Multiple sequence alignment - TraesCS1D01G435500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G435500 chr1D 100.000 2114 0 0 1 2114 483923254 483921141 0.000000e+00 3904.0
1 TraesCS1D01G435500 chr1D 99.108 1457 8 3 663 2114 394179278 394180734 0.000000e+00 2614.0
2 TraesCS1D01G435500 chr1D 95.542 1458 53 7 663 2114 244444412 244445863 0.000000e+00 2322.0
3 TraesCS1D01G435500 chr1D 99.510 204 1 0 1 204 483915004 483915207 2.560000e-99 372.0
4 TraesCS1D01G435500 chr1D 98.286 175 3 0 1 175 43971285 43971111 7.330000e-80 307.0
5 TraesCS1D01G435500 chr1D 97.143 175 5 0 1 175 214585482 214585308 1.590000e-76 296.0
6 TraesCS1D01G435500 chr6D 99.243 1453 9 2 663 2114 431400392 431401843 0.000000e+00 2621.0
7 TraesCS1D01G435500 chr6D 99.005 1307 11 2 810 2114 431403702 431402396 0.000000e+00 2340.0
8 TraesCS1D01G435500 chr6D 97.143 175 5 0 1 175 345143627 345143801 1.590000e-76 296.0
9 TraesCS1D01G435500 chrUn 99.107 1455 9 3 663 2114 317472822 317471369 0.000000e+00 2612.0
10 TraesCS1D01G435500 chrUn 99.127 458 4 0 203 660 371790571 371790114 0.000000e+00 824.0
11 TraesCS1D01G435500 chrUn 97.143 175 5 0 1 175 57150294 57150120 1.590000e-76 296.0
12 TraesCS1D01G435500 chrUn 97.143 175 5 0 1 175 312145161 312145335 1.590000e-76 296.0
13 TraesCS1D01G435500 chr5D 98.692 1453 16 3 663 2114 6207456 6206006 0.000000e+00 2575.0
14 TraesCS1D01G435500 chr5D 99.031 1341 8 4 776 2114 554200522 554199185 0.000000e+00 2399.0
15 TraesCS1D01G435500 chr5D 98.253 458 7 1 203 660 432406897 432407353 0.000000e+00 800.0
16 TraesCS1D01G435500 chr5D 97.143 175 5 0 1 175 71499189 71499015 1.590000e-76 296.0
17 TraesCS1D01G435500 chr5D 97.143 175 5 0 1 175 119203813 119203987 1.590000e-76 296.0
18 TraesCS1D01G435500 chr3B 98.417 1453 21 2 663 2114 201506943 201508394 0.000000e+00 2555.0
19 TraesCS1D01G435500 chr3B 98.690 458 6 0 203 660 201555267 201555724 0.000000e+00 813.0
20 TraesCS1D01G435500 chr2D 97.387 1454 28 7 663 2114 334226286 334227731 0.000000e+00 2466.0
21 TraesCS1D01G435500 chr2D 98.611 216 2 1 663 878 37532584 37532370 4.260000e-102 381.0
22 TraesCS1D01G435500 chr2D 99.487 195 0 1 663 857 506328277 506328470 9.280000e-94 353.0
23 TraesCS1D01G435500 chr2D 92.500 80 2 4 646 725 66205040 66204965 6.170000e-21 111.0
24 TraesCS1D01G435500 chr3D 99.345 458 3 0 203 660 158931025 158930568 0.000000e+00 830.0
25 TraesCS1D01G435500 chr3D 99.345 458 3 0 203 660 158937140 158936683 0.000000e+00 830.0
26 TraesCS1D01G435500 chr3D 99.345 458 3 0 203 660 589248369 589247912 0.000000e+00 830.0
27 TraesCS1D01G435500 chr3D 98.472 458 7 0 203 660 76788343 76787886 0.000000e+00 808.0
28 TraesCS1D01G435500 chr3D 97.688 173 4 0 3 175 349506487 349506315 4.410000e-77 298.0
29 TraesCS1D01G435500 chr5A 98.908 458 5 0 203 660 482023856 482024313 0.000000e+00 819.0
30 TraesCS1D01G435500 chr4A 97.168 459 12 1 203 660 219304492 219304950 0.000000e+00 774.0
31 TraesCS1D01G435500 chr4A 100.000 30 0 0 172 201 314584652 314584681 2.930000e-04 56.5
32 TraesCS1D01G435500 chr2B 95.283 106 4 1 722 827 357437614 357437510 1.300000e-37 167.0
33 TraesCS1D01G435500 chr2B 100.000 57 0 0 856 912 245322588 245322644 2.870000e-19 106.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G435500 chr1D 483921141 483923254 2113 True 3904 3904 100.000 1 2114 1 chr1D.!!$R3 2113
1 TraesCS1D01G435500 chr1D 394179278 394180734 1456 False 2614 2614 99.108 663 2114 1 chr1D.!!$F2 1451
2 TraesCS1D01G435500 chr1D 244444412 244445863 1451 False 2322 2322 95.542 663 2114 1 chr1D.!!$F1 1451
3 TraesCS1D01G435500 chr6D 431400392 431401843 1451 False 2621 2621 99.243 663 2114 1 chr6D.!!$F2 1451
4 TraesCS1D01G435500 chr6D 431402396 431403702 1306 True 2340 2340 99.005 810 2114 1 chr6D.!!$R1 1304
5 TraesCS1D01G435500 chrUn 317471369 317472822 1453 True 2612 2612 99.107 663 2114 1 chrUn.!!$R2 1451
6 TraesCS1D01G435500 chr5D 6206006 6207456 1450 True 2575 2575 98.692 663 2114 1 chr5D.!!$R1 1451
7 TraesCS1D01G435500 chr5D 554199185 554200522 1337 True 2399 2399 99.031 776 2114 1 chr5D.!!$R3 1338
8 TraesCS1D01G435500 chr3B 201506943 201508394 1451 False 2555 2555 98.417 663 2114 1 chr3B.!!$F1 1451
9 TraesCS1D01G435500 chr2D 334226286 334227731 1445 False 2466 2466 97.387 663 2114 1 chr2D.!!$F1 1451

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
114 115 0.034059 CATCCTCGGTATGGTGGCTC 59.966 60.0 0.0 0.0 0.0 4.7 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1871 1887 1.406539 CCCGCATTGAAAATCCTCCTG 59.593 52.381 0.0 0.0 0.0 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.772287 CCCTTAAGATGAATCTCGCCC 58.228 52.381 3.36 0.00 35.76 6.13
21 22 2.370189 CCCTTAAGATGAATCTCGCCCT 59.630 50.000 3.36 0.00 35.76 5.19
22 23 3.556004 CCCTTAAGATGAATCTCGCCCTC 60.556 52.174 3.36 0.00 35.76 4.30
23 24 3.312828 CTTAAGATGAATCTCGCCCTCG 58.687 50.000 0.00 0.00 35.76 4.63
24 25 1.403814 AAGATGAATCTCGCCCTCGA 58.596 50.000 0.00 0.00 43.28 4.04
32 33 3.217017 TCGCCCTCGAGATTCGGG 61.217 66.667 15.71 8.33 40.73 5.14
33 34 3.528370 CGCCCTCGAGATTCGGGT 61.528 66.667 15.71 0.00 39.06 5.28
34 35 2.901042 GCCCTCGAGATTCGGGTT 59.099 61.111 15.71 0.00 39.06 4.11
35 36 1.521681 GCCCTCGAGATTCGGGTTG 60.522 63.158 15.71 0.00 39.06 3.77
36 37 1.144057 CCCTCGAGATTCGGGTTGG 59.856 63.158 15.71 0.00 39.06 3.77
37 38 1.521681 CCTCGAGATTCGGGTTGGC 60.522 63.158 15.71 0.00 39.06 4.52
38 39 1.517832 CTCGAGATTCGGGTTGGCT 59.482 57.895 6.58 0.00 40.88 4.75
39 40 0.744874 CTCGAGATTCGGGTTGGCTA 59.255 55.000 6.58 0.00 40.88 3.93
40 41 0.744874 TCGAGATTCGGGTTGGCTAG 59.255 55.000 0.00 0.00 40.88 3.42
41 42 0.744874 CGAGATTCGGGTTGGCTAGA 59.255 55.000 0.00 0.00 36.00 2.43
42 43 1.136305 CGAGATTCGGGTTGGCTAGAA 59.864 52.381 0.00 0.00 36.00 2.10
43 44 2.418197 CGAGATTCGGGTTGGCTAGAAA 60.418 50.000 0.00 0.00 36.00 2.52
44 45 3.606687 GAGATTCGGGTTGGCTAGAAAA 58.393 45.455 0.00 0.00 0.00 2.29
45 46 4.200092 GAGATTCGGGTTGGCTAGAAAAT 58.800 43.478 0.00 0.00 0.00 1.82
46 47 5.365619 GAGATTCGGGTTGGCTAGAAAATA 58.634 41.667 0.00 0.00 0.00 1.40
47 48 5.368989 AGATTCGGGTTGGCTAGAAAATAG 58.631 41.667 0.00 0.00 0.00 1.73
48 49 3.553828 TCGGGTTGGCTAGAAAATAGG 57.446 47.619 0.00 0.00 0.00 2.57
49 50 2.841881 TCGGGTTGGCTAGAAAATAGGT 59.158 45.455 0.00 0.00 0.00 3.08
50 51 2.943033 CGGGTTGGCTAGAAAATAGGTG 59.057 50.000 0.00 0.00 0.00 4.00
51 52 3.370103 CGGGTTGGCTAGAAAATAGGTGA 60.370 47.826 0.00 0.00 0.00 4.02
52 53 4.200092 GGGTTGGCTAGAAAATAGGTGAG 58.800 47.826 0.00 0.00 0.00 3.51
53 54 4.200092 GGTTGGCTAGAAAATAGGTGAGG 58.800 47.826 0.00 0.00 0.00 3.86
54 55 4.200092 GTTGGCTAGAAAATAGGTGAGGG 58.800 47.826 0.00 0.00 0.00 4.30
55 56 3.460825 TGGCTAGAAAATAGGTGAGGGT 58.539 45.455 0.00 0.00 0.00 4.34
56 57 3.199946 TGGCTAGAAAATAGGTGAGGGTG 59.800 47.826 0.00 0.00 0.00 4.61
57 58 3.454812 GGCTAGAAAATAGGTGAGGGTGA 59.545 47.826 0.00 0.00 0.00 4.02
58 59 4.103311 GGCTAGAAAATAGGTGAGGGTGAT 59.897 45.833 0.00 0.00 0.00 3.06
59 60 5.301555 GCTAGAAAATAGGTGAGGGTGATC 58.698 45.833 0.00 0.00 0.00 2.92
60 61 4.779993 AGAAAATAGGTGAGGGTGATCC 57.220 45.455 0.00 0.00 0.00 3.36
70 71 2.897823 AGGGTGATCCTTCCATAGGT 57.102 50.000 0.00 0.00 45.47 3.08
71 72 2.695585 AGGGTGATCCTTCCATAGGTC 58.304 52.381 0.00 0.00 45.47 3.85
72 73 2.251338 AGGGTGATCCTTCCATAGGTCT 59.749 50.000 0.00 0.00 45.47 3.85
73 74 3.049344 GGGTGATCCTTCCATAGGTCTT 58.951 50.000 0.00 0.00 45.03 3.01
74 75 3.071747 GGGTGATCCTTCCATAGGTCTTC 59.928 52.174 0.00 0.00 45.03 2.87
75 76 3.071747 GGTGATCCTTCCATAGGTCTTCC 59.928 52.174 0.00 0.00 45.03 3.46
76 77 3.970640 GTGATCCTTCCATAGGTCTTCCT 59.029 47.826 0.00 0.00 45.03 3.36
77 78 4.039852 GTGATCCTTCCATAGGTCTTCCTC 59.960 50.000 0.00 0.00 45.03 3.71
78 79 4.078336 TGATCCTTCCATAGGTCTTCCTCT 60.078 45.833 0.00 0.00 45.03 3.69
79 80 3.917300 TCCTTCCATAGGTCTTCCTCTC 58.083 50.000 0.00 0.00 45.03 3.20
80 81 2.625790 CCTTCCATAGGTCTTCCTCTCG 59.374 54.545 0.00 0.00 43.94 4.04
81 82 3.292460 CTTCCATAGGTCTTCCTCTCGT 58.708 50.000 0.00 0.00 43.94 4.18
82 83 3.383698 TCCATAGGTCTTCCTCTCGTT 57.616 47.619 0.00 0.00 43.94 3.85
83 84 3.288964 TCCATAGGTCTTCCTCTCGTTC 58.711 50.000 0.00 0.00 43.94 3.95
84 85 2.362717 CCATAGGTCTTCCTCTCGTTCC 59.637 54.545 0.00 0.00 43.94 3.62
85 86 3.292460 CATAGGTCTTCCTCTCGTTCCT 58.708 50.000 0.00 0.00 43.94 3.36
86 87 4.462133 CATAGGTCTTCCTCTCGTTCCTA 58.538 47.826 0.00 0.00 43.94 2.94
87 88 3.007473 AGGTCTTCCTCTCGTTCCTAG 57.993 52.381 0.00 0.00 40.58 3.02
88 89 2.025898 GGTCTTCCTCTCGTTCCTAGG 58.974 57.143 0.82 0.82 0.00 3.02
89 90 2.621147 GGTCTTCCTCTCGTTCCTAGGT 60.621 54.545 9.08 0.00 0.00 3.08
90 91 2.424246 GTCTTCCTCTCGTTCCTAGGTG 59.576 54.545 9.08 0.15 0.00 4.00
91 92 1.751924 CTTCCTCTCGTTCCTAGGTGG 59.248 57.143 9.08 0.00 37.10 4.61
92 93 0.683504 TCCTCTCGTTCCTAGGTGGC 60.684 60.000 9.08 0.00 35.26 5.01
93 94 0.684805 CCTCTCGTTCCTAGGTGGCT 60.685 60.000 9.08 0.00 35.26 4.75
94 95 1.187087 CTCTCGTTCCTAGGTGGCTT 58.813 55.000 9.08 0.00 35.26 4.35
95 96 1.135333 CTCTCGTTCCTAGGTGGCTTC 59.865 57.143 9.08 0.00 35.26 3.86
96 97 0.895530 CTCGTTCCTAGGTGGCTTCA 59.104 55.000 9.08 0.00 35.26 3.02
97 98 1.482593 CTCGTTCCTAGGTGGCTTCAT 59.517 52.381 9.08 0.00 35.26 2.57
98 99 1.480954 TCGTTCCTAGGTGGCTTCATC 59.519 52.381 9.08 0.00 35.26 2.92
99 100 1.473434 CGTTCCTAGGTGGCTTCATCC 60.473 57.143 9.08 0.00 35.26 3.51
100 101 1.840635 GTTCCTAGGTGGCTTCATCCT 59.159 52.381 9.08 0.00 35.26 3.24
101 102 1.794714 TCCTAGGTGGCTTCATCCTC 58.205 55.000 9.08 0.00 35.26 3.71
102 103 0.390860 CCTAGGTGGCTTCATCCTCG 59.609 60.000 0.00 0.00 33.34 4.63
103 104 0.390860 CTAGGTGGCTTCATCCTCGG 59.609 60.000 0.00 0.00 33.34 4.63
104 105 0.325296 TAGGTGGCTTCATCCTCGGT 60.325 55.000 0.00 0.00 33.34 4.69
105 106 0.325296 AGGTGGCTTCATCCTCGGTA 60.325 55.000 0.00 0.00 0.00 4.02
106 107 0.759346 GGTGGCTTCATCCTCGGTAT 59.241 55.000 0.00 0.00 0.00 2.73
107 108 1.541233 GGTGGCTTCATCCTCGGTATG 60.541 57.143 0.00 0.00 0.00 2.39
108 109 0.758734 TGGCTTCATCCTCGGTATGG 59.241 55.000 0.00 0.00 0.00 2.74
109 110 0.759346 GGCTTCATCCTCGGTATGGT 59.241 55.000 0.00 0.00 0.00 3.55
110 111 1.541233 GGCTTCATCCTCGGTATGGTG 60.541 57.143 0.00 0.00 0.00 4.17
111 112 1.541233 GCTTCATCCTCGGTATGGTGG 60.541 57.143 0.00 0.00 0.00 4.61
112 113 0.468226 TTCATCCTCGGTATGGTGGC 59.532 55.000 0.00 0.00 0.00 5.01
113 114 0.398522 TCATCCTCGGTATGGTGGCT 60.399 55.000 0.00 0.00 0.00 4.75
114 115 0.034059 CATCCTCGGTATGGTGGCTC 59.966 60.000 0.00 0.00 0.00 4.70
115 116 1.122019 ATCCTCGGTATGGTGGCTCC 61.122 60.000 0.00 0.00 0.00 4.70
123 124 3.986054 TGGTGGCTCCACTGAACT 58.014 55.556 17.57 0.00 45.52 3.01
124 125 2.230664 TGGTGGCTCCACTGAACTT 58.769 52.632 17.57 0.00 45.52 2.66
125 126 0.550914 TGGTGGCTCCACTGAACTTT 59.449 50.000 17.57 0.00 45.52 2.66
126 127 0.954452 GGTGGCTCCACTGAACTTTG 59.046 55.000 17.57 0.00 45.52 2.77
127 128 0.312102 GTGGCTCCACTGAACTTTGC 59.688 55.000 11.61 0.00 43.12 3.68
128 129 0.106769 TGGCTCCACTGAACTTTGCA 60.107 50.000 0.00 0.00 0.00 4.08
129 130 0.595095 GGCTCCACTGAACTTTGCAG 59.405 55.000 0.00 0.00 39.26 4.41
130 131 1.597742 GCTCCACTGAACTTTGCAGA 58.402 50.000 0.00 0.00 36.86 4.26
131 132 1.949525 GCTCCACTGAACTTTGCAGAA 59.050 47.619 0.00 0.00 36.86 3.02
132 133 2.287248 GCTCCACTGAACTTTGCAGAAC 60.287 50.000 0.00 0.00 36.86 3.01
133 134 3.209410 CTCCACTGAACTTTGCAGAACT 58.791 45.455 0.00 0.00 36.86 3.01
134 135 3.620488 TCCACTGAACTTTGCAGAACTT 58.380 40.909 0.00 0.00 36.86 2.66
135 136 3.378112 TCCACTGAACTTTGCAGAACTTG 59.622 43.478 0.00 0.00 36.86 3.16
136 137 3.378112 CCACTGAACTTTGCAGAACTTGA 59.622 43.478 0.00 0.00 36.86 3.02
137 138 4.037208 CCACTGAACTTTGCAGAACTTGAT 59.963 41.667 0.00 0.00 36.86 2.57
138 139 5.239306 CCACTGAACTTTGCAGAACTTGATA 59.761 40.000 0.00 0.00 36.86 2.15
139 140 6.238731 CCACTGAACTTTGCAGAACTTGATAA 60.239 38.462 0.00 0.00 36.86 1.75
140 141 6.634436 CACTGAACTTTGCAGAACTTGATAAC 59.366 38.462 0.00 0.00 36.86 1.89
141 142 6.072112 TGAACTTTGCAGAACTTGATAACC 57.928 37.500 0.00 0.00 0.00 2.85
142 143 5.827797 TGAACTTTGCAGAACTTGATAACCT 59.172 36.000 0.00 0.00 0.00 3.50
143 144 6.321181 TGAACTTTGCAGAACTTGATAACCTT 59.679 34.615 0.00 0.00 0.00 3.50
144 145 6.076981 ACTTTGCAGAACTTGATAACCTTG 57.923 37.500 0.00 0.00 0.00 3.61
145 146 5.594317 ACTTTGCAGAACTTGATAACCTTGT 59.406 36.000 0.00 0.00 0.00 3.16
146 147 6.096846 ACTTTGCAGAACTTGATAACCTTGTT 59.903 34.615 0.00 0.00 0.00 2.83
147 148 5.437289 TGCAGAACTTGATAACCTTGTTG 57.563 39.130 0.00 0.00 0.00 3.33
148 149 4.229876 GCAGAACTTGATAACCTTGTTGC 58.770 43.478 0.00 0.00 0.00 4.17
149 150 4.466828 CAGAACTTGATAACCTTGTTGCG 58.533 43.478 0.00 0.00 0.00 4.85
150 151 4.024048 CAGAACTTGATAACCTTGTTGCGT 60.024 41.667 0.00 0.00 0.00 5.24
151 152 3.896648 ACTTGATAACCTTGTTGCGTG 57.103 42.857 0.00 0.00 0.00 5.34
152 153 3.211045 ACTTGATAACCTTGTTGCGTGT 58.789 40.909 0.00 0.00 0.00 4.49
153 154 4.382291 ACTTGATAACCTTGTTGCGTGTA 58.618 39.130 0.00 0.00 0.00 2.90
154 155 4.817464 ACTTGATAACCTTGTTGCGTGTAA 59.183 37.500 0.00 0.00 0.00 2.41
155 156 4.735662 TGATAACCTTGTTGCGTGTAAC 57.264 40.909 0.00 0.00 0.00 2.50
156 157 4.382291 TGATAACCTTGTTGCGTGTAACT 58.618 39.130 2.63 0.00 31.75 2.24
157 158 4.449743 TGATAACCTTGTTGCGTGTAACTC 59.550 41.667 2.63 0.00 31.75 3.01
158 159 1.214367 ACCTTGTTGCGTGTAACTCG 58.786 50.000 2.63 0.00 31.75 4.18
159 160 0.511221 CCTTGTTGCGTGTAACTCGG 59.489 55.000 2.63 0.00 31.75 4.63
160 161 0.110823 CTTGTTGCGTGTAACTCGGC 60.111 55.000 2.63 0.00 31.75 5.54
161 162 0.531090 TTGTTGCGTGTAACTCGGCT 60.531 50.000 2.63 0.00 31.75 5.52
162 163 1.218875 TGTTGCGTGTAACTCGGCTG 61.219 55.000 2.63 0.00 31.75 4.85
163 164 1.666553 TTGCGTGTAACTCGGCTGG 60.667 57.895 0.00 0.00 31.75 4.85
164 165 3.488090 GCGTGTAACTCGGCTGGC 61.488 66.667 0.00 0.00 31.75 4.85
165 166 2.048597 CGTGTAACTCGGCTGGCA 60.049 61.111 1.08 0.00 31.75 4.92
166 167 1.666553 CGTGTAACTCGGCTGGCAA 60.667 57.895 1.08 0.00 31.75 4.52
167 168 1.225376 CGTGTAACTCGGCTGGCAAA 61.225 55.000 1.08 0.00 31.75 3.68
168 169 0.237498 GTGTAACTCGGCTGGCAAAC 59.763 55.000 1.08 0.00 0.00 2.93
169 170 0.107831 TGTAACTCGGCTGGCAAACT 59.892 50.000 1.08 0.00 0.00 2.66
170 171 0.796927 GTAACTCGGCTGGCAAACTC 59.203 55.000 1.08 0.00 0.00 3.01
171 172 0.669318 TAACTCGGCTGGCAAACTCG 60.669 55.000 1.08 0.00 0.00 4.18
172 173 2.048222 CTCGGCTGGCAAACTCGA 60.048 61.111 1.08 0.00 0.00 4.04
173 174 2.048222 TCGGCTGGCAAACTCGAG 60.048 61.111 11.84 11.84 0.00 4.04
174 175 2.048222 CGGCTGGCAAACTCGAGA 60.048 61.111 21.68 0.00 0.00 4.04
175 176 1.448540 CGGCTGGCAAACTCGAGAT 60.449 57.895 21.68 3.75 0.00 2.75
176 177 0.179111 CGGCTGGCAAACTCGAGATA 60.179 55.000 21.68 0.00 0.00 1.98
177 178 1.291132 GGCTGGCAAACTCGAGATAC 58.709 55.000 21.68 3.10 0.00 2.24
178 179 1.405526 GGCTGGCAAACTCGAGATACA 60.406 52.381 21.68 9.36 0.00 2.29
179 180 1.929836 GCTGGCAAACTCGAGATACAG 59.070 52.381 21.68 18.47 0.00 2.74
180 181 2.675317 GCTGGCAAACTCGAGATACAGT 60.675 50.000 21.68 0.00 0.00 3.55
181 182 2.926200 CTGGCAAACTCGAGATACAGTG 59.074 50.000 21.68 3.41 0.00 3.66
182 183 1.661112 GGCAAACTCGAGATACAGTGC 59.339 52.381 21.68 13.71 0.00 4.40
183 184 1.661112 GCAAACTCGAGATACAGTGCC 59.339 52.381 21.68 0.00 0.00 5.01
184 185 2.930887 GCAAACTCGAGATACAGTGCCA 60.931 50.000 21.68 0.00 0.00 4.92
185 186 2.656560 AACTCGAGATACAGTGCCAC 57.343 50.000 21.68 0.00 0.00 5.01
186 187 1.840737 ACTCGAGATACAGTGCCACT 58.159 50.000 21.68 0.00 0.00 4.00
197 198 2.898705 CAGTGCCACTGGAAGAGATAC 58.101 52.381 17.22 0.00 42.35 2.24
198 199 2.234661 CAGTGCCACTGGAAGAGATACA 59.765 50.000 17.22 0.00 42.35 2.29
199 200 2.499289 AGTGCCACTGGAAGAGATACAG 59.501 50.000 0.00 0.00 46.40 2.74
204 205 2.611225 CTGGAAGAGATACAGTGCCC 57.389 55.000 0.00 0.00 35.02 5.36
205 206 1.139853 CTGGAAGAGATACAGTGCCCC 59.860 57.143 0.00 0.00 35.02 5.80
206 207 1.273838 TGGAAGAGATACAGTGCCCCT 60.274 52.381 0.00 0.00 0.00 4.79
207 208 1.840635 GGAAGAGATACAGTGCCCCTT 59.159 52.381 0.00 0.00 0.00 3.95
208 209 3.039011 GGAAGAGATACAGTGCCCCTTA 58.961 50.000 0.00 0.00 0.00 2.69
209 210 3.648545 GGAAGAGATACAGTGCCCCTTAT 59.351 47.826 0.00 0.00 0.00 1.73
210 211 4.503991 GGAAGAGATACAGTGCCCCTTATG 60.504 50.000 0.00 0.00 0.00 1.90
211 212 2.370189 AGAGATACAGTGCCCCTTATGC 59.630 50.000 0.00 0.00 0.00 3.14
212 213 2.370189 GAGATACAGTGCCCCTTATGCT 59.630 50.000 0.00 0.00 0.00 3.79
213 214 3.578716 GAGATACAGTGCCCCTTATGCTA 59.421 47.826 0.00 0.00 0.00 3.49
214 215 4.171234 AGATACAGTGCCCCTTATGCTAT 58.829 43.478 0.00 0.00 0.00 2.97
215 216 4.599241 AGATACAGTGCCCCTTATGCTATT 59.401 41.667 0.00 0.00 0.00 1.73
216 217 3.669939 ACAGTGCCCCTTATGCTATTT 57.330 42.857 0.00 0.00 0.00 1.40
217 218 3.290710 ACAGTGCCCCTTATGCTATTTG 58.709 45.455 0.00 0.00 0.00 2.32
218 219 2.035066 CAGTGCCCCTTATGCTATTTGC 59.965 50.000 0.00 0.00 43.25 3.68
270 271 9.856488 ATCTCTTTCTCAATGATTTCAATTGTG 57.144 29.630 5.13 0.00 0.00 3.33
271 272 9.070179 TCTCTTTCTCAATGATTTCAATTGTGA 57.930 29.630 5.13 0.00 0.00 3.58
272 273 9.856488 CTCTTTCTCAATGATTTCAATTGTGAT 57.144 29.630 5.13 0.73 32.48 3.06
276 277 9.558648 TTCTCAATGATTTCAATTGTGATTACG 57.441 29.630 5.13 0.00 32.48 3.18
277 278 8.945057 TCTCAATGATTTCAATTGTGATTACGA 58.055 29.630 5.13 0.00 32.48 3.43
278 279 9.726232 CTCAATGATTTCAATTGTGATTACGAT 57.274 29.630 5.13 0.00 32.48 3.73
319 320 4.923264 GTTCGTGAACTTGGAGGATTAC 57.077 45.455 5.51 0.00 38.25 1.89
320 321 4.312443 GTTCGTGAACTTGGAGGATTACA 58.688 43.478 5.51 0.00 38.25 2.41
321 322 4.819105 TCGTGAACTTGGAGGATTACAT 57.181 40.909 0.00 0.00 0.00 2.29
322 323 4.503910 TCGTGAACTTGGAGGATTACATG 58.496 43.478 0.00 0.00 0.00 3.21
323 324 4.221924 TCGTGAACTTGGAGGATTACATGA 59.778 41.667 0.00 0.00 0.00 3.07
324 325 5.104941 TCGTGAACTTGGAGGATTACATGAT 60.105 40.000 0.00 0.00 0.00 2.45
325 326 5.586243 CGTGAACTTGGAGGATTACATGATT 59.414 40.000 0.00 0.00 0.00 2.57
326 327 6.238211 CGTGAACTTGGAGGATTACATGATTC 60.238 42.308 0.00 0.00 0.00 2.52
327 328 5.817296 TGAACTTGGAGGATTACATGATTCG 59.183 40.000 0.00 0.00 0.00 3.34
328 329 5.359194 ACTTGGAGGATTACATGATTCGT 57.641 39.130 0.00 0.00 0.00 3.85
329 330 5.360591 ACTTGGAGGATTACATGATTCGTC 58.639 41.667 0.00 4.28 0.00 4.20
330 331 5.104941 ACTTGGAGGATTACATGATTCGTCA 60.105 40.000 0.00 0.00 0.00 4.35
331 332 4.948847 TGGAGGATTACATGATTCGTCAG 58.051 43.478 0.00 0.00 0.00 3.51
332 333 4.649218 TGGAGGATTACATGATTCGTCAGA 59.351 41.667 0.00 0.00 0.00 3.27
333 334 5.128663 TGGAGGATTACATGATTCGTCAGAA 59.871 40.000 0.00 0.00 41.13 3.02
334 335 6.049149 GGAGGATTACATGATTCGTCAGAAA 58.951 40.000 0.00 0.00 40.15 2.52
335 336 6.538742 GGAGGATTACATGATTCGTCAGAAAA 59.461 38.462 0.00 0.00 40.15 2.29
336 337 7.065803 GGAGGATTACATGATTCGTCAGAAAAA 59.934 37.037 0.00 0.00 40.15 1.94
337 338 7.978982 AGGATTACATGATTCGTCAGAAAAAG 58.021 34.615 0.00 0.00 40.15 2.27
338 339 7.066284 AGGATTACATGATTCGTCAGAAAAAGG 59.934 37.037 0.00 0.00 40.15 3.11
339 340 7.065803 GGATTACATGATTCGTCAGAAAAAGGA 59.934 37.037 0.00 0.00 40.15 3.36
340 341 7.737972 TTACATGATTCGTCAGAAAAAGGAA 57.262 32.000 0.00 0.00 40.15 3.36
341 342 6.824305 ACATGATTCGTCAGAAAAAGGAAT 57.176 33.333 0.00 0.00 40.15 3.01
342 343 6.615088 ACATGATTCGTCAGAAAAAGGAATG 58.385 36.000 0.00 0.00 40.15 2.67
343 344 6.430925 ACATGATTCGTCAGAAAAAGGAATGA 59.569 34.615 0.00 0.00 40.15 2.57
344 345 7.121759 ACATGATTCGTCAGAAAAAGGAATGAT 59.878 33.333 0.00 0.00 40.15 2.45
345 346 8.615211 CATGATTCGTCAGAAAAAGGAATGATA 58.385 33.333 0.00 0.00 40.15 2.15
346 347 8.201554 TGATTCGTCAGAAAAAGGAATGATAG 57.798 34.615 0.00 0.00 40.15 2.08
347 348 7.824289 TGATTCGTCAGAAAAAGGAATGATAGT 59.176 33.333 0.00 0.00 40.15 2.12
348 349 7.979444 TTCGTCAGAAAAAGGAATGATAGTT 57.021 32.000 0.00 0.00 32.65 2.24
349 350 9.667107 ATTCGTCAGAAAAAGGAATGATAGTTA 57.333 29.630 0.00 0.00 40.15 2.24
350 351 8.475331 TCGTCAGAAAAAGGAATGATAGTTAC 57.525 34.615 0.00 0.00 0.00 2.50
351 352 8.311836 TCGTCAGAAAAAGGAATGATAGTTACT 58.688 33.333 0.00 0.00 0.00 2.24
352 353 8.936864 CGTCAGAAAAAGGAATGATAGTTACTT 58.063 33.333 0.00 0.00 33.69 2.24
383 384 9.672086 CTCTATAACAGGATTCTTAGTTTCTCG 57.328 37.037 0.00 0.00 0.00 4.04
384 385 9.186837 TCTATAACAGGATTCTTAGTTTCTCGT 57.813 33.333 0.00 0.00 0.00 4.18
385 386 9.804758 CTATAACAGGATTCTTAGTTTCTCGTT 57.195 33.333 0.00 0.00 0.00 3.85
386 387 6.787085 AACAGGATTCTTAGTTTCTCGTTG 57.213 37.500 0.00 0.00 0.00 4.10
387 388 5.238583 ACAGGATTCTTAGTTTCTCGTTGG 58.761 41.667 0.00 0.00 0.00 3.77
388 389 4.631813 CAGGATTCTTAGTTTCTCGTTGGG 59.368 45.833 0.00 0.00 0.00 4.12
389 390 3.374367 GGATTCTTAGTTTCTCGTTGGGC 59.626 47.826 0.00 0.00 0.00 5.36
390 391 3.764237 TTCTTAGTTTCTCGTTGGGCT 57.236 42.857 0.00 0.00 0.00 5.19
391 392 3.764237 TCTTAGTTTCTCGTTGGGCTT 57.236 42.857 0.00 0.00 0.00 4.35
392 393 3.660865 TCTTAGTTTCTCGTTGGGCTTC 58.339 45.455 0.00 0.00 0.00 3.86
393 394 2.467566 TAGTTTCTCGTTGGGCTTCC 57.532 50.000 0.00 0.00 0.00 3.46
394 395 0.765510 AGTTTCTCGTTGGGCTTCCT 59.234 50.000 0.00 0.00 0.00 3.36
395 396 1.157585 GTTTCTCGTTGGGCTTCCTC 58.842 55.000 0.00 0.00 0.00 3.71
396 397 0.320421 TTTCTCGTTGGGCTTCCTCG 60.320 55.000 0.00 0.00 0.00 4.63
397 398 2.125512 CTCGTTGGGCTTCCTCGG 60.126 66.667 0.00 0.00 32.74 4.63
398 399 3.665675 CTCGTTGGGCTTCCTCGGG 62.666 68.421 0.00 0.00 32.74 5.14
399 400 3.702048 CGTTGGGCTTCCTCGGGA 61.702 66.667 0.00 0.00 0.00 5.14
400 401 2.046217 GTTGGGCTTCCTCGGGAC 60.046 66.667 0.00 0.00 0.00 4.46
401 402 2.528127 TTGGGCTTCCTCGGGACA 60.528 61.111 0.00 0.00 0.00 4.02
402 403 1.923395 TTGGGCTTCCTCGGGACAT 60.923 57.895 0.00 0.00 0.00 3.06
403 404 1.497309 TTGGGCTTCCTCGGGACATT 61.497 55.000 0.00 0.00 0.00 2.71
404 405 1.303282 GGGCTTCCTCGGGACATTT 59.697 57.895 0.00 0.00 0.00 2.32
405 406 0.323451 GGGCTTCCTCGGGACATTTT 60.323 55.000 0.00 0.00 0.00 1.82
406 407 1.095600 GGCTTCCTCGGGACATTTTC 58.904 55.000 0.00 0.00 0.00 2.29
407 408 1.095600 GCTTCCTCGGGACATTTTCC 58.904 55.000 0.00 0.00 45.00 3.13
446 447 6.997239 TGAGTCATTGATCTTCCTTTCATG 57.003 37.500 0.00 0.00 0.00 3.07
447 448 5.884232 TGAGTCATTGATCTTCCTTTCATGG 59.116 40.000 0.00 0.00 0.00 3.66
448 449 5.198965 AGTCATTGATCTTCCTTTCATGGG 58.801 41.667 0.00 0.00 0.00 4.00
449 450 3.956199 TCATTGATCTTCCTTTCATGGGC 59.044 43.478 0.00 0.00 0.00 5.36
450 451 2.442236 TGATCTTCCTTTCATGGGCC 57.558 50.000 0.00 0.00 0.00 5.80
451 452 1.063717 TGATCTTCCTTTCATGGGCCC 60.064 52.381 17.59 17.59 0.00 5.80
452 453 1.216427 GATCTTCCTTTCATGGGCCCT 59.784 52.381 25.70 5.48 0.00 5.19
453 454 0.332632 TCTTCCTTTCATGGGCCCTG 59.667 55.000 25.70 18.57 0.00 4.45
454 455 0.040204 CTTCCTTTCATGGGCCCTGT 59.960 55.000 25.70 9.17 0.00 4.00
455 456 1.284785 CTTCCTTTCATGGGCCCTGTA 59.715 52.381 25.70 9.85 0.00 2.74
456 457 1.607225 TCCTTTCATGGGCCCTGTAT 58.393 50.000 25.70 5.04 0.00 2.29
457 458 2.782922 TCCTTTCATGGGCCCTGTATA 58.217 47.619 25.70 1.02 0.00 1.47
458 459 3.335748 TCCTTTCATGGGCCCTGTATAT 58.664 45.455 25.70 4.12 0.00 0.86
459 460 3.726859 TCCTTTCATGGGCCCTGTATATT 59.273 43.478 25.70 0.00 0.00 1.28
460 461 4.082125 CCTTTCATGGGCCCTGTATATTC 58.918 47.826 25.70 0.00 0.00 1.75
461 462 4.202609 CCTTTCATGGGCCCTGTATATTCT 60.203 45.833 25.70 0.00 0.00 2.40
462 463 5.388654 CTTTCATGGGCCCTGTATATTCTT 58.611 41.667 25.70 0.00 0.00 2.52
463 464 4.640771 TCATGGGCCCTGTATATTCTTC 57.359 45.455 25.70 0.00 0.00 2.87
464 465 3.980022 TCATGGGCCCTGTATATTCTTCA 59.020 43.478 25.70 0.00 0.00 3.02
465 466 4.603171 TCATGGGCCCTGTATATTCTTCAT 59.397 41.667 25.70 0.00 0.00 2.57
466 467 5.790096 TCATGGGCCCTGTATATTCTTCATA 59.210 40.000 25.70 0.00 0.00 2.15
467 468 5.499004 TGGGCCCTGTATATTCTTCATAC 57.501 43.478 25.70 0.00 0.00 2.39
468 469 4.288626 TGGGCCCTGTATATTCTTCATACC 59.711 45.833 25.70 0.00 0.00 2.73
469 470 4.288626 GGGCCCTGTATATTCTTCATACCA 59.711 45.833 17.04 0.00 0.00 3.25
470 471 5.044846 GGGCCCTGTATATTCTTCATACCAT 60.045 44.000 17.04 0.00 0.00 3.55
471 472 6.485171 GGCCCTGTATATTCTTCATACCATT 58.515 40.000 0.00 0.00 0.00 3.16
472 473 6.599638 GGCCCTGTATATTCTTCATACCATTC 59.400 42.308 0.00 0.00 0.00 2.67
473 474 6.599638 GCCCTGTATATTCTTCATACCATTCC 59.400 42.308 0.00 0.00 0.00 3.01
474 475 7.529560 GCCCTGTATATTCTTCATACCATTCCT 60.530 40.741 0.00 0.00 0.00 3.36
475 476 9.046846 CCCTGTATATTCTTCATACCATTCCTA 57.953 37.037 0.00 0.00 0.00 2.94
488 489 9.832445 TCATACCATTCCTAAAATACAGAACTC 57.168 33.333 0.00 0.00 0.00 3.01
489 490 9.838339 CATACCATTCCTAAAATACAGAACTCT 57.162 33.333 0.00 0.00 0.00 3.24
506 507 9.899226 ACAGAACTCTAAAAATGATTTAAGCAC 57.101 29.630 0.00 0.00 0.00 4.40
507 508 9.897744 CAGAACTCTAAAAATGATTTAAGCACA 57.102 29.630 0.00 0.00 0.00 4.57
517 518 8.614994 AAATGATTTAAGCACAATAACTACGC 57.385 30.769 0.00 0.00 0.00 4.42
518 519 6.114221 TGATTTAAGCACAATAACTACGCC 57.886 37.500 0.00 0.00 0.00 5.68
519 520 5.644206 TGATTTAAGCACAATAACTACGCCA 59.356 36.000 0.00 0.00 0.00 5.69
520 521 5.943706 TTTAAGCACAATAACTACGCCAA 57.056 34.783 0.00 0.00 0.00 4.52
521 522 5.539582 TTAAGCACAATAACTACGCCAAG 57.460 39.130 0.00 0.00 0.00 3.61
522 523 3.053831 AGCACAATAACTACGCCAAGT 57.946 42.857 0.00 0.00 0.00 3.16
523 524 4.196626 AGCACAATAACTACGCCAAGTA 57.803 40.909 0.00 0.00 0.00 2.24
524 525 3.930848 AGCACAATAACTACGCCAAGTAC 59.069 43.478 0.00 0.00 0.00 2.73
525 526 3.930848 GCACAATAACTACGCCAAGTACT 59.069 43.478 0.00 0.00 0.00 2.73
526 527 5.104374 GCACAATAACTACGCCAAGTACTA 58.896 41.667 0.00 0.00 0.00 1.82
527 528 5.751990 GCACAATAACTACGCCAAGTACTAT 59.248 40.000 0.00 0.00 0.00 2.12
528 529 6.257193 GCACAATAACTACGCCAAGTACTATT 59.743 38.462 0.00 0.00 0.00 1.73
529 530 7.201582 GCACAATAACTACGCCAAGTACTATTT 60.202 37.037 0.00 0.00 0.00 1.40
530 531 8.662141 CACAATAACTACGCCAAGTACTATTTT 58.338 33.333 0.00 0.00 0.00 1.82
531 532 9.874205 ACAATAACTACGCCAAGTACTATTTTA 57.126 29.630 0.00 0.00 0.00 1.52
534 535 6.875926 ACTACGCCAAGTACTATTTTAACG 57.124 37.500 0.00 0.00 0.00 3.18
535 536 4.588805 ACGCCAAGTACTATTTTAACGC 57.411 40.909 0.00 0.00 0.00 4.84
536 537 3.995705 ACGCCAAGTACTATTTTAACGCA 59.004 39.130 0.00 0.00 0.00 5.24
537 538 4.451774 ACGCCAAGTACTATTTTAACGCAA 59.548 37.500 0.00 0.00 0.00 4.85
539 540 5.329493 GCCAAGTACTATTTTAACGCAAGG 58.671 41.667 0.00 0.00 46.39 3.61
540 541 5.329493 CCAAGTACTATTTTAACGCAAGGC 58.671 41.667 0.00 0.00 46.39 4.35
541 542 5.123344 CCAAGTACTATTTTAACGCAAGGCT 59.877 40.000 0.00 0.00 46.39 4.58
542 543 6.349033 CCAAGTACTATTTTAACGCAAGGCTT 60.349 38.462 0.00 0.00 46.39 4.35
543 544 6.812879 AGTACTATTTTAACGCAAGGCTTT 57.187 33.333 0.00 0.00 46.39 3.51
544 545 6.608610 AGTACTATTTTAACGCAAGGCTTTG 58.391 36.000 3.80 3.80 46.39 2.77
556 557 2.877691 GCTTTGCCACATCGGGTC 59.122 61.111 0.00 0.00 34.06 4.46
557 558 1.675641 GCTTTGCCACATCGGGTCT 60.676 57.895 0.00 0.00 34.06 3.85
558 559 1.244019 GCTTTGCCACATCGGGTCTT 61.244 55.000 0.00 0.00 34.06 3.01
559 560 1.247567 CTTTGCCACATCGGGTCTTT 58.752 50.000 0.00 0.00 34.06 2.52
560 561 1.613437 CTTTGCCACATCGGGTCTTTT 59.387 47.619 0.00 0.00 34.06 2.27
561 562 2.570415 TTGCCACATCGGGTCTTTTA 57.430 45.000 0.00 0.00 34.06 1.52
562 563 2.570415 TGCCACATCGGGTCTTTTAA 57.430 45.000 0.00 0.00 34.06 1.52
563 564 2.156098 TGCCACATCGGGTCTTTTAAC 58.844 47.619 0.00 0.00 34.06 2.01
564 565 2.224670 TGCCACATCGGGTCTTTTAACT 60.225 45.455 0.00 0.00 34.06 2.24
565 566 2.161609 GCCACATCGGGTCTTTTAACTG 59.838 50.000 0.00 0.00 34.06 3.16
566 567 3.670625 CCACATCGGGTCTTTTAACTGA 58.329 45.455 0.00 0.00 0.00 3.41
567 568 4.069304 CCACATCGGGTCTTTTAACTGAA 58.931 43.478 0.00 0.00 0.00 3.02
568 569 4.517453 CCACATCGGGTCTTTTAACTGAAA 59.483 41.667 0.00 0.00 0.00 2.69
569 570 5.183140 CCACATCGGGTCTTTTAACTGAAAT 59.817 40.000 0.00 0.00 0.00 2.17
570 571 6.086222 CACATCGGGTCTTTTAACTGAAATG 58.914 40.000 0.00 0.00 0.00 2.32
571 572 4.759516 TCGGGTCTTTTAACTGAAATGC 57.240 40.909 0.00 0.00 0.00 3.56
572 573 4.138290 TCGGGTCTTTTAACTGAAATGCA 58.862 39.130 0.00 0.00 0.00 3.96
573 574 4.764823 TCGGGTCTTTTAACTGAAATGCAT 59.235 37.500 0.00 0.00 0.00 3.96
574 575 5.095490 CGGGTCTTTTAACTGAAATGCATC 58.905 41.667 0.00 0.00 0.00 3.91
575 576 5.335583 CGGGTCTTTTAACTGAAATGCATCA 60.336 40.000 0.00 0.00 0.00 3.07
576 577 6.454795 GGGTCTTTTAACTGAAATGCATCAA 58.545 36.000 0.00 0.00 0.00 2.57
577 578 7.099120 GGGTCTTTTAACTGAAATGCATCAAT 58.901 34.615 0.00 0.00 0.00 2.57
578 579 7.276438 GGGTCTTTTAACTGAAATGCATCAATC 59.724 37.037 0.00 0.00 0.00 2.67
579 580 7.276438 GGTCTTTTAACTGAAATGCATCAATCC 59.724 37.037 0.00 0.00 0.00 3.01
580 581 7.814107 GTCTTTTAACTGAAATGCATCAATCCA 59.186 33.333 0.00 0.00 0.00 3.41
581 582 7.814107 TCTTTTAACTGAAATGCATCAATCCAC 59.186 33.333 0.00 0.00 0.00 4.02
582 583 3.770263 ACTGAAATGCATCAATCCACG 57.230 42.857 0.00 0.00 0.00 4.94
583 584 3.346315 ACTGAAATGCATCAATCCACGA 58.654 40.909 0.00 0.00 0.00 4.35
584 585 3.949754 ACTGAAATGCATCAATCCACGAT 59.050 39.130 0.00 0.00 0.00 3.73
585 586 5.125356 ACTGAAATGCATCAATCCACGATA 58.875 37.500 0.00 0.00 0.00 2.92
586 587 5.008019 ACTGAAATGCATCAATCCACGATAC 59.992 40.000 0.00 0.00 0.00 2.24
587 588 5.125356 TGAAATGCATCAATCCACGATACT 58.875 37.500 0.00 0.00 0.00 2.12
588 589 6.287525 TGAAATGCATCAATCCACGATACTA 58.712 36.000 0.00 0.00 0.00 1.82
589 590 6.424812 TGAAATGCATCAATCCACGATACTAG 59.575 38.462 0.00 0.00 0.00 2.57
590 591 4.937201 TGCATCAATCCACGATACTAGT 57.063 40.909 0.00 0.00 0.00 2.57
591 592 6.590234 ATGCATCAATCCACGATACTAGTA 57.410 37.500 4.77 4.77 0.00 1.82
592 593 5.769367 TGCATCAATCCACGATACTAGTAC 58.231 41.667 4.31 0.00 0.00 2.73
593 594 5.162075 GCATCAATCCACGATACTAGTACC 58.838 45.833 4.31 0.00 0.00 3.34
594 595 5.047943 GCATCAATCCACGATACTAGTACCT 60.048 44.000 4.31 0.00 0.00 3.08
595 596 6.382608 CATCAATCCACGATACTAGTACCTG 58.617 44.000 4.31 0.59 0.00 4.00
596 597 4.277672 TCAATCCACGATACTAGTACCTGC 59.722 45.833 4.31 0.00 0.00 4.85
597 598 3.572632 TCCACGATACTAGTACCTGCT 57.427 47.619 4.31 0.00 0.00 4.24
598 599 3.474600 TCCACGATACTAGTACCTGCTC 58.525 50.000 4.31 0.00 0.00 4.26
599 600 3.136077 TCCACGATACTAGTACCTGCTCT 59.864 47.826 4.31 0.00 0.00 4.09
600 601 4.346127 TCCACGATACTAGTACCTGCTCTA 59.654 45.833 4.31 0.00 0.00 2.43
601 602 4.451774 CCACGATACTAGTACCTGCTCTAC 59.548 50.000 4.31 0.00 0.00 2.59
602 603 5.055144 CACGATACTAGTACCTGCTCTACA 58.945 45.833 4.31 0.00 0.00 2.74
603 604 5.526479 CACGATACTAGTACCTGCTCTACAA 59.474 44.000 4.31 0.00 0.00 2.41
604 605 6.205076 CACGATACTAGTACCTGCTCTACAAT 59.795 42.308 4.31 0.00 0.00 2.71
605 606 6.427547 ACGATACTAGTACCTGCTCTACAATC 59.572 42.308 4.31 0.00 0.00 2.67
606 607 6.651643 CGATACTAGTACCTGCTCTACAATCT 59.348 42.308 4.31 0.00 0.00 2.40
607 608 7.148540 CGATACTAGTACCTGCTCTACAATCTC 60.149 44.444 4.31 0.00 0.00 2.75
608 609 5.756918 ACTAGTACCTGCTCTACAATCTCA 58.243 41.667 0.00 0.00 0.00 3.27
609 610 5.825679 ACTAGTACCTGCTCTACAATCTCAG 59.174 44.000 0.00 0.00 0.00 3.35
610 611 4.605183 AGTACCTGCTCTACAATCTCAGT 58.395 43.478 0.00 0.00 0.00 3.41
611 612 3.883830 ACCTGCTCTACAATCTCAGTG 57.116 47.619 0.00 0.00 0.00 3.66
612 613 2.499289 ACCTGCTCTACAATCTCAGTGG 59.501 50.000 0.00 0.00 0.00 4.00
613 614 2.499289 CCTGCTCTACAATCTCAGTGGT 59.501 50.000 0.00 0.00 0.00 4.16
614 615 3.055530 CCTGCTCTACAATCTCAGTGGTT 60.056 47.826 0.00 0.00 0.00 3.67
615 616 4.160439 CCTGCTCTACAATCTCAGTGGTTA 59.840 45.833 0.00 0.00 0.00 2.85
616 617 5.337571 CCTGCTCTACAATCTCAGTGGTTAA 60.338 44.000 0.00 0.00 0.00 2.01
617 618 6.299805 TGCTCTACAATCTCAGTGGTTAAT 57.700 37.500 0.00 0.00 0.00 1.40
618 619 6.108687 TGCTCTACAATCTCAGTGGTTAATG 58.891 40.000 0.00 0.00 0.00 1.90
619 620 6.070824 TGCTCTACAATCTCAGTGGTTAATGA 60.071 38.462 0.00 0.00 0.00 2.57
620 621 6.989169 GCTCTACAATCTCAGTGGTTAATGAT 59.011 38.462 0.00 0.00 29.56 2.45
621 622 7.042187 GCTCTACAATCTCAGTGGTTAATGATG 60.042 40.741 0.00 0.00 29.56 3.07
622 623 5.824904 ACAATCTCAGTGGTTAATGATGC 57.175 39.130 0.00 0.00 29.56 3.91
623 624 5.255687 ACAATCTCAGTGGTTAATGATGCA 58.744 37.500 0.00 0.00 29.56 3.96
624 625 5.889853 ACAATCTCAGTGGTTAATGATGCAT 59.110 36.000 0.00 0.00 29.56 3.96
625 626 6.183360 ACAATCTCAGTGGTTAATGATGCATG 60.183 38.462 2.46 0.00 29.56 4.06
626 627 4.847198 TCTCAGTGGTTAATGATGCATGT 58.153 39.130 2.46 0.00 29.56 3.21
627 628 4.877823 TCTCAGTGGTTAATGATGCATGTC 59.122 41.667 2.46 0.00 29.56 3.06
628 629 4.587891 TCAGTGGTTAATGATGCATGTCA 58.412 39.130 2.46 0.00 0.00 3.58
629 630 4.637091 TCAGTGGTTAATGATGCATGTCAG 59.363 41.667 2.46 0.00 0.00 3.51
630 631 4.397103 CAGTGGTTAATGATGCATGTCAGT 59.603 41.667 2.46 0.00 0.00 3.41
631 632 5.585844 CAGTGGTTAATGATGCATGTCAGTA 59.414 40.000 2.46 0.00 0.00 2.74
632 633 6.261603 CAGTGGTTAATGATGCATGTCAGTAT 59.738 38.462 2.46 0.00 29.94 2.12
633 634 6.261603 AGTGGTTAATGATGCATGTCAGTATG 59.738 38.462 2.46 0.00 29.94 2.39
652 653 9.777297 TCAGTATGATGTTATTAAGCTATGCAA 57.223 29.630 0.00 0.00 42.56 4.08
653 654 9.817365 CAGTATGATGTTATTAAGCTATGCAAC 57.183 33.333 0.00 0.00 39.69 4.17
654 655 9.784531 AGTATGATGTTATTAAGCTATGCAACT 57.215 29.630 0.00 0.00 0.00 3.16
656 657 8.915057 ATGATGTTATTAAGCTATGCAACTCT 57.085 30.769 0.00 0.00 0.00 3.24
657 658 8.737168 TGATGTTATTAAGCTATGCAACTCTT 57.263 30.769 0.00 0.00 0.00 2.85
658 659 9.177608 TGATGTTATTAAGCTATGCAACTCTTT 57.822 29.630 0.00 0.00 0.00 2.52
1871 1887 8.565896 TGATCATATATGTATTCCAACAAGGC 57.434 34.615 12.42 0.00 37.29 4.35
1893 1909 1.405463 GGAGGATTTTCAATGCGGGAC 59.595 52.381 0.00 0.00 0.00 4.46
1912 1928 6.146347 GCGGGACATAAAAACATATCTCTCTC 59.854 42.308 0.00 0.00 0.00 3.20
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.370189 AGGGCGAGATTCATCTTAAGGG 59.630 50.000 1.85 0.00 37.25 3.95
1 2 3.658709 GAGGGCGAGATTCATCTTAAGG 58.341 50.000 1.85 0.00 37.25 2.69
2 3 3.004839 TCGAGGGCGAGATTCATCTTAAG 59.995 47.826 0.00 0.00 42.51 1.85
3 4 2.956333 TCGAGGGCGAGATTCATCTTAA 59.044 45.455 0.00 0.00 42.51 1.85
4 5 2.583143 TCGAGGGCGAGATTCATCTTA 58.417 47.619 0.00 0.00 42.51 2.10
5 6 1.403814 TCGAGGGCGAGATTCATCTT 58.596 50.000 0.00 0.00 42.51 2.40
6 7 3.117657 TCGAGGGCGAGATTCATCT 57.882 52.632 0.00 0.00 42.51 2.90
15 16 3.217017 CCCGAATCTCGAGGGCGA 61.217 66.667 13.56 0.00 43.74 5.54
19 20 1.521681 GCCAACCCGAATCTCGAGG 60.522 63.158 13.56 0.00 43.74 4.63
20 21 0.744874 TAGCCAACCCGAATCTCGAG 59.255 55.000 5.93 5.93 43.74 4.04
21 22 0.744874 CTAGCCAACCCGAATCTCGA 59.255 55.000 0.00 0.00 43.74 4.04
22 23 0.744874 TCTAGCCAACCCGAATCTCG 59.255 55.000 0.00 0.00 40.07 4.04
23 24 2.981859 TTCTAGCCAACCCGAATCTC 57.018 50.000 0.00 0.00 0.00 2.75
24 25 3.713826 TTTTCTAGCCAACCCGAATCT 57.286 42.857 0.00 0.00 0.00 2.40
25 26 4.515567 CCTATTTTCTAGCCAACCCGAATC 59.484 45.833 0.00 0.00 0.00 2.52
26 27 4.079958 ACCTATTTTCTAGCCAACCCGAAT 60.080 41.667 0.00 0.00 0.00 3.34
27 28 3.264964 ACCTATTTTCTAGCCAACCCGAA 59.735 43.478 0.00 0.00 0.00 4.30
28 29 2.841881 ACCTATTTTCTAGCCAACCCGA 59.158 45.455 0.00 0.00 0.00 5.14
29 30 2.943033 CACCTATTTTCTAGCCAACCCG 59.057 50.000 0.00 0.00 0.00 5.28
30 31 4.200092 CTCACCTATTTTCTAGCCAACCC 58.800 47.826 0.00 0.00 0.00 4.11
31 32 4.200092 CCTCACCTATTTTCTAGCCAACC 58.800 47.826 0.00 0.00 0.00 3.77
32 33 4.200092 CCCTCACCTATTTTCTAGCCAAC 58.800 47.826 0.00 0.00 0.00 3.77
33 34 3.850173 ACCCTCACCTATTTTCTAGCCAA 59.150 43.478 0.00 0.00 0.00 4.52
34 35 3.199946 CACCCTCACCTATTTTCTAGCCA 59.800 47.826 0.00 0.00 0.00 4.75
35 36 3.454812 TCACCCTCACCTATTTTCTAGCC 59.545 47.826 0.00 0.00 0.00 3.93
36 37 4.755266 TCACCCTCACCTATTTTCTAGC 57.245 45.455 0.00 0.00 0.00 3.42
37 38 5.604650 AGGATCACCCTCACCTATTTTCTAG 59.395 44.000 0.00 0.00 43.31 2.43
38 39 5.538877 AGGATCACCCTCACCTATTTTCTA 58.461 41.667 0.00 0.00 43.31 2.10
39 40 4.375313 AGGATCACCCTCACCTATTTTCT 58.625 43.478 0.00 0.00 43.31 2.52
40 41 4.779993 AGGATCACCCTCACCTATTTTC 57.220 45.455 0.00 0.00 43.31 2.29
68 69 2.025898 CCTAGGAACGAGAGGAAGACC 58.974 57.143 1.05 0.00 30.78 3.85
69 70 2.424246 CACCTAGGAACGAGAGGAAGAC 59.576 54.545 17.98 0.00 34.24 3.01
70 71 2.620886 CCACCTAGGAACGAGAGGAAGA 60.621 54.545 17.98 0.00 41.22 2.87
71 72 1.751924 CCACCTAGGAACGAGAGGAAG 59.248 57.143 17.98 0.00 41.22 3.46
72 73 1.848652 CCACCTAGGAACGAGAGGAA 58.151 55.000 17.98 0.00 41.22 3.36
73 74 0.683504 GCCACCTAGGAACGAGAGGA 60.684 60.000 17.98 0.00 41.22 3.71
74 75 0.684805 AGCCACCTAGGAACGAGAGG 60.685 60.000 17.98 6.39 41.22 3.69
75 76 1.135333 GAAGCCACCTAGGAACGAGAG 59.865 57.143 17.98 0.00 41.22 3.20
76 77 1.183549 GAAGCCACCTAGGAACGAGA 58.816 55.000 17.98 0.00 41.22 4.04
77 78 0.895530 TGAAGCCACCTAGGAACGAG 59.104 55.000 17.98 0.00 41.22 4.18
78 79 1.480954 GATGAAGCCACCTAGGAACGA 59.519 52.381 17.98 0.00 41.22 3.85
79 80 1.473434 GGATGAAGCCACCTAGGAACG 60.473 57.143 17.98 3.03 41.22 3.95
80 81 1.840635 AGGATGAAGCCACCTAGGAAC 59.159 52.381 17.98 3.91 41.22 3.62
81 82 2.119495 GAGGATGAAGCCACCTAGGAA 58.881 52.381 17.98 0.00 41.22 3.36
82 83 1.794714 GAGGATGAAGCCACCTAGGA 58.205 55.000 17.98 0.00 41.22 2.94
83 84 0.390860 CGAGGATGAAGCCACCTAGG 59.609 60.000 7.41 7.41 41.84 3.02
84 85 0.390860 CCGAGGATGAAGCCACCTAG 59.609 60.000 0.00 0.00 33.89 3.02
85 86 0.325296 ACCGAGGATGAAGCCACCTA 60.325 55.000 0.00 0.00 33.89 3.08
86 87 0.325296 TACCGAGGATGAAGCCACCT 60.325 55.000 0.00 0.00 36.68 4.00
87 88 0.759346 ATACCGAGGATGAAGCCACC 59.241 55.000 0.00 0.00 0.00 4.61
88 89 1.541233 CCATACCGAGGATGAAGCCAC 60.541 57.143 0.00 0.00 0.00 5.01
89 90 0.758734 CCATACCGAGGATGAAGCCA 59.241 55.000 0.00 0.00 0.00 4.75
90 91 0.759346 ACCATACCGAGGATGAAGCC 59.241 55.000 0.00 0.00 0.00 4.35
91 92 1.541233 CCACCATACCGAGGATGAAGC 60.541 57.143 0.00 0.00 0.00 3.86
92 93 1.541233 GCCACCATACCGAGGATGAAG 60.541 57.143 0.00 0.00 0.00 3.02
93 94 0.468226 GCCACCATACCGAGGATGAA 59.532 55.000 0.00 0.00 0.00 2.57
94 95 0.398522 AGCCACCATACCGAGGATGA 60.399 55.000 0.00 0.00 0.00 2.92
95 96 0.034059 GAGCCACCATACCGAGGATG 59.966 60.000 0.00 0.00 0.00 3.51
96 97 1.122019 GGAGCCACCATACCGAGGAT 61.122 60.000 0.00 0.00 38.79 3.24
97 98 1.760875 GGAGCCACCATACCGAGGA 60.761 63.158 0.00 0.00 38.79 3.71
98 99 2.063979 TGGAGCCACCATACCGAGG 61.064 63.158 0.00 0.00 44.64 4.63
99 100 3.628989 TGGAGCCACCATACCGAG 58.371 61.111 0.00 0.00 44.64 4.63
108 109 0.312102 GCAAAGTTCAGTGGAGCCAC 59.688 55.000 11.67 11.67 46.50 5.01
109 110 0.106769 TGCAAAGTTCAGTGGAGCCA 60.107 50.000 0.00 0.00 0.00 4.75
110 111 0.595095 CTGCAAAGTTCAGTGGAGCC 59.405 55.000 0.00 0.00 0.00 4.70
111 112 1.597742 TCTGCAAAGTTCAGTGGAGC 58.402 50.000 0.00 0.00 33.57 4.70
112 113 3.209410 AGTTCTGCAAAGTTCAGTGGAG 58.791 45.455 0.00 0.00 34.75 3.86
113 114 3.281727 AGTTCTGCAAAGTTCAGTGGA 57.718 42.857 0.00 0.00 33.48 4.02
114 115 3.378112 TCAAGTTCTGCAAAGTTCAGTGG 59.622 43.478 0.00 0.00 33.48 4.00
115 116 4.621068 TCAAGTTCTGCAAAGTTCAGTG 57.379 40.909 0.00 0.00 33.48 3.66
116 117 6.238759 GGTTATCAAGTTCTGCAAAGTTCAGT 60.239 38.462 0.00 0.00 33.48 3.41
117 118 6.016777 AGGTTATCAAGTTCTGCAAAGTTCAG 60.017 38.462 0.00 0.00 0.00 3.02
118 119 5.827797 AGGTTATCAAGTTCTGCAAAGTTCA 59.172 36.000 0.00 0.00 0.00 3.18
119 120 6.319141 AGGTTATCAAGTTCTGCAAAGTTC 57.681 37.500 0.00 0.00 0.00 3.01
120 121 6.096846 ACAAGGTTATCAAGTTCTGCAAAGTT 59.903 34.615 0.00 0.00 0.00 2.66
121 122 5.594317 ACAAGGTTATCAAGTTCTGCAAAGT 59.406 36.000 0.00 0.00 0.00 2.66
122 123 6.076981 ACAAGGTTATCAAGTTCTGCAAAG 57.923 37.500 0.00 0.00 0.00 2.77
123 124 6.272318 CAACAAGGTTATCAAGTTCTGCAAA 58.728 36.000 0.00 0.00 0.00 3.68
124 125 5.735922 GCAACAAGGTTATCAAGTTCTGCAA 60.736 40.000 0.00 0.00 0.00 4.08
125 126 4.261572 GCAACAAGGTTATCAAGTTCTGCA 60.262 41.667 0.00 0.00 0.00 4.41
126 127 4.229876 GCAACAAGGTTATCAAGTTCTGC 58.770 43.478 0.00 0.00 0.00 4.26
127 128 4.024048 ACGCAACAAGGTTATCAAGTTCTG 60.024 41.667 0.00 0.00 0.00 3.02
128 129 4.024048 CACGCAACAAGGTTATCAAGTTCT 60.024 41.667 0.00 0.00 0.00 3.01
129 130 4.219033 CACGCAACAAGGTTATCAAGTTC 58.781 43.478 0.00 0.00 0.00 3.01
130 131 3.630312 ACACGCAACAAGGTTATCAAGTT 59.370 39.130 0.00 0.00 0.00 2.66
131 132 3.211045 ACACGCAACAAGGTTATCAAGT 58.789 40.909 0.00 0.00 0.00 3.16
132 133 3.896648 ACACGCAACAAGGTTATCAAG 57.103 42.857 0.00 0.00 0.00 3.02
133 134 4.817464 AGTTACACGCAACAAGGTTATCAA 59.183 37.500 0.00 0.00 0.00 2.57
134 135 4.382291 AGTTACACGCAACAAGGTTATCA 58.618 39.130 0.00 0.00 0.00 2.15
135 136 4.433805 CGAGTTACACGCAACAAGGTTATC 60.434 45.833 0.00 0.00 0.00 1.75
136 137 3.430895 CGAGTTACACGCAACAAGGTTAT 59.569 43.478 0.00 0.00 0.00 1.89
137 138 2.796031 CGAGTTACACGCAACAAGGTTA 59.204 45.455 0.00 0.00 0.00 2.85
138 139 1.595794 CGAGTTACACGCAACAAGGTT 59.404 47.619 0.00 0.00 0.00 3.50
139 140 1.214367 CGAGTTACACGCAACAAGGT 58.786 50.000 0.00 0.00 0.00 3.50
140 141 0.511221 CCGAGTTACACGCAACAAGG 59.489 55.000 0.00 0.00 0.00 3.61
141 142 0.110823 GCCGAGTTACACGCAACAAG 60.111 55.000 0.00 0.00 0.00 3.16
142 143 0.531090 AGCCGAGTTACACGCAACAA 60.531 50.000 0.00 0.00 0.00 2.83
143 144 1.068417 AGCCGAGTTACACGCAACA 59.932 52.632 0.00 0.00 0.00 3.33
144 145 1.491563 CAGCCGAGTTACACGCAAC 59.508 57.895 0.00 0.00 0.00 4.17
145 146 1.666553 CCAGCCGAGTTACACGCAA 60.667 57.895 0.00 0.00 0.00 4.85
146 147 2.048597 CCAGCCGAGTTACACGCA 60.049 61.111 0.00 0.00 0.00 5.24
147 148 3.488090 GCCAGCCGAGTTACACGC 61.488 66.667 0.00 0.00 0.00 5.34
148 149 1.225376 TTTGCCAGCCGAGTTACACG 61.225 55.000 0.00 0.00 0.00 4.49
149 150 0.237498 GTTTGCCAGCCGAGTTACAC 59.763 55.000 0.00 0.00 0.00 2.90
150 151 0.107831 AGTTTGCCAGCCGAGTTACA 59.892 50.000 0.00 0.00 0.00 2.41
151 152 0.796927 GAGTTTGCCAGCCGAGTTAC 59.203 55.000 0.00 0.00 0.00 2.50
152 153 0.669318 CGAGTTTGCCAGCCGAGTTA 60.669 55.000 0.00 0.00 0.00 2.24
153 154 1.961277 CGAGTTTGCCAGCCGAGTT 60.961 57.895 0.00 0.00 0.00 3.01
154 155 2.357517 CGAGTTTGCCAGCCGAGT 60.358 61.111 0.00 0.00 0.00 4.18
155 156 2.048222 TCGAGTTTGCCAGCCGAG 60.048 61.111 0.00 0.00 0.00 4.63
156 157 1.888436 ATCTCGAGTTTGCCAGCCGA 61.888 55.000 13.13 0.00 0.00 5.54
157 158 0.179111 TATCTCGAGTTTGCCAGCCG 60.179 55.000 13.13 0.00 0.00 5.52
158 159 1.291132 GTATCTCGAGTTTGCCAGCC 58.709 55.000 13.13 0.00 0.00 4.85
159 160 1.929836 CTGTATCTCGAGTTTGCCAGC 59.070 52.381 13.13 0.00 0.00 4.85
160 161 2.926200 CACTGTATCTCGAGTTTGCCAG 59.074 50.000 13.13 13.84 0.00 4.85
161 162 2.930887 GCACTGTATCTCGAGTTTGCCA 60.931 50.000 13.13 2.95 0.00 4.92
162 163 1.661112 GCACTGTATCTCGAGTTTGCC 59.339 52.381 13.13 0.00 0.00 4.52
163 164 1.661112 GGCACTGTATCTCGAGTTTGC 59.339 52.381 13.13 10.46 0.00 3.68
164 165 2.668457 GTGGCACTGTATCTCGAGTTTG 59.332 50.000 13.13 0.46 0.00 2.93
165 166 2.563179 AGTGGCACTGTATCTCGAGTTT 59.437 45.455 21.37 4.09 0.00 2.66
166 167 2.094494 CAGTGGCACTGTATCTCGAGTT 60.094 50.000 34.00 6.80 41.19 3.01
167 168 1.474478 CAGTGGCACTGTATCTCGAGT 59.526 52.381 34.00 0.37 41.19 4.18
168 169 1.202348 CCAGTGGCACTGTATCTCGAG 60.202 57.143 37.43 20.78 44.50 4.04
169 170 0.817654 CCAGTGGCACTGTATCTCGA 59.182 55.000 37.43 0.00 44.50 4.04
170 171 0.817654 TCCAGTGGCACTGTATCTCG 59.182 55.000 37.43 24.63 44.50 4.04
171 172 2.497675 TCTTCCAGTGGCACTGTATCTC 59.502 50.000 37.43 3.05 44.50 2.75
172 173 2.499289 CTCTTCCAGTGGCACTGTATCT 59.501 50.000 37.43 7.94 44.50 1.98
173 174 2.497675 TCTCTTCCAGTGGCACTGTATC 59.502 50.000 37.43 4.60 44.50 2.24
174 175 2.540383 TCTCTTCCAGTGGCACTGTAT 58.460 47.619 37.43 9.10 44.50 2.29
175 176 2.009681 TCTCTTCCAGTGGCACTGTA 57.990 50.000 37.43 25.72 44.50 2.74
176 177 1.356124 ATCTCTTCCAGTGGCACTGT 58.644 50.000 37.43 20.24 44.50 3.55
177 178 2.234661 TGTATCTCTTCCAGTGGCACTG 59.765 50.000 35.08 35.08 45.53 3.66
178 179 2.499289 CTGTATCTCTTCCAGTGGCACT 59.501 50.000 15.88 15.88 0.00 4.40
179 180 2.234908 ACTGTATCTCTTCCAGTGGCAC 59.765 50.000 10.29 10.29 38.00 5.01
180 181 2.540383 ACTGTATCTCTTCCAGTGGCA 58.460 47.619 3.51 0.00 38.00 4.92
184 185 1.834263 GGGCACTGTATCTCTTCCAGT 59.166 52.381 0.00 0.00 39.93 4.00
185 186 1.139853 GGGGCACTGTATCTCTTCCAG 59.860 57.143 0.00 0.00 0.00 3.86
186 187 1.204146 GGGGCACTGTATCTCTTCCA 58.796 55.000 0.00 0.00 0.00 3.53
187 188 1.501582 AGGGGCACTGTATCTCTTCC 58.498 55.000 0.00 0.00 0.00 3.46
188 189 4.636249 CATAAGGGGCACTGTATCTCTTC 58.364 47.826 0.00 0.00 0.00 2.87
189 190 3.181450 GCATAAGGGGCACTGTATCTCTT 60.181 47.826 0.00 1.35 0.00 2.85
190 191 2.370189 GCATAAGGGGCACTGTATCTCT 59.630 50.000 0.00 0.00 0.00 3.10
191 192 2.370189 AGCATAAGGGGCACTGTATCTC 59.630 50.000 0.00 0.00 0.00 2.75
192 193 2.412591 AGCATAAGGGGCACTGTATCT 58.587 47.619 0.00 0.00 0.00 1.98
193 194 2.938956 AGCATAAGGGGCACTGTATC 57.061 50.000 0.00 0.00 0.00 2.24
194 195 5.072741 CAAATAGCATAAGGGGCACTGTAT 58.927 41.667 0.00 0.00 0.00 2.29
195 196 4.460263 CAAATAGCATAAGGGGCACTGTA 58.540 43.478 0.00 0.00 0.00 2.74
196 197 3.290710 CAAATAGCATAAGGGGCACTGT 58.709 45.455 0.00 0.00 0.00 3.55
197 198 2.035066 GCAAATAGCATAAGGGGCACTG 59.965 50.000 0.00 0.00 44.79 3.66
198 199 2.310538 GCAAATAGCATAAGGGGCACT 58.689 47.619 0.00 0.00 44.79 4.40
199 200 2.800881 GCAAATAGCATAAGGGGCAC 57.199 50.000 0.00 0.00 44.79 5.01
244 245 9.856488 CACAATTGAAATCATTGAGAAAGAGAT 57.144 29.630 13.59 0.00 0.00 2.75
245 246 9.070179 TCACAATTGAAATCATTGAGAAAGAGA 57.930 29.630 13.59 0.00 0.00 3.10
246 247 9.856488 ATCACAATTGAAATCATTGAGAAAGAG 57.144 29.630 13.59 0.00 34.61 2.85
250 251 9.558648 CGTAATCACAATTGAAATCATTGAGAA 57.441 29.630 13.59 0.00 34.61 2.87
251 252 8.945057 TCGTAATCACAATTGAAATCATTGAGA 58.055 29.630 13.59 8.94 34.61 3.27
252 253 9.726232 ATCGTAATCACAATTGAAATCATTGAG 57.274 29.630 13.59 2.45 34.61 3.02
298 299 4.312443 TGTAATCCTCCAAGTTCACGAAC 58.688 43.478 1.54 1.54 41.45 3.95
299 300 4.610605 TGTAATCCTCCAAGTTCACGAA 57.389 40.909 0.00 0.00 0.00 3.85
300 301 4.221924 TCATGTAATCCTCCAAGTTCACGA 59.778 41.667 0.00 0.00 0.00 4.35
301 302 4.503910 TCATGTAATCCTCCAAGTTCACG 58.496 43.478 0.00 0.00 0.00 4.35
302 303 6.238211 CGAATCATGTAATCCTCCAAGTTCAC 60.238 42.308 0.00 0.00 0.00 3.18
303 304 5.817296 CGAATCATGTAATCCTCCAAGTTCA 59.183 40.000 0.00 0.00 0.00 3.18
304 305 5.817816 ACGAATCATGTAATCCTCCAAGTTC 59.182 40.000 0.00 0.00 0.00 3.01
305 306 5.745227 ACGAATCATGTAATCCTCCAAGTT 58.255 37.500 0.00 0.00 0.00 2.66
306 307 5.104941 TGACGAATCATGTAATCCTCCAAGT 60.105 40.000 0.00 0.00 0.00 3.16
307 308 5.359756 TGACGAATCATGTAATCCTCCAAG 58.640 41.667 0.00 0.00 0.00 3.61
308 309 5.128663 TCTGACGAATCATGTAATCCTCCAA 59.871 40.000 0.00 0.00 33.22 3.53
309 310 4.649218 TCTGACGAATCATGTAATCCTCCA 59.351 41.667 0.00 0.00 33.22 3.86
310 311 5.201713 TCTGACGAATCATGTAATCCTCC 57.798 43.478 0.00 0.00 33.22 4.30
311 312 7.539712 TTTTCTGACGAATCATGTAATCCTC 57.460 36.000 0.00 0.00 33.22 3.71
312 313 7.066284 CCTTTTTCTGACGAATCATGTAATCCT 59.934 37.037 0.00 0.00 33.22 3.24
313 314 7.065803 TCCTTTTTCTGACGAATCATGTAATCC 59.934 37.037 0.00 0.00 33.22 3.01
314 315 7.974675 TCCTTTTTCTGACGAATCATGTAATC 58.025 34.615 0.00 0.00 33.22 1.75
315 316 7.921786 TCCTTTTTCTGACGAATCATGTAAT 57.078 32.000 0.00 0.00 33.22 1.89
316 317 7.737972 TTCCTTTTTCTGACGAATCATGTAA 57.262 32.000 0.00 0.00 33.22 2.41
317 318 7.606073 TCATTCCTTTTTCTGACGAATCATGTA 59.394 33.333 0.00 0.00 33.22 2.29
318 319 6.430925 TCATTCCTTTTTCTGACGAATCATGT 59.569 34.615 0.00 0.00 33.22 3.21
319 320 6.845302 TCATTCCTTTTTCTGACGAATCATG 58.155 36.000 0.00 0.00 33.22 3.07
320 321 7.636150 ATCATTCCTTTTTCTGACGAATCAT 57.364 32.000 0.00 0.00 33.22 2.45
321 322 7.824289 ACTATCATTCCTTTTTCTGACGAATCA 59.176 33.333 0.00 0.00 0.00 2.57
322 323 8.202745 ACTATCATTCCTTTTTCTGACGAATC 57.797 34.615 0.00 0.00 0.00 2.52
323 324 8.567285 AACTATCATTCCTTTTTCTGACGAAT 57.433 30.769 0.00 0.00 0.00 3.34
324 325 7.979444 AACTATCATTCCTTTTTCTGACGAA 57.021 32.000 0.00 0.00 0.00 3.85
325 326 8.311836 AGTAACTATCATTCCTTTTTCTGACGA 58.688 33.333 0.00 0.00 0.00 4.20
326 327 8.480643 AGTAACTATCATTCCTTTTTCTGACG 57.519 34.615 0.00 0.00 0.00 4.35
357 358 9.672086 CGAGAAACTAAGAATCCTGTTATAGAG 57.328 37.037 0.00 0.00 0.00 2.43
358 359 9.186837 ACGAGAAACTAAGAATCCTGTTATAGA 57.813 33.333 0.00 0.00 0.00 1.98
359 360 9.804758 AACGAGAAACTAAGAATCCTGTTATAG 57.195 33.333 0.00 0.00 0.00 1.31
360 361 9.582431 CAACGAGAAACTAAGAATCCTGTTATA 57.418 33.333 0.00 0.00 0.00 0.98
361 362 7.549488 CCAACGAGAAACTAAGAATCCTGTTAT 59.451 37.037 0.00 0.00 0.00 1.89
362 363 6.872020 CCAACGAGAAACTAAGAATCCTGTTA 59.128 38.462 0.00 0.00 0.00 2.41
363 364 5.701290 CCAACGAGAAACTAAGAATCCTGTT 59.299 40.000 0.00 0.00 0.00 3.16
364 365 5.238583 CCAACGAGAAACTAAGAATCCTGT 58.761 41.667 0.00 0.00 0.00 4.00
365 366 4.631813 CCCAACGAGAAACTAAGAATCCTG 59.368 45.833 0.00 0.00 0.00 3.86
366 367 4.833390 CCCAACGAGAAACTAAGAATCCT 58.167 43.478 0.00 0.00 0.00 3.24
367 368 3.374367 GCCCAACGAGAAACTAAGAATCC 59.626 47.826 0.00 0.00 0.00 3.01
368 369 4.254492 AGCCCAACGAGAAACTAAGAATC 58.746 43.478 0.00 0.00 0.00 2.52
369 370 4.287766 AGCCCAACGAGAAACTAAGAAT 57.712 40.909 0.00 0.00 0.00 2.40
370 371 3.764237 AGCCCAACGAGAAACTAAGAA 57.236 42.857 0.00 0.00 0.00 2.52
371 372 3.556423 GGAAGCCCAACGAGAAACTAAGA 60.556 47.826 0.00 0.00 0.00 2.10
372 373 2.742589 GGAAGCCCAACGAGAAACTAAG 59.257 50.000 0.00 0.00 0.00 2.18
373 374 2.370849 AGGAAGCCCAACGAGAAACTAA 59.629 45.455 0.00 0.00 33.88 2.24
374 375 1.975680 AGGAAGCCCAACGAGAAACTA 59.024 47.619 0.00 0.00 33.88 2.24
375 376 0.765510 AGGAAGCCCAACGAGAAACT 59.234 50.000 0.00 0.00 33.88 2.66
376 377 1.157585 GAGGAAGCCCAACGAGAAAC 58.842 55.000 0.00 0.00 33.88 2.78
377 378 0.320421 CGAGGAAGCCCAACGAGAAA 60.320 55.000 0.00 0.00 36.92 2.52
378 379 1.292223 CGAGGAAGCCCAACGAGAA 59.708 57.895 0.00 0.00 36.92 2.87
379 380 2.646175 CCGAGGAAGCCCAACGAGA 61.646 63.158 0.00 0.00 36.92 4.04
380 381 2.125512 CCGAGGAAGCCCAACGAG 60.126 66.667 0.00 0.00 36.92 4.18
381 382 3.702048 CCCGAGGAAGCCCAACGA 61.702 66.667 0.00 0.00 36.92 3.85
382 383 3.702048 TCCCGAGGAAGCCCAACG 61.702 66.667 0.00 0.00 35.45 4.10
383 384 2.046217 GTCCCGAGGAAGCCCAAC 60.046 66.667 0.00 0.00 31.38 3.77
384 385 1.497309 AATGTCCCGAGGAAGCCCAA 61.497 55.000 0.00 0.00 31.38 4.12
385 386 1.497309 AAATGTCCCGAGGAAGCCCA 61.497 55.000 0.00 0.00 31.38 5.36
386 387 0.323451 AAAATGTCCCGAGGAAGCCC 60.323 55.000 0.00 0.00 31.38 5.19
387 388 1.095600 GAAAATGTCCCGAGGAAGCC 58.904 55.000 0.00 0.00 31.38 4.35
388 389 1.095600 GGAAAATGTCCCGAGGAAGC 58.904 55.000 0.00 0.00 41.10 3.86
420 421 9.286170 CATGAAAGGAAGATCAATGACTCATAT 57.714 33.333 0.00 0.00 0.00 1.78
421 422 7.718314 CCATGAAAGGAAGATCAATGACTCATA 59.282 37.037 0.00 0.00 0.00 2.15
422 423 6.546403 CCATGAAAGGAAGATCAATGACTCAT 59.454 38.462 0.00 0.00 0.00 2.90
423 424 5.884232 CCATGAAAGGAAGATCAATGACTCA 59.116 40.000 0.00 0.00 0.00 3.41
424 425 5.298777 CCCATGAAAGGAAGATCAATGACTC 59.701 44.000 0.00 0.00 0.00 3.36
425 426 5.198965 CCCATGAAAGGAAGATCAATGACT 58.801 41.667 0.00 0.00 0.00 3.41
426 427 4.202090 GCCCATGAAAGGAAGATCAATGAC 60.202 45.833 0.00 0.00 0.00 3.06
427 428 3.956199 GCCCATGAAAGGAAGATCAATGA 59.044 43.478 0.00 0.00 0.00 2.57
428 429 3.069158 GGCCCATGAAAGGAAGATCAATG 59.931 47.826 0.00 0.00 0.00 2.82
429 430 3.303049 GGCCCATGAAAGGAAGATCAAT 58.697 45.455 0.00 0.00 0.00 2.57
430 431 2.624029 GGGCCCATGAAAGGAAGATCAA 60.624 50.000 19.95 0.00 0.00 2.57
431 432 1.063717 GGGCCCATGAAAGGAAGATCA 60.064 52.381 19.95 0.00 0.00 2.92
432 433 1.216427 AGGGCCCATGAAAGGAAGATC 59.784 52.381 27.56 0.00 0.00 2.75
433 434 1.063417 CAGGGCCCATGAAAGGAAGAT 60.063 52.381 27.56 0.00 0.00 2.40
434 435 0.332632 CAGGGCCCATGAAAGGAAGA 59.667 55.000 27.56 0.00 0.00 2.87
435 436 0.040204 ACAGGGCCCATGAAAGGAAG 59.960 55.000 27.56 2.47 0.00 3.46
436 437 1.377690 TACAGGGCCCATGAAAGGAA 58.622 50.000 27.56 0.00 0.00 3.36
437 438 1.607225 ATACAGGGCCCATGAAAGGA 58.393 50.000 27.56 2.81 0.00 3.36
438 439 3.814504 ATATACAGGGCCCATGAAAGG 57.185 47.619 27.56 6.39 0.00 3.11
439 440 4.990526 AGAATATACAGGGCCCATGAAAG 58.009 43.478 27.56 8.70 0.00 2.62
440 441 5.103728 TGAAGAATATACAGGGCCCATGAAA 60.104 40.000 27.56 12.97 0.00 2.69
441 442 4.415179 TGAAGAATATACAGGGCCCATGAA 59.585 41.667 27.56 6.57 0.00 2.57
442 443 3.980022 TGAAGAATATACAGGGCCCATGA 59.020 43.478 27.56 8.50 0.00 3.07
443 444 4.371624 TGAAGAATATACAGGGCCCATG 57.628 45.455 27.56 21.21 0.00 3.66
444 445 5.044846 GGTATGAAGAATATACAGGGCCCAT 60.045 44.000 27.56 14.91 33.66 4.00
445 446 4.288626 GGTATGAAGAATATACAGGGCCCA 59.711 45.833 27.56 2.74 33.66 5.36
446 447 4.288626 TGGTATGAAGAATATACAGGGCCC 59.711 45.833 16.46 16.46 33.66 5.80
447 448 5.499004 TGGTATGAAGAATATACAGGGCC 57.501 43.478 0.00 0.00 33.66 5.80
448 449 6.599638 GGAATGGTATGAAGAATATACAGGGC 59.400 42.308 0.00 0.00 33.66 5.19
449 450 7.922382 AGGAATGGTATGAAGAATATACAGGG 58.078 38.462 0.00 0.00 33.66 4.45
462 463 9.832445 GAGTTCTGTATTTTAGGAATGGTATGA 57.168 33.333 0.00 0.00 0.00 2.15
463 464 9.838339 AGAGTTCTGTATTTTAGGAATGGTATG 57.162 33.333 0.00 0.00 0.00 2.39
480 481 9.899226 GTGCTTAAATCATTTTTAGAGTTCTGT 57.101 29.630 0.00 0.00 0.00 3.41
481 482 9.897744 TGTGCTTAAATCATTTTTAGAGTTCTG 57.102 29.630 0.00 0.00 0.00 3.02
491 492 9.072294 GCGTAGTTATTGTGCTTAAATCATTTT 57.928 29.630 0.00 0.00 0.00 1.82
492 493 7.700656 GGCGTAGTTATTGTGCTTAAATCATTT 59.299 33.333 0.00 0.00 0.00 2.32
493 494 7.148154 TGGCGTAGTTATTGTGCTTAAATCATT 60.148 33.333 0.00 0.00 0.00 2.57
494 495 6.317642 TGGCGTAGTTATTGTGCTTAAATCAT 59.682 34.615 0.00 0.00 0.00 2.45
495 496 5.644206 TGGCGTAGTTATTGTGCTTAAATCA 59.356 36.000 0.00 0.00 0.00 2.57
496 497 6.114221 TGGCGTAGTTATTGTGCTTAAATC 57.886 37.500 0.00 0.00 0.00 2.17
497 498 6.150474 ACTTGGCGTAGTTATTGTGCTTAAAT 59.850 34.615 0.00 0.00 0.00 1.40
498 499 5.470777 ACTTGGCGTAGTTATTGTGCTTAAA 59.529 36.000 0.00 0.00 0.00 1.52
499 500 4.998672 ACTTGGCGTAGTTATTGTGCTTAA 59.001 37.500 0.00 0.00 0.00 1.85
500 501 4.571919 ACTTGGCGTAGTTATTGTGCTTA 58.428 39.130 0.00 0.00 0.00 3.09
501 502 3.408634 ACTTGGCGTAGTTATTGTGCTT 58.591 40.909 0.00 0.00 0.00 3.91
502 503 3.053831 ACTTGGCGTAGTTATTGTGCT 57.946 42.857 0.00 0.00 0.00 4.40
503 504 3.930848 AGTACTTGGCGTAGTTATTGTGC 59.069 43.478 0.00 0.00 0.00 4.57
504 505 7.766219 AATAGTACTTGGCGTAGTTATTGTG 57.234 36.000 0.00 0.00 33.81 3.33
505 506 8.782339 AAAATAGTACTTGGCGTAGTTATTGT 57.218 30.769 0.00 0.00 33.81 2.71
508 509 9.023967 CGTTAAAATAGTACTTGGCGTAGTTAT 57.976 33.333 0.00 0.00 33.81 1.89
509 510 7.009174 GCGTTAAAATAGTACTTGGCGTAGTTA 59.991 37.037 0.00 0.00 33.81 2.24
510 511 6.183360 GCGTTAAAATAGTACTTGGCGTAGTT 60.183 38.462 0.00 0.00 33.81 2.24
511 512 5.289434 GCGTTAAAATAGTACTTGGCGTAGT 59.711 40.000 0.00 0.00 35.88 2.73
512 513 5.289193 TGCGTTAAAATAGTACTTGGCGTAG 59.711 40.000 0.00 0.00 0.00 3.51
513 514 5.167121 TGCGTTAAAATAGTACTTGGCGTA 58.833 37.500 0.00 0.00 0.00 4.42
514 515 3.995705 TGCGTTAAAATAGTACTTGGCGT 59.004 39.130 0.00 0.00 0.00 5.68
515 516 4.587211 TGCGTTAAAATAGTACTTGGCG 57.413 40.909 0.00 0.00 0.00 5.69
516 517 5.329493 CCTTGCGTTAAAATAGTACTTGGC 58.671 41.667 0.00 0.00 0.00 4.52
517 518 5.123344 AGCCTTGCGTTAAAATAGTACTTGG 59.877 40.000 0.00 0.00 0.00 3.61
518 519 6.178239 AGCCTTGCGTTAAAATAGTACTTG 57.822 37.500 0.00 0.00 0.00 3.16
519 520 6.812879 AAGCCTTGCGTTAAAATAGTACTT 57.187 33.333 0.00 0.00 0.00 2.24
520 521 6.608610 CAAAGCCTTGCGTTAAAATAGTACT 58.391 36.000 0.00 0.00 0.00 2.73
521 522 6.848470 CAAAGCCTTGCGTTAAAATAGTAC 57.152 37.500 0.00 0.00 0.00 2.73
539 540 1.244019 AAGACCCGATGTGGCAAAGC 61.244 55.000 0.00 0.00 35.87 3.51
540 541 1.247567 AAAGACCCGATGTGGCAAAG 58.752 50.000 0.00 0.00 35.87 2.77
541 542 1.698506 AAAAGACCCGATGTGGCAAA 58.301 45.000 0.00 0.00 35.87 3.68
542 543 2.554893 GTTAAAAGACCCGATGTGGCAA 59.445 45.455 0.00 0.00 35.87 4.52
543 544 2.156098 GTTAAAAGACCCGATGTGGCA 58.844 47.619 0.00 0.00 35.87 4.92
544 545 2.161609 CAGTTAAAAGACCCGATGTGGC 59.838 50.000 0.00 0.00 35.87 5.01
545 546 3.670625 TCAGTTAAAAGACCCGATGTGG 58.329 45.455 0.00 0.00 37.55 4.17
546 547 5.682943 TTTCAGTTAAAAGACCCGATGTG 57.317 39.130 0.00 0.00 0.00 3.21
547 548 5.335661 GCATTTCAGTTAAAAGACCCGATGT 60.336 40.000 0.00 0.00 0.00 3.06
548 549 5.095490 GCATTTCAGTTAAAAGACCCGATG 58.905 41.667 0.00 0.00 0.00 3.84
549 550 4.764823 TGCATTTCAGTTAAAAGACCCGAT 59.235 37.500 0.00 0.00 0.00 4.18
550 551 4.138290 TGCATTTCAGTTAAAAGACCCGA 58.862 39.130 0.00 0.00 0.00 5.14
551 552 4.497473 TGCATTTCAGTTAAAAGACCCG 57.503 40.909 0.00 0.00 0.00 5.28
552 553 6.024552 TGATGCATTTCAGTTAAAAGACCC 57.975 37.500 0.00 0.00 0.00 4.46
553 554 7.276438 GGATTGATGCATTTCAGTTAAAAGACC 59.724 37.037 0.00 0.00 0.00 3.85
554 555 7.814107 TGGATTGATGCATTTCAGTTAAAAGAC 59.186 33.333 0.00 0.00 0.00 3.01
555 556 7.814107 GTGGATTGATGCATTTCAGTTAAAAGA 59.186 33.333 0.00 0.00 0.00 2.52
556 557 7.201376 CGTGGATTGATGCATTTCAGTTAAAAG 60.201 37.037 0.00 0.00 0.00 2.27
557 558 6.585702 CGTGGATTGATGCATTTCAGTTAAAA 59.414 34.615 0.00 0.00 0.00 1.52
558 559 6.072230 TCGTGGATTGATGCATTTCAGTTAAA 60.072 34.615 0.00 0.00 0.00 1.52
559 560 5.414144 TCGTGGATTGATGCATTTCAGTTAA 59.586 36.000 0.00 0.00 0.00 2.01
560 561 4.940654 TCGTGGATTGATGCATTTCAGTTA 59.059 37.500 0.00 0.00 0.00 2.24
561 562 3.758023 TCGTGGATTGATGCATTTCAGTT 59.242 39.130 0.00 0.00 0.00 3.16
562 563 3.346315 TCGTGGATTGATGCATTTCAGT 58.654 40.909 0.00 0.00 0.00 3.41
563 564 4.563337 ATCGTGGATTGATGCATTTCAG 57.437 40.909 0.00 0.00 0.00 3.02
564 565 5.125356 AGTATCGTGGATTGATGCATTTCA 58.875 37.500 0.00 0.00 31.74 2.69
565 566 5.679734 AGTATCGTGGATTGATGCATTTC 57.320 39.130 0.00 0.00 31.74 2.17
566 567 6.291377 ACTAGTATCGTGGATTGATGCATTT 58.709 36.000 0.00 0.00 31.74 2.32
567 568 5.858381 ACTAGTATCGTGGATTGATGCATT 58.142 37.500 0.00 0.00 31.74 3.56
568 569 5.474578 ACTAGTATCGTGGATTGATGCAT 57.525 39.130 0.00 0.00 31.74 3.96
569 570 4.937201 ACTAGTATCGTGGATTGATGCA 57.063 40.909 0.00 0.00 31.74 3.96
570 571 5.047943 AGGTACTAGTATCGTGGATTGATGC 60.048 44.000 5.75 0.00 36.02 3.91
571 572 6.382608 CAGGTACTAGTATCGTGGATTGATG 58.617 44.000 5.75 0.00 36.02 3.07
572 573 5.047943 GCAGGTACTAGTATCGTGGATTGAT 60.048 44.000 5.75 0.00 36.02 2.57
573 574 4.277672 GCAGGTACTAGTATCGTGGATTGA 59.722 45.833 5.75 0.00 36.02 2.57
574 575 4.278669 AGCAGGTACTAGTATCGTGGATTG 59.721 45.833 5.75 0.00 36.02 2.67
575 576 4.471548 AGCAGGTACTAGTATCGTGGATT 58.528 43.478 5.75 0.00 36.02 3.01
576 577 4.073549 GAGCAGGTACTAGTATCGTGGAT 58.926 47.826 5.75 0.00 36.02 3.41
577 578 3.136077 AGAGCAGGTACTAGTATCGTGGA 59.864 47.826 5.75 0.00 36.02 4.02
578 579 3.478509 AGAGCAGGTACTAGTATCGTGG 58.521 50.000 5.75 2.30 36.02 4.94
579 580 5.055144 TGTAGAGCAGGTACTAGTATCGTG 58.945 45.833 5.75 11.93 36.02 4.35
580 581 5.287674 TGTAGAGCAGGTACTAGTATCGT 57.712 43.478 5.75 0.00 36.02 3.73
581 582 6.651643 AGATTGTAGAGCAGGTACTAGTATCG 59.348 42.308 5.75 3.48 36.02 2.92
582 583 7.662258 TGAGATTGTAGAGCAGGTACTAGTATC 59.338 40.741 5.75 5.31 36.02 2.24
583 584 7.519057 TGAGATTGTAGAGCAGGTACTAGTAT 58.481 38.462 5.75 0.00 36.02 2.12
584 585 6.896883 TGAGATTGTAGAGCAGGTACTAGTA 58.103 40.000 0.00 0.00 36.02 1.82
585 586 5.756918 TGAGATTGTAGAGCAGGTACTAGT 58.243 41.667 0.00 0.00 36.02 2.57
586 587 5.825679 ACTGAGATTGTAGAGCAGGTACTAG 59.174 44.000 0.00 0.00 36.02 2.57
587 588 5.590663 CACTGAGATTGTAGAGCAGGTACTA 59.409 44.000 0.00 0.00 36.02 1.82
588 589 4.400884 CACTGAGATTGTAGAGCAGGTACT 59.599 45.833 0.00 0.00 43.88 2.73
589 590 4.440802 CCACTGAGATTGTAGAGCAGGTAC 60.441 50.000 0.00 0.00 0.00 3.34
590 591 3.701542 CCACTGAGATTGTAGAGCAGGTA 59.298 47.826 0.00 0.00 0.00 3.08
591 592 2.499289 CCACTGAGATTGTAGAGCAGGT 59.501 50.000 0.00 0.00 0.00 4.00
592 593 2.499289 ACCACTGAGATTGTAGAGCAGG 59.501 50.000 0.00 0.00 0.00 4.85
593 594 3.883830 ACCACTGAGATTGTAGAGCAG 57.116 47.619 0.00 0.00 0.00 4.24
594 595 5.738619 TTAACCACTGAGATTGTAGAGCA 57.261 39.130 0.00 0.00 0.00 4.26
595 596 6.341316 TCATTAACCACTGAGATTGTAGAGC 58.659 40.000 0.00 0.00 0.00 4.09
596 597 7.042187 GCATCATTAACCACTGAGATTGTAGAG 60.042 40.741 0.00 0.00 0.00 2.43
597 598 6.763135 GCATCATTAACCACTGAGATTGTAGA 59.237 38.462 0.00 0.00 0.00 2.59
598 599 6.539826 TGCATCATTAACCACTGAGATTGTAG 59.460 38.462 0.00 0.00 0.00 2.74
599 600 6.413892 TGCATCATTAACCACTGAGATTGTA 58.586 36.000 0.00 0.00 0.00 2.41
600 601 5.255687 TGCATCATTAACCACTGAGATTGT 58.744 37.500 0.00 0.00 0.00 2.71
601 602 5.823209 TGCATCATTAACCACTGAGATTG 57.177 39.130 0.00 0.00 0.00 2.67
602 603 5.889853 ACATGCATCATTAACCACTGAGATT 59.110 36.000 0.00 0.00 0.00 2.40
603 604 5.443283 ACATGCATCATTAACCACTGAGAT 58.557 37.500 0.00 0.00 0.00 2.75
604 605 4.847198 ACATGCATCATTAACCACTGAGA 58.153 39.130 0.00 0.00 0.00 3.27
605 606 4.637091 TGACATGCATCATTAACCACTGAG 59.363 41.667 0.00 0.00 0.00 3.35
606 607 4.587891 TGACATGCATCATTAACCACTGA 58.412 39.130 0.00 0.00 0.00 3.41
607 608 4.397103 ACTGACATGCATCATTAACCACTG 59.603 41.667 0.00 0.00 0.00 3.66
608 609 4.592942 ACTGACATGCATCATTAACCACT 58.407 39.130 0.00 0.00 0.00 4.00
609 610 4.970662 ACTGACATGCATCATTAACCAC 57.029 40.909 0.00 0.00 0.00 4.16
610 611 6.355747 TCATACTGACATGCATCATTAACCA 58.644 36.000 0.00 0.00 0.00 3.67
611 612 6.866010 TCATACTGACATGCATCATTAACC 57.134 37.500 0.00 0.00 0.00 2.85
612 613 7.868775 ACATCATACTGACATGCATCATTAAC 58.131 34.615 0.00 0.00 0.00 2.01
613 614 8.454570 AACATCATACTGACATGCATCATTAA 57.545 30.769 0.00 0.00 0.00 1.40
614 615 9.729281 ATAACATCATACTGACATGCATCATTA 57.271 29.630 0.00 0.00 0.00 1.90
615 616 6.954487 AACATCATACTGACATGCATCATT 57.046 33.333 0.00 0.00 0.00 2.57
616 617 8.631480 AATAACATCATACTGACATGCATCAT 57.369 30.769 0.00 0.00 0.00 2.45
617 618 9.558396 TTAATAACATCATACTGACATGCATCA 57.442 29.630 0.00 0.00 0.00 3.07
619 620 8.509690 GCTTAATAACATCATACTGACATGCAT 58.490 33.333 0.00 0.00 0.00 3.96
620 621 7.716560 AGCTTAATAACATCATACTGACATGCA 59.283 33.333 0.00 0.00 0.00 3.96
621 622 8.092521 AGCTTAATAACATCATACTGACATGC 57.907 34.615 0.00 0.00 0.00 4.06
624 625 9.208022 GCATAGCTTAATAACATCATACTGACA 57.792 33.333 0.00 0.00 0.00 3.58
625 626 9.208022 TGCATAGCTTAATAACATCATACTGAC 57.792 33.333 0.00 0.00 0.00 3.51
626 627 9.777297 TTGCATAGCTTAATAACATCATACTGA 57.223 29.630 0.00 0.00 0.00 3.41
627 628 9.817365 GTTGCATAGCTTAATAACATCATACTG 57.183 33.333 0.00 0.00 0.00 2.74
628 629 9.784531 AGTTGCATAGCTTAATAACATCATACT 57.215 29.630 0.00 0.00 0.00 2.12
631 632 8.915057 AGAGTTGCATAGCTTAATAACATCAT 57.085 30.769 0.00 0.00 0.00 2.45
632 633 8.737168 AAGAGTTGCATAGCTTAATAACATCA 57.263 30.769 0.00 0.00 0.00 3.07
644 645 9.937175 CCTAAGTTAATAAAAGAGTTGCATAGC 57.063 33.333 0.00 0.00 0.00 2.97
1871 1887 1.406539 CCCGCATTGAAAATCCTCCTG 59.593 52.381 0.00 0.00 0.00 3.86
1893 1909 9.202273 GGTGCTAGAGAGAGATATGTTTTTATG 57.798 37.037 0.00 0.00 0.00 1.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.