 0.00 0.00 42.66 3.85
3296 3662 1.774639 GTGAGTTAGCCGACAACGAA 58.225 50.000 0.00 0.00 42.66 3.85
3297 3663 2.334838 GTGAGTTAGCCGACAACGAAT 58.665 47.619 0.00 0.00 42.66 3.34
3335 3749 1.609320 GCTGTTCAACAGGGAGGAGAC 60.609 57.143 19.35 0.00 46.01 3.36
3339 3753 1.216710 CAACAGGGAGGAGACGAGC 59.783 63.158 0.00 0.00 0.00 5.03
3361 3775 4.186926 CTGAGGAAGAAGAATTGCATCGA 58.813 43.478 0.00 0.00 0.00 3.59
3388 3802 3.514309 GGGGAAGAAGTAGTTGTCTGCTA 59.486 47.826 0.00 0.00 35.67 3.49
3725 4342 6.216569 TCTCAATGAACATTAGAGCCGATAC 58.783 40.000 15.27 0.00 31.80 2.24
3746 4367 3.818773 ACCATTACTTCAAAACCCTGTCG 59.181 43.478 0.00 0.00 0.00 4.35
4083 5182 2.124695 GGATGGTTCGTCCTGCCC 60.125 66.667 0.00 0.00 36.66 5.36
4135 5236 2.475155 TCTCAACTGGATGGCATCTCT 58.525 47.619 25.48 6.83 0.00 3.10
4170 5308 2.017049 GCGGTCCTGCATCATAGTTTT 58.983 47.619 0.00 0.00 34.15 2.43
4221 5368 1.577328 GGTTGCACATGTCCGTCCTG 61.577 60.000 0.00 0.00 0.00 3.86
4222 5369 1.302431 TTGCACATGTCCGTCCTGG 60.302 57.895 0.00 0.00 40.09 4.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 54 2.977700 CGTCCTACGCAATGCTCAT 58.022 52.632 2.94 0.00 33.65 2.90
68 69 1.469423 GGTCCGGAGAAAGATCACGTC 60.469 57.143 3.06 0.00 0.00 4.34
70 71 0.530744 TGGTCCGGAGAAAGATCACG 59.469 55.000 3.06 0.00 0.00 4.35
113 122 3.673597 ACCTCCCTCTCCCGCTCA 61.674 66.667 0.00 0.00 0.00 4.26
130 139 2.347114 CCAGTGCACGTCCATCCA 59.653 61.111 12.01 0.00 0.00 3.41
142 151 3.114616 CTCTTCACGCCGCCAGTG 61.115 66.667 0.00 0.00 40.71 3.66
143 152 4.379243 CCTCTTCACGCCGCCAGT 62.379 66.667 0.00 0.00 0.00 4.00
148 157 3.665675 CTTCCCCCTCTTCACGCCG 62.666 68.421 0.00 0.00 0.00 6.46
149 158 2.269241 CTTCCCCCTCTTCACGCC 59.731 66.667 0.00 0.00 0.00 5.68
150 159 2.269241 CCTTCCCCCTCTTCACGC 59.731 66.667 0.00 0.00 0.00 5.34
151 160 1.296715 CACCTTCCCCCTCTTCACG 59.703 63.158 0.00 0.00 0.00 4.35
152 161 0.840722 TCCACCTTCCCCCTCTTCAC 60.841 60.000 0.00 0.00 0.00 3.18
153 162 0.121197 ATCCACCTTCCCCCTCTTCA 59.879 55.000 0.00 0.00 0.00 3.02
154 163 0.548510 CATCCACCTTCCCCCTCTTC 59.451 60.000 0.00 0.00 0.00 2.87
155 164 0.921256 CCATCCACCTTCCCCCTCTT 60.921 60.000 0.00 0.00 0.00 2.85
156 165 1.308216 CCATCCACCTTCCCCCTCT 60.308 63.158 0.00 0.00 0.00 3.69
157 166 2.386935 CCCATCCACCTTCCCCCTC 61.387 68.421 0.00 0.00 0.00 4.30
158 167 2.287194 CCCATCCACCTTCCCCCT 60.287 66.667 0.00 0.00 0.00 4.79
159 168 4.143301 GCCCATCCACCTTCCCCC 62.143 72.222 0.00 0.00 0.00 5.40
160 169 1.696314 TAGCCCATCCACCTTCCCC 60.696 63.158 0.00 0.00 0.00 4.81
161 170 1.709994 CCTAGCCCATCCACCTTCCC 61.710 65.000 0.00 0.00 0.00 3.97
162 171 1.709994 CCCTAGCCCATCCACCTTCC 61.710 65.000 0.00 0.00 0.00 3.46
163 172 0.988678 ACCCTAGCCCATCCACCTTC 60.989 60.000 0.00 0.00 0.00 3.46
164 173 0.552615 AACCCTAGCCCATCCACCTT 60.553 55.000 0.00 0.00 0.00 3.50
165 174 1.084842 AACCCTAGCCCATCCACCT 59.915 57.895 0.00 0.00 0.00 4.00
166 175 1.227383 CAACCCTAGCCCATCCACC 59.773 63.158 0.00 0.00 0.00 4.61
167 176 1.453928 GCAACCCTAGCCCATCCAC 60.454 63.158 0.00 0.00 0.00 4.02
168 177 3.006677 GCAACCCTAGCCCATCCA 58.993 61.111 0.00 0.00 0.00 3.41
169 178 2.203209 CGCAACCCTAGCCCATCC 60.203 66.667 0.00 0.00 0.00 3.51
170 179 2.203209 CCGCAACCCTAGCCCATC 60.203 66.667 0.00 0.00 0.00 3.51
171 180 3.809013 CCCGCAACCCTAGCCCAT 61.809 66.667 0.00 0.00 0.00 4.00
173 182 4.484872 GTCCCGCAACCCTAGCCC 62.485 72.222 0.00 0.00 0.00 5.19
174 183 4.832608 CGTCCCGCAACCCTAGCC 62.833 72.222 0.00 0.00 0.00 3.93
186 195 1.729284 TTTAAATCTGACGGCGTCCC 58.271 50.000 34.28 14.65 0.00 4.46
187 196 3.493503 CCTATTTAAATCTGACGGCGTCC 59.506 47.826 34.28 18.38 0.00 4.79
188 197 3.059800 GCCTATTTAAATCTGACGGCGTC 60.060 47.826 31.68 31.68 0.00 5.19
189 198 2.870411 GCCTATTTAAATCTGACGGCGT 59.130 45.455 14.65 14.65 0.00 5.68
190 199 3.521524 GCCTATTTAAATCTGACGGCG 57.478 47.619 4.80 4.80 0.00 6.46
191 200 2.223377 CCGCCTATTTAAATCTGACGGC 59.777 50.000 3.39 9.08 0.00 5.68
192 201 3.724374 TCCGCCTATTTAAATCTGACGG 58.276 45.455 18.49 18.49 39.44 4.79
193 202 5.924475 AATCCGCCTATTTAAATCTGACG 57.076 39.130 3.39 5.10 0.00 4.35
194 203 6.039382 ACCAAATCCGCCTATTTAAATCTGAC 59.961 38.462 3.39 0.00 0.00 3.51
195 204 6.126409 ACCAAATCCGCCTATTTAAATCTGA 58.874 36.000 3.39 0.00 0.00 3.27
196 205 6.263168 AGACCAAATCCGCCTATTTAAATCTG 59.737 38.462 3.39 0.00 0.00 2.90
197 206 6.365520 AGACCAAATCCGCCTATTTAAATCT 58.634 36.000 3.39 0.00 0.00 2.40
198 207 6.565999 CGAGACCAAATCCGCCTATTTAAATC 60.566 42.308 3.39 0.00 0.00 2.17
199 208 5.238650 CGAGACCAAATCCGCCTATTTAAAT 59.761 40.000 5.89 5.89 0.00 1.40
200 209 4.573201 CGAGACCAAATCCGCCTATTTAAA 59.427 41.667 0.00 0.00 0.00 1.52
201 210 4.124238 CGAGACCAAATCCGCCTATTTAA 58.876 43.478 0.00 0.00 0.00 1.52
202 211 3.493699 CCGAGACCAAATCCGCCTATTTA 60.494 47.826 0.00 0.00 0.00 1.40
203 212 2.561569 CGAGACCAAATCCGCCTATTT 58.438 47.619 0.00 0.00 0.00 1.40
204 213 1.202651 CCGAGACCAAATCCGCCTATT 60.203 52.381 0.00 0.00 0.00 1.73
205 214 0.393077 CCGAGACCAAATCCGCCTAT 59.607 55.000 0.00 0.00 0.00 2.57
206 215 1.682451 CCCGAGACCAAATCCGCCTA 61.682 60.000 0.00 0.00 0.00 3.93
207 216 2.584608 CCGAGACCAAATCCGCCT 59.415 61.111 0.00 0.00 0.00 5.52
208 217 2.513897 CCCGAGACCAAATCCGCC 60.514 66.667 0.00 0.00 0.00 6.13
209 218 3.202706 GCCCGAGACCAAATCCGC 61.203 66.667 0.00 0.00 0.00 5.54
210 219 1.815421 CTGCCCGAGACCAAATCCG 60.815 63.158 0.00 0.00 0.00 4.18
211 220 2.115291 GCTGCCCGAGACCAAATCC 61.115 63.158 0.00 0.00 0.00 3.01
212 221 2.464459 CGCTGCCCGAGACCAAATC 61.464 63.158 0.00 0.00 40.02 2.17
213 222 2.436646 CGCTGCCCGAGACCAAAT 60.437 61.111 0.00 0.00 40.02 2.32
214 223 3.621805 TCGCTGCCCGAGACCAAA 61.622 61.111 0.00 0.00 41.89 3.28
230 239 4.874977 GTAGCGCCGGTCCAGCTC 62.875 72.222 16.57 7.66 41.88 4.09
243 252 2.664436 GGTGTGAACGCCGTGTAGC 61.664 63.158 0.00 0.00 36.72 3.58
244 253 3.545911 GGTGTGAACGCCGTGTAG 58.454 61.111 0.00 0.00 36.72 2.74
252 261 2.369629 CGTACCTGCGGTGTGAACG 61.370 63.158 10.01 8.04 36.19 3.95
253 262 2.025418 CCGTACCTGCGGTGTGAAC 61.025 63.158 10.01 0.62 46.11 3.18
254 263 2.340809 CCGTACCTGCGGTGTGAA 59.659 61.111 10.01 0.00 46.11 3.18
261 270 4.208686 GCCTCCTCCGTACCTGCG 62.209 72.222 0.00 0.00 0.00 5.18
262 271 2.370647 GATGCCTCCTCCGTACCTGC 62.371 65.000 0.00 0.00 0.00 4.85
263 272 1.742768 GATGCCTCCTCCGTACCTG 59.257 63.158 0.00 0.00 0.00 4.00
264 273 1.457831 GGATGCCTCCTCCGTACCT 60.458 63.158 0.00 0.00 38.65 3.08
265 274 1.122019 ATGGATGCCTCCTCCGTACC 61.122 60.000 9.61 0.00 42.59 3.34
266 275 0.318762 GATGGATGCCTCCTCCGTAC 59.681 60.000 9.61 0.00 42.59 3.67
267 276 1.179174 CGATGGATGCCTCCTCCGTA 61.179 60.000 9.61 0.00 42.59 4.02
268 277 2.502492 CGATGGATGCCTCCTCCGT 61.502 63.158 9.61 0.00 42.59 4.69
269 278 2.341543 CGATGGATGCCTCCTCCG 59.658 66.667 9.61 8.58 42.59 4.63
270 279 1.838846 TCCGATGGATGCCTCCTCC 60.839 63.158 9.61 0.50 42.59 4.30
271 280 1.369321 GTCCGATGGATGCCTCCTC 59.631 63.158 9.61 3.94 42.59 3.71
272 281 2.143419 GGTCCGATGGATGCCTCCT 61.143 63.158 9.61 0.00 42.59 3.69
273 282 2.427753 GGTCCGATGGATGCCTCC 59.572 66.667 0.22 0.22 42.45 4.30
274 283 2.029666 CGGTCCGATGGATGCCTC 59.970 66.667 4.91 0.00 32.73 4.70
275 284 2.764128 ACGGTCCGATGGATGCCT 60.764 61.111 20.51 0.00 32.73 4.75
276 285 2.280186 GACGGTCCGATGGATGCC 60.280 66.667 20.51 0.00 32.73 4.40
277 286 2.658593 CGACGGTCCGATGGATGC 60.659 66.667 20.51 0.00 32.73 3.91
278 287 2.027605 CCGACGGTCCGATGGATG 59.972 66.667 20.51 0.37 32.73 3.51
279 288 3.224324 CCCGACGGTCCGATGGAT 61.224 66.667 20.51 0.00 32.73 3.41
280 289 4.746309 ACCCGACGGTCCGATGGA 62.746 66.667 20.51 0.00 38.28 3.41
281 290 3.305177 AAACCCGACGGTCCGATGG 62.305 63.158 20.51 18.05 43.71 3.51
282 291 1.808390 GAAACCCGACGGTCCGATG 60.808 63.158 20.51 9.44 43.71 3.84
283 292 2.575461 GAAACCCGACGGTCCGAT 59.425 61.111 20.51 1.57 43.71 4.18
284 293 3.683937 GGAAACCCGACGGTCCGA 61.684 66.667 20.51 0.00 43.71 4.55
294 303 4.772687 GGACTCGCCCGGAAACCC 62.773 72.222 0.73 0.00 0.00 4.11
309 318 3.407967 GAAGGGGTCCCATGCGGA 61.408 66.667 10.98 0.00 38.83 5.54
310 319 4.856801 CGAAGGGGTCCCATGCGG 62.857 72.222 15.72 0.00 38.92 5.69
311 320 4.096003 ACGAAGGGGTCCCATGCG 62.096 66.667 21.75 21.75 38.92 4.73
312 321 2.124695 GACGAAGGGGTCCCATGC 60.125 66.667 10.98 0.00 38.92 4.06
313 322 1.221840 CAGACGAAGGGGTCCCATG 59.778 63.158 10.98 0.00 37.66 3.66
314 323 1.229529 ACAGACGAAGGGGTCCCAT 60.230 57.895 10.98 0.00 37.66 4.00
315 324 1.911766 GACAGACGAAGGGGTCCCA 60.912 63.158 10.98 0.00 37.66 4.37
316 325 2.657066 GGACAGACGAAGGGGTCCC 61.657 68.421 0.00 0.00 43.14 4.46
317 326 2.979649 GGACAGACGAAGGGGTCC 59.020 66.667 0.00 0.00 42.60 4.46
318 327 0.816373 GTAGGACAGACGAAGGGGTC 59.184 60.000 0.00 0.00 37.19 4.46
319 328 0.964358 CGTAGGACAGACGAAGGGGT 60.964 60.000 0.00 0.00 42.98 4.95
320 329 0.964358 ACGTAGGACAGACGAAGGGG 60.964 60.000 1.71 0.00 42.98 4.79
321 330 0.170561 CACGTAGGACAGACGAAGGG 59.829 60.000 1.71 0.00 42.98 3.95
322 331 0.456312 GCACGTAGGACAGACGAAGG 60.456 60.000 1.71 0.00 42.98 3.46
323 332 0.456312 GGCACGTAGGACAGACGAAG 60.456 60.000 1.71 0.00 42.98 3.79
324 333 1.582968 GGCACGTAGGACAGACGAA 59.417 57.895 1.71 0.00 42.98 3.85
325 334 3.271014 GGCACGTAGGACAGACGA 58.729 61.111 1.71 0.00 42.98 4.20
350 359 4.016706 GATATGGGGGCGTCCGGG 62.017 72.222 0.00 0.00 36.01 5.73
351 360 4.016706 GGATATGGGGGCGTCCGG 62.017 72.222 0.00 0.00 36.01 5.14
352 361 4.373116 CGGATATGGGGGCGTCCG 62.373 72.222 0.00 0.00 46.26 4.79
353 362 4.699522 GCGGATATGGGGGCGTCC 62.700 72.222 0.00 0.00 0.00 4.79
354 363 4.699522 GGCGGATATGGGGGCGTC 62.700 72.222 0.00 0.00 0.00 5.19
358 367 0.993509 ATATGGGGCGGATATGGGGG 60.994 60.000 0.00 0.00 0.00 5.40
359 368 0.926293 AATATGGGGCGGATATGGGG 59.074 55.000 0.00 0.00 0.00 4.96
360 369 2.025416 TCAAATATGGGGCGGATATGGG 60.025 50.000 0.00 0.00 0.00 4.00
361 370 3.282021 CTCAAATATGGGGCGGATATGG 58.718 50.000 0.00 0.00 0.00 2.74
362 371 2.684881 GCTCAAATATGGGGCGGATATG 59.315 50.000 0.00 0.00 0.00 1.78
363 372 2.578021 AGCTCAAATATGGGGCGGATAT 59.422 45.455 0.00 0.00 33.29 1.63
364 373 1.985159 AGCTCAAATATGGGGCGGATA 59.015 47.619 0.00 0.00 33.29 2.59
365 374 0.773644 AGCTCAAATATGGGGCGGAT 59.226 50.000 0.00 0.00 33.29 4.18
366 375 0.179020 CAGCTCAAATATGGGGCGGA 60.179 55.000 0.00 0.00 33.29 5.54
367 376 1.174712 CCAGCTCAAATATGGGGCGG 61.175 60.000 0.00 0.00 33.29 6.13
368 377 0.179020 TCCAGCTCAAATATGGGGCG 60.179 55.000 0.00 0.00 34.71 6.13
369 378 2.299326 ATCCAGCTCAAATATGGGGC 57.701 50.000 0.00 0.00 34.71 5.80
370 379 5.183530 TCATATCCAGCTCAAATATGGGG 57.816 43.478 14.83 0.00 35.19 4.96
371 380 5.191426 CCTCATATCCAGCTCAAATATGGG 58.809 45.833 14.83 12.72 35.19 4.00
372 381 5.191426 CCCTCATATCCAGCTCAAATATGG 58.809 45.833 14.83 0.74 35.19 2.74
373 382 5.191426 CCCCTCATATCCAGCTCAAATATG 58.809 45.833 11.00 11.00 35.58 1.78
374 383 4.854436 ACCCCTCATATCCAGCTCAAATAT 59.146 41.667 0.00 0.00 0.00 1.28
375 384 4.042062 CACCCCTCATATCCAGCTCAAATA 59.958 45.833 0.00 0.00 0.00 1.40
376 385 3.059097 ACCCCTCATATCCAGCTCAAAT 58.941 45.455 0.00 0.00 0.00 2.32
377 386 2.173356 CACCCCTCATATCCAGCTCAAA 59.827 50.000 0.00 0.00 0.00 2.69
378 387 1.770658 CACCCCTCATATCCAGCTCAA 59.229 52.381 0.00 0.00 0.00 3.02
379 388 1.427809 CACCCCTCATATCCAGCTCA 58.572 55.000 0.00 0.00 0.00 4.26
380 389 0.036022 GCACCCCTCATATCCAGCTC 59.964 60.000 0.00 0.00 0.00 4.09
381 390 1.422161 GGCACCCCTCATATCCAGCT 61.422 60.000 0.00 0.00 0.00 4.24
382 391 1.073897 GGCACCCCTCATATCCAGC 59.926 63.158 0.00 0.00 0.00 4.85
383 392 1.121407 TCGGCACCCCTCATATCCAG 61.121 60.000 0.00 0.00 0.00 3.86
384 393 0.473694 ATCGGCACCCCTCATATCCA 60.474 55.000 0.00 0.00 0.00 3.41
385 394 0.250513 GATCGGCACCCCTCATATCC 59.749 60.000 0.00 0.00 0.00 2.59
386 395 0.976641 TGATCGGCACCCCTCATATC 59.023 55.000 0.00 0.00 0.00 1.63
387 396 0.979665 CTGATCGGCACCCCTCATAT 59.020 55.000 0.00 0.00 0.00 1.78
388 397 0.398522 ACTGATCGGCACCCCTCATA 60.399 55.000 0.00 0.00 0.00 2.15
389 398 1.690219 GACTGATCGGCACCCCTCAT 61.690 60.000 0.00 0.00 0.00 2.90
390 399 2.284625 ACTGATCGGCACCCCTCA 60.285 61.111 0.00 0.00 0.00 3.86
391 400 2.501610 GACTGATCGGCACCCCTC 59.498 66.667 0.00 0.00 0.00 4.30
392 401 3.083997 GGACTGATCGGCACCCCT 61.084 66.667 0.00 0.00 0.00 4.79
393 402 3.391665 CTGGACTGATCGGCACCCC 62.392 68.421 13.55 6.07 0.00 4.95
394 403 2.187946 CTGGACTGATCGGCACCC 59.812 66.667 13.55 8.15 0.00 4.61
395 404 2.187946 CCTGGACTGATCGGCACC 59.812 66.667 0.00 6.44 0.00 5.01
396 405 2.512515 GCCTGGACTGATCGGCAC 60.513 66.667 0.00 0.00 42.06 5.01
397 406 4.147449 CGCCTGGACTGATCGGCA 62.147 66.667 0.00 0.00 42.59 5.69
398 407 3.665675 AACGCCTGGACTGATCGGC 62.666 63.158 0.00 0.00 39.14 5.54
399 408 0.174845 TAAACGCCTGGACTGATCGG 59.825 55.000 0.00 0.00 0.00 4.18
400 409 1.927174 CTTAAACGCCTGGACTGATCG 59.073 52.381 0.00 0.00 0.00 3.69
401 410 2.280628 CCTTAAACGCCTGGACTGATC 58.719 52.381 0.00 0.00 0.00 2.92
402 411 1.065418 CCCTTAAACGCCTGGACTGAT 60.065 52.381 0.00 0.00 0.00 2.90
403 412 0.323629 CCCTTAAACGCCTGGACTGA 59.676 55.000 0.00 0.00 0.00 3.41
404 413 0.676782 CCCCTTAAACGCCTGGACTG 60.677 60.000 0.00 0.00 0.00 3.51
405 414 1.683441 CCCCTTAAACGCCTGGACT 59.317 57.895 0.00 0.00 0.00 3.85
406 415 1.378119 CCCCCTTAAACGCCTGGAC 60.378 63.158 0.00 0.00 0.00 4.02
407 416 3.083386 CCCCCTTAAACGCCTGGA 58.917 61.111 0.00 0.00 0.00 3.86
408 417 2.754254 GCCCCCTTAAACGCCTGG 60.754 66.667 0.00 0.00 0.00 4.45
409 418 2.754254 GGCCCCCTTAAACGCCTG 60.754 66.667 0.00 0.00 38.41 4.85
410 419 2.939353 AGGCCCCCTTAAACGCCT 60.939 61.111 0.00 0.00 46.96 5.52
411 420 2.036731 AAGGCCCCCTTAAACGCC 59.963 61.111 0.00 0.00 42.74 5.68
412 421 1.001269 AGAAGGCCCCCTTAAACGC 60.001 57.895 0.00 0.00 44.82 4.84
413 422 0.679960 CCAGAAGGCCCCCTTAAACG 60.680 60.000 0.00 0.00 44.82 3.60
414 423 0.324368 CCCAGAAGGCCCCCTTAAAC 60.324 60.000 0.00 0.00 44.82 2.01
415 424 0.778479 ACCCAGAAGGCCCCCTTAAA 60.778 55.000 0.00 0.00 44.82 1.52
416 425 1.151452 ACCCAGAAGGCCCCCTTAA 60.151 57.895 0.00 0.00 44.82 1.85
417 426 1.618447 GACCCAGAAGGCCCCCTTA 60.618 63.158 0.00 0.00 44.82 2.69
421 430 2.821679 CTTTCGACCCAGAAGGCCCC 62.822 65.000 0.00 0.00 40.58 5.80
422 431 1.377333 CTTTCGACCCAGAAGGCCC 60.377 63.158 0.00 0.00 40.58 5.80
423 432 0.253327 ATCTTTCGACCCAGAAGGCC 59.747 55.000 0.00 0.00 40.58 5.19
424 433 2.115343 AATCTTTCGACCCAGAAGGC 57.885 50.000 0.00 0.00 40.58 4.35
425 434 4.811557 GTCATAATCTTTCGACCCAGAAGG 59.188 45.833 0.00 0.00 43.78 3.46
426 435 5.419542 TGTCATAATCTTTCGACCCAGAAG 58.580 41.667 0.00 0.00 0.00 2.85
427 436 5.186992 TCTGTCATAATCTTTCGACCCAGAA 59.813 40.000 0.00 0.00 0.00 3.02
428 437 4.709886 TCTGTCATAATCTTTCGACCCAGA 59.290 41.667 0.00 0.00 0.00 3.86
429 438 5.011090 TCTGTCATAATCTTTCGACCCAG 57.989 43.478 0.00 0.00 0.00 4.45
430 439 5.128663 TGATCTGTCATAATCTTTCGACCCA 59.871 40.000 0.00 0.00 0.00 4.51
431 440 5.601662 TGATCTGTCATAATCTTTCGACCC 58.398 41.667 0.00 0.00 0.00 4.46
432 441 6.199908 CACTGATCTGTCATAATCTTTCGACC 59.800 42.308 1.69 0.00 32.98 4.79
433 442 6.975197 TCACTGATCTGTCATAATCTTTCGAC 59.025 38.462 1.69 0.00 32.98 4.20
434 443 6.975197 GTCACTGATCTGTCATAATCTTTCGA 59.025 38.462 1.69 0.00 32.98 3.71
435 444 6.199908 GGTCACTGATCTGTCATAATCTTTCG 59.800 42.308 1.69 0.00 32.98 3.46
436 445 6.199908 CGGTCACTGATCTGTCATAATCTTTC 59.800 42.308 1.69 0.00 32.98 2.62
437 446 6.045318 CGGTCACTGATCTGTCATAATCTTT 58.955 40.000 1.69 0.00 32.98 2.52
438 447 5.452496 CCGGTCACTGATCTGTCATAATCTT 60.452 44.000 1.69 0.00 32.98 2.40
439 448 4.038522 CCGGTCACTGATCTGTCATAATCT 59.961 45.833 1.69 0.00 32.98 2.40
440 449 4.038042 TCCGGTCACTGATCTGTCATAATC 59.962 45.833 0.00 0.00 32.98 1.75
441 450 3.960755 TCCGGTCACTGATCTGTCATAAT 59.039 43.478 0.00 0.00 32.98 1.28
442 451 3.361786 TCCGGTCACTGATCTGTCATAA 58.638 45.455 0.00 0.00 32.98 1.90
443 452 3.012934 TCCGGTCACTGATCTGTCATA 57.987 47.619 0.00 0.00 32.98 2.15
444 453 1.852633 TCCGGTCACTGATCTGTCAT 58.147 50.000 0.00 0.00 32.98 3.06
445 454 1.478105 CATCCGGTCACTGATCTGTCA 59.522 52.381 0.00 0.00 0.00 3.58
446 455 1.202463 CCATCCGGTCACTGATCTGTC 60.202 57.143 0.00 0.00 0.00 3.51
447 456 0.826715 CCATCCGGTCACTGATCTGT 59.173 55.000 0.00 0.00 0.00 3.41
448 457 0.531532 GCCATCCGGTCACTGATCTG 60.532 60.000 0.00 0.00 33.28 2.90
449 458 1.690219 GGCCATCCGGTCACTGATCT 61.690 60.000 0.00 0.00 36.65 2.75
450 459 1.227674 GGCCATCCGGTCACTGATC 60.228 63.158 0.00 0.00 36.65 2.92
451 460 1.690633 AGGCCATCCGGTCACTGAT 60.691 57.895 5.01 0.00 40.51 2.90
452 461 2.284625 AGGCCATCCGGTCACTGA 60.285 61.111 5.01 0.00 40.51 3.41
453 462 2.124983 CAGGCCATCCGGTCACTG 60.125 66.667 5.01 0.53 40.51 3.66
454 463 4.101448 GCAGGCCATCCGGTCACT 62.101 66.667 5.01 0.00 40.51 3.41
460 469 3.882326 ATCAGGGCAGGCCATCCG 61.882 66.667 16.94 0.36 37.98 4.18
461 470 1.708993 TACATCAGGGCAGGCCATCC 61.709 60.000 16.94 4.89 37.98 3.51
462 471 0.403271 ATACATCAGGGCAGGCCATC 59.597 55.000 16.94 0.00 37.98 3.51
463 472 1.746157 TATACATCAGGGCAGGCCAT 58.254 50.000 16.94 3.40 37.98 4.40
464 473 1.421268 CTTATACATCAGGGCAGGCCA 59.579 52.381 16.94 0.00 37.98 5.36
465 474 1.699634 TCTTATACATCAGGGCAGGCC 59.300 52.381 4.33 4.33 0.00 5.19
466 475 2.772287 GTCTTATACATCAGGGCAGGC 58.228 52.381 0.00 0.00 0.00 4.85
467 476 2.289072 CCGTCTTATACATCAGGGCAGG 60.289 54.545 0.00 0.00 0.00 4.85
468 477 2.289072 CCCGTCTTATACATCAGGGCAG 60.289 54.545 0.00 0.00 0.00 4.85
469 478 1.691976 CCCGTCTTATACATCAGGGCA 59.308 52.381 0.00 0.00 0.00 5.36
470 479 1.692519 ACCCGTCTTATACATCAGGGC 59.307 52.381 0.00 0.00 40.94 5.19
471 480 4.127171 CAAACCCGTCTTATACATCAGGG 58.873 47.826 0.00 0.00 42.82 4.45
472 481 4.127171 CCAAACCCGTCTTATACATCAGG 58.873 47.826 0.00 0.00 0.00 3.86
473 482 5.018539 TCCAAACCCGTCTTATACATCAG 57.981 43.478 0.00 0.00 0.00 2.90
474 483 5.180271 GTTCCAAACCCGTCTTATACATCA 58.820 41.667 0.00 0.00 0.00 3.07
475 484 4.269363 CGTTCCAAACCCGTCTTATACATC 59.731 45.833 0.00 0.00 0.00 3.06
476 485 4.186159 CGTTCCAAACCCGTCTTATACAT 58.814 43.478 0.00 0.00 0.00 2.29
477 486 3.006752 ACGTTCCAAACCCGTCTTATACA 59.993 43.478 0.00 0.00 0.00 2.29
478 487 3.588955 ACGTTCCAAACCCGTCTTATAC 58.411 45.455 0.00 0.00 0.00 1.47
479 488 3.848726 GACGTTCCAAACCCGTCTTATA 58.151 45.455 4.34 0.00 45.49 0.98
480 489 2.691927 GACGTTCCAAACCCGTCTTAT 58.308 47.619 4.34 0.00 45.49 1.73
481 490 2.153366 GACGTTCCAAACCCGTCTTA 57.847 50.000 4.34 0.00 45.49 2.10
482 491 2.996444 GACGTTCCAAACCCGTCTT 58.004 52.632 4.34 0.00 45.49 3.01
483 492 1.688269 TGGACGTTCCAAACCCGTCT 61.688 55.000 10.68 0.00 45.00 4.18
484 493 1.227615 TGGACGTTCCAAACCCGTC 60.228 57.895 4.51 0.00 45.00 4.79
485 494 2.909577 TGGACGTTCCAAACCCGT 59.090 55.556 4.51 0.00 45.00 5.28
492 501 1.751351 CATCTAGAGCTGGACGTTCCA 59.249 52.381 0.00 6.57 45.98 3.53
493 502 1.537135 GCATCTAGAGCTGGACGTTCC 60.537 57.143 0.00 0.00 36.96 3.62
494 503 1.407258 AGCATCTAGAGCTGGACGTTC 59.593 52.381 13.71 0.00 41.61 3.95
495 504 1.407258 GAGCATCTAGAGCTGGACGTT 59.593 52.381 17.82 0.00 43.58 3.99
496 505 1.028905 GAGCATCTAGAGCTGGACGT 58.971 55.000 17.82 0.00 43.58 4.34
497 506 3.863681 GAGCATCTAGAGCTGGACG 57.136 57.895 17.82 0.00 43.58 4.79
513 522 3.243737 TGCACATACCCACGCTATTAGAG 60.244 47.826 0.00 0.00 0.00 2.43
514 523 2.696187 TGCACATACCCACGCTATTAGA 59.304 45.455 0.00 0.00 0.00 2.10
515 524 2.800544 GTGCACATACCCACGCTATTAG 59.199 50.000 13.17 0.00 0.00 1.73
516 525 2.432874 AGTGCACATACCCACGCTATTA 59.567 45.455 21.04 0.00 37.07 0.98
517 526 1.209504 AGTGCACATACCCACGCTATT 59.790 47.619 21.04 0.00 37.07 1.73
518 527 0.830648 AGTGCACATACCCACGCTAT 59.169 50.000 21.04 0.00 37.07 2.97
519 528 0.174845 GAGTGCACATACCCACGCTA 59.825 55.000 21.04 0.00 37.07 4.26
520 529 1.079127 GAGTGCACATACCCACGCT 60.079 57.895 21.04 0.00 37.07 5.07
530 539 2.570415 TTAATTTCGGGGAGTGCACA 57.430 45.000 21.04 0.00 0.00 4.57
571 580 1.599071 CGACGCATGCATAACTTCCAT 59.401 47.619 19.57 0.00 0.00 3.41
594 603 2.546494 GGGTGACATGCATAGCGCC 61.546 63.158 17.74 17.74 41.33 6.53
597 606 0.181114 TCCAGGGTGACATGCATAGC 59.819 55.000 0.00 0.00 41.82 2.97
757 778 1.789506 AGCTGCGACTGTTTTCTCTC 58.210 50.000 0.00 0.00 0.00 3.20
829 918 0.932211 TCCTGGGGAGGAGGTAGTAC 59.068 60.000 0.00 0.00 33.38 2.73
846 939 2.084546 CCGACCCAAACTCATCTTTCC 58.915 52.381 0.00 0.00 0.00 3.13
863 959 2.686106 GGGTTCTACCAGGCCCGA 60.686 66.667 0.00 0.00 41.02 5.14
873 969 1.991167 ACAATCCGCCCGGGTTCTA 60.991 57.895 24.63 5.83 36.26 2.10
874 970 3.327404 ACAATCCGCCCGGGTTCT 61.327 61.111 24.63 1.19 36.26 3.01
875 971 2.886730 ATCACAATCCGCCCGGGTTC 62.887 60.000 24.63 4.95 36.26 3.62
876 972 1.628238 TATCACAATCCGCCCGGGTT 61.628 55.000 24.63 5.06 39.60 4.11
877 973 1.415672 ATATCACAATCCGCCCGGGT 61.416 55.000 24.63 0.00 37.00 5.28
878 974 0.250727 AATATCACAATCCGCCCGGG 60.251 55.000 19.09 19.09 35.59 5.73
879 975 1.604604 AAATATCACAATCCGCCCGG 58.395 50.000 0.00 0.00 0.00 5.73
880 976 5.445407 CGTATTAAATATCACAATCCGCCCG 60.445 44.000 0.00 0.00 0.00 6.13
923 1029 1.153349 GGGTTCTGATCCTCACGGC 60.153 63.158 4.85 0.00 0.00 5.68
926 1038 1.414550 GGCTAGGGTTCTGATCCTCAC 59.585 57.143 4.85 0.00 34.75 3.51
932 1044 1.522569 GTGCGGCTAGGGTTCTGAT 59.477 57.895 0.00 0.00 0.00 2.90
933 1045 2.656069 GGTGCGGCTAGGGTTCTGA 61.656 63.158 0.00 0.00 0.00 3.27
963 1080 4.866508 ACTACGGATCTTGTCTTGTGAA 57.133 40.909 0.00 0.00 0.00 3.18
964 1081 4.556233 CAACTACGGATCTTGTCTTGTGA 58.444 43.478 0.00 0.00 0.00 3.58
965 1082 3.123621 GCAACTACGGATCTTGTCTTGTG 59.876 47.826 0.00 0.00 0.00 3.33
988 1105 0.249120 ATCGCCATCTTCGGTCAACA 59.751 50.000 0.00 0.00 0.00 3.33
1210 1333 1.660264 CTTTTTCGTGGGTTGCCGC 60.660 57.895 0.00 0.00 0.00 6.53
1220 1343 1.168714 GATGCAGGAGGCTTTTTCGT 58.831 50.000 0.00 0.00 45.15 3.85
1222 1345 2.165998 ACAGATGCAGGAGGCTTTTTC 58.834 47.619 0.00 0.00 45.15 2.29
1227 1350 1.220206 CGAACAGATGCAGGAGGCT 59.780 57.895 0.00 0.00 45.15 4.58
1228 1351 1.078848 ACGAACAGATGCAGGAGGC 60.079 57.895 0.00 0.00 45.13 4.70
1243 1366 0.895530 GACTCATTCCCTGTCCACGA 59.104 55.000 0.00 0.00 0.00 4.35
1267 1394 1.874129 TGACCTCCCGTATCCATGTT 58.126 50.000 0.00 0.00 0.00 2.71
1336 1463 2.402305 GCGTGTTTGCATGGATTTCAA 58.598 42.857 0.00 0.00 34.15 2.69
1356 1485 8.236585 TCCATCATGTTTATATGAAACTTGGG 57.763 34.615 15.16 11.61 40.21 4.12
1444 1599 2.581409 GTCCACCGCCGTCGTATG 60.581 66.667 0.00 0.00 0.00 2.39
1473 1629 2.349817 CGGCAGAAGAATGACAACACAC 60.350 50.000 0.00 0.00 0.00 3.82
1483 1639 1.833630 TCATGGAGACGGCAGAAGAAT 59.166 47.619 0.00 0.00 0.00 2.40
1504 1660 2.091541 CATTGGTCTTATTGCCGGTGT 58.908 47.619 1.90 0.00 0.00 4.16
1553 1715 2.253610 TCCATCACCCGTGTTCTACTT 58.746 47.619 0.00 0.00 0.00 2.24
1567 1729 0.180171 CTATGTGGGCCGTTCCATCA 59.820 55.000 0.00 0.00 39.26 3.07
1623 1790 4.430765 GGCGCGGACTCCTTCGAA 62.431 66.667 8.83 0.00 0.00 3.71
1679 1847 1.945394 GATGACAGCAAGGCACCATAG 59.055 52.381 0.00 0.00 38.79 2.23
1680 1848 1.743431 CGATGACAGCAAGGCACCATA 60.743 52.381 0.00 0.00 38.79 2.74
1750 1920 0.738975 TCGTGAGGGAGAACATAGCG 59.261 55.000 0.00 0.00 0.00 4.26
1763 1933 1.446792 ACCTGCAAGCGATCGTGAG 60.447 57.895 17.81 7.67 0.00 3.51
1834 2004 1.594862 GAACAGCATGCCATCTACGAC 59.405 52.381 15.66 0.00 42.53 4.34
1852 2022 0.945813 ACCAAAATTTCGTCGCGGAA 59.054 45.000 6.13 0.00 0.00 4.30
1890 2060 1.079819 GCAAGCGAGTAGGCTGTGA 60.080 57.895 0.00 0.00 43.93 3.58
1931 2102 3.635373 TCGATGTCTCCTTTTACCGCTAT 59.365 43.478 0.00 0.00 0.00 2.97
1933 2104 1.822990 TCGATGTCTCCTTTTACCGCT 59.177 47.619 0.00 0.00 0.00 5.52
1936 2107 4.392138 CCTTTGTCGATGTCTCCTTTTACC 59.608 45.833 0.00 0.00 0.00 2.85
1937 2108 4.142881 GCCTTTGTCGATGTCTCCTTTTAC 60.143 45.833 0.00 0.00 0.00 2.01
1938 2109 4.000988 GCCTTTGTCGATGTCTCCTTTTA 58.999 43.478 0.00 0.00 0.00 1.52
1939 2110 2.814336 GCCTTTGTCGATGTCTCCTTTT 59.186 45.455 0.00 0.00 0.00 2.27
1940 2111 2.427506 GCCTTTGTCGATGTCTCCTTT 58.572 47.619 0.00 0.00 0.00 3.11
1941 2112 1.673033 CGCCTTTGTCGATGTCTCCTT 60.673 52.381 0.00 0.00 0.00 3.36
1943 2114 1.696832 GCGCCTTTGTCGATGTCTCC 61.697 60.000 0.00 0.00 0.00 3.71
1945 2116 0.737715 GAGCGCCTTTGTCGATGTCT 60.738 55.000 2.29 0.00 0.00 3.41
1946 2117 1.710339 GAGCGCCTTTGTCGATGTC 59.290 57.895 2.29 0.00 0.00 3.06
1947 2118 2.094659 CGAGCGCCTTTGTCGATGT 61.095 57.895 10.12 0.00 35.70 3.06
1949 2120 3.188786 GCGAGCGCCTTTGTCGAT 61.189 61.111 18.65 0.00 35.70 3.59
1981 2176 0.586319 AGTTCAACAACGTCATGGCG 59.414 50.000 19.93 19.93 37.61 5.69
1988 2183 1.817941 AGGCGCAGTTCAACAACGT 60.818 52.632 10.83 0.00 37.61 3.99
1992 2187 2.203195 AGCAGGCGCAGTTCAACA 60.203 55.556 10.83 0.00 42.27 3.33
2187 2450 1.277580 ATCCTCCTCCCTTGCACTGG 61.278 60.000 0.00 0.00 0.00 4.00
2278 2552 1.040893 TGATGTATCCGGACGCCTGT 61.041 55.000 6.12 0.00 0.00 4.00
2290 2564 0.884704 GACGCCGGGCATTGATGTAT 60.885 55.000 20.71 0.00 0.00 2.29
2292 2566 2.824041 GACGCCGGGCATTGATGT 60.824 61.111 20.71 7.30 0.00 3.06
2401 2696 2.209064 AATGCCGTAGACGCGTGACT 62.209 55.000 20.70 11.77 38.18 3.41
2413 2713 3.196901 TGTCTACACCTATTCAATGCCGT 59.803 43.478 0.00 0.00 0.00 5.68
2430 2730 1.400846 GCGACAAGTCTCCGATGTCTA 59.599 52.381 3.94 0.00 40.95 2.59
2530 2841 2.627945 AGAAATCGCCGCTCAACATTA 58.372 42.857 0.00 0.00 0.00 1.90
2545 2856 1.665679 CATTCACGCCGCTGTAGAAAT 59.334 47.619 0.00 0.00 0.00 2.17
2547 2858 1.358725 GCATTCACGCCGCTGTAGAA 61.359 55.000 0.00 0.00 0.00 2.10
2559 2870 3.818787 CCAGCTGCCCGCATTCAC 61.819 66.667 8.66 0.00 42.61 3.18
2603 2916 1.479757 GCCCACTAAAAACTCCACCCA 60.480 52.381 0.00 0.00 0.00 4.51
2671 2984 0.037734 GGAGACAAACGTGGGGGAAT 59.962 55.000 0.00 0.00 0.00 3.01
2672 2985 1.452801 GGAGACAAACGTGGGGGAA 59.547 57.895 0.00 0.00 0.00 3.97
2717 3032 8.029522 GTCAATCTATATTAGTTCATGGAGCGA 58.970 37.037 0.00 0.00 0.00 4.93
2730 3045 8.902540 AAGCCATTCAACGTCAATCTATATTA 57.097 30.769 0.00 0.00 0.00 0.98
2760 3075 1.215647 GAATCGTGCTGTCCGGACT 59.784 57.895 33.39 12.37 0.00 3.85
2777 3092 5.413213 CCGTAAACCTCACATAACCATTTGA 59.587 40.000 0.00 0.00 0.00 2.69
2782 3097 2.638855 ACCCGTAAACCTCACATAACCA 59.361 45.455 0.00 0.00 0.00 3.67
2788 3103 0.034337 GCAGACCCGTAAACCTCACA 59.966 55.000 0.00 0.00 0.00 3.58
2790 3105 0.834687 AGGCAGACCCGTAAACCTCA 60.835 55.000 0.00 0.00 39.21 3.86
2805 3120 3.077484 AGCTAAAGCATCTTGAAGGCA 57.923 42.857 4.54 0.00 45.16 4.75
2811 3126 6.968131 TGTGTAGTTAGCTAAAGCATCTTG 57.032 37.500 7.99 0.00 45.16 3.02
2819 3134 4.142773 GCGGCATTTGTGTAGTTAGCTAAA 60.143 41.667 7.99 0.00 0.00 1.85
2820 3135 3.372822 GCGGCATTTGTGTAGTTAGCTAA 59.627 43.478 0.86 0.86 0.00 3.09
2823 3142 1.466950 TGCGGCATTTGTGTAGTTAGC 59.533 47.619 0.00 0.00 0.00 3.09
2964 3284 3.845178 CTGGACGTTTGAGTAGCACATA 58.155 45.455 0.00 0.00 0.00 2.29
3167 3533 7.492020 CACATCCAGAGAATATAGAAGCTATGC 59.508 40.741 0.00 0.00 0.00 3.14
3197 3563 3.127533 GCGCTTACACCAGGGCTG 61.128 66.667 0.00 0.00 46.59 4.85
3253 3619 2.101770 GCTGAGCAGCGGATTTGC 59.898 61.111 6.73 0.00 45.29 3.68
3265 3631 2.523184 TAACTCACGTCGGCGCTGAG 62.523 60.000 28.06 28.06 44.17 3.35
3266 3632 2.523184 CTAACTCACGTCGGCGCTGA 62.523 60.000 16.69 16.69 42.83 4.26
3267 3633 2.126618 TAACTCACGTCGGCGCTG 60.127 61.111 10.50 10.86 42.83 5.18
3268 3634 2.178521 CTAACTCACGTCGGCGCT 59.821 61.111 10.50 0.00 42.83 5.92
3269 3635 3.542742 GCTAACTCACGTCGGCGC 61.543 66.667 10.50 0.00 42.83 6.53
3270 3636 2.879462 GGCTAACTCACGTCGGCG 60.879 66.667 8.42 8.42 44.93 6.46
3271 3637 2.879462 CGGCTAACTCACGTCGGC 60.879 66.667 0.00 0.00 0.00 5.54
3272 3638 1.513586 GTCGGCTAACTCACGTCGG 60.514 63.158 0.00 0.00 0.00 4.79
3273 3639 0.386352 TTGTCGGCTAACTCACGTCG 60.386 55.000 0.00 0.00 0.00 5.12
3274 3640 1.058404 GTTGTCGGCTAACTCACGTC 58.942 55.000 0.00 0.00 0.00 4.34
3275 3641 0.662374 CGTTGTCGGCTAACTCACGT 60.662 55.000 0.00 0.00 0.00 4.49
3276 3642 0.386352 TCGTTGTCGGCTAACTCACG 60.386 55.000 0.00 0.00 37.69 4.35
3277 3643 1.774639 TTCGTTGTCGGCTAACTCAC 58.225 50.000 0.00 0.00 37.69 3.51
3278 3644 2.333926 CATTCGTTGTCGGCTAACTCA 58.666 47.619 0.00 0.00 37.69 3.41
3279 3645 1.659098 CCATTCGTTGTCGGCTAACTC 59.341 52.381 0.00 0.00 37.69 3.01
3280 3646 1.674817 CCCATTCGTTGTCGGCTAACT 60.675 52.381 0.00 0.00 37.69 2.24
3281 3647 0.725117 CCCATTCGTTGTCGGCTAAC 59.275 55.000 0.00 0.00 37.69 2.34
3282 3648 0.391927 CCCCATTCGTTGTCGGCTAA 60.392 55.000 0.00 0.00 37.69 3.09
3283 3649 1.219664 CCCCATTCGTTGTCGGCTA 59.780 57.895 0.00 0.00 37.69 3.93
3284 3650 2.046314 CCCCATTCGTTGTCGGCT 60.046 61.111 0.00 0.00 37.69 5.52
3285 3651 1.238625 TTTCCCCATTCGTTGTCGGC 61.239 55.000 0.00 0.00 37.69 5.54
3286 3652 0.802494 CTTTCCCCATTCGTTGTCGG 59.198 55.000 0.00 0.00 37.69 4.79
3287 3653 1.803334 TCTTTCCCCATTCGTTGTCG 58.197 50.000 0.00 0.00 38.55 4.35
3288 3654 3.146847 AGTTCTTTCCCCATTCGTTGTC 58.853 45.455 0.00 0.00 0.00 3.18
3289 3655 3.223674 AGTTCTTTCCCCATTCGTTGT 57.776 42.857 0.00 0.00 0.00 3.32
3290 3656 3.305335 CCAAGTTCTTTCCCCATTCGTTG 60.305 47.826 0.00 0.00 0.00 4.10
3291 3657 2.890945 CCAAGTTCTTTCCCCATTCGTT 59.109 45.455 0.00 0.00 0.00 3.85
3292 3658 2.514803 CCAAGTTCTTTCCCCATTCGT 58.485 47.619 0.00 0.00 0.00 3.85
3293 3659 1.818674 CCCAAGTTCTTTCCCCATTCG 59.181 52.381 0.00 0.00 0.00 3.34
3294 3660 2.562738 CACCCAAGTTCTTTCCCCATTC 59.437 50.000 0.00 0.00 0.00 2.67
3295 3661 2.608623 CACCCAAGTTCTTTCCCCATT 58.391 47.619 0.00 0.00 0.00 3.16
3296 3662 1.827245 GCACCCAAGTTCTTTCCCCAT 60.827 52.381 0.00 0.00 0.00 4.00
3297 3663 0.469144 GCACCCAAGTTCTTTCCCCA 60.469 55.000 0.00 0.00 0.00 4.96
3335 3749 2.351111 GCAATTCTTCTTCCTCAGCTCG 59.649 50.000 0.00 0.00 0.00 5.03
3339 3753 4.186926 TCGATGCAATTCTTCTTCCTCAG 58.813 43.478 0.00 0.00 0.00 3.35
3361 3775 3.519913 GACAACTACTTCTTCCCCCTGAT 59.480 47.826 0.00 0.00 0.00 2.90
3388 3802 4.723309 ACAATCTTGAGTCCTTCAGCTTT 58.277 39.130 0.00 0.00 37.07 3.51
3398 3812 5.240891 TCAGTCCATTGACAATCTTGAGTC 58.759 41.667 0.00 0.00 44.33 3.36
3524 4124 7.286546 TGGACAAGGAAATCTCACAAAATAACA 59.713 33.333 0.00 0.00 0.00 2.41
3542 4142 2.754552 CACCACAACCATATGGACAAGG 59.245 50.000 28.77 23.05 39.46 3.61
3678 4294 6.998673 AGAACTTAGTTGGCTCAATGTAAGTT 59.001 34.615 21.86 21.86 42.19 2.66
3725 4342 4.069304 TCGACAGGGTTTTGAAGTAATGG 58.931 43.478 0.00 0.00 0.00 3.16
3774 4396 4.455877 GCAGCCTTACAAATTGTAGAGTGT 59.544 41.667 5.94 0.00 33.92 3.55
3979 5076 3.739519 GCTATCATGGGGCGAGCTAATAG 60.740 52.174 0.00 0.00 0.00 1.73
4083 5182 7.786178 TTAATCATCTACTTGTTTCCCATCG 57.214 36.000 0.00 0.00 0.00 3.84
4135 5236 2.346803 GACCGCATCAAAAGCAGAGTA 58.653 47.619 0.00 0.00 0.00 2.59
4170 5308 2.107366 TCTGGGATCATACAGAACGCA 58.893 47.619 10.44 0.00 40.51 5.24
4221 5368 4.820894 AACACCTAGTAACCTGTCATCC 57.179 45.455 0.00 0.00 0.00 3.51
4222 5369 6.276832 TGTAACACCTAGTAACCTGTCATC 57.723 41.667 0.00 0.00 0.00 2.92
4223 5370 6.675413 TTGTAACACCTAGTAACCTGTCAT 57.325 37.500 0.00 0.00 0.00 3.06
4224 5371 6.675413 ATTGTAACACCTAGTAACCTGTCA 57.325 37.500 0.00 0.00 0.00 3.58
4225 5372 7.658575 TCAAATTGTAACACCTAGTAACCTGTC 59.341 37.037 0.00 0.00 0.00 3.51
4226 5373 7.443272 GTCAAATTGTAACACCTAGTAACCTGT 59.557 37.037 0.00 0.00 0.00 4.00
4227 5374 7.359765 CGTCAAATTGTAACACCTAGTAACCTG 60.360 40.741 0.00 0.00 0.00 4.00
4236 5383 3.472652 TCAGCGTCAAATTGTAACACCT 58.527 40.909 0.00 0.00 0.00 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.