Multiple sequence alignment - TraesCS1D01G442100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G442100 chr1D 100.000 3440 0 0 1 3440 486765986 486762547 0.000000e+00 6353.0
1 TraesCS1D01G442100 chr1D 97.927 193 3 1 1 192 326666736 326666544 1.980000e-87 333.0
2 TraesCS1D01G442100 chr1D 97.396 192 5 0 1 192 146075371 146075180 9.210000e-86 327.0
3 TraesCS1D01G442100 chr1D 86.325 117 12 3 2689 2803 134075887 134076001 1.300000e-24 124.0
4 TraesCS1D01G442100 chr1D 77.914 163 36 0 366 528 244308892 244308730 6.070000e-18 102.0
5 TraesCS1D01G442100 chr1D 97.561 41 1 0 322 362 486765249 486765209 1.710000e-08 71.3
6 TraesCS1D01G442100 chr1D 97.561 41 1 0 738 778 486765665 486765625 1.710000e-08 71.3
7 TraesCS1D01G442100 chr1A 93.810 1874 63 19 673 2541 584375339 584373514 0.000000e+00 2769.0
8 TraesCS1D01G442100 chr1A 79.907 428 48 17 221 635 584414257 584413855 2.610000e-71 279.0
9 TraesCS1D01G442100 chr1A 97.561 41 1 0 322 362 584375284 584375244 1.710000e-08 71.3
10 TraesCS1D01G442100 chr1B 91.706 1905 75 34 685 2545 677915421 677913556 0.000000e+00 2566.0
11 TraesCS1D01G442100 chr1B 85.986 421 49 8 2390 2807 677912278 677911865 3.150000e-120 442.0
12 TraesCS1D01G442100 chr1B 85.455 110 16 0 400 509 222663742 222663851 7.800000e-22 115.0
13 TraesCS1D01G442100 chr1B 97.561 41 1 0 322 362 677915368 677915328 1.710000e-08 71.3
14 TraesCS1D01G442100 chr1B 100.000 29 0 0 1197 1225 388855234 388855262 2.000000e-03 54.7
15 TraesCS1D01G442100 chr7B 85.060 502 44 16 2964 3439 519303710 519304206 1.860000e-132 483.0
16 TraesCS1D01G442100 chr7B 81.191 319 55 2 2805 3123 725717171 725717484 5.700000e-63 252.0
17 TraesCS1D01G442100 chr7B 80.878 319 56 4 2805 3123 725709146 725709459 2.650000e-61 246.0
18 TraesCS1D01G442100 chr7A 90.419 334 28 1 3107 3440 52333002 52332673 1.470000e-118 436.0
19 TraesCS1D01G442100 chr7A 89.820 334 30 1 3107 3440 52347717 52347388 3.170000e-115 425.0
20 TraesCS1D01G442100 chr7A 78.638 323 56 11 2805 3123 721508430 721508743 5.820000e-48 202.0
21 TraesCS1D01G442100 chr7A 74.499 349 68 17 187 528 421449199 421448865 7.750000e-27 132.0
22 TraesCS1D01G442100 chr7A 83.810 105 13 4 2689 2791 30686767 30686869 2.830000e-16 97.1
23 TraesCS1D01G442100 chr7D 90.000 340 26 5 3106 3440 74584680 74584344 1.900000e-117 433.0
24 TraesCS1D01G442100 chr7D 80.519 308 50 6 2821 3125 138360034 138360334 9.600000e-56 228.0
25 TraesCS1D01G442100 chr2B 90.654 321 26 2 3119 3439 786919472 786919156 1.140000e-114 424.0
26 TraesCS1D01G442100 chr2B 90.654 321 26 2 3119 3439 786962502 786962186 1.140000e-114 424.0
27 TraesCS1D01G442100 chr2B 87.395 119 13 2 412 528 413431691 413431573 5.990000e-28 135.0
28 TraesCS1D01G442100 chr4D 88.791 339 29 3 3107 3439 38144158 38144493 1.150000e-109 407.0
29 TraesCS1D01G442100 chr4D 97.396 192 5 0 1 192 8489404 8489213 9.210000e-86 327.0
30 TraesCS1D01G442100 chr4D 97.396 192 5 0 1 192 436806844 436806653 9.210000e-86 327.0
31 TraesCS1D01G442100 chr4D 83.019 106 13 4 2689 2791 341230161 341230264 1.310000e-14 91.6
32 TraesCS1D01G442100 chr6B 89.597 298 28 2 3106 3403 78199679 78199385 3.240000e-100 375.0
33 TraesCS1D01G442100 chr4A 87.349 332 29 8 3107 3432 598857083 598857407 5.420000e-98 368.0
34 TraesCS1D01G442100 chr4A 76.660 467 79 24 2810 3261 598856741 598857192 7.420000e-57 231.0
35 TraesCS1D01G442100 chr4A 84.034 119 17 2 2689 2807 293860766 293860650 2.810000e-21 113.0
36 TraesCS1D01G442100 chr4A 84.404 109 15 2 417 524 441284172 441284065 4.700000e-19 106.0
37 TraesCS1D01G442100 chr5D 97.917 192 4 0 1 192 519607330 519607139 1.980000e-87 333.0
38 TraesCS1D01G442100 chr5D 97.396 192 5 0 1 192 115330889 115331080 9.210000e-86 327.0
39 TraesCS1D01G442100 chr5D 97.396 192 5 0 1 192 190882907 190882716 9.210000e-86 327.0
40 TraesCS1D01G442100 chr5D 97.396 192 5 0 1 192 203299655 203299464 9.210000e-86 327.0
41 TraesCS1D01G442100 chr5D 77.301 163 37 0 366 528 241490789 241490951 2.830000e-16 97.1
42 TraesCS1D01G442100 chr2D 97.917 192 4 0 1 192 68003425 68003616 1.980000e-87 333.0
43 TraesCS1D01G442100 chr2D 84.874 119 17 1 2689 2807 245854291 245854174 6.030000e-23 119.0
44 TraesCS1D01G442100 chr2A 83.871 310 43 6 2805 3113 16387954 16387651 4.340000e-74 289.0
45 TraesCS1D01G442100 chr2A 85.294 136 17 3 395 528 690714135 690714001 1.660000e-28 137.0
46 TraesCS1D01G442100 chr2A 76.538 260 52 6 252 509 461941939 461942191 2.150000e-27 134.0
47 TraesCS1D01G442100 chrUn 80.251 319 57 5 2805 3123 87823833 87824145 5.740000e-58 235.0
48 TraesCS1D01G442100 chrUn 80.251 319 57 5 2805 3123 250789609 250789921 5.740000e-58 235.0
49 TraesCS1D01G442100 chrUn 80.251 319 57 5 2805 3123 371847569 371847881 5.740000e-58 235.0
50 TraesCS1D01G442100 chrUn 84.874 119 16 2 2689 2807 82914242 82914126 6.030000e-23 119.0
51 TraesCS1D01G442100 chr6A 87.931 116 14 0 2689 2804 488072265 488072150 1.660000e-28 137.0
52 TraesCS1D01G442100 chr3A 80.741 135 17 9 2689 2819 550707822 550707693 2.830000e-16 97.1
53 TraesCS1D01G442100 chr3A 78.431 153 24 9 370 517 123546128 123546276 1.310000e-14 91.6
54 TraesCS1D01G442100 chr5A 92.308 65 5 0 3375 3439 184315946 184315882 3.660000e-15 93.5
55 TraesCS1D01G442100 chr6D 81.308 107 19 1 423 528 230957119 230957225 6.120000e-13 86.1
56 TraesCS1D01G442100 chr3D 78.030 132 25 4 187 315 411876932 411876802 2.850000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G442100 chr1D 486762547 486765986 3439 True 2165.200000 6353 98.3740 1 3440 3 chr1D.!!$R4 3439
1 TraesCS1D01G442100 chr1A 584373514 584375339 1825 True 1420.150000 2769 95.6855 322 2541 2 chr1A.!!$R2 2219
2 TraesCS1D01G442100 chr1B 677911865 677915421 3556 True 1026.433333 2566 91.7510 322 2807 3 chr1B.!!$R1 2485
3 TraesCS1D01G442100 chr4A 598856741 598857407 666 False 299.500000 368 82.0045 2810 3432 2 chr4A.!!$F1 622

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
619 620 0.030235 CCGTCGTATGCTCGGAATGA 59.970 55.0 11.24 0.0 46.05 2.57 F
887 896 0.106149 ACAGGGTCCACTTGTCGAAC 59.894 55.0 0.00 0.0 0.00 3.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1984 2039 0.111061 TGGTGCCTTTCTGTGCATCT 59.889 50.0 0.00 0.0 39.36 2.90 R
2864 4357 0.163360 CGCCGTACTAGTAGCTAGCG 59.837 60.0 9.55 16.5 37.57 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.367646 TCGAGGTAGATCAACTCCTGT 57.632 47.619 0.00 0.00 0.00 4.00
21 22 4.498894 TCGAGGTAGATCAACTCCTGTA 57.501 45.455 0.00 0.00 0.00 2.74
22 23 4.851843 TCGAGGTAGATCAACTCCTGTAA 58.148 43.478 0.00 0.00 0.00 2.41
23 24 4.639310 TCGAGGTAGATCAACTCCTGTAAC 59.361 45.833 0.00 0.00 0.00 2.50
24 25 4.202030 CGAGGTAGATCAACTCCTGTAACC 60.202 50.000 0.00 0.00 0.00 2.85
25 26 4.031611 AGGTAGATCAACTCCTGTAACCC 58.968 47.826 0.00 0.00 0.00 4.11
26 27 4.031611 GGTAGATCAACTCCTGTAACCCT 58.968 47.826 0.00 0.00 0.00 4.34
27 28 5.043582 AGGTAGATCAACTCCTGTAACCCTA 60.044 44.000 0.00 0.00 0.00 3.53
28 29 5.839606 GGTAGATCAACTCCTGTAACCCTAT 59.160 44.000 0.00 0.00 0.00 2.57
29 30 7.008941 GGTAGATCAACTCCTGTAACCCTATA 58.991 42.308 0.00 0.00 0.00 1.31
30 31 7.674772 GGTAGATCAACTCCTGTAACCCTATAT 59.325 40.741 0.00 0.00 0.00 0.86
31 32 9.091220 GTAGATCAACTCCTGTAACCCTATATT 57.909 37.037 0.00 0.00 0.00 1.28
32 33 8.196378 AGATCAACTCCTGTAACCCTATATTC 57.804 38.462 0.00 0.00 0.00 1.75
33 34 7.789831 AGATCAACTCCTGTAACCCTATATTCA 59.210 37.037 0.00 0.00 0.00 2.57
34 35 7.931015 TCAACTCCTGTAACCCTATATTCAT 57.069 36.000 0.00 0.00 0.00 2.57
35 36 7.963532 TCAACTCCTGTAACCCTATATTCATC 58.036 38.462 0.00 0.00 0.00 2.92
36 37 7.567250 TCAACTCCTGTAACCCTATATTCATCA 59.433 37.037 0.00 0.00 0.00 3.07
37 38 7.931015 ACTCCTGTAACCCTATATTCATCAA 57.069 36.000 0.00 0.00 0.00 2.57
38 39 7.967908 ACTCCTGTAACCCTATATTCATCAAG 58.032 38.462 0.00 0.00 0.00 3.02
39 40 7.789831 ACTCCTGTAACCCTATATTCATCAAGA 59.210 37.037 0.00 0.00 0.00 3.02
40 41 8.742125 TCCTGTAACCCTATATTCATCAAGAT 57.258 34.615 0.00 0.00 0.00 2.40
41 42 8.816894 TCCTGTAACCCTATATTCATCAAGATC 58.183 37.037 0.00 0.00 0.00 2.75
42 43 8.597167 CCTGTAACCCTATATTCATCAAGATCA 58.403 37.037 0.00 0.00 0.00 2.92
48 49 9.736414 ACCCTATATTCATCAAGATCAATCAAG 57.264 33.333 0.00 0.00 0.00 3.02
49 50 8.675504 CCCTATATTCATCAAGATCAATCAAGC 58.324 37.037 0.00 0.00 0.00 4.01
50 51 9.227777 CCTATATTCATCAAGATCAATCAAGCA 57.772 33.333 0.00 0.00 0.00 3.91
52 53 5.830000 TTCATCAAGATCAATCAAGCAGG 57.170 39.130 0.00 0.00 0.00 4.85
53 54 5.106876 TCATCAAGATCAATCAAGCAGGA 57.893 39.130 0.00 0.00 0.00 3.86
54 55 5.503002 TCATCAAGATCAATCAAGCAGGAA 58.497 37.500 0.00 0.00 0.00 3.36
55 56 5.589050 TCATCAAGATCAATCAAGCAGGAAG 59.411 40.000 0.00 0.00 0.00 3.46
56 57 4.914983 TCAAGATCAATCAAGCAGGAAGT 58.085 39.130 0.00 0.00 0.00 3.01
57 58 6.053632 TCAAGATCAATCAAGCAGGAAGTA 57.946 37.500 0.00 0.00 0.00 2.24
58 59 6.111382 TCAAGATCAATCAAGCAGGAAGTAG 58.889 40.000 0.00 0.00 0.00 2.57
59 60 5.033589 AGATCAATCAAGCAGGAAGTAGG 57.966 43.478 0.00 0.00 0.00 3.18
60 61 3.634397 TCAATCAAGCAGGAAGTAGGG 57.366 47.619 0.00 0.00 0.00 3.53
61 62 2.912956 TCAATCAAGCAGGAAGTAGGGT 59.087 45.455 0.00 0.00 0.00 4.34
62 63 4.101114 TCAATCAAGCAGGAAGTAGGGTA 58.899 43.478 0.00 0.00 0.00 3.69
63 64 4.721776 TCAATCAAGCAGGAAGTAGGGTAT 59.278 41.667 0.00 0.00 0.00 2.73
64 65 5.191722 TCAATCAAGCAGGAAGTAGGGTATT 59.808 40.000 0.00 0.00 0.00 1.89
65 66 6.385759 TCAATCAAGCAGGAAGTAGGGTATTA 59.614 38.462 0.00 0.00 0.00 0.98
66 67 5.609533 TCAAGCAGGAAGTAGGGTATTAC 57.390 43.478 0.00 0.00 0.00 1.89
67 68 4.407945 TCAAGCAGGAAGTAGGGTATTACC 59.592 45.833 4.11 4.11 37.60 2.85
68 69 4.282292 AGCAGGAAGTAGGGTATTACCT 57.718 45.455 12.54 2.07 44.75 3.08
69 70 4.224762 AGCAGGAAGTAGGGTATTACCTC 58.775 47.826 12.54 2.11 42.09 3.85
70 71 3.005578 GCAGGAAGTAGGGTATTACCTCG 59.994 52.174 12.54 0.00 42.09 4.63
71 72 4.467769 CAGGAAGTAGGGTATTACCTCGA 58.532 47.826 12.54 0.00 42.09 4.04
72 73 5.078256 CAGGAAGTAGGGTATTACCTCGAT 58.922 45.833 12.54 0.29 42.09 3.59
73 74 6.243900 CAGGAAGTAGGGTATTACCTCGATA 58.756 44.000 12.54 0.00 42.09 2.92
74 75 6.374894 CAGGAAGTAGGGTATTACCTCGATAG 59.625 46.154 12.54 0.00 42.09 2.08
75 76 6.274200 AGGAAGTAGGGTATTACCTCGATAGA 59.726 42.308 12.54 0.00 42.09 1.98
85 86 3.247724 TCGATAGAGAGGGCCCGA 58.752 61.111 18.44 3.91 42.67 5.14
86 87 1.535190 TCGATAGAGAGGGCCCGAA 59.465 57.895 18.44 0.98 42.67 4.30
87 88 0.822532 TCGATAGAGAGGGCCCGAAC 60.823 60.000 18.44 12.45 42.67 3.95
88 89 1.807495 CGATAGAGAGGGCCCGAACC 61.807 65.000 18.44 7.31 39.76 3.62
89 90 0.470268 GATAGAGAGGGCCCGAACCT 60.470 60.000 18.44 14.71 42.18 3.50
90 91 0.760945 ATAGAGAGGGCCCGAACCTG 60.761 60.000 18.44 0.00 38.79 4.00
91 92 2.873557 TAGAGAGGGCCCGAACCTGG 62.874 65.000 18.44 0.00 38.79 4.45
99 100 3.970205 CCCGAACCTGGGTAAACAT 57.030 52.632 0.00 0.00 44.76 2.71
100 101 1.746470 CCCGAACCTGGGTAAACATC 58.254 55.000 0.00 0.00 44.76 3.06
101 102 1.365699 CCGAACCTGGGTAAACATCG 58.634 55.000 0.00 4.42 0.00 3.84
102 103 1.338389 CCGAACCTGGGTAAACATCGT 60.338 52.381 0.00 0.00 0.00 3.73
103 104 1.730064 CGAACCTGGGTAAACATCGTG 59.270 52.381 0.00 0.00 0.00 4.35
104 105 2.774687 GAACCTGGGTAAACATCGTGT 58.225 47.619 0.00 0.00 0.00 4.49
105 106 2.467566 ACCTGGGTAAACATCGTGTC 57.532 50.000 0.00 0.00 0.00 3.67
106 107 1.002773 ACCTGGGTAAACATCGTGTCC 59.997 52.381 0.00 0.00 0.00 4.02
107 108 1.677820 CCTGGGTAAACATCGTGTCCC 60.678 57.143 0.00 0.00 35.85 4.46
108 109 0.325602 TGGGTAAACATCGTGTCCCC 59.674 55.000 9.39 10.06 34.88 4.81
109 110 0.616891 GGGTAAACATCGTGTCCCCT 59.383 55.000 10.47 0.00 32.86 4.79
110 111 1.677820 GGGTAAACATCGTGTCCCCTG 60.678 57.143 10.47 0.00 32.86 4.45
111 112 1.002773 GGTAAACATCGTGTCCCCTGT 59.997 52.381 0.00 0.00 0.00 4.00
112 113 2.344025 GTAAACATCGTGTCCCCTGTC 58.656 52.381 0.00 0.00 0.00 3.51
113 114 1.056660 AAACATCGTGTCCCCTGTCT 58.943 50.000 0.00 0.00 0.00 3.41
114 115 0.608640 AACATCGTGTCCCCTGTCTC 59.391 55.000 0.00 0.00 0.00 3.36
115 116 1.258445 ACATCGTGTCCCCTGTCTCC 61.258 60.000 0.00 0.00 0.00 3.71
116 117 0.972983 CATCGTGTCCCCTGTCTCCT 60.973 60.000 0.00 0.00 0.00 3.69
117 118 0.972983 ATCGTGTCCCCTGTCTCCTG 60.973 60.000 0.00 0.00 0.00 3.86
118 119 1.908793 CGTGTCCCCTGTCTCCTGT 60.909 63.158 0.00 0.00 0.00 4.00
119 120 1.472662 CGTGTCCCCTGTCTCCTGTT 61.473 60.000 0.00 0.00 0.00 3.16
120 121 1.640917 GTGTCCCCTGTCTCCTGTTA 58.359 55.000 0.00 0.00 0.00 2.41
121 122 1.275573 GTGTCCCCTGTCTCCTGTTAC 59.724 57.143 0.00 0.00 0.00 2.50
122 123 0.903236 GTCCCCTGTCTCCTGTTACC 59.097 60.000 0.00 0.00 0.00 2.85
123 124 0.252558 TCCCCTGTCTCCTGTTACCC 60.253 60.000 0.00 0.00 0.00 3.69
124 125 0.546747 CCCCTGTCTCCTGTTACCCA 60.547 60.000 0.00 0.00 0.00 4.51
125 126 1.584724 CCCTGTCTCCTGTTACCCAT 58.415 55.000 0.00 0.00 0.00 4.00
126 127 1.486726 CCCTGTCTCCTGTTACCCATC 59.513 57.143 0.00 0.00 0.00 3.51
127 128 1.137086 CCTGTCTCCTGTTACCCATCG 59.863 57.143 0.00 0.00 0.00 3.84
128 129 2.100197 CTGTCTCCTGTTACCCATCGA 58.900 52.381 0.00 0.00 0.00 3.59
129 130 2.695666 CTGTCTCCTGTTACCCATCGAT 59.304 50.000 0.00 0.00 0.00 3.59
130 131 2.693591 TGTCTCCTGTTACCCATCGATC 59.306 50.000 0.00 0.00 0.00 3.69
131 132 2.036089 GTCTCCTGTTACCCATCGATCC 59.964 54.545 0.00 0.00 0.00 3.36
132 133 2.039418 CTCCTGTTACCCATCGATCCA 58.961 52.381 0.00 0.00 0.00 3.41
133 134 2.634940 CTCCTGTTACCCATCGATCCAT 59.365 50.000 0.00 0.00 0.00 3.41
134 135 2.368548 TCCTGTTACCCATCGATCCATG 59.631 50.000 0.00 0.00 0.00 3.66
135 136 2.368548 CCTGTTACCCATCGATCCATGA 59.631 50.000 1.38 0.00 0.00 3.07
136 137 3.008375 CCTGTTACCCATCGATCCATGAT 59.992 47.826 1.38 0.00 0.00 2.45
137 138 4.248859 CTGTTACCCATCGATCCATGATC 58.751 47.826 1.38 0.00 35.88 2.92
138 139 3.007940 TGTTACCCATCGATCCATGATCC 59.992 47.826 1.38 0.00 35.83 3.36
139 140 1.733385 ACCCATCGATCCATGATCCA 58.267 50.000 1.38 0.00 35.83 3.41
140 141 1.349026 ACCCATCGATCCATGATCCAC 59.651 52.381 1.38 0.00 35.83 4.02
141 142 1.348696 CCCATCGATCCATGATCCACA 59.651 52.381 1.38 0.00 35.83 4.17
142 143 2.614734 CCCATCGATCCATGATCCACAG 60.615 54.545 1.38 0.00 35.83 3.66
143 144 2.074576 CATCGATCCATGATCCACAGC 58.925 52.381 0.00 0.00 35.83 4.40
144 145 1.417288 TCGATCCATGATCCACAGCT 58.583 50.000 0.00 0.00 35.83 4.24
145 146 1.764723 TCGATCCATGATCCACAGCTT 59.235 47.619 0.00 0.00 35.83 3.74
146 147 1.871676 CGATCCATGATCCACAGCTTG 59.128 52.381 0.00 0.00 35.83 4.01
155 156 2.846532 CACAGCTTGGAACCCCCT 59.153 61.111 0.00 0.00 35.38 4.79
156 157 2.074967 CACAGCTTGGAACCCCCTA 58.925 57.895 0.00 0.00 35.38 3.53
157 158 0.322546 CACAGCTTGGAACCCCCTAC 60.323 60.000 0.00 0.00 35.38 3.18
158 159 1.303282 CAGCTTGGAACCCCCTACC 59.697 63.158 0.00 0.00 35.38 3.18
159 160 1.929088 AGCTTGGAACCCCCTACCC 60.929 63.158 0.00 0.00 35.38 3.69
160 161 2.995547 CTTGGAACCCCCTACCCG 59.004 66.667 0.00 0.00 35.38 5.28
161 162 1.614226 CTTGGAACCCCCTACCCGA 60.614 63.158 0.00 0.00 35.38 5.14
162 163 1.614226 TTGGAACCCCCTACCCGAG 60.614 63.158 0.00 0.00 35.38 4.63
163 164 2.109494 TTGGAACCCCCTACCCGAGA 62.109 60.000 0.00 0.00 35.38 4.04
164 165 1.074699 GGAACCCCCTACCCGAGAT 60.075 63.158 0.00 0.00 0.00 2.75
165 166 1.120184 GGAACCCCCTACCCGAGATC 61.120 65.000 0.00 0.00 0.00 2.75
166 167 0.105607 GAACCCCCTACCCGAGATCT 60.106 60.000 0.00 0.00 0.00 2.75
167 168 0.398664 AACCCCCTACCCGAGATCTG 60.399 60.000 0.00 0.00 0.00 2.90
168 169 2.210711 CCCCCTACCCGAGATCTGC 61.211 68.421 0.00 0.00 0.00 4.26
169 170 2.210711 CCCCTACCCGAGATCTGCC 61.211 68.421 0.00 0.00 0.00 4.85
170 171 2.565645 CCCTACCCGAGATCTGCCG 61.566 68.421 0.00 0.00 0.00 5.69
171 172 2.565645 CCTACCCGAGATCTGCCGG 61.566 68.421 14.42 14.42 44.94 6.13
172 173 1.828660 CTACCCGAGATCTGCCGGT 60.829 63.158 18.55 13.92 43.93 5.28
173 174 1.380785 TACCCGAGATCTGCCGGTT 60.381 57.895 18.55 9.56 43.93 4.44
174 175 0.974010 TACCCGAGATCTGCCGGTTT 60.974 55.000 18.55 9.73 43.93 3.27
175 176 1.078426 CCCGAGATCTGCCGGTTTT 60.078 57.895 18.55 0.00 43.93 2.43
176 177 1.369091 CCCGAGATCTGCCGGTTTTG 61.369 60.000 18.55 3.10 43.93 2.44
177 178 0.391130 CCGAGATCTGCCGGTTTTGA 60.391 55.000 13.39 0.00 40.78 2.69
178 179 0.721718 CGAGATCTGCCGGTTTTGAC 59.278 55.000 0.00 0.00 0.00 3.18
179 180 1.808411 GAGATCTGCCGGTTTTGACA 58.192 50.000 0.00 0.00 0.00 3.58
180 181 1.464997 GAGATCTGCCGGTTTTGACAC 59.535 52.381 0.00 0.00 0.00 3.67
181 182 0.521735 GATCTGCCGGTTTTGACACC 59.478 55.000 1.90 0.00 0.00 4.16
189 190 2.415697 GGTTTTGACACCGACAATGG 57.584 50.000 0.00 0.00 0.00 3.16
190 191 1.679153 GGTTTTGACACCGACAATGGT 59.321 47.619 0.00 0.00 45.21 3.55
203 204 1.820519 ACAATGGTGTCATGACATGGC 59.179 47.619 30.10 17.72 43.97 4.40
204 205 1.819903 CAATGGTGTCATGACATGGCA 59.180 47.619 30.10 18.64 43.65 4.92
254 255 8.466617 TCCAATTTAAGGCAAACTTTAGTACA 57.533 30.769 0.00 0.00 40.64 2.90
255 256 8.915036 TCCAATTTAAGGCAAACTTTAGTACAA 58.085 29.630 0.00 0.00 40.64 2.41
256 257 9.191995 CCAATTTAAGGCAAACTTTAGTACAAG 57.808 33.333 0.00 0.00 40.64 3.16
257 258 8.699749 CAATTTAAGGCAAACTTTAGTACAAGC 58.300 33.333 0.00 0.00 40.64 4.01
258 259 4.848562 AAGGCAAACTTTAGTACAAGCC 57.151 40.909 0.00 0.00 35.35 4.35
259 260 4.100279 AGGCAAACTTTAGTACAAGCCT 57.900 40.909 0.00 0.00 45.71 4.58
260 261 4.421033 GGCAAACTTTAGTACAAGCCTC 57.579 45.455 0.00 0.00 37.89 4.70
261 262 4.072839 GGCAAACTTTAGTACAAGCCTCT 58.927 43.478 0.00 0.00 37.89 3.69
262 263 4.519350 GGCAAACTTTAGTACAAGCCTCTT 59.481 41.667 0.00 0.00 37.89 2.85
263 264 5.704053 GGCAAACTTTAGTACAAGCCTCTTA 59.296 40.000 0.00 0.00 37.89 2.10
264 265 6.348295 GGCAAACTTTAGTACAAGCCTCTTAC 60.348 42.308 0.00 0.00 37.89 2.34
265 266 6.204108 GCAAACTTTAGTACAAGCCTCTTACA 59.796 38.462 0.00 0.00 0.00 2.41
266 267 7.255001 GCAAACTTTAGTACAAGCCTCTTACAA 60.255 37.037 0.00 0.00 0.00 2.41
267 268 8.617809 CAAACTTTAGTACAAGCCTCTTACAAA 58.382 33.333 0.00 0.00 0.00 2.83
268 269 8.919777 AACTTTAGTACAAGCCTCTTACAAAT 57.080 30.769 0.00 0.00 0.00 2.32
269 270 8.549338 ACTTTAGTACAAGCCTCTTACAAATC 57.451 34.615 0.00 0.00 0.00 2.17
270 271 7.331193 ACTTTAGTACAAGCCTCTTACAAATCG 59.669 37.037 0.00 0.00 0.00 3.34
271 272 5.148651 AGTACAAGCCTCTTACAAATCGT 57.851 39.130 0.00 0.00 0.00 3.73
272 273 6.276832 AGTACAAGCCTCTTACAAATCGTA 57.723 37.500 0.00 0.00 0.00 3.43
273 274 6.331061 AGTACAAGCCTCTTACAAATCGTAG 58.669 40.000 0.00 0.00 0.00 3.51
274 275 3.933332 ACAAGCCTCTTACAAATCGTAGC 59.067 43.478 0.00 0.00 0.00 3.58
275 276 4.184629 CAAGCCTCTTACAAATCGTAGCT 58.815 43.478 0.00 0.00 31.20 3.32
276 277 4.473477 AGCCTCTTACAAATCGTAGCTT 57.527 40.909 0.00 0.00 26.60 3.74
277 278 4.434520 AGCCTCTTACAAATCGTAGCTTC 58.565 43.478 0.00 0.00 26.60 3.86
278 279 4.081642 AGCCTCTTACAAATCGTAGCTTCA 60.082 41.667 0.00 0.00 26.60 3.02
279 280 4.033014 GCCTCTTACAAATCGTAGCTTCAC 59.967 45.833 0.00 0.00 0.00 3.18
280 281 5.168569 CCTCTTACAAATCGTAGCTTCACA 58.831 41.667 0.00 0.00 0.00 3.58
281 282 5.062308 CCTCTTACAAATCGTAGCTTCACAC 59.938 44.000 0.00 0.00 0.00 3.82
282 283 5.534407 TCTTACAAATCGTAGCTTCACACA 58.466 37.500 0.00 0.00 0.00 3.72
283 284 5.986741 TCTTACAAATCGTAGCTTCACACAA 59.013 36.000 0.00 0.00 0.00 3.33
284 285 4.732285 ACAAATCGTAGCTTCACACAAG 57.268 40.909 0.00 0.00 0.00 3.16
285 286 4.377021 ACAAATCGTAGCTTCACACAAGA 58.623 39.130 0.00 0.00 0.00 3.02
286 287 4.814234 ACAAATCGTAGCTTCACACAAGAA 59.186 37.500 0.00 0.00 0.00 2.52
287 288 5.050091 ACAAATCGTAGCTTCACACAAGAAG 60.050 40.000 0.00 0.00 46.06 2.85
288 289 3.728076 TCGTAGCTTCACACAAGAAGT 57.272 42.857 0.00 0.00 45.28 3.01
289 290 4.054780 TCGTAGCTTCACACAAGAAGTT 57.945 40.909 0.00 2.48 45.28 2.66
290 291 4.439057 TCGTAGCTTCACACAAGAAGTTT 58.561 39.130 0.00 0.00 45.28 2.66
291 292 4.506654 TCGTAGCTTCACACAAGAAGTTTC 59.493 41.667 0.00 0.00 45.28 2.78
292 293 3.951979 AGCTTCACACAAGAAGTTTCG 57.048 42.857 5.70 0.00 45.28 3.46
293 294 3.270877 AGCTTCACACAAGAAGTTTCGT 58.729 40.909 5.70 0.00 45.28 3.85
294 295 3.063997 AGCTTCACACAAGAAGTTTCGTG 59.936 43.478 6.30 6.30 45.28 4.35
295 296 3.063452 GCTTCACACAAGAAGTTTCGTGA 59.937 43.478 13.42 5.74 45.28 4.35
296 297 4.260784 GCTTCACACAAGAAGTTTCGTGAT 60.261 41.667 13.42 0.63 45.28 3.06
297 298 5.730568 GCTTCACACAAGAAGTTTCGTGATT 60.731 40.000 13.42 0.00 45.28 2.57
298 299 5.155509 TCACACAAGAAGTTTCGTGATTG 57.844 39.130 13.42 9.67 38.67 2.67
299 300 3.725740 CACACAAGAAGTTTCGTGATTGC 59.274 43.478 13.42 0.00 38.67 3.56
300 301 2.966708 CACAAGAAGTTTCGTGATTGCG 59.033 45.455 13.42 0.00 38.67 4.85
301 302 2.869801 ACAAGAAGTTTCGTGATTGCGA 59.130 40.909 13.42 0.00 38.67 5.10
302 303 3.498397 ACAAGAAGTTTCGTGATTGCGAT 59.502 39.130 13.42 0.00 40.76 4.58
303 304 4.688879 ACAAGAAGTTTCGTGATTGCGATA 59.311 37.500 13.42 0.00 40.76 2.92
304 305 5.163953 ACAAGAAGTTTCGTGATTGCGATAG 60.164 40.000 13.42 0.00 40.76 2.08
305 306 3.865745 AGAAGTTTCGTGATTGCGATAGG 59.134 43.478 0.00 0.00 40.76 2.57
306 307 2.550978 AGTTTCGTGATTGCGATAGGG 58.449 47.619 0.00 0.00 40.76 3.53
307 308 2.167693 AGTTTCGTGATTGCGATAGGGA 59.832 45.455 0.00 0.00 40.76 4.20
308 309 2.933906 GTTTCGTGATTGCGATAGGGAA 59.066 45.455 0.00 0.00 40.76 3.97
309 310 2.971660 TCGTGATTGCGATAGGGAAA 57.028 45.000 0.00 0.00 35.83 3.13
310 311 2.821546 TCGTGATTGCGATAGGGAAAG 58.178 47.619 0.00 0.00 35.83 2.62
311 312 2.167693 TCGTGATTGCGATAGGGAAAGT 59.832 45.455 0.00 0.00 35.83 2.66
312 313 2.285220 CGTGATTGCGATAGGGAAAGTG 59.715 50.000 0.00 0.00 0.00 3.16
313 314 3.270877 GTGATTGCGATAGGGAAAGTGT 58.729 45.455 0.00 0.00 0.00 3.55
314 315 3.309954 GTGATTGCGATAGGGAAAGTGTC 59.690 47.826 0.00 0.00 0.00 3.67
315 316 3.055458 TGATTGCGATAGGGAAAGTGTCA 60.055 43.478 0.00 0.00 0.00 3.58
316 317 2.380084 TGCGATAGGGAAAGTGTCAC 57.620 50.000 0.00 0.00 0.00 3.67
317 318 1.899814 TGCGATAGGGAAAGTGTCACT 59.100 47.619 0.00 0.00 44.53 3.41
318 319 2.301870 TGCGATAGGGAAAGTGTCACTT 59.698 45.455 12.62 12.62 36.10 3.16
319 320 2.673368 GCGATAGGGAAAGTGTCACTTG 59.327 50.000 18.84 5.17 36.10 3.16
320 321 3.262420 CGATAGGGAAAGTGTCACTTGG 58.738 50.000 18.84 0.00 36.10 3.61
321 322 2.561478 TAGGGAAAGTGTCACTTGGC 57.439 50.000 18.84 13.39 36.10 4.52
322 323 0.846693 AGGGAAAGTGTCACTTGGCT 59.153 50.000 18.84 3.49 36.10 4.75
323 324 1.215423 AGGGAAAGTGTCACTTGGCTT 59.785 47.619 18.84 3.11 36.10 4.35
324 325 2.031870 GGGAAAGTGTCACTTGGCTTT 58.968 47.619 18.84 2.72 38.66 3.51
325 326 2.430694 GGGAAAGTGTCACTTGGCTTTT 59.569 45.455 18.84 1.96 38.66 2.27
326 327 3.118775 GGGAAAGTGTCACTTGGCTTTTT 60.119 43.478 18.84 1.21 38.66 1.94
327 328 4.098807 GGGAAAGTGTCACTTGGCTTTTTA 59.901 41.667 18.84 0.00 38.66 1.52
328 329 5.041287 GGAAAGTGTCACTTGGCTTTTTAC 58.959 41.667 18.84 0.00 38.66 2.01
329 330 4.649088 AAGTGTCACTTGGCTTTTTACC 57.351 40.909 17.49 0.00 37.00 2.85
330 331 2.956333 AGTGTCACTTGGCTTTTTACCC 59.044 45.455 0.00 0.00 0.00 3.69
331 332 1.950909 TGTCACTTGGCTTTTTACCCG 59.049 47.619 0.00 0.00 0.00 5.28
332 333 0.955905 TCACTTGGCTTTTTACCCGC 59.044 50.000 0.00 0.00 0.00 6.13
333 334 0.671251 CACTTGGCTTTTTACCCGCA 59.329 50.000 0.00 0.00 0.00 5.69
334 335 0.671796 ACTTGGCTTTTTACCCGCAC 59.328 50.000 0.00 0.00 0.00 5.34
335 336 0.386731 CTTGGCTTTTTACCCGCACG 60.387 55.000 0.00 0.00 0.00 5.34
336 337 1.102222 TTGGCTTTTTACCCGCACGT 61.102 50.000 0.00 0.00 0.00 4.49
337 338 1.208358 GGCTTTTTACCCGCACGTC 59.792 57.895 0.00 0.00 0.00 4.34
338 339 1.154543 GCTTTTTACCCGCACGTCG 60.155 57.895 0.00 0.00 38.08 5.12
339 340 1.154543 CTTTTTACCCGCACGTCGC 60.155 57.895 0.00 0.00 36.73 5.19
340 341 1.562575 CTTTTTACCCGCACGTCGCT 61.563 55.000 8.07 0.00 39.08 4.93
341 342 0.319383 TTTTTACCCGCACGTCGCTA 60.319 50.000 8.07 0.00 39.08 4.26
342 343 0.108709 TTTTACCCGCACGTCGCTAT 60.109 50.000 8.07 0.00 39.08 2.97
343 344 0.802994 TTTACCCGCACGTCGCTATG 60.803 55.000 8.07 0.00 39.08 2.23
344 345 1.655885 TTACCCGCACGTCGCTATGA 61.656 55.000 8.07 0.00 39.08 2.15
345 346 1.655885 TACCCGCACGTCGCTATGAA 61.656 55.000 8.07 0.00 39.08 2.57
346 347 2.230940 CCCGCACGTCGCTATGAAG 61.231 63.158 8.07 0.00 39.08 3.02
347 348 2.615618 CGCACGTCGCTATGAAGC 59.384 61.111 8.07 0.00 45.86 3.86
366 367 1.926561 CATCGAATGCTCGTCTTGGA 58.073 50.000 0.00 0.00 45.62 3.53
367 368 2.477825 CATCGAATGCTCGTCTTGGAT 58.522 47.619 0.00 0.00 45.62 3.41
368 369 2.672961 TCGAATGCTCGTCTTGGATT 57.327 45.000 0.00 0.00 45.62 3.01
369 370 2.972625 TCGAATGCTCGTCTTGGATTT 58.027 42.857 0.00 0.00 45.62 2.17
370 371 3.334691 TCGAATGCTCGTCTTGGATTTT 58.665 40.909 0.00 0.00 45.62 1.82
371 372 3.751175 TCGAATGCTCGTCTTGGATTTTT 59.249 39.130 0.00 0.00 45.62 1.94
406 407 9.758651 TGCAACATAGATAAATATAAGTGTCGT 57.241 29.630 0.00 0.00 0.00 4.34
434 435 9.486123 TTGAAATATGGAATTATTCAGGGTTCA 57.514 29.630 7.29 6.72 33.29 3.18
435 436 9.659135 TGAAATATGGAATTATTCAGGGTTCAT 57.341 29.630 7.29 2.94 29.84 2.57
439 440 6.543430 TGGAATTATTCAGGGTTCATTTGG 57.457 37.500 7.29 0.00 0.00 3.28
440 441 5.104982 TGGAATTATTCAGGGTTCATTTGGC 60.105 40.000 7.29 0.00 0.00 4.52
441 442 5.129320 GGAATTATTCAGGGTTCATTTGGCT 59.871 40.000 7.29 0.00 0.00 4.75
442 443 6.352137 GGAATTATTCAGGGTTCATTTGGCTT 60.352 38.462 7.29 0.00 0.00 4.35
443 444 6.625532 ATTATTCAGGGTTCATTTGGCTTT 57.374 33.333 0.00 0.00 0.00 3.51
444 445 4.980339 ATTCAGGGTTCATTTGGCTTTT 57.020 36.364 0.00 0.00 0.00 2.27
445 446 4.769345 TTCAGGGTTCATTTGGCTTTTT 57.231 36.364 0.00 0.00 0.00 1.94
446 447 5.878406 TTCAGGGTTCATTTGGCTTTTTA 57.122 34.783 0.00 0.00 0.00 1.52
447 448 6.432403 TTCAGGGTTCATTTGGCTTTTTAT 57.568 33.333 0.00 0.00 0.00 1.40
448 449 7.546250 TTCAGGGTTCATTTGGCTTTTTATA 57.454 32.000 0.00 0.00 0.00 0.98
449 450 6.930731 TCAGGGTTCATTTGGCTTTTTATAC 58.069 36.000 0.00 0.00 0.00 1.47
450 451 6.495181 TCAGGGTTCATTTGGCTTTTTATACA 59.505 34.615 0.00 0.00 0.00 2.29
451 452 7.180051 TCAGGGTTCATTTGGCTTTTTATACAT 59.820 33.333 0.00 0.00 0.00 2.29
452 453 7.823799 CAGGGTTCATTTGGCTTTTTATACATT 59.176 33.333 0.00 0.00 0.00 2.71
453 454 9.041354 AGGGTTCATTTGGCTTTTTATACATTA 57.959 29.630 0.00 0.00 0.00 1.90
454 455 9.660180 GGGTTCATTTGGCTTTTTATACATTAA 57.340 29.630 0.00 0.00 0.00 1.40
516 517 8.969121 TTGAATTATAAGCACATGTTTCAGTG 57.031 30.769 0.00 0.00 38.74 3.66
517 518 7.537715 TGAATTATAAGCACATGTTTCAGTGG 58.462 34.615 0.00 0.00 36.29 4.00
518 519 7.392953 TGAATTATAAGCACATGTTTCAGTGGA 59.607 33.333 0.00 0.00 36.29 4.02
519 520 6.494893 TTATAAGCACATGTTTCAGTGGAC 57.505 37.500 0.00 0.00 36.29 4.02
520 521 1.609208 AGCACATGTTTCAGTGGACC 58.391 50.000 0.00 0.00 36.29 4.46
521 522 1.133823 AGCACATGTTTCAGTGGACCA 60.134 47.619 0.00 0.00 36.29 4.02
522 523 1.680735 GCACATGTTTCAGTGGACCAA 59.319 47.619 0.00 0.00 36.29 3.67
523 524 2.100584 GCACATGTTTCAGTGGACCAAA 59.899 45.455 0.00 0.00 36.29 3.28
524 525 3.430098 GCACATGTTTCAGTGGACCAAAA 60.430 43.478 0.00 0.00 36.29 2.44
525 526 4.740334 GCACATGTTTCAGTGGACCAAAAT 60.740 41.667 0.00 0.00 36.29 1.82
526 527 4.746115 CACATGTTTCAGTGGACCAAAATG 59.254 41.667 0.00 0.00 32.24 2.32
527 528 4.202243 ACATGTTTCAGTGGACCAAAATGG 60.202 41.667 0.00 0.00 45.02 3.16
528 529 3.636679 TGTTTCAGTGGACCAAAATGGA 58.363 40.909 2.85 0.00 40.96 3.41
529 530 4.026744 TGTTTCAGTGGACCAAAATGGAA 58.973 39.130 2.85 0.00 40.96 3.53
530 531 4.653341 TGTTTCAGTGGACCAAAATGGAAT 59.347 37.500 2.85 0.00 40.96 3.01
531 532 5.835819 TGTTTCAGTGGACCAAAATGGAATA 59.164 36.000 2.85 0.00 40.96 1.75
532 533 6.325028 TGTTTCAGTGGACCAAAATGGAATAA 59.675 34.615 2.85 0.00 40.96 1.40
533 534 7.016072 TGTTTCAGTGGACCAAAATGGAATAAT 59.984 33.333 2.85 0.00 40.96 1.28
534 535 8.527810 GTTTCAGTGGACCAAAATGGAATAATA 58.472 33.333 2.85 0.00 40.96 0.98
535 536 7.639113 TCAGTGGACCAAAATGGAATAATAC 57.361 36.000 2.85 0.00 40.96 1.89
536 537 7.178573 TCAGTGGACCAAAATGGAATAATACA 58.821 34.615 2.85 0.00 40.96 2.29
537 538 7.838696 TCAGTGGACCAAAATGGAATAATACAT 59.161 33.333 2.85 0.00 40.96 2.29
538 539 7.922278 CAGTGGACCAAAATGGAATAATACATG 59.078 37.037 2.85 0.00 40.96 3.21
539 540 6.701400 GTGGACCAAAATGGAATAATACATGC 59.299 38.462 2.85 0.00 40.96 4.06
540 541 5.920273 GGACCAAAATGGAATAATACATGCG 59.080 40.000 2.85 0.00 40.96 4.73
541 542 5.841810 ACCAAAATGGAATAATACATGCGG 58.158 37.500 2.85 0.00 40.96 5.69
542 543 4.685628 CCAAAATGGAATAATACATGCGGC 59.314 41.667 0.00 0.00 40.96 6.53
543 544 4.519540 AAATGGAATAATACATGCGGCC 57.480 40.909 0.00 0.00 0.00 6.13
544 545 2.647683 TGGAATAATACATGCGGCCA 57.352 45.000 2.24 0.00 0.00 5.36
545 546 3.153369 TGGAATAATACATGCGGCCAT 57.847 42.857 2.24 0.00 0.00 4.40
552 553 3.902318 CATGCGGCCATGTGTGTA 58.098 55.556 2.24 0.00 43.07 2.90
553 554 1.429021 CATGCGGCCATGTGTGTAC 59.571 57.895 2.24 0.00 43.07 2.90
554 555 1.748879 ATGCGGCCATGTGTGTACC 60.749 57.895 2.24 0.00 0.00 3.34
555 556 2.359354 GCGGCCATGTGTGTACCA 60.359 61.111 2.24 0.00 0.00 3.25
556 557 1.748879 GCGGCCATGTGTGTACCAT 60.749 57.895 2.24 0.00 0.00 3.55
557 558 1.312371 GCGGCCATGTGTGTACCATT 61.312 55.000 2.24 0.00 0.00 3.16
558 559 1.173043 CGGCCATGTGTGTACCATTT 58.827 50.000 2.24 0.00 0.00 2.32
559 560 1.543802 CGGCCATGTGTGTACCATTTT 59.456 47.619 2.24 0.00 0.00 1.82
560 561 2.029470 CGGCCATGTGTGTACCATTTTT 60.029 45.455 2.24 0.00 0.00 1.94
561 562 3.324993 GGCCATGTGTGTACCATTTTTG 58.675 45.455 0.00 0.00 0.00 2.44
562 563 2.736192 GCCATGTGTGTACCATTTTTGC 59.264 45.455 0.00 0.00 0.00 3.68
563 564 3.554752 GCCATGTGTGTACCATTTTTGCT 60.555 43.478 0.00 0.00 0.00 3.91
564 565 4.321601 GCCATGTGTGTACCATTTTTGCTA 60.322 41.667 0.00 0.00 0.00 3.49
565 566 5.777802 CCATGTGTGTACCATTTTTGCTAA 58.222 37.500 0.00 0.00 0.00 3.09
566 567 6.397272 CCATGTGTGTACCATTTTTGCTAAT 58.603 36.000 0.00 0.00 0.00 1.73
567 568 7.542890 CCATGTGTGTACCATTTTTGCTAATA 58.457 34.615 0.00 0.00 0.00 0.98
568 569 7.701924 CCATGTGTGTACCATTTTTGCTAATAG 59.298 37.037 0.00 0.00 0.00 1.73
569 570 7.151999 TGTGTGTACCATTTTTGCTAATAGG 57.848 36.000 0.00 0.00 0.00 2.57
570 571 6.151985 TGTGTGTACCATTTTTGCTAATAGGG 59.848 38.462 1.06 1.06 0.00 3.53
571 572 5.126384 TGTGTACCATTTTTGCTAATAGGGC 59.874 40.000 2.38 0.00 0.00 5.19
572 573 4.647399 TGTACCATTTTTGCTAATAGGGCC 59.353 41.667 0.00 0.00 0.00 5.80
573 574 3.038280 ACCATTTTTGCTAATAGGGCCC 58.962 45.455 16.46 16.46 0.00 5.80
574 575 3.308401 CCATTTTTGCTAATAGGGCCCT 58.692 45.455 31.35 31.35 0.00 5.19
575 576 3.711190 CCATTTTTGCTAATAGGGCCCTT 59.289 43.478 34.04 16.77 0.00 3.95
576 577 4.443315 CCATTTTTGCTAATAGGGCCCTTG 60.443 45.833 34.04 17.33 0.00 3.61
577 578 2.452600 TTTGCTAATAGGGCCCTTGG 57.547 50.000 34.04 16.93 0.00 3.61
578 579 0.555769 TTGCTAATAGGGCCCTTGGG 59.444 55.000 34.04 18.62 0.00 4.12
579 580 0.626277 TGCTAATAGGGCCCTTGGGT 60.626 55.000 34.04 15.44 0.00 4.51
580 581 0.110678 GCTAATAGGGCCCTTGGGTC 59.889 60.000 34.04 13.51 0.00 4.46
581 582 0.771755 CTAATAGGGCCCTTGGGTCC 59.228 60.000 34.04 21.20 0.00 4.46
582 583 1.057851 TAATAGGGCCCTTGGGTCCG 61.058 60.000 34.04 0.00 0.00 4.79
588 589 3.361977 CCCTTGGGTCCGCGTTTG 61.362 66.667 4.92 0.00 0.00 2.93
589 590 4.038080 CCTTGGGTCCGCGTTTGC 62.038 66.667 4.92 0.00 37.91 3.68
590 591 2.978010 CTTGGGTCCGCGTTTGCT 60.978 61.111 4.92 0.00 39.65 3.91
591 592 2.966309 CTTGGGTCCGCGTTTGCTC 61.966 63.158 4.92 0.00 39.65 4.26
594 595 3.774702 GGTCCGCGTTTGCTCGAC 61.775 66.667 4.92 2.82 39.65 4.20
595 596 3.774702 GTCCGCGTTTGCTCGACC 61.775 66.667 4.92 0.00 39.65 4.79
600 601 3.479269 CGTTTGCTCGACCGCCTC 61.479 66.667 0.00 0.00 0.00 4.70
601 602 3.119096 GTTTGCTCGACCGCCTCC 61.119 66.667 0.00 0.00 0.00 4.30
602 603 4.735132 TTTGCTCGACCGCCTCCG 62.735 66.667 0.00 0.00 0.00 4.63
607 608 4.758251 TCGACCGCCTCCGTCGTA 62.758 66.667 9.84 0.00 38.33 3.43
608 609 3.580193 CGACCGCCTCCGTCGTAT 61.580 66.667 2.34 0.00 35.14 3.06
609 610 2.025727 GACCGCCTCCGTCGTATG 59.974 66.667 0.00 0.00 0.00 2.39
610 611 4.203076 ACCGCCTCCGTCGTATGC 62.203 66.667 0.00 0.00 0.00 3.14
611 612 3.900892 CCGCCTCCGTCGTATGCT 61.901 66.667 0.00 0.00 0.00 3.79
612 613 2.353607 CGCCTCCGTCGTATGCTC 60.354 66.667 0.00 0.00 0.00 4.26
613 614 2.353607 GCCTCCGTCGTATGCTCG 60.354 66.667 0.00 0.00 0.00 5.03
614 615 2.331805 CCTCCGTCGTATGCTCGG 59.668 66.667 10.67 10.67 44.76 4.63
618 619 2.506544 CCGTCGTATGCTCGGAATG 58.493 57.895 11.24 0.00 46.05 2.67
619 620 0.030235 CCGTCGTATGCTCGGAATGA 59.970 55.000 11.24 0.00 46.05 2.57
620 621 1.335964 CCGTCGTATGCTCGGAATGAT 60.336 52.381 11.24 0.00 46.05 2.45
621 622 2.394708 CGTCGTATGCTCGGAATGATT 58.605 47.619 0.00 0.00 0.00 2.57
622 623 2.153817 CGTCGTATGCTCGGAATGATTG 59.846 50.000 0.00 0.00 0.00 2.67
623 624 3.123804 GTCGTATGCTCGGAATGATTGT 58.876 45.455 0.00 0.00 0.00 2.71
624 625 4.295870 GTCGTATGCTCGGAATGATTGTA 58.704 43.478 0.00 0.00 0.00 2.41
625 626 4.923871 GTCGTATGCTCGGAATGATTGTAT 59.076 41.667 0.00 0.00 0.00 2.29
626 627 4.923281 TCGTATGCTCGGAATGATTGTATG 59.077 41.667 0.00 0.00 0.00 2.39
627 628 4.434725 CGTATGCTCGGAATGATTGTATGC 60.435 45.833 0.00 0.00 0.00 3.14
628 629 1.866601 TGCTCGGAATGATTGTATGCG 59.133 47.619 0.00 0.00 0.00 4.73
629 630 1.867233 GCTCGGAATGATTGTATGCGT 59.133 47.619 0.00 0.00 0.00 5.24
630 631 2.348872 GCTCGGAATGATTGTATGCGTG 60.349 50.000 0.00 0.00 0.00 5.34
631 632 2.209273 TCGGAATGATTGTATGCGTGG 58.791 47.619 0.00 0.00 0.00 4.94
632 633 2.159028 TCGGAATGATTGTATGCGTGGA 60.159 45.455 0.00 0.00 0.00 4.02
633 634 2.611751 CGGAATGATTGTATGCGTGGAA 59.388 45.455 0.00 0.00 0.00 3.53
634 635 3.250762 CGGAATGATTGTATGCGTGGAAT 59.749 43.478 0.00 0.00 0.00 3.01
635 636 4.261155 CGGAATGATTGTATGCGTGGAATT 60.261 41.667 0.00 0.00 0.00 2.17
636 637 5.049749 CGGAATGATTGTATGCGTGGAATTA 60.050 40.000 0.00 0.00 0.00 1.40
637 638 6.348458 CGGAATGATTGTATGCGTGGAATTAT 60.348 38.462 0.00 0.00 0.00 1.28
638 639 6.803320 GGAATGATTGTATGCGTGGAATTATG 59.197 38.462 0.00 0.00 0.00 1.90
639 640 7.308529 GGAATGATTGTATGCGTGGAATTATGA 60.309 37.037 0.00 0.00 0.00 2.15
640 641 6.544038 TGATTGTATGCGTGGAATTATGAG 57.456 37.500 0.00 0.00 0.00 2.90
641 642 6.054941 TGATTGTATGCGTGGAATTATGAGT 58.945 36.000 0.00 0.00 0.00 3.41
642 643 6.542005 TGATTGTATGCGTGGAATTATGAGTT 59.458 34.615 0.00 0.00 0.00 3.01
643 644 5.733226 TGTATGCGTGGAATTATGAGTTG 57.267 39.130 0.00 0.00 0.00 3.16
644 645 3.698029 ATGCGTGGAATTATGAGTTGC 57.302 42.857 0.00 0.00 0.00 4.17
645 646 2.710377 TGCGTGGAATTATGAGTTGCT 58.290 42.857 0.00 0.00 0.00 3.91
646 647 3.867857 TGCGTGGAATTATGAGTTGCTA 58.132 40.909 0.00 0.00 0.00 3.49
647 648 3.621268 TGCGTGGAATTATGAGTTGCTAC 59.379 43.478 0.00 0.00 0.00 3.58
648 649 3.621268 GCGTGGAATTATGAGTTGCTACA 59.379 43.478 0.13 0.00 0.00 2.74
649 650 4.094294 GCGTGGAATTATGAGTTGCTACAA 59.906 41.667 0.13 0.00 0.00 2.41
650 651 5.220854 GCGTGGAATTATGAGTTGCTACAAT 60.221 40.000 0.13 0.00 0.00 2.71
651 652 6.018262 GCGTGGAATTATGAGTTGCTACAATA 60.018 38.462 0.13 0.00 0.00 1.90
652 653 7.466725 GCGTGGAATTATGAGTTGCTACAATAA 60.467 37.037 0.13 5.19 0.00 1.40
653 654 7.850982 CGTGGAATTATGAGTTGCTACAATAAC 59.149 37.037 0.13 0.00 0.00 1.89
654 655 8.129211 GTGGAATTATGAGTTGCTACAATAACC 58.871 37.037 0.13 4.42 0.00 2.85
655 656 7.831690 TGGAATTATGAGTTGCTACAATAACCA 59.168 33.333 0.13 6.55 0.00 3.67
656 657 8.682710 GGAATTATGAGTTGCTACAATAACCAA 58.317 33.333 0.13 0.00 0.00 3.67
659 660 8.800370 TTATGAGTTGCTACAATAACCAATGA 57.200 30.769 0.13 0.00 0.00 2.57
660 661 6.741992 TGAGTTGCTACAATAACCAATGAG 57.258 37.500 0.13 0.00 0.00 2.90
661 662 6.472016 TGAGTTGCTACAATAACCAATGAGA 58.528 36.000 0.13 0.00 0.00 3.27
662 663 6.939730 TGAGTTGCTACAATAACCAATGAGAA 59.060 34.615 0.13 0.00 0.00 2.87
663 664 7.446931 TGAGTTGCTACAATAACCAATGAGAAA 59.553 33.333 0.13 0.00 0.00 2.52
664 665 8.177119 AGTTGCTACAATAACCAATGAGAAAA 57.823 30.769 0.13 0.00 0.00 2.29
665 666 8.637986 AGTTGCTACAATAACCAATGAGAAAAA 58.362 29.630 0.13 0.00 0.00 1.94
666 667 8.699749 GTTGCTACAATAACCAATGAGAAAAAC 58.300 33.333 0.00 0.00 0.00 2.43
667 668 7.946207 TGCTACAATAACCAATGAGAAAAACA 58.054 30.769 0.00 0.00 0.00 2.83
668 669 8.417106 TGCTACAATAACCAATGAGAAAAACAA 58.583 29.630 0.00 0.00 0.00 2.83
669 670 9.255304 GCTACAATAACCAATGAGAAAAACAAA 57.745 29.630 0.00 0.00 0.00 2.83
731 732 5.244626 ACGCGTTACCCCTAGTATGAAATAT 59.755 40.000 5.58 0.00 0.00 1.28
821 826 2.203070 CGAAAGGGAGCATCGGGG 60.203 66.667 0.00 0.00 34.37 5.73
822 827 2.731571 CGAAAGGGAGCATCGGGGA 61.732 63.158 0.00 0.00 34.37 4.81
823 828 1.607612 GAAAGGGAGCATCGGGGAA 59.392 57.895 0.00 0.00 34.37 3.97
841 846 3.299503 GGAATACCATCACCTTGCCATT 58.700 45.455 0.00 0.00 35.97 3.16
880 889 2.113139 CCGCAACAGGGTCCACTT 59.887 61.111 0.00 0.00 0.00 3.16
887 896 0.106149 ACAGGGTCCACTTGTCGAAC 59.894 55.000 0.00 0.00 0.00 3.95
919 936 2.093973 CCATCTCCTACGCAGAAACACT 60.094 50.000 0.00 0.00 0.00 3.55
945 962 6.656902 ACACATATGAACTCATCACCTTCAT 58.343 36.000 10.38 0.00 41.93 2.57
946 963 7.795047 ACACATATGAACTCATCACCTTCATA 58.205 34.615 10.38 0.00 41.93 2.15
947 964 7.712639 ACACATATGAACTCATCACCTTCATAC 59.287 37.037 10.38 0.00 41.93 2.39
948 965 6.925718 ACATATGAACTCATCACCTTCATACG 59.074 38.462 10.38 0.00 41.93 3.06
1736 1777 2.731348 GATCGCGGCGTGATCCTC 60.731 66.667 39.44 24.85 41.90 3.71
1739 1780 4.630785 CGCGGCGTGATCCTCGAT 62.631 66.667 16.70 0.00 36.51 3.59
1811 1852 0.319900 ACGCCATCATCGATACCTGC 60.320 55.000 0.00 0.00 0.00 4.85
1832 1873 3.157252 AGCGGCACCATCCTCGAT 61.157 61.111 1.45 0.00 0.00 3.59
1882 1927 4.976731 GTGCGTACACCATCTAATCTACAG 59.023 45.833 0.00 0.00 41.21 2.74
1886 1932 6.372185 CGTACACCATCTAATCTACAGTAGC 58.628 44.000 2.26 0.00 0.00 3.58
1898 1944 9.469807 CTAATCTACAGTAGCTAATTTCCAGTG 57.530 37.037 2.26 0.00 0.00 3.66
1902 1948 4.256920 CAGTAGCTAATTTCCAGTGCACT 58.743 43.478 15.25 15.25 0.00 4.40
1981 2036 0.602905 GGGAGAACCACAACCGTCAG 60.603 60.000 0.00 0.00 39.85 3.51
1984 2039 1.525077 GAACCACAACCGTCAGCCA 60.525 57.895 0.00 0.00 0.00 4.75
1987 2042 1.003355 CCACAACCGTCAGCCAGAT 60.003 57.895 0.00 0.00 0.00 2.90
1990 2045 1.672030 CAACCGTCAGCCAGATGCA 60.672 57.895 0.00 0.00 44.83 3.96
2363 2423 7.888250 AGAATTAATTCATCCTCACCTTTCC 57.112 36.000 26.02 0.00 39.23 3.13
2366 2426 3.550437 ATTCATCCTCACCTTTCCTCG 57.450 47.619 0.00 0.00 0.00 4.63
2440 2500 5.310451 ACAGGAAGCCGTTTATCTTGTAAA 58.690 37.500 0.00 0.00 32.44 2.01
2448 2508 8.514330 AGCCGTTTATCTTGTAAATATGGAAA 57.486 30.769 0.00 0.00 0.00 3.13
2449 2509 8.962679 AGCCGTTTATCTTGTAAATATGGAAAA 58.037 29.630 0.00 0.00 0.00 2.29
2530 4022 5.365021 AGTAGTTAAGCTCATCCTGCATT 57.635 39.130 0.00 0.00 0.00 3.56
2541 4033 3.435327 TCATCCTGCATTCGTTGTGTAAC 59.565 43.478 0.00 0.00 37.35 2.50
2553 4045 8.708742 CATTCGTTGTGTAACTGAAGAGAAATA 58.291 33.333 0.00 0.00 38.04 1.40
2569 4061 7.205515 AGAGAAATATTGAGTGGTTCCAGAT 57.794 36.000 0.00 0.00 0.00 2.90
2593 4085 6.527423 TGATTCTAAACCGTCCACTTACTTT 58.473 36.000 0.00 0.00 0.00 2.66
2596 4088 5.916318 TCTAAACCGTCCACTTACTTTGAA 58.084 37.500 0.00 0.00 0.00 2.69
2597 4089 4.888038 AAACCGTCCACTTACTTTGAAC 57.112 40.909 0.00 0.00 0.00 3.18
2598 4090 3.832615 ACCGTCCACTTACTTTGAACT 57.167 42.857 0.00 0.00 0.00 3.01
2600 4092 4.879598 ACCGTCCACTTACTTTGAACTAG 58.120 43.478 0.00 0.00 0.00 2.57
2601 4093 3.678548 CCGTCCACTTACTTTGAACTAGC 59.321 47.826 0.00 0.00 0.00 3.42
2604 4096 3.575256 TCCACTTACTTTGAACTAGCGGA 59.425 43.478 0.00 0.00 0.00 5.54
2613 4105 6.415573 ACTTTGAACTAGCGGAAGGATAATT 58.584 36.000 0.00 0.00 0.00 1.40
2622 4114 5.308825 AGCGGAAGGATAATTTATCACCTG 58.691 41.667 16.27 10.73 36.91 4.00
2629 4121 6.613699 AGGATAATTTATCACCTGCCAATGA 58.386 36.000 16.27 0.00 36.91 2.57
2667 4159 5.895636 TGGAAACCATTACTGCATACAAG 57.104 39.130 0.00 0.00 0.00 3.16
2670 4162 6.491745 TGGAAACCATTACTGCATACAAGAAA 59.508 34.615 0.00 0.00 0.00 2.52
2671 4163 7.178274 TGGAAACCATTACTGCATACAAGAAAT 59.822 33.333 0.00 0.00 0.00 2.17
2672 4164 7.489113 GGAAACCATTACTGCATACAAGAAATG 59.511 37.037 0.00 0.00 0.00 2.32
2673 4165 7.701539 AACCATTACTGCATACAAGAAATGA 57.298 32.000 0.00 0.00 0.00 2.57
2677 4169 7.361971 CCATTACTGCATACAAGAAATGACACA 60.362 37.037 0.00 0.00 0.00 3.72
2678 4170 5.618056 ACTGCATACAAGAAATGACACAG 57.382 39.130 0.00 0.00 0.00 3.66
2679 4171 5.065914 ACTGCATACAAGAAATGACACAGT 58.934 37.500 0.00 0.00 32.11 3.55
2680 4172 5.532406 ACTGCATACAAGAAATGACACAGTT 59.468 36.000 0.00 0.00 32.62 3.16
2682 4174 6.437928 TGCATACAAGAAATGACACAGTTTC 58.562 36.000 0.00 0.00 35.18 2.78
2683 4175 6.039159 TGCATACAAGAAATGACACAGTTTCA 59.961 34.615 0.00 0.00 36.92 2.69
2684 4176 6.917477 GCATACAAGAAATGACACAGTTTCAA 59.083 34.615 0.00 0.00 36.92 2.69
2685 4177 7.113965 GCATACAAGAAATGACACAGTTTCAAG 59.886 37.037 0.00 0.00 36.92 3.02
2686 4178 6.515272 ACAAGAAATGACACAGTTTCAAGT 57.485 33.333 0.00 0.00 36.92 3.16
2692 4185 4.448537 TGACACAGTTTCAAGTTTTGGG 57.551 40.909 0.00 0.00 0.00 4.12
2695 4188 3.576550 ACACAGTTTCAAGTTTTGGGTGT 59.423 39.130 0.00 0.00 32.62 4.16
2701 4194 6.816140 CAGTTTCAAGTTTTGGGTGTATGTTT 59.184 34.615 0.00 0.00 0.00 2.83
2708 4201 3.724732 TTGGGTGTATGTTTAGGTCCC 57.275 47.619 0.00 0.00 0.00 4.46
2709 4202 2.633692 TGGGTGTATGTTTAGGTCCCA 58.366 47.619 0.00 0.00 40.70 4.37
2710 4203 3.194620 TGGGTGTATGTTTAGGTCCCAT 58.805 45.455 0.00 0.00 38.51 4.00
2711 4204 3.053991 TGGGTGTATGTTTAGGTCCCATG 60.054 47.826 0.00 0.00 38.51 3.66
2712 4205 2.949644 GGTGTATGTTTAGGTCCCATGC 59.050 50.000 0.00 0.00 0.00 4.06
2716 4209 5.047660 GTGTATGTTTAGGTCCCATGCAAAA 60.048 40.000 0.00 0.00 33.90 2.44
2832 4325 3.126000 AGAGAAAATTCTAGCAGTTGCGC 59.874 43.478 0.00 0.00 41.28 6.09
2855 4348 3.709987 GGCTTTTGGCATAGCAATAGTG 58.290 45.455 19.62 0.00 45.26 2.74
2879 4372 0.585357 TGCGCGCTAGCTACTAGTAC 59.415 55.000 33.29 0.00 42.32 2.73
2882 4375 0.110283 GCGCTAGCTACTAGTACGGC 60.110 60.000 13.93 8.54 41.01 5.68
2891 4384 1.964552 ACTAGTACGGCGCTACATCT 58.035 50.000 6.90 2.66 0.00 2.90
2895 4388 3.351020 AGTACGGCGCTACATCTAAAG 57.649 47.619 6.90 0.00 0.00 1.85
2898 4391 2.968675 ACGGCGCTACATCTAAAGTTT 58.031 42.857 6.90 0.00 0.00 2.66
2899 4392 4.114058 ACGGCGCTACATCTAAAGTTTA 57.886 40.909 6.90 0.00 0.00 2.01
2900 4393 4.110482 ACGGCGCTACATCTAAAGTTTAG 58.890 43.478 15.34 15.34 0.00 1.85
2901 4394 3.060473 CGGCGCTACATCTAAAGTTTAGC 60.060 47.826 16.46 6.73 33.28 3.09
2902 4395 3.869246 GGCGCTACATCTAAAGTTTAGCA 59.131 43.478 16.46 7.34 35.85 3.49
2903 4396 4.025647 GGCGCTACATCTAAAGTTTAGCAG 60.026 45.833 16.46 13.20 35.85 4.24
2904 4397 4.567159 GCGCTACATCTAAAGTTTAGCAGT 59.433 41.667 16.46 17.31 35.85 4.40
2905 4398 5.747197 GCGCTACATCTAAAGTTTAGCAGTA 59.253 40.000 16.46 17.46 35.85 2.74
2907 4400 6.074782 CGCTACATCTAAAGTTTAGCAGTAGC 60.075 42.308 35.01 35.01 44.94 3.58
2908 4401 6.757010 GCTACATCTAAAGTTTAGCAGTAGCA 59.243 38.462 36.83 19.16 46.60 3.49
2909 4402 6.969828 ACATCTAAAGTTTAGCAGTAGCAC 57.030 37.500 16.46 0.00 45.49 4.40
2911 4404 3.924686 TCTAAAGTTTAGCAGTAGCACGC 59.075 43.478 16.46 0.00 45.49 5.34
2913 4406 2.457366 AGTTTAGCAGTAGCACGCTT 57.543 45.000 0.00 0.00 45.49 4.68
2914 4407 2.338500 AGTTTAGCAGTAGCACGCTTC 58.662 47.619 0.00 0.00 45.49 3.86
2915 4408 2.066262 GTTTAGCAGTAGCACGCTTCA 58.934 47.619 0.00 0.00 45.49 3.02
2916 4409 2.672961 TTAGCAGTAGCACGCTTCAT 57.327 45.000 0.00 0.00 45.49 2.57
2917 4410 1.926561 TAGCAGTAGCACGCTTCATG 58.073 50.000 0.00 0.00 45.49 3.07
2918 4411 1.061570 GCAGTAGCACGCTTCATGC 59.938 57.895 0.00 2.03 43.74 4.06
2919 4412 1.638388 GCAGTAGCACGCTTCATGCA 61.638 55.000 14.29 0.00 45.92 3.96
2920 4413 0.798159 CAGTAGCACGCTTCATGCAA 59.202 50.000 0.00 0.00 45.92 4.08
2921 4414 1.197492 CAGTAGCACGCTTCATGCAAA 59.803 47.619 0.00 0.00 45.92 3.68
2922 4415 1.197721 AGTAGCACGCTTCATGCAAAC 59.802 47.619 0.00 0.00 45.92 2.93
2923 4416 1.197721 GTAGCACGCTTCATGCAAACT 59.802 47.619 0.00 0.00 45.92 2.66
2929 4422 2.738846 ACGCTTCATGCAAACTCTACTG 59.261 45.455 0.00 0.00 43.06 2.74
2934 4427 5.065731 GCTTCATGCAAACTCTACTGCTAAT 59.934 40.000 0.00 0.00 42.31 1.73
2952 4445 6.654793 GCTAATTCATATAGCAGTAGCACC 57.345 41.667 0.91 0.00 44.11 5.01
2960 4453 2.762459 CAGTAGCACCGGCCCCTA 60.762 66.667 0.00 0.00 42.56 3.53
2966 4459 4.096003 CACCGGCCCCTACCAGTG 62.096 72.222 0.00 0.00 32.02 3.66
2971 4464 1.993391 GGCCCCTACCAGTGCTACA 60.993 63.158 0.00 0.00 0.00 2.74
2980 4473 5.775701 CCCTACCAGTGCTACAGATAGTTAT 59.224 44.000 0.00 0.00 0.00 1.89
2987 4480 9.069082 CCAGTGCTACAGATAGTTATTAGTAGT 57.931 37.037 0.00 0.00 33.37 2.73
2995 4488 9.558396 ACAGATAGTTATTAGTAGTAACGAGCT 57.442 33.333 9.56 9.56 35.01 4.09
3001 4494 7.720515 AGTTATTAGTAGTAACGAGCTCAGGAT 59.279 37.037 15.40 0.00 37.18 3.24
3005 4498 0.595310 GTAACGAGCTCAGGATCCGC 60.595 60.000 15.40 3.82 0.00 5.54
3011 4504 2.851071 GCTCAGGATCCGCGCTACT 61.851 63.158 5.56 0.00 0.00 2.57
3017 4510 1.202734 AGGATCCGCGCTACTACTACA 60.203 52.381 5.56 0.00 0.00 2.74
3018 4511 1.811359 GGATCCGCGCTACTACTACAT 59.189 52.381 5.56 0.00 0.00 2.29
3019 4512 2.414293 GGATCCGCGCTACTACTACATG 60.414 54.545 5.56 0.00 0.00 3.21
3028 4521 5.852229 GCGCTACTACTACATGTCTGTATTC 59.148 44.000 0.00 0.00 37.24 1.75
3036 4529 9.823647 CTACTACATGTCTGTATTCCATTTCTT 57.176 33.333 0.00 0.00 37.24 2.52
3237 4784 7.677892 ACTCATCATTATAGCACATCACTCAT 58.322 34.615 0.00 0.00 0.00 2.90
3241 4788 8.604890 CATCATTATAGCACATCACTCATCATC 58.395 37.037 0.00 0.00 0.00 2.92
3244 4791 9.595823 CATTATAGCACATCACTCATCATCATA 57.404 33.333 0.00 0.00 0.00 2.15
3276 4826 5.606348 ACAACTCCTCCTCTTCATCATAC 57.394 43.478 0.00 0.00 0.00 2.39
3326 4876 7.880105 TCTTAGCACATGATCATGAGTACTAG 58.120 38.462 36.37 24.16 41.20 2.57
3327 4877 4.880759 AGCACATGATCATGAGTACTAGC 58.119 43.478 36.37 25.06 41.20 3.42
3328 4878 4.588106 AGCACATGATCATGAGTACTAGCT 59.412 41.667 36.37 26.39 41.20 3.32
3329 4879 5.772169 AGCACATGATCATGAGTACTAGCTA 59.228 40.000 36.37 0.00 41.20 3.32
3330 4880 6.072008 AGCACATGATCATGAGTACTAGCTAG 60.072 42.308 36.37 19.44 41.20 3.42
3349 4899 0.105913 GCTAGGACCTGCTACCCTCT 60.106 60.000 3.53 0.00 0.00 3.69
3363 4913 7.256012 CCTGCTACCCTCTCTAAGGTAAAATAG 60.256 44.444 0.00 0.00 44.56 1.73
3420 4970 5.907662 TGGAGAATGGAGATTATCCTGTCTT 59.092 40.000 9.28 0.00 46.33 3.01
3432 4982 0.804989 CCTGTCTTCAATTCGTGGGC 59.195 55.000 0.00 0.00 0.00 5.36
3433 4983 1.611673 CCTGTCTTCAATTCGTGGGCT 60.612 52.381 0.00 0.00 0.00 5.19
3434 4984 2.154462 CTGTCTTCAATTCGTGGGCTT 58.846 47.619 0.00 0.00 0.00 4.35
3435 4985 2.151202 TGTCTTCAATTCGTGGGCTTC 58.849 47.619 0.00 0.00 0.00 3.86
3436 4986 1.128692 GTCTTCAATTCGTGGGCTTCG 59.871 52.381 0.00 0.00 0.00 3.79
3437 4987 0.179189 CTTCAATTCGTGGGCTTCGC 60.179 55.000 0.00 0.00 0.00 4.70
3438 4988 0.886938 TTCAATTCGTGGGCTTCGCA 60.887 50.000 0.00 0.00 0.00 5.10
3439 4989 1.154225 CAATTCGTGGGCTTCGCAC 60.154 57.895 4.23 4.23 42.60 5.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 4.202030 GGTTACAGGAGTTGATCTACCTCG 60.202 50.000 3.54 0.00 0.00 4.63
5 6 6.980416 ATAGGGTTACAGGAGTTGATCTAC 57.020 41.667 0.00 0.00 0.00 2.59
6 7 9.310449 GAATATAGGGTTACAGGAGTTGATCTA 57.690 37.037 0.00 0.00 0.00 1.98
8 9 7.963532 TGAATATAGGGTTACAGGAGTTGATC 58.036 38.462 0.00 0.00 0.00 2.92
9 10 7.931015 TGAATATAGGGTTACAGGAGTTGAT 57.069 36.000 0.00 0.00 0.00 2.57
10 11 7.567250 TGATGAATATAGGGTTACAGGAGTTGA 59.433 37.037 0.00 0.00 0.00 3.18
11 12 7.735917 TGATGAATATAGGGTTACAGGAGTTG 58.264 38.462 0.00 0.00 0.00 3.16
12 13 7.931015 TGATGAATATAGGGTTACAGGAGTT 57.069 36.000 0.00 0.00 0.00 3.01
13 14 7.789831 TCTTGATGAATATAGGGTTACAGGAGT 59.210 37.037 0.00 0.00 0.00 3.85
14 15 8.195165 TCTTGATGAATATAGGGTTACAGGAG 57.805 38.462 0.00 0.00 0.00 3.69
15 16 8.742125 ATCTTGATGAATATAGGGTTACAGGA 57.258 34.615 0.00 0.00 0.00 3.86
16 17 8.597167 TGATCTTGATGAATATAGGGTTACAGG 58.403 37.037 0.00 0.00 0.00 4.00
22 23 9.736414 CTTGATTGATCTTGATGAATATAGGGT 57.264 33.333 0.00 0.00 0.00 4.34
23 24 8.675504 GCTTGATTGATCTTGATGAATATAGGG 58.324 37.037 0.00 0.00 0.00 3.53
24 25 9.227777 TGCTTGATTGATCTTGATGAATATAGG 57.772 33.333 0.00 0.00 0.00 2.57
26 27 9.227777 CCTGCTTGATTGATCTTGATGAATATA 57.772 33.333 0.00 0.00 0.00 0.86
27 28 7.942894 TCCTGCTTGATTGATCTTGATGAATAT 59.057 33.333 0.00 0.00 0.00 1.28
28 29 7.284820 TCCTGCTTGATTGATCTTGATGAATA 58.715 34.615 0.00 0.00 0.00 1.75
29 30 6.127101 TCCTGCTTGATTGATCTTGATGAAT 58.873 36.000 0.00 0.00 0.00 2.57
30 31 5.503002 TCCTGCTTGATTGATCTTGATGAA 58.497 37.500 0.00 0.00 0.00 2.57
31 32 5.106876 TCCTGCTTGATTGATCTTGATGA 57.893 39.130 0.00 0.00 0.00 2.92
32 33 5.357314 ACTTCCTGCTTGATTGATCTTGATG 59.643 40.000 0.00 0.00 0.00 3.07
33 34 5.507637 ACTTCCTGCTTGATTGATCTTGAT 58.492 37.500 0.00 0.00 0.00 2.57
34 35 4.914983 ACTTCCTGCTTGATTGATCTTGA 58.085 39.130 0.00 0.00 0.00 3.02
35 36 5.296283 CCTACTTCCTGCTTGATTGATCTTG 59.704 44.000 0.00 0.00 0.00 3.02
36 37 5.435291 CCTACTTCCTGCTTGATTGATCTT 58.565 41.667 0.00 0.00 0.00 2.40
37 38 4.141528 CCCTACTTCCTGCTTGATTGATCT 60.142 45.833 0.00 0.00 0.00 2.75
38 39 4.133078 CCCTACTTCCTGCTTGATTGATC 58.867 47.826 0.00 0.00 0.00 2.92
39 40 3.525199 ACCCTACTTCCTGCTTGATTGAT 59.475 43.478 0.00 0.00 0.00 2.57
40 41 2.912956 ACCCTACTTCCTGCTTGATTGA 59.087 45.455 0.00 0.00 0.00 2.57
41 42 3.356529 ACCCTACTTCCTGCTTGATTG 57.643 47.619 0.00 0.00 0.00 2.67
42 43 5.717119 AATACCCTACTTCCTGCTTGATT 57.283 39.130 0.00 0.00 0.00 2.57
43 44 5.071923 GGTAATACCCTACTTCCTGCTTGAT 59.928 44.000 0.00 0.00 30.04 2.57
44 45 4.407945 GGTAATACCCTACTTCCTGCTTGA 59.592 45.833 0.00 0.00 30.04 3.02
45 46 4.409247 AGGTAATACCCTACTTCCTGCTTG 59.591 45.833 5.71 0.00 39.75 4.01
46 47 4.632292 AGGTAATACCCTACTTCCTGCTT 58.368 43.478 5.71 0.00 39.75 3.91
47 48 4.224762 GAGGTAATACCCTACTTCCTGCT 58.775 47.826 5.71 0.00 39.75 4.24
48 49 3.005578 CGAGGTAATACCCTACTTCCTGC 59.994 52.174 5.71 0.00 39.75 4.85
49 50 4.467769 TCGAGGTAATACCCTACTTCCTG 58.532 47.826 5.71 0.00 39.75 3.86
50 51 4.803329 TCGAGGTAATACCCTACTTCCT 57.197 45.455 5.71 0.00 39.75 3.36
51 52 6.479884 TCTATCGAGGTAATACCCTACTTCC 58.520 44.000 5.71 0.00 39.75 3.46
52 53 7.393216 TCTCTATCGAGGTAATACCCTACTTC 58.607 42.308 5.71 0.00 39.75 3.01
53 54 7.327064 TCTCTATCGAGGTAATACCCTACTT 57.673 40.000 5.71 0.00 39.75 2.24
54 55 6.070078 CCTCTCTATCGAGGTAATACCCTACT 60.070 46.154 5.71 0.00 44.49 2.57
55 56 6.114767 CCTCTCTATCGAGGTAATACCCTAC 58.885 48.000 5.71 0.00 44.49 3.18
56 57 6.310764 CCTCTCTATCGAGGTAATACCCTA 57.689 45.833 5.71 0.00 44.49 3.53
57 58 5.182169 CCTCTCTATCGAGGTAATACCCT 57.818 47.826 5.71 0.00 44.49 4.34
67 68 0.537600 TTCGGGCCCTCTCTATCGAG 60.538 60.000 22.43 0.00 38.67 4.04
68 69 0.822532 GTTCGGGCCCTCTCTATCGA 60.823 60.000 22.43 6.26 0.00 3.59
69 70 1.660917 GTTCGGGCCCTCTCTATCG 59.339 63.158 22.43 3.44 0.00 2.92
70 71 0.470268 AGGTTCGGGCCCTCTCTATC 60.470 60.000 22.43 2.65 0.00 2.08
71 72 0.760945 CAGGTTCGGGCCCTCTCTAT 60.761 60.000 22.43 0.00 0.00 1.98
72 73 1.381327 CAGGTTCGGGCCCTCTCTA 60.381 63.158 22.43 0.00 0.00 2.43
73 74 2.685380 CAGGTTCGGGCCCTCTCT 60.685 66.667 22.43 9.12 0.00 3.10
74 75 3.787001 CCAGGTTCGGGCCCTCTC 61.787 72.222 22.43 9.34 0.00 3.20
82 83 1.338389 ACGATGTTTACCCAGGTTCGG 60.338 52.381 11.39 0.00 30.52 4.30
83 84 1.730064 CACGATGTTTACCCAGGTTCG 59.270 52.381 6.36 6.36 31.96 3.95
84 85 2.740447 GACACGATGTTTACCCAGGTTC 59.260 50.000 0.00 0.00 0.00 3.62
85 86 2.551504 GGACACGATGTTTACCCAGGTT 60.552 50.000 0.00 0.00 0.00 3.50
86 87 1.002773 GGACACGATGTTTACCCAGGT 59.997 52.381 0.00 0.00 0.00 4.00
87 88 1.677820 GGGACACGATGTTTACCCAGG 60.678 57.143 0.00 0.00 37.50 4.45
88 89 1.677820 GGGGACACGATGTTTACCCAG 60.678 57.143 0.00 0.00 38.30 4.45
89 90 0.325602 GGGGACACGATGTTTACCCA 59.674 55.000 0.00 0.00 38.30 4.51
90 91 0.616891 AGGGGACACGATGTTTACCC 59.383 55.000 13.43 13.43 38.53 3.69
91 92 1.002773 ACAGGGGACACGATGTTTACC 59.997 52.381 0.00 0.00 0.00 2.85
92 93 2.028385 AGACAGGGGACACGATGTTTAC 60.028 50.000 0.00 0.00 0.00 2.01
93 94 2.232941 GAGACAGGGGACACGATGTTTA 59.767 50.000 0.00 0.00 0.00 2.01
94 95 1.002087 GAGACAGGGGACACGATGTTT 59.998 52.381 0.00 0.00 0.00 2.83
95 96 0.608640 GAGACAGGGGACACGATGTT 59.391 55.000 0.00 0.00 0.00 2.71
96 97 1.258445 GGAGACAGGGGACACGATGT 61.258 60.000 0.00 0.00 0.00 3.06
97 98 0.972983 AGGAGACAGGGGACACGATG 60.973 60.000 0.00 0.00 0.00 3.84
98 99 0.972983 CAGGAGACAGGGGACACGAT 60.973 60.000 0.00 0.00 0.00 3.73
99 100 1.606601 CAGGAGACAGGGGACACGA 60.607 63.158 0.00 0.00 0.00 4.35
100 101 1.472662 AACAGGAGACAGGGGACACG 61.473 60.000 0.00 0.00 0.00 4.49
101 102 1.275573 GTAACAGGAGACAGGGGACAC 59.724 57.143 0.00 0.00 0.00 3.67
102 103 1.640917 GTAACAGGAGACAGGGGACA 58.359 55.000 0.00 0.00 0.00 4.02
103 104 0.903236 GGTAACAGGAGACAGGGGAC 59.097 60.000 0.00 0.00 0.00 4.46
104 105 0.252558 GGGTAACAGGAGACAGGGGA 60.253 60.000 0.00 0.00 39.74 4.81
105 106 0.546747 TGGGTAACAGGAGACAGGGG 60.547 60.000 0.00 0.00 39.74 4.79
106 107 1.486726 GATGGGTAACAGGAGACAGGG 59.513 57.143 0.00 0.00 39.74 4.45
107 108 1.137086 CGATGGGTAACAGGAGACAGG 59.863 57.143 0.00 0.00 39.74 4.00
108 109 2.100197 TCGATGGGTAACAGGAGACAG 58.900 52.381 0.00 0.00 39.74 3.51
109 110 2.225382 TCGATGGGTAACAGGAGACA 57.775 50.000 0.00 0.00 39.74 3.41
110 111 2.036089 GGATCGATGGGTAACAGGAGAC 59.964 54.545 0.54 0.00 39.74 3.36
111 112 2.317040 GGATCGATGGGTAACAGGAGA 58.683 52.381 0.54 0.00 39.74 3.71
112 113 2.039418 TGGATCGATGGGTAACAGGAG 58.961 52.381 0.54 0.00 39.74 3.69
113 114 2.168458 TGGATCGATGGGTAACAGGA 57.832 50.000 0.54 0.00 39.74 3.86
114 115 2.368548 TCATGGATCGATGGGTAACAGG 59.631 50.000 16.58 0.00 39.74 4.00
115 116 3.751479 TCATGGATCGATGGGTAACAG 57.249 47.619 16.58 0.00 39.74 3.16
116 117 3.007940 GGATCATGGATCGATGGGTAACA 59.992 47.826 16.58 0.00 39.72 2.41
117 118 3.007940 TGGATCATGGATCGATGGGTAAC 59.992 47.826 16.58 5.25 39.72 2.50
118 119 3.007940 GTGGATCATGGATCGATGGGTAA 59.992 47.826 16.58 0.00 39.72 2.85
119 120 2.567169 GTGGATCATGGATCGATGGGTA 59.433 50.000 16.58 0.00 39.72 3.69
120 121 1.349026 GTGGATCATGGATCGATGGGT 59.651 52.381 16.58 6.98 39.72 4.51
121 122 1.348696 TGTGGATCATGGATCGATGGG 59.651 52.381 16.58 0.00 39.72 4.00
122 123 2.696506 CTGTGGATCATGGATCGATGG 58.303 52.381 16.58 0.21 39.72 3.51
123 124 2.074576 GCTGTGGATCATGGATCGATG 58.925 52.381 11.21 11.21 39.72 3.84
124 125 1.976404 AGCTGTGGATCATGGATCGAT 59.024 47.619 0.00 0.00 39.72 3.59
125 126 1.417288 AGCTGTGGATCATGGATCGA 58.583 50.000 0.00 0.00 39.72 3.59
126 127 1.871676 CAAGCTGTGGATCATGGATCG 59.128 52.381 0.00 0.00 39.72 3.69
138 139 0.322546 GTAGGGGGTTCCAAGCTGTG 60.323 60.000 0.00 0.00 38.24 3.66
139 140 1.498176 GGTAGGGGGTTCCAAGCTGT 61.498 60.000 0.00 0.00 38.24 4.40
140 141 1.303282 GGTAGGGGGTTCCAAGCTG 59.697 63.158 0.00 0.00 38.24 4.24
141 142 1.929088 GGGTAGGGGGTTCCAAGCT 60.929 63.158 0.00 0.00 38.24 3.74
142 143 2.681591 GGGTAGGGGGTTCCAAGC 59.318 66.667 0.00 0.00 38.24 4.01
143 144 1.614226 TCGGGTAGGGGGTTCCAAG 60.614 63.158 0.00 0.00 38.24 3.61
144 145 1.614226 CTCGGGTAGGGGGTTCCAA 60.614 63.158 0.00 0.00 38.24 3.53
145 146 1.893588 ATCTCGGGTAGGGGGTTCCA 61.894 60.000 0.00 0.00 38.24 3.53
146 147 1.074699 ATCTCGGGTAGGGGGTTCC 60.075 63.158 0.00 0.00 0.00 3.62
147 148 0.105607 AGATCTCGGGTAGGGGGTTC 60.106 60.000 0.00 0.00 0.00 3.62
148 149 0.398664 CAGATCTCGGGTAGGGGGTT 60.399 60.000 0.00 0.00 0.00 4.11
149 150 1.233369 CAGATCTCGGGTAGGGGGT 59.767 63.158 0.00 0.00 0.00 4.95
150 151 2.210711 GCAGATCTCGGGTAGGGGG 61.211 68.421 0.00 0.00 0.00 5.40
151 152 2.210711 GGCAGATCTCGGGTAGGGG 61.211 68.421 0.00 0.00 0.00 4.79
152 153 2.565645 CGGCAGATCTCGGGTAGGG 61.566 68.421 0.00 0.00 0.00 3.53
153 154 2.565645 CCGGCAGATCTCGGGTAGG 61.566 68.421 13.71 0.00 42.32 3.18
154 155 1.392710 AACCGGCAGATCTCGGGTAG 61.393 60.000 22.66 0.00 45.54 3.18
155 156 0.974010 AAACCGGCAGATCTCGGGTA 60.974 55.000 22.66 0.00 46.82 3.69
159 160 0.721718 GTCAAAACCGGCAGATCTCG 59.278 55.000 0.00 0.00 0.00 4.04
160 161 1.464997 GTGTCAAAACCGGCAGATCTC 59.535 52.381 0.00 0.00 0.00 2.75
161 162 1.523758 GTGTCAAAACCGGCAGATCT 58.476 50.000 0.00 0.00 0.00 2.75
162 163 0.521735 GGTGTCAAAACCGGCAGATC 59.478 55.000 0.00 0.00 0.00 2.75
163 164 2.641197 GGTGTCAAAACCGGCAGAT 58.359 52.632 0.00 0.00 0.00 2.90
164 165 4.150994 GGTGTCAAAACCGGCAGA 57.849 55.556 0.00 0.00 0.00 4.26
170 171 1.679153 ACCATTGTCGGTGTCAAAACC 59.321 47.619 0.00 0.00 38.07 3.27
183 184 1.820519 GCCATGTCATGACACCATTGT 59.179 47.619 30.09 11.12 45.05 2.71
184 185 1.819903 TGCCATGTCATGACACCATTG 59.180 47.619 30.09 22.58 45.05 2.82
185 186 1.820519 GTGCCATGTCATGACACCATT 59.179 47.619 30.09 12.29 45.05 3.16
186 187 1.272037 TGTGCCATGTCATGACACCAT 60.272 47.619 30.09 12.68 42.12 3.55
187 188 0.110104 TGTGCCATGTCATGACACCA 59.890 50.000 30.09 22.49 42.12 4.17
188 189 1.466856 ATGTGCCATGTCATGACACC 58.533 50.000 30.09 20.36 42.12 4.16
189 190 7.854557 ATATATATGTGCCATGTCATGACAC 57.145 36.000 30.09 21.53 45.05 3.67
190 191 7.884354 ACAATATATATGTGCCATGTCATGACA 59.116 33.333 29.67 29.67 46.44 3.58
191 192 8.179615 CACAATATATATGTGCCATGTCATGAC 58.820 37.037 19.27 19.27 41.42 3.06
192 193 7.337436 CCACAATATATATGTGCCATGTCATGA 59.663 37.037 14.67 0.00 45.32 3.07
193 194 7.121611 ACCACAATATATATGTGCCATGTCATG 59.878 37.037 16.35 5.79 45.32 3.07
194 195 7.177184 ACCACAATATATATGTGCCATGTCAT 58.823 34.615 16.35 0.00 45.32 3.06
195 196 6.541907 ACCACAATATATATGTGCCATGTCA 58.458 36.000 16.35 0.00 45.32 3.58
196 197 8.560355 TTACCACAATATATATGTGCCATGTC 57.440 34.615 16.35 0.00 45.32 3.06
197 198 8.932434 TTTACCACAATATATATGTGCCATGT 57.068 30.769 16.35 12.85 45.32 3.21
228 229 9.084533 TGTACTAAAGTTTGCCTTAAATTGGAT 57.915 29.630 0.00 0.00 31.48 3.41
229 230 8.466617 TGTACTAAAGTTTGCCTTAAATTGGA 57.533 30.769 0.00 0.00 31.48 3.53
230 231 9.191995 CTTGTACTAAAGTTTGCCTTAAATTGG 57.808 33.333 0.00 0.00 31.48 3.16
231 232 8.699749 GCTTGTACTAAAGTTTGCCTTAAATTG 58.300 33.333 0.00 0.00 31.48 2.32
232 233 7.870954 GGCTTGTACTAAAGTTTGCCTTAAATT 59.129 33.333 0.00 0.00 36.52 1.82
233 234 7.232737 AGGCTTGTACTAAAGTTTGCCTTAAAT 59.767 33.333 7.40 0.00 46.04 1.40
234 235 6.548251 AGGCTTGTACTAAAGTTTGCCTTAAA 59.452 34.615 7.40 0.00 46.04 1.52
235 236 6.066032 AGGCTTGTACTAAAGTTTGCCTTAA 58.934 36.000 7.40 0.00 46.04 1.85
236 237 5.627135 AGGCTTGTACTAAAGTTTGCCTTA 58.373 37.500 7.40 0.00 46.04 2.69
237 238 4.470602 AGGCTTGTACTAAAGTTTGCCTT 58.529 39.130 7.40 0.00 46.04 4.35
238 239 4.100279 AGGCTTGTACTAAAGTTTGCCT 57.900 40.909 7.40 7.40 43.81 4.75
239 240 4.072839 AGAGGCTTGTACTAAAGTTTGCC 58.927 43.478 0.00 0.43 39.40 4.52
240 241 5.690997 AAGAGGCTTGTACTAAAGTTTGC 57.309 39.130 0.00 0.00 0.00 3.68
241 242 7.724305 TGTAAGAGGCTTGTACTAAAGTTTG 57.276 36.000 0.00 0.00 0.00 2.93
242 243 8.741603 TTTGTAAGAGGCTTGTACTAAAGTTT 57.258 30.769 9.19 0.00 0.00 2.66
243 244 8.919777 ATTTGTAAGAGGCTTGTACTAAAGTT 57.080 30.769 9.19 0.00 0.00 2.66
244 245 7.331193 CGATTTGTAAGAGGCTTGTACTAAAGT 59.669 37.037 9.19 0.00 0.00 2.66
245 246 7.331193 ACGATTTGTAAGAGGCTTGTACTAAAG 59.669 37.037 9.19 8.73 0.00 1.85
246 247 7.156673 ACGATTTGTAAGAGGCTTGTACTAAA 58.843 34.615 9.19 8.35 0.00 1.85
247 248 6.694447 ACGATTTGTAAGAGGCTTGTACTAA 58.306 36.000 9.19 8.30 0.00 2.24
248 249 6.276832 ACGATTTGTAAGAGGCTTGTACTA 57.723 37.500 9.19 0.89 0.00 1.82
249 250 5.148651 ACGATTTGTAAGAGGCTTGTACT 57.851 39.130 9.19 0.00 0.00 2.73
250 251 5.005490 GCTACGATTTGTAAGAGGCTTGTAC 59.995 44.000 0.00 0.00 31.20 2.90
251 252 5.105473 AGCTACGATTTGTAAGAGGCTTGTA 60.105 40.000 0.00 0.00 29.36 2.41
252 253 3.933332 GCTACGATTTGTAAGAGGCTTGT 59.067 43.478 0.00 0.00 31.20 3.16
253 254 4.184629 AGCTACGATTTGTAAGAGGCTTG 58.815 43.478 0.00 0.00 29.36 4.01
254 255 4.473477 AGCTACGATTTGTAAGAGGCTT 57.527 40.909 0.00 0.00 29.36 4.35
255 256 4.081642 TGAAGCTACGATTTGTAAGAGGCT 60.082 41.667 0.00 0.00 33.63 4.58
256 257 4.033014 GTGAAGCTACGATTTGTAAGAGGC 59.967 45.833 0.00 0.00 31.20 4.70
257 258 5.062308 GTGTGAAGCTACGATTTGTAAGAGG 59.938 44.000 0.00 0.00 31.20 3.69
258 259 5.633601 TGTGTGAAGCTACGATTTGTAAGAG 59.366 40.000 0.00 0.00 31.20 2.85
259 260 5.534407 TGTGTGAAGCTACGATTTGTAAGA 58.466 37.500 0.00 0.00 31.20 2.10
260 261 5.839262 TGTGTGAAGCTACGATTTGTAAG 57.161 39.130 0.00 0.00 31.20 2.34
261 262 5.986741 TCTTGTGTGAAGCTACGATTTGTAA 59.013 36.000 0.00 0.00 31.20 2.41
262 263 5.534407 TCTTGTGTGAAGCTACGATTTGTA 58.466 37.500 0.00 0.00 0.00 2.41
263 264 4.377021 TCTTGTGTGAAGCTACGATTTGT 58.623 39.130 0.00 0.00 0.00 2.83
264 265 4.990543 TCTTGTGTGAAGCTACGATTTG 57.009 40.909 0.00 0.00 0.00 2.32
265 266 5.057149 ACTTCTTGTGTGAAGCTACGATTT 58.943 37.500 4.41 0.00 45.20 2.17
266 267 4.632153 ACTTCTTGTGTGAAGCTACGATT 58.368 39.130 4.41 0.00 45.20 3.34
267 268 4.258702 ACTTCTTGTGTGAAGCTACGAT 57.741 40.909 4.41 0.00 45.20 3.73
268 269 3.728076 ACTTCTTGTGTGAAGCTACGA 57.272 42.857 4.41 0.00 45.20 3.43
269 270 4.606232 CGAAACTTCTTGTGTGAAGCTACG 60.606 45.833 4.41 4.42 45.20 3.51
270 271 4.270325 ACGAAACTTCTTGTGTGAAGCTAC 59.730 41.667 4.41 0.00 45.20 3.58
271 272 4.270084 CACGAAACTTCTTGTGTGAAGCTA 59.730 41.667 4.41 0.00 45.20 3.32
272 273 3.063997 CACGAAACTTCTTGTGTGAAGCT 59.936 43.478 4.41 0.00 45.20 3.74
273 274 3.063452 TCACGAAACTTCTTGTGTGAAGC 59.937 43.478 4.41 0.00 45.20 3.86
274 275 4.857871 TCACGAAACTTCTTGTGTGAAG 57.142 40.909 0.00 0.00 46.33 3.02
275 276 5.568482 CAATCACGAAACTTCTTGTGTGAA 58.432 37.500 0.00 0.00 39.49 3.18
276 277 4.495679 GCAATCACGAAACTTCTTGTGTGA 60.496 41.667 0.00 0.00 40.24 3.58
277 278 3.725740 GCAATCACGAAACTTCTTGTGTG 59.274 43.478 0.00 0.00 34.08 3.82
278 279 3.546020 CGCAATCACGAAACTTCTTGTGT 60.546 43.478 0.00 0.00 34.08 3.72
279 280 2.966708 CGCAATCACGAAACTTCTTGTG 59.033 45.455 0.00 0.00 34.06 3.33
280 281 2.869801 TCGCAATCACGAAACTTCTTGT 59.130 40.909 0.00 0.00 39.54 3.16
281 282 3.519908 TCGCAATCACGAAACTTCTTG 57.480 42.857 0.00 0.00 39.54 3.02
282 283 4.330074 CCTATCGCAATCACGAAACTTCTT 59.670 41.667 0.00 0.00 46.59 2.52
283 284 3.865745 CCTATCGCAATCACGAAACTTCT 59.134 43.478 0.00 0.00 46.59 2.85
284 285 3.001330 CCCTATCGCAATCACGAAACTTC 59.999 47.826 0.00 0.00 46.59 3.01
285 286 2.936498 CCCTATCGCAATCACGAAACTT 59.064 45.455 0.00 0.00 46.59 2.66
286 287 2.167693 TCCCTATCGCAATCACGAAACT 59.832 45.455 0.00 0.00 46.59 2.66
287 288 2.546778 TCCCTATCGCAATCACGAAAC 58.453 47.619 0.00 0.00 46.59 2.78
288 289 2.971660 TCCCTATCGCAATCACGAAA 57.028 45.000 0.00 0.00 46.59 3.46
289 290 2.971660 TTCCCTATCGCAATCACGAA 57.028 45.000 0.00 0.00 46.59 3.85
291 292 2.285220 CACTTTCCCTATCGCAATCACG 59.715 50.000 0.00 0.00 0.00 4.35
292 293 3.270877 ACACTTTCCCTATCGCAATCAC 58.729 45.455 0.00 0.00 0.00 3.06
293 294 3.055458 TGACACTTTCCCTATCGCAATCA 60.055 43.478 0.00 0.00 0.00 2.57
294 295 3.309954 GTGACACTTTCCCTATCGCAATC 59.690 47.826 0.00 0.00 0.00 2.67
295 296 3.055094 AGTGACACTTTCCCTATCGCAAT 60.055 43.478 1.07 0.00 0.00 3.56
296 297 2.301870 AGTGACACTTTCCCTATCGCAA 59.698 45.455 1.07 0.00 0.00 4.85
297 298 1.899814 AGTGACACTTTCCCTATCGCA 59.100 47.619 1.07 0.00 0.00 5.10
298 299 2.673368 CAAGTGACACTTTCCCTATCGC 59.327 50.000 18.27 0.00 36.03 4.58
299 300 3.262420 CCAAGTGACACTTTCCCTATCG 58.738 50.000 18.27 4.75 36.03 2.92
300 301 3.010420 GCCAAGTGACACTTTCCCTATC 58.990 50.000 18.27 0.00 36.03 2.08
301 302 2.644798 AGCCAAGTGACACTTTCCCTAT 59.355 45.455 18.27 0.00 36.03 2.57
302 303 2.054799 AGCCAAGTGACACTTTCCCTA 58.945 47.619 18.27 0.00 36.03 3.53
303 304 0.846693 AGCCAAGTGACACTTTCCCT 59.153 50.000 18.27 11.35 36.03 4.20
304 305 1.692411 AAGCCAAGTGACACTTTCCC 58.308 50.000 18.27 9.36 36.03 3.97
305 306 3.801114 AAAAGCCAAGTGACACTTTCC 57.199 42.857 18.27 11.71 36.03 3.13
306 307 5.041287 GGTAAAAAGCCAAGTGACACTTTC 58.959 41.667 18.27 12.67 36.03 2.62
307 308 4.142026 GGGTAAAAAGCCAAGTGACACTTT 60.142 41.667 18.27 4.98 36.03 2.66
308 309 3.383505 GGGTAAAAAGCCAAGTGACACTT 59.616 43.478 15.23 15.23 39.39 3.16
309 310 2.956333 GGGTAAAAAGCCAAGTGACACT 59.044 45.455 1.07 1.07 0.00 3.55
310 311 2.287368 CGGGTAAAAAGCCAAGTGACAC 60.287 50.000 0.00 0.00 0.00 3.67
311 312 1.950909 CGGGTAAAAAGCCAAGTGACA 59.049 47.619 0.00 0.00 0.00 3.58
312 313 1.335597 GCGGGTAAAAAGCCAAGTGAC 60.336 52.381 0.00 0.00 0.00 3.67
313 314 0.955905 GCGGGTAAAAAGCCAAGTGA 59.044 50.000 0.00 0.00 0.00 3.41
314 315 0.671251 TGCGGGTAAAAAGCCAAGTG 59.329 50.000 0.00 0.00 0.00 3.16
315 316 0.671796 GTGCGGGTAAAAAGCCAAGT 59.328 50.000 0.00 0.00 0.00 3.16
316 317 0.386731 CGTGCGGGTAAAAAGCCAAG 60.387 55.000 0.00 0.00 0.00 3.61
317 318 1.102222 ACGTGCGGGTAAAAAGCCAA 61.102 50.000 0.00 0.00 0.00 4.52
318 319 1.508808 GACGTGCGGGTAAAAAGCCA 61.509 55.000 0.00 0.00 0.00 4.75
319 320 1.208358 GACGTGCGGGTAAAAAGCC 59.792 57.895 0.00 0.00 0.00 4.35
320 321 1.154543 CGACGTGCGGGTAAAAAGC 60.155 57.895 0.00 0.00 36.03 3.51
321 322 1.154543 GCGACGTGCGGGTAAAAAG 60.155 57.895 0.00 0.00 41.29 2.27
322 323 2.937486 GCGACGTGCGGGTAAAAA 59.063 55.556 0.00 0.00 41.29 1.94
380 381 9.758651 ACGACACTTATATTTATCTATGTTGCA 57.241 29.630 0.00 0.00 0.00 4.08
408 409 9.486123 TGAACCCTGAATAATTCCATATTTCAA 57.514 29.630 0.00 0.00 0.00 2.69
409 410 9.659135 ATGAACCCTGAATAATTCCATATTTCA 57.341 29.630 0.00 0.00 0.00 2.69
413 414 8.873144 CCAAATGAACCCTGAATAATTCCATAT 58.127 33.333 0.00 0.00 0.00 1.78
414 415 7.201992 GCCAAATGAACCCTGAATAATTCCATA 60.202 37.037 0.00 0.00 0.00 2.74
415 416 6.408434 GCCAAATGAACCCTGAATAATTCCAT 60.408 38.462 0.00 0.00 0.00 3.41
416 417 5.104982 GCCAAATGAACCCTGAATAATTCCA 60.105 40.000 0.00 0.00 0.00 3.53
417 418 5.129320 AGCCAAATGAACCCTGAATAATTCC 59.871 40.000 0.00 0.00 0.00 3.01
418 419 6.225981 AGCCAAATGAACCCTGAATAATTC 57.774 37.500 0.00 0.00 0.00 2.17
419 420 6.625532 AAGCCAAATGAACCCTGAATAATT 57.374 33.333 0.00 0.00 0.00 1.40
420 421 6.625532 AAAGCCAAATGAACCCTGAATAAT 57.374 33.333 0.00 0.00 0.00 1.28
421 422 6.432403 AAAAGCCAAATGAACCCTGAATAA 57.568 33.333 0.00 0.00 0.00 1.40
422 423 6.432403 AAAAAGCCAAATGAACCCTGAATA 57.568 33.333 0.00 0.00 0.00 1.75
423 424 4.980339 AAAAGCCAAATGAACCCTGAAT 57.020 36.364 0.00 0.00 0.00 2.57
424 425 4.769345 AAAAAGCCAAATGAACCCTGAA 57.231 36.364 0.00 0.00 0.00 3.02
425 426 6.495181 TGTATAAAAAGCCAAATGAACCCTGA 59.505 34.615 0.00 0.00 0.00 3.86
426 427 6.696411 TGTATAAAAAGCCAAATGAACCCTG 58.304 36.000 0.00 0.00 0.00 4.45
427 428 6.926630 TGTATAAAAAGCCAAATGAACCCT 57.073 33.333 0.00 0.00 0.00 4.34
428 429 9.660180 TTAATGTATAAAAAGCCAAATGAACCC 57.340 29.630 0.00 0.00 0.00 4.11
490 491 9.409312 CACTGAAACATGTGCTTATAATTCAAA 57.591 29.630 0.00 0.00 0.00 2.69
491 492 8.028354 CCACTGAAACATGTGCTTATAATTCAA 58.972 33.333 0.00 0.00 33.26 2.69
492 493 7.392953 TCCACTGAAACATGTGCTTATAATTCA 59.607 33.333 0.00 2.01 33.26 2.57
493 494 7.698130 GTCCACTGAAACATGTGCTTATAATTC 59.302 37.037 0.00 0.00 33.26 2.17
494 495 7.362920 GGTCCACTGAAACATGTGCTTATAATT 60.363 37.037 0.00 0.00 33.26 1.40
495 496 6.095440 GGTCCACTGAAACATGTGCTTATAAT 59.905 38.462 0.00 0.00 33.26 1.28
496 497 5.414454 GGTCCACTGAAACATGTGCTTATAA 59.586 40.000 0.00 0.00 33.26 0.98
497 498 4.941263 GGTCCACTGAAACATGTGCTTATA 59.059 41.667 0.00 0.00 33.26 0.98
498 499 3.758554 GGTCCACTGAAACATGTGCTTAT 59.241 43.478 0.00 0.00 33.26 1.73
499 500 3.146066 GGTCCACTGAAACATGTGCTTA 58.854 45.455 0.00 0.00 33.26 3.09
500 501 1.956477 GGTCCACTGAAACATGTGCTT 59.044 47.619 0.00 0.00 33.26 3.91
501 502 1.133823 TGGTCCACTGAAACATGTGCT 60.134 47.619 0.00 0.00 33.26 4.40
502 503 1.317613 TGGTCCACTGAAACATGTGC 58.682 50.000 0.00 0.00 33.26 4.57
503 504 4.383850 TTTTGGTCCACTGAAACATGTG 57.616 40.909 0.00 0.00 0.00 3.21
504 505 4.202243 CCATTTTGGTCCACTGAAACATGT 60.202 41.667 0.00 0.00 31.35 3.21
505 506 4.039004 TCCATTTTGGTCCACTGAAACATG 59.961 41.667 0.00 0.00 39.03 3.21
506 507 4.222336 TCCATTTTGGTCCACTGAAACAT 58.778 39.130 0.00 0.00 39.03 2.71
507 508 3.636679 TCCATTTTGGTCCACTGAAACA 58.363 40.909 0.00 0.00 39.03 2.83
508 509 4.664150 TTCCATTTTGGTCCACTGAAAC 57.336 40.909 0.00 0.00 39.03 2.78
509 510 6.985653 TTATTCCATTTTGGTCCACTGAAA 57.014 33.333 0.00 0.00 39.03 2.69
510 511 7.671819 TGTATTATTCCATTTTGGTCCACTGAA 59.328 33.333 0.00 0.00 39.03 3.02
511 512 7.178573 TGTATTATTCCATTTTGGTCCACTGA 58.821 34.615 0.00 0.00 39.03 3.41
512 513 7.403312 TGTATTATTCCATTTTGGTCCACTG 57.597 36.000 0.00 0.00 39.03 3.66
513 514 7.417797 GCATGTATTATTCCATTTTGGTCCACT 60.418 37.037 0.00 0.00 39.03 4.00
514 515 6.701400 GCATGTATTATTCCATTTTGGTCCAC 59.299 38.462 0.00 0.00 39.03 4.02
515 516 6.460814 CGCATGTATTATTCCATTTTGGTCCA 60.461 38.462 0.00 0.00 39.03 4.02
516 517 5.920273 CGCATGTATTATTCCATTTTGGTCC 59.080 40.000 0.00 0.00 39.03 4.46
517 518 5.920273 CCGCATGTATTATTCCATTTTGGTC 59.080 40.000 0.00 0.00 39.03 4.02
518 519 5.738783 GCCGCATGTATTATTCCATTTTGGT 60.739 40.000 0.00 0.00 39.03 3.67
519 520 4.685628 GCCGCATGTATTATTCCATTTTGG 59.314 41.667 0.00 0.00 39.43 3.28
520 521 4.685628 GGCCGCATGTATTATTCCATTTTG 59.314 41.667 0.00 0.00 0.00 2.44
521 522 4.343526 TGGCCGCATGTATTATTCCATTTT 59.656 37.500 0.00 0.00 0.00 1.82
522 523 3.894427 TGGCCGCATGTATTATTCCATTT 59.106 39.130 0.00 0.00 0.00 2.32
523 524 3.495331 TGGCCGCATGTATTATTCCATT 58.505 40.909 0.00 0.00 0.00 3.16
524 525 3.153369 TGGCCGCATGTATTATTCCAT 57.847 42.857 0.00 0.00 0.00 3.41
525 526 2.647683 TGGCCGCATGTATTATTCCA 57.352 45.000 0.00 0.00 0.00 3.53
526 527 2.819608 ACATGGCCGCATGTATTATTCC 59.180 45.455 6.92 0.00 43.27 3.01
527 528 3.253188 ACACATGGCCGCATGTATTATTC 59.747 43.478 8.31 0.00 43.24 1.75
528 529 3.004629 CACACATGGCCGCATGTATTATT 59.995 43.478 8.31 0.00 43.24 1.40
529 530 2.553602 CACACATGGCCGCATGTATTAT 59.446 45.455 8.31 0.00 43.24 1.28
530 531 1.946081 CACACATGGCCGCATGTATTA 59.054 47.619 8.31 0.00 43.24 0.98
531 532 0.740149 CACACATGGCCGCATGTATT 59.260 50.000 8.31 0.00 43.24 1.89
532 533 0.394216 ACACACATGGCCGCATGTAT 60.394 50.000 8.31 0.00 43.24 2.29
533 534 0.250513 TACACACATGGCCGCATGTA 59.749 50.000 8.31 4.96 43.24 2.29
534 535 1.002746 TACACACATGGCCGCATGT 60.003 52.632 2.88 2.88 45.70 3.21
535 536 1.429021 GTACACACATGGCCGCATG 59.571 57.895 0.00 0.00 38.46 4.06
536 537 1.748879 GGTACACACATGGCCGCAT 60.749 57.895 0.00 0.00 0.00 4.73
537 538 2.359354 GGTACACACATGGCCGCA 60.359 61.111 0.00 0.00 0.00 5.69
538 539 2.359354 TGGTACACACATGGCCGC 60.359 61.111 0.00 0.00 0.00 6.53
550 551 4.038763 GGGCCCTATTAGCAAAAATGGTAC 59.961 45.833 17.04 0.00 0.00 3.34
551 552 4.078863 AGGGCCCTATTAGCAAAAATGGTA 60.079 41.667 27.42 0.00 0.00 3.25
552 553 3.038280 GGGCCCTATTAGCAAAAATGGT 58.962 45.455 17.04 0.00 0.00 3.55
553 554 3.308401 AGGGCCCTATTAGCAAAAATGG 58.692 45.455 27.42 0.00 0.00 3.16
554 555 4.443315 CCAAGGGCCCTATTAGCAAAAATG 60.443 45.833 28.96 14.97 0.00 2.32
555 556 3.711190 CCAAGGGCCCTATTAGCAAAAAT 59.289 43.478 28.96 0.20 0.00 1.82
556 557 3.103742 CCAAGGGCCCTATTAGCAAAAA 58.896 45.455 28.96 0.00 0.00 1.94
557 558 2.625617 CCCAAGGGCCCTATTAGCAAAA 60.626 50.000 28.96 0.00 0.00 2.44
558 559 1.063266 CCCAAGGGCCCTATTAGCAAA 60.063 52.381 28.96 0.00 0.00 3.68
559 560 0.555769 CCCAAGGGCCCTATTAGCAA 59.444 55.000 28.96 0.00 0.00 3.91
560 561 0.626277 ACCCAAGGGCCCTATTAGCA 60.626 55.000 28.96 0.00 39.32 3.49
561 562 0.110678 GACCCAAGGGCCCTATTAGC 59.889 60.000 28.96 11.64 39.32 3.09
562 563 0.771755 GGACCCAAGGGCCCTATTAG 59.228 60.000 28.96 17.03 34.73 1.73
563 564 1.057851 CGGACCCAAGGGCCCTATTA 61.058 60.000 28.96 0.00 35.49 0.98
564 565 2.383601 CGGACCCAAGGGCCCTATT 61.384 63.158 28.96 7.70 35.49 1.73
565 566 2.772622 CGGACCCAAGGGCCCTAT 60.773 66.667 28.96 13.11 35.49 2.57
571 572 3.361977 CAAACGCGGACCCAAGGG 61.362 66.667 12.47 2.91 42.03 3.95
572 573 4.038080 GCAAACGCGGACCCAAGG 62.038 66.667 12.47 0.00 0.00 3.61
573 574 2.966309 GAGCAAACGCGGACCCAAG 61.966 63.158 12.47 0.00 0.00 3.61
574 575 2.975799 GAGCAAACGCGGACCCAA 60.976 61.111 12.47 0.00 0.00 4.12
577 578 3.774702 GTCGAGCAAACGCGGACC 61.775 66.667 12.47 0.00 39.79 4.46
578 579 3.774702 GGTCGAGCAAACGCGGAC 61.775 66.667 12.47 5.92 39.79 4.79
583 584 3.479269 GAGGCGGTCGAGCAAACG 61.479 66.667 15.89 2.37 39.27 3.60
584 585 3.119096 GGAGGCGGTCGAGCAAAC 61.119 66.667 15.89 3.77 39.27 2.93
585 586 4.735132 CGGAGGCGGTCGAGCAAA 62.735 66.667 15.89 0.00 39.27 3.68
592 593 2.025727 CATACGACGGAGGCGGTC 59.974 66.667 0.00 0.00 0.00 4.79
593 594 4.203076 GCATACGACGGAGGCGGT 62.203 66.667 0.00 0.00 0.00 5.68
594 595 3.825833 GAGCATACGACGGAGGCGG 62.826 68.421 11.55 0.00 0.00 6.13
595 596 2.353607 GAGCATACGACGGAGGCG 60.354 66.667 11.55 0.00 0.00 5.52
596 597 2.353607 CGAGCATACGACGGAGGC 60.354 66.667 9.06 9.06 35.09 4.70
600 601 0.030235 TCATTCCGAGCATACGACGG 59.970 55.000 0.00 0.00 46.71 4.79
601 602 2.051879 ATCATTCCGAGCATACGACG 57.948 50.000 0.00 0.00 35.09 5.12
602 603 3.123804 ACAATCATTCCGAGCATACGAC 58.876 45.455 0.00 0.00 35.09 4.34
603 604 3.452755 ACAATCATTCCGAGCATACGA 57.547 42.857 0.00 0.00 35.09 3.43
604 605 4.434725 GCATACAATCATTCCGAGCATACG 60.435 45.833 0.00 0.00 0.00 3.06
605 606 4.434725 CGCATACAATCATTCCGAGCATAC 60.435 45.833 0.00 0.00 0.00 2.39
606 607 3.679502 CGCATACAATCATTCCGAGCATA 59.320 43.478 0.00 0.00 0.00 3.14
607 608 2.481568 CGCATACAATCATTCCGAGCAT 59.518 45.455 0.00 0.00 0.00 3.79
608 609 1.866601 CGCATACAATCATTCCGAGCA 59.133 47.619 0.00 0.00 0.00 4.26
609 610 1.867233 ACGCATACAATCATTCCGAGC 59.133 47.619 0.00 0.00 0.00 5.03
610 611 2.221749 CCACGCATACAATCATTCCGAG 59.778 50.000 0.00 0.00 0.00 4.63
611 612 2.159028 TCCACGCATACAATCATTCCGA 60.159 45.455 0.00 0.00 0.00 4.55
612 613 2.209273 TCCACGCATACAATCATTCCG 58.791 47.619 0.00 0.00 0.00 4.30
613 614 4.836125 ATTCCACGCATACAATCATTCC 57.164 40.909 0.00 0.00 0.00 3.01
614 615 7.584108 TCATAATTCCACGCATACAATCATTC 58.416 34.615 0.00 0.00 0.00 2.67
615 616 7.229306 ACTCATAATTCCACGCATACAATCATT 59.771 33.333 0.00 0.00 0.00 2.57
616 617 6.712095 ACTCATAATTCCACGCATACAATCAT 59.288 34.615 0.00 0.00 0.00 2.45
617 618 6.054941 ACTCATAATTCCACGCATACAATCA 58.945 36.000 0.00 0.00 0.00 2.57
618 619 6.545504 ACTCATAATTCCACGCATACAATC 57.454 37.500 0.00 0.00 0.00 2.67
619 620 6.728200 CAACTCATAATTCCACGCATACAAT 58.272 36.000 0.00 0.00 0.00 2.71
620 621 5.448496 GCAACTCATAATTCCACGCATACAA 60.448 40.000 0.00 0.00 0.00 2.41
621 622 4.035091 GCAACTCATAATTCCACGCATACA 59.965 41.667 0.00 0.00 0.00 2.29
622 623 4.273480 AGCAACTCATAATTCCACGCATAC 59.727 41.667 0.00 0.00 0.00 2.39
623 624 4.450976 AGCAACTCATAATTCCACGCATA 58.549 39.130 0.00 0.00 0.00 3.14
624 625 3.282021 AGCAACTCATAATTCCACGCAT 58.718 40.909 0.00 0.00 0.00 4.73
625 626 2.710377 AGCAACTCATAATTCCACGCA 58.290 42.857 0.00 0.00 0.00 5.24
626 627 3.621268 TGTAGCAACTCATAATTCCACGC 59.379 43.478 0.00 0.00 0.00 5.34
627 628 5.794687 TTGTAGCAACTCATAATTCCACG 57.205 39.130 0.00 0.00 0.00 4.94
628 629 8.129211 GGTTATTGTAGCAACTCATAATTCCAC 58.871 37.037 0.00 0.00 0.00 4.02
629 630 7.831690 TGGTTATTGTAGCAACTCATAATTCCA 59.168 33.333 0.00 0.00 0.00 3.53
630 631 8.220755 TGGTTATTGTAGCAACTCATAATTCC 57.779 34.615 0.00 0.00 0.00 3.01
633 634 9.407380 TCATTGGTTATTGTAGCAACTCATAAT 57.593 29.630 0.00 0.00 38.23 1.28
634 635 8.800370 TCATTGGTTATTGTAGCAACTCATAA 57.200 30.769 0.00 0.00 38.23 1.90
635 636 8.264347 TCTCATTGGTTATTGTAGCAACTCATA 58.736 33.333 0.00 0.00 38.23 2.15
636 637 7.112122 TCTCATTGGTTATTGTAGCAACTCAT 58.888 34.615 0.00 0.00 38.23 2.90
637 638 6.472016 TCTCATTGGTTATTGTAGCAACTCA 58.528 36.000 0.00 0.00 38.23 3.41
638 639 6.985188 TCTCATTGGTTATTGTAGCAACTC 57.015 37.500 0.00 0.00 38.23 3.01
639 640 7.759489 TTTCTCATTGGTTATTGTAGCAACT 57.241 32.000 0.00 0.00 38.23 3.16
640 641 8.699749 GTTTTTCTCATTGGTTATTGTAGCAAC 58.300 33.333 0.00 0.00 38.23 4.17
641 642 8.417106 TGTTTTTCTCATTGGTTATTGTAGCAA 58.583 29.630 0.00 0.00 39.55 3.91
642 643 7.946207 TGTTTTTCTCATTGGTTATTGTAGCA 58.054 30.769 0.00 0.00 0.00 3.49
643 644 8.810652 TTGTTTTTCTCATTGGTTATTGTAGC 57.189 30.769 0.00 0.00 0.00 3.58
669 670 9.909644 CAGGTTCGTTAGCTGTATATAACTATT 57.090 33.333 0.00 0.00 45.27 1.73
683 684 3.023591 GCCGTGCAGGTTCGTTAGC 62.024 63.158 5.57 0.00 43.70 3.09
712 713 9.629649 AGGAATCATATTTCATACTAGGGGTAA 57.370 33.333 0.00 0.00 33.74 2.85
731 732 1.404986 CGTGCGGGTAAGAAGGAATCA 60.405 52.381 0.00 0.00 0.00 2.57
811 816 1.347707 TGATGGTATTCCCCGATGCTC 59.652 52.381 0.00 0.00 0.00 4.26
818 823 1.692411 GCAAGGTGATGGTATTCCCC 58.308 55.000 0.00 0.00 0.00 4.81
820 825 2.435372 TGGCAAGGTGATGGTATTCC 57.565 50.000 0.00 0.00 0.00 3.01
821 826 3.068590 CCAATGGCAAGGTGATGGTATTC 59.931 47.826 0.00 0.00 0.00 1.75
822 827 3.033184 CCAATGGCAAGGTGATGGTATT 58.967 45.455 0.00 0.00 0.00 1.89
823 828 2.669781 CCAATGGCAAGGTGATGGTAT 58.330 47.619 0.00 0.00 0.00 2.73
919 936 5.682234 AGGTGATGAGTTCATATGTGTCA 57.318 39.130 1.90 4.92 36.54 3.58
926 943 6.465439 ACGTATGAAGGTGATGAGTTCATA 57.535 37.500 0.00 0.00 40.54 2.15
945 962 6.387465 CATCAAGTGAAGAAGAAGGTACGTA 58.613 40.000 0.00 0.00 0.00 3.57
946 963 4.931661 TCAAGTGAAGAAGAAGGTACGT 57.068 40.909 0.00 0.00 0.00 3.57
947 964 4.092091 GCATCAAGTGAAGAAGAAGGTACG 59.908 45.833 0.00 0.00 0.00 3.67
948 965 4.393371 GGCATCAAGTGAAGAAGAAGGTAC 59.607 45.833 0.00 0.00 0.00 3.34
1445 1474 5.062809 TGACGAAAATGGTTTCTTTGTTTGC 59.937 36.000 0.00 0.00 40.94 3.68
1446 1475 6.639671 TGACGAAAATGGTTTCTTTGTTTG 57.360 33.333 0.00 0.00 40.94 2.93
1447 1476 7.386573 ACTTTGACGAAAATGGTTTCTTTGTTT 59.613 29.630 0.00 0.00 40.94 2.83
1448 1477 6.871492 ACTTTGACGAAAATGGTTTCTTTGTT 59.129 30.769 0.00 0.00 40.94 2.83
1449 1478 6.394809 ACTTTGACGAAAATGGTTTCTTTGT 58.605 32.000 0.00 0.00 40.94 2.83
1450 1479 6.885735 ACTTTGACGAAAATGGTTTCTTTG 57.114 33.333 0.00 0.00 40.94 2.77
1451 1480 7.093992 TCAACTTTGACGAAAATGGTTTCTTT 58.906 30.769 0.00 0.00 35.64 2.52
1736 1777 2.367772 GTCTCGTTGATCTCGTCATCG 58.632 52.381 9.75 2.96 46.40 3.84
1739 1780 1.530323 TGGTCTCGTTGATCTCGTCA 58.470 50.000 9.75 4.12 34.25 4.35
1811 1852 4.415150 AGGATGGTGCCGCTGTGG 62.415 66.667 2.05 2.05 42.50 4.17
1832 1873 1.076923 GCGACAGAGGTAGGGGAGA 60.077 63.158 0.00 0.00 0.00 3.71
1882 1927 4.606457 CAGTGCACTGGAAATTAGCTAC 57.394 45.455 34.65 0.00 40.20 3.58
1898 1944 0.387750 GCAAGGCAAAGCTACAGTGC 60.388 55.000 0.00 0.00 37.55 4.40
1902 1948 2.559698 TACAGCAAGGCAAAGCTACA 57.440 45.000 0.00 0.00 39.50 2.74
1981 2036 1.246056 TGCCTTTCTGTGCATCTGGC 61.246 55.000 0.00 0.00 45.13 4.85
1984 2039 0.111061 TGGTGCCTTTCTGTGCATCT 59.889 50.000 0.00 0.00 39.36 2.90
1987 2042 2.195567 GCTGGTGCCTTTCTGTGCA 61.196 57.895 0.00 0.00 34.54 4.57
1990 2045 2.281761 CCGCTGGTGCCTTTCTGT 60.282 61.111 0.00 0.00 35.36 3.41
2341 2401 6.543831 CGAGGAAAGGTGAGGATGAATTAATT 59.456 38.462 0.00 0.00 0.00 1.40
2357 2417 4.418392 CTGCAAAATTGATCGAGGAAAGG 58.582 43.478 0.00 0.00 0.00 3.11
2363 2423 2.223433 GGCTCCTGCAAAATTGATCGAG 60.223 50.000 0.00 0.00 41.91 4.04
2366 2426 2.756760 TGAGGCTCCTGCAAAATTGATC 59.243 45.455 12.86 0.00 41.91 2.92
2440 2500 8.343168 TCAGAAACACGGTTATTTTTCCATAT 57.657 30.769 0.00 0.00 0.00 1.78
2448 2508 4.279671 TGCCAATCAGAAACACGGTTATTT 59.720 37.500 0.00 0.00 0.00 1.40
2449 2509 3.823873 TGCCAATCAGAAACACGGTTATT 59.176 39.130 0.00 0.00 0.00 1.40
2530 4022 8.708742 CAATATTTCTCTTCAGTTACACAACGA 58.291 33.333 0.00 0.00 39.78 3.85
2541 4033 6.881065 TGGAACCACTCAATATTTCTCTTCAG 59.119 38.462 0.00 0.00 0.00 3.02
2553 4045 5.447778 AGAATCATCTGGAACCACTCAAT 57.552 39.130 0.00 0.00 33.59 2.57
2569 4061 5.733620 AGTAAGTGGACGGTTTAGAATCA 57.266 39.130 0.00 0.00 0.00 2.57
2593 4085 7.656137 GTGATAAATTATCCTTCCGCTAGTTCA 59.344 37.037 10.19 0.00 34.26 3.18
2596 4088 6.270231 AGGTGATAAATTATCCTTCCGCTAGT 59.730 38.462 10.19 0.00 34.26 2.57
2597 4089 6.591834 CAGGTGATAAATTATCCTTCCGCTAG 59.408 42.308 10.19 0.00 34.26 3.42
2598 4090 6.464222 CAGGTGATAAATTATCCTTCCGCTA 58.536 40.000 10.19 0.00 34.26 4.26
2600 4092 4.083271 GCAGGTGATAAATTATCCTTCCGC 60.083 45.833 10.19 12.18 34.26 5.54
2601 4093 4.455877 GGCAGGTGATAAATTATCCTTCCG 59.544 45.833 10.19 7.86 34.26 4.30
2604 4096 7.068702 TCATTGGCAGGTGATAAATTATCCTT 58.931 34.615 10.19 0.00 34.26 3.36
2613 4105 4.790937 TGCTAATCATTGGCAGGTGATAA 58.209 39.130 3.93 3.15 42.49 1.75
2622 4114 7.927629 TCCATTTAAATCTTGCTAATCATTGGC 59.072 33.333 0.00 0.00 37.69 4.52
2663 4155 6.515272 ACTTGAAACTGTGTCATTTCTTGT 57.485 33.333 0.67 0.00 36.09 3.16
2664 4156 7.816945 AAACTTGAAACTGTGTCATTTCTTG 57.183 32.000 0.67 0.00 36.09 3.02
2666 4158 6.813152 CCAAAACTTGAAACTGTGTCATTTCT 59.187 34.615 0.67 0.00 36.09 2.52
2667 4159 6.035975 CCCAAAACTTGAAACTGTGTCATTTC 59.964 38.462 0.67 0.00 35.73 2.17
2670 4162 4.466015 ACCCAAAACTTGAAACTGTGTCAT 59.534 37.500 0.67 0.00 0.00 3.06
2671 4163 3.829601 ACCCAAAACTTGAAACTGTGTCA 59.170 39.130 0.00 0.00 0.00 3.58
2672 4164 4.173256 CACCCAAAACTTGAAACTGTGTC 58.827 43.478 0.00 0.00 0.00 3.67
2673 4165 3.576550 ACACCCAAAACTTGAAACTGTGT 59.423 39.130 0.00 0.00 0.00 3.72
2677 4169 6.538945 AACATACACCCAAAACTTGAAACT 57.461 33.333 0.00 0.00 0.00 2.66
2678 4170 7.436970 CCTAAACATACACCCAAAACTTGAAAC 59.563 37.037 0.00 0.00 0.00 2.78
2679 4171 7.124448 ACCTAAACATACACCCAAAACTTGAAA 59.876 33.333 0.00 0.00 0.00 2.69
2680 4172 6.608002 ACCTAAACATACACCCAAAACTTGAA 59.392 34.615 0.00 0.00 0.00 2.69
2682 4174 6.399639 ACCTAAACATACACCCAAAACTTG 57.600 37.500 0.00 0.00 0.00 3.16
2683 4175 5.537295 GGACCTAAACATACACCCAAAACTT 59.463 40.000 0.00 0.00 0.00 2.66
2684 4176 5.074804 GGACCTAAACATACACCCAAAACT 58.925 41.667 0.00 0.00 0.00 2.66
2685 4177 4.219070 GGGACCTAAACATACACCCAAAAC 59.781 45.833 0.00 0.00 36.27 2.43
2686 4178 4.140994 TGGGACCTAAACATACACCCAAAA 60.141 41.667 0.00 0.00 42.11 2.44
2692 4185 3.616219 TGCATGGGACCTAAACATACAC 58.384 45.455 0.00 0.00 0.00 2.90
2722 4215 9.341899 GGGCATCAATACGTTTATAATTCATTC 57.658 33.333 0.00 0.00 0.00 2.67
2723 4216 9.077885 AGGGCATCAATACGTTTATAATTCATT 57.922 29.630 0.00 0.00 0.00 2.57
2724 4217 8.514594 CAGGGCATCAATACGTTTATAATTCAT 58.485 33.333 0.00 0.00 0.00 2.57
2732 4225 2.092646 AGCCAGGGCATCAATACGTTTA 60.093 45.455 13.63 0.00 44.88 2.01
2737 4230 1.602311 CTGAGCCAGGGCATCAATAC 58.398 55.000 13.63 0.00 44.88 1.89
2806 4299 6.752351 CGCAACTGCTAGAATTTTCTCTAGTA 59.248 38.462 8.91 4.40 44.63 1.82
2807 4300 5.578727 CGCAACTGCTAGAATTTTCTCTAGT 59.421 40.000 8.91 0.00 44.63 2.57
2808 4301 5.501574 GCGCAACTGCTAGAATTTTCTCTAG 60.502 44.000 0.30 3.71 45.30 2.43
2809 4302 4.330074 GCGCAACTGCTAGAATTTTCTCTA 59.670 41.667 0.30 0.00 39.32 2.43
2810 4303 3.126000 GCGCAACTGCTAGAATTTTCTCT 59.874 43.478 0.30 0.00 39.32 3.10
2811 4304 3.420828 GCGCAACTGCTAGAATTTTCTC 58.579 45.455 0.30 0.00 39.32 2.87
2812 4305 2.159653 CGCGCAACTGCTAGAATTTTCT 60.160 45.455 8.75 0.00 39.32 2.52
2813 4306 2.169179 CGCGCAACTGCTAGAATTTTC 58.831 47.619 8.75 0.00 39.32 2.29
2814 4307 1.135689 CCGCGCAACTGCTAGAATTTT 60.136 47.619 8.75 0.00 39.32 1.82
2815 4308 0.447801 CCGCGCAACTGCTAGAATTT 59.552 50.000 8.75 0.00 39.32 1.82
2816 4309 1.369091 CCCGCGCAACTGCTAGAATT 61.369 55.000 8.75 0.00 39.32 2.17
2817 4310 1.815421 CCCGCGCAACTGCTAGAAT 60.815 57.895 8.75 0.00 39.32 2.40
2818 4311 2.434185 CCCGCGCAACTGCTAGAA 60.434 61.111 8.75 0.00 39.32 2.10
2824 4317 2.730604 CAAAAGCCCGCGCAACTG 60.731 61.111 8.75 0.00 37.52 3.16
2832 4325 0.461135 ATTGCTATGCCAAAAGCCCG 59.539 50.000 0.55 0.00 42.71 6.13
2859 4352 0.585357 TACTAGTAGCTAGCGCGCAC 59.415 55.000 35.10 22.08 42.32 5.34
2860 4353 0.585357 GTACTAGTAGCTAGCGCGCA 59.415 55.000 35.10 18.19 42.32 6.09
2861 4354 0.450808 CGTACTAGTAGCTAGCGCGC 60.451 60.000 26.66 26.66 42.32 6.86
2864 4357 0.163360 CGCCGTACTAGTAGCTAGCG 59.837 60.000 9.55 16.50 37.57 4.26
2867 4360 2.224042 TGTAGCGCCGTACTAGTAGCTA 60.224 50.000 14.42 14.42 36.30 3.32
2868 4361 1.224965 GTAGCGCCGTACTAGTAGCT 58.775 55.000 16.05 16.05 38.57 3.32
2879 4372 3.060473 GCTAAACTTTAGATGTAGCGCCG 60.060 47.826 2.29 0.00 0.00 6.46
2882 4375 6.074782 GCTACTGCTAAACTTTAGATGTAGCG 60.075 42.308 27.63 15.16 40.03 4.26
2891 4384 3.921677 AGCGTGCTACTGCTAAACTTTA 58.078 40.909 0.00 0.00 40.28 1.85
2895 4388 2.066262 TGAAGCGTGCTACTGCTAAAC 58.934 47.619 0.00 0.00 41.46 2.01
2898 4391 1.926561 CATGAAGCGTGCTACTGCTA 58.073 50.000 0.00 0.00 41.46 3.49
2899 4392 1.364626 GCATGAAGCGTGCTACTGCT 61.365 55.000 12.98 0.00 42.44 4.24
2900 4393 1.061570 GCATGAAGCGTGCTACTGC 59.938 57.895 0.00 1.23 42.44 4.40
2911 4404 6.674694 ATTAGCAGTAGAGTTTGCATGAAG 57.325 37.500 0.00 0.00 42.67 3.02
2913 4406 6.172630 TGAATTAGCAGTAGAGTTTGCATGA 58.827 36.000 0.00 0.00 42.67 3.07
2914 4407 6.426980 TGAATTAGCAGTAGAGTTTGCATG 57.573 37.500 0.00 0.00 42.67 4.06
2915 4408 8.915057 ATATGAATTAGCAGTAGAGTTTGCAT 57.085 30.769 0.00 0.00 42.67 3.96
2916 4409 9.481340 CTATATGAATTAGCAGTAGAGTTTGCA 57.519 33.333 0.00 0.00 42.67 4.08
2917 4410 8.439286 GCTATATGAATTAGCAGTAGAGTTTGC 58.561 37.037 0.00 0.00 40.57 3.68
2918 4411 9.481340 TGCTATATGAATTAGCAGTAGAGTTTG 57.519 33.333 1.45 0.00 41.33 2.93
2929 4422 5.289675 CGGTGCTACTGCTATATGAATTAGC 59.710 44.000 0.00 0.00 40.48 3.09
2934 4427 2.288825 GCCGGTGCTACTGCTATATGAA 60.289 50.000 1.90 0.00 40.48 2.57
2952 4445 2.762459 TAGCACTGGTAGGGGCCG 60.762 66.667 0.00 0.00 0.00 6.13
2958 4451 9.069082 ACTAATAACTATCTGTAGCACTGGTAG 57.931 37.037 10.01 10.01 36.97 3.18
2959 4452 8.991783 ACTAATAACTATCTGTAGCACTGGTA 57.008 34.615 0.00 0.00 0.00 3.25
2960 4453 7.899648 ACTAATAACTATCTGTAGCACTGGT 57.100 36.000 0.00 0.00 0.00 4.00
2971 4464 9.775854 TGAGCTCGTTACTACTAATAACTATCT 57.224 33.333 9.64 0.00 31.53 1.98
2980 4473 4.820716 GGATCCTGAGCTCGTTACTACTAA 59.179 45.833 9.64 0.00 0.00 2.24
2987 4480 1.734137 GCGGATCCTGAGCTCGTTA 59.266 57.895 10.75 0.00 0.00 3.18
2988 4481 2.496817 GCGGATCCTGAGCTCGTT 59.503 61.111 10.75 0.00 0.00 3.85
2989 4482 3.893763 CGCGGATCCTGAGCTCGT 61.894 66.667 10.75 0.00 0.00 4.18
2991 4484 2.556459 TAGCGCGGATCCTGAGCTC 61.556 63.158 27.79 6.82 39.14 4.09
2992 4485 2.519541 TAGCGCGGATCCTGAGCT 60.520 61.111 27.35 27.35 41.45 4.09
2993 4486 1.516365 TAGTAGCGCGGATCCTGAGC 61.516 60.000 19.15 19.15 0.00 4.26
2994 4487 0.238817 GTAGTAGCGCGGATCCTGAG 59.761 60.000 8.83 6.58 0.00 3.35
2995 4488 0.179026 AGTAGTAGCGCGGATCCTGA 60.179 55.000 8.83 0.00 0.00 3.86
3001 4494 1.600957 GACATGTAGTAGTAGCGCGGA 59.399 52.381 8.83 0.00 0.00 5.54
3005 4498 6.017357 TGGAATACAGACATGTAGTAGTAGCG 60.017 42.308 13.92 0.00 44.90 4.26
3028 4521 7.867445 ACGCTACAAAACAATAAAGAAATGG 57.133 32.000 0.00 0.00 0.00 3.16
3063 4556 9.713713 TGCTACTGTATCAAAACTTGTATAACA 57.286 29.630 0.00 0.00 0.00 2.41
3179 4726 8.647256 TGACTATGATCATGATGAGTATGACT 57.353 34.615 18.72 0.00 37.38 3.41
3190 4737 8.917088 TGAGTTGTTAGATGACTATGATCATGA 58.083 33.333 18.72 0.00 39.48 3.07
3192 4739 9.926158 GATGAGTTGTTAGATGACTATGATCAT 57.074 33.333 13.81 13.81 42.15 2.45
3193 4740 8.917088 TGATGAGTTGTTAGATGACTATGATCA 58.083 33.333 0.00 0.00 0.00 2.92
3194 4741 9.926158 ATGATGAGTTGTTAGATGACTATGATC 57.074 33.333 0.00 0.00 0.00 2.92
3222 4769 8.319146 TGATTATGATGATGAGTGATGTGCTAT 58.681 33.333 0.00 0.00 0.00 2.97
3244 4791 8.772250 TGAAGAGGAGGAGTTGTTATTATGATT 58.228 33.333 0.00 0.00 0.00 2.57
3261 4808 7.295322 TGGTTATGAGTATGATGAAGAGGAG 57.705 40.000 0.00 0.00 0.00 3.69
3264 4814 7.984050 AGTGTTGGTTATGAGTATGATGAAGAG 59.016 37.037 0.00 0.00 0.00 2.85
3267 4817 8.758829 ACTAGTGTTGGTTATGAGTATGATGAA 58.241 33.333 0.00 0.00 0.00 2.57
3327 4877 1.146152 AGGGTAGCAGGTCCTAGCTAG 59.854 57.143 14.20 14.20 43.39 3.42
3328 4878 1.145325 GAGGGTAGCAGGTCCTAGCTA 59.855 57.143 15.17 15.17 42.05 3.32
3329 4879 0.105913 GAGGGTAGCAGGTCCTAGCT 60.106 60.000 16.76 16.76 44.55 3.32
3330 4880 0.105913 AGAGGGTAGCAGGTCCTAGC 60.106 60.000 0.00 0.00 35.60 3.42
3379 4929 5.403558 TCTCCATAATGTAGAGTCAGGGA 57.596 43.478 0.00 0.00 0.00 4.20
3410 4960 3.681594 GCCCACGAATTGAAGACAGGATA 60.682 47.826 0.00 0.00 0.00 2.59
3413 4963 0.804989 GCCCACGAATTGAAGACAGG 59.195 55.000 0.00 0.00 0.00 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.