Multiple sequence alignment - TraesCS1D01G445100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G445100 chr1D 100.000 3299 0 0 1 3299 487948061 487951359 0.000000e+00 6093.0
1 TraesCS1D01G445100 chr1D 93.089 246 17 0 1057 1302 488545529 488545284 8.700000e-96 361.0
2 TraesCS1D01G445100 chr1D 80.819 537 35 43 797 1300 487910265 487910766 3.130000e-95 359.0
3 TraesCS1D01G445100 chr1D 88.889 108 7 2 564 671 488546018 488545916 9.610000e-26 128.0
4 TraesCS1D01G445100 chr1D 100.000 38 0 0 3190 3227 268535582 268535545 1.640000e-08 71.3
5 TraesCS1D01G445100 chr1B 90.794 1890 81 36 494 2350 679744533 679746362 0.000000e+00 2440.0
6 TraesCS1D01G445100 chr1B 90.962 520 28 9 2679 3191 679747107 679747614 0.000000e+00 682.0
7 TraesCS1D01G445100 chr1B 93.537 294 10 2 1 292 679744059 679744345 2.350000e-116 429.0
8 TraesCS1D01G445100 chr1B 91.870 246 20 0 1057 1302 681807586 681807831 8.760000e-91 344.0
9 TraesCS1D01G445100 chr1B 79.113 541 59 35 789 1300 679722660 679723175 1.140000e-84 324.0
10 TraesCS1D01G445100 chr1B 93.431 137 7 2 272 408 679744360 679744494 5.580000e-48 202.0
11 TraesCS1D01G445100 chr1B 96.825 63 2 0 3237 3299 679747613 679747675 4.500000e-19 106.0
12 TraesCS1D01G445100 chr1A 90.909 957 59 11 1417 2346 586950518 586951473 0.000000e+00 1260.0
13 TraesCS1D01G445100 chr1A 81.751 1222 91 47 351 1494 586949491 586950658 0.000000e+00 900.0
14 TraesCS1D01G445100 chr1A 90.541 518 31 7 2684 3195 586951939 586952444 0.000000e+00 669.0
15 TraesCS1D01G445100 chr1A 81.157 536 46 26 797 1300 586937396 586937908 2.400000e-101 379.0
16 TraesCS1D01G445100 chr7A 79.676 556 72 27 875 1402 676360729 676360187 2.420000e-96 363.0
17 TraesCS1D01G445100 chr7B 81.920 448 51 20 875 1299 656286682 656287122 5.240000e-93 351.0
18 TraesCS1D01G445100 chrUn 91.057 246 22 0 1057 1302 269772185 269771940 1.900000e-87 333.0
19 TraesCS1D01G445100 chrUn 91.057 246 22 0 1057 1302 269780558 269780313 1.900000e-87 333.0
20 TraesCS1D01G445100 chrUn 88.298 94 9 1 578 671 269772676 269772585 9.680000e-21 111.0
21 TraesCS1D01G445100 chrUn 88.298 94 9 1 578 671 269781049 269780958 9.680000e-21 111.0
22 TraesCS1D01G445100 chr7D 80.449 445 56 22 875 1297 585666802 585667237 8.890000e-81 311.0
23 TraesCS1D01G445100 chr6B 76.216 185 26 10 2701 2884 659654493 659654326 7.590000e-12 82.4
24 TraesCS1D01G445100 chr4D 97.674 43 1 0 3183 3225 337412410 337412368 1.270000e-09 75.0
25 TraesCS1D01G445100 chr5D 93.878 49 2 1 3179 3227 416428017 416427970 4.570000e-09 73.1
26 TraesCS1D01G445100 chr4B 95.652 46 1 1 3182 3227 611425202 611425158 4.570000e-09 73.1
27 TraesCS1D01G445100 chr3A 100.000 39 0 0 3189 3227 493714942 493714904 4.570000e-09 73.1
28 TraesCS1D01G445100 chr2B 93.617 47 3 0 3190 3236 667821822 667821776 1.640000e-08 71.3
29 TraesCS1D01G445100 chr2B 93.333 45 3 0 3180 3224 719529811 719529855 2.120000e-07 67.6
30 TraesCS1D01G445100 chr4A 92.000 50 3 1 3190 3238 567482774 567482823 5.910000e-08 69.4
31 TraesCS1D01G445100 chr3D 95.349 43 1 1 3182 3224 186608534 186608575 2.120000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G445100 chr1D 487948061 487951359 3298 False 6093.0 6093 100.000000 1 3299 1 chr1D.!!$F2 3298
1 TraesCS1D01G445100 chr1D 487910265 487910766 501 False 359.0 359 80.819000 797 1300 1 chr1D.!!$F1 503
2 TraesCS1D01G445100 chr1D 488545284 488546018 734 True 244.5 361 90.989000 564 1302 2 chr1D.!!$R2 738
3 TraesCS1D01G445100 chr1B 679744059 679747675 3616 False 771.8 2440 93.109800 1 3299 5 chr1B.!!$F3 3298
4 TraesCS1D01G445100 chr1B 679722660 679723175 515 False 324.0 324 79.113000 789 1300 1 chr1B.!!$F1 511
5 TraesCS1D01G445100 chr1A 586949491 586952444 2953 False 943.0 1260 87.733667 351 3195 3 chr1A.!!$F2 2844
6 TraesCS1D01G445100 chr1A 586937396 586937908 512 False 379.0 379 81.157000 797 1300 1 chr1A.!!$F1 503
7 TraesCS1D01G445100 chr7A 676360187 676360729 542 True 363.0 363 79.676000 875 1402 1 chr7A.!!$R1 527
8 TraesCS1D01G445100 chrUn 269771940 269772676 736 True 222.0 333 89.677500 578 1302 2 chrUn.!!$R1 724
9 TraesCS1D01G445100 chrUn 269780313 269781049 736 True 222.0 333 89.677500 578 1302 2 chrUn.!!$R2 724

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
607 669 1.135888 CACGATGACATGCACACCAAG 60.136 52.381 0.0 0.0 0.0 3.61 F
827 966 1.548269 CTTCCACCTCTCTCCTCACAC 59.452 57.143 0.0 0.0 0.0 3.82 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1451 1726 0.622665 CTCCCTGGGCATCTTCTTGT 59.377 55.0 8.22 0.0 0.0 3.16 R
2661 3619 0.395036 CAGTGTGTGTGGGGGTGAAA 60.395 55.0 0.00 0.0 0.0 2.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
56 57 4.399618 CCATACGGTATCTGGAATCTCGAT 59.600 45.833 2.24 0.00 31.38 3.59
60 61 2.354203 GGTATCTGGAATCTCGATGCCC 60.354 54.545 1.45 0.00 35.51 5.36
95 98 5.665381 TTTTTGCATCCGAAATCCAAAAC 57.335 34.783 0.00 0.00 35.76 2.43
114 117 1.271597 ACCTTGGGTGCTGTTCTCATC 60.272 52.381 0.00 0.00 32.98 2.92
126 129 4.256110 CTGTTCTCATCCACTTGTGCATA 58.744 43.478 0.00 0.00 0.00 3.14
144 147 3.369756 GCATACGATCGAGTTGGTTTGAA 59.630 43.478 24.34 0.00 0.00 2.69
196 199 4.771590 TTGTTGAATGAAGCTCCATGTC 57.228 40.909 0.00 0.00 0.00 3.06
250 253 9.744468 TTTTCTTTGTTTTTAAGATAGCTCACC 57.256 29.630 0.00 0.00 32.09 4.02
251 254 8.458573 TTCTTTGTTTTTAAGATAGCTCACCA 57.541 30.769 0.00 0.00 32.09 4.17
252 255 8.099364 TCTTTGTTTTTAAGATAGCTCACCAG 57.901 34.615 0.00 0.00 0.00 4.00
325 363 2.474410 AAAATCTCGCGAGGAACCTT 57.526 45.000 33.98 17.72 0.00 3.50
336 374 3.056821 GCGAGGAACCTTGCCTTTATTTT 60.057 43.478 19.25 0.00 45.28 1.82
339 377 5.508994 CGAGGAACCTTGCCTTTATTTTGTT 60.509 40.000 0.00 0.00 35.44 2.83
345 383 4.996758 CCTTGCCTTTATTTTGTTTGGAGG 59.003 41.667 0.00 0.00 0.00 4.30
429 468 8.462589 AAAATACCAAAAATTGTGCCAGAATT 57.537 26.923 0.00 0.00 0.00 2.17
433 472 7.495135 ACCAAAAATTGTGCCAGAATTTAAG 57.505 32.000 12.33 8.32 32.94 1.85
445 484 9.691362 GTGCCAGAATTTAAGATTTTAAGTGAA 57.309 29.630 0.00 0.00 30.84 3.18
457 496 8.738645 AGATTTTAAGTGAAGAACTGAACACT 57.261 30.769 0.00 0.00 43.92 3.55
541 596 3.098636 GCGAATTTTGATCCAGTTACGC 58.901 45.455 0.00 0.00 36.06 4.42
607 669 1.135888 CACGATGACATGCACACCAAG 60.136 52.381 0.00 0.00 0.00 3.61
731 820 3.733443 CATGACTCCATGGATGTACGA 57.267 47.619 16.63 4.18 44.88 3.43
732 821 4.058721 CATGACTCCATGGATGTACGAA 57.941 45.455 16.63 3.52 44.88 3.85
733 822 3.801114 TGACTCCATGGATGTACGAAG 57.199 47.619 16.63 3.11 0.00 3.79
734 823 2.159099 TGACTCCATGGATGTACGAAGC 60.159 50.000 16.63 3.66 0.00 3.86
735 824 2.101582 GACTCCATGGATGTACGAAGCT 59.898 50.000 16.63 0.00 0.00 3.74
736 825 3.296854 ACTCCATGGATGTACGAAGCTA 58.703 45.455 16.63 0.00 0.00 3.32
737 826 3.319405 ACTCCATGGATGTACGAAGCTAG 59.681 47.826 16.63 0.70 0.00 3.42
738 827 3.296854 TCCATGGATGTACGAAGCTAGT 58.703 45.455 11.44 0.00 0.00 2.57
739 828 4.466827 TCCATGGATGTACGAAGCTAGTA 58.533 43.478 11.44 0.00 0.00 1.82
740 829 4.277672 TCCATGGATGTACGAAGCTAGTAC 59.722 45.833 11.44 19.64 43.34 2.73
741 830 4.278669 CCATGGATGTACGAAGCTAGTACT 59.721 45.833 23.99 0.00 43.41 2.73
742 831 5.472478 CCATGGATGTACGAAGCTAGTACTA 59.528 44.000 23.99 15.24 43.41 1.82
778 885 6.869206 ATTAAGCTACACTTCTTCCTACCA 57.131 37.500 0.00 0.00 39.97 3.25
827 966 1.548269 CTTCCACCTCTCTCCTCACAC 59.452 57.143 0.00 0.00 0.00 3.82
851 992 2.969443 AGCTTCGAATCAACCAAACG 57.031 45.000 0.00 0.00 0.00 3.60
895 1054 2.741759 ATATACACGGCGCATCATGA 57.258 45.000 10.83 0.00 0.00 3.07
1113 1346 2.986979 TACGTGCTCCGCCTCACA 60.987 61.111 0.00 0.00 41.42 3.58
1349 1621 4.452795 GGAAGTCAAGAAGAGTAAACCTGC 59.547 45.833 0.00 0.00 0.00 4.85
1353 1625 2.481289 AGAAGAGTAAACCTGCTGCC 57.519 50.000 0.00 0.00 0.00 4.85
1451 1726 3.733960 CACAGAGGTCGACGGCGA 61.734 66.667 10.67 10.67 45.71 5.54
1704 1994 4.443266 AAGGAGAGCACGCTCGGC 62.443 66.667 13.12 9.43 46.90 5.54
1809 2099 1.351153 CGGCGAAGAAGGAAGAAGAC 58.649 55.000 0.00 0.00 0.00 3.01
1863 2153 4.373116 GCGACACCGGAGAAGCCA 62.373 66.667 9.46 0.00 35.94 4.75
1925 2215 3.635510 GGTTGATCCGGAGAGCCT 58.364 61.111 11.34 0.00 0.00 4.58
1926 2216 1.144936 GGTTGATCCGGAGAGCCTG 59.855 63.158 11.34 0.00 0.00 4.85
1927 2217 1.144936 GTTGATCCGGAGAGCCTGG 59.855 63.158 11.34 0.00 0.00 4.45
1928 2218 1.306141 TTGATCCGGAGAGCCTGGT 60.306 57.895 11.34 0.00 32.11 4.00
2007 2309 2.365582 GCCATAGAAGGAAAAGCGGAA 58.634 47.619 0.00 0.00 0.00 4.30
2008 2310 2.752903 GCCATAGAAGGAAAAGCGGAAA 59.247 45.455 0.00 0.00 0.00 3.13
2080 2382 3.011517 GGGAGCTCAAGGGGCTGA 61.012 66.667 17.19 0.00 40.40 4.26
2143 2445 2.391724 GAACAAGGAGGTGGTCGCCA 62.392 60.000 3.23 0.00 37.84 5.69
2206 2508 1.696336 AGCTCTTCAGGAAGTGAGCAA 59.304 47.619 19.24 0.00 39.40 3.91
2209 2511 3.470709 CTCTTCAGGAAGTGAGCAACAA 58.529 45.455 8.75 0.00 39.38 2.83
2267 2597 5.919755 TGTACTGAACACAAGGAACATGTA 58.080 37.500 0.00 0.00 38.63 2.29
2335 2667 2.490509 TGGCTGAAGATTGATGTGCAAG 59.509 45.455 0.00 0.00 40.42 4.01
2339 2671 5.241064 GGCTGAAGATTGATGTGCAAGATAT 59.759 40.000 0.00 0.00 40.42 1.63
2340 2672 6.429078 GGCTGAAGATTGATGTGCAAGATATA 59.571 38.462 0.00 0.00 40.42 0.86
2341 2673 7.296660 GCTGAAGATTGATGTGCAAGATATAC 58.703 38.462 0.00 0.00 40.42 1.47
2342 2674 7.572724 GCTGAAGATTGATGTGCAAGATATACC 60.573 40.741 0.00 0.00 40.42 2.73
2343 2675 7.512130 TGAAGATTGATGTGCAAGATATACCT 58.488 34.615 0.00 0.00 40.42 3.08
2344 2676 7.994911 TGAAGATTGATGTGCAAGATATACCTT 59.005 33.333 0.00 0.00 40.42 3.50
2345 2677 7.976135 AGATTGATGTGCAAGATATACCTTC 57.024 36.000 0.00 0.00 40.42 3.46
2346 2678 7.512130 AGATTGATGTGCAAGATATACCTTCA 58.488 34.615 0.00 0.00 40.42 3.02
2347 2679 7.660617 AGATTGATGTGCAAGATATACCTTCAG 59.339 37.037 0.00 0.00 40.42 3.02
2348 2680 6.239217 TGATGTGCAAGATATACCTTCAGT 57.761 37.500 0.00 0.00 0.00 3.41
2349 2681 6.653020 TGATGTGCAAGATATACCTTCAGTT 58.347 36.000 0.00 0.00 0.00 3.16
2350 2682 7.791029 TGATGTGCAAGATATACCTTCAGTTA 58.209 34.615 0.00 0.00 0.00 2.24
2351 2683 8.432013 TGATGTGCAAGATATACCTTCAGTTAT 58.568 33.333 0.00 0.00 0.00 1.89
2352 2684 9.277783 GATGTGCAAGATATACCTTCAGTTATT 57.722 33.333 0.00 0.00 0.00 1.40
2353 2685 9.632638 ATGTGCAAGATATACCTTCAGTTATTT 57.367 29.630 0.00 0.00 0.00 1.40
2354 2686 9.461312 TGTGCAAGATATACCTTCAGTTATTTT 57.539 29.630 0.00 0.00 0.00 1.82
2355 2687 9.937175 GTGCAAGATATACCTTCAGTTATTTTC 57.063 33.333 0.00 0.00 0.00 2.29
2356 2688 9.679661 TGCAAGATATACCTTCAGTTATTTTCA 57.320 29.630 0.00 0.00 0.00 2.69
2398 2730 3.458487 ACACCTTCAGTTTGTTCTAGGGT 59.542 43.478 0.00 0.00 0.00 4.34
2450 3205 6.257630 GTGGTGCTTTTATTCACACACAAAAT 59.742 34.615 0.00 0.00 35.94 1.82
2451 3206 7.436673 GTGGTGCTTTTATTCACACACAAAATA 59.563 33.333 0.00 0.00 35.94 1.40
2484 3239 5.447279 CGGTAAATAGTGTGTTTCTCATGGC 60.447 44.000 0.00 0.00 0.00 4.40
2492 3247 4.398988 GTGTGTTTCTCATGGCCATGAATA 59.601 41.667 40.23 30.45 46.10 1.75
2493 3248 5.068198 GTGTGTTTCTCATGGCCATGAATAT 59.932 40.000 40.23 9.35 46.10 1.28
2515 3270 0.457851 CTTCTCCAGCCGAGTACCAG 59.542 60.000 0.00 0.00 39.84 4.00
2523 3278 1.418637 AGCCGAGTACCAGGTTTTCAA 59.581 47.619 0.00 0.00 0.00 2.69
2528 3283 4.024302 CCGAGTACCAGGTTTTCAAAAGTC 60.024 45.833 0.00 0.00 0.00 3.01
2532 3287 4.450082 ACCAGGTTTTCAAAAGTCACAC 57.550 40.909 0.00 0.00 0.00 3.82
2533 3288 3.829601 ACCAGGTTTTCAAAAGTCACACA 59.170 39.130 0.00 0.00 0.00 3.72
2534 3289 4.173256 CCAGGTTTTCAAAAGTCACACAC 58.827 43.478 0.00 0.00 0.00 3.82
2537 3292 5.345741 CAGGTTTTCAAAAGTCACACACTTG 59.654 40.000 0.00 0.00 45.32 3.16
2538 3293 4.625311 GGTTTTCAAAAGTCACACACTTGG 59.375 41.667 0.00 0.00 45.32 3.61
2539 3294 5.465935 GTTTTCAAAAGTCACACACTTGGA 58.534 37.500 0.00 0.00 45.32 3.53
2544 3299 5.652014 TCAAAAGTCACACACTTGGAGAAAT 59.348 36.000 0.00 0.00 45.32 2.17
2546 3301 7.338196 TCAAAAGTCACACACTTGGAGAAATTA 59.662 33.333 0.00 0.00 45.32 1.40
2553 3312 8.134895 TCACACACTTGGAGAAATTAAATTCAC 58.865 33.333 6.07 0.00 0.00 3.18
2554 3313 7.382218 CACACACTTGGAGAAATTAAATTCACC 59.618 37.037 11.58 11.58 39.60 4.02
2570 3329 3.788227 TCACCTGGTTGAACTAAGCAT 57.212 42.857 0.00 0.00 44.95 3.79
2590 3349 4.621747 GCATGGTCGGAGGATATCTAAAGG 60.622 50.000 2.05 0.00 0.00 3.11
2592 3351 4.150359 TGGTCGGAGGATATCTAAAGGTC 58.850 47.826 2.05 0.00 0.00 3.85
2598 3357 5.163237 CGGAGGATATCTAAAGGTCCCAAAA 60.163 44.000 2.05 0.00 0.00 2.44
2601 3360 8.445588 GGAGGATATCTAAAGGTCCCAAAATTA 58.554 37.037 2.05 0.00 0.00 1.40
2602 3361 9.862149 GAGGATATCTAAAGGTCCCAAAATTAA 57.138 33.333 2.05 0.00 0.00 1.40
2609 3368 8.811994 TCTAAAGGTCCCAAAATTAAATTCCTG 58.188 33.333 0.00 0.00 0.00 3.86
2612 3371 5.187772 AGGTCCCAAAATTAAATTCCTGCTC 59.812 40.000 0.00 0.00 0.00 4.26
2627 3585 0.902531 TGCTCTTTTCTAGGGGACGG 59.097 55.000 0.00 0.00 0.00 4.79
2633 3591 3.391955 TCTTTTCTAGGGGACGGAAACAA 59.608 43.478 0.00 0.00 36.94 2.83
2662 3620 9.859427 CAACTGTTATATGTTGTCATCCAAATT 57.141 29.630 0.00 0.00 38.81 1.82
2666 3624 9.853555 TGTTATATGTTGTCATCCAAATTTCAC 57.146 29.630 0.00 0.00 34.07 3.18
2667 3625 9.301153 GTTATATGTTGTCATCCAAATTTCACC 57.699 33.333 0.00 0.00 34.07 4.02
2690 3697 4.141733 CCCCACACACACTGATATACATCA 60.142 45.833 0.00 0.00 38.90 3.07
2718 3730 5.410746 GCATATGGATGATACCTTCACACAG 59.589 44.000 4.56 0.00 37.11 3.66
2741 3753 6.980397 CAGTTCAATTAAGTTTCCAACTGCTT 59.020 34.615 0.00 0.00 41.91 3.91
2759 3771 2.148768 CTTGGTCCCAAAAGGTACGAC 58.851 52.381 0.00 0.00 35.33 4.34
2760 3772 0.033781 TGGTCCCAAAAGGTACGACG 59.966 55.000 0.00 0.00 36.75 5.12
2761 3773 0.318120 GGTCCCAAAAGGTACGACGA 59.682 55.000 0.00 0.00 36.75 4.20
2772 3784 3.015327 AGGTACGACGAAATGCTAGTCT 58.985 45.455 0.00 0.00 33.10 3.24
2773 3785 3.106672 GGTACGACGAAATGCTAGTCTG 58.893 50.000 0.00 0.00 33.10 3.51
2774 3786 3.181503 GGTACGACGAAATGCTAGTCTGA 60.182 47.826 0.00 0.00 33.10 3.27
2775 3787 3.138205 ACGACGAAATGCTAGTCTGAG 57.862 47.619 0.00 0.00 33.10 3.35
2838 3850 8.449397 TGTTTTCAAACTTCCATGTGAATTTTG 58.551 29.630 20.94 20.94 46.73 2.44
2960 3972 3.081804 GCAAGCCTGGTAGTACAACAAT 58.918 45.455 2.06 0.00 0.00 2.71
2970 3982 7.858879 CCTGGTAGTACAACAATTGTTTACAAC 59.141 37.037 26.96 20.14 42.22 3.32
2971 3983 8.277490 TGGTAGTACAACAATTGTTTACAACA 57.723 30.769 26.96 21.84 42.22 3.33
2972 3984 8.399425 TGGTAGTACAACAATTGTTTACAACAG 58.601 33.333 26.96 17.32 42.22 3.16
3096 4110 2.878406 CACCTTCGACCTGAAACATTGT 59.122 45.455 0.00 0.00 35.79 2.71
3107 4121 6.981722 ACCTGAAACATTGTAAAGGAATGAC 58.018 36.000 15.54 0.00 35.23 3.06
3112 4126 8.298854 TGAAACATTGTAAAGGAATGACATCAG 58.701 33.333 0.00 0.00 35.23 2.90
3135 4149 0.259065 TGCAAAACCCAGGTACACCA 59.741 50.000 0.38 0.00 38.89 4.17
3191 4205 8.500773 GTCTGTAGTCTGTATCTAATCTGCTAC 58.499 40.741 0.00 0.00 0.00 3.58
3192 4206 8.433599 TCTGTAGTCTGTATCTAATCTGCTACT 58.566 37.037 0.00 0.00 0.00 2.57
3193 4207 8.610248 TGTAGTCTGTATCTAATCTGCTACTC 57.390 38.462 0.00 0.00 0.00 2.59
3194 4208 7.662258 TGTAGTCTGTATCTAATCTGCTACTCC 59.338 40.741 0.00 0.00 0.00 3.85
3195 4209 6.007703 AGTCTGTATCTAATCTGCTACTCCC 58.992 44.000 0.00 0.00 0.00 4.30
3196 4210 6.007703 GTCTGTATCTAATCTGCTACTCCCT 58.992 44.000 0.00 0.00 0.00 4.20
3197 4211 6.150474 GTCTGTATCTAATCTGCTACTCCCTC 59.850 46.154 0.00 0.00 0.00 4.30
3198 4212 5.326069 TGTATCTAATCTGCTACTCCCTCC 58.674 45.833 0.00 0.00 0.00 4.30
3199 4213 2.865079 TCTAATCTGCTACTCCCTCCG 58.135 52.381 0.00 0.00 0.00 4.63
3200 4214 2.175069 TCTAATCTGCTACTCCCTCCGT 59.825 50.000 0.00 0.00 0.00 4.69
3201 4215 1.404843 AATCTGCTACTCCCTCCGTC 58.595 55.000 0.00 0.00 0.00 4.79
3202 4216 0.468400 ATCTGCTACTCCCTCCGTCC 60.468 60.000 0.00 0.00 0.00 4.79
3203 4217 2.439701 TGCTACTCCCTCCGTCCG 60.440 66.667 0.00 0.00 0.00 4.79
3204 4218 2.124403 GCTACTCCCTCCGTCCGA 60.124 66.667 0.00 0.00 0.00 4.55
3205 4219 1.751927 GCTACTCCCTCCGTCCGAA 60.752 63.158 0.00 0.00 0.00 4.30
3206 4220 1.318158 GCTACTCCCTCCGTCCGAAA 61.318 60.000 0.00 0.00 0.00 3.46
3207 4221 1.180029 CTACTCCCTCCGTCCGAAAA 58.820 55.000 0.00 0.00 0.00 2.29
3208 4222 1.547372 CTACTCCCTCCGTCCGAAAAA 59.453 52.381 0.00 0.00 0.00 1.94
3231 4245 3.460648 GTCCCTCAAATGGACGGAG 57.539 57.895 0.00 0.00 42.63 4.63
3232 4246 0.107654 GTCCCTCAAATGGACGGAGG 60.108 60.000 0.00 0.00 46.24 4.30
3233 4247 4.963878 CCTCAAATGGACGGAGGG 57.036 61.111 0.00 0.00 43.59 4.30
3234 4248 2.296920 CCTCAAATGGACGGAGGGA 58.703 57.895 0.00 0.00 43.59 4.20
3235 4249 0.179000 CCTCAAATGGACGGAGGGAG 59.821 60.000 0.00 0.00 43.59 4.30
3236 4250 0.905357 CTCAAATGGACGGAGGGAGT 59.095 55.000 0.00 0.00 0.00 3.85
3237 4251 2.108168 CTCAAATGGACGGAGGGAGTA 58.892 52.381 0.00 0.00 0.00 2.59
3253 4267 7.914346 CGGAGGGAGTATTCGATAATTATGTAC 59.086 40.741 1.78 1.60 0.00 2.90
3261 4275 6.488769 TTCGATAATTATGTACCACCCAGT 57.511 37.500 1.78 0.00 0.00 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 2.029828 GCATCGAGATTCCAGATACCGT 60.030 50.000 0.00 0.00 0.00 4.83
95 98 1.457346 GATGAGAACAGCACCCAAGG 58.543 55.000 0.00 0.00 32.22 3.61
114 117 1.854743 CTCGATCGTATGCACAAGTGG 59.145 52.381 15.94 0.00 0.00 4.00
126 129 5.432885 AAAATTCAAACCAACTCGATCGT 57.567 34.783 15.94 0.00 0.00 3.73
196 199 2.349755 TTCCCCGCGAAGAAAGGG 59.650 61.111 8.23 8.93 44.67 3.95
238 241 2.234908 GTGGTGACTGGTGAGCTATCTT 59.765 50.000 0.00 0.00 0.00 2.40
246 249 0.850100 AATTGGGTGGTGACTGGTGA 59.150 50.000 0.00 0.00 0.00 4.02
247 250 1.703411 AAATTGGGTGGTGACTGGTG 58.297 50.000 0.00 0.00 0.00 4.17
248 251 2.316108 GAAAATTGGGTGGTGACTGGT 58.684 47.619 0.00 0.00 0.00 4.00
249 252 1.618343 GGAAAATTGGGTGGTGACTGG 59.382 52.381 0.00 0.00 0.00 4.00
250 253 2.597455 AGGAAAATTGGGTGGTGACTG 58.403 47.619 0.00 0.00 0.00 3.51
251 254 4.105697 TCTTAGGAAAATTGGGTGGTGACT 59.894 41.667 0.00 0.00 0.00 3.41
252 255 4.403734 TCTTAGGAAAATTGGGTGGTGAC 58.596 43.478 0.00 0.00 0.00 3.67
296 334 4.094294 CCTCGCGAGATTTTTGGAAACATA 59.906 41.667 36.59 0.00 39.36 2.29
325 363 5.622346 AACCTCCAAACAAAATAAAGGCA 57.378 34.783 0.00 0.00 0.00 4.75
356 394 3.119849 GCATAAAGATGGTGTCGCACTTT 60.120 43.478 9.31 0.00 34.40 2.66
408 446 8.424918 TCTTAAATTCTGGCACAATTTTTGGTA 58.575 29.630 16.76 0.00 38.70 3.25
410 448 7.727331 TCTTAAATTCTGGCACAATTTTTGG 57.273 32.000 16.76 8.99 38.70 3.28
419 458 9.691362 TTCACTTAAAATCTTAAATTCTGGCAC 57.309 29.630 0.00 0.00 0.00 5.01
433 472 8.831550 AGAGTGTTCAGTTCTTCACTTAAAATC 58.168 33.333 0.00 0.00 40.53 2.17
437 476 6.873997 TCAGAGTGTTCAGTTCTTCACTTAA 58.126 36.000 0.00 0.00 40.53 1.85
445 484 3.381908 ACGACTTCAGAGTGTTCAGTTCT 59.618 43.478 0.00 0.00 35.88 3.01
448 487 2.799917 GCACGACTTCAGAGTGTTCAGT 60.800 50.000 0.00 0.00 35.88 3.41
449 488 1.789464 GCACGACTTCAGAGTGTTCAG 59.211 52.381 0.00 0.00 35.88 3.02
450 489 1.538204 GGCACGACTTCAGAGTGTTCA 60.538 52.381 0.00 0.00 35.88 3.18
451 490 1.140816 GGCACGACTTCAGAGTGTTC 58.859 55.000 0.00 1.01 35.88 3.18
452 491 0.464036 TGGCACGACTTCAGAGTGTT 59.536 50.000 0.00 0.00 35.88 3.32
453 492 0.249489 GTGGCACGACTTCAGAGTGT 60.249 55.000 0.00 0.00 35.88 3.55
454 493 0.946221 GGTGGCACGACTTCAGAGTG 60.946 60.000 12.17 3.82 35.88 3.51
456 495 0.036952 ATGGTGGCACGACTTCAGAG 60.037 55.000 12.17 0.00 0.00 3.35
457 496 0.396435 AATGGTGGCACGACTTCAGA 59.604 50.000 12.17 0.00 0.00 3.27
607 669 2.029649 TGAAGAAGGAATGCTTGCTTGC 60.030 45.455 7.24 0.00 41.66 4.01
753 842 8.370266 TGGTAGGAAGAAGTGTAGCTTAATTA 57.630 34.615 0.00 0.00 37.59 1.40
754 843 7.253905 TGGTAGGAAGAAGTGTAGCTTAATT 57.746 36.000 0.00 0.00 37.59 1.40
755 844 6.869206 TGGTAGGAAGAAGTGTAGCTTAAT 57.131 37.500 0.00 0.00 37.59 1.40
756 845 6.042322 TGTTGGTAGGAAGAAGTGTAGCTTAA 59.958 38.462 0.00 0.00 37.59 1.85
778 885 1.024271 GCCATGGATGCATACGTGTT 58.976 50.000 26.04 0.00 0.00 3.32
827 966 1.879380 TGGTTGATTCGAAGCTTGGTG 59.121 47.619 15.31 0.00 0.00 4.17
895 1054 3.960102 GAGAGATGAGATGAGAAGGGTGT 59.040 47.826 0.00 0.00 0.00 4.16
1054 1275 2.874664 CGAACTTGGGGTCCACCGA 61.875 63.158 0.00 0.00 41.60 4.69
1113 1346 0.035458 CCTTCTTGAAGCCCGTCAGT 59.965 55.000 4.94 0.00 0.00 3.41
1349 1621 2.959484 TTCTCCTCCTTGGCGGCAG 61.959 63.158 12.87 6.61 35.26 4.85
1353 1625 2.815647 GCGTTCTCCTCCTTGGCG 60.816 66.667 0.00 0.00 35.26 5.69
1432 1707 4.436998 GCCGTCGACCTCTGTGGG 62.437 72.222 10.58 4.43 41.11 4.61
1451 1726 0.622665 CTCCCTGGGCATCTTCTTGT 59.377 55.000 8.22 0.00 0.00 3.16
1500 1781 4.467084 TTGGCGCCATCGACCTCC 62.467 66.667 33.25 0.00 44.89 4.30
1846 2136 4.373116 TGGCTTCTCCGGTGTCGC 62.373 66.667 0.00 6.30 37.80 5.19
1914 2204 3.965026 CTCCACCAGGCTCTCCGGA 62.965 68.421 2.93 2.93 37.47 5.14
1917 2207 2.716017 CGTCTCCACCAGGCTCTCC 61.716 68.421 0.00 0.00 33.74 3.71
1918 2208 1.679305 TCGTCTCCACCAGGCTCTC 60.679 63.158 0.00 0.00 33.74 3.20
1919 2209 1.979693 GTCGTCTCCACCAGGCTCT 60.980 63.158 0.00 0.00 33.74 4.09
1920 2210 2.574399 GTCGTCTCCACCAGGCTC 59.426 66.667 0.00 0.00 33.74 4.70
1921 2211 3.374402 CGTCGTCTCCACCAGGCT 61.374 66.667 0.00 0.00 33.74 4.58
1922 2212 3.343788 CTCGTCGTCTCCACCAGGC 62.344 68.421 0.00 0.00 33.74 4.85
1923 2213 2.701780 CCTCGTCGTCTCCACCAGG 61.702 68.421 0.00 0.00 0.00 4.45
1924 2214 2.878429 CCTCGTCGTCTCCACCAG 59.122 66.667 0.00 0.00 0.00 4.00
1925 2215 3.371063 GCCTCGTCGTCTCCACCA 61.371 66.667 0.00 0.00 0.00 4.17
1926 2216 4.477975 CGCCTCGTCGTCTCCACC 62.478 72.222 0.00 0.00 0.00 4.61
1927 2217 4.477975 CCGCCTCGTCGTCTCCAC 62.478 72.222 0.00 0.00 0.00 4.02
1951 2253 1.857638 GCCTTGGCCCTCTCTTCCTT 61.858 60.000 0.00 0.00 0.00 3.36
1997 2299 1.265905 TCTTCGCCTTTTCCGCTTTTC 59.734 47.619 0.00 0.00 0.00 2.29
2007 2309 1.966451 CACCGCCTTCTTCGCCTTT 60.966 57.895 0.00 0.00 0.00 3.11
2008 2310 2.358737 CACCGCCTTCTTCGCCTT 60.359 61.111 0.00 0.00 0.00 4.35
2080 2382 2.047274 CGCCCACTTCATGTCCGT 60.047 61.111 0.00 0.00 0.00 4.69
2224 2530 2.389962 TATTTACCCACTGTCCGTGC 57.610 50.000 0.00 0.00 42.42 5.34
2267 2597 7.862372 CACACTTTACTTGCACACATATCTTTT 59.138 33.333 0.00 0.00 0.00 2.27
2364 2696 9.665719 ACAAACTGAAGGTGTTTTTCATTTTAT 57.334 25.926 3.92 0.00 36.13 1.40
2365 2697 9.495572 AACAAACTGAAGGTGTTTTTCATTTTA 57.504 25.926 3.92 0.00 36.13 1.52
2366 2698 7.977789 ACAAACTGAAGGTGTTTTTCATTTT 57.022 28.000 0.00 0.00 37.68 1.82
2367 2699 7.877612 AGAACAAACTGAAGGTGTTTTTCATTT 59.122 29.630 0.44 0.00 35.67 2.32
2368 2700 7.386059 AGAACAAACTGAAGGTGTTTTTCATT 58.614 30.769 0.44 0.00 35.67 2.57
2369 2701 6.935167 AGAACAAACTGAAGGTGTTTTTCAT 58.065 32.000 0.44 0.00 35.67 2.57
2370 2702 6.339587 AGAACAAACTGAAGGTGTTTTTCA 57.660 33.333 0.44 0.00 35.67 2.69
2371 2703 6.972901 CCTAGAACAAACTGAAGGTGTTTTTC 59.027 38.462 0.00 0.00 35.67 2.29
2372 2704 6.127451 CCCTAGAACAAACTGAAGGTGTTTTT 60.127 38.462 0.00 0.00 35.67 1.94
2373 2705 5.359860 CCCTAGAACAAACTGAAGGTGTTTT 59.640 40.000 0.00 1.98 35.67 2.43
2374 2706 4.887655 CCCTAGAACAAACTGAAGGTGTTT 59.112 41.667 0.00 0.00 35.67 2.83
2375 2707 4.079958 ACCCTAGAACAAACTGAAGGTGTT 60.080 41.667 0.00 2.37 38.17 3.32
2376 2708 3.458487 ACCCTAGAACAAACTGAAGGTGT 59.542 43.478 0.00 0.00 0.00 4.16
2406 3161 6.092670 GCACCACATATAAGCCTACACATATG 59.907 42.308 0.00 0.00 37.38 1.78
2407 3162 6.013379 AGCACCACATATAAGCCTACACATAT 60.013 38.462 0.00 0.00 0.00 1.78
2415 3170 6.833416 TGAATAAAAGCACCACATATAAGCCT 59.167 34.615 0.00 0.00 0.00 4.58
2417 3172 7.432252 GTGTGAATAAAAGCACCACATATAAGC 59.568 37.037 0.00 0.00 39.51 3.09
2418 3173 8.458052 TGTGTGAATAAAAGCACCACATATAAG 58.542 33.333 0.00 0.00 39.51 1.73
2419 3174 8.240682 GTGTGTGAATAAAAGCACCACATATAA 58.759 33.333 0.00 0.00 39.51 0.98
2420 3175 7.391833 TGTGTGTGAATAAAAGCACCACATATA 59.608 33.333 0.00 0.00 39.23 0.86
2421 3176 6.208402 TGTGTGTGAATAAAAGCACCACATAT 59.792 34.615 0.00 0.00 39.23 1.78
2515 3270 4.625311 CCAAGTGTGTGACTTTTGAAAACC 59.375 41.667 0.00 0.00 42.70 3.27
2523 3278 7.639113 TTAATTTCTCCAAGTGTGTGACTTT 57.361 32.000 0.00 0.00 42.70 2.66
2528 3283 7.382218 GGTGAATTTAATTTCTCCAAGTGTGTG 59.618 37.037 19.20 0.00 38.53 3.82
2532 3287 7.092716 CCAGGTGAATTTAATTTCTCCAAGTG 58.907 38.462 23.19 16.19 40.25 3.16
2533 3288 6.782494 ACCAGGTGAATTTAATTTCTCCAAGT 59.218 34.615 23.19 18.48 40.25 3.16
2534 3289 7.232118 ACCAGGTGAATTTAATTTCTCCAAG 57.768 36.000 23.19 18.06 40.25 3.61
2537 3292 7.227049 TCAACCAGGTGAATTTAATTTCTCC 57.773 36.000 17.52 17.52 38.81 3.71
2538 3293 8.360390 AGTTCAACCAGGTGAATTTAATTTCTC 58.640 33.333 0.73 7.39 39.61 2.87
2539 3294 8.250143 AGTTCAACCAGGTGAATTTAATTTCT 57.750 30.769 0.73 0.00 39.61 2.52
2544 3299 6.547880 TGCTTAGTTCAACCAGGTGAATTTAA 59.452 34.615 0.73 3.89 39.61 1.52
2546 3301 4.892934 TGCTTAGTTCAACCAGGTGAATTT 59.107 37.500 0.73 0.00 39.61 1.82
2553 3312 2.749621 GACCATGCTTAGTTCAACCAGG 59.250 50.000 0.00 0.00 0.00 4.45
2554 3313 2.416547 CGACCATGCTTAGTTCAACCAG 59.583 50.000 0.00 0.00 0.00 4.00
2570 3329 4.150359 GACCTTTAGATATCCTCCGACCA 58.850 47.826 0.00 0.00 0.00 4.02
2590 3349 6.286240 AGAGCAGGAATTTAATTTTGGGAC 57.714 37.500 0.00 0.00 0.00 4.46
2592 3351 7.879677 AGAAAAGAGCAGGAATTTAATTTTGGG 59.120 33.333 0.00 0.00 0.00 4.12
2598 3357 6.836007 CCCCTAGAAAAGAGCAGGAATTTAAT 59.164 38.462 0.00 0.00 0.00 1.40
2601 3360 4.292306 TCCCCTAGAAAAGAGCAGGAATTT 59.708 41.667 0.00 0.00 0.00 1.82
2602 3361 3.852578 TCCCCTAGAAAAGAGCAGGAATT 59.147 43.478 0.00 0.00 0.00 2.17
2605 3364 2.188817 GTCCCCTAGAAAAGAGCAGGA 58.811 52.381 0.00 0.00 0.00 3.86
2607 3366 1.134670 CCGTCCCCTAGAAAAGAGCAG 60.135 57.143 0.00 0.00 0.00 4.24
2609 3368 1.192428 TCCGTCCCCTAGAAAAGAGC 58.808 55.000 0.00 0.00 0.00 4.09
2612 3371 3.412237 TGTTTCCGTCCCCTAGAAAAG 57.588 47.619 0.00 0.00 31.71 2.27
2620 3578 2.486592 CAGTTGTATTGTTTCCGTCCCC 59.513 50.000 0.00 0.00 0.00 4.81
2656 3614 1.069978 GTGTGTGGGGGTGAAATTTGG 59.930 52.381 0.00 0.00 0.00 3.28
2659 3617 1.063266 AGTGTGTGTGGGGGTGAAATT 60.063 47.619 0.00 0.00 0.00 1.82
2661 3619 0.395036 CAGTGTGTGTGGGGGTGAAA 60.395 55.000 0.00 0.00 0.00 2.69
2662 3620 1.225983 CAGTGTGTGTGGGGGTGAA 59.774 57.895 0.00 0.00 0.00 3.18
2663 3621 1.059584 ATCAGTGTGTGTGGGGGTGA 61.060 55.000 0.00 0.00 0.00 4.02
2666 3624 2.503765 TGTATATCAGTGTGTGTGGGGG 59.496 50.000 0.00 0.00 0.00 5.40
2667 3625 3.904800 TGTATATCAGTGTGTGTGGGG 57.095 47.619 0.00 0.00 0.00 4.96
2690 3697 4.287845 TGAAGGTATCATCCATATGCTGCT 59.712 41.667 0.00 0.00 31.50 4.24
2759 3771 5.347342 AGATTCACTCAGACTAGCATTTCG 58.653 41.667 0.00 0.00 0.00 3.46
2760 3772 7.711846 TCTAGATTCACTCAGACTAGCATTTC 58.288 38.462 0.00 0.00 33.06 2.17
2761 3773 7.652524 TCTAGATTCACTCAGACTAGCATTT 57.347 36.000 0.00 0.00 33.06 2.32
2772 3784 7.445121 ACTGTCACATTTTCTAGATTCACTCA 58.555 34.615 0.00 0.00 0.00 3.41
2773 3785 7.816995 AGACTGTCACATTTTCTAGATTCACTC 59.183 37.037 10.88 0.00 0.00 3.51
2774 3786 7.601886 CAGACTGTCACATTTTCTAGATTCACT 59.398 37.037 10.88 0.00 0.00 3.41
2775 3787 7.600375 TCAGACTGTCACATTTTCTAGATTCAC 59.400 37.037 10.88 0.00 0.00 3.18
2838 3850 1.240256 TAAATGTGTGCCGGACAACC 58.760 50.000 5.05 0.00 35.91 3.77
2970 3982 0.040958 GCCTCTCGTTGTTGTTGCTG 60.041 55.000 0.00 0.00 0.00 4.41
2971 3983 0.463654 TGCCTCTCGTTGTTGTTGCT 60.464 50.000 0.00 0.00 0.00 3.91
2972 3984 0.380378 TTGCCTCTCGTTGTTGTTGC 59.620 50.000 0.00 0.00 0.00 4.17
3096 4110 3.633525 GCATGCCTGATGTCATTCCTTTA 59.366 43.478 6.36 0.00 34.14 1.85
3107 4121 0.609151 TGGGTTTTGCATGCCTGATG 59.391 50.000 16.68 0.00 34.84 3.07
3112 4126 0.246360 GTACCTGGGTTTTGCATGCC 59.754 55.000 16.68 0.00 0.00 4.40
3216 4230 0.179000 CTCCCTCCGTCCATTTGAGG 59.821 60.000 0.00 0.00 44.34 3.86
3217 4231 0.905357 ACTCCCTCCGTCCATTTGAG 59.095 55.000 0.00 0.00 0.00 3.02
3218 4232 2.241281 TACTCCCTCCGTCCATTTGA 57.759 50.000 0.00 0.00 0.00 2.69
3219 4233 3.467803 GAATACTCCCTCCGTCCATTTG 58.532 50.000 0.00 0.00 0.00 2.32
3220 4234 2.102588 CGAATACTCCCTCCGTCCATTT 59.897 50.000 0.00 0.00 0.00 2.32
3221 4235 1.687123 CGAATACTCCCTCCGTCCATT 59.313 52.381 0.00 0.00 0.00 3.16
3222 4236 1.133575 TCGAATACTCCCTCCGTCCAT 60.134 52.381 0.00 0.00 0.00 3.41
3223 4237 0.256752 TCGAATACTCCCTCCGTCCA 59.743 55.000 0.00 0.00 0.00 4.02
3224 4238 1.618487 ATCGAATACTCCCTCCGTCC 58.382 55.000 0.00 0.00 0.00 4.79
3225 4239 5.388408 AATTATCGAATACTCCCTCCGTC 57.612 43.478 0.00 0.00 0.00 4.79
3226 4240 6.436532 ACATAATTATCGAATACTCCCTCCGT 59.563 38.462 0.00 0.00 0.00 4.69
3227 4241 6.864342 ACATAATTATCGAATACTCCCTCCG 58.136 40.000 0.00 0.00 0.00 4.63
3228 4242 8.196103 GGTACATAATTATCGAATACTCCCTCC 58.804 40.741 0.00 0.00 0.00 4.30
3229 4243 8.746530 TGGTACATAATTATCGAATACTCCCTC 58.253 37.037 0.00 0.00 0.00 4.30
3230 4244 8.529476 GTGGTACATAATTATCGAATACTCCCT 58.471 37.037 0.00 0.00 44.52 4.20
3231 4245 7.763071 GGTGGTACATAATTATCGAATACTCCC 59.237 40.741 0.00 0.00 44.52 4.30
3232 4246 7.763071 GGGTGGTACATAATTATCGAATACTCC 59.237 40.741 0.00 4.42 44.52 3.85
3233 4247 8.308931 TGGGTGGTACATAATTATCGAATACTC 58.691 37.037 0.00 0.00 44.52 2.59
3234 4248 8.197592 TGGGTGGTACATAATTATCGAATACT 57.802 34.615 0.00 0.00 44.52 2.12
3235 4249 8.092687 ACTGGGTGGTACATAATTATCGAATAC 58.907 37.037 0.00 0.00 44.52 1.89
3236 4250 8.197592 ACTGGGTGGTACATAATTATCGAATA 57.802 34.615 0.00 0.00 44.52 1.75
3237 4251 7.074653 ACTGGGTGGTACATAATTATCGAAT 57.925 36.000 0.00 0.00 44.52 3.34
3253 4267 3.426787 TTACATGGTGTAACTGGGTGG 57.573 47.619 0.00 0.00 37.86 4.61
3261 4275 7.994425 AATGACTGTCATTTACATGGTGTAA 57.006 32.000 26.03 0.00 44.03 2.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.