Multiple sequence alignment - TraesCS1D01G440500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G440500 chr1D 100.000 3036 0 0 1 3036 486013095 486016130 0.000000e+00 5607.0
1 TraesCS1D01G440500 chr1A 89.259 1471 77 32 795 2228 583604166 583605592 0.000000e+00 1766.0
2 TraesCS1D01G440500 chr1A 92.740 730 32 10 1 714 583602895 583603619 0.000000e+00 1035.0
3 TraesCS1D01G440500 chr1A 87.500 64 4 3 753 812 583603701 583603764 1.510000e-08 71.3
4 TraesCS1D01G440500 chr1A 79.048 105 18 4 2933 3035 139508181 139508079 5.430000e-08 69.4
5 TraesCS1D01G440500 chr1B 91.752 1176 49 20 1 1144 676744867 676746026 0.000000e+00 1591.0
6 TraesCS1D01G440500 chr1B 85.976 1312 87 35 1144 2375 676746291 676747585 0.000000e+00 1314.0
7 TraesCS1D01G440500 chr3B 86.778 537 45 15 1530 2057 644434293 644433774 2.630000e-160 575.0
8 TraesCS1D01G440500 chr3B 86.957 529 44 14 1530 2049 18542348 18542860 3.400000e-159 571.0
9 TraesCS1D01G440500 chr3B 85.280 428 58 5 2491 2916 640078358 640077934 1.290000e-118 436.0
10 TraesCS1D01G440500 chr3B 87.107 318 35 2 1504 1821 228209344 228209033 3.720000e-94 355.0
11 TraesCS1D01G440500 chr3B 89.412 170 12 2 995 1158 228209876 228209707 3.070000e-50 209.0
12 TraesCS1D01G440500 chr3B 88.235 170 14 3 1882 2048 228208938 228208772 6.640000e-47 198.0
13 TraesCS1D01G440500 chr3B 93.548 93 6 0 995 1087 228386185 228386093 4.080000e-29 139.0
14 TraesCS1D01G440500 chr3B 81.679 131 14 5 822 946 228386384 228386258 1.930000e-17 100.0
15 TraesCS1D01G440500 chr3B 80.189 106 17 4 2932 3035 651951814 651951917 3.250000e-10 76.8
16 TraesCS1D01G440500 chr3A 86.803 538 42 15 1535 2062 714029003 714028485 9.440000e-160 573.0
17 TraesCS1D01G440500 chr3A 85.178 533 61 12 1295 1821 171137730 171138250 5.760000e-147 531.0
18 TraesCS1D01G440500 chr3A 84.615 429 61 5 2491 2916 623063445 623063019 3.620000e-114 422.0
19 TraesCS1D01G440500 chr3A 87.500 320 33 3 1504 1822 171173804 171174117 2.220000e-96 363.0
20 TraesCS1D01G440500 chr3A 95.062 162 7 1 995 1156 171137512 171137672 1.400000e-63 254.0
21 TraesCS1D01G440500 chr3A 90.533 169 10 2 995 1157 171173301 171173469 5.100000e-53 219.0
22 TraesCS1D01G440500 chr3A 89.157 166 11 5 1877 2039 171174206 171174367 1.850000e-47 200.0
23 TraesCS1D01G440500 chr3A 96.078 102 4 0 2933 3034 728788278 728788379 1.870000e-37 167.0
24 TraesCS1D01G440500 chr2A 86.372 543 45 16 1530 2062 617004447 617004970 1.580000e-157 566.0
25 TraesCS1D01G440500 chr2A 85.204 196 22 3 1874 2062 647179088 647179283 8.590000e-46 195.0
26 TraesCS1D01G440500 chr7A 85.793 542 50 14 1530 2062 71731867 71732390 1.590000e-152 549.0
27 TraesCS1D01G440500 chr6B 85.240 542 55 13 1530 2062 564720285 564720810 4.460000e-148 534.0
28 TraesCS1D01G440500 chr5D 84.515 536 64 11 1295 1820 62527957 62528483 2.090000e-141 512.0
29 TraesCS1D01G440500 chr5D 86.836 433 43 12 2490 2917 432485261 432485684 3.540000e-129 472.0
30 TraesCS1D01G440500 chr5D 84.296 433 54 11 2490 2914 549651869 549652295 7.830000e-111 411.0
31 TraesCS1D01G440500 chr5D 92.254 142 8 1 996 1134 62527723 62527864 6.640000e-47 198.0
32 TraesCS1D01G440500 chr3D 88.679 424 43 5 2491 2912 485233644 485234064 2.090000e-141 512.0
33 TraesCS1D01G440500 chr3D 82.210 534 52 14 1296 1821 157180182 157179684 1.300000e-113 420.0
34 TraesCS1D01G440500 chr3D 87.421 318 34 3 1504 1821 157102663 157102352 8.000000e-96 361.0
35 TraesCS1D01G440500 chr3D 92.593 162 11 1 995 1156 157180433 157180273 6.550000e-57 231.0
36 TraesCS1D01G440500 chr3D 94.231 104 6 0 2933 3036 37467829 37467726 3.130000e-35 159.0
37 TraesCS1D01G440500 chr7B 85.280 428 55 8 2491 2915 749695131 749694709 4.650000e-118 435.0
38 TraesCS1D01G440500 chr5B 82.202 545 51 19 1530 2062 468307298 468306788 7.780000e-116 427.0
39 TraesCS1D01G440500 chr6A 84.848 429 54 8 2489 2912 4727641 4727219 3.620000e-114 422.0
40 TraesCS1D01G440500 chr5A 84.507 426 57 8 2491 2912 31463593 31463173 2.180000e-111 412.0
41 TraesCS1D01G440500 chr7D 84.346 428 58 8 2491 2914 442279933 442280355 7.830000e-111 411.0
42 TraesCS1D01G440500 chr6D 89.041 146 13 1 997 1139 3026102 3025957 8.650000e-41 178.0
43 TraesCS1D01G440500 chr2D 94.444 108 6 0 2928 3035 80356236 80356343 1.870000e-37 167.0
44 TraesCS1D01G440500 chr2B 94.175 103 6 0 2933 3035 64812517 64812619 1.130000e-34 158.0
45 TraesCS1D01G440500 chr2B 94.175 103 6 0 2933 3035 64818369 64818471 1.130000e-34 158.0
46 TraesCS1D01G440500 chr4D 93.269 104 7 0 2933 3036 178604224 178604327 1.460000e-33 154.0
47 TraesCS1D01G440500 chr4A 92.233 103 8 0 2933 3035 196494060 196494162 2.440000e-31 147.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G440500 chr1D 486013095 486016130 3035 False 5607.000000 5607 100.000000 1 3036 1 chr1D.!!$F1 3035
1 TraesCS1D01G440500 chr1A 583602895 583605592 2697 False 957.433333 1766 89.833000 1 2228 3 chr1A.!!$F1 2227
2 TraesCS1D01G440500 chr1B 676744867 676747585 2718 False 1452.500000 1591 88.864000 1 2375 2 chr1B.!!$F1 2374
3 TraesCS1D01G440500 chr3B 644433774 644434293 519 True 575.000000 575 86.778000 1530 2057 1 chr3B.!!$R2 527
4 TraesCS1D01G440500 chr3B 18542348 18542860 512 False 571.000000 571 86.957000 1530 2049 1 chr3B.!!$F1 519
5 TraesCS1D01G440500 chr3B 228208772 228209876 1104 True 254.000000 355 88.251333 995 2048 3 chr3B.!!$R3 1053
6 TraesCS1D01G440500 chr3A 714028485 714029003 518 True 573.000000 573 86.803000 1535 2062 1 chr3A.!!$R2 527
7 TraesCS1D01G440500 chr3A 171137512 171138250 738 False 392.500000 531 90.120000 995 1821 2 chr3A.!!$F2 826
8 TraesCS1D01G440500 chr3A 171173301 171174367 1066 False 260.666667 363 89.063333 995 2039 3 chr3A.!!$F3 1044
9 TraesCS1D01G440500 chr2A 617004447 617004970 523 False 566.000000 566 86.372000 1530 2062 1 chr2A.!!$F1 532
10 TraesCS1D01G440500 chr7A 71731867 71732390 523 False 549.000000 549 85.793000 1530 2062 1 chr7A.!!$F1 532
11 TraesCS1D01G440500 chr6B 564720285 564720810 525 False 534.000000 534 85.240000 1530 2062 1 chr6B.!!$F1 532
12 TraesCS1D01G440500 chr5D 62527723 62528483 760 False 355.000000 512 88.384500 996 1820 2 chr5D.!!$F3 824
13 TraesCS1D01G440500 chr3D 157179684 157180433 749 True 325.500000 420 87.401500 995 1821 2 chr3D.!!$R3 826
14 TraesCS1D01G440500 chr5B 468306788 468307298 510 True 427.000000 427 82.202000 1530 2062 1 chr5B.!!$R1 532

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
714 732 1.019673 CCTGCTTGTATGATTGCGCT 58.98 50.0 9.73 0.0 0.0 5.92 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2468 3531 0.03254 GCTGGAAACAACAAGGGCAG 59.967 55.0 0.0 0.0 42.06 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 50 5.801531 ATGATCCATTGTTACTAGGCGTA 57.198 39.130 0.00 0.00 0.00 4.42
72 73 2.380084 TGAGAAACATACCACCGAGC 57.620 50.000 0.00 0.00 0.00 5.03
219 221 2.280592 ACTTCCGTCCCGTGTTGC 60.281 61.111 0.00 0.00 0.00 4.17
222 224 3.524648 TTCCGTCCCGTGTTGCTCC 62.525 63.158 0.00 0.00 0.00 4.70
246 253 8.112822 TCCCATTTTAACAATATGGACTCAGAA 58.887 33.333 9.21 0.00 41.05 3.02
432 448 9.995003 ATGAATTAAAAACTCAAGCAAATGGTA 57.005 25.926 0.00 0.00 0.00 3.25
653 671 2.766263 AGATCCGAACAAGCCATAGTCA 59.234 45.455 0.00 0.00 0.00 3.41
714 732 1.019673 CCTGCTTGTATGATTGCGCT 58.980 50.000 9.73 0.00 0.00 5.92
732 770 4.216731 GCGCTAACACTTTTAACTTCACC 58.783 43.478 0.00 0.00 0.00 4.02
745 783 9.182933 CTTTTAACTTCACCGAGACTATATAGC 57.817 37.037 9.78 3.19 0.00 2.97
746 784 8.461249 TTTAACTTCACCGAGACTATATAGCT 57.539 34.615 9.78 7.88 0.00 3.32
747 785 6.963083 AACTTCACCGAGACTATATAGCTT 57.037 37.500 9.78 0.00 0.00 3.74
806 869 1.408683 GGTGGCATAGCATGAGTGGAA 60.409 52.381 0.00 0.00 0.00 3.53
808 871 1.839354 TGGCATAGCATGAGTGGAAGA 59.161 47.619 0.00 0.00 0.00 2.87
810 1294 3.117776 TGGCATAGCATGAGTGGAAGAAT 60.118 43.478 0.00 0.00 0.00 2.40
953 1444 4.019681 CCTACAAGTAGGGAATCAACCACA 60.020 45.833 16.81 0.00 46.96 4.17
954 1445 3.751518 ACAAGTAGGGAATCAACCACAC 58.248 45.455 0.00 0.00 0.00 3.82
980 1471 2.917971 CTCTTGGTTGAATCGAGTCGAC 59.082 50.000 22.14 22.14 39.18 4.20
1158 1947 1.270550 CGTACTAAACCTGTCCACGGT 59.729 52.381 0.00 0.00 35.97 4.83
1159 1948 2.669391 CGTACTAAACCTGTCCACGGTC 60.669 54.545 0.00 0.00 32.46 4.79
1206 2041 3.553511 CAGATTAGTAGCTTGAACTGCCG 59.446 47.826 0.00 0.00 0.00 5.69
1226 2061 4.565564 GCCGAAACGTCTTACATTAGTGAT 59.434 41.667 0.00 0.00 0.00 3.06
1234 2069 8.221965 ACGTCTTACATTAGTGATCAGATGTA 57.778 34.615 16.61 16.61 34.76 2.29
1240 2075 7.831691 ACATTAGTGATCAGATGTAGTAGCT 57.168 36.000 14.39 0.00 31.41 3.32
1241 2076 8.243961 ACATTAGTGATCAGATGTAGTAGCTT 57.756 34.615 14.39 0.00 31.41 3.74
1445 2346 2.479901 CCACCACCAACGGTACAAAAAC 60.480 50.000 0.00 0.00 37.07 2.43
1753 2697 3.890926 GGCTACATGGAGGGCCCC 61.891 72.222 21.43 10.33 38.77 5.80
1914 2926 5.221783 TGTGATGATGATAGGTTGATGAGGG 60.222 44.000 0.00 0.00 0.00 4.30
1984 3008 1.227943 AAGCTTCTTGAGTGCGCCA 60.228 52.632 4.18 0.00 0.00 5.69
1988 3012 1.227943 TTCTTGAGTGCGCCAGCTT 60.228 52.632 4.18 0.00 45.42 3.74
2049 3079 1.079503 GACTGAAGCGCGAAGGAATT 58.920 50.000 12.10 0.00 0.00 2.17
2062 3092 1.795962 GGAATTGGCGAAACGTGCG 60.796 57.895 6.70 6.70 0.00 5.34
2063 3093 1.205568 GAATTGGCGAAACGTGCGA 59.794 52.632 14.31 0.00 0.00 5.10
2066 3104 1.503818 ATTGGCGAAACGTGCGACTT 61.504 50.000 16.48 3.44 37.73 3.01
2069 3107 1.011574 GCGAAACGTGCGACTTGTT 60.012 52.632 14.31 0.00 0.00 2.83
2071 3109 1.372656 CGAAACGTGCGACTTGTTTC 58.627 50.000 5.24 6.92 44.90 2.78
2082 3120 3.318017 CGACTTGTTTCGTCTCCAGAAT 58.682 45.455 0.00 0.00 34.16 2.40
2097 3135 4.594970 TCCAGAATTTCGGATTTGGCTAA 58.405 39.130 0.00 0.00 0.00 3.09
2103 3141 6.381133 AGAATTTCGGATTTGGCTAAATTCCT 59.619 34.615 9.60 0.00 43.01 3.36
2111 3149 6.986231 GGATTTGGCTAAATTCCTTGTAATGG 59.014 38.462 9.60 0.00 36.66 3.16
2230 3269 2.608970 AAATGGGCGATGCTAGGCGT 62.609 55.000 0.00 0.00 34.74 5.68
2231 3270 3.814615 ATGGGCGATGCTAGGCGTG 62.815 63.158 0.00 0.00 34.74 5.34
2232 3271 4.530857 GGGCGATGCTAGGCGTGT 62.531 66.667 0.00 0.00 34.74 4.49
2233 3272 2.962253 GGCGATGCTAGGCGTGTC 60.962 66.667 0.00 0.00 0.00 3.67
2241 3297 1.227263 CTAGGCGTGTCCGATTGGG 60.227 63.158 0.00 0.00 40.77 4.12
2247 3303 1.303317 GTGTCCGATTGGGCCAACT 60.303 57.895 23.59 11.06 40.01 3.16
2252 3308 0.035439 CCGATTGGGCCAACTGTAGT 60.035 55.000 23.59 3.86 0.00 2.73
2268 3325 6.472686 ACTGTAGTTGTTGATCCCTATCTC 57.527 41.667 0.00 0.00 32.93 2.75
2274 3331 5.964477 AGTTGTTGATCCCTATCTCACCTTA 59.036 40.000 0.00 0.00 32.93 2.69
2277 3334 6.143206 TGTTGATCCCTATCTCACCTTATCA 58.857 40.000 0.00 0.00 32.93 2.15
2283 3340 7.937700 TCCCTATCTCACCTTATCATCTTTT 57.062 36.000 0.00 0.00 0.00 2.27
2287 3344 7.659390 CCTATCTCACCTTATCATCTTTTCACC 59.341 40.741 0.00 0.00 0.00 4.02
2288 3345 6.373005 TCTCACCTTATCATCTTTTCACCA 57.627 37.500 0.00 0.00 0.00 4.17
2293 3350 5.643777 ACCTTATCATCTTTTCACCACTTCG 59.356 40.000 0.00 0.00 0.00 3.79
2318 3375 3.314080 CCACTACGAGTCTTCCTCTCATC 59.686 52.174 0.00 0.00 38.11 2.92
2325 3382 4.536765 GAGTCTTCCTCTCATCCTTCTCT 58.463 47.826 0.00 0.00 37.22 3.10
2326 3383 4.536765 AGTCTTCCTCTCATCCTTCTCTC 58.463 47.826 0.00 0.00 0.00 3.20
2327 3384 3.315191 GTCTTCCTCTCATCCTTCTCTCG 59.685 52.174 0.00 0.00 0.00 4.04
2328 3385 1.686355 TCCTCTCATCCTTCTCTCGC 58.314 55.000 0.00 0.00 0.00 5.03
2394 3457 4.802051 CATCCCCCACACCCGCTG 62.802 72.222 0.00 0.00 0.00 5.18
2397 3460 4.802051 CCCCCACACCCGCTGATG 62.802 72.222 0.00 0.00 0.00 3.07
2398 3461 3.716195 CCCCACACCCGCTGATGA 61.716 66.667 0.00 0.00 0.00 2.92
2399 3462 2.124983 CCCACACCCGCTGATGAG 60.125 66.667 0.00 0.00 0.00 2.90
2400 3463 2.821366 CCACACCCGCTGATGAGC 60.821 66.667 0.00 0.00 42.37 4.26
2401 3464 2.267006 CACACCCGCTGATGAGCT 59.733 61.111 1.81 0.00 43.77 4.09
2402 3465 1.376424 CACACCCGCTGATGAGCTT 60.376 57.895 1.81 0.00 43.77 3.74
2403 3466 0.108186 CACACCCGCTGATGAGCTTA 60.108 55.000 1.81 0.00 43.77 3.09
2404 3467 0.833287 ACACCCGCTGATGAGCTTAT 59.167 50.000 1.81 0.00 43.77 1.73
2405 3468 2.039418 ACACCCGCTGATGAGCTTATA 58.961 47.619 1.81 0.00 43.77 0.98
2406 3469 2.036475 ACACCCGCTGATGAGCTTATAG 59.964 50.000 1.81 0.00 43.77 1.31
2407 3470 1.001406 ACCCGCTGATGAGCTTATAGC 59.999 52.381 1.81 0.97 43.77 2.97
2417 3480 2.378211 GCTTATAGCTCCCTCCCCC 58.622 63.158 0.00 0.00 38.45 5.40
2441 3504 3.015145 CCCCACACCCCCTCGAAT 61.015 66.667 0.00 0.00 0.00 3.34
2442 3505 2.590092 CCCACACCCCCTCGAATC 59.410 66.667 0.00 0.00 0.00 2.52
2443 3506 2.297895 CCCACACCCCCTCGAATCA 61.298 63.158 0.00 0.00 0.00 2.57
2444 3507 1.635817 CCCACACCCCCTCGAATCAT 61.636 60.000 0.00 0.00 0.00 2.45
2445 3508 0.255890 CCACACCCCCTCGAATCATT 59.744 55.000 0.00 0.00 0.00 2.57
2446 3509 1.340991 CCACACCCCCTCGAATCATTT 60.341 52.381 0.00 0.00 0.00 2.32
2447 3510 2.017049 CACACCCCCTCGAATCATTTC 58.983 52.381 0.00 0.00 0.00 2.17
2448 3511 1.064685 ACACCCCCTCGAATCATTTCC 60.065 52.381 0.00 0.00 0.00 3.13
2449 3512 1.212935 CACCCCCTCGAATCATTTCCT 59.787 52.381 0.00 0.00 0.00 3.36
2450 3513 1.490910 ACCCCCTCGAATCATTTCCTC 59.509 52.381 0.00 0.00 0.00 3.71
2451 3514 1.202818 CCCCCTCGAATCATTTCCTCC 60.203 57.143 0.00 0.00 0.00 4.30
2452 3515 1.202818 CCCCTCGAATCATTTCCTCCC 60.203 57.143 0.00 0.00 0.00 4.30
2453 3516 1.771255 CCCTCGAATCATTTCCTCCCT 59.229 52.381 0.00 0.00 0.00 4.20
2454 3517 2.173569 CCCTCGAATCATTTCCTCCCTT 59.826 50.000 0.00 0.00 0.00 3.95
2455 3518 3.471680 CCTCGAATCATTTCCTCCCTTC 58.528 50.000 0.00 0.00 0.00 3.46
2456 3519 3.126831 CTCGAATCATTTCCTCCCTTCG 58.873 50.000 0.00 0.00 37.43 3.79
2457 3520 1.599542 CGAATCATTTCCTCCCTTCGC 59.400 52.381 0.00 0.00 30.65 4.70
2458 3521 2.643551 GAATCATTTCCTCCCTTCGCA 58.356 47.619 0.00 0.00 0.00 5.10
2459 3522 3.217626 GAATCATTTCCTCCCTTCGCAT 58.782 45.455 0.00 0.00 0.00 4.73
2460 3523 2.332063 TCATTTCCTCCCTTCGCATC 57.668 50.000 0.00 0.00 0.00 3.91
2461 3524 1.839994 TCATTTCCTCCCTTCGCATCT 59.160 47.619 0.00 0.00 0.00 2.90
2462 3525 2.158900 TCATTTCCTCCCTTCGCATCTC 60.159 50.000 0.00 0.00 0.00 2.75
2463 3526 1.275666 TTTCCTCCCTTCGCATCTCA 58.724 50.000 0.00 0.00 0.00 3.27
2464 3527 1.500474 TTCCTCCCTTCGCATCTCAT 58.500 50.000 0.00 0.00 0.00 2.90
2465 3528 1.043816 TCCTCCCTTCGCATCTCATC 58.956 55.000 0.00 0.00 0.00 2.92
2466 3529 0.755079 CCTCCCTTCGCATCTCATCA 59.245 55.000 0.00 0.00 0.00 3.07
2467 3530 1.539929 CCTCCCTTCGCATCTCATCAC 60.540 57.143 0.00 0.00 0.00 3.06
2468 3531 0.465705 TCCCTTCGCATCTCATCACC 59.534 55.000 0.00 0.00 0.00 4.02
2469 3532 0.467384 CCCTTCGCATCTCATCACCT 59.533 55.000 0.00 0.00 0.00 4.00
2470 3533 1.579698 CCTTCGCATCTCATCACCTG 58.420 55.000 0.00 0.00 0.00 4.00
2471 3534 0.935898 CTTCGCATCTCATCACCTGC 59.064 55.000 0.00 0.00 0.00 4.85
2472 3535 0.462581 TTCGCATCTCATCACCTGCC 60.463 55.000 0.00 0.00 0.00 4.85
2473 3536 1.890979 CGCATCTCATCACCTGCCC 60.891 63.158 0.00 0.00 0.00 5.36
2474 3537 1.530771 GCATCTCATCACCTGCCCT 59.469 57.895 0.00 0.00 0.00 5.19
2475 3538 0.106819 GCATCTCATCACCTGCCCTT 60.107 55.000 0.00 0.00 0.00 3.95
2476 3539 1.676746 CATCTCATCACCTGCCCTTG 58.323 55.000 0.00 0.00 0.00 3.61
2477 3540 1.064906 CATCTCATCACCTGCCCTTGT 60.065 52.381 0.00 0.00 0.00 3.16
2478 3541 1.067295 TCTCATCACCTGCCCTTGTT 58.933 50.000 0.00 0.00 0.00 2.83
2479 3542 1.171308 CTCATCACCTGCCCTTGTTG 58.829 55.000 0.00 0.00 0.00 3.33
2480 3543 0.478072 TCATCACCTGCCCTTGTTGT 59.522 50.000 0.00 0.00 0.00 3.32
2481 3544 1.133513 TCATCACCTGCCCTTGTTGTT 60.134 47.619 0.00 0.00 0.00 2.83
2482 3545 1.688197 CATCACCTGCCCTTGTTGTTT 59.312 47.619 0.00 0.00 0.00 2.83
2483 3546 1.398692 TCACCTGCCCTTGTTGTTTC 58.601 50.000 0.00 0.00 0.00 2.78
2484 3547 0.389025 CACCTGCCCTTGTTGTTTCC 59.611 55.000 0.00 0.00 0.00 3.13
2485 3548 0.032615 ACCTGCCCTTGTTGTTTCCA 60.033 50.000 0.00 0.00 0.00 3.53
2486 3549 0.675633 CCTGCCCTTGTTGTTTCCAG 59.324 55.000 0.00 0.00 0.00 3.86
2487 3550 0.032540 CTGCCCTTGTTGTTTCCAGC 59.967 55.000 0.00 0.00 0.00 4.85
2488 3551 1.007387 GCCCTTGTTGTTTCCAGCG 60.007 57.895 0.00 0.00 0.00 5.18
2489 3552 1.007387 CCCTTGTTGTTTCCAGCGC 60.007 57.895 0.00 0.00 0.00 5.92
2490 3553 1.370414 CCTTGTTGTTTCCAGCGCG 60.370 57.895 0.00 0.00 0.00 6.86
2491 3554 1.370414 CTTGTTGTTTCCAGCGCGG 60.370 57.895 8.83 11.37 0.00 6.46
2492 3555 3.477224 TTGTTGTTTCCAGCGCGGC 62.477 57.895 8.83 0.00 33.14 6.53
2493 3556 3.959975 GTTGTTTCCAGCGCGGCA 61.960 61.111 8.83 0.17 33.14 5.69
2494 3557 3.212682 TTGTTTCCAGCGCGGCAA 61.213 55.556 8.83 6.37 33.14 4.52
2495 3558 2.775856 TTGTTTCCAGCGCGGCAAA 61.776 52.632 8.83 2.80 33.14 3.68
2496 3559 2.026879 GTTTCCAGCGCGGCAAAA 59.973 55.556 8.83 7.63 33.14 2.44
2497 3560 1.372872 GTTTCCAGCGCGGCAAAAT 60.373 52.632 8.83 0.00 33.14 1.82
2498 3561 0.943835 GTTTCCAGCGCGGCAAAATT 60.944 50.000 8.83 0.00 33.14 1.82
2499 3562 0.249657 TTTCCAGCGCGGCAAAATTT 60.250 45.000 8.83 0.00 33.14 1.82
2500 3563 0.249657 TTCCAGCGCGGCAAAATTTT 60.250 45.000 8.83 0.00 33.14 1.82
2501 3564 0.943359 TCCAGCGCGGCAAAATTTTG 60.943 50.000 23.74 23.74 41.03 2.44
2502 3565 1.220817 CCAGCGCGGCAAAATTTTGT 61.221 50.000 27.13 8.00 40.24 2.83
2503 3566 0.111178 CAGCGCGGCAAAATTTTGTG 60.111 50.000 27.13 21.32 40.24 3.33
2504 3567 0.529555 AGCGCGGCAAAATTTTGTGT 60.530 45.000 27.13 7.60 40.24 3.72
2505 3568 0.303191 GCGCGGCAAAATTTTGTGTT 59.697 45.000 27.13 0.00 40.24 3.32
2506 3569 1.267782 GCGCGGCAAAATTTTGTGTTT 60.268 42.857 27.13 0.00 40.24 2.83
2507 3570 2.789436 GCGCGGCAAAATTTTGTGTTTT 60.789 40.909 27.13 0.00 40.24 2.43
2508 3571 2.775149 CGCGGCAAAATTTTGTGTTTTG 59.225 40.909 27.13 14.19 45.01 2.44
2509 3572 3.484229 CGCGGCAAAATTTTGTGTTTTGA 60.484 39.130 27.13 0.00 45.02 2.69
2510 3573 3.783418 GCGGCAAAATTTTGTGTTTTGAC 59.217 39.130 27.13 11.33 46.27 3.18
2511 3574 4.338596 CGGCAAAATTTTGTGTTTTGACC 58.661 39.130 27.13 17.48 46.77 4.02
2512 3575 4.667262 GGCAAAATTTTGTGTTTTGACCC 58.333 39.130 27.13 15.12 44.81 4.46
2513 3576 4.397730 GGCAAAATTTTGTGTTTTGACCCT 59.602 37.500 27.13 0.00 44.81 4.34
2514 3577 5.105957 GGCAAAATTTTGTGTTTTGACCCTT 60.106 36.000 27.13 0.00 44.81 3.95
2515 3578 6.385843 GCAAAATTTTGTGTTTTGACCCTTT 58.614 32.000 27.13 0.00 45.02 3.11
2516 3579 6.865726 GCAAAATTTTGTGTTTTGACCCTTTT 59.134 30.769 27.13 0.00 45.02 2.27
2517 3580 7.383572 GCAAAATTTTGTGTTTTGACCCTTTTT 59.616 29.630 27.13 0.00 45.02 1.94
2518 3581 8.910666 CAAAATTTTGTGTTTTGACCCTTTTTC 58.089 29.630 20.57 0.00 45.02 2.29
2519 3582 7.994425 AATTTTGTGTTTTGACCCTTTTTCT 57.006 28.000 0.00 0.00 0.00 2.52
2520 3583 6.793492 TTTTGTGTTTTGACCCTTTTTCTG 57.207 33.333 0.00 0.00 0.00 3.02
2521 3584 5.730296 TTGTGTTTTGACCCTTTTTCTGA 57.270 34.783 0.00 0.00 0.00 3.27
2522 3585 5.730296 TGTGTTTTGACCCTTTTTCTGAA 57.270 34.783 0.00 0.00 0.00 3.02
2523 3586 6.102897 TGTGTTTTGACCCTTTTTCTGAAA 57.897 33.333 0.00 0.00 0.00 2.69
2524 3587 6.162777 TGTGTTTTGACCCTTTTTCTGAAAG 58.837 36.000 2.75 0.00 0.00 2.62
2525 3588 6.163476 GTGTTTTGACCCTTTTTCTGAAAGT 58.837 36.000 2.75 0.00 33.76 2.66
2526 3589 6.649141 GTGTTTTGACCCTTTTTCTGAAAGTT 59.351 34.615 2.75 0.00 33.76 2.66
2527 3590 7.815549 GTGTTTTGACCCTTTTTCTGAAAGTTA 59.184 33.333 2.75 0.00 33.76 2.24
2528 3591 8.368668 TGTTTTGACCCTTTTTCTGAAAGTTAA 58.631 29.630 2.75 0.00 33.76 2.01
2529 3592 9.378551 GTTTTGACCCTTTTTCTGAAAGTTAAT 57.621 29.630 2.75 0.00 33.76 1.40
2530 3593 9.594478 TTTTGACCCTTTTTCTGAAAGTTAATC 57.406 29.630 2.75 1.84 33.76 1.75
2531 3594 7.889873 TGACCCTTTTTCTGAAAGTTAATCA 57.110 32.000 2.75 4.17 33.76 2.57
2532 3595 8.299990 TGACCCTTTTTCTGAAAGTTAATCAA 57.700 30.769 2.75 0.00 33.76 2.57
2533 3596 8.413229 TGACCCTTTTTCTGAAAGTTAATCAAG 58.587 33.333 2.75 2.82 33.76 3.02
2534 3597 8.533569 ACCCTTTTTCTGAAAGTTAATCAAGA 57.466 30.769 2.75 0.00 33.76 3.02
2535 3598 9.147732 ACCCTTTTTCTGAAAGTTAATCAAGAT 57.852 29.630 2.75 0.00 33.76 2.40
2536 3599 9.631452 CCCTTTTTCTGAAAGTTAATCAAGATC 57.369 33.333 2.75 0.00 33.76 2.75
2541 3604 8.553459 TTCTGAAAGTTAATCAAGATCTGACC 57.447 34.615 0.00 0.00 33.43 4.02
2542 3605 7.106239 TCTGAAAGTTAATCAAGATCTGACCC 58.894 38.462 0.00 0.00 33.43 4.46
2543 3606 6.778821 TGAAAGTTAATCAAGATCTGACCCA 58.221 36.000 0.00 0.00 36.69 4.51
2544 3607 7.230747 TGAAAGTTAATCAAGATCTGACCCAA 58.769 34.615 0.00 0.00 36.69 4.12
2545 3608 7.391554 TGAAAGTTAATCAAGATCTGACCCAAG 59.608 37.037 0.00 0.00 36.69 3.61
2546 3609 6.380079 AGTTAATCAAGATCTGACCCAAGT 57.620 37.500 0.00 0.00 36.69 3.16
2547 3610 6.784031 AGTTAATCAAGATCTGACCCAAGTT 58.216 36.000 0.00 0.00 36.69 2.66
2548 3611 7.234355 AGTTAATCAAGATCTGACCCAAGTTT 58.766 34.615 0.00 0.00 36.69 2.66
2549 3612 5.972107 AATCAAGATCTGACCCAAGTTTG 57.028 39.130 0.00 0.00 36.69 2.93
2550 3613 3.149196 TCAAGATCTGACCCAAGTTTGC 58.851 45.455 0.00 0.00 0.00 3.68
2551 3614 2.886523 CAAGATCTGACCCAAGTTTGCA 59.113 45.455 0.00 0.00 0.00 4.08
2552 3615 3.228188 AGATCTGACCCAAGTTTGCAA 57.772 42.857 0.00 0.00 0.00 4.08
2553 3616 3.565307 AGATCTGACCCAAGTTTGCAAA 58.435 40.909 8.05 8.05 0.00 3.68
2554 3617 3.960102 AGATCTGACCCAAGTTTGCAAAA 59.040 39.130 14.67 0.00 0.00 2.44
2555 3618 4.405358 AGATCTGACCCAAGTTTGCAAAAA 59.595 37.500 14.67 0.00 0.00 1.94
2556 3619 4.751767 TCTGACCCAAGTTTGCAAAAAT 57.248 36.364 14.67 2.58 0.00 1.82
2557 3620 5.096443 TCTGACCCAAGTTTGCAAAAATT 57.904 34.783 14.67 9.21 0.00 1.82
2558 3621 5.495640 TCTGACCCAAGTTTGCAAAAATTT 58.504 33.333 14.67 6.25 0.00 1.82
2559 3622 5.584251 TCTGACCCAAGTTTGCAAAAATTTC 59.416 36.000 14.67 7.38 0.00 2.17
2560 3623 4.331168 TGACCCAAGTTTGCAAAAATTTCG 59.669 37.500 14.67 6.67 0.00 3.46
2561 3624 3.625313 ACCCAAGTTTGCAAAAATTTCGG 59.375 39.130 14.67 12.75 0.00 4.30
2562 3625 3.873952 CCCAAGTTTGCAAAAATTTCGGA 59.126 39.130 14.67 0.00 0.00 4.55
2563 3626 4.333926 CCCAAGTTTGCAAAAATTTCGGAA 59.666 37.500 14.67 0.00 0.00 4.30
2564 3627 5.008514 CCCAAGTTTGCAAAAATTTCGGAAT 59.991 36.000 14.67 0.00 0.00 3.01
2565 3628 6.135400 CCAAGTTTGCAAAAATTTCGGAATC 58.865 36.000 14.67 0.00 0.00 2.52
2566 3629 6.018016 CCAAGTTTGCAAAAATTTCGGAATCT 60.018 34.615 14.67 0.00 0.00 2.40
2567 3630 6.529463 AGTTTGCAAAAATTTCGGAATCTG 57.471 33.333 14.67 0.00 0.00 2.90
2568 3631 6.279882 AGTTTGCAAAAATTTCGGAATCTGA 58.720 32.000 14.67 0.00 0.00 3.27
2569 3632 6.200854 AGTTTGCAAAAATTTCGGAATCTGAC 59.799 34.615 14.67 0.00 0.00 3.51
2570 3633 4.555262 TGCAAAAATTTCGGAATCTGACC 58.445 39.130 0.00 0.00 0.00 4.02
2571 3634 3.926527 GCAAAAATTTCGGAATCTGACCC 59.073 43.478 0.00 0.00 0.00 4.46
2572 3635 4.321974 GCAAAAATTTCGGAATCTGACCCT 60.322 41.667 0.00 0.00 0.00 4.34
2573 3636 5.783111 CAAAAATTTCGGAATCTGACCCTT 58.217 37.500 0.00 0.00 0.00 3.95
2574 3637 6.223120 CAAAAATTTCGGAATCTGACCCTTT 58.777 36.000 0.00 0.00 0.00 3.11
2575 3638 6.419484 AAAATTTCGGAATCTGACCCTTTT 57.581 33.333 0.00 0.00 0.00 2.27
2576 3639 5.391312 AATTTCGGAATCTGACCCTTTTG 57.609 39.130 0.00 0.00 0.00 2.44
2577 3640 1.821216 TCGGAATCTGACCCTTTTGC 58.179 50.000 0.00 0.00 0.00 3.68
2578 3641 1.351017 TCGGAATCTGACCCTTTTGCT 59.649 47.619 0.00 0.00 0.00 3.91
2579 3642 2.569853 TCGGAATCTGACCCTTTTGCTA 59.430 45.455 0.00 0.00 0.00 3.49
2580 3643 2.678336 CGGAATCTGACCCTTTTGCTAC 59.322 50.000 0.00 0.00 0.00 3.58
2581 3644 3.017442 GGAATCTGACCCTTTTGCTACC 58.983 50.000 0.00 0.00 0.00 3.18
2582 3645 2.403252 ATCTGACCCTTTTGCTACCG 57.597 50.000 0.00 0.00 0.00 4.02
2583 3646 0.321298 TCTGACCCTTTTGCTACCGC 60.321 55.000 0.00 0.00 0.00 5.68
2584 3647 1.302993 TGACCCTTTTGCTACCGCC 60.303 57.895 0.00 0.00 34.43 6.13
2585 3648 1.302993 GACCCTTTTGCTACCGCCA 60.303 57.895 0.00 0.00 34.43 5.69
2586 3649 1.303317 ACCCTTTTGCTACCGCCAG 60.303 57.895 0.00 0.00 34.43 4.85
2587 3650 2.046285 CCCTTTTGCTACCGCCAGG 61.046 63.158 0.00 0.00 45.13 4.45
2588 3651 2.046285 CCTTTTGCTACCGCCAGGG 61.046 63.158 0.00 0.00 43.47 4.45
2589 3652 2.034999 TTTTGCTACCGCCAGGGG 59.965 61.111 0.00 0.00 43.47 4.79
2590 3653 2.764637 CTTTTGCTACCGCCAGGGGT 62.765 60.000 11.48 11.48 43.47 4.95
2591 3654 3.561120 TTTGCTACCGCCAGGGGTG 62.561 63.158 16.08 7.60 41.41 4.61
2594 3657 3.797353 CTACCGCCAGGGGTGCAT 61.797 66.667 16.08 0.00 41.41 3.96
2595 3658 4.108299 TACCGCCAGGGGTGCATG 62.108 66.667 16.08 0.00 41.41 4.06
2598 3661 4.720902 CGCCAGGGGTGCATGACA 62.721 66.667 0.00 0.00 0.00 3.58
2599 3662 2.753043 GCCAGGGGTGCATGACAG 60.753 66.667 0.00 0.00 0.00 3.51
2600 3663 2.759114 CCAGGGGTGCATGACAGT 59.241 61.111 0.00 0.00 0.00 3.55
2601 3664 1.990424 CCAGGGGTGCATGACAGTA 59.010 57.895 0.00 0.00 0.00 2.74
2602 3665 0.107508 CCAGGGGTGCATGACAGTAG 60.108 60.000 0.00 0.00 0.00 2.57
2603 3666 0.107508 CAGGGGTGCATGACAGTAGG 60.108 60.000 0.00 0.00 0.00 3.18
2604 3667 1.224592 GGGGTGCATGACAGTAGGG 59.775 63.158 0.00 0.00 0.00 3.53
2605 3668 1.562672 GGGGTGCATGACAGTAGGGT 61.563 60.000 0.00 0.00 0.00 4.34
2606 3669 0.392998 GGGTGCATGACAGTAGGGTG 60.393 60.000 0.00 0.00 0.00 4.61
2607 3670 0.324943 GGTGCATGACAGTAGGGTGT 59.675 55.000 0.00 0.00 0.00 4.16
2608 3671 1.553248 GGTGCATGACAGTAGGGTGTA 59.447 52.381 0.00 0.00 0.00 2.90
2609 3672 2.027561 GGTGCATGACAGTAGGGTGTAA 60.028 50.000 0.00 0.00 0.00 2.41
2610 3673 3.370527 GGTGCATGACAGTAGGGTGTAAT 60.371 47.826 0.00 0.00 0.00 1.89
2611 3674 4.141801 GGTGCATGACAGTAGGGTGTAATA 60.142 45.833 0.00 0.00 0.00 0.98
2612 3675 5.050490 GTGCATGACAGTAGGGTGTAATAG 58.950 45.833 0.00 0.00 0.00 1.73
2613 3676 4.058817 GCATGACAGTAGGGTGTAATAGC 58.941 47.826 0.00 0.00 0.00 2.97
2621 3684 2.808523 GGGTGTAATAGCCTACCGTC 57.191 55.000 0.00 0.00 43.77 4.79
2622 3685 2.034124 GGGTGTAATAGCCTACCGTCA 58.966 52.381 0.00 0.00 43.77 4.35
2623 3686 2.035576 GGGTGTAATAGCCTACCGTCAG 59.964 54.545 0.00 0.00 43.77 3.51
2624 3687 2.035576 GGTGTAATAGCCTACCGTCAGG 59.964 54.545 0.00 0.00 45.13 3.86
2625 3688 2.035576 GTGTAATAGCCTACCGTCAGGG 59.964 54.545 2.07 0.00 43.47 4.45
2626 3689 2.091720 TGTAATAGCCTACCGTCAGGGA 60.092 50.000 0.00 0.00 43.47 4.20
2627 3690 1.411041 AATAGCCTACCGTCAGGGAC 58.589 55.000 0.00 0.00 43.47 4.46
2628 3691 0.469518 ATAGCCTACCGTCAGGGACC 60.470 60.000 0.00 0.00 43.47 4.46
2629 3692 1.578215 TAGCCTACCGTCAGGGACCT 61.578 60.000 0.00 0.00 43.47 3.85
2630 3693 1.988406 GCCTACCGTCAGGGACCTT 60.988 63.158 0.00 0.00 43.47 3.50
2631 3694 0.685458 GCCTACCGTCAGGGACCTTA 60.685 60.000 0.00 0.00 43.47 2.69
2632 3695 1.856629 CCTACCGTCAGGGACCTTAA 58.143 55.000 0.00 0.00 43.47 1.85
2633 3696 1.479730 CCTACCGTCAGGGACCTTAAC 59.520 57.143 0.00 0.00 43.47 2.01
2634 3697 1.133790 CTACCGTCAGGGACCTTAACG 59.866 57.143 13.40 13.40 43.47 3.18
2635 3698 1.217244 CCGTCAGGGACCTTAACGG 59.783 63.158 21.04 21.04 45.79 4.44
2648 3711 4.582869 ACCTTAACGGTAGAAAACATCCC 58.417 43.478 0.00 0.00 46.73 3.85
2649 3712 4.287845 ACCTTAACGGTAGAAAACATCCCT 59.712 41.667 0.00 0.00 46.73 4.20
2650 3713 5.484998 ACCTTAACGGTAGAAAACATCCCTA 59.515 40.000 0.00 0.00 46.73 3.53
2651 3714 5.814188 CCTTAACGGTAGAAAACATCCCTAC 59.186 44.000 0.00 0.00 33.79 3.18
2652 3715 3.900966 ACGGTAGAAAACATCCCTACC 57.099 47.619 0.00 0.00 45.47 3.18
2654 3717 2.558378 GGTAGAAAACATCCCTACCGC 58.442 52.381 0.00 0.00 41.83 5.68
2655 3718 2.558378 GTAGAAAACATCCCTACCGCC 58.442 52.381 0.00 0.00 0.00 6.13
2656 3719 0.988832 AGAAAACATCCCTACCGCCA 59.011 50.000 0.00 0.00 0.00 5.69
2657 3720 1.353022 AGAAAACATCCCTACCGCCAA 59.647 47.619 0.00 0.00 0.00 4.52
2658 3721 2.164338 GAAAACATCCCTACCGCCAAA 58.836 47.619 0.00 0.00 0.00 3.28
2659 3722 1.541379 AAACATCCCTACCGCCAAAC 58.459 50.000 0.00 0.00 0.00 2.93
2660 3723 0.402504 AACATCCCTACCGCCAAACA 59.597 50.000 0.00 0.00 0.00 2.83
2661 3724 0.035439 ACATCCCTACCGCCAAACAG 60.035 55.000 0.00 0.00 0.00 3.16
2662 3725 0.748005 CATCCCTACCGCCAAACAGG 60.748 60.000 0.00 0.00 41.84 4.00
2671 3734 2.033448 CCAAACAGGCTGGCGGTA 59.967 61.111 20.34 0.00 0.00 4.02
2672 3735 2.040544 CCAAACAGGCTGGCGGTAG 61.041 63.158 20.34 3.91 0.00 3.18
2673 3736 2.359975 AAACAGGCTGGCGGTAGC 60.360 61.111 20.34 0.00 42.94 3.58
2683 3746 4.196965 GCGGTAGCCCTGTACAAC 57.803 61.111 0.00 0.00 37.42 3.32
2684 3747 1.449070 GCGGTAGCCCTGTACAACC 60.449 63.158 3.90 3.90 37.42 3.77
2685 3748 1.219935 CGGTAGCCCTGTACAACCC 59.780 63.158 7.87 0.00 0.00 4.11
2686 3749 1.262640 CGGTAGCCCTGTACAACCCT 61.263 60.000 7.87 1.96 0.00 4.34
2687 3750 1.870064 GGTAGCCCTGTACAACCCTA 58.130 55.000 0.00 0.00 0.00 3.53
2688 3751 1.483827 GGTAGCCCTGTACAACCCTAC 59.516 57.143 13.82 13.82 0.00 3.18
2689 3752 1.483827 GTAGCCCTGTACAACCCTACC 59.516 57.143 12.19 0.91 0.00 3.18
2690 3753 0.178885 AGCCCTGTACAACCCTACCA 60.179 55.000 0.00 0.00 0.00 3.25
2691 3754 0.035725 GCCCTGTACAACCCTACCAC 60.036 60.000 0.00 0.00 0.00 4.16
2692 3755 1.354101 CCCTGTACAACCCTACCACA 58.646 55.000 0.00 0.00 0.00 4.17
2693 3756 1.700739 CCCTGTACAACCCTACCACAA 59.299 52.381 0.00 0.00 0.00 3.33
2694 3757 2.290071 CCCTGTACAACCCTACCACAAG 60.290 54.545 0.00 0.00 0.00 3.16
2695 3758 2.290071 CCTGTACAACCCTACCACAAGG 60.290 54.545 0.00 0.00 42.21 3.61
2706 3769 4.954970 CACAAGGTGCCTGGCGGT 62.955 66.667 14.98 4.14 0.00 5.68
2707 3770 3.246112 ACAAGGTGCCTGGCGGTA 61.246 61.111 14.98 0.00 0.00 4.02
2708 3771 2.436646 CAAGGTGCCTGGCGGTAG 60.437 66.667 14.98 0.00 0.00 3.18
2709 3772 3.717294 AAGGTGCCTGGCGGTAGG 61.717 66.667 14.98 0.00 40.95 3.18
2736 3799 3.878086 CACGCACTGTGTTTCATACTT 57.122 42.857 9.86 0.00 43.88 2.24
2737 3800 4.983215 CACGCACTGTGTTTCATACTTA 57.017 40.909 9.86 0.00 43.88 2.24
2738 3801 4.946255 CACGCACTGTGTTTCATACTTAG 58.054 43.478 9.86 0.00 43.88 2.18
2739 3802 4.684242 CACGCACTGTGTTTCATACTTAGA 59.316 41.667 9.86 0.00 43.88 2.10
2740 3803 5.176774 CACGCACTGTGTTTCATACTTAGAA 59.823 40.000 9.86 0.00 43.88 2.10
2741 3804 5.405571 ACGCACTGTGTTTCATACTTAGAAG 59.594 40.000 9.86 0.00 0.00 2.85
2742 3805 5.633601 CGCACTGTGTTTCATACTTAGAAGA 59.366 40.000 9.86 0.00 0.00 2.87
2743 3806 6.145534 CGCACTGTGTTTCATACTTAGAAGAA 59.854 38.462 9.86 0.00 0.00 2.52
2744 3807 7.307160 CGCACTGTGTTTCATACTTAGAAGAAA 60.307 37.037 9.86 0.00 0.00 2.52
2745 3808 8.507249 GCACTGTGTTTCATACTTAGAAGAAAT 58.493 33.333 9.86 0.00 33.18 2.17
2749 3812 9.677567 TGTGTTTCATACTTAGAAGAAATTTGC 57.322 29.630 0.00 0.00 33.18 3.68
2750 3813 9.677567 GTGTTTCATACTTAGAAGAAATTTGCA 57.322 29.630 0.00 0.00 33.18 4.08
2751 3814 9.897744 TGTTTCATACTTAGAAGAAATTTGCAG 57.102 29.630 0.00 0.00 33.18 4.41
2752 3815 9.899226 GTTTCATACTTAGAAGAAATTTGCAGT 57.101 29.630 0.00 0.00 33.18 4.40
2755 3818 9.383519 TCATACTTAGAAGAAATTTGCAGTAGG 57.616 33.333 0.00 0.00 0.00 3.18
2756 3819 8.616076 CATACTTAGAAGAAATTTGCAGTAGGG 58.384 37.037 0.00 0.00 0.00 3.53
2757 3820 5.416013 ACTTAGAAGAAATTTGCAGTAGGGC 59.584 40.000 0.00 0.00 0.00 5.19
2758 3821 3.766545 AGAAGAAATTTGCAGTAGGGCA 58.233 40.909 0.00 0.00 43.19 5.36
2759 3822 4.347607 AGAAGAAATTTGCAGTAGGGCAT 58.652 39.130 0.00 0.00 44.48 4.40
2760 3823 4.159135 AGAAGAAATTTGCAGTAGGGCATG 59.841 41.667 0.00 0.00 44.48 4.06
2761 3824 2.167075 AGAAATTTGCAGTAGGGCATGC 59.833 45.455 9.90 9.90 44.48 4.06
2765 3828 3.200522 GCAGTAGGGCATGCAACC 58.799 61.111 21.36 12.66 42.11 3.77
2771 3834 2.828549 GGGCATGCAACCCTACCG 60.829 66.667 21.36 0.00 44.68 4.02
2772 3835 3.518068 GGCATGCAACCCTACCGC 61.518 66.667 21.36 0.00 0.00 5.68
2773 3836 3.518068 GCATGCAACCCTACCGCC 61.518 66.667 14.21 0.00 0.00 6.13
2774 3837 2.045438 CATGCAACCCTACCGCCA 60.045 61.111 0.00 0.00 0.00 5.69
2775 3838 2.114670 CATGCAACCCTACCGCCAG 61.115 63.158 0.00 0.00 0.00 4.85
2776 3839 3.344137 ATGCAACCCTACCGCCAGG 62.344 63.158 0.00 0.00 45.13 4.45
2782 3845 3.971894 CCTACCGCCAGGGATCTT 58.028 61.111 0.00 0.00 43.47 2.40
2783 3846 1.447643 CCTACCGCCAGGGATCTTG 59.552 63.158 0.00 0.00 43.47 3.02
2784 3847 1.447643 CTACCGCCAGGGATCTTGG 59.552 63.158 11.14 11.14 43.47 3.61
2785 3848 2.666596 CTACCGCCAGGGATCTTGGC 62.667 65.000 23.58 23.58 44.69 4.52
2788 3851 4.115199 GCCAGGGATCTTGGCGGT 62.115 66.667 20.70 0.00 39.06 5.68
2789 3852 2.742116 GCCAGGGATCTTGGCGGTA 61.742 63.158 20.70 0.00 39.06 4.02
2790 3853 1.447643 CCAGGGATCTTGGCGGTAG 59.552 63.158 4.26 0.00 0.00 3.18
2791 3854 1.447643 CAGGGATCTTGGCGGTAGG 59.552 63.158 0.00 0.00 0.00 3.18
2792 3855 2.111251 GGGATCTTGGCGGTAGGC 59.889 66.667 0.00 0.00 44.11 3.93
2793 3856 2.444256 GGGATCTTGGCGGTAGGCT 61.444 63.158 0.00 0.00 44.18 4.58
2794 3857 1.227674 GGATCTTGGCGGTAGGCTG 60.228 63.158 0.00 0.00 44.18 4.85
2795 3858 1.522569 GATCTTGGCGGTAGGCTGT 59.477 57.895 0.00 0.00 44.18 4.40
2796 3859 0.107654 GATCTTGGCGGTAGGCTGTT 60.108 55.000 0.00 0.00 44.18 3.16
2797 3860 1.138266 GATCTTGGCGGTAGGCTGTTA 59.862 52.381 0.00 0.00 44.18 2.41
2798 3861 1.200519 TCTTGGCGGTAGGCTGTTAT 58.799 50.000 0.00 0.00 44.18 1.89
2799 3862 2.390696 TCTTGGCGGTAGGCTGTTATA 58.609 47.619 0.00 0.00 44.18 0.98
2800 3863 2.767394 TCTTGGCGGTAGGCTGTTATAA 59.233 45.455 0.00 0.00 44.18 0.98
2801 3864 2.607631 TGGCGGTAGGCTGTTATAAC 57.392 50.000 8.75 8.75 44.18 1.89
2802 3865 1.139455 TGGCGGTAGGCTGTTATAACC 59.861 52.381 13.01 0.00 44.18 2.85
2803 3866 1.415289 GGCGGTAGGCTGTTATAACCT 59.585 52.381 13.01 5.82 42.94 3.50
2804 3867 2.629617 GGCGGTAGGCTGTTATAACCTA 59.370 50.000 13.01 4.86 42.94 3.08
2808 3871 4.926140 GTAGGCTGTTATAACCTACCGT 57.074 45.455 13.01 3.51 46.82 4.83
2809 3872 4.864633 GTAGGCTGTTATAACCTACCGTC 58.135 47.826 13.01 6.72 46.82 4.79
2810 3873 3.368248 AGGCTGTTATAACCTACCGTCA 58.632 45.455 13.01 0.00 29.98 4.35
2811 3874 3.965347 AGGCTGTTATAACCTACCGTCAT 59.035 43.478 13.01 0.00 29.98 3.06
2812 3875 4.056050 GGCTGTTATAACCTACCGTCATG 58.944 47.826 13.01 0.00 0.00 3.07
2813 3876 4.056050 GCTGTTATAACCTACCGTCATGG 58.944 47.826 13.01 0.00 46.41 3.66
2814 3877 4.202182 GCTGTTATAACCTACCGTCATGGA 60.202 45.833 13.01 0.00 42.00 3.41
2815 3878 5.266733 TGTTATAACCTACCGTCATGGAC 57.733 43.478 13.01 0.00 42.00 4.02
2816 3879 4.099881 TGTTATAACCTACCGTCATGGACC 59.900 45.833 13.01 0.00 42.00 4.46
2817 3880 1.488390 TAACCTACCGTCATGGACCC 58.512 55.000 0.00 0.00 42.00 4.46
2818 3881 0.252558 AACCTACCGTCATGGACCCT 60.253 55.000 0.00 0.00 42.00 4.34
2819 3882 0.976073 ACCTACCGTCATGGACCCTG 60.976 60.000 0.00 0.00 42.00 4.45
2820 3883 1.686325 CCTACCGTCATGGACCCTGG 61.686 65.000 0.00 0.00 42.00 4.45
2821 3884 2.311688 CTACCGTCATGGACCCTGGC 62.312 65.000 0.00 0.00 42.00 4.85
2822 3885 4.838152 CCGTCATGGACCCTGGCG 62.838 72.222 15.89 15.89 42.00 5.69
2823 3886 4.838152 CGTCATGGACCCTGGCGG 62.838 72.222 15.15 0.00 38.04 6.13
2832 3895 3.644861 ACCCTGGCGGTAAGAAAAG 57.355 52.632 0.00 0.00 45.97 2.27
2833 3896 0.037734 ACCCTGGCGGTAAGAAAAGG 59.962 55.000 0.00 0.00 45.97 3.11
2834 3897 0.679960 CCCTGGCGGTAAGAAAAGGG 60.680 60.000 0.00 0.00 38.56 3.95
2835 3898 0.037734 CCTGGCGGTAAGAAAAGGGT 59.962 55.000 0.00 0.00 0.00 4.34
2836 3899 1.450025 CTGGCGGTAAGAAAAGGGTC 58.550 55.000 0.00 0.00 0.00 4.46
2837 3900 0.766131 TGGCGGTAAGAAAAGGGTCA 59.234 50.000 0.00 0.00 0.00 4.02
2838 3901 1.271163 TGGCGGTAAGAAAAGGGTCAG 60.271 52.381 0.00 0.00 0.00 3.51
2839 3902 1.002773 GGCGGTAAGAAAAGGGTCAGA 59.997 52.381 0.00 0.00 0.00 3.27
2840 3903 2.355818 GGCGGTAAGAAAAGGGTCAGAT 60.356 50.000 0.00 0.00 0.00 2.90
2841 3904 2.937149 GCGGTAAGAAAAGGGTCAGATC 59.063 50.000 0.00 0.00 0.00 2.75
2842 3905 3.532542 CGGTAAGAAAAGGGTCAGATCC 58.467 50.000 0.00 0.00 0.00 3.36
2854 3917 5.907866 GGGTCAGATCCCGAAATTTTAAA 57.092 39.130 0.00 0.00 37.93 1.52
2855 3918 6.275494 GGGTCAGATCCCGAAATTTTAAAA 57.725 37.500 2.51 2.51 37.93 1.52
2856 3919 6.330278 GGGTCAGATCCCGAAATTTTAAAAG 58.670 40.000 6.79 0.00 37.93 2.27
2857 3920 6.330278 GGTCAGATCCCGAAATTTTAAAAGG 58.670 40.000 6.79 2.09 0.00 3.11
2858 3921 5.805486 GTCAGATCCCGAAATTTTAAAAGGC 59.195 40.000 6.79 0.00 0.00 4.35
2859 3922 5.478679 TCAGATCCCGAAATTTTAAAAGGCA 59.521 36.000 6.79 0.00 0.00 4.75
2860 3923 5.807011 CAGATCCCGAAATTTTAAAAGGCAG 59.193 40.000 6.79 0.00 0.00 4.85
2861 3924 4.529109 TCCCGAAATTTTAAAAGGCAGG 57.471 40.909 6.79 7.39 0.00 4.85
2862 3925 3.259625 TCCCGAAATTTTAAAAGGCAGGG 59.740 43.478 19.89 19.89 36.57 4.45
2863 3926 3.007506 CCCGAAATTTTAAAAGGCAGGGT 59.992 43.478 18.62 0.00 0.00 4.34
2864 3927 4.242475 CCGAAATTTTAAAAGGCAGGGTC 58.758 43.478 6.79 0.00 0.00 4.46
2865 3928 4.262249 CCGAAATTTTAAAAGGCAGGGTCA 60.262 41.667 6.79 0.00 0.00 4.02
2866 3929 5.293560 CGAAATTTTAAAAGGCAGGGTCAA 58.706 37.500 6.79 0.00 0.00 3.18
2867 3930 5.755861 CGAAATTTTAAAAGGCAGGGTCAAA 59.244 36.000 6.79 0.00 0.00 2.69
2868 3931 6.426633 CGAAATTTTAAAAGGCAGGGTCAAAT 59.573 34.615 6.79 0.00 0.00 2.32
2869 3932 7.360017 CGAAATTTTAAAAGGCAGGGTCAAATC 60.360 37.037 6.79 0.00 0.00 2.17
2870 3933 6.686484 ATTTTAAAAGGCAGGGTCAAATCT 57.314 33.333 6.79 0.00 0.00 2.40
2871 3934 5.722021 TTTAAAAGGCAGGGTCAAATCTC 57.278 39.130 0.00 0.00 0.00 2.75
2872 3935 1.826385 AAAGGCAGGGTCAAATCTCG 58.174 50.000 0.00 0.00 0.00 4.04
2873 3936 0.984230 AAGGCAGGGTCAAATCTCGA 59.016 50.000 0.00 0.00 0.00 4.04
2874 3937 1.207791 AGGCAGGGTCAAATCTCGAT 58.792 50.000 0.00 0.00 0.00 3.59
2875 3938 1.139853 AGGCAGGGTCAAATCTCGATC 59.860 52.381 0.00 0.00 0.00 3.69
2876 3939 1.134401 GGCAGGGTCAAATCTCGATCA 60.134 52.381 0.00 0.00 0.00 2.92
2877 3940 2.632377 GCAGGGTCAAATCTCGATCAA 58.368 47.619 0.00 0.00 0.00 2.57
2878 3941 2.611292 GCAGGGTCAAATCTCGATCAAG 59.389 50.000 0.00 0.00 0.00 3.02
2879 3942 3.866651 CAGGGTCAAATCTCGATCAAGT 58.133 45.455 0.00 0.00 0.00 3.16
2880 3943 4.256920 CAGGGTCAAATCTCGATCAAGTT 58.743 43.478 0.00 0.00 0.00 2.66
2881 3944 4.697352 CAGGGTCAAATCTCGATCAAGTTT 59.303 41.667 0.00 0.00 0.00 2.66
2882 3945 5.182001 CAGGGTCAAATCTCGATCAAGTTTT 59.818 40.000 0.00 0.00 0.00 2.43
2883 3946 5.182001 AGGGTCAAATCTCGATCAAGTTTTG 59.818 40.000 9.90 9.90 37.32 2.44
2884 3947 5.048713 GGGTCAAATCTCGATCAAGTTTTGT 60.049 40.000 14.08 0.00 37.29 2.83
2885 3948 6.148811 GGGTCAAATCTCGATCAAGTTTTGTA 59.851 38.462 14.08 2.79 37.29 2.41
2886 3949 7.308348 GGGTCAAATCTCGATCAAGTTTTGTAA 60.308 37.037 14.08 0.00 37.29 2.41
2887 3950 8.073768 GGTCAAATCTCGATCAAGTTTTGTAAA 58.926 33.333 14.08 0.00 37.29 2.01
2888 3951 9.445786 GTCAAATCTCGATCAAGTTTTGTAAAA 57.554 29.630 14.08 0.00 37.29 1.52
2891 3954 9.463443 AAATCTCGATCAAGTTTTGTAAAAAGG 57.537 29.630 0.00 0.00 0.00 3.11
2892 3955 7.562454 TCTCGATCAAGTTTTGTAAAAAGGT 57.438 32.000 0.00 0.00 0.00 3.50
2893 3956 7.636326 TCTCGATCAAGTTTTGTAAAAAGGTC 58.364 34.615 0.00 0.00 0.00 3.85
2894 3957 7.281324 TCTCGATCAAGTTTTGTAAAAAGGTCA 59.719 33.333 0.00 0.00 0.00 4.02
2895 3958 7.763356 TCGATCAAGTTTTGTAAAAAGGTCAA 58.237 30.769 0.00 0.00 0.00 3.18
2896 3959 8.244802 TCGATCAAGTTTTGTAAAAAGGTCAAA 58.755 29.630 0.00 0.00 0.00 2.69
2897 3960 8.865001 CGATCAAGTTTTGTAAAAAGGTCAAAA 58.135 29.630 0.00 0.00 38.27 2.44
2909 3972 9.631639 GTAAAAAGGTCAAAACATGAAAATTCG 57.368 29.630 0.00 0.00 40.50 3.34
2910 3973 5.905480 AAGGTCAAAACATGAAAATTCGC 57.095 34.783 0.00 0.00 40.50 4.70
2911 3974 4.306600 AGGTCAAAACATGAAAATTCGCC 58.693 39.130 0.00 0.00 40.50 5.54
2912 3975 4.039124 AGGTCAAAACATGAAAATTCGCCT 59.961 37.500 0.00 0.00 40.50 5.52
2913 3976 4.385748 GGTCAAAACATGAAAATTCGCCTC 59.614 41.667 0.00 0.00 40.50 4.70
2914 3977 4.385748 GTCAAAACATGAAAATTCGCCTCC 59.614 41.667 0.00 0.00 40.50 4.30
2915 3978 3.592898 AAACATGAAAATTCGCCTCCC 57.407 42.857 0.00 0.00 0.00 4.30
2916 3979 2.214376 ACATGAAAATTCGCCTCCCA 57.786 45.000 0.00 0.00 0.00 4.37
2917 3980 2.094675 ACATGAAAATTCGCCTCCCAG 58.905 47.619 0.00 0.00 0.00 4.45
2918 3981 1.106285 ATGAAAATTCGCCTCCCAGC 58.894 50.000 0.00 0.00 0.00 4.85
2937 4000 3.834799 CCGCCCCTCGTCCACTAC 61.835 72.222 0.00 0.00 36.19 2.73
2938 4001 2.754658 CGCCCCTCGTCCACTACT 60.755 66.667 0.00 0.00 0.00 2.57
2939 4002 1.452651 CGCCCCTCGTCCACTACTA 60.453 63.158 0.00 0.00 0.00 1.82
2940 4003 1.445716 CGCCCCTCGTCCACTACTAG 61.446 65.000 0.00 0.00 0.00 2.57
2941 4004 1.108132 GCCCCTCGTCCACTACTAGG 61.108 65.000 0.00 0.00 40.11 3.02
2944 4007 2.431954 CCTCGTCCACTACTAGGGAA 57.568 55.000 0.00 0.00 37.39 3.97
2945 4008 2.731572 CCTCGTCCACTACTAGGGAAA 58.268 52.381 0.00 0.00 37.39 3.13
2946 4009 3.094572 CCTCGTCCACTACTAGGGAAAA 58.905 50.000 0.00 0.00 37.39 2.29
2947 4010 3.130693 CCTCGTCCACTACTAGGGAAAAG 59.869 52.174 0.00 0.00 37.39 2.27
2948 4011 3.094572 TCGTCCACTACTAGGGAAAAGG 58.905 50.000 0.00 0.00 34.34 3.11
2949 4012 2.418334 CGTCCACTACTAGGGAAAAGGC 60.418 54.545 0.00 0.00 34.34 4.35
2950 4013 2.838813 GTCCACTACTAGGGAAAAGGCT 59.161 50.000 0.00 0.00 34.34 4.58
2951 4014 4.028825 GTCCACTACTAGGGAAAAGGCTA 58.971 47.826 0.00 0.00 34.34 3.93
2952 4015 4.028825 TCCACTACTAGGGAAAAGGCTAC 58.971 47.826 0.00 0.00 0.00 3.58
2953 4016 4.031611 CCACTACTAGGGAAAAGGCTACT 58.968 47.826 0.00 0.00 0.00 2.57
2954 4017 4.141914 CCACTACTAGGGAAAAGGCTACTG 60.142 50.000 0.00 0.00 0.00 2.74
2955 4018 4.031611 ACTACTAGGGAAAAGGCTACTGG 58.968 47.826 0.00 0.00 0.00 4.00
2956 4019 2.917205 ACTAGGGAAAAGGCTACTGGT 58.083 47.619 0.00 0.00 0.00 4.00
2957 4020 4.070681 ACTAGGGAAAAGGCTACTGGTA 57.929 45.455 0.00 0.00 0.00 3.25
2958 4021 4.031611 ACTAGGGAAAAGGCTACTGGTAG 58.968 47.826 3.62 3.62 36.29 3.18
2970 4033 4.373348 CTACTGGTAGCGCTAGAAAACT 57.627 45.455 19.48 0.95 0.00 2.66
2971 4034 2.960819 ACTGGTAGCGCTAGAAAACTG 58.039 47.619 19.48 7.88 0.00 3.16
2972 4035 2.271800 CTGGTAGCGCTAGAAAACTGG 58.728 52.381 19.48 1.80 0.00 4.00
2973 4036 1.007580 GGTAGCGCTAGAAAACTGGC 58.992 55.000 19.48 2.06 0.00 4.85
2974 4037 1.405661 GGTAGCGCTAGAAAACTGGCT 60.406 52.381 19.48 0.00 34.69 4.75
2975 4038 2.159142 GGTAGCGCTAGAAAACTGGCTA 60.159 50.000 19.48 0.00 32.29 3.93
2976 4039 2.301577 AGCGCTAGAAAACTGGCTAG 57.698 50.000 8.99 0.00 37.69 3.42
2977 4040 1.550976 AGCGCTAGAAAACTGGCTAGT 59.449 47.619 8.99 0.00 37.13 2.57
2978 4041 2.758979 AGCGCTAGAAAACTGGCTAGTA 59.241 45.455 8.99 0.00 37.13 1.82
2979 4042 3.117046 GCGCTAGAAAACTGGCTAGTAG 58.883 50.000 1.97 0.00 37.13 2.57
2980 4043 3.429135 GCGCTAGAAAACTGGCTAGTAGT 60.429 47.826 1.97 0.00 37.13 2.73
2981 4044 4.201990 GCGCTAGAAAACTGGCTAGTAGTA 60.202 45.833 1.97 0.00 37.13 1.82
2982 4045 5.512473 CGCTAGAAAACTGGCTAGTAGTAG 58.488 45.833 1.97 3.71 37.13 2.57
2989 4052 3.429925 GCTAGTAGTAGCGCGGGT 58.570 61.111 13.69 0.00 42.41 5.28
2990 4053 1.732308 GCTAGTAGTAGCGCGGGTT 59.268 57.895 13.69 0.00 42.41 4.11
2991 4054 0.317687 GCTAGTAGTAGCGCGGGTTC 60.318 60.000 13.69 0.00 42.41 3.62
2992 4055 0.310232 CTAGTAGTAGCGCGGGTTCC 59.690 60.000 8.83 0.00 0.00 3.62
2993 4056 1.103398 TAGTAGTAGCGCGGGTTCCC 61.103 60.000 8.83 0.00 0.00 3.97
3002 4065 3.520862 CGGGTTCCCGCGCTACTA 61.521 66.667 17.41 0.00 42.86 1.82
3003 4066 2.105729 GGGTTCCCGCGCTACTAC 59.894 66.667 5.56 0.00 0.00 2.73
3004 4067 2.421399 GGGTTCCCGCGCTACTACT 61.421 63.158 5.56 0.00 0.00 2.57
3005 4068 1.103398 GGGTTCCCGCGCTACTACTA 61.103 60.000 5.56 0.00 0.00 1.82
3006 4069 0.957362 GGTTCCCGCGCTACTACTAT 59.043 55.000 5.56 0.00 0.00 2.12
3007 4070 1.068679 GGTTCCCGCGCTACTACTATC 60.069 57.143 5.56 0.00 0.00 2.08
3008 4071 0.870393 TTCCCGCGCTACTACTATCG 59.130 55.000 5.56 0.00 0.00 2.92
3009 4072 1.154263 CCCGCGCTACTACTATCGC 60.154 63.158 5.56 0.00 43.62 4.58
3016 4079 4.511457 CGCTACTACTATCGCGCTATAA 57.489 45.455 5.56 0.00 39.11 0.98
3017 4080 4.262233 CGCTACTACTATCGCGCTATAAC 58.738 47.826 5.56 0.00 39.11 1.89
3018 4081 4.032672 CGCTACTACTATCGCGCTATAACT 59.967 45.833 5.56 0.00 39.11 2.24
3019 4082 5.230936 CGCTACTACTATCGCGCTATAACTA 59.769 44.000 5.56 0.00 39.11 2.24
3020 4083 6.237675 CGCTACTACTATCGCGCTATAACTAA 60.238 42.308 5.56 0.00 39.11 2.24
3021 4084 7.459486 GCTACTACTATCGCGCTATAACTAAA 58.541 38.462 5.56 0.00 0.00 1.85
3022 4085 7.959651 GCTACTACTATCGCGCTATAACTAAAA 59.040 37.037 5.56 0.00 0.00 1.52
3023 4086 9.475505 CTACTACTATCGCGCTATAACTAAAAG 57.524 37.037 5.56 0.00 0.00 2.27
3024 4087 7.869800 ACTACTATCGCGCTATAACTAAAAGT 58.130 34.615 5.56 1.03 0.00 2.66
3025 4088 8.348507 ACTACTATCGCGCTATAACTAAAAGTT 58.651 33.333 5.56 0.00 41.97 2.66
3026 4089 9.817365 CTACTATCGCGCTATAACTAAAAGTTA 57.183 33.333 5.56 2.23 43.95 2.24
3027 4090 8.725212 ACTATCGCGCTATAACTAAAAGTTAG 57.275 34.615 5.56 0.00 43.17 2.34
3028 4091 8.348507 ACTATCGCGCTATAACTAAAAGTTAGT 58.651 33.333 5.56 0.00 43.17 2.24
3029 4092 9.817365 CTATCGCGCTATAACTAAAAGTTAGTA 57.183 33.333 5.56 0.00 43.17 1.82
3030 4093 8.725212 ATCGCGCTATAACTAAAAGTTAGTAG 57.275 34.615 5.56 8.07 43.17 2.57
3031 4094 7.697691 TCGCGCTATAACTAAAAGTTAGTAGT 58.302 34.615 5.56 0.00 43.17 2.73
3032 4095 8.826710 TCGCGCTATAACTAAAAGTTAGTAGTA 58.173 33.333 5.56 0.00 43.17 1.82
3033 4096 9.100895 CGCGCTATAACTAAAAGTTAGTAGTAG 57.899 37.037 5.56 7.77 43.17 2.57
3034 4097 8.900762 GCGCTATAACTAAAAGTTAGTAGTAGC 58.099 37.037 20.94 20.94 43.17 3.58
3035 4098 9.941664 CGCTATAACTAAAAGTTAGTAGTAGCA 57.058 33.333 25.18 5.81 43.17 3.49
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
49 50 4.697514 CTCGGTGGTATGTTTCTCATCAT 58.302 43.478 0.00 0.00 37.91 2.45
72 73 2.792674 TGTCGTCAACTTTCTAAGCACG 59.207 45.455 0.00 0.00 33.24 5.34
170 172 7.500992 TGTGGCATTTCTACCATTTTGTAAAA 58.499 30.769 0.00 0.00 38.46 1.52
175 177 5.540911 AGTTGTGGCATTTCTACCATTTTG 58.459 37.500 0.00 0.00 38.46 2.44
219 221 7.775093 TCTGAGTCCATATTGTTAAAATGGGAG 59.225 37.037 1.02 0.00 40.53 4.30
294 303 9.723601 ATATTTGTTTGCCAGATTTGTACATTT 57.276 25.926 0.00 0.00 0.00 2.32
298 307 9.801873 ATGTATATTTGTTTGCCAGATTTGTAC 57.198 29.630 0.00 0.00 0.00 2.90
537 555 1.244019 AACGGGCAACATCTTGAGCC 61.244 55.000 0.00 0.00 39.85 4.70
653 671 4.951094 AGTCGCTAGTAGAGTTTGGAATCT 59.049 41.667 0.00 0.00 0.00 2.40
714 732 6.576185 AGTCTCGGTGAAGTTAAAAGTGTTA 58.424 36.000 0.00 0.00 0.00 2.41
763 801 3.066203 CGTCACCCTTTGCAGTTTAGTTT 59.934 43.478 0.00 0.00 0.00 2.66
764 802 2.616842 CGTCACCCTTTGCAGTTTAGTT 59.383 45.455 0.00 0.00 0.00 2.24
765 803 2.218603 CGTCACCCTTTGCAGTTTAGT 58.781 47.619 0.00 0.00 0.00 2.24
766 804 1.535462 CCGTCACCCTTTGCAGTTTAG 59.465 52.381 0.00 0.00 0.00 1.85
767 805 1.600023 CCGTCACCCTTTGCAGTTTA 58.400 50.000 0.00 0.00 0.00 2.01
768 806 1.106944 CCCGTCACCCTTTGCAGTTT 61.107 55.000 0.00 0.00 0.00 2.66
769 807 1.528309 CCCGTCACCCTTTGCAGTT 60.528 57.895 0.00 0.00 0.00 3.16
806 869 0.175302 CTCTGCAGCGGTGAGATTCT 59.825 55.000 20.69 0.00 0.00 2.40
808 871 0.108424 GTCTCTGCAGCGGTGAGATT 60.108 55.000 20.69 0.00 38.80 2.40
810 1294 2.965783 GTCTCTGCAGCGGTGAGA 59.034 61.111 20.69 16.20 34.86 3.27
860 1344 6.312426 CACTGCATGGAAAAAGACTAGTAGAG 59.688 42.308 3.59 0.00 0.00 2.43
861 1345 6.014584 TCACTGCATGGAAAAAGACTAGTAGA 60.015 38.462 3.59 0.00 0.00 2.59
980 1471 2.475666 GCTAACAGCAGCCTTCCAG 58.524 57.895 0.00 0.00 41.89 3.86
1140 1926 1.541147 CGACCGTGGACAGGTTTAGTA 59.459 52.381 0.00 0.00 43.01 1.82
1206 2041 8.535592 CATCTGATCACTAATGTAAGACGTTTC 58.464 37.037 0.00 0.00 0.00 2.78
1241 2076 9.847224 ACTTCCAAGATGAAGAACTTTTTACTA 57.153 29.630 7.71 0.00 43.60 1.82
1445 2346 3.125146 CGATTGTATGTGTTGAGGTGTGG 59.875 47.826 0.00 0.00 0.00 4.17
1914 2926 1.973812 GCCTTCTCCACCTTGGTGC 60.974 63.158 13.93 0.00 39.03 5.01
2049 3079 2.586635 AAGTCGCACGTTTCGCCA 60.587 55.556 2.38 0.00 0.00 5.69
2062 3092 5.612709 CGAAATTCTGGAGACGAAACAAGTC 60.613 44.000 0.00 0.00 38.81 3.01
2063 3093 4.211374 CGAAATTCTGGAGACGAAACAAGT 59.789 41.667 0.00 0.00 0.00 3.16
2066 3104 3.064207 CCGAAATTCTGGAGACGAAACA 58.936 45.455 0.00 0.00 0.00 2.83
2069 3107 3.887621 ATCCGAAATTCTGGAGACGAA 57.112 42.857 11.02 0.00 37.76 3.85
2071 3109 3.063997 CCAAATCCGAAATTCTGGAGACG 59.936 47.826 11.02 0.00 37.76 4.18
2082 3120 5.245075 ACAAGGAATTTAGCCAAATCCGAAA 59.755 36.000 0.00 0.00 33.09 3.46
2140 3178 9.658799 CTGATAATATAGTCGATGGGTTGAAAT 57.341 33.333 0.00 0.00 0.00 2.17
2147 3185 8.833231 AAAACACTGATAATATAGTCGATGGG 57.167 34.615 0.00 0.00 0.00 4.00
2177 3215 8.760980 ACTAGAAGTCAGATATCAGTAAAGCT 57.239 34.615 5.32 0.00 0.00 3.74
2178 3216 9.810545 AAACTAGAAGTCAGATATCAGTAAAGC 57.189 33.333 5.32 0.00 0.00 3.51
2192 3231 8.303876 GCCCATTTGAAATTAAACTAGAAGTCA 58.696 33.333 0.00 0.00 0.00 3.41
2193 3232 7.484959 CGCCCATTTGAAATTAAACTAGAAGTC 59.515 37.037 0.00 0.00 0.00 3.01
2207 3246 2.023673 CCTAGCATCGCCCATTTGAAA 58.976 47.619 0.00 0.00 0.00 2.69
2231 3270 0.035820 TACAGTTGGCCCAATCGGAC 60.036 55.000 0.00 0.00 42.05 4.79
2232 3271 0.251916 CTACAGTTGGCCCAATCGGA 59.748 55.000 0.00 0.00 0.00 4.55
2233 3272 0.035439 ACTACAGTTGGCCCAATCGG 60.035 55.000 0.00 0.00 0.00 4.18
2241 3297 7.621811 GATAGGGATCAACAACTACAGTTGGC 61.622 46.154 22.46 8.94 43.88 4.52
2247 3303 5.128827 GGTGAGATAGGGATCAACAACTACA 59.871 44.000 0.00 0.00 33.21 2.74
2252 3308 6.615316 TGATAAGGTGAGATAGGGATCAACAA 59.385 38.462 0.00 0.00 35.52 2.83
2265 3322 6.013379 AGTGGTGAAAAGATGATAAGGTGAGA 60.013 38.462 0.00 0.00 0.00 3.27
2268 3325 6.402550 CGAAGTGGTGAAAAGATGATAAGGTG 60.403 42.308 0.00 0.00 0.00 4.00
2293 3350 1.744522 GAGGAAGACTCGTAGTGGGAC 59.255 57.143 0.00 0.00 36.29 4.46
2318 3375 2.277628 GAGCGACGCGAGAGAAGG 60.278 66.667 15.93 0.00 0.00 3.46
2349 3412 4.436998 GACGGCGAGGTGTGGGAG 62.437 72.222 16.62 0.00 0.00 4.30
2377 3440 4.802051 CAGCGGGTGTGGGGGATG 62.802 72.222 0.00 0.00 0.00 3.51
2380 3443 4.802051 CATCAGCGGGTGTGGGGG 62.802 72.222 7.12 0.00 0.00 5.40
2381 3444 3.687321 CTCATCAGCGGGTGTGGGG 62.687 68.421 7.12 0.00 0.00 4.96
2382 3445 2.124983 CTCATCAGCGGGTGTGGG 60.125 66.667 7.12 1.54 0.00 4.61
2383 3446 2.821366 GCTCATCAGCGGGTGTGG 60.821 66.667 7.12 1.12 35.39 4.17
2399 3462 2.378211 GGGGGAGGGAGCTATAAGC 58.622 63.158 0.00 0.00 42.84 3.09
2424 3487 3.015145 ATTCGAGGGGGTGTGGGG 61.015 66.667 0.00 0.00 0.00 4.96
2425 3488 1.635817 ATGATTCGAGGGGGTGTGGG 61.636 60.000 0.00 0.00 0.00 4.61
2426 3489 0.255890 AATGATTCGAGGGGGTGTGG 59.744 55.000 0.00 0.00 0.00 4.17
2427 3490 2.017049 GAAATGATTCGAGGGGGTGTG 58.983 52.381 0.00 0.00 0.00 3.82
2428 3491 1.064685 GGAAATGATTCGAGGGGGTGT 60.065 52.381 0.00 0.00 36.36 4.16
2429 3492 1.212935 AGGAAATGATTCGAGGGGGTG 59.787 52.381 0.00 0.00 36.36 4.61
2430 3493 1.490910 GAGGAAATGATTCGAGGGGGT 59.509 52.381 0.00 0.00 36.36 4.95
2431 3494 1.202818 GGAGGAAATGATTCGAGGGGG 60.203 57.143 0.00 0.00 36.36 5.40
2432 3495 1.202818 GGGAGGAAATGATTCGAGGGG 60.203 57.143 0.00 0.00 36.36 4.79
2433 3496 1.771255 AGGGAGGAAATGATTCGAGGG 59.229 52.381 0.00 0.00 36.36 4.30
2434 3497 3.471680 GAAGGGAGGAAATGATTCGAGG 58.528 50.000 0.00 0.00 36.36 4.63
2435 3498 3.126831 CGAAGGGAGGAAATGATTCGAG 58.873 50.000 0.00 0.00 41.37 4.04
2436 3499 2.741878 GCGAAGGGAGGAAATGATTCGA 60.742 50.000 9.10 0.00 41.37 3.71
2437 3500 1.599542 GCGAAGGGAGGAAATGATTCG 59.400 52.381 0.00 0.00 41.67 3.34
2438 3501 2.643551 TGCGAAGGGAGGAAATGATTC 58.356 47.619 0.00 0.00 34.66 2.52
2439 3502 2.806945 TGCGAAGGGAGGAAATGATT 57.193 45.000 0.00 0.00 0.00 2.57
2440 3503 2.441001 AGATGCGAAGGGAGGAAATGAT 59.559 45.455 0.00 0.00 0.00 2.45
2441 3504 1.839994 AGATGCGAAGGGAGGAAATGA 59.160 47.619 0.00 0.00 0.00 2.57
2442 3505 2.216898 GAGATGCGAAGGGAGGAAATG 58.783 52.381 0.00 0.00 0.00 2.32
2443 3506 1.839994 TGAGATGCGAAGGGAGGAAAT 59.160 47.619 0.00 0.00 0.00 2.17
2444 3507 1.275666 TGAGATGCGAAGGGAGGAAA 58.724 50.000 0.00 0.00 0.00 3.13
2445 3508 1.414181 GATGAGATGCGAAGGGAGGAA 59.586 52.381 0.00 0.00 0.00 3.36
2446 3509 1.043816 GATGAGATGCGAAGGGAGGA 58.956 55.000 0.00 0.00 0.00 3.71
2447 3510 0.755079 TGATGAGATGCGAAGGGAGG 59.245 55.000 0.00 0.00 0.00 4.30
2448 3511 1.539929 GGTGATGAGATGCGAAGGGAG 60.540 57.143 0.00 0.00 0.00 4.30
2449 3512 0.465705 GGTGATGAGATGCGAAGGGA 59.534 55.000 0.00 0.00 0.00 4.20
2450 3513 0.467384 AGGTGATGAGATGCGAAGGG 59.533 55.000 0.00 0.00 0.00 3.95
2451 3514 1.579698 CAGGTGATGAGATGCGAAGG 58.420 55.000 0.00 0.00 0.00 3.46
2452 3515 0.935898 GCAGGTGATGAGATGCGAAG 59.064 55.000 0.00 0.00 0.00 3.79
2453 3516 0.462581 GGCAGGTGATGAGATGCGAA 60.463 55.000 0.00 0.00 39.58 4.70
2454 3517 1.144716 GGCAGGTGATGAGATGCGA 59.855 57.895 0.00 0.00 39.58 5.10
2455 3518 1.890979 GGGCAGGTGATGAGATGCG 60.891 63.158 0.00 0.00 39.58 4.73
2456 3519 0.106819 AAGGGCAGGTGATGAGATGC 60.107 55.000 0.00 0.00 37.95 3.91
2457 3520 1.064906 ACAAGGGCAGGTGATGAGATG 60.065 52.381 0.00 0.00 0.00 2.90
2458 3521 1.293062 ACAAGGGCAGGTGATGAGAT 58.707 50.000 0.00 0.00 0.00 2.75
2459 3522 1.067295 AACAAGGGCAGGTGATGAGA 58.933 50.000 0.00 0.00 0.00 3.27
2460 3523 1.171308 CAACAAGGGCAGGTGATGAG 58.829 55.000 0.00 0.00 0.00 2.90
2461 3524 0.478072 ACAACAAGGGCAGGTGATGA 59.522 50.000 0.00 0.00 0.00 2.92
2462 3525 1.331214 AACAACAAGGGCAGGTGATG 58.669 50.000 0.00 0.00 0.00 3.07
2463 3526 1.963515 GAAACAACAAGGGCAGGTGAT 59.036 47.619 0.00 0.00 0.00 3.06
2464 3527 1.398692 GAAACAACAAGGGCAGGTGA 58.601 50.000 0.00 0.00 0.00 4.02
2465 3528 0.389025 GGAAACAACAAGGGCAGGTG 59.611 55.000 0.00 0.00 0.00 4.00
2466 3529 0.032615 TGGAAACAACAAGGGCAGGT 60.033 50.000 0.00 0.00 37.44 4.00
2467 3530 0.675633 CTGGAAACAACAAGGGCAGG 59.324 55.000 0.00 0.00 42.06 4.85
2468 3531 0.032540 GCTGGAAACAACAAGGGCAG 59.967 55.000 0.00 0.00 42.06 4.85
2469 3532 1.733402 CGCTGGAAACAACAAGGGCA 61.733 55.000 0.00 0.00 42.06 5.36
2470 3533 1.007387 CGCTGGAAACAACAAGGGC 60.007 57.895 0.00 0.00 42.06 5.19
2471 3534 1.007387 GCGCTGGAAACAACAAGGG 60.007 57.895 0.00 0.00 42.06 3.95
2472 3535 1.370414 CGCGCTGGAAACAACAAGG 60.370 57.895 5.56 0.00 42.06 3.61
2473 3536 1.370414 CCGCGCTGGAAACAACAAG 60.370 57.895 12.11 0.00 42.06 3.16
2474 3537 2.718731 CCGCGCTGGAAACAACAA 59.281 55.556 12.11 0.00 42.06 2.83
2475 3538 3.959975 GCCGCGCTGGAAACAACA 61.960 61.111 20.06 0.00 42.06 3.33
2476 3539 2.945398 TTTGCCGCGCTGGAAACAAC 62.945 55.000 20.06 3.98 42.06 3.32
2477 3540 2.284798 TTTTGCCGCGCTGGAAACAA 62.285 50.000 17.40 10.80 42.06 2.83
2478 3541 2.081425 ATTTTGCCGCGCTGGAAACA 62.081 50.000 17.40 8.89 42.00 2.83
2479 3542 0.943835 AATTTTGCCGCGCTGGAAAC 60.944 50.000 17.40 3.21 42.00 2.78
2480 3543 0.249657 AAATTTTGCCGCGCTGGAAA 60.250 45.000 20.06 17.26 42.00 3.13
2481 3544 0.249657 AAAATTTTGCCGCGCTGGAA 60.250 45.000 20.06 11.99 42.00 3.53
2482 3545 0.943359 CAAAATTTTGCCGCGCTGGA 60.943 50.000 17.48 5.61 42.00 3.86
2483 3546 1.220817 ACAAAATTTTGCCGCGCTGG 61.221 50.000 26.94 10.08 41.79 4.85
2484 3547 0.111178 CACAAAATTTTGCCGCGCTG 60.111 50.000 26.94 14.75 41.79 5.18
2485 3548 0.529555 ACACAAAATTTTGCCGCGCT 60.530 45.000 26.94 7.17 41.79 5.92
2486 3549 0.303191 AACACAAAATTTTGCCGCGC 59.697 45.000 26.94 0.00 41.79 6.86
2487 3550 2.728368 AAACACAAAATTTTGCCGCG 57.272 40.000 26.94 16.60 41.79 6.46
2488 3551 3.783418 GTCAAAACACAAAATTTTGCCGC 59.217 39.130 26.94 8.39 43.62 6.53
2489 3552 4.338596 GGTCAAAACACAAAATTTTGCCG 58.661 39.130 26.94 20.88 43.62 5.69
2490 3553 4.397730 AGGGTCAAAACACAAAATTTTGCC 59.602 37.500 26.94 17.70 43.62 4.52
2491 3554 5.559427 AGGGTCAAAACACAAAATTTTGC 57.441 34.783 26.94 10.69 43.62 3.68
2492 3555 8.809159 AAAAAGGGTCAAAACACAAAATTTTG 57.191 26.923 25.73 25.73 44.74 2.44
2493 3556 8.855110 AGAAAAAGGGTCAAAACACAAAATTTT 58.145 25.926 0.00 0.00 0.00 1.82
2494 3557 8.296000 CAGAAAAAGGGTCAAAACACAAAATTT 58.704 29.630 0.00 0.00 0.00 1.82
2495 3558 7.663493 TCAGAAAAAGGGTCAAAACACAAAATT 59.337 29.630 0.00 0.00 0.00 1.82
2496 3559 7.164803 TCAGAAAAAGGGTCAAAACACAAAAT 58.835 30.769 0.00 0.00 0.00 1.82
2497 3560 6.525629 TCAGAAAAAGGGTCAAAACACAAAA 58.474 32.000 0.00 0.00 0.00 2.44
2498 3561 6.102897 TCAGAAAAAGGGTCAAAACACAAA 57.897 33.333 0.00 0.00 0.00 2.83
2499 3562 5.730296 TCAGAAAAAGGGTCAAAACACAA 57.270 34.783 0.00 0.00 0.00 3.33
2500 3563 5.730296 TTCAGAAAAAGGGTCAAAACACA 57.270 34.783 0.00 0.00 0.00 3.72
2501 3564 6.163476 ACTTTCAGAAAAAGGGTCAAAACAC 58.837 36.000 0.00 0.00 0.00 3.32
2502 3565 6.353404 ACTTTCAGAAAAAGGGTCAAAACA 57.647 33.333 0.00 0.00 0.00 2.83
2503 3566 8.766000 TTAACTTTCAGAAAAAGGGTCAAAAC 57.234 30.769 0.00 0.00 0.00 2.43
2504 3567 9.594478 GATTAACTTTCAGAAAAAGGGTCAAAA 57.406 29.630 0.00 0.00 0.00 2.44
2505 3568 8.754080 TGATTAACTTTCAGAAAAAGGGTCAAA 58.246 29.630 0.00 0.00 0.00 2.69
2506 3569 8.299990 TGATTAACTTTCAGAAAAAGGGTCAA 57.700 30.769 0.00 0.00 0.00 3.18
2507 3570 7.889873 TGATTAACTTTCAGAAAAAGGGTCA 57.110 32.000 0.00 0.00 0.00 4.02
2508 3571 8.630037 TCTTGATTAACTTTCAGAAAAAGGGTC 58.370 33.333 0.00 0.00 0.00 4.46
2509 3572 8.533569 TCTTGATTAACTTTCAGAAAAAGGGT 57.466 30.769 0.00 0.00 0.00 4.34
2510 3573 9.631452 GATCTTGATTAACTTTCAGAAAAAGGG 57.369 33.333 0.00 0.00 0.00 3.95
2515 3578 9.003658 GGTCAGATCTTGATTAACTTTCAGAAA 57.996 33.333 0.00 0.00 38.29 2.52
2516 3579 7.607991 GGGTCAGATCTTGATTAACTTTCAGAA 59.392 37.037 0.00 0.00 38.29 3.02
2517 3580 7.106239 GGGTCAGATCTTGATTAACTTTCAGA 58.894 38.462 0.00 0.00 38.29 3.27
2518 3581 6.881065 TGGGTCAGATCTTGATTAACTTTCAG 59.119 38.462 0.00 0.00 38.29 3.02
2519 3582 6.778821 TGGGTCAGATCTTGATTAACTTTCA 58.221 36.000 0.00 0.00 38.29 2.69
2520 3583 7.391833 ACTTGGGTCAGATCTTGATTAACTTTC 59.608 37.037 0.00 0.00 38.29 2.62
2521 3584 7.234355 ACTTGGGTCAGATCTTGATTAACTTT 58.766 34.615 0.00 0.00 38.29 2.66
2522 3585 6.784031 ACTTGGGTCAGATCTTGATTAACTT 58.216 36.000 0.00 0.00 38.29 2.66
2523 3586 6.380079 ACTTGGGTCAGATCTTGATTAACT 57.620 37.500 0.00 0.00 38.29 2.24
2524 3587 7.308435 CAAACTTGGGTCAGATCTTGATTAAC 58.692 38.462 0.00 0.00 38.29 2.01
2525 3588 6.071952 GCAAACTTGGGTCAGATCTTGATTAA 60.072 38.462 0.00 0.00 38.29 1.40
2526 3589 5.415701 GCAAACTTGGGTCAGATCTTGATTA 59.584 40.000 0.00 0.00 38.29 1.75
2527 3590 4.219288 GCAAACTTGGGTCAGATCTTGATT 59.781 41.667 0.00 0.00 38.29 2.57
2528 3591 3.760684 GCAAACTTGGGTCAGATCTTGAT 59.239 43.478 0.00 0.00 38.29 2.57
2529 3592 3.149196 GCAAACTTGGGTCAGATCTTGA 58.851 45.455 0.00 0.00 0.00 3.02
2530 3593 2.886523 TGCAAACTTGGGTCAGATCTTG 59.113 45.455 0.00 0.00 0.00 3.02
2531 3594 3.228188 TGCAAACTTGGGTCAGATCTT 57.772 42.857 0.00 0.00 0.00 2.40
2532 3595 2.957402 TGCAAACTTGGGTCAGATCT 57.043 45.000 0.00 0.00 0.00 2.75
2533 3596 4.320608 TTTTGCAAACTTGGGTCAGATC 57.679 40.909 12.39 0.00 0.00 2.75
2534 3597 4.751767 TTTTTGCAAACTTGGGTCAGAT 57.248 36.364 12.39 0.00 0.00 2.90
2535 3598 4.751767 ATTTTTGCAAACTTGGGTCAGA 57.248 36.364 12.39 0.00 0.00 3.27
2536 3599 5.502220 CGAAATTTTTGCAAACTTGGGTCAG 60.502 40.000 12.39 0.00 0.00 3.51
2537 3600 4.331168 CGAAATTTTTGCAAACTTGGGTCA 59.669 37.500 12.39 0.00 0.00 4.02
2538 3601 4.260579 CCGAAATTTTTGCAAACTTGGGTC 60.261 41.667 12.39 4.27 26.19 4.46
2539 3602 3.625313 CCGAAATTTTTGCAAACTTGGGT 59.375 39.130 12.39 0.00 26.19 4.51
2540 3603 3.873952 TCCGAAATTTTTGCAAACTTGGG 59.126 39.130 12.39 15.14 30.52 4.12
2541 3604 5.476752 TTCCGAAATTTTTGCAAACTTGG 57.523 34.783 12.39 10.02 0.00 3.61
2542 3605 6.847289 CAGATTCCGAAATTTTTGCAAACTTG 59.153 34.615 12.39 1.08 0.00 3.16
2543 3606 6.760770 TCAGATTCCGAAATTTTTGCAAACTT 59.239 30.769 12.39 5.86 0.00 2.66
2544 3607 6.200854 GTCAGATTCCGAAATTTTTGCAAACT 59.799 34.615 12.39 0.00 0.00 2.66
2545 3608 6.354858 GTCAGATTCCGAAATTTTTGCAAAC 58.645 36.000 12.39 0.00 0.00 2.93
2546 3609 5.465056 GGTCAGATTCCGAAATTTTTGCAAA 59.535 36.000 8.05 8.05 0.00 3.68
2547 3610 4.987912 GGTCAGATTCCGAAATTTTTGCAA 59.012 37.500 0.00 0.00 0.00 4.08
2548 3611 4.555262 GGTCAGATTCCGAAATTTTTGCA 58.445 39.130 0.00 0.00 0.00 4.08
2549 3612 3.926527 GGGTCAGATTCCGAAATTTTTGC 59.073 43.478 0.00 0.00 0.00 3.68
2550 3613 5.391312 AGGGTCAGATTCCGAAATTTTTG 57.609 39.130 0.00 0.00 0.00 2.44
2551 3614 6.419484 AAAGGGTCAGATTCCGAAATTTTT 57.581 33.333 0.00 0.00 0.00 1.94
2552 3615 6.223120 CAAAAGGGTCAGATTCCGAAATTTT 58.777 36.000 0.00 0.00 0.00 1.82
2553 3616 5.783111 CAAAAGGGTCAGATTCCGAAATTT 58.217 37.500 0.00 0.00 0.00 1.82
2554 3617 4.321974 GCAAAAGGGTCAGATTCCGAAATT 60.322 41.667 0.00 0.00 0.00 1.82
2555 3618 3.193479 GCAAAAGGGTCAGATTCCGAAAT 59.807 43.478 0.00 0.00 0.00 2.17
2556 3619 2.556622 GCAAAAGGGTCAGATTCCGAAA 59.443 45.455 0.00 0.00 0.00 3.46
2557 3620 2.159382 GCAAAAGGGTCAGATTCCGAA 58.841 47.619 0.00 0.00 0.00 4.30
2558 3621 1.351017 AGCAAAAGGGTCAGATTCCGA 59.649 47.619 0.00 0.00 0.00 4.55
2559 3622 1.826385 AGCAAAAGGGTCAGATTCCG 58.174 50.000 0.00 0.00 0.00 4.30
2560 3623 3.017442 GGTAGCAAAAGGGTCAGATTCC 58.983 50.000 0.00 0.00 0.00 3.01
2561 3624 2.678336 CGGTAGCAAAAGGGTCAGATTC 59.322 50.000 0.00 0.00 0.00 2.52
2562 3625 2.711542 CGGTAGCAAAAGGGTCAGATT 58.288 47.619 0.00 0.00 0.00 2.40
2563 3626 1.679032 GCGGTAGCAAAAGGGTCAGAT 60.679 52.381 0.00 0.00 44.35 2.90
2564 3627 0.321298 GCGGTAGCAAAAGGGTCAGA 60.321 55.000 0.00 0.00 44.35 3.27
2565 3628 2.171635 GCGGTAGCAAAAGGGTCAG 58.828 57.895 0.00 0.00 44.35 3.51
2566 3629 4.390048 GCGGTAGCAAAAGGGTCA 57.610 55.556 0.00 0.00 44.35 4.02
2577 3640 3.797353 ATGCACCCCTGGCGGTAG 61.797 66.667 6.55 3.92 33.67 3.18
2578 3641 4.108299 CATGCACCCCTGGCGGTA 62.108 66.667 6.55 0.00 33.67 4.02
2581 3644 4.720902 TGTCATGCACCCCTGGCG 62.721 66.667 0.00 0.00 0.00 5.69
2582 3645 2.196997 TACTGTCATGCACCCCTGGC 62.197 60.000 0.00 0.00 0.00 4.85
2583 3646 0.107508 CTACTGTCATGCACCCCTGG 60.108 60.000 0.00 0.00 0.00 4.45
2584 3647 0.107508 CCTACTGTCATGCACCCCTG 60.108 60.000 0.00 0.00 0.00 4.45
2585 3648 1.274703 CCCTACTGTCATGCACCCCT 61.275 60.000 0.00 0.00 0.00 4.79
2586 3649 1.224592 CCCTACTGTCATGCACCCC 59.775 63.158 0.00 0.00 0.00 4.95
2587 3650 0.392998 CACCCTACTGTCATGCACCC 60.393 60.000 0.00 0.00 0.00 4.61
2588 3651 0.324943 ACACCCTACTGTCATGCACC 59.675 55.000 0.00 0.00 0.00 5.01
2589 3652 3.328382 TTACACCCTACTGTCATGCAC 57.672 47.619 0.00 0.00 0.00 4.57
2590 3653 4.442893 GCTATTACACCCTACTGTCATGCA 60.443 45.833 0.00 0.00 0.00 3.96
2591 3654 4.058817 GCTATTACACCCTACTGTCATGC 58.941 47.826 0.00 0.00 0.00 4.06
2592 3655 4.345257 AGGCTATTACACCCTACTGTCATG 59.655 45.833 0.00 0.00 0.00 3.07
2593 3656 4.557705 AGGCTATTACACCCTACTGTCAT 58.442 43.478 0.00 0.00 0.00 3.06
2594 3657 3.990369 AGGCTATTACACCCTACTGTCA 58.010 45.455 0.00 0.00 0.00 3.58
2595 3658 4.280425 GGTAGGCTATTACACCCTACTGTC 59.720 50.000 13.81 0.00 46.54 3.51
2596 3659 4.221530 GGTAGGCTATTACACCCTACTGT 58.778 47.826 13.81 0.00 46.54 3.55
2597 3660 3.255149 CGGTAGGCTATTACACCCTACTG 59.745 52.174 13.81 11.79 46.54 2.74
2598 3661 3.117360 ACGGTAGGCTATTACACCCTACT 60.117 47.826 13.81 0.00 46.54 2.57
2599 3662 3.225940 ACGGTAGGCTATTACACCCTAC 58.774 50.000 0.00 7.39 46.60 3.18
2600 3663 3.117550 TGACGGTAGGCTATTACACCCTA 60.118 47.826 0.00 0.00 0.00 3.53
2601 3664 2.314246 GACGGTAGGCTATTACACCCT 58.686 52.381 0.00 0.00 0.00 4.34
2602 3665 2.034124 TGACGGTAGGCTATTACACCC 58.966 52.381 0.00 0.00 0.00 4.61
2603 3666 2.035576 CCTGACGGTAGGCTATTACACC 59.964 54.545 0.00 0.00 0.00 4.16
2604 3667 2.035576 CCCTGACGGTAGGCTATTACAC 59.964 54.545 0.00 0.00 36.47 2.90
2605 3668 2.091720 TCCCTGACGGTAGGCTATTACA 60.092 50.000 0.00 0.00 36.47 2.41
2606 3669 2.295629 GTCCCTGACGGTAGGCTATTAC 59.704 54.545 0.00 0.00 36.47 1.89
2607 3670 2.590821 GTCCCTGACGGTAGGCTATTA 58.409 52.381 0.00 0.00 36.47 0.98
2608 3671 1.411041 GTCCCTGACGGTAGGCTATT 58.589 55.000 0.00 0.00 36.47 1.73
2609 3672 0.469518 GGTCCCTGACGGTAGGCTAT 60.470 60.000 0.00 0.00 36.47 2.97
2610 3673 1.076485 GGTCCCTGACGGTAGGCTA 60.076 63.158 1.94 0.00 36.47 3.93
2611 3674 2.363925 GGTCCCTGACGGTAGGCT 60.364 66.667 0.00 0.00 36.47 4.58
2612 3675 0.685458 TAAGGTCCCTGACGGTAGGC 60.685 60.000 1.94 0.00 36.47 3.93
2613 3676 1.479730 GTTAAGGTCCCTGACGGTAGG 59.520 57.143 0.54 0.54 37.59 3.18
2614 3677 1.133790 CGTTAAGGTCCCTGACGGTAG 59.866 57.143 12.27 0.00 34.77 3.18
2615 3678 1.176527 CGTTAAGGTCCCTGACGGTA 58.823 55.000 12.27 0.00 34.77 4.02
2616 3679 1.538687 CCGTTAAGGTCCCTGACGGT 61.539 60.000 23.31 0.00 44.40 4.83
2617 3680 1.217244 CCGTTAAGGTCCCTGACGG 59.783 63.158 20.37 20.37 44.21 4.79
2618 3681 4.904466 CCGTTAAGGTCCCTGACG 57.096 61.111 12.87 12.87 36.69 4.35
2627 3690 7.127647 GGTAGGGATGTTTTCTACCGTTAAGG 61.128 46.154 0.00 0.00 42.16 2.69
2628 3691 5.814188 GGTAGGGATGTTTTCTACCGTTAAG 59.186 44.000 0.00 0.00 42.16 1.85
2629 3692 5.733676 GGTAGGGATGTTTTCTACCGTTAA 58.266 41.667 0.00 0.00 42.16 2.01
2630 3693 5.343307 GGTAGGGATGTTTTCTACCGTTA 57.657 43.478 0.00 0.00 42.16 3.18
2631 3694 4.212143 GGTAGGGATGTTTTCTACCGTT 57.788 45.455 0.00 0.00 42.16 4.44
2632 3695 3.900966 GGTAGGGATGTTTTCTACCGT 57.099 47.619 0.00 0.00 42.16 4.83
2634 3697 2.558378 GCGGTAGGGATGTTTTCTACC 58.442 52.381 8.30 8.30 45.71 3.18
2635 3698 2.093341 TGGCGGTAGGGATGTTTTCTAC 60.093 50.000 0.00 0.00 34.31 2.59
2636 3699 2.189676 TGGCGGTAGGGATGTTTTCTA 58.810 47.619 0.00 0.00 0.00 2.10
2637 3700 0.988832 TGGCGGTAGGGATGTTTTCT 59.011 50.000 0.00 0.00 0.00 2.52
2638 3701 1.828979 TTGGCGGTAGGGATGTTTTC 58.171 50.000 0.00 0.00 0.00 2.29
2639 3702 1.890489 GTTTGGCGGTAGGGATGTTTT 59.110 47.619 0.00 0.00 0.00 2.43
2640 3703 1.202952 TGTTTGGCGGTAGGGATGTTT 60.203 47.619 0.00 0.00 0.00 2.83
2641 3704 0.402504 TGTTTGGCGGTAGGGATGTT 59.597 50.000 0.00 0.00 0.00 2.71
2642 3705 0.035439 CTGTTTGGCGGTAGGGATGT 60.035 55.000 0.00 0.00 0.00 3.06
2643 3706 0.748005 CCTGTTTGGCGGTAGGGATG 60.748 60.000 0.00 0.00 0.00 3.51
2644 3707 1.607612 CCTGTTTGGCGGTAGGGAT 59.392 57.895 0.00 0.00 0.00 3.85
2645 3708 3.074281 CCTGTTTGGCGGTAGGGA 58.926 61.111 0.00 0.00 0.00 4.20
2654 3717 2.033448 TACCGCCAGCCTGTTTGG 59.967 61.111 0.00 0.00 38.78 3.28
2655 3718 2.690778 GCTACCGCCAGCCTGTTTG 61.691 63.158 0.00 0.00 35.40 2.93
2656 3719 2.359975 GCTACCGCCAGCCTGTTT 60.360 61.111 0.00 0.00 35.40 2.83
2666 3729 1.449070 GGTTGTACAGGGCTACCGC 60.449 63.158 0.00 0.00 43.47 5.68
2667 3730 1.219935 GGGTTGTACAGGGCTACCG 59.780 63.158 7.43 0.00 43.47 4.02
2668 3731 1.483827 GTAGGGTTGTACAGGGCTACC 59.516 57.143 5.26 5.26 0.00 3.18
2669 3732 1.483827 GGTAGGGTTGTACAGGGCTAC 59.516 57.143 0.00 0.00 0.00 3.58
2670 3733 1.079156 TGGTAGGGTTGTACAGGGCTA 59.921 52.381 0.00 0.00 0.00 3.93
2671 3734 0.178885 TGGTAGGGTTGTACAGGGCT 60.179 55.000 0.00 0.00 0.00 5.19
2672 3735 0.035725 GTGGTAGGGTTGTACAGGGC 60.036 60.000 0.00 0.00 0.00 5.19
2673 3736 1.354101 TGTGGTAGGGTTGTACAGGG 58.646 55.000 0.00 0.00 0.00 4.45
2674 3737 2.290071 CCTTGTGGTAGGGTTGTACAGG 60.290 54.545 0.00 0.00 0.00 4.00
2675 3738 2.370849 ACCTTGTGGTAGGGTTGTACAG 59.629 50.000 0.00 0.00 46.43 2.74
2676 3739 2.105134 CACCTTGTGGTAGGGTTGTACA 59.895 50.000 0.00 0.00 46.60 2.90
2677 3740 2.774687 CACCTTGTGGTAGGGTTGTAC 58.225 52.381 0.00 0.00 46.60 2.90
2678 3741 1.072648 GCACCTTGTGGTAGGGTTGTA 59.927 52.381 0.00 0.00 46.60 2.41
2679 3742 0.179001 GCACCTTGTGGTAGGGTTGT 60.179 55.000 0.00 0.00 46.60 3.32
2680 3743 0.893727 GGCACCTTGTGGTAGGGTTG 60.894 60.000 0.00 0.00 46.60 3.77
2681 3744 1.065997 AGGCACCTTGTGGTAGGGTT 61.066 55.000 0.00 0.00 46.60 4.11
2682 3745 1.463410 AGGCACCTTGTGGTAGGGT 60.463 57.895 0.00 0.00 46.60 4.34
2683 3746 1.002134 CAGGCACCTTGTGGTAGGG 60.002 63.158 0.00 0.00 46.60 3.53
2684 3747 1.002134 CCAGGCACCTTGTGGTAGG 60.002 63.158 0.00 0.00 46.60 3.18
2685 3748 1.675641 GCCAGGCACCTTGTGGTAG 60.676 63.158 6.55 0.00 46.60 3.18
2686 3749 2.434331 GCCAGGCACCTTGTGGTA 59.566 61.111 6.55 0.00 46.60 3.25
2689 3752 3.545124 TACCGCCAGGCACCTTGTG 62.545 63.158 13.30 0.00 42.76 3.33
2690 3753 3.246112 TACCGCCAGGCACCTTGT 61.246 61.111 13.30 2.57 42.76 3.16
2691 3754 2.436646 CTACCGCCAGGCACCTTG 60.437 66.667 13.30 0.00 42.76 3.61
2692 3755 3.717294 CCTACCGCCAGGCACCTT 61.717 66.667 13.30 0.00 42.76 3.50
2717 3780 4.878439 TCTAAGTATGAAACACAGTGCGT 58.122 39.130 0.00 0.00 0.00 5.24
2718 3781 5.633601 TCTTCTAAGTATGAAACACAGTGCG 59.366 40.000 0.00 0.00 0.00 5.34
2719 3782 7.421530 TTCTTCTAAGTATGAAACACAGTGC 57.578 36.000 0.00 0.00 0.00 4.40
2723 3786 9.677567 GCAAATTTCTTCTAAGTATGAAACACA 57.322 29.630 0.00 0.00 0.00 3.72
2724 3787 9.677567 TGCAAATTTCTTCTAAGTATGAAACAC 57.322 29.630 0.00 0.00 0.00 3.32
2725 3788 9.897744 CTGCAAATTTCTTCTAAGTATGAAACA 57.102 29.630 0.00 0.00 0.00 2.83
2726 3789 9.899226 ACTGCAAATTTCTTCTAAGTATGAAAC 57.101 29.630 0.00 0.00 0.00 2.78
2729 3792 9.383519 CCTACTGCAAATTTCTTCTAAGTATGA 57.616 33.333 0.00 0.00 0.00 2.15
2730 3793 8.616076 CCCTACTGCAAATTTCTTCTAAGTATG 58.384 37.037 0.00 0.00 0.00 2.39
2731 3794 7.283354 GCCCTACTGCAAATTTCTTCTAAGTAT 59.717 37.037 0.00 0.00 0.00 2.12
2732 3795 6.598064 GCCCTACTGCAAATTTCTTCTAAGTA 59.402 38.462 0.00 0.00 0.00 2.24
2733 3796 5.416013 GCCCTACTGCAAATTTCTTCTAAGT 59.584 40.000 0.00 0.00 0.00 2.24
2734 3797 5.415701 TGCCCTACTGCAAATTTCTTCTAAG 59.584 40.000 0.00 0.00 38.56 2.18
2735 3798 5.321102 TGCCCTACTGCAAATTTCTTCTAA 58.679 37.500 0.00 0.00 38.56 2.10
2736 3799 4.917385 TGCCCTACTGCAAATTTCTTCTA 58.083 39.130 0.00 0.00 38.56 2.10
2737 3800 3.766545 TGCCCTACTGCAAATTTCTTCT 58.233 40.909 0.00 0.00 38.56 2.85
2738 3801 4.427312 CATGCCCTACTGCAAATTTCTTC 58.573 43.478 0.00 0.00 45.84 2.87
2739 3802 3.368739 GCATGCCCTACTGCAAATTTCTT 60.369 43.478 6.36 0.00 45.84 2.52
2740 3803 2.167075 GCATGCCCTACTGCAAATTTCT 59.833 45.455 6.36 0.00 45.84 2.52
2741 3804 2.094078 TGCATGCCCTACTGCAAATTTC 60.094 45.455 16.68 0.00 44.87 2.17
2742 3805 1.901159 TGCATGCCCTACTGCAAATTT 59.099 42.857 16.68 0.00 44.87 1.82
2743 3806 1.559368 TGCATGCCCTACTGCAAATT 58.441 45.000 16.68 0.00 44.87 1.82
2744 3807 3.286404 TGCATGCCCTACTGCAAAT 57.714 47.368 16.68 0.00 44.87 2.32
2745 3808 4.839262 TGCATGCCCTACTGCAAA 57.161 50.000 16.68 0.00 44.87 3.68
2747 3810 1.678635 GGTTGCATGCCCTACTGCA 60.679 57.895 16.68 0.00 46.08 4.41
2748 3811 2.418083 GGGTTGCATGCCCTACTGC 61.418 63.158 16.68 0.00 42.81 4.40
2749 3812 3.924507 GGGTTGCATGCCCTACTG 58.075 61.111 16.68 0.00 42.81 2.74
2754 3817 2.828549 CGGTAGGGTTGCATGCCC 60.829 66.667 16.68 16.67 46.43 5.36
2755 3818 3.518068 GCGGTAGGGTTGCATGCC 61.518 66.667 16.68 0.00 0.00 4.40
2756 3819 3.518068 GGCGGTAGGGTTGCATGC 61.518 66.667 11.82 11.82 0.00 4.06
2757 3820 2.045438 TGGCGGTAGGGTTGCATG 60.045 61.111 0.00 0.00 0.00 4.06
2758 3821 2.272146 CTGGCGGTAGGGTTGCAT 59.728 61.111 0.00 0.00 0.00 3.96
2759 3822 4.028490 CCTGGCGGTAGGGTTGCA 62.028 66.667 0.00 0.00 34.06 4.08
2765 3828 1.447643 CAAGATCCCTGGCGGTAGG 59.552 63.158 0.00 0.00 37.59 3.18
2766 3829 1.447643 CCAAGATCCCTGGCGGTAG 59.552 63.158 0.00 0.00 0.00 3.18
2767 3830 2.742116 GCCAAGATCCCTGGCGGTA 61.742 63.158 18.03 0.00 39.06 4.02
2768 3831 4.115199 GCCAAGATCCCTGGCGGT 62.115 66.667 18.03 0.00 39.06 5.68
2771 3834 2.666596 CTACCGCCAAGATCCCTGGC 62.667 65.000 21.44 21.44 44.69 4.85
2772 3835 1.447643 CTACCGCCAAGATCCCTGG 59.552 63.158 7.02 7.02 0.00 4.45
2773 3836 1.447643 CCTACCGCCAAGATCCCTG 59.552 63.158 0.00 0.00 0.00 4.45
2774 3837 2.444256 GCCTACCGCCAAGATCCCT 61.444 63.158 0.00 0.00 0.00 4.20
2775 3838 2.111251 GCCTACCGCCAAGATCCC 59.889 66.667 0.00 0.00 0.00 3.85
2776 3839 1.227674 CAGCCTACCGCCAAGATCC 60.228 63.158 0.00 0.00 38.78 3.36
2777 3840 0.107654 AACAGCCTACCGCCAAGATC 60.108 55.000 0.00 0.00 38.78 2.75
2778 3841 1.200519 TAACAGCCTACCGCCAAGAT 58.799 50.000 0.00 0.00 38.78 2.40
2779 3842 1.200519 ATAACAGCCTACCGCCAAGA 58.799 50.000 0.00 0.00 38.78 3.02
2780 3843 2.870411 GTTATAACAGCCTACCGCCAAG 59.130 50.000 10.81 0.00 38.78 3.61
2781 3844 2.420408 GGTTATAACAGCCTACCGCCAA 60.420 50.000 17.16 0.00 38.78 4.52
2782 3845 1.139455 GGTTATAACAGCCTACCGCCA 59.861 52.381 17.16 0.00 38.78 5.69
2783 3846 1.415289 AGGTTATAACAGCCTACCGCC 59.585 52.381 17.16 0.00 35.79 6.13
2784 3847 2.904697 AGGTTATAACAGCCTACCGC 57.095 50.000 17.16 0.00 35.79 5.68
2788 3851 4.535781 TGACGGTAGGTTATAACAGCCTA 58.464 43.478 17.16 7.04 38.99 3.93
2789 3852 3.368248 TGACGGTAGGTTATAACAGCCT 58.632 45.455 17.16 7.99 41.48 4.58
2790 3853 3.806625 TGACGGTAGGTTATAACAGCC 57.193 47.619 17.16 13.32 0.00 4.85
2791 3854 4.056050 CCATGACGGTAGGTTATAACAGC 58.944 47.826 17.16 6.52 0.00 4.40
2792 3855 5.287226 GTCCATGACGGTAGGTTATAACAG 58.713 45.833 17.16 5.56 35.57 3.16
2793 3856 4.099881 GGTCCATGACGGTAGGTTATAACA 59.900 45.833 17.16 0.00 35.57 2.41
2794 3857 4.502087 GGGTCCATGACGGTAGGTTATAAC 60.502 50.000 7.09 7.09 35.57 1.89
2795 3858 3.642848 GGGTCCATGACGGTAGGTTATAA 59.357 47.826 0.00 0.00 35.57 0.98
2796 3859 3.117016 AGGGTCCATGACGGTAGGTTATA 60.117 47.826 0.00 0.00 35.57 0.98
2797 3860 2.044758 GGGTCCATGACGGTAGGTTAT 58.955 52.381 0.00 0.00 35.57 1.89
2798 3861 1.007479 AGGGTCCATGACGGTAGGTTA 59.993 52.381 0.00 0.00 35.57 2.85
2799 3862 0.252558 AGGGTCCATGACGGTAGGTT 60.253 55.000 0.00 0.00 35.57 3.50
2800 3863 0.976073 CAGGGTCCATGACGGTAGGT 60.976 60.000 0.00 0.00 35.57 3.08
2801 3864 1.686325 CCAGGGTCCATGACGGTAGG 61.686 65.000 4.74 0.00 35.57 3.18
2802 3865 1.823295 CCAGGGTCCATGACGGTAG 59.177 63.158 4.74 0.00 35.57 3.18
2803 3866 2.363975 GCCAGGGTCCATGACGGTA 61.364 63.158 4.74 0.00 35.57 4.02
2804 3867 3.717294 GCCAGGGTCCATGACGGT 61.717 66.667 4.74 0.00 35.57 4.83
2805 3868 4.838152 CGCCAGGGTCCATGACGG 62.838 72.222 4.74 0.00 32.65 4.79
2806 3869 4.838152 CCGCCAGGGTCCATGACG 62.838 72.222 4.74 4.96 32.65 4.35
2815 3878 0.679960 CCCTTTTCTTACCGCCAGGG 60.680 60.000 0.00 0.00 43.47 4.45
2816 3879 0.037734 ACCCTTTTCTTACCGCCAGG 59.962 55.000 0.00 0.00 45.13 4.45
2817 3880 1.271163 TGACCCTTTTCTTACCGCCAG 60.271 52.381 0.00 0.00 0.00 4.85
2818 3881 0.766131 TGACCCTTTTCTTACCGCCA 59.234 50.000 0.00 0.00 0.00 5.69
2819 3882 1.002773 TCTGACCCTTTTCTTACCGCC 59.997 52.381 0.00 0.00 0.00 6.13
2820 3883 2.467566 TCTGACCCTTTTCTTACCGC 57.532 50.000 0.00 0.00 0.00 5.68
2821 3884 3.532542 GGATCTGACCCTTTTCTTACCG 58.467 50.000 0.00 0.00 0.00 4.02
2822 3885 3.887352 GGGATCTGACCCTTTTCTTACC 58.113 50.000 7.74 0.00 45.90 2.85
2832 3895 5.907866 TTTAAAATTTCGGGATCTGACCC 57.092 39.130 0.00 0.00 45.92 4.46
2833 3896 6.330278 CCTTTTAAAATTTCGGGATCTGACC 58.670 40.000 0.09 0.00 0.00 4.02
2834 3897 5.805486 GCCTTTTAAAATTTCGGGATCTGAC 59.195 40.000 0.09 0.00 0.00 3.51
2835 3898 5.478679 TGCCTTTTAAAATTTCGGGATCTGA 59.521 36.000 0.09 0.00 0.00 3.27
2836 3899 5.719173 TGCCTTTTAAAATTTCGGGATCTG 58.281 37.500 0.09 0.00 0.00 2.90
2837 3900 5.105351 CCTGCCTTTTAAAATTTCGGGATCT 60.105 40.000 0.09 0.00 0.00 2.75
2838 3901 5.109210 CCTGCCTTTTAAAATTTCGGGATC 58.891 41.667 0.09 0.00 0.00 3.36
2839 3902 4.081142 CCCTGCCTTTTAAAATTTCGGGAT 60.081 41.667 17.07 0.00 0.00 3.85
2840 3903 3.259625 CCCTGCCTTTTAAAATTTCGGGA 59.740 43.478 17.07 9.56 0.00 5.14
2841 3904 3.007506 ACCCTGCCTTTTAAAATTTCGGG 59.992 43.478 17.29 17.29 0.00 5.14
2842 3905 4.242475 GACCCTGCCTTTTAAAATTTCGG 58.758 43.478 0.09 0.42 0.00 4.30
2843 3906 4.877282 TGACCCTGCCTTTTAAAATTTCG 58.123 39.130 0.09 0.00 0.00 3.46
2844 3907 7.661437 AGATTTGACCCTGCCTTTTAAAATTTC 59.339 33.333 0.09 0.00 0.00 2.17
2845 3908 7.517320 AGATTTGACCCTGCCTTTTAAAATTT 58.483 30.769 0.09 0.00 0.00 1.82
2846 3909 7.078249 AGATTTGACCCTGCCTTTTAAAATT 57.922 32.000 0.09 0.00 0.00 1.82
2847 3910 6.572314 CGAGATTTGACCCTGCCTTTTAAAAT 60.572 38.462 0.09 0.00 0.00 1.82
2848 3911 5.278758 CGAGATTTGACCCTGCCTTTTAAAA 60.279 40.000 0.00 0.00 0.00 1.52
2849 3912 4.217550 CGAGATTTGACCCTGCCTTTTAAA 59.782 41.667 0.00 0.00 0.00 1.52
2850 3913 3.756434 CGAGATTTGACCCTGCCTTTTAA 59.244 43.478 0.00 0.00 0.00 1.52
2851 3914 3.008594 TCGAGATTTGACCCTGCCTTTTA 59.991 43.478 0.00 0.00 0.00 1.52
2852 3915 2.162681 CGAGATTTGACCCTGCCTTTT 58.837 47.619 0.00 0.00 0.00 2.27
2853 3916 1.351017 TCGAGATTTGACCCTGCCTTT 59.649 47.619 0.00 0.00 0.00 3.11
2854 3917 0.984230 TCGAGATTTGACCCTGCCTT 59.016 50.000 0.00 0.00 0.00 4.35
2855 3918 1.139853 GATCGAGATTTGACCCTGCCT 59.860 52.381 0.00 0.00 0.00 4.75
2856 3919 1.134401 TGATCGAGATTTGACCCTGCC 60.134 52.381 0.00 0.00 0.00 4.85
2857 3920 2.315925 TGATCGAGATTTGACCCTGC 57.684 50.000 0.00 0.00 0.00 4.85
2858 3921 3.866651 ACTTGATCGAGATTTGACCCTG 58.133 45.455 17.27 0.00 0.00 4.45
2859 3922 4.559862 AACTTGATCGAGATTTGACCCT 57.440 40.909 17.27 0.00 0.00 4.34
2860 3923 5.048713 ACAAAACTTGATCGAGATTTGACCC 60.049 40.000 34.86 0.00 40.05 4.46
2861 3924 6.002062 ACAAAACTTGATCGAGATTTGACC 57.998 37.500 34.86 0.00 40.05 4.02
2862 3925 9.445786 TTTTACAAAACTTGATCGAGATTTGAC 57.554 29.630 34.86 0.00 40.05 3.18
2865 3928 9.463443 CCTTTTTACAAAACTTGATCGAGATTT 57.537 29.630 17.27 14.05 0.00 2.17
2866 3929 8.630037 ACCTTTTTACAAAACTTGATCGAGATT 58.370 29.630 17.27 8.33 0.00 2.40
2867 3930 8.166422 ACCTTTTTACAAAACTTGATCGAGAT 57.834 30.769 17.27 1.37 0.00 2.75
2868 3931 7.281324 TGACCTTTTTACAAAACTTGATCGAGA 59.719 33.333 17.27 0.00 0.00 4.04
2869 3932 7.414436 TGACCTTTTTACAAAACTTGATCGAG 58.586 34.615 8.54 8.54 0.00 4.04
2870 3933 7.323049 TGACCTTTTTACAAAACTTGATCGA 57.677 32.000 0.00 0.00 0.00 3.59
2871 3934 7.979115 TTGACCTTTTTACAAAACTTGATCG 57.021 32.000 0.00 0.00 0.00 3.69
2883 3946 9.631639 CGAATTTTCATGTTTTGACCTTTTTAC 57.368 29.630 0.00 0.00 32.84 2.01
2884 3947 8.331742 GCGAATTTTCATGTTTTGACCTTTTTA 58.668 29.630 0.00 0.00 32.84 1.52
2885 3948 7.186128 GCGAATTTTCATGTTTTGACCTTTTT 58.814 30.769 0.00 0.00 32.84 1.94
2886 3949 6.238347 GGCGAATTTTCATGTTTTGACCTTTT 60.238 34.615 0.00 0.00 32.84 2.27
2887 3950 5.236263 GGCGAATTTTCATGTTTTGACCTTT 59.764 36.000 0.00 0.00 32.84 3.11
2888 3951 4.749598 GGCGAATTTTCATGTTTTGACCTT 59.250 37.500 0.00 0.00 32.84 3.50
2889 3952 4.039124 AGGCGAATTTTCATGTTTTGACCT 59.961 37.500 0.00 0.00 32.84 3.85
2890 3953 4.306600 AGGCGAATTTTCATGTTTTGACC 58.693 39.130 0.00 0.00 32.84 4.02
2891 3954 4.385748 GGAGGCGAATTTTCATGTTTTGAC 59.614 41.667 0.00 0.00 32.84 3.18
2892 3955 4.555262 GGAGGCGAATTTTCATGTTTTGA 58.445 39.130 0.00 0.00 0.00 2.69
2893 3956 3.679502 GGGAGGCGAATTTTCATGTTTTG 59.320 43.478 0.00 0.00 0.00 2.44
2894 3957 3.323403 TGGGAGGCGAATTTTCATGTTTT 59.677 39.130 0.00 0.00 0.00 2.43
2895 3958 2.896685 TGGGAGGCGAATTTTCATGTTT 59.103 40.909 0.00 0.00 0.00 2.83
2896 3959 2.493278 CTGGGAGGCGAATTTTCATGTT 59.507 45.455 0.00 0.00 0.00 2.71
2897 3960 2.094675 CTGGGAGGCGAATTTTCATGT 58.905 47.619 0.00 0.00 0.00 3.21
2898 3961 1.202336 GCTGGGAGGCGAATTTTCATG 60.202 52.381 0.00 0.00 0.00 3.07
2899 3962 1.106285 GCTGGGAGGCGAATTTTCAT 58.894 50.000 0.00 0.00 0.00 2.57
2900 3963 2.566824 GCTGGGAGGCGAATTTTCA 58.433 52.632 0.00 0.00 0.00 2.69
2920 3983 2.898920 TAGTAGTGGACGAGGGGCGG 62.899 65.000 0.00 0.00 46.49 6.13
2922 3985 1.108132 CCTAGTAGTGGACGAGGGGC 61.108 65.000 0.00 0.00 44.94 5.80
2923 3986 3.112965 CCTAGTAGTGGACGAGGGG 57.887 63.158 0.00 0.00 44.94 4.79
2926 3989 3.130693 CCTTTTCCCTAGTAGTGGACGAG 59.869 52.174 6.83 7.66 0.00 4.18
2927 3990 3.094572 CCTTTTCCCTAGTAGTGGACGA 58.905 50.000 6.83 0.00 0.00 4.20
2928 3991 2.418334 GCCTTTTCCCTAGTAGTGGACG 60.418 54.545 6.83 0.00 0.00 4.79
2929 3992 2.838813 AGCCTTTTCCCTAGTAGTGGAC 59.161 50.000 6.83 0.00 0.00 4.02
2930 3993 3.200958 AGCCTTTTCCCTAGTAGTGGA 57.799 47.619 3.89 3.89 0.00 4.02
2931 3994 4.031611 AGTAGCCTTTTCCCTAGTAGTGG 58.968 47.826 0.00 0.00 0.00 4.00
2932 3995 4.141914 CCAGTAGCCTTTTCCCTAGTAGTG 60.142 50.000 0.00 0.00 0.00 2.74
2933 3996 4.031611 CCAGTAGCCTTTTCCCTAGTAGT 58.968 47.826 0.00 0.00 0.00 2.73
2934 3997 4.031611 ACCAGTAGCCTTTTCCCTAGTAG 58.968 47.826 0.00 0.00 0.00 2.57
2935 3998 4.070681 ACCAGTAGCCTTTTCCCTAGTA 57.929 45.455 0.00 0.00 0.00 1.82
2936 3999 2.917205 ACCAGTAGCCTTTTCCCTAGT 58.083 47.619 0.00 0.00 0.00 2.57
2937 4000 4.674281 CTACCAGTAGCCTTTTCCCTAG 57.326 50.000 0.00 0.00 0.00 3.02
2949 4012 4.106197 CAGTTTTCTAGCGCTACCAGTAG 58.894 47.826 14.45 4.41 36.29 2.57
2950 4013 3.119245 CCAGTTTTCTAGCGCTACCAGTA 60.119 47.826 14.45 0.00 0.00 2.74
2951 4014 2.353803 CCAGTTTTCTAGCGCTACCAGT 60.354 50.000 14.45 0.00 0.00 4.00
2952 4015 2.271800 CCAGTTTTCTAGCGCTACCAG 58.728 52.381 14.45 6.13 0.00 4.00
2953 4016 1.674817 GCCAGTTTTCTAGCGCTACCA 60.675 52.381 14.45 0.00 0.00 3.25
2954 4017 1.007580 GCCAGTTTTCTAGCGCTACC 58.992 55.000 14.45 0.00 0.00 3.18
2955 4018 2.011540 AGCCAGTTTTCTAGCGCTAC 57.988 50.000 14.45 6.03 39.43 3.58
2956 4019 2.758979 ACTAGCCAGTTTTCTAGCGCTA 59.241 45.455 17.75 17.75 39.43 4.26
2957 4020 1.550976 ACTAGCCAGTTTTCTAGCGCT 59.449 47.619 17.26 17.26 39.43 5.92
2958 4021 2.011540 ACTAGCCAGTTTTCTAGCGC 57.988 50.000 0.00 0.00 39.43 5.92
2959 4022 4.373348 ACTACTAGCCAGTTTTCTAGCG 57.627 45.455 0.00 0.00 39.43 4.26
2960 4023 5.283294 GCTACTACTAGCCAGTTTTCTAGC 58.717 45.833 3.14 2.88 39.79 3.42
2961 4024 5.512473 CGCTACTACTAGCCAGTTTTCTAG 58.488 45.833 3.14 0.00 42.36 2.43
2962 4025 4.201990 GCGCTACTACTAGCCAGTTTTCTA 60.202 45.833 0.00 0.00 42.36 2.10
2963 4026 3.429135 GCGCTACTACTAGCCAGTTTTCT 60.429 47.826 0.00 0.00 42.36 2.52
2964 4027 2.858941 GCGCTACTACTAGCCAGTTTTC 59.141 50.000 0.00 0.00 42.36 2.29
2965 4028 2.734492 CGCGCTACTACTAGCCAGTTTT 60.734 50.000 5.56 0.00 42.36 2.43
2966 4029 1.202268 CGCGCTACTACTAGCCAGTTT 60.202 52.381 5.56 0.00 42.36 2.66
2967 4030 0.381089 CGCGCTACTACTAGCCAGTT 59.619 55.000 5.56 0.00 42.36 3.16
2968 4031 1.445716 CCGCGCTACTACTAGCCAGT 61.446 60.000 5.56 3.34 42.36 4.00
2969 4032 1.283181 CCGCGCTACTACTAGCCAG 59.717 63.158 5.56 0.00 42.36 4.85
2970 4033 2.191513 CCCGCGCTACTACTAGCCA 61.192 63.158 5.56 0.00 42.36 4.75
2971 4034 1.732417 AACCCGCGCTACTACTAGCC 61.732 60.000 5.56 0.00 42.36 3.93
2972 4035 0.317687 GAACCCGCGCTACTACTAGC 60.318 60.000 5.56 0.00 41.97 3.42
2973 4036 0.310232 GGAACCCGCGCTACTACTAG 59.690 60.000 5.56 0.00 0.00 2.57
2974 4037 2.408333 GGAACCCGCGCTACTACTA 58.592 57.895 5.56 0.00 0.00 1.82
2975 4038 3.204418 GGAACCCGCGCTACTACT 58.796 61.111 5.56 0.00 0.00 2.57
2988 4051 1.399471 CGATAGTAGTAGCGCGGGAAC 60.399 57.143 8.83 0.00 30.07 3.62
2989 4052 0.870393 CGATAGTAGTAGCGCGGGAA 59.130 55.000 8.83 0.00 30.07 3.97
2990 4053 2.536725 CGATAGTAGTAGCGCGGGA 58.463 57.895 8.83 0.00 30.07 5.14
2996 4059 5.467902 AGTTATAGCGCGATAGTAGTAGC 57.532 43.478 12.10 0.00 39.35 3.58
2997 4060 9.475505 CTTTTAGTTATAGCGCGATAGTAGTAG 57.524 37.037 12.10 2.76 39.35 2.57
2998 4061 8.993121 ACTTTTAGTTATAGCGCGATAGTAGTA 58.007 33.333 12.10 4.57 39.35 1.82
2999 4062 7.869800 ACTTTTAGTTATAGCGCGATAGTAGT 58.130 34.615 12.10 5.66 39.35 2.73
3000 4063 8.725212 AACTTTTAGTTATAGCGCGATAGTAG 57.275 34.615 12.10 0.46 36.52 2.57
3001 4064 9.817365 CTAACTTTTAGTTATAGCGCGATAGTA 57.183 33.333 12.10 0.00 39.68 1.82
3002 4065 8.348507 ACTAACTTTTAGTTATAGCGCGATAGT 58.651 33.333 12.10 0.00 39.68 2.12
3003 4066 8.725212 ACTAACTTTTAGTTATAGCGCGATAG 57.275 34.615 12.10 0.00 39.68 2.08
3004 4067 9.817365 CTACTAACTTTTAGTTATAGCGCGATA 57.183 33.333 12.10 9.16 39.68 2.92
3005 4068 8.348507 ACTACTAACTTTTAGTTATAGCGCGAT 58.651 33.333 12.10 5.99 39.68 4.58
3006 4069 7.697691 ACTACTAACTTTTAGTTATAGCGCGA 58.302 34.615 12.10 0.00 39.68 5.87
3007 4070 7.905031 ACTACTAACTTTTAGTTATAGCGCG 57.095 36.000 0.00 0.00 39.68 6.86
3008 4071 8.900762 GCTACTACTAACTTTTAGTTATAGCGC 58.099 37.037 17.08 0.00 39.68 5.92
3009 4072 9.941664 TGCTACTACTAACTTTTAGTTATAGCG 57.058 33.333 21.61 4.75 42.58 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.