Multiple sequence alignment - TraesCS1D01G444000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G444000 chr1D 100.000 5285 0 0 1 5285 487543924 487549208 0.000000e+00 9760.0
1 TraesCS1D01G444000 chr1D 89.362 47 3 2 4774 4818 489245823 489245777 2.060000e-04 58.4
2 TraesCS1D01G444000 chrUn 93.146 2203 116 10 852 3021 329494420 329496620 0.000000e+00 3199.0
3 TraesCS1D01G444000 chrUn 87.419 310 23 6 3913 4215 273923532 273923832 5.070000e-90 342.0
4 TraesCS1D01G444000 chrUn 93.578 218 13 1 3698 3914 329496632 329496849 1.840000e-84 324.0
5 TraesCS1D01G444000 chrUn 95.588 136 5 1 4513 4648 293173755 293173889 3.210000e-52 217.0
6 TraesCS1D01G444000 chrUn 95.588 136 5 1 4513 4648 295229346 295229212 3.210000e-52 217.0
7 TraesCS1D01G444000 chrUn 95.588 136 5 1 4513 4648 301983917 301984051 3.210000e-52 217.0
8 TraesCS1D01G444000 chrUn 95.238 126 6 0 1 126 302760988 302761113 3.230000e-47 200.0
9 TraesCS1D01G444000 chrUn 89.437 142 8 3 4290 4430 293173592 293173727 7.040000e-39 172.0
10 TraesCS1D01G444000 chrUn 89.437 142 8 3 4290 4430 295229509 295229374 7.040000e-39 172.0
11 TraesCS1D01G444000 chrUn 89.437 142 8 3 4290 4430 301983754 301983889 7.040000e-39 172.0
12 TraesCS1D01G444000 chrUn 100.000 54 0 0 435 488 329494030 329494083 3.370000e-17 100.0
13 TraesCS1D01G444000 chr1A 91.610 1621 55 23 1884 3477 585617555 585619121 0.000000e+00 2165.0
14 TraesCS1D01G444000 chr1A 94.051 1328 69 5 563 1881 585615538 585616864 0.000000e+00 2006.0
15 TraesCS1D01G444000 chr1A 88.171 1099 58 27 3572 4633 585619360 585620423 0.000000e+00 1243.0
16 TraesCS1D01G444000 chr1A 95.156 289 11 2 1 289 585602166 585602451 2.240000e-123 453.0
17 TraesCS1D01G444000 chr1A 95.000 220 9 1 285 502 585615190 585615409 1.410000e-90 344.0
18 TraesCS1D01G444000 chr1A 90.909 99 8 1 4814 4912 585620571 585620668 1.190000e-26 132.0
19 TraesCS1D01G444000 chr1A 86.842 76 10 0 3495 3570 585619251 585619326 9.430000e-13 86.1
20 TraesCS1D01G444000 chr7A 96.279 215 8 0 5071 5285 315975333 315975119 2.340000e-93 353.0
21 TraesCS1D01G444000 chr7A 92.073 164 12 1 4911 5074 315975597 315975435 4.120000e-56 230.0
22 TraesCS1D01G444000 chr7A 92.373 118 9 0 4912 5029 593948406 593948523 9.100000e-38 169.0
23 TraesCS1D01G444000 chr7A 80.751 213 25 5 5073 5285 593960044 593960240 9.170000e-33 152.0
24 TraesCS1D01G444000 chr3B 95.434 219 9 1 5068 5285 33382916 33383134 1.090000e-91 348.0
25 TraesCS1D01G444000 chr3B 95.122 164 8 0 338 501 326069135 326069298 5.250000e-65 259.0
26 TraesCS1D01G444000 chr3B 100.000 35 0 0 4772 4806 228209643 228209609 1.230000e-06 65.8
27 TraesCS1D01G444000 chr7D 96.154 208 8 0 5078 5285 217010482 217010689 1.820000e-89 340.0
28 TraesCS1D01G444000 chr7D 91.250 160 9 1 4912 5071 217010192 217010346 4.150000e-51 213.0
29 TraesCS1D01G444000 chr2A 95.349 215 9 1 5071 5285 78364436 78364649 1.820000e-89 340.0
30 TraesCS1D01G444000 chr2A 93.897 213 13 0 5073 5285 17560701 17560913 6.600000e-84 322.0
31 TraesCS1D01G444000 chr2A 91.071 168 14 1 4909 5076 78364170 78364336 5.330000e-55 226.0
32 TraesCS1D01G444000 chr2A 92.000 150 7 2 4913 5061 17560374 17560519 6.940000e-49 206.0
33 TraesCS1D01G444000 chr2A 92.308 117 9 0 4913 5029 409992977 409993093 3.270000e-37 167.0
34 TraesCS1D01G444000 chr1B 94.521 219 11 1 5068 5285 530455018 530454800 2.360000e-88 337.0
35 TraesCS1D01G444000 chr1B 91.195 159 9 3 4913 5071 530455305 530455152 1.490000e-50 211.0
36 TraesCS1D01G444000 chr4A 93.488 215 14 0 5071 5285 143888571 143888357 2.370000e-83 320.0
37 TraesCS1D01G444000 chr4A 90.854 164 14 1 4913 5076 143888833 143888671 8.910000e-53 219.0
38 TraesCS1D01G444000 chr4A 89.583 144 14 1 5138 5281 733893818 733893676 1.170000e-41 182.0
39 TraesCS1D01G444000 chr4D 92.958 213 15 0 5073 5285 291880423 291880635 1.430000e-80 311.0
40 TraesCS1D01G444000 chr4D 92.169 166 12 1 4911 5076 291880156 291880320 3.180000e-57 233.0
41 TraesCS1D01G444000 chr3A 78.095 420 70 16 2440 2842 58837383 58836969 4.090000e-61 246.0
42 TraesCS1D01G444000 chr3A 97.222 36 1 0 4771 4806 685338078 685338113 1.590000e-05 62.1
43 TraesCS1D01G444000 chr3D 77.995 409 68 15 2451 2842 47090563 47090966 2.460000e-58 237.0
44 TraesCS1D01G444000 chr3D 100.000 35 0 0 4772 4806 603452662 603452628 1.230000e-06 65.8
45 TraesCS1D01G444000 chr7B 100.000 35 0 0 4772 4806 33598675 33598709 1.230000e-06 65.8
46 TraesCS1D01G444000 chr7B 97.222 36 1 0 4774 4809 46985945 46985910 1.590000e-05 62.1
47 TraesCS1D01G444000 chr6A 100.000 35 0 0 4772 4806 116336067 116336101 1.230000e-06 65.8
48 TraesCS1D01G444000 chr5A 100.000 35 0 0 4772 4806 330196342 330196308 1.230000e-06 65.8
49 TraesCS1D01G444000 chr2B 93.023 43 3 0 3210 3252 2657450 2657408 4.420000e-06 63.9
50 TraesCS1D01G444000 chr6D 97.222 36 1 0 4771 4806 3455610 3455575 1.590000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G444000 chr1D 487543924 487549208 5284 False 9760.000000 9760 100.000000 1 5285 1 chr1D.!!$F1 5284
1 TraesCS1D01G444000 chrUn 329494030 329496849 2819 False 1207.666667 3199 95.574667 435 3914 3 chrUn.!!$F5 3479
2 TraesCS1D01G444000 chr1A 585615190 585620668 5478 False 996.016667 2165 91.097167 285 4912 6 chr1A.!!$F2 4627
3 TraesCS1D01G444000 chr2A 17560374 17560913 539 False 264.000000 322 92.948500 4913 5285 2 chr2A.!!$F2 372
4 TraesCS1D01G444000 chr1B 530454800 530455305 505 True 274.000000 337 92.858000 4913 5285 2 chr1B.!!$R1 372

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
255 256 0.179004 ACTTCAATCGGTTGGGTGCA 60.179 50.0 8.88 0.00 35.99 4.57 F
272 273 0.179179 GCAGGCGCTGAAAGTTGATC 60.179 55.0 7.64 0.00 35.30 2.92 F
1620 1754 0.325671 TCATCGAGGAGAAGGCCCTT 60.326 55.0 0.00 0.00 33.36 3.95 F
2172 2997 0.329596 ACATGAGGCAGAAGTTCCCC 59.670 55.0 0.00 0.49 0.00 4.81 F
2871 3696 0.548197 TGTTCCCCGATGGTACCCTT 60.548 55.0 10.07 0.00 33.64 3.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2172 2997 0.452287 CGTACACGTCGTCCAGTGAG 60.452 60.0 0.00 0.00 40.56 3.51 R
2550 3375 0.179137 CATTGCACTGCTCCATGCTG 60.179 55.0 1.98 0.00 42.55 4.41 R
3300 4155 0.109086 CTGCTAGACACCACGACCAG 60.109 60.0 0.00 0.00 0.00 4.00 R
3302 4157 0.171455 CTCTGCTAGACACCACGACC 59.829 60.0 0.00 0.00 0.00 4.79 R
4474 5506 0.036952 GCTAGTCAAGGCTGCAGTGA 60.037 55.0 16.64 8.57 0.00 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.223800 TGCACCGATGATGCCTTC 57.776 55.556 0.00 0.00 42.69 3.46
18 19 1.299321 TGCACCGATGATGCCTTCA 59.701 52.632 0.00 0.00 42.69 3.02
19 20 0.745486 TGCACCGATGATGCCTTCAG 60.745 55.000 0.00 0.00 42.69 3.02
20 21 0.745845 GCACCGATGATGCCTTCAGT 60.746 55.000 0.00 0.00 37.89 3.41
21 22 1.473257 GCACCGATGATGCCTTCAGTA 60.473 52.381 0.00 0.00 37.89 2.74
22 23 2.808202 GCACCGATGATGCCTTCAGTAT 60.808 50.000 0.00 0.00 37.89 2.12
23 24 3.554960 GCACCGATGATGCCTTCAGTATA 60.555 47.826 0.00 0.00 37.89 1.47
24 25 4.631131 CACCGATGATGCCTTCAGTATAA 58.369 43.478 0.00 0.00 37.89 0.98
25 26 5.240891 CACCGATGATGCCTTCAGTATAAT 58.759 41.667 0.00 0.00 37.89 1.28
26 27 5.349817 CACCGATGATGCCTTCAGTATAATC 59.650 44.000 0.00 0.00 37.89 1.75
27 28 5.012046 ACCGATGATGCCTTCAGTATAATCA 59.988 40.000 0.00 0.00 37.89 2.57
28 29 6.111382 CCGATGATGCCTTCAGTATAATCAT 58.889 40.000 0.00 0.00 37.89 2.45
29 30 6.257411 CCGATGATGCCTTCAGTATAATCATC 59.743 42.308 11.60 11.60 43.37 2.92
30 31 6.815142 CGATGATGCCTTCAGTATAATCATCA 59.185 38.462 18.40 10.46 45.44 3.07
31 32 7.494952 CGATGATGCCTTCAGTATAATCATCAT 59.505 37.037 18.40 11.76 45.44 2.45
32 33 8.734218 ATGATGCCTTCAGTATAATCATCATC 57.266 34.615 7.92 0.00 42.87 2.92
33 34 7.914859 TGATGCCTTCAGTATAATCATCATCT 58.085 34.615 0.00 0.00 35.39 2.90
34 35 8.039538 TGATGCCTTCAGTATAATCATCATCTC 58.960 37.037 0.00 0.00 35.39 2.75
35 36 6.705302 TGCCTTCAGTATAATCATCATCTCC 58.295 40.000 0.00 0.00 0.00 3.71
36 37 6.499699 TGCCTTCAGTATAATCATCATCTCCT 59.500 38.462 0.00 0.00 0.00 3.69
37 38 7.016957 TGCCTTCAGTATAATCATCATCTCCTT 59.983 37.037 0.00 0.00 0.00 3.36
38 39 7.333921 GCCTTCAGTATAATCATCATCTCCTTG 59.666 40.741 0.00 0.00 0.00 3.61
39 40 7.823310 CCTTCAGTATAATCATCATCTCCTTGG 59.177 40.741 0.00 0.00 0.00 3.61
40 41 8.496534 TTCAGTATAATCATCATCTCCTTGGA 57.503 34.615 0.00 0.00 0.00 3.53
41 42 8.676397 TCAGTATAATCATCATCTCCTTGGAT 57.324 34.615 0.00 0.00 0.00 3.41
42 43 8.537858 TCAGTATAATCATCATCTCCTTGGATG 58.462 37.037 0.00 0.00 43.01 3.51
43 44 8.319881 CAGTATAATCATCATCTCCTTGGATGT 58.680 37.037 0.00 0.00 42.45 3.06
44 45 9.552695 AGTATAATCATCATCTCCTTGGATGTA 57.447 33.333 0.00 0.00 42.45 2.29
47 48 6.760440 ATCATCATCTCCTTGGATGTAACT 57.240 37.500 0.00 0.00 42.45 2.24
48 49 6.566079 TCATCATCTCCTTGGATGTAACTT 57.434 37.500 0.00 0.00 42.45 2.66
49 50 7.675161 TCATCATCTCCTTGGATGTAACTTA 57.325 36.000 0.00 0.00 42.45 2.24
50 51 7.730084 TCATCATCTCCTTGGATGTAACTTAG 58.270 38.462 0.00 0.00 42.45 2.18
51 52 7.565029 TCATCATCTCCTTGGATGTAACTTAGA 59.435 37.037 0.00 0.00 42.45 2.10
52 53 7.353414 TCATCTCCTTGGATGTAACTTAGAG 57.647 40.000 0.00 0.00 42.45 2.43
53 54 6.897966 TCATCTCCTTGGATGTAACTTAGAGT 59.102 38.462 0.00 0.00 42.45 3.24
54 55 6.531503 TCTCCTTGGATGTAACTTAGAGTG 57.468 41.667 0.00 0.00 0.00 3.51
55 56 6.017192 TCTCCTTGGATGTAACTTAGAGTGT 58.983 40.000 0.00 0.00 0.00 3.55
56 57 6.037786 TCCTTGGATGTAACTTAGAGTGTG 57.962 41.667 0.00 0.00 0.00 3.82
57 58 5.778241 TCCTTGGATGTAACTTAGAGTGTGA 59.222 40.000 0.00 0.00 0.00 3.58
58 59 6.269077 TCCTTGGATGTAACTTAGAGTGTGAA 59.731 38.462 0.00 0.00 0.00 3.18
59 60 6.591834 CCTTGGATGTAACTTAGAGTGTGAAG 59.408 42.308 0.00 0.00 0.00 3.02
60 61 6.665992 TGGATGTAACTTAGAGTGTGAAGT 57.334 37.500 0.00 0.00 37.50 3.01
61 62 6.455647 TGGATGTAACTTAGAGTGTGAAGTG 58.544 40.000 0.00 0.00 36.05 3.16
62 63 6.041637 TGGATGTAACTTAGAGTGTGAAGTGT 59.958 38.462 0.00 0.00 36.05 3.55
63 64 6.366332 GGATGTAACTTAGAGTGTGAAGTGTG 59.634 42.308 0.00 0.00 36.05 3.82
64 65 6.459670 TGTAACTTAGAGTGTGAAGTGTGA 57.540 37.500 0.00 0.00 36.05 3.58
65 66 6.869695 TGTAACTTAGAGTGTGAAGTGTGAA 58.130 36.000 0.00 0.00 36.05 3.18
66 67 6.755141 TGTAACTTAGAGTGTGAAGTGTGAAC 59.245 38.462 0.00 0.00 36.05 3.18
67 68 5.599999 ACTTAGAGTGTGAAGTGTGAACT 57.400 39.130 0.00 0.00 34.61 3.01
68 69 6.710597 ACTTAGAGTGTGAAGTGTGAACTA 57.289 37.500 0.00 0.00 34.61 2.24
69 70 6.505272 ACTTAGAGTGTGAAGTGTGAACTAC 58.495 40.000 0.00 0.00 34.61 2.73
70 71 6.096423 ACTTAGAGTGTGAAGTGTGAACTACA 59.904 38.462 0.00 0.00 34.61 2.74
71 72 5.339008 AGAGTGTGAAGTGTGAACTACAA 57.661 39.130 0.00 0.00 41.89 2.41
72 73 5.109903 AGAGTGTGAAGTGTGAACTACAAC 58.890 41.667 0.00 0.00 41.89 3.32
73 74 4.827692 AGTGTGAAGTGTGAACTACAACA 58.172 39.130 0.00 0.00 41.89 3.33
74 75 4.630069 AGTGTGAAGTGTGAACTACAACAC 59.370 41.667 0.00 0.00 43.05 3.32
75 76 3.936453 TGTGAAGTGTGAACTACAACACC 59.064 43.478 2.49 0.00 41.89 4.16
76 77 3.936453 GTGAAGTGTGAACTACAACACCA 59.064 43.478 2.49 0.00 41.89 4.17
77 78 4.034048 GTGAAGTGTGAACTACAACACCAG 59.966 45.833 2.49 0.00 41.89 4.00
78 79 2.561569 AGTGTGAACTACAACACCAGC 58.438 47.619 2.49 0.00 41.89 4.85
79 80 2.170607 AGTGTGAACTACAACACCAGCT 59.829 45.455 2.49 0.00 41.89 4.24
80 81 3.386726 AGTGTGAACTACAACACCAGCTA 59.613 43.478 2.49 0.00 41.89 3.32
81 82 3.741344 GTGTGAACTACAACACCAGCTAG 59.259 47.826 0.00 0.00 41.89 3.42
82 83 3.386726 TGTGAACTACAACACCAGCTAGT 59.613 43.478 0.00 0.00 36.06 2.57
83 84 4.585581 TGTGAACTACAACACCAGCTAGTA 59.414 41.667 0.00 0.00 36.06 1.82
84 85 5.162075 GTGAACTACAACACCAGCTAGTAG 58.838 45.833 0.00 0.00 38.43 2.57
85 86 3.870633 ACTACAACACCAGCTAGTAGC 57.129 47.619 14.62 14.62 42.84 3.58
86 87 3.162666 ACTACAACACCAGCTAGTAGCA 58.837 45.455 23.77 0.00 45.56 3.49
87 88 3.769844 ACTACAACACCAGCTAGTAGCAT 59.230 43.478 23.77 6.36 45.56 3.79
88 89 2.977914 ACAACACCAGCTAGTAGCATG 58.022 47.619 23.77 19.12 45.56 4.06
89 90 2.303022 ACAACACCAGCTAGTAGCATGT 59.697 45.455 23.77 19.71 45.56 3.21
90 91 3.244561 ACAACACCAGCTAGTAGCATGTT 60.245 43.478 23.77 23.51 45.56 2.71
91 92 3.703001 ACACCAGCTAGTAGCATGTTT 57.297 42.857 23.77 10.34 45.56 2.83
92 93 4.021102 ACACCAGCTAGTAGCATGTTTT 57.979 40.909 23.77 6.95 45.56 2.43
93 94 5.160607 ACACCAGCTAGTAGCATGTTTTA 57.839 39.130 23.77 0.00 45.56 1.52
94 95 4.935808 ACACCAGCTAGTAGCATGTTTTAC 59.064 41.667 23.77 0.00 45.56 2.01
95 96 4.935205 CACCAGCTAGTAGCATGTTTTACA 59.065 41.667 23.77 0.00 45.56 2.41
96 97 5.411361 CACCAGCTAGTAGCATGTTTTACAA 59.589 40.000 23.77 0.00 45.56 2.41
97 98 6.001460 ACCAGCTAGTAGCATGTTTTACAAA 58.999 36.000 23.77 0.00 45.56 2.83
98 99 6.488683 ACCAGCTAGTAGCATGTTTTACAAAA 59.511 34.615 23.77 0.00 45.56 2.44
99 100 7.023575 CCAGCTAGTAGCATGTTTTACAAAAG 58.976 38.462 23.77 0.46 45.56 2.27
100 101 7.308589 CCAGCTAGTAGCATGTTTTACAAAAGT 60.309 37.037 23.77 0.00 45.56 2.66
101 102 8.717821 CAGCTAGTAGCATGTTTTACAAAAGTA 58.282 33.333 23.77 0.00 45.56 2.24
102 103 8.936864 AGCTAGTAGCATGTTTTACAAAAGTAG 58.063 33.333 23.77 0.00 45.56 2.57
103 104 8.718734 GCTAGTAGCATGTTTTACAAAAGTAGT 58.281 33.333 17.47 0.00 41.89 2.73
106 107 9.116067 AGTAGCATGTTTTACAAAAGTAGTTCA 57.884 29.630 0.00 0.00 0.00 3.18
107 108 9.724839 GTAGCATGTTTTACAAAAGTAGTTCAA 57.275 29.630 0.00 0.00 0.00 2.69
109 110 9.816354 AGCATGTTTTACAAAAGTAGTTCAAAT 57.184 25.926 0.00 0.00 0.00 2.32
113 114 8.874816 TGTTTTACAAAAGTAGTTCAAATTGCC 58.125 29.630 0.00 0.00 0.00 4.52
114 115 8.874816 GTTTTACAAAAGTAGTTCAAATTGCCA 58.125 29.630 0.00 0.00 0.00 4.92
115 116 9.606631 TTTTACAAAAGTAGTTCAAATTGCCAT 57.393 25.926 0.00 0.00 0.00 4.40
116 117 8.586570 TTACAAAAGTAGTTCAAATTGCCATG 57.413 30.769 0.00 0.00 0.00 3.66
117 118 6.815089 ACAAAAGTAGTTCAAATTGCCATGA 58.185 32.000 0.00 0.00 0.00 3.07
118 119 7.444299 ACAAAAGTAGTTCAAATTGCCATGAT 58.556 30.769 0.00 0.00 0.00 2.45
119 120 8.584157 ACAAAAGTAGTTCAAATTGCCATGATA 58.416 29.630 0.00 0.00 0.00 2.15
120 121 9.421806 CAAAAGTAGTTCAAATTGCCATGATAA 57.578 29.630 0.00 0.00 0.00 1.75
121 122 9.995003 AAAAGTAGTTCAAATTGCCATGATAAA 57.005 25.926 0.00 0.00 0.00 1.40
122 123 9.995003 AAAGTAGTTCAAATTGCCATGATAAAA 57.005 25.926 0.00 0.00 0.00 1.52
123 124 9.995003 AAGTAGTTCAAATTGCCATGATAAAAA 57.005 25.926 0.00 0.00 0.00 1.94
146 147 7.992754 AAAATCTATCAAGTTTCTGCACTCT 57.007 32.000 0.00 0.00 0.00 3.24
147 148 7.992754 AAATCTATCAAGTTTCTGCACTCTT 57.007 32.000 0.00 0.00 0.00 2.85
148 149 7.992754 AATCTATCAAGTTTCTGCACTCTTT 57.007 32.000 0.00 0.00 0.00 2.52
149 150 6.791887 TCTATCAAGTTTCTGCACTCTTTG 57.208 37.500 0.00 0.00 0.00 2.77
161 162 3.542712 CACTCTTTGCATAGCGTTTGT 57.457 42.857 0.00 0.00 0.00 2.83
162 163 4.661993 CACTCTTTGCATAGCGTTTGTA 57.338 40.909 0.00 0.00 0.00 2.41
163 164 5.221891 CACTCTTTGCATAGCGTTTGTAT 57.778 39.130 0.00 0.00 0.00 2.29
164 165 6.344572 CACTCTTTGCATAGCGTTTGTATA 57.655 37.500 0.00 0.00 0.00 1.47
165 166 6.771076 CACTCTTTGCATAGCGTTTGTATAA 58.229 36.000 0.00 0.00 0.00 0.98
166 167 6.901887 CACTCTTTGCATAGCGTTTGTATAAG 59.098 38.462 0.00 0.00 0.00 1.73
167 168 6.594159 ACTCTTTGCATAGCGTTTGTATAAGT 59.406 34.615 0.00 0.00 0.00 2.24
168 169 6.771076 TCTTTGCATAGCGTTTGTATAAGTG 58.229 36.000 0.00 0.00 0.00 3.16
169 170 6.370442 TCTTTGCATAGCGTTTGTATAAGTGT 59.630 34.615 0.00 0.00 0.00 3.55
170 171 7.546316 TCTTTGCATAGCGTTTGTATAAGTGTA 59.454 33.333 0.00 0.00 0.00 2.90
171 172 7.780008 TTGCATAGCGTTTGTATAAGTGTAT 57.220 32.000 0.00 0.00 0.00 2.29
172 173 7.172654 TGCATAGCGTTTGTATAAGTGTATG 57.827 36.000 0.00 0.00 0.00 2.39
173 174 6.071463 GCATAGCGTTTGTATAAGTGTATGC 58.929 40.000 0.00 0.00 35.06 3.14
174 175 6.292649 GCATAGCGTTTGTATAAGTGTATGCA 60.293 38.462 0.00 0.00 39.86 3.96
175 176 7.571244 GCATAGCGTTTGTATAAGTGTATGCAT 60.571 37.037 3.79 3.79 39.86 3.96
176 177 6.048073 AGCGTTTGTATAAGTGTATGCATG 57.952 37.500 10.16 0.00 33.05 4.06
177 178 5.815222 AGCGTTTGTATAAGTGTATGCATGA 59.185 36.000 10.16 0.00 33.05 3.07
178 179 6.483307 AGCGTTTGTATAAGTGTATGCATGAT 59.517 34.615 10.16 0.00 33.05 2.45
179 180 7.655732 AGCGTTTGTATAAGTGTATGCATGATA 59.344 33.333 10.16 0.00 33.05 2.15
180 181 8.279800 GCGTTTGTATAAGTGTATGCATGATAA 58.720 33.333 10.16 0.00 33.05 1.75
211 212 9.883142 TGATGTTCCATTTGTAGTTTTCTTTTT 57.117 25.926 0.00 0.00 0.00 1.94
213 214 8.710835 TGTTCCATTTGTAGTTTTCTTTTTCC 57.289 30.769 0.00 0.00 0.00 3.13
214 215 7.766738 TGTTCCATTTGTAGTTTTCTTTTTCCC 59.233 33.333 0.00 0.00 0.00 3.97
215 216 7.669089 TCCATTTGTAGTTTTCTTTTTCCCT 57.331 32.000 0.00 0.00 0.00 4.20
216 217 8.084985 TCCATTTGTAGTTTTCTTTTTCCCTT 57.915 30.769 0.00 0.00 0.00 3.95
217 218 7.984617 TCCATTTGTAGTTTTCTTTTTCCCTTG 59.015 33.333 0.00 0.00 0.00 3.61
218 219 7.226523 CCATTTGTAGTTTTCTTTTTCCCTTGG 59.773 37.037 0.00 0.00 0.00 3.61
219 220 7.483580 TTTGTAGTTTTCTTTTTCCCTTGGA 57.516 32.000 0.00 0.00 0.00 3.53
220 221 7.483580 TTGTAGTTTTCTTTTTCCCTTGGAA 57.516 32.000 0.00 0.00 40.27 3.53
221 222 7.107639 TGTAGTTTTCTTTTTCCCTTGGAAG 57.892 36.000 0.00 0.00 43.06 3.46
222 223 6.893005 TGTAGTTTTCTTTTTCCCTTGGAAGA 59.107 34.615 0.00 0.00 43.06 2.87
223 224 6.867519 AGTTTTCTTTTTCCCTTGGAAGAA 57.132 33.333 0.00 0.00 43.06 2.52
224 225 7.437713 AGTTTTCTTTTTCCCTTGGAAGAAT 57.562 32.000 0.00 0.00 43.06 2.40
225 226 7.861629 AGTTTTCTTTTTCCCTTGGAAGAATT 58.138 30.769 0.00 0.00 43.06 2.17
226 227 8.328758 AGTTTTCTTTTTCCCTTGGAAGAATTT 58.671 29.630 0.00 0.00 43.06 1.82
227 228 8.397906 GTTTTCTTTTTCCCTTGGAAGAATTTG 58.602 33.333 0.00 0.00 43.06 2.32
228 229 5.610398 TCTTTTTCCCTTGGAAGAATTTGC 58.390 37.500 0.00 0.00 43.06 3.68
229 230 5.130145 TCTTTTTCCCTTGGAAGAATTTGCA 59.870 36.000 0.00 0.00 43.06 4.08
230 231 5.365021 TTTTCCCTTGGAAGAATTTGCAA 57.635 34.783 0.00 0.00 43.06 4.08
231 232 5.565455 TTTCCCTTGGAAGAATTTGCAAT 57.435 34.783 0.00 0.00 43.06 3.56
232 233 5.565455 TTCCCTTGGAAGAATTTGCAATT 57.435 34.783 0.00 0.00 42.61 2.32
233 234 6.678568 TTCCCTTGGAAGAATTTGCAATTA 57.321 33.333 0.00 0.00 42.61 1.40
234 235 6.872585 TCCCTTGGAAGAATTTGCAATTAT 57.127 33.333 0.00 0.00 42.61 1.28
235 236 7.969690 TCCCTTGGAAGAATTTGCAATTATA 57.030 32.000 0.00 0.00 42.61 0.98
236 237 8.372877 TCCCTTGGAAGAATTTGCAATTATAA 57.627 30.769 0.00 0.00 42.61 0.98
237 238 8.257306 TCCCTTGGAAGAATTTGCAATTATAAC 58.743 33.333 0.00 0.00 42.61 1.89
238 239 8.260114 CCCTTGGAAGAATTTGCAATTATAACT 58.740 33.333 0.00 0.00 42.61 2.24
239 240 9.657419 CCTTGGAAGAATTTGCAATTATAACTT 57.343 29.630 0.00 1.98 42.61 2.66
246 247 9.520204 AGAATTTGCAATTATAACTTCAATCGG 57.480 29.630 0.00 0.00 0.00 4.18
247 248 9.301153 GAATTTGCAATTATAACTTCAATCGGT 57.699 29.630 0.00 0.00 0.00 4.69
248 249 9.651913 AATTTGCAATTATAACTTCAATCGGTT 57.348 25.926 0.00 0.00 0.00 4.44
249 250 8.459521 TTTGCAATTATAACTTCAATCGGTTG 57.540 30.769 0.70 0.70 36.65 3.77
250 251 6.559810 TGCAATTATAACTTCAATCGGTTGG 58.440 36.000 8.88 0.00 35.99 3.77
251 252 5.977129 GCAATTATAACTTCAATCGGTTGGG 59.023 40.000 8.88 4.74 35.99 4.12
252 253 6.405397 GCAATTATAACTTCAATCGGTTGGGT 60.405 38.462 8.88 5.39 35.99 4.51
253 254 6.693315 ATTATAACTTCAATCGGTTGGGTG 57.307 37.500 8.88 1.82 35.99 4.61
254 255 0.958822 AACTTCAATCGGTTGGGTGC 59.041 50.000 8.88 0.00 35.99 5.01
255 256 0.179004 ACTTCAATCGGTTGGGTGCA 60.179 50.000 8.88 0.00 35.99 4.57
256 257 0.523072 CTTCAATCGGTTGGGTGCAG 59.477 55.000 8.88 0.00 35.99 4.41
257 258 0.893270 TTCAATCGGTTGGGTGCAGG 60.893 55.000 8.88 0.00 35.99 4.85
258 259 2.676471 AATCGGTTGGGTGCAGGC 60.676 61.111 0.00 0.00 0.00 4.85
264 265 4.577677 TTGGGTGCAGGCGCTGAA 62.578 61.111 7.64 0.00 39.64 3.02
265 266 4.577677 TGGGTGCAGGCGCTGAAA 62.578 61.111 7.64 0.00 39.64 2.69
266 267 3.741476 GGGTGCAGGCGCTGAAAG 61.741 66.667 7.64 0.00 39.64 2.62
267 268 2.980233 GGTGCAGGCGCTGAAAGT 60.980 61.111 7.64 0.00 39.64 2.66
268 269 2.555547 GGTGCAGGCGCTGAAAGTT 61.556 57.895 7.64 0.00 39.64 2.66
269 270 1.370900 GTGCAGGCGCTGAAAGTTG 60.371 57.895 7.64 0.00 39.64 3.16
270 271 1.525765 TGCAGGCGCTGAAAGTTGA 60.526 52.632 7.64 0.00 39.64 3.18
271 272 0.890542 TGCAGGCGCTGAAAGTTGAT 60.891 50.000 7.64 0.00 39.64 2.57
272 273 0.179179 GCAGGCGCTGAAAGTTGATC 60.179 55.000 7.64 0.00 35.30 2.92
273 274 0.449388 CAGGCGCTGAAAGTTGATCC 59.551 55.000 7.64 0.00 35.30 3.36
274 275 0.326264 AGGCGCTGAAAGTTGATCCT 59.674 50.000 7.64 0.00 35.30 3.24
275 276 1.168714 GGCGCTGAAAGTTGATCCTT 58.831 50.000 7.64 0.00 35.30 3.36
276 277 1.131315 GGCGCTGAAAGTTGATCCTTC 59.869 52.381 7.64 0.00 35.30 3.46
277 278 2.079925 GCGCTGAAAGTTGATCCTTCT 58.920 47.619 0.00 0.00 35.30 2.85
278 279 2.485814 GCGCTGAAAGTTGATCCTTCTT 59.514 45.455 0.00 0.00 35.30 2.52
279 280 3.684788 GCGCTGAAAGTTGATCCTTCTTA 59.315 43.478 0.00 0.00 35.30 2.10
280 281 4.333926 GCGCTGAAAGTTGATCCTTCTTAT 59.666 41.667 0.00 0.00 35.30 1.73
281 282 5.163713 GCGCTGAAAGTTGATCCTTCTTATT 60.164 40.000 0.00 0.00 35.30 1.40
282 283 6.623767 GCGCTGAAAGTTGATCCTTCTTATTT 60.624 38.462 0.00 0.00 35.30 1.40
283 284 6.963805 CGCTGAAAGTTGATCCTTCTTATTTC 59.036 38.462 0.00 0.00 35.30 2.17
336 337 2.823984 TCACCTAAGCGACGAAACAAA 58.176 42.857 0.00 0.00 0.00 2.83
373 374 5.801947 GCAAACAAATGCAAGAGTAGGTATG 59.198 40.000 0.00 0.00 45.70 2.39
375 376 7.361713 GCAAACAAATGCAAGAGTAGGTATGTA 60.362 37.037 0.00 0.00 45.70 2.29
376 377 8.511321 CAAACAAATGCAAGAGTAGGTATGTAA 58.489 33.333 0.00 0.00 0.00 2.41
419 420 1.398692 AAACCACAACATTGTCGGCT 58.601 45.000 11.04 0.51 39.91 5.52
504 507 0.604578 TAAGTTTGGGAGTCGTCGGG 59.395 55.000 0.00 0.00 0.00 5.14
505 508 1.405272 AAGTTTGGGAGTCGTCGGGT 61.405 55.000 0.00 0.00 0.00 5.28
511 514 4.131088 GAGTCGTCGGGTGGGCTC 62.131 72.222 0.00 0.00 0.00 4.70
523 526 4.189188 GGGCTCGAGCGCGACTAA 62.189 66.667 34.43 0.00 43.91 2.24
524 527 2.950194 GGCTCGAGCGCGACTAAC 60.950 66.667 29.81 10.68 42.51 2.34
525 528 2.100603 GCTCGAGCGCGACTAACT 59.899 61.111 23.61 0.00 42.51 2.24
526 529 2.218239 GCTCGAGCGCGACTAACTG 61.218 63.158 23.61 0.00 42.51 3.16
528 531 0.587737 CTCGAGCGCGACTAACTGAG 60.588 60.000 12.10 8.44 42.51 3.35
531 636 1.201998 CGAGCGCGACTAACTGAGTTA 60.202 52.381 12.10 4.81 39.06 2.24
534 639 1.401931 GCGCGACTAACTGAGTTACCA 60.402 52.381 12.10 0.00 39.06 3.25
551 656 9.349713 TGAGTTACCATAAAAGTCACAAAGAAT 57.650 29.630 0.00 0.00 32.64 2.40
557 662 9.349713 ACCATAAAAGTCACAAAGAATTCTACA 57.650 29.630 8.75 0.00 32.53 2.74
561 666 6.824305 AAGTCACAAAGAATTCTACATGGG 57.176 37.500 8.75 9.75 25.64 4.00
562 667 6.126863 AGTCACAAAGAATTCTACATGGGA 57.873 37.500 8.75 11.90 0.00 4.37
563 668 6.542821 AGTCACAAAGAATTCTACATGGGAA 58.457 36.000 17.49 1.54 0.00 3.97
564 669 7.004086 AGTCACAAAGAATTCTACATGGGAAA 58.996 34.615 17.49 0.84 0.00 3.13
565 670 7.505585 AGTCACAAAGAATTCTACATGGGAAAA 59.494 33.333 17.49 0.29 0.00 2.29
566 671 7.809806 GTCACAAAGAATTCTACATGGGAAAAG 59.190 37.037 17.49 4.54 0.00 2.27
567 672 7.505585 TCACAAAGAATTCTACATGGGAAAAGT 59.494 33.333 8.75 0.00 0.00 2.66
568 673 7.809806 CACAAAGAATTCTACATGGGAAAAGTC 59.190 37.037 8.75 1.94 0.00 3.01
569 674 7.505585 ACAAAGAATTCTACATGGGAAAAGTCA 59.494 33.333 8.75 0.00 0.00 3.41
570 675 7.454260 AAGAATTCTACATGGGAAAAGTCAC 57.546 36.000 8.75 0.00 0.00 3.67
571 676 6.542821 AGAATTCTACATGGGAAAAGTCACA 58.457 36.000 6.06 0.00 42.84 3.58
572 677 7.004086 AGAATTCTACATGGGAAAAGTCACAA 58.996 34.615 6.06 0.00 41.66 3.33
573 678 7.505585 AGAATTCTACATGGGAAAAGTCACAAA 59.494 33.333 6.06 0.00 41.66 2.83
574 679 6.633500 TTCTACATGGGAAAAGTCACAAAG 57.367 37.500 0.00 0.00 41.66 2.77
575 680 5.935945 TCTACATGGGAAAAGTCACAAAGA 58.064 37.500 0.00 0.00 41.66 2.52
576 681 6.361433 TCTACATGGGAAAAGTCACAAAGAA 58.639 36.000 0.00 0.00 41.66 2.52
577 682 7.004086 TCTACATGGGAAAAGTCACAAAGAAT 58.996 34.615 0.00 0.00 41.66 2.40
587 692 6.824305 AAGTCACAAAGAATTCTACATGGG 57.176 37.500 8.75 9.75 25.64 4.00
641 755 4.101585 AGACATGAGCGATTGGAAGGAATA 59.898 41.667 0.00 0.00 0.00 1.75
653 767 7.221645 CGATTGGAAGGAATAGATATGTGATCG 59.778 40.741 0.00 0.00 0.00 3.69
690 804 7.199048 TGAATAGGGATATGGATATGACCTGT 58.801 38.462 8.67 2.13 32.30 4.00
723 837 9.847224 ATAATCGGATGTAAGTTCCTTATTTGT 57.153 29.630 0.00 0.00 0.00 2.83
730 844 9.788960 GATGTAAGTTCCTTATTTGTTTGGATC 57.211 33.333 0.00 0.00 0.00 3.36
731 845 7.812648 TGTAAGTTCCTTATTTGTTTGGATCG 58.187 34.615 0.00 0.00 0.00 3.69
732 846 7.662258 TGTAAGTTCCTTATTTGTTTGGATCGA 59.338 33.333 0.00 0.00 0.00 3.59
733 847 7.703058 AAGTTCCTTATTTGTTTGGATCGAT 57.297 32.000 0.00 0.00 0.00 3.59
739 853 6.968904 CCTTATTTGTTTGGATCGATGTCTTG 59.031 38.462 0.54 0.00 0.00 3.02
768 890 5.183228 CGGTAAAAAGAATCCAGAGCCTTA 58.817 41.667 0.00 0.00 0.00 2.69
779 901 2.158900 CCAGAGCCTTATGAATGTCGGT 60.159 50.000 0.00 0.00 0.00 4.69
840 962 2.867109 AGCCAAATCCCGGATATGAG 57.133 50.000 0.73 0.00 0.00 2.90
847 969 5.104360 CCAAATCCCGGATATGAGTATGGAT 60.104 44.000 0.73 0.00 32.67 3.41
865 987 8.874156 AGTATGGATATGATCTTGTAAGCTGAA 58.126 33.333 0.00 0.00 0.00 3.02
866 988 9.149225 GTATGGATATGATCTTGTAAGCTGAAG 57.851 37.037 0.00 0.00 0.00 3.02
876 998 3.877559 TGTAAGCTGAAGTGATCCCATG 58.122 45.455 0.00 0.00 0.00 3.66
891 1015 0.956633 CCATGCTCCGATTCCAATGG 59.043 55.000 0.00 0.00 0.00 3.16
1114 1248 3.036429 GCGCTCTCCCCATTCCAGT 62.036 63.158 0.00 0.00 0.00 4.00
1620 1754 0.325671 TCATCGAGGAGAAGGCCCTT 60.326 55.000 0.00 0.00 33.36 3.95
1849 1983 0.867753 GATGACAGCACGCCTCTACG 60.868 60.000 0.00 0.00 39.50 3.51
1897 2719 1.153061 TATCGGGAGGGCGATCTGT 59.847 57.895 0.00 0.00 0.00 3.41
2102 2924 1.977009 TCCTCGAGAAGCTCCGCAA 60.977 57.895 15.71 0.00 0.00 4.85
2106 2928 3.491652 GAGAAGCTCCGCAACCGC 61.492 66.667 0.00 0.00 0.00 5.68
2165 2990 2.775911 CTCAAGGACATGAGGCAGAA 57.224 50.000 0.00 0.00 42.52 3.02
2172 2997 0.329596 ACATGAGGCAGAAGTTCCCC 59.670 55.000 0.00 0.49 0.00 4.81
2175 3000 2.377136 GAGGCAGAAGTTCCCCTCA 58.623 57.895 24.76 0.00 42.66 3.86
2263 3088 3.324099 CTGGACACCGTCGTCGAGG 62.324 68.421 7.96 7.96 37.89 4.63
2547 3372 2.124151 GAGGGCACGGGCATCATT 60.124 61.111 13.89 0.00 43.71 2.57
2859 3684 1.003718 CAAGACCCTCGTGTTCCCC 60.004 63.158 0.00 0.00 0.00 4.81
2862 3687 2.284405 ACCCTCGTGTTCCCCGAT 60.284 61.111 0.00 0.00 33.27 4.18
2871 3696 0.548197 TGTTCCCCGATGGTACCCTT 60.548 55.000 10.07 0.00 33.64 3.95
2877 3702 1.067582 CGATGGTACCCTTCCGCTC 59.932 63.158 10.07 0.00 0.00 5.03
3028 3872 5.349824 TCAAATTTTAATTTTGCCACGGC 57.650 34.783 0.00 0.00 36.52 5.68
3056 3900 8.569641 ACCGCACTTGACATTAATTTAAGTTAA 58.430 29.630 5.72 5.72 29.78 2.01
3094 3938 7.014711 TGGCATCCAAACTTGTGTTAGAATTAA 59.985 33.333 0.00 0.00 34.96 1.40
3112 3956 7.833786 AGAATTAAATCTTGACATGTGTGCAT 58.166 30.769 1.15 0.00 35.32 3.96
3113 3957 8.308931 AGAATTAAATCTTGACATGTGTGCATT 58.691 29.630 1.15 0.00 31.99 3.56
3156 4011 0.731855 GGCCGTAGTCGTTGAGTCAC 60.732 60.000 0.00 0.00 35.01 3.67
3161 4016 2.719556 CGTAGTCGTTGAGTCACTTGTG 59.280 50.000 0.00 0.00 0.00 3.33
3162 4017 2.961526 AGTCGTTGAGTCACTTGTGT 57.038 45.000 0.00 0.00 0.00 3.72
3163 4018 4.553351 CGTAGTCGTTGAGTCACTTGTGTA 60.553 45.833 0.00 0.00 0.00 2.90
3187 4042 3.688235 ACTAGCGTGAGTCTAGGAGTTT 58.312 45.455 0.00 0.00 40.07 2.66
3208 4063 8.015185 AGTTTGTTAGTGGAGTAGTTCAAGTA 57.985 34.615 0.00 0.00 0.00 2.24
3257 4112 7.247929 AGAAAACTGTACAAAGCTGTTCTAC 57.752 36.000 0.00 0.00 36.96 2.59
3258 4113 6.260271 AGAAAACTGTACAAAGCTGTTCTACC 59.740 38.462 0.00 0.00 36.96 3.18
3259 4114 4.682778 ACTGTACAAAGCTGTTCTACCA 57.317 40.909 0.00 0.00 36.96 3.25
3260 4115 4.377897 ACTGTACAAAGCTGTTCTACCAC 58.622 43.478 0.00 0.00 36.96 4.16
3261 4116 4.101119 ACTGTACAAAGCTGTTCTACCACT 59.899 41.667 0.00 0.00 36.96 4.00
3262 4117 4.628074 TGTACAAAGCTGTTCTACCACTC 58.372 43.478 0.00 0.00 36.96 3.51
3263 4118 3.127425 ACAAAGCTGTTCTACCACTCC 57.873 47.619 0.00 0.00 28.57 3.85
3270 4125 3.834610 CTGTTCTACCACTCCGTAGTTG 58.165 50.000 0.00 0.00 37.56 3.16
3298 4153 1.735018 CATGTGCATGCATGGTTTTGG 59.265 47.619 25.64 4.29 41.70 3.28
3299 4154 0.757512 TGTGCATGCATGGTTTTGGT 59.242 45.000 25.64 0.00 0.00 3.67
3300 4155 1.270199 TGTGCATGCATGGTTTTGGTC 60.270 47.619 25.64 7.17 0.00 4.02
3301 4156 1.001181 GTGCATGCATGGTTTTGGTCT 59.999 47.619 25.64 0.00 0.00 3.85
3302 4157 1.001068 TGCATGCATGGTTTTGGTCTG 59.999 47.619 27.34 0.00 0.00 3.51
3303 4158 1.673626 GCATGCATGGTTTTGGTCTGG 60.674 52.381 27.34 0.00 0.00 3.86
3304 4159 1.619827 CATGCATGGTTTTGGTCTGGT 59.380 47.619 19.40 0.00 0.00 4.00
3305 4160 1.327303 TGCATGGTTTTGGTCTGGTC 58.673 50.000 0.00 0.00 0.00 4.02
3306 4161 0.240945 GCATGGTTTTGGTCTGGTCG 59.759 55.000 0.00 0.00 0.00 4.79
3307 4162 1.604604 CATGGTTTTGGTCTGGTCGT 58.395 50.000 0.00 0.00 0.00 4.34
3308 4163 1.266718 CATGGTTTTGGTCTGGTCGTG 59.733 52.381 0.00 0.00 0.00 4.35
3309 4164 0.464735 TGGTTTTGGTCTGGTCGTGG 60.465 55.000 0.00 0.00 0.00 4.94
3310 4165 0.464916 GGTTTTGGTCTGGTCGTGGT 60.465 55.000 0.00 0.00 0.00 4.16
3311 4166 0.661020 GTTTTGGTCTGGTCGTGGTG 59.339 55.000 0.00 0.00 0.00 4.17
3312 4167 0.253610 TTTTGGTCTGGTCGTGGTGT 59.746 50.000 0.00 0.00 0.00 4.16
3313 4168 0.179067 TTTGGTCTGGTCGTGGTGTC 60.179 55.000 0.00 0.00 0.00 3.67
3314 4169 1.046472 TTGGTCTGGTCGTGGTGTCT 61.046 55.000 0.00 0.00 0.00 3.41
3315 4170 0.178984 TGGTCTGGTCGTGGTGTCTA 60.179 55.000 0.00 0.00 0.00 2.59
3316 4171 0.526662 GGTCTGGTCGTGGTGTCTAG 59.473 60.000 0.00 0.00 0.00 2.43
3317 4172 0.109226 GTCTGGTCGTGGTGTCTAGC 60.109 60.000 0.00 0.00 0.00 3.42
3339 4194 4.562394 GCAGAGCGATTCTAGCAGAATATC 59.438 45.833 10.22 9.24 44.41 1.63
3377 4232 1.370064 ACACGGCTGGGTAGTGTTC 59.630 57.895 0.00 0.00 45.60 3.18
3380 4235 2.436115 GGCTGGGTAGTGTTCGGC 60.436 66.667 0.00 0.00 0.00 5.54
3384 4239 2.344872 GGGTAGTGTTCGGCCGTT 59.655 61.111 27.15 9.41 0.00 4.44
3386 4241 1.005867 GGTAGTGTTCGGCCGTTGA 60.006 57.895 27.15 9.92 0.00 3.18
3388 4243 1.012486 GTAGTGTTCGGCCGTTGAGG 61.012 60.000 27.15 0.00 44.97 3.86
3389 4244 1.180456 TAGTGTTCGGCCGTTGAGGA 61.180 55.000 27.15 0.06 45.00 3.71
3390 4245 1.595929 GTGTTCGGCCGTTGAGGAA 60.596 57.895 27.15 7.98 45.00 3.36
3391 4246 0.953960 GTGTTCGGCCGTTGAGGAAT 60.954 55.000 27.15 0.00 45.00 3.01
3392 4247 0.609151 TGTTCGGCCGTTGAGGAATA 59.391 50.000 27.15 6.16 45.00 1.75
3393 4248 1.287425 GTTCGGCCGTTGAGGAATAG 58.713 55.000 27.15 0.00 45.00 1.73
3394 4249 0.899720 TTCGGCCGTTGAGGAATAGT 59.100 50.000 27.15 0.00 45.00 2.12
3395 4250 0.174845 TCGGCCGTTGAGGAATAGTG 59.825 55.000 27.15 0.00 45.00 2.74
3396 4251 0.174845 CGGCCGTTGAGGAATAGTGA 59.825 55.000 19.50 0.00 45.00 3.41
3397 4252 1.802880 CGGCCGTTGAGGAATAGTGAG 60.803 57.143 19.50 0.00 45.00 3.51
3398 4253 1.291132 GCCGTTGAGGAATAGTGAGC 58.709 55.000 0.00 0.00 45.00 4.26
3399 4254 1.405526 GCCGTTGAGGAATAGTGAGCA 60.406 52.381 0.00 0.00 45.00 4.26
3400 4255 2.544685 CCGTTGAGGAATAGTGAGCAG 58.455 52.381 0.00 0.00 45.00 4.24
3401 4256 2.093973 CCGTTGAGGAATAGTGAGCAGT 60.094 50.000 0.00 0.00 45.00 4.40
3402 4257 2.926200 CGTTGAGGAATAGTGAGCAGTG 59.074 50.000 0.00 0.00 0.00 3.66
3403 4258 3.615110 CGTTGAGGAATAGTGAGCAGTGT 60.615 47.826 0.00 0.00 0.00 3.55
3404 4259 4.319177 GTTGAGGAATAGTGAGCAGTGTT 58.681 43.478 0.00 0.00 0.00 3.32
3405 4260 3.930336 TGAGGAATAGTGAGCAGTGTTG 58.070 45.455 0.00 0.00 0.00 3.33
3406 4261 3.265791 GAGGAATAGTGAGCAGTGTTGG 58.734 50.000 0.00 0.00 0.00 3.77
3407 4262 2.906389 AGGAATAGTGAGCAGTGTTGGA 59.094 45.455 0.00 0.00 0.00 3.53
3408 4263 3.003480 GGAATAGTGAGCAGTGTTGGAC 58.997 50.000 0.00 0.00 0.00 4.02
3409 4264 3.557054 GGAATAGTGAGCAGTGTTGGACA 60.557 47.826 0.00 0.00 0.00 4.02
3410 4265 3.988976 ATAGTGAGCAGTGTTGGACAT 57.011 42.857 0.00 0.00 0.00 3.06
3411 4266 5.419542 GAATAGTGAGCAGTGTTGGACATA 58.580 41.667 0.00 0.00 0.00 2.29
3412 4267 3.325293 AGTGAGCAGTGTTGGACATAG 57.675 47.619 0.00 0.00 0.00 2.23
3434 4289 1.365699 GTACGGGCATGTGTTAGTGG 58.634 55.000 0.00 0.00 0.00 4.00
3444 4299 5.160641 GCATGTGTTAGTGGTGTTAATTGG 58.839 41.667 0.00 0.00 0.00 3.16
3453 4308 8.665685 GTTAGTGGTGTTAATTGGAGTAATGAG 58.334 37.037 0.00 0.00 0.00 2.90
3457 4312 7.606456 GTGGTGTTAATTGGAGTAATGAGAGAA 59.394 37.037 0.00 0.00 0.00 2.87
3490 4402 1.098050 GGCTAGTTTGCTCCATGGTG 58.902 55.000 12.58 10.95 0.00 4.17
3493 4405 2.162408 GCTAGTTTGCTCCATGGTGAAC 59.838 50.000 17.98 13.01 0.00 3.18
3515 4428 1.134226 GTGTACGTGTGGGTTTCTCG 58.866 55.000 0.00 0.00 0.00 4.04
3521 4434 1.604438 CGTGTGGGTTTCTCGTCATGA 60.604 52.381 0.00 0.00 0.00 3.07
3570 4537 1.760029 CCAAGAGGTAGAAGAGGAGGC 59.240 57.143 0.00 0.00 0.00 4.70
3578 4577 3.383825 GGTAGAAGAGGAGGCGATTTGTA 59.616 47.826 0.00 0.00 0.00 2.41
3627 4628 9.062524 GTATAACTGAATTATGCCATGGTGTTA 57.937 33.333 14.67 9.05 35.08 2.41
3700 4701 8.447833 TGTATCTGAATTACCTAAAACTTTGCG 58.552 33.333 0.00 0.00 0.00 4.85
3910 4911 0.949105 CCGTGTACAAGCACCACTCC 60.949 60.000 0.00 0.00 36.08 3.85
3977 4978 1.680522 CCTGCAGCCATCCTCGTACT 61.681 60.000 8.66 0.00 0.00 2.73
3978 4979 0.249238 CTGCAGCCATCCTCGTACTC 60.249 60.000 0.00 0.00 0.00 2.59
4035 5040 1.961277 CGCCCAGTTTGCGTCTCTT 60.961 57.895 0.00 0.00 46.59 2.85
4083 5088 1.986698 GCACCATTGCTGATGTTGTC 58.013 50.000 0.00 0.00 46.17 3.18
4086 5091 1.806542 ACCATTGCTGATGTTGTCGTC 59.193 47.619 0.00 0.00 33.71 4.20
4091 5096 2.047655 TGATGTTGTCGTCGGGGC 60.048 61.111 0.00 0.00 32.69 5.80
4233 5238 1.239968 GGAAGCTGGAGGTTGCTGTG 61.240 60.000 3.14 0.00 40.08 3.66
4235 5240 0.536006 AAGCTGGAGGTTGCTGTGTC 60.536 55.000 0.00 0.00 39.71 3.67
4242 5247 1.604278 GAGGTTGCTGTGTCTTGGAAC 59.396 52.381 0.00 0.00 34.49 3.62
4259 5264 1.705997 AACAAGGACAAGGAGGGCGT 61.706 55.000 0.00 0.00 0.00 5.68
4288 5293 2.427812 GTGGTCTTCTCCTACTAGCCAC 59.572 54.545 0.00 0.00 38.37 5.01
4439 5471 6.520272 TGGTTGAAAAGATGGTTATGTTTGG 58.480 36.000 0.00 0.00 30.97 3.28
4440 5472 6.325028 TGGTTGAAAAGATGGTTATGTTTGGA 59.675 34.615 0.00 0.00 30.97 3.53
4458 5490 9.865321 ATGTTTGGATTGATGAGAATTTACTTG 57.135 29.630 0.00 0.00 0.00 3.16
4459 5491 8.859090 TGTTTGGATTGATGAGAATTTACTTGT 58.141 29.630 0.00 0.00 0.00 3.16
4468 5500 8.946085 TGATGAGAATTTACTTGTGTTATGGTC 58.054 33.333 0.00 0.00 0.00 4.02
4469 5501 9.167311 GATGAGAATTTACTTGTGTTATGGTCT 57.833 33.333 0.00 0.00 0.00 3.85
4470 5502 8.918202 TGAGAATTTACTTGTGTTATGGTCTT 57.082 30.769 0.00 0.00 0.00 3.01
4476 5508 9.733556 ATTTACTTGTGTTATGGTCTTATGTCA 57.266 29.630 0.00 0.00 0.00 3.58
4477 5509 8.542497 TTACTTGTGTTATGGTCTTATGTCAC 57.458 34.615 0.00 0.00 0.00 3.67
4478 5510 6.769512 ACTTGTGTTATGGTCTTATGTCACT 58.230 36.000 0.00 0.00 0.00 3.41
4479 5511 6.650807 ACTTGTGTTATGGTCTTATGTCACTG 59.349 38.462 0.00 0.00 0.00 3.66
4480 5512 4.935205 TGTGTTATGGTCTTATGTCACTGC 59.065 41.667 0.00 0.00 0.00 4.40
4481 5513 4.935205 GTGTTATGGTCTTATGTCACTGCA 59.065 41.667 0.00 0.00 0.00 4.41
4482 5514 5.063944 GTGTTATGGTCTTATGTCACTGCAG 59.936 44.000 13.48 13.48 0.00 4.41
4483 5515 2.099141 TGGTCTTATGTCACTGCAGC 57.901 50.000 15.27 0.00 0.00 5.25
4484 5516 1.339055 TGGTCTTATGTCACTGCAGCC 60.339 52.381 15.27 2.98 0.00 4.85
4485 5517 1.065854 GGTCTTATGTCACTGCAGCCT 60.066 52.381 15.27 0.00 0.00 4.58
4486 5518 2.616510 GGTCTTATGTCACTGCAGCCTT 60.617 50.000 15.27 3.06 0.00 4.35
4487 5519 2.417933 GTCTTATGTCACTGCAGCCTTG 59.582 50.000 15.27 4.87 0.00 3.61
4488 5520 2.302733 TCTTATGTCACTGCAGCCTTGA 59.697 45.455 15.27 7.60 0.00 3.02
4489 5521 2.099141 TATGTCACTGCAGCCTTGAC 57.901 50.000 22.59 22.59 40.14 3.18
4490 5522 0.399454 ATGTCACTGCAGCCTTGACT 59.601 50.000 26.83 15.26 40.34 3.41
4491 5523 1.047801 TGTCACTGCAGCCTTGACTA 58.952 50.000 26.83 15.85 40.34 2.59
4492 5524 1.001293 TGTCACTGCAGCCTTGACTAG 59.999 52.381 26.83 0.00 40.34 2.57
4493 5525 0.036952 TCACTGCAGCCTTGACTAGC 60.037 55.000 15.27 0.00 0.00 3.42
4494 5526 0.321034 CACTGCAGCCTTGACTAGCA 60.321 55.000 15.27 0.00 0.00 3.49
4495 5527 0.321122 ACTGCAGCCTTGACTAGCAC 60.321 55.000 15.27 0.00 0.00 4.40
4496 5528 0.321034 CTGCAGCCTTGACTAGCACA 60.321 55.000 0.00 0.00 0.00 4.57
4497 5529 0.603707 TGCAGCCTTGACTAGCACAC 60.604 55.000 0.00 0.00 0.00 3.82
4507 5539 4.893424 TGACTAGCACACTTTGTTTTCC 57.107 40.909 0.00 0.00 0.00 3.13
4531 5563 3.312828 CTCACTACTGCAACTGTCTCAC 58.687 50.000 0.00 0.00 0.00 3.51
4532 5564 2.959030 TCACTACTGCAACTGTCTCACT 59.041 45.455 0.00 0.00 0.00 3.41
4534 5566 3.492383 CACTACTGCAACTGTCTCACTTG 59.508 47.826 0.00 0.00 0.00 3.16
4535 5567 2.988010 ACTGCAACTGTCTCACTTGA 57.012 45.000 0.00 0.00 0.00 3.02
4536 5568 3.482156 ACTGCAACTGTCTCACTTGAT 57.518 42.857 0.00 0.00 0.00 2.57
4537 5569 3.397482 ACTGCAACTGTCTCACTTGATC 58.603 45.455 0.00 0.00 0.00 2.92
4538 5570 3.070734 ACTGCAACTGTCTCACTTGATCT 59.929 43.478 0.00 0.00 0.00 2.75
4539 5571 3.396560 TGCAACTGTCTCACTTGATCTG 58.603 45.455 0.00 0.00 0.00 2.90
4540 5572 3.070015 TGCAACTGTCTCACTTGATCTGA 59.930 43.478 0.00 0.00 0.00 3.27
4563 5602 3.570912 AAAAGAAACTCCCTTCGTCCA 57.429 42.857 0.00 0.00 0.00 4.02
4576 5615 4.512944 CCCTTCGTCCACAAATAGATGATG 59.487 45.833 0.00 0.00 0.00 3.07
4582 5621 9.825109 TTCGTCCACAAATAGATGATGTATAAA 57.175 29.630 0.00 0.00 0.00 1.40
4615 5654 6.449635 AATTTTAGCAAGCCGTCATATCAA 57.550 33.333 0.00 0.00 0.00 2.57
4623 5662 5.869344 GCAAGCCGTCATATCAATATCACTA 59.131 40.000 0.00 0.00 0.00 2.74
4624 5663 6.536582 GCAAGCCGTCATATCAATATCACTAT 59.463 38.462 0.00 0.00 0.00 2.12
4625 5664 7.706607 GCAAGCCGTCATATCAATATCACTATA 59.293 37.037 0.00 0.00 0.00 1.31
4626 5665 9.755804 CAAGCCGTCATATCAATATCACTATAT 57.244 33.333 0.00 0.00 0.00 0.86
4677 5716 9.508642 TCATATTGTATTTGGTTCAACACAGTA 57.491 29.630 0.00 0.00 0.00 2.74
4679 5718 7.817418 ATTGTATTTGGTTCAACACAGTAGT 57.183 32.000 0.00 0.00 0.00 2.73
4680 5719 7.633193 TTGTATTTGGTTCAACACAGTAGTT 57.367 32.000 0.00 0.00 0.00 2.24
4682 5721 6.600032 TGTATTTGGTTCAACACAGTAGTTGT 59.400 34.615 12.67 0.00 46.78 3.32
4683 5722 5.968528 TTTGGTTCAACACAGTAGTTGTT 57.031 34.783 12.67 0.00 46.78 2.83
4684 5723 7.633193 ATTTGGTTCAACACAGTAGTTGTTA 57.367 32.000 12.67 4.00 46.78 2.41
4685 5724 6.671614 TTGGTTCAACACAGTAGTTGTTAG 57.328 37.500 12.67 0.00 46.78 2.34
4686 5725 5.736813 TGGTTCAACACAGTAGTTGTTAGT 58.263 37.500 12.67 0.00 46.78 2.24
4687 5726 6.174760 TGGTTCAACACAGTAGTTGTTAGTT 58.825 36.000 12.67 0.00 46.78 2.24
4688 5727 6.655848 TGGTTCAACACAGTAGTTGTTAGTTT 59.344 34.615 12.67 0.00 46.78 2.66
4689 5728 7.175293 TGGTTCAACACAGTAGTTGTTAGTTTT 59.825 33.333 12.67 0.00 46.78 2.43
4698 5737 8.774586 ACAGTAGTTGTTAGTTTTTGCTATGAG 58.225 33.333 0.00 0.00 36.31 2.90
4716 5755 6.599638 GCTATGAGTCTGGTCCAACTTAAAAT 59.400 38.462 7.77 4.36 0.00 1.82
4717 5756 7.769044 GCTATGAGTCTGGTCCAACTTAAAATA 59.231 37.037 7.77 4.99 0.00 1.40
4718 5757 9.838339 CTATGAGTCTGGTCCAACTTAAAATAT 57.162 33.333 7.77 0.00 0.00 1.28
4723 5762 8.903820 AGTCTGGTCCAACTTAAAATATTATGC 58.096 33.333 0.00 0.00 0.00 3.14
4724 5763 8.903820 GTCTGGTCCAACTTAAAATATTATGCT 58.096 33.333 0.00 0.00 0.00 3.79
4742 5802 4.081322 TGCTTTCTAACTTCGGAAACCT 57.919 40.909 0.00 0.00 0.00 3.50
4749 5809 2.721425 ACTTCGGAAACCTTGTCCAA 57.279 45.000 0.00 0.00 34.56 3.53
4759 5819 1.455849 CTTGTCCAAGCTGGGTGGA 59.544 57.895 7.13 3.95 43.03 4.02
4797 5857 6.780706 AAAACGCTCTTATATTATGGGACG 57.219 37.500 0.00 0.00 0.00 4.79
4798 5858 5.717078 AACGCTCTTATATTATGGGACGA 57.283 39.130 0.00 0.00 0.00 4.20
4799 5859 5.717078 ACGCTCTTATATTATGGGACGAA 57.283 39.130 0.00 0.00 0.00 3.85
4800 5860 5.710984 ACGCTCTTATATTATGGGACGAAG 58.289 41.667 0.00 0.00 0.00 3.79
4801 5861 5.103000 CGCTCTTATATTATGGGACGAAGG 58.897 45.833 0.00 0.00 0.00 3.46
4802 5862 5.105877 CGCTCTTATATTATGGGACGAAGGA 60.106 44.000 0.00 0.00 0.00 3.36
4803 5863 6.571731 CGCTCTTATATTATGGGACGAAGGAA 60.572 42.308 0.00 0.00 0.00 3.36
4804 5864 6.814146 GCTCTTATATTATGGGACGAAGGAAG 59.186 42.308 0.00 0.00 0.00 3.46
4805 5865 7.525692 GCTCTTATATTATGGGACGAAGGAAGT 60.526 40.741 0.00 0.00 0.00 3.01
4806 5866 8.258850 TCTTATATTATGGGACGAAGGAAGTT 57.741 34.615 0.00 0.00 0.00 2.66
4807 5867 8.711170 TCTTATATTATGGGACGAAGGAAGTTT 58.289 33.333 0.00 0.00 0.00 2.66
4808 5868 9.991906 CTTATATTATGGGACGAAGGAAGTTTA 57.008 33.333 0.00 0.00 0.00 2.01
4809 5869 9.768662 TTATATTATGGGACGAAGGAAGTTTAC 57.231 33.333 0.00 0.00 0.00 2.01
4810 5870 5.750352 TTATGGGACGAAGGAAGTTTACT 57.250 39.130 0.00 0.00 0.00 2.24
4811 5871 3.672767 TGGGACGAAGGAAGTTTACTC 57.327 47.619 0.00 0.00 0.00 2.59
4812 5872 2.301009 TGGGACGAAGGAAGTTTACTCC 59.699 50.000 0.00 0.00 0.00 3.85
4813 5873 2.354503 GGGACGAAGGAAGTTTACTCCC 60.355 54.545 0.00 0.00 0.00 4.30
4814 5874 2.301009 GGACGAAGGAAGTTTACTCCCA 59.699 50.000 0.00 0.00 0.00 4.37
4815 5875 3.244318 GGACGAAGGAAGTTTACTCCCAA 60.244 47.826 0.00 0.00 0.00 4.12
4816 5876 4.565028 GGACGAAGGAAGTTTACTCCCAAT 60.565 45.833 0.00 0.00 0.00 3.16
4817 5877 4.576879 ACGAAGGAAGTTTACTCCCAATC 58.423 43.478 0.00 0.00 0.00 2.67
4818 5878 3.617263 CGAAGGAAGTTTACTCCCAATCG 59.383 47.826 0.55 0.55 0.00 3.34
4822 5882 3.688185 GGAAGTTTACTCCCAATCGGTTC 59.312 47.826 0.00 0.00 0.00 3.62
4826 5886 0.828022 TACTCCCAATCGGTTCGCAT 59.172 50.000 0.00 0.00 0.00 4.73
4836 5896 0.739462 CGGTTCGCATGGCTAACTCA 60.739 55.000 5.74 0.00 35.14 3.41
4837 5897 0.727398 GGTTCGCATGGCTAACTCAC 59.273 55.000 5.74 0.00 35.14 3.51
5028 6088 1.619332 CGAATAGCTAACCTCCTCCCC 59.381 57.143 0.00 0.00 0.00 4.81
5029 6089 1.979308 GAATAGCTAACCTCCTCCCCC 59.021 57.143 0.00 0.00 0.00 5.40
5030 6090 0.949582 ATAGCTAACCTCCTCCCCCA 59.050 55.000 0.00 0.00 0.00 4.96
5031 6091 0.720232 TAGCTAACCTCCTCCCCCAA 59.280 55.000 0.00 0.00 0.00 4.12
5032 6092 0.914902 AGCTAACCTCCTCCCCCAAC 60.915 60.000 0.00 0.00 0.00 3.77
5033 6093 0.914902 GCTAACCTCCTCCCCCAACT 60.915 60.000 0.00 0.00 0.00 3.16
5034 6094 1.205055 CTAACCTCCTCCCCCAACTC 58.795 60.000 0.00 0.00 0.00 3.01
5035 6095 0.494551 TAACCTCCTCCCCCAACTCA 59.505 55.000 0.00 0.00 0.00 3.41
5102 6330 1.565305 GAGCAAGGTACTGAGATGCG 58.435 55.000 0.00 0.00 42.63 4.73
5118 6346 1.376812 GCGGGGTCGTGAAAGGAAT 60.377 57.895 0.00 0.00 38.89 3.01
5174 6402 4.701956 TTCTCGCAGGAAATTTTGGATC 57.298 40.909 0.00 0.00 0.00 3.36
5271 6499 3.561725 CCTATCAAAGTTTGAGATCCGGC 59.438 47.826 22.03 0.00 43.98 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.745486 CTGAAGGCATCATCGGTGCA 60.745 55.000 1.12 0.00 44.25 4.57
1 2 0.745845 ACTGAAGGCATCATCGGTGC 60.746 55.000 0.00 0.00 41.78 5.01
2 3 2.602257 TACTGAAGGCATCATCGGTG 57.398 50.000 0.00 0.00 37.44 4.94
3 4 4.955811 TTATACTGAAGGCATCATCGGT 57.044 40.909 0.00 0.00 37.44 4.69
4 5 5.482006 TGATTATACTGAAGGCATCATCGG 58.518 41.667 0.00 0.00 37.44 4.18
5 6 6.815142 TGATGATTATACTGAAGGCATCATCG 59.185 38.462 12.83 0.00 45.28 3.84
6 7 8.734218 ATGATGATTATACTGAAGGCATCATC 57.266 34.615 0.00 11.40 44.22 2.92
8 9 7.914859 AGATGATGATTATACTGAAGGCATCA 58.085 34.615 0.00 0.00 43.00 3.07
9 10 7.495279 GGAGATGATGATTATACTGAAGGCATC 59.505 40.741 0.00 0.00 33.24 3.91
10 11 7.182387 AGGAGATGATGATTATACTGAAGGCAT 59.818 37.037 0.00 0.00 0.00 4.40
11 12 6.499699 AGGAGATGATGATTATACTGAAGGCA 59.500 38.462 0.00 0.00 0.00 4.75
12 13 6.945218 AGGAGATGATGATTATACTGAAGGC 58.055 40.000 0.00 0.00 0.00 4.35
13 14 7.823310 CCAAGGAGATGATGATTATACTGAAGG 59.177 40.741 0.00 0.00 0.00 3.46
14 15 8.591940 TCCAAGGAGATGATGATTATACTGAAG 58.408 37.037 0.00 0.00 0.00 3.02
15 16 8.496534 TCCAAGGAGATGATGATTATACTGAA 57.503 34.615 0.00 0.00 0.00 3.02
16 17 8.537858 CATCCAAGGAGATGATGATTATACTGA 58.462 37.037 0.00 0.00 45.43 3.41
17 18 8.319881 ACATCCAAGGAGATGATGATTATACTG 58.680 37.037 8.44 0.00 45.43 2.74
18 19 8.446714 ACATCCAAGGAGATGATGATTATACT 57.553 34.615 8.44 0.00 45.43 2.12
21 22 8.888419 AGTTACATCCAAGGAGATGATGATTAT 58.112 33.333 8.44 0.00 45.43 1.28
22 23 8.267620 AGTTACATCCAAGGAGATGATGATTA 57.732 34.615 8.44 0.00 45.43 1.75
23 24 7.146715 AGTTACATCCAAGGAGATGATGATT 57.853 36.000 8.44 0.00 45.43 2.57
24 25 6.760440 AGTTACATCCAAGGAGATGATGAT 57.240 37.500 8.44 0.00 45.43 2.45
25 26 6.566079 AAGTTACATCCAAGGAGATGATGA 57.434 37.500 8.44 0.00 45.43 2.92
26 27 7.730084 TCTAAGTTACATCCAAGGAGATGATG 58.270 38.462 8.44 0.00 45.43 3.07
27 28 7.566879 ACTCTAAGTTACATCCAAGGAGATGAT 59.433 37.037 8.44 0.00 45.43 2.45
28 29 6.897966 ACTCTAAGTTACATCCAAGGAGATGA 59.102 38.462 8.44 0.00 45.43 2.92
30 31 6.670027 ACACTCTAAGTTACATCCAAGGAGAT 59.330 38.462 0.00 0.00 0.00 2.75
31 32 6.017192 ACACTCTAAGTTACATCCAAGGAGA 58.983 40.000 0.00 0.00 0.00 3.71
32 33 6.071334 TCACACTCTAAGTTACATCCAAGGAG 60.071 42.308 0.00 0.00 0.00 3.69
33 34 5.778241 TCACACTCTAAGTTACATCCAAGGA 59.222 40.000 0.00 0.00 0.00 3.36
34 35 6.037786 TCACACTCTAAGTTACATCCAAGG 57.962 41.667 0.00 0.00 0.00 3.61
35 36 7.116948 CACTTCACACTCTAAGTTACATCCAAG 59.883 40.741 0.00 0.00 33.72 3.61
36 37 6.929049 CACTTCACACTCTAAGTTACATCCAA 59.071 38.462 0.00 0.00 33.72 3.53
37 38 6.041637 ACACTTCACACTCTAAGTTACATCCA 59.958 38.462 0.00 0.00 33.72 3.41
38 39 6.366332 CACACTTCACACTCTAAGTTACATCC 59.634 42.308 0.00 0.00 33.72 3.51
39 40 7.145985 TCACACTTCACACTCTAAGTTACATC 58.854 38.462 0.00 0.00 33.72 3.06
40 41 7.050970 TCACACTTCACACTCTAAGTTACAT 57.949 36.000 0.00 0.00 33.72 2.29
41 42 6.459670 TCACACTTCACACTCTAAGTTACA 57.540 37.500 0.00 0.00 33.72 2.41
42 43 6.979238 AGTTCACACTTCACACTCTAAGTTAC 59.021 38.462 0.00 0.00 33.72 2.50
43 44 7.108841 AGTTCACACTTCACACTCTAAGTTA 57.891 36.000 0.00 0.00 33.72 2.24
44 45 5.978814 AGTTCACACTTCACACTCTAAGTT 58.021 37.500 0.00 0.00 33.72 2.66
45 46 5.599999 AGTTCACACTTCACACTCTAAGT 57.400 39.130 0.00 0.00 36.38 2.24
46 47 6.504398 TGTAGTTCACACTTCACACTCTAAG 58.496 40.000 0.00 0.00 34.06 2.18
47 48 6.459670 TGTAGTTCACACTTCACACTCTAA 57.540 37.500 0.00 0.00 34.06 2.10
48 49 6.127563 TGTTGTAGTTCACACTTCACACTCTA 60.128 38.462 0.00 0.00 36.69 2.43
49 50 5.109903 GTTGTAGTTCACACTTCACACTCT 58.890 41.667 0.00 0.00 36.69 3.24
50 51 4.868171 TGTTGTAGTTCACACTTCACACTC 59.132 41.667 0.00 0.00 36.69 3.51
51 52 4.630069 GTGTTGTAGTTCACACTTCACACT 59.370 41.667 0.00 0.00 36.69 3.55
52 53 4.201783 GGTGTTGTAGTTCACACTTCACAC 60.202 45.833 2.69 0.00 36.69 3.82
53 54 3.936453 GGTGTTGTAGTTCACACTTCACA 59.064 43.478 2.69 0.00 36.69 3.58
54 55 3.936453 TGGTGTTGTAGTTCACACTTCAC 59.064 43.478 2.69 0.00 36.69 3.18
55 56 4.188462 CTGGTGTTGTAGTTCACACTTCA 58.812 43.478 2.69 0.00 36.69 3.02
56 57 3.002348 GCTGGTGTTGTAGTTCACACTTC 59.998 47.826 2.69 0.00 36.69 3.01
57 58 2.943033 GCTGGTGTTGTAGTTCACACTT 59.057 45.455 2.69 0.00 36.69 3.16
58 59 2.170607 AGCTGGTGTTGTAGTTCACACT 59.829 45.455 2.69 0.00 36.69 3.55
59 60 2.561569 AGCTGGTGTTGTAGTTCACAC 58.438 47.619 0.00 0.00 36.69 3.82
60 61 3.386726 ACTAGCTGGTGTTGTAGTTCACA 59.613 43.478 0.13 0.00 36.43 3.58
61 62 3.991367 ACTAGCTGGTGTTGTAGTTCAC 58.009 45.455 0.13 0.00 0.00 3.18
62 63 4.321750 GCTACTAGCTGGTGTTGTAGTTCA 60.322 45.833 13.76 0.00 38.45 3.18
63 64 4.174762 GCTACTAGCTGGTGTTGTAGTTC 58.825 47.826 13.76 0.00 38.45 3.01
64 65 3.576982 TGCTACTAGCTGGTGTTGTAGTT 59.423 43.478 13.76 0.00 42.97 2.24
65 66 3.162666 TGCTACTAGCTGGTGTTGTAGT 58.837 45.455 13.76 0.00 42.97 2.73
66 67 3.868757 TGCTACTAGCTGGTGTTGTAG 57.131 47.619 13.76 2.63 42.97 2.74
67 68 3.513912 ACATGCTACTAGCTGGTGTTGTA 59.486 43.478 13.76 3.18 42.97 2.41
68 69 2.303022 ACATGCTACTAGCTGGTGTTGT 59.697 45.455 13.76 7.98 42.97 3.32
69 70 2.977914 ACATGCTACTAGCTGGTGTTG 58.022 47.619 13.76 7.38 42.97 3.33
70 71 3.703001 AACATGCTACTAGCTGGTGTT 57.297 42.857 13.76 13.10 42.97 3.32
71 72 3.703001 AAACATGCTACTAGCTGGTGT 57.297 42.857 13.76 8.55 42.97 4.16
72 73 4.935205 TGTAAAACATGCTACTAGCTGGTG 59.065 41.667 13.76 4.22 42.97 4.17
73 74 5.160607 TGTAAAACATGCTACTAGCTGGT 57.839 39.130 8.18 8.18 42.97 4.00
74 75 6.494893 TTTGTAAAACATGCTACTAGCTGG 57.505 37.500 9.49 0.00 42.97 4.85
75 76 7.584987 ACTTTTGTAAAACATGCTACTAGCTG 58.415 34.615 9.49 7.56 42.97 4.24
76 77 7.745620 ACTTTTGTAAAACATGCTACTAGCT 57.254 32.000 9.49 0.00 42.97 3.32
77 78 8.718734 ACTACTTTTGTAAAACATGCTACTAGC 58.281 33.333 0.61 0.61 36.71 3.42
80 81 9.116067 TGAACTACTTTTGTAAAACATGCTACT 57.884 29.630 0.00 0.00 34.06 2.57
81 82 9.724839 TTGAACTACTTTTGTAAAACATGCTAC 57.275 29.630 0.00 0.00 34.06 3.58
83 84 9.816354 ATTTGAACTACTTTTGTAAAACATGCT 57.184 25.926 0.00 0.00 34.06 3.79
87 88 8.874816 GGCAATTTGAACTACTTTTGTAAAACA 58.125 29.630 0.00 0.00 34.06 2.83
88 89 8.874816 TGGCAATTTGAACTACTTTTGTAAAAC 58.125 29.630 0.00 0.00 34.06 2.43
89 90 9.606631 ATGGCAATTTGAACTACTTTTGTAAAA 57.393 25.926 0.00 0.00 34.06 1.52
90 91 9.039870 CATGGCAATTTGAACTACTTTTGTAAA 57.960 29.630 0.00 0.00 34.06 2.01
91 92 8.417106 TCATGGCAATTTGAACTACTTTTGTAA 58.583 29.630 0.00 0.00 34.06 2.41
92 93 7.946207 TCATGGCAATTTGAACTACTTTTGTA 58.054 30.769 0.00 0.00 0.00 2.41
93 94 6.815089 TCATGGCAATTTGAACTACTTTTGT 58.185 32.000 0.00 0.00 0.00 2.83
94 95 7.894376 ATCATGGCAATTTGAACTACTTTTG 57.106 32.000 0.00 0.00 0.00 2.44
95 96 9.995003 TTTATCATGGCAATTTGAACTACTTTT 57.005 25.926 0.00 0.00 0.00 2.27
96 97 9.995003 TTTTATCATGGCAATTTGAACTACTTT 57.005 25.926 0.00 0.00 0.00 2.66
97 98 9.995003 TTTTTATCATGGCAATTTGAACTACTT 57.005 25.926 0.00 0.00 0.00 2.24
121 122 8.401490 AGAGTGCAGAAACTTGATAGATTTTT 57.599 30.769 0.00 0.00 0.00 1.94
122 123 7.992754 AGAGTGCAGAAACTTGATAGATTTT 57.007 32.000 0.00 0.00 0.00 1.82
123 124 7.992754 AAGAGTGCAGAAACTTGATAGATTT 57.007 32.000 0.00 0.00 0.00 2.17
124 125 7.814642 CAAAGAGTGCAGAAACTTGATAGATT 58.185 34.615 0.00 0.00 0.00 2.40
125 126 7.375106 CAAAGAGTGCAGAAACTTGATAGAT 57.625 36.000 0.00 0.00 0.00 1.98
126 127 6.791887 CAAAGAGTGCAGAAACTTGATAGA 57.208 37.500 0.00 0.00 0.00 1.98
141 142 3.542712 ACAAACGCTATGCAAAGAGTG 57.457 42.857 0.00 0.00 29.35 3.51
142 143 6.594159 ACTTATACAAACGCTATGCAAAGAGT 59.406 34.615 0.00 0.00 0.00 3.24
143 144 6.901887 CACTTATACAAACGCTATGCAAAGAG 59.098 38.462 0.00 0.00 0.00 2.85
144 145 6.370442 ACACTTATACAAACGCTATGCAAAGA 59.630 34.615 0.00 0.00 0.00 2.52
145 146 6.542852 ACACTTATACAAACGCTATGCAAAG 58.457 36.000 0.00 0.00 0.00 2.77
146 147 6.489127 ACACTTATACAAACGCTATGCAAA 57.511 33.333 0.00 0.00 0.00 3.68
147 148 7.626446 CATACACTTATACAAACGCTATGCAA 58.374 34.615 0.00 0.00 0.00 4.08
148 149 6.292649 GCATACACTTATACAAACGCTATGCA 60.293 38.462 0.00 0.00 35.87 3.96
149 150 6.071463 GCATACACTTATACAAACGCTATGC 58.929 40.000 0.00 0.00 0.00 3.14
150 151 7.172654 TGCATACACTTATACAAACGCTATG 57.827 36.000 0.00 0.00 0.00 2.23
151 152 7.655732 TCATGCATACACTTATACAAACGCTAT 59.344 33.333 0.00 0.00 0.00 2.97
152 153 6.981559 TCATGCATACACTTATACAAACGCTA 59.018 34.615 0.00 0.00 0.00 4.26
153 154 5.815222 TCATGCATACACTTATACAAACGCT 59.185 36.000 0.00 0.00 0.00 5.07
154 155 6.043327 TCATGCATACACTTATACAAACGC 57.957 37.500 0.00 0.00 0.00 4.84
189 190 7.985184 AGGGAAAAAGAAAACTACAAATGGAAC 59.015 33.333 0.00 0.00 0.00 3.62
190 191 8.084985 AGGGAAAAAGAAAACTACAAATGGAA 57.915 30.769 0.00 0.00 0.00 3.53
191 192 7.669089 AGGGAAAAAGAAAACTACAAATGGA 57.331 32.000 0.00 0.00 0.00 3.41
192 193 7.226523 CCAAGGGAAAAAGAAAACTACAAATGG 59.773 37.037 0.00 0.00 0.00 3.16
193 194 7.984617 TCCAAGGGAAAAAGAAAACTACAAATG 59.015 33.333 0.00 0.00 0.00 2.32
194 195 8.084985 TCCAAGGGAAAAAGAAAACTACAAAT 57.915 30.769 0.00 0.00 0.00 2.32
195 196 7.483580 TCCAAGGGAAAAAGAAAACTACAAA 57.516 32.000 0.00 0.00 0.00 2.83
196 197 7.397761 TCTTCCAAGGGAAAAAGAAAACTACAA 59.602 33.333 0.00 0.00 41.54 2.41
197 198 6.893005 TCTTCCAAGGGAAAAAGAAAACTACA 59.107 34.615 0.00 0.00 41.54 2.74
198 199 7.342769 TCTTCCAAGGGAAAAAGAAAACTAC 57.657 36.000 0.00 0.00 41.54 2.73
199 200 7.964666 TTCTTCCAAGGGAAAAAGAAAACTA 57.035 32.000 0.00 0.00 41.54 2.24
200 201 6.867519 TTCTTCCAAGGGAAAAAGAAAACT 57.132 33.333 0.00 0.00 41.54 2.66
201 202 8.397906 CAAATTCTTCCAAGGGAAAAAGAAAAC 58.602 33.333 0.00 0.00 41.54 2.43
202 203 7.066887 GCAAATTCTTCCAAGGGAAAAAGAAAA 59.933 33.333 0.00 0.00 41.54 2.29
203 204 6.542005 GCAAATTCTTCCAAGGGAAAAAGAAA 59.458 34.615 0.00 0.00 41.54 2.52
204 205 6.054941 GCAAATTCTTCCAAGGGAAAAAGAA 58.945 36.000 0.00 0.33 41.54 2.52
205 206 5.130145 TGCAAATTCTTCCAAGGGAAAAAGA 59.870 36.000 0.00 0.00 41.54 2.52
206 207 5.367302 TGCAAATTCTTCCAAGGGAAAAAG 58.633 37.500 0.00 0.00 41.54 2.27
207 208 5.365021 TGCAAATTCTTCCAAGGGAAAAA 57.635 34.783 0.00 0.00 41.54 1.94
208 209 5.365021 TTGCAAATTCTTCCAAGGGAAAA 57.635 34.783 0.00 0.00 41.54 2.29
209 210 5.565455 ATTGCAAATTCTTCCAAGGGAAA 57.435 34.783 1.71 0.00 41.54 3.13
210 211 5.565455 AATTGCAAATTCTTCCAAGGGAA 57.435 34.783 1.71 0.00 39.66 3.97
211 212 6.872585 ATAATTGCAAATTCTTCCAAGGGA 57.127 33.333 1.71 0.00 0.00 4.20
212 213 8.260114 AGTTATAATTGCAAATTCTTCCAAGGG 58.740 33.333 1.71 0.00 0.00 3.95
213 214 9.657419 AAGTTATAATTGCAAATTCTTCCAAGG 57.343 29.630 1.71 0.00 0.00 3.61
220 221 9.520204 CCGATTGAAGTTATAATTGCAAATTCT 57.480 29.630 1.71 0.00 31.76 2.40
221 222 9.301153 ACCGATTGAAGTTATAATTGCAAATTC 57.699 29.630 1.71 0.00 31.28 2.17
222 223 9.651913 AACCGATTGAAGTTATAATTGCAAATT 57.348 25.926 1.71 1.18 0.00 1.82
223 224 9.086336 CAACCGATTGAAGTTATAATTGCAAAT 57.914 29.630 1.71 0.00 38.15 2.32
224 225 7.543868 CCAACCGATTGAAGTTATAATTGCAAA 59.456 33.333 1.71 0.00 38.15 3.68
225 226 7.032580 CCAACCGATTGAAGTTATAATTGCAA 58.967 34.615 0.00 0.00 38.15 4.08
226 227 6.405286 CCCAACCGATTGAAGTTATAATTGCA 60.405 38.462 0.00 0.00 38.15 4.08
227 228 5.977129 CCCAACCGATTGAAGTTATAATTGC 59.023 40.000 0.00 0.00 38.15 3.56
228 229 6.972328 CACCCAACCGATTGAAGTTATAATTG 59.028 38.462 0.00 0.00 38.15 2.32
229 230 6.405397 GCACCCAACCGATTGAAGTTATAATT 60.405 38.462 0.00 0.00 38.15 1.40
230 231 5.067283 GCACCCAACCGATTGAAGTTATAAT 59.933 40.000 0.00 0.00 38.15 1.28
231 232 4.396790 GCACCCAACCGATTGAAGTTATAA 59.603 41.667 0.00 0.00 38.15 0.98
232 233 3.942748 GCACCCAACCGATTGAAGTTATA 59.057 43.478 0.00 0.00 38.15 0.98
233 234 2.752903 GCACCCAACCGATTGAAGTTAT 59.247 45.455 0.00 0.00 38.15 1.89
234 235 2.156098 GCACCCAACCGATTGAAGTTA 58.844 47.619 0.00 0.00 38.15 2.24
235 236 0.958822 GCACCCAACCGATTGAAGTT 59.041 50.000 0.00 0.00 38.15 2.66
236 237 0.179004 TGCACCCAACCGATTGAAGT 60.179 50.000 0.00 0.00 38.15 3.01
237 238 0.523072 CTGCACCCAACCGATTGAAG 59.477 55.000 0.00 0.00 38.15 3.02
238 239 0.893270 CCTGCACCCAACCGATTGAA 60.893 55.000 0.00 0.00 38.15 2.69
239 240 1.303236 CCTGCACCCAACCGATTGA 60.303 57.895 0.00 0.00 38.15 2.57
240 241 2.993471 GCCTGCACCCAACCGATTG 61.993 63.158 0.00 0.00 35.40 2.67
241 242 2.676471 GCCTGCACCCAACCGATT 60.676 61.111 0.00 0.00 0.00 3.34
247 248 4.577677 TTCAGCGCCTGCACCCAA 62.578 61.111 2.29 0.00 46.23 4.12
248 249 4.577677 TTTCAGCGCCTGCACCCA 62.578 61.111 2.29 0.00 46.23 4.51
249 250 3.741476 CTTTCAGCGCCTGCACCC 61.741 66.667 2.29 0.00 46.23 4.61
250 251 2.555547 AACTTTCAGCGCCTGCACC 61.556 57.895 2.29 0.00 46.23 5.01
251 252 1.370900 CAACTTTCAGCGCCTGCAC 60.371 57.895 2.29 0.00 46.23 4.57
252 253 0.890542 ATCAACTTTCAGCGCCTGCA 60.891 50.000 2.29 0.00 46.23 4.41
253 254 0.179179 GATCAACTTTCAGCGCCTGC 60.179 55.000 2.29 0.00 43.24 4.85
254 255 0.449388 GGATCAACTTTCAGCGCCTG 59.551 55.000 2.29 1.50 0.00 4.85
255 256 0.326264 AGGATCAACTTTCAGCGCCT 59.674 50.000 2.29 0.00 0.00 5.52
256 257 1.131315 GAAGGATCAACTTTCAGCGCC 59.869 52.381 2.29 0.00 35.18 6.53
257 258 2.079925 AGAAGGATCAACTTTCAGCGC 58.920 47.619 0.00 0.00 37.11 5.92
258 259 6.428385 AATAAGAAGGATCAACTTTCAGCG 57.572 37.500 0.00 0.00 37.11 5.18
259 260 7.820648 TGAAATAAGAAGGATCAACTTTCAGC 58.179 34.615 0.00 0.00 37.11 4.26
260 261 9.837525 CTTGAAATAAGAAGGATCAACTTTCAG 57.162 33.333 0.00 0.00 37.11 3.02
261 262 9.573166 TCTTGAAATAAGAAGGATCAACTTTCA 57.427 29.630 0.00 0.00 37.11 2.69
264 265 8.465201 GCATCTTGAAATAAGAAGGATCAACTT 58.535 33.333 0.00 0.00 0.00 2.66
265 266 7.833183 AGCATCTTGAAATAAGAAGGATCAACT 59.167 33.333 0.00 0.00 0.00 3.16
266 267 7.994194 AGCATCTTGAAATAAGAAGGATCAAC 58.006 34.615 0.00 0.00 0.00 3.18
267 268 7.011763 CGAGCATCTTGAAATAAGAAGGATCAA 59.988 37.037 0.00 0.00 0.00 2.57
268 269 6.481313 CGAGCATCTTGAAATAAGAAGGATCA 59.519 38.462 0.00 0.00 0.00 2.92
269 270 6.703607 TCGAGCATCTTGAAATAAGAAGGATC 59.296 38.462 0.00 0.00 0.00 3.36
270 271 6.586344 TCGAGCATCTTGAAATAAGAAGGAT 58.414 36.000 0.00 0.00 0.00 3.24
271 272 5.977635 TCGAGCATCTTGAAATAAGAAGGA 58.022 37.500 0.00 0.00 0.00 3.36
272 273 6.045318 TCTCGAGCATCTTGAAATAAGAAGG 58.955 40.000 7.81 0.00 0.00 3.46
273 274 7.164226 CTCTCGAGCATCTTGAAATAAGAAG 57.836 40.000 7.81 0.00 0.00 2.85
336 337 1.225855 TGTTTGCATCTTTCGACGCT 58.774 45.000 0.00 0.00 0.00 5.07
419 420 2.102252 GGTCAACCAAATGCTGTGGAAA 59.898 45.455 7.74 0.00 39.62 3.13
508 511 2.100603 AGTTAGTCGCGCTCGAGC 59.899 61.111 27.64 27.64 46.46 5.03
510 513 1.296755 ACTCAGTTAGTCGCGCTCGA 61.297 55.000 5.56 0.00 43.28 4.04
511 514 0.454620 AACTCAGTTAGTCGCGCTCG 60.455 55.000 5.56 0.00 37.50 5.03
512 515 2.175566 GTAACTCAGTTAGTCGCGCTC 58.824 52.381 5.56 0.00 37.50 5.03
513 516 1.135460 GGTAACTCAGTTAGTCGCGCT 60.135 52.381 5.56 4.52 37.50 5.92
514 517 1.266466 GGTAACTCAGTTAGTCGCGC 58.734 55.000 0.00 0.00 37.50 6.86
515 518 2.624316 TGGTAACTCAGTTAGTCGCG 57.376 50.000 0.00 0.00 37.50 5.87
516 519 6.589139 ACTTTTATGGTAACTCAGTTAGTCGC 59.411 38.462 0.00 0.00 37.50 5.19
517 520 7.811236 TGACTTTTATGGTAACTCAGTTAGTCG 59.189 37.037 0.00 0.00 37.50 4.18
518 521 8.923683 GTGACTTTTATGGTAACTCAGTTAGTC 58.076 37.037 0.00 1.84 37.50 2.59
519 522 8.426489 TGTGACTTTTATGGTAACTCAGTTAGT 58.574 33.333 0.00 0.00 41.49 2.24
520 523 8.827177 TGTGACTTTTATGGTAACTCAGTTAG 57.173 34.615 0.00 0.00 37.61 2.34
522 525 8.514330 TTTGTGACTTTTATGGTAACTCAGTT 57.486 30.769 0.00 0.00 37.61 3.16
523 526 7.990886 TCTTTGTGACTTTTATGGTAACTCAGT 59.009 33.333 0.00 0.00 37.61 3.41
524 527 8.378172 TCTTTGTGACTTTTATGGTAACTCAG 57.622 34.615 0.00 0.00 37.61 3.35
525 528 8.740123 TTCTTTGTGACTTTTATGGTAACTCA 57.260 30.769 0.00 0.00 37.61 3.41
531 636 9.349713 TGTAGAATTCTTTGTGACTTTTATGGT 57.650 29.630 14.36 0.00 0.00 3.55
551 656 6.361433 TCTTTGTGACTTTTCCCATGTAGAA 58.639 36.000 0.00 0.00 0.00 2.10
552 657 5.935945 TCTTTGTGACTTTTCCCATGTAGA 58.064 37.500 0.00 0.00 0.00 2.59
553 658 6.633500 TTCTTTGTGACTTTTCCCATGTAG 57.367 37.500 0.00 0.00 0.00 2.74
554 659 7.505585 AGAATTCTTTGTGACTTTTCCCATGTA 59.494 33.333 0.88 0.00 0.00 2.29
555 660 6.324770 AGAATTCTTTGTGACTTTTCCCATGT 59.675 34.615 0.88 0.00 0.00 3.21
556 661 6.752168 AGAATTCTTTGTGACTTTTCCCATG 58.248 36.000 0.88 0.00 0.00 3.66
557 662 6.983906 AGAATTCTTTGTGACTTTTCCCAT 57.016 33.333 0.88 0.00 0.00 4.00
558 663 6.831353 TGTAGAATTCTTTGTGACTTTTCCCA 59.169 34.615 14.36 0.00 0.00 4.37
559 664 7.272037 TGTAGAATTCTTTGTGACTTTTCCC 57.728 36.000 14.36 0.00 0.00 3.97
560 665 7.809806 CCATGTAGAATTCTTTGTGACTTTTCC 59.190 37.037 14.36 0.00 0.00 3.13
561 666 7.809806 CCCATGTAGAATTCTTTGTGACTTTTC 59.190 37.037 14.36 0.00 0.00 2.29
562 667 7.505585 TCCCATGTAGAATTCTTTGTGACTTTT 59.494 33.333 14.36 0.00 0.00 2.27
563 668 7.004086 TCCCATGTAGAATTCTTTGTGACTTT 58.996 34.615 14.36 0.00 0.00 2.66
564 669 6.542821 TCCCATGTAGAATTCTTTGTGACTT 58.457 36.000 14.36 0.72 0.00 3.01
565 670 6.126863 TCCCATGTAGAATTCTTTGTGACT 57.873 37.500 14.36 0.00 0.00 3.41
566 671 6.817765 TTCCCATGTAGAATTCTTTGTGAC 57.182 37.500 14.36 5.82 0.00 3.67
567 672 7.831691 TTTTCCCATGTAGAATTCTTTGTGA 57.168 32.000 14.36 3.84 0.00 3.58
711 825 6.852664 ACATCGATCCAAACAAATAAGGAAC 58.147 36.000 0.00 0.00 33.17 3.62
739 853 6.183360 GCTCTGGATTCTTTTTACCGTCTTAC 60.183 42.308 0.00 0.00 0.00 2.34
768 890 1.227556 GGCGCCTACCGACATTCAT 60.228 57.895 22.15 0.00 46.81 2.57
779 901 2.875933 CCATCTAAATTTTCGGCGCCTA 59.124 45.455 26.68 11.79 0.00 3.93
787 909 9.098355 GGCATTCTTTAACCCATCTAAATTTTC 57.902 33.333 0.00 0.00 0.00 2.29
794 916 5.200483 CCTTGGCATTCTTTAACCCATCTA 58.800 41.667 0.00 0.00 0.00 1.98
840 962 9.149225 CTTCAGCTTACAAGATCATATCCATAC 57.851 37.037 0.00 0.00 0.00 2.39
847 969 7.212976 GGATCACTTCAGCTTACAAGATCATA 58.787 38.462 13.88 0.00 33.99 2.15
860 982 1.307097 GAGCATGGGATCACTTCAGC 58.693 55.000 0.00 0.00 0.00 4.26
865 987 1.071385 GAATCGGAGCATGGGATCACT 59.929 52.381 0.00 0.00 0.00 3.41
866 988 1.517242 GAATCGGAGCATGGGATCAC 58.483 55.000 0.00 0.00 0.00 3.06
876 998 0.101219 GCAACCATTGGAATCGGAGC 59.899 55.000 10.37 0.00 0.00 4.70
1542 1676 0.530650 CCTCGCGCATGACCTTGTAT 60.531 55.000 8.75 0.00 0.00 2.29
1849 1983 4.856607 CTCGCCCTCGTCGAAGCC 62.857 72.222 10.41 0.00 35.38 4.35
1881 2015 2.363795 AACAGATCGCCCTCCCGA 60.364 61.111 0.00 0.00 41.98 5.14
1882 2016 2.202932 CAACAGATCGCCCTCCCG 60.203 66.667 0.00 0.00 0.00 5.14
1978 2800 1.578206 GCCTTCTTCCTGGCGTTGAC 61.578 60.000 0.00 0.00 39.71 3.18
2124 2949 3.650950 GCCTTGAGCCCCACCTCA 61.651 66.667 0.00 0.00 39.94 3.86
2165 2990 1.155390 TCGTCCAGTGAGGGGAACT 59.845 57.895 0.00 0.00 35.88 3.01
2172 2997 0.452287 CGTACACGTCGTCCAGTGAG 60.452 60.000 0.00 0.00 40.56 3.51
2547 3372 2.360726 CACTGCTCCATGCTGGCA 60.361 61.111 0.00 0.00 43.66 4.92
2550 3375 0.179137 CATTGCACTGCTCCATGCTG 60.179 55.000 1.98 0.00 42.55 4.41
2568 3393 1.978580 GTCCCCAGGAAGAAGAAGTCA 59.021 52.381 0.00 0.00 31.38 3.41
2625 3450 4.877619 TCGCCGTTGCCCAACCAA 62.878 61.111 5.64 0.00 38.03 3.67
2871 3696 0.394192 CATAATGGAGGCAGAGCGGA 59.606 55.000 0.00 0.00 0.00 5.54
3028 3872 6.861055 ACTTAAATTAATGTCAAGTGCGGTTG 59.139 34.615 8.16 0.00 0.00 3.77
3030 3874 6.569179 ACTTAAATTAATGTCAAGTGCGGT 57.431 33.333 8.16 0.00 0.00 5.68
3112 3956 6.048732 TCTCTGACCACTAACATGCAATAA 57.951 37.500 0.00 0.00 0.00 1.40
3113 3957 5.675684 TCTCTGACCACTAACATGCAATA 57.324 39.130 0.00 0.00 0.00 1.90
3156 4011 4.392445 AGACTCACGCTAGTACTACACAAG 59.608 45.833 0.00 0.00 0.00 3.16
3161 4016 4.942852 TCCTAGACTCACGCTAGTACTAC 58.057 47.826 0.00 0.00 34.82 2.73
3162 4017 4.648762 ACTCCTAGACTCACGCTAGTACTA 59.351 45.833 1.89 1.89 34.82 1.82
3163 4018 3.451902 ACTCCTAGACTCACGCTAGTACT 59.548 47.826 0.00 0.00 34.82 2.73
3187 4042 7.002879 AGAGTACTTGAACTACTCCACTAACA 58.997 38.462 0.00 0.00 40.71 2.41
3208 4063 6.615726 TCCCTACTATAATGAAAAGGCAGAGT 59.384 38.462 0.00 0.00 0.00 3.24
3257 4112 2.607187 CAGCTAACAACTACGGAGTGG 58.393 52.381 0.00 0.00 45.73 4.00
3258 4113 1.993370 GCAGCTAACAACTACGGAGTG 59.007 52.381 0.00 0.00 45.73 3.51
3260 4115 2.363788 TGCAGCTAACAACTACGGAG 57.636 50.000 0.00 0.00 0.00 4.63
3261 4116 2.028476 ACATGCAGCTAACAACTACGGA 60.028 45.455 0.00 0.00 0.00 4.69
3262 4117 2.094258 CACATGCAGCTAACAACTACGG 59.906 50.000 0.00 0.00 0.00 4.02
3263 4118 2.474526 GCACATGCAGCTAACAACTACG 60.475 50.000 0.00 0.00 41.59 3.51
3292 4147 0.661020 CACCACGACCAGACCAAAAC 59.339 55.000 0.00 0.00 0.00 2.43
3293 4148 0.253610 ACACCACGACCAGACCAAAA 59.746 50.000 0.00 0.00 0.00 2.44
3295 4150 1.046472 AGACACCACGACCAGACCAA 61.046 55.000 0.00 0.00 0.00 3.67
3296 4151 0.178984 TAGACACCACGACCAGACCA 60.179 55.000 0.00 0.00 0.00 4.02
3297 4152 0.526662 CTAGACACCACGACCAGACC 59.473 60.000 0.00 0.00 0.00 3.85
3298 4153 0.109226 GCTAGACACCACGACCAGAC 60.109 60.000 0.00 0.00 0.00 3.51
3299 4154 0.538746 TGCTAGACACCACGACCAGA 60.539 55.000 0.00 0.00 0.00 3.86
3300 4155 0.109086 CTGCTAGACACCACGACCAG 60.109 60.000 0.00 0.00 0.00 4.00
3301 4156 0.538746 TCTGCTAGACACCACGACCA 60.539 55.000 0.00 0.00 0.00 4.02
3302 4157 0.171455 CTCTGCTAGACACCACGACC 59.829 60.000 0.00 0.00 0.00 4.79
3303 4158 0.456995 GCTCTGCTAGACACCACGAC 60.457 60.000 0.00 0.00 0.00 4.34
3304 4159 1.883732 GCTCTGCTAGACACCACGA 59.116 57.895 0.00 0.00 0.00 4.35
3305 4160 1.515088 CGCTCTGCTAGACACCACG 60.515 63.158 0.00 0.00 0.00 4.94
3306 4161 0.457851 ATCGCTCTGCTAGACACCAC 59.542 55.000 0.00 0.00 0.00 4.16
3307 4162 1.135139 GAATCGCTCTGCTAGACACCA 59.865 52.381 0.00 0.00 0.00 4.17
3308 4163 1.407258 AGAATCGCTCTGCTAGACACC 59.593 52.381 0.00 0.00 31.12 4.16
3309 4164 2.861462 AGAATCGCTCTGCTAGACAC 57.139 50.000 0.00 0.00 31.12 3.67
3310 4165 2.292016 GCTAGAATCGCTCTGCTAGACA 59.708 50.000 0.00 0.00 35.41 3.41
3311 4166 2.292016 TGCTAGAATCGCTCTGCTAGAC 59.708 50.000 0.00 0.00 35.41 2.59
3312 4167 2.551887 CTGCTAGAATCGCTCTGCTAGA 59.448 50.000 0.00 0.00 35.41 2.43
3313 4168 2.551887 TCTGCTAGAATCGCTCTGCTAG 59.448 50.000 0.00 0.00 35.41 3.42
3314 4169 2.576615 TCTGCTAGAATCGCTCTGCTA 58.423 47.619 0.00 0.00 35.41 3.49
3315 4170 1.397672 TCTGCTAGAATCGCTCTGCT 58.602 50.000 0.00 0.00 35.41 4.24
3316 4171 2.215907 TTCTGCTAGAATCGCTCTGC 57.784 50.000 0.00 0.00 35.41 4.26
3317 4172 5.707931 TGATATTCTGCTAGAATCGCTCTG 58.292 41.667 12.69 0.00 40.75 3.35
3339 4194 5.613360 CGTGTTCAGCTATCAACTTGACTTG 60.613 44.000 0.00 0.00 0.00 3.16
3377 4232 0.174845 TCACTATTCCTCAACGGCCG 59.825 55.000 26.86 26.86 0.00 6.13
3380 4235 2.093973 ACTGCTCACTATTCCTCAACGG 60.094 50.000 0.00 0.00 0.00 4.44
3384 4239 3.306989 CCAACACTGCTCACTATTCCTCA 60.307 47.826 0.00 0.00 0.00 3.86
3386 4241 2.906389 TCCAACACTGCTCACTATTCCT 59.094 45.455 0.00 0.00 0.00 3.36
3388 4243 3.664107 TGTCCAACACTGCTCACTATTC 58.336 45.455 0.00 0.00 0.00 1.75
3389 4244 3.769739 TGTCCAACACTGCTCACTATT 57.230 42.857 0.00 0.00 0.00 1.73
3390 4245 3.988976 ATGTCCAACACTGCTCACTAT 57.011 42.857 0.00 0.00 0.00 2.12
3391 4246 3.195610 CCTATGTCCAACACTGCTCACTA 59.804 47.826 0.00 0.00 0.00 2.74
3392 4247 2.027745 CCTATGTCCAACACTGCTCACT 60.028 50.000 0.00 0.00 0.00 3.41
3393 4248 2.350522 CCTATGTCCAACACTGCTCAC 58.649 52.381 0.00 0.00 0.00 3.51
3394 4249 1.339055 GCCTATGTCCAACACTGCTCA 60.339 52.381 0.00 0.00 0.00 4.26
3395 4250 1.373570 GCCTATGTCCAACACTGCTC 58.626 55.000 0.00 0.00 0.00 4.26
3396 4251 0.391661 CGCCTATGTCCAACACTGCT 60.392 55.000 0.00 0.00 0.00 4.24
3397 4252 0.673644 ACGCCTATGTCCAACACTGC 60.674 55.000 0.00 0.00 0.00 4.40
3398 4253 2.268298 GTACGCCTATGTCCAACACTG 58.732 52.381 0.00 0.00 0.00 3.66
3399 4254 1.135199 CGTACGCCTATGTCCAACACT 60.135 52.381 0.52 0.00 0.00 3.55
3400 4255 1.274596 CGTACGCCTATGTCCAACAC 58.725 55.000 0.52 0.00 0.00 3.32
3401 4256 0.173935 CCGTACGCCTATGTCCAACA 59.826 55.000 10.49 0.00 0.00 3.33
3402 4257 0.529119 CCCGTACGCCTATGTCCAAC 60.529 60.000 10.49 0.00 0.00 3.77
3403 4258 1.817881 CCCGTACGCCTATGTCCAA 59.182 57.895 10.49 0.00 0.00 3.53
3404 4259 2.788640 GCCCGTACGCCTATGTCCA 61.789 63.158 10.49 0.00 0.00 4.02
3405 4260 2.028631 GCCCGTACGCCTATGTCC 59.971 66.667 10.49 0.00 0.00 4.02
3406 4261 0.944311 CATGCCCGTACGCCTATGTC 60.944 60.000 10.49 0.00 0.00 3.06
3407 4262 1.069090 CATGCCCGTACGCCTATGT 59.931 57.895 10.49 0.00 0.00 2.29
3408 4263 1.069090 ACATGCCCGTACGCCTATG 59.931 57.895 10.49 14.67 0.00 2.23
3409 4264 1.069090 CACATGCCCGTACGCCTAT 59.931 57.895 10.49 0.00 0.00 2.57
3410 4265 1.890625 AACACATGCCCGTACGCCTA 61.891 55.000 10.49 0.00 0.00 3.93
3411 4266 1.890625 TAACACATGCCCGTACGCCT 61.891 55.000 10.49 0.00 0.00 5.52
3412 4267 1.426041 CTAACACATGCCCGTACGCC 61.426 60.000 10.49 3.33 0.00 5.68
3444 4299 3.546724 GGCCCCTTTTCTCTCATTACTC 58.453 50.000 0.00 0.00 0.00 2.59
3453 4308 1.377333 CCTCACGGCCCCTTTTCTC 60.377 63.158 0.00 0.00 0.00 2.87
3532 4499 0.947244 GGTTGCCTCACACAACTCTG 59.053 55.000 6.59 0.00 45.34 3.35
3565 4532 9.220767 AGAATAATTTAGATACAAATCGCCTCC 57.779 33.333 0.00 0.00 37.19 4.30
3592 4591 7.857885 GGCATAATTCAGTTATACACTTGCTTC 59.142 37.037 0.00 0.00 33.79 3.86
3598 4597 7.229306 CACCATGGCATAATTCAGTTATACACT 59.771 37.037 13.04 0.00 35.35 3.55
3599 4598 7.013274 ACACCATGGCATAATTCAGTTATACAC 59.987 37.037 13.04 0.00 31.78 2.90
3600 4599 7.059788 ACACCATGGCATAATTCAGTTATACA 58.940 34.615 13.04 0.00 31.78 2.29
3910 4911 2.765807 ATCAGGACCAGCTCCCCG 60.766 66.667 0.00 0.00 40.53 5.73
3920 4921 0.827368 GACTGAGGGGTCATCAGGAC 59.173 60.000 13.02 4.54 46.89 3.85
3977 4978 1.071542 TCACCGGAGCAAATGTGAAGA 59.928 47.619 9.46 0.00 34.98 2.87
3978 4979 1.197721 GTCACCGGAGCAAATGTGAAG 59.802 52.381 9.46 0.00 39.26 3.02
4000 5005 3.021263 GGCCCCACCTACCACCAT 61.021 66.667 0.00 0.00 34.51 3.55
4018 5023 1.576421 CAAGAGACGCAAACTGGGC 59.424 57.895 0.00 0.00 33.10 5.36
4032 5037 1.374125 CATGTCGACCACGCCAAGA 60.374 57.895 14.12 0.00 39.58 3.02
4033 5038 3.027170 GCATGTCGACCACGCCAAG 62.027 63.158 14.12 0.00 39.58 3.61
4035 5040 3.932580 GAGCATGTCGACCACGCCA 62.933 63.158 14.12 0.00 39.58 5.69
4075 5080 2.818274 GGCCCCGACGACAACATC 60.818 66.667 0.00 0.00 0.00 3.06
4113 5118 4.740822 CCCGCCCCCTTCACCTTG 62.741 72.222 0.00 0.00 0.00 3.61
4149 5154 3.878519 CTCTCCGGCCTCGTCGAC 61.879 72.222 5.18 5.18 29.41 4.20
4233 5238 3.142174 CTCCTTGTCCTTGTTCCAAGAC 58.858 50.000 5.57 3.41 38.23 3.01
4235 5240 2.508526 CCTCCTTGTCCTTGTTCCAAG 58.491 52.381 0.00 0.00 36.26 3.61
4242 5247 1.376037 GACGCCCTCCTTGTCCTTG 60.376 63.158 0.00 0.00 0.00 3.61
4307 5334 3.819902 TCATCACACAGCACAATAGCAAA 59.180 39.130 0.00 0.00 36.85 3.68
4376 5407 7.919091 CAGTTGCAGCTTCAAAATGTGATATAT 59.081 33.333 0.00 0.00 35.70 0.86
4413 5444 7.661027 CCAAACATAACCATCTTTTCAACCAAT 59.339 33.333 0.00 0.00 0.00 3.16
4456 5488 5.411361 GCAGTGACATAAGACCATAACACAA 59.589 40.000 0.00 0.00 0.00 3.33
4458 5490 4.935205 TGCAGTGACATAAGACCATAACAC 59.065 41.667 0.00 0.00 0.00 3.32
4459 5491 5.159273 TGCAGTGACATAAGACCATAACA 57.841 39.130 0.00 0.00 0.00 2.41
4468 5500 2.417933 GTCAAGGCTGCAGTGACATAAG 59.582 50.000 23.79 5.70 41.09 1.73
4469 5501 2.038952 AGTCAAGGCTGCAGTGACATAA 59.961 45.455 27.89 4.49 43.34 1.90
4470 5502 1.625315 AGTCAAGGCTGCAGTGACATA 59.375 47.619 27.89 5.88 43.34 2.29
4471 5503 0.399454 AGTCAAGGCTGCAGTGACAT 59.601 50.000 27.89 15.72 43.34 3.06
4472 5504 1.001293 CTAGTCAAGGCTGCAGTGACA 59.999 52.381 27.89 17.21 43.34 3.58
4473 5505 1.719600 CTAGTCAAGGCTGCAGTGAC 58.280 55.000 22.12 22.12 41.62 3.67
4474 5506 0.036952 GCTAGTCAAGGCTGCAGTGA 60.037 55.000 16.64 8.57 0.00 3.41
4475 5507 0.321034 TGCTAGTCAAGGCTGCAGTG 60.321 55.000 16.64 5.99 0.00 3.66
4476 5508 0.321122 GTGCTAGTCAAGGCTGCAGT 60.321 55.000 16.64 0.00 34.15 4.40
4477 5509 0.321034 TGTGCTAGTCAAGGCTGCAG 60.321 55.000 10.11 10.11 34.15 4.41
4478 5510 0.603707 GTGTGCTAGTCAAGGCTGCA 60.604 55.000 0.50 0.00 0.00 4.41
4479 5511 0.321122 AGTGTGCTAGTCAAGGCTGC 60.321 55.000 0.00 0.00 0.00 5.25
4480 5512 2.175878 AAGTGTGCTAGTCAAGGCTG 57.824 50.000 0.00 0.00 0.00 4.85
4481 5513 2.158755 ACAAAGTGTGCTAGTCAAGGCT 60.159 45.455 0.00 0.00 0.00 4.58
4482 5514 2.222027 ACAAAGTGTGCTAGTCAAGGC 58.778 47.619 0.00 0.00 0.00 4.35
4483 5515 4.900635 AAACAAAGTGTGCTAGTCAAGG 57.099 40.909 0.00 0.00 0.00 3.61
4484 5516 5.163663 TGGAAAACAAAGTGTGCTAGTCAAG 60.164 40.000 0.00 0.00 0.00 3.02
4485 5517 4.702612 TGGAAAACAAAGTGTGCTAGTCAA 59.297 37.500 0.00 0.00 0.00 3.18
4486 5518 4.265893 TGGAAAACAAAGTGTGCTAGTCA 58.734 39.130 0.00 0.00 0.00 3.41
4487 5519 4.789802 GCTGGAAAACAAAGTGTGCTAGTC 60.790 45.833 0.00 0.00 0.00 2.59
4488 5520 3.066760 GCTGGAAAACAAAGTGTGCTAGT 59.933 43.478 0.00 0.00 0.00 2.57
4489 5521 3.316308 AGCTGGAAAACAAAGTGTGCTAG 59.684 43.478 0.00 0.00 0.00 3.42
4490 5522 3.287222 AGCTGGAAAACAAAGTGTGCTA 58.713 40.909 0.00 0.00 0.00 3.49
4491 5523 2.099756 GAGCTGGAAAACAAAGTGTGCT 59.900 45.455 0.00 0.00 0.00 4.40
4492 5524 2.159254 TGAGCTGGAAAACAAAGTGTGC 60.159 45.455 0.00 0.00 0.00 4.57
4493 5525 3.129287 AGTGAGCTGGAAAACAAAGTGTG 59.871 43.478 0.00 0.00 0.00 3.82
4494 5526 3.356290 AGTGAGCTGGAAAACAAAGTGT 58.644 40.909 0.00 0.00 0.00 3.55
4495 5527 4.576463 AGTAGTGAGCTGGAAAACAAAGTG 59.424 41.667 0.00 0.00 0.00 3.16
4496 5528 4.576463 CAGTAGTGAGCTGGAAAACAAAGT 59.424 41.667 0.00 0.00 0.00 2.66
4497 5529 4.555511 GCAGTAGTGAGCTGGAAAACAAAG 60.556 45.833 0.42 0.00 34.73 2.77
4507 5539 2.064762 GACAGTTGCAGTAGTGAGCTG 58.935 52.381 0.42 8.10 37.06 4.24
4554 5593 5.118990 ACATCATCTATTTGTGGACGAAGG 58.881 41.667 0.00 0.00 0.00 3.46
4582 5621 7.654568 ACGGCTTGCTAAAATTTTAACTTAGT 58.345 30.769 11.62 4.37 0.00 2.24
4587 5626 6.944557 ATGACGGCTTGCTAAAATTTTAAC 57.055 33.333 11.62 8.07 0.00 2.01
4588 5627 8.462811 TGATATGACGGCTTGCTAAAATTTTAA 58.537 29.630 11.62 0.00 0.00 1.52
4670 5709 6.753107 AGCAAAAACTAACAACTACTGTGT 57.247 33.333 0.00 0.00 38.67 3.72
4671 5710 8.556194 TCATAGCAAAAACTAACAACTACTGTG 58.444 33.333 0.00 0.00 38.67 3.66
4672 5711 8.671384 TCATAGCAAAAACTAACAACTACTGT 57.329 30.769 0.00 0.00 41.27 3.55
4673 5712 8.774586 ACTCATAGCAAAAACTAACAACTACTG 58.225 33.333 0.00 0.00 0.00 2.74
4674 5713 8.904099 ACTCATAGCAAAAACTAACAACTACT 57.096 30.769 0.00 0.00 0.00 2.57
4677 5716 7.041098 CCAGACTCATAGCAAAAACTAACAACT 60.041 37.037 0.00 0.00 0.00 3.16
4679 5718 6.770785 ACCAGACTCATAGCAAAAACTAACAA 59.229 34.615 0.00 0.00 0.00 2.83
4680 5719 6.296026 ACCAGACTCATAGCAAAAACTAACA 58.704 36.000 0.00 0.00 0.00 2.41
4681 5720 6.128254 GGACCAGACTCATAGCAAAAACTAAC 60.128 42.308 0.00 0.00 0.00 2.34
4682 5721 5.938125 GGACCAGACTCATAGCAAAAACTAA 59.062 40.000 0.00 0.00 0.00 2.24
4683 5722 5.012664 TGGACCAGACTCATAGCAAAAACTA 59.987 40.000 0.00 0.00 0.00 2.24
4684 5723 4.202461 TGGACCAGACTCATAGCAAAAACT 60.202 41.667 0.00 0.00 0.00 2.66
4685 5724 4.072131 TGGACCAGACTCATAGCAAAAAC 58.928 43.478 0.00 0.00 0.00 2.43
4686 5725 4.365514 TGGACCAGACTCATAGCAAAAA 57.634 40.909 0.00 0.00 0.00 1.94
4687 5726 4.072131 GTTGGACCAGACTCATAGCAAAA 58.928 43.478 0.00 0.00 0.00 2.44
4688 5727 3.327757 AGTTGGACCAGACTCATAGCAAA 59.672 43.478 0.00 0.00 0.00 3.68
4689 5728 2.906389 AGTTGGACCAGACTCATAGCAA 59.094 45.455 0.00 0.00 0.00 3.91
4698 5737 8.903820 AGCATAATATTTTAAGTTGGACCAGAC 58.096 33.333 0.00 0.00 0.00 3.51
4716 5755 8.205131 GGTTTCCGAAGTTAGAAAGCATAATA 57.795 34.615 18.31 0.00 45.36 0.98
4717 5756 7.085052 GGTTTCCGAAGTTAGAAAGCATAAT 57.915 36.000 18.31 0.00 45.36 1.28
4718 5757 6.490566 GGTTTCCGAAGTTAGAAAGCATAA 57.509 37.500 18.31 0.00 45.36 1.90
4723 5762 5.049612 GGACAAGGTTTCCGAAGTTAGAAAG 60.050 44.000 1.71 0.00 32.86 2.62
4724 5763 4.818005 GGACAAGGTTTCCGAAGTTAGAAA 59.182 41.667 0.00 0.00 0.00 2.52
4727 5766 3.735591 TGGACAAGGTTTCCGAAGTTAG 58.264 45.455 0.00 0.00 35.70 2.34
4728 5767 3.842007 TGGACAAGGTTTCCGAAGTTA 57.158 42.857 0.00 0.00 35.70 2.24
4729 5768 2.721425 TGGACAAGGTTTCCGAAGTT 57.279 45.000 0.00 0.00 35.70 2.66
4731 5770 1.266989 GCTTGGACAAGGTTTCCGAAG 59.733 52.381 13.41 0.00 38.80 3.79
4732 5771 1.133915 AGCTTGGACAAGGTTTCCGAA 60.134 47.619 10.68 0.00 45.80 4.30
4734 5773 0.593128 CAGCTTGGACAAGGTTTCCG 59.407 55.000 13.52 0.20 45.80 4.30
4735 5774 0.961753 CCAGCTTGGACAAGGTTTCC 59.038 55.000 13.52 0.00 45.80 3.13
4736 5775 0.961753 CCCAGCTTGGACAAGGTTTC 59.038 55.000 13.52 0.00 45.80 2.78
4737 5776 0.261696 ACCCAGCTTGGACAAGGTTT 59.738 50.000 11.55 0.00 45.80 3.27
4742 5802 0.467290 GTTCCACCCAGCTTGGACAA 60.467 55.000 11.55 0.00 43.10 3.18
4749 5809 2.031870 GTTTTTGAGTTCCACCCAGCT 58.968 47.619 0.00 0.00 0.00 4.24
4774 5834 6.518493 TCGTCCCATAATATAAGAGCGTTTT 58.482 36.000 0.00 0.00 0.00 2.43
4775 5835 6.092955 TCGTCCCATAATATAAGAGCGTTT 57.907 37.500 0.00 0.00 0.00 3.60
4777 5837 5.336531 CCTTCGTCCCATAATATAAGAGCGT 60.337 44.000 0.00 0.00 0.00 5.07
4778 5838 5.103000 CCTTCGTCCCATAATATAAGAGCG 58.897 45.833 0.00 0.00 0.00 5.03
4779 5839 6.282199 TCCTTCGTCCCATAATATAAGAGC 57.718 41.667 0.00 0.00 0.00 4.09
4780 5840 7.897864 ACTTCCTTCGTCCCATAATATAAGAG 58.102 38.462 0.00 0.00 0.00 2.85
4782 5842 8.904099 AAACTTCCTTCGTCCCATAATATAAG 57.096 34.615 0.00 0.00 0.00 1.73
4785 5845 8.030913 AGTAAACTTCCTTCGTCCCATAATAT 57.969 34.615 0.00 0.00 0.00 1.28
4786 5846 7.418254 GGAGTAAACTTCCTTCGTCCCATAATA 60.418 40.741 0.00 0.00 0.00 0.98
4789 5849 4.161001 GGAGTAAACTTCCTTCGTCCCATA 59.839 45.833 0.00 0.00 0.00 2.74
4790 5850 3.055312 GGAGTAAACTTCCTTCGTCCCAT 60.055 47.826 0.00 0.00 0.00 4.00
4791 5851 2.301009 GGAGTAAACTTCCTTCGTCCCA 59.699 50.000 0.00 0.00 0.00 4.37
4792 5852 2.354503 GGGAGTAAACTTCCTTCGTCCC 60.355 54.545 0.00 0.00 38.66 4.46
4793 5853 2.301009 TGGGAGTAAACTTCCTTCGTCC 59.699 50.000 8.90 0.00 42.41 4.79
4794 5854 3.672767 TGGGAGTAAACTTCCTTCGTC 57.327 47.619 8.90 0.00 42.41 4.20
4795 5855 4.576879 GATTGGGAGTAAACTTCCTTCGT 58.423 43.478 8.90 0.00 42.41 3.85
4796 5856 3.617263 CGATTGGGAGTAAACTTCCTTCG 59.383 47.826 14.70 14.70 42.41 3.79
4797 5857 3.939592 CCGATTGGGAGTAAACTTCCTTC 59.060 47.826 8.90 5.24 42.41 3.46
4798 5858 3.329814 ACCGATTGGGAGTAAACTTCCTT 59.670 43.478 8.90 0.00 42.41 3.36
4799 5859 2.910977 ACCGATTGGGAGTAAACTTCCT 59.089 45.455 8.90 0.00 42.41 3.36
4800 5860 3.345508 ACCGATTGGGAGTAAACTTCC 57.654 47.619 3.39 0.00 42.26 3.46
4801 5861 3.370061 CGAACCGATTGGGAGTAAACTTC 59.630 47.826 3.39 0.00 40.75 3.01
4802 5862 3.332034 CGAACCGATTGGGAGTAAACTT 58.668 45.455 3.39 0.00 40.75 2.66
4803 5863 2.933928 GCGAACCGATTGGGAGTAAACT 60.934 50.000 3.39 0.00 40.75 2.66
4804 5864 1.395954 GCGAACCGATTGGGAGTAAAC 59.604 52.381 3.39 0.00 40.75 2.01
4805 5865 1.002201 TGCGAACCGATTGGGAGTAAA 59.998 47.619 3.39 0.00 40.75 2.01
4806 5866 0.609151 TGCGAACCGATTGGGAGTAA 59.391 50.000 3.39 0.00 40.75 2.24
4807 5867 0.828022 ATGCGAACCGATTGGGAGTA 59.172 50.000 3.39 0.00 40.75 2.59
4808 5868 0.744414 CATGCGAACCGATTGGGAGT 60.744 55.000 3.39 0.00 40.75 3.85
4809 5869 1.439353 CCATGCGAACCGATTGGGAG 61.439 60.000 3.39 0.00 40.75 4.30
4810 5870 1.451207 CCATGCGAACCGATTGGGA 60.451 57.895 3.39 0.00 40.75 4.37
4811 5871 3.110139 CCATGCGAACCGATTGGG 58.890 61.111 3.39 0.00 40.75 4.12
4812 5872 0.813610 TAGCCATGCGAACCGATTGG 60.814 55.000 0.00 0.00 42.84 3.16
4813 5873 1.013596 TTAGCCATGCGAACCGATTG 58.986 50.000 0.00 0.00 0.00 2.67
4814 5874 1.014352 GTTAGCCATGCGAACCGATT 58.986 50.000 1.25 0.00 38.01 3.34
4815 5875 0.178068 AGTTAGCCATGCGAACCGAT 59.822 50.000 8.18 0.00 43.29 4.18
4816 5876 0.459585 GAGTTAGCCATGCGAACCGA 60.460 55.000 8.18 0.00 43.29 4.69
4817 5877 0.739462 TGAGTTAGCCATGCGAACCG 60.739 55.000 8.18 0.00 43.29 4.44
4818 5878 0.727398 GTGAGTTAGCCATGCGAACC 59.273 55.000 8.18 2.29 43.29 3.62
4822 5882 1.863454 GAGATGTGAGTTAGCCATGCG 59.137 52.381 0.00 0.00 0.00 4.73
4826 5886 1.893137 ACGTGAGATGTGAGTTAGCCA 59.107 47.619 0.00 0.00 0.00 4.75
4853 5913 8.527810 AGACAAGGACAAAACAAGAACAAAATA 58.472 29.630 0.00 0.00 0.00 1.40
4856 5916 6.339587 AGACAAGGACAAAACAAGAACAAA 57.660 33.333 0.00 0.00 0.00 2.83
4857 5917 5.975693 AGACAAGGACAAAACAAGAACAA 57.024 34.783 0.00 0.00 0.00 2.83
4874 5934 4.496507 CGCGTCTATGATGAGAGAAGACAA 60.497 45.833 0.00 0.00 37.09 3.18
5102 6330 3.622166 TCTTATTCCTTTCACGACCCC 57.378 47.619 0.00 0.00 0.00 4.95
5118 6346 1.296056 GCTTCCGCTGGCGTTTCTTA 61.296 55.000 13.84 0.00 37.81 2.10
5174 6402 3.282021 CACCAGGTACCATGGAAATCAG 58.718 50.000 27.37 5.37 40.51 2.90
5222 6450 1.519455 CAAGATGTCCTCGCCGTCC 60.519 63.158 0.00 0.00 0.00 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.