Multiple sequence alignment - TraesCS1D01G432400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G432400 chr1D 100.000 2584 0 0 1 2584 482216441 482219024 0.000000e+00 4772.0
1 TraesCS1D01G432400 chr1A 85.807 1846 112 71 313 2080 578921555 578923328 0.000000e+00 1820.0
2 TraesCS1D01G432400 chr1A 93.375 317 13 2 1 317 578917798 578918106 1.810000e-126 462.0
3 TraesCS1D01G432400 chr1A 93.182 44 2 1 2341 2383 28387007 28387050 2.150000e-06 63.9
4 TraesCS1D01G432400 chr1B 89.920 1121 56 25 996 2091 670783616 670784704 0.000000e+00 1391.0
5 TraesCS1D01G432400 chr1B 80.198 303 48 9 2 297 633321562 633321859 1.560000e-52 217.0
6 TraesCS1D01G432400 chr1B 79.808 312 48 7 16 316 240503224 240503531 2.010000e-51 213.0
7 TraesCS1D01G432400 chr2B 91.282 195 14 2 2121 2314 768538860 768539052 1.970000e-66 263.0
8 TraesCS1D01G432400 chr2D 91.099 191 16 1 2122 2312 487273591 487273780 9.170000e-65 257.0
9 TraesCS1D01G432400 chr2D 91.053 190 15 1 2126 2313 549605175 549605364 3.300000e-64 255.0
10 TraesCS1D01G432400 chr2D 90.526 190 16 1 2126 2313 550066585 550066774 1.540000e-62 250.0
11 TraesCS1D01G432400 chr5A 91.005 189 15 2 2126 2312 552159575 552159763 1.190000e-63 254.0
12 TraesCS1D01G432400 chr5A 90.674 193 15 2 2124 2314 670102749 670102558 1.190000e-63 254.0
13 TraesCS1D01G432400 chr5A 88.500 200 21 1 2115 2312 464170103 464169904 9.240000e-60 241.0
14 TraesCS1D01G432400 chr3D 90.576 191 14 4 2122 2310 597396923 597397111 1.540000e-62 250.0
15 TraesCS1D01G432400 chr6D 90.476 189 14 3 2127 2312 100795804 100795991 1.990000e-61 246.0
16 TraesCS1D01G432400 chr3A 79.868 303 52 8 2 302 569953520 569953815 2.010000e-51 213.0
17 TraesCS1D01G432400 chr4D 79.630 324 41 17 2 316 484411969 484412276 2.610000e-50 209.0
18 TraesCS1D01G432400 chr4D 79.667 300 48 8 2 295 402825416 402825124 1.210000e-48 204.0
19 TraesCS1D01G432400 chr4B 79.599 299 51 6 2 295 498930783 498930490 3.370000e-49 206.0
20 TraesCS1D01G432400 chr4B 78.507 335 45 17 3 317 671695309 671694982 7.300000e-46 195.0
21 TraesCS1D01G432400 chr5B 79.322 295 43 11 16 297 356715672 356715961 9.440000e-45 191.0
22 TraesCS1D01G432400 chr5B 100.000 29 0 0 2341 2369 380982603 380982575 1.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G432400 chr1D 482216441 482219024 2583 False 4772 4772 100.000 1 2584 1 chr1D.!!$F1 2583
1 TraesCS1D01G432400 chr1A 578917798 578923328 5530 False 1141 1820 89.591 1 2080 2 chr1A.!!$F2 2079
2 TraesCS1D01G432400 chr1B 670783616 670784704 1088 False 1391 1391 89.920 996 2091 1 chr1B.!!$F3 1095

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
884 4372 0.179094 TCCACCTATAAACAGGCGCG 60.179 55.0 0.0 0.0 39.53 6.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2517 6080 0.033503 TGGCTCAGAGGGATACGTGA 60.034 55.0 0.0 0.0 37.6 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
57 58 6.229561 TGCCGCATAAAAATAAAAACCAAC 57.770 33.333 0.00 0.00 0.00 3.77
59 60 6.073548 TGCCGCATAAAAATAAAAACCAACAG 60.074 34.615 0.00 0.00 0.00 3.16
112 113 9.218440 ACCAAATCAATATTTCATCAAAACCAC 57.782 29.630 0.00 0.00 32.87 4.16
123 124 4.731720 CATCAAAACCACGTGATGCATTA 58.268 39.130 19.30 0.00 43.30 1.90
173 174 9.528018 TGACCAAAATCTCAACTAAATCAAAAC 57.472 29.630 0.00 0.00 0.00 2.43
174 175 9.750125 GACCAAAATCTCAACTAAATCAAAACT 57.250 29.630 0.00 0.00 0.00 2.66
193 194 8.987890 TCAAAACTTTTATTGCCTTTCAATAGC 58.012 29.630 0.00 0.00 45.42 2.97
196 197 7.186570 ACTTTTATTGCCTTTCAATAGCCAT 57.813 32.000 0.00 0.00 45.42 4.40
201 202 2.243478 TGCCTTTCAATAGCCATACCCA 59.757 45.455 0.00 0.00 0.00 4.51
322 3776 8.991243 TTGATACGTGTAAGTTATATATGCCC 57.009 34.615 0.00 0.00 0.00 5.36
324 3778 4.813027 ACGTGTAAGTTATATATGCCCCG 58.187 43.478 0.00 0.00 0.00 5.73
326 3780 3.937079 GTGTAAGTTATATATGCCCCGCC 59.063 47.826 0.00 0.00 0.00 6.13
328 3782 1.272807 AGTTATATATGCCCCGCCGT 58.727 50.000 0.00 0.00 0.00 5.68
345 3799 1.350665 GTAGCGCACGGGCAAATAC 59.649 57.895 11.77 5.20 41.24 1.89
359 3813 7.660208 CACGGGCAAATACCTAGTATAGAAAAT 59.340 37.037 0.00 0.00 42.77 1.82
518 3975 1.082756 GCACTTTGGACTTGCGTCG 60.083 57.895 0.00 0.00 41.16 5.12
522 3979 0.234884 CTTTGGACTTGCGTCGGTTC 59.765 55.000 0.00 0.00 41.16 3.62
551 4008 3.422303 GCGATCGGTGCAGTGCAA 61.422 61.111 21.67 4.60 41.47 4.08
671 4132 3.694566 CCTTTCCCTTTCCCGTTATCAAG 59.305 47.826 0.00 0.00 0.00 3.02
678 4139 1.961133 TCCCGTTATCAAGTTCCCCT 58.039 50.000 0.00 0.00 0.00 4.79
694 4155 4.127040 CTCGCCGCAGCTCAGACT 62.127 66.667 0.00 0.00 36.60 3.24
698 4183 2.505777 CCGCAGCTCAGACTCACG 60.506 66.667 0.00 0.00 0.00 4.35
715 4200 1.002468 CACGCAACCCAGAAACTTCAG 60.002 52.381 0.00 0.00 0.00 3.02
760 4248 0.794473 GCCAAGTTGCACGTAGTACC 59.206 55.000 0.00 0.00 41.61 3.34
766 4254 1.459592 GTTGCACGTAGTACCAGCAAG 59.540 52.381 20.94 0.00 44.73 4.01
780 4268 5.966742 ACCAGCAAGACTCTTAAAAATCC 57.033 39.130 0.00 0.00 0.00 3.01
798 4286 1.944676 CCACTCGGATTCTACGCGC 60.945 63.158 5.73 0.00 0.00 6.86
799 4287 1.944676 CACTCGGATTCTACGCGCC 60.945 63.158 5.73 0.00 0.00 6.53
800 4288 2.354773 CTCGGATTCTACGCGCCC 60.355 66.667 5.73 0.00 0.00 6.13
801 4289 3.843117 CTCGGATTCTACGCGCCCC 62.843 68.421 5.73 0.00 0.00 5.80
802 4290 4.963428 CGGATTCTACGCGCCCCC 62.963 72.222 5.73 0.00 0.00 5.40
803 4291 3.547513 GGATTCTACGCGCCCCCT 61.548 66.667 5.73 0.00 0.00 4.79
804 4292 2.280186 GATTCTACGCGCCCCCTG 60.280 66.667 5.73 0.00 0.00 4.45
805 4293 4.547367 ATTCTACGCGCCCCCTGC 62.547 66.667 5.73 0.00 0.00 4.85
884 4372 0.179094 TCCACCTATAAACAGGCGCG 60.179 55.000 0.00 0.00 39.53 6.86
900 4388 2.867472 CGCCGCGATGTTTCCTTT 59.133 55.556 8.23 0.00 0.00 3.11
919 4407 0.321475 TGCGTGCTTCATCCATCACA 60.321 50.000 0.00 0.00 0.00 3.58
920 4408 1.019673 GCGTGCTTCATCCATCACAT 58.980 50.000 0.00 0.00 0.00 3.21
921 4409 1.003116 GCGTGCTTCATCCATCACATC 60.003 52.381 0.00 0.00 0.00 3.06
923 4411 2.646930 GTGCTTCATCCATCACATCCA 58.353 47.619 0.00 0.00 0.00 3.41
924 4412 2.617308 GTGCTTCATCCATCACATCCAG 59.383 50.000 0.00 0.00 0.00 3.86
925 4413 2.506644 TGCTTCATCCATCACATCCAGA 59.493 45.455 0.00 0.00 0.00 3.86
926 4414 3.137728 TGCTTCATCCATCACATCCAGAT 59.862 43.478 0.00 0.00 0.00 2.90
927 4415 3.752222 GCTTCATCCATCACATCCAGATC 59.248 47.826 0.00 0.00 0.00 2.75
928 4416 3.672767 TCATCCATCACATCCAGATCG 57.327 47.619 0.00 0.00 0.00 3.69
929 4417 3.233507 TCATCCATCACATCCAGATCGA 58.766 45.455 0.00 0.00 0.00 3.59
930 4418 3.642848 TCATCCATCACATCCAGATCGAA 59.357 43.478 0.00 0.00 0.00 3.71
931 4419 4.101430 TCATCCATCACATCCAGATCGAAA 59.899 41.667 0.00 0.00 0.00 3.46
932 4420 3.797039 TCCATCACATCCAGATCGAAAC 58.203 45.455 0.00 0.00 0.00 2.78
933 4421 3.452264 TCCATCACATCCAGATCGAAACT 59.548 43.478 0.00 0.00 0.00 2.66
934 4422 4.649218 TCCATCACATCCAGATCGAAACTA 59.351 41.667 0.00 0.00 0.00 2.24
937 4425 5.914898 TCACATCCAGATCGAAACTAGAA 57.085 39.130 0.00 0.00 0.00 2.10
940 4428 4.160439 ACATCCAGATCGAAACTAGAAGCA 59.840 41.667 0.00 0.00 0.00 3.91
944 4432 4.142271 CCAGATCGAAACTAGAAGCAGAGT 60.142 45.833 0.00 0.00 0.00 3.24
945 4433 5.066634 CCAGATCGAAACTAGAAGCAGAGTA 59.933 44.000 0.00 0.00 0.00 2.59
958 4446 3.761897 AGCAGAGTAATCGAGCTAGGAT 58.238 45.455 10.67 0.00 33.06 3.24
959 4447 4.148838 AGCAGAGTAATCGAGCTAGGATT 58.851 43.478 14.75 14.75 37.79 3.01
960 4448 4.022416 AGCAGAGTAATCGAGCTAGGATTG 60.022 45.833 18.17 6.98 35.78 2.67
962 4450 5.508153 GCAGAGTAATCGAGCTAGGATTGAA 60.508 44.000 18.17 1.87 35.78 2.69
986 4484 1.366435 AGGAGGGGAGGAAGAAGCTTA 59.634 52.381 0.00 0.00 0.00 3.09
991 4489 0.840617 GGAGGAAGAAGCTTAGGGGG 59.159 60.000 0.00 0.00 0.00 5.40
1222 4727 3.941483 CGGCAAGTAAGTTCCATCTTCAT 59.059 43.478 0.00 0.00 0.00 2.57
1223 4728 4.201851 CGGCAAGTAAGTTCCATCTTCATG 60.202 45.833 0.00 0.00 0.00 3.07
1224 4729 4.943705 GGCAAGTAAGTTCCATCTTCATGA 59.056 41.667 0.00 0.00 30.57 3.07
1236 4741 5.904169 TCCATCTTCATGATCTTCTTCCTCT 59.096 40.000 0.00 0.00 32.05 3.69
1237 4742 6.041865 TCCATCTTCATGATCTTCTTCCTCTC 59.958 42.308 0.00 0.00 32.05 3.20
1238 4743 6.183360 CCATCTTCATGATCTTCTTCCTCTCA 60.183 42.308 0.00 0.00 32.05 3.27
1240 4745 7.434927 TCTTCATGATCTTCTTCCTCTCATT 57.565 36.000 0.00 0.00 0.00 2.57
1241 4746 8.544687 TCTTCATGATCTTCTTCCTCTCATTA 57.455 34.615 0.00 0.00 0.00 1.90
1256 4761 5.525012 CCTCTCATTAATTTGCACGATGAGA 59.475 40.000 18.07 18.07 46.13 3.27
1257 4762 6.204301 CCTCTCATTAATTTGCACGATGAGAT 59.796 38.462 18.84 0.00 46.69 2.75
1258 4763 7.386025 CCTCTCATTAATTTGCACGATGAGATA 59.614 37.037 18.84 6.33 46.69 1.98
1403 4928 2.938838 CCCTACGACTTCCTCATCTCT 58.061 52.381 0.00 0.00 0.00 3.10
1415 4940 5.077369 TCCTCATCTCTCTCATGAAGGAT 57.923 43.478 4.69 0.39 29.67 3.24
1505 5030 1.218047 CTTCACCATCCCGCTCGAA 59.782 57.895 0.00 0.00 0.00 3.71
1637 5169 1.341209 CATCCGCATGCCTGTACTCTA 59.659 52.381 13.15 0.00 0.00 2.43
1638 5170 0.744874 TCCGCATGCCTGTACTCTAC 59.255 55.000 13.15 0.00 0.00 2.59
1640 5172 0.595053 CGCATGCCTGTACTCTACCG 60.595 60.000 13.15 0.00 0.00 4.02
1641 5173 0.460311 GCATGCCTGTACTCTACCGT 59.540 55.000 6.36 0.00 0.00 4.83
1642 5174 1.134788 GCATGCCTGTACTCTACCGTT 60.135 52.381 6.36 0.00 0.00 4.44
1717 5257 8.682016 CGATAAATTTCGTCAAATTAAGATGCC 58.318 33.333 0.00 0.00 40.68 4.40
1765 5311 1.202794 TGCTTGTTGCCATCAGACTCA 60.203 47.619 0.00 0.00 42.00 3.41
1766 5312 2.089980 GCTTGTTGCCATCAGACTCAT 58.910 47.619 0.00 0.00 35.15 2.90
1768 5314 2.118313 TGTTGCCATCAGACTCATGG 57.882 50.000 0.00 0.00 43.47 3.66
1771 5317 1.278537 TGCCATCAGACTCATGGTCA 58.721 50.000 7.26 3.06 46.72 4.02
1799 5345 5.358298 AAATTAACGCAGACTCCTTCAAC 57.642 39.130 0.00 0.00 0.00 3.18
1851 5399 0.930310 CACGTATCGTTGATGCAGGG 59.070 55.000 0.00 0.00 38.32 4.45
1880 5428 1.335597 GCATCTATAGTGGCGTACGCA 60.336 52.381 37.99 22.91 44.11 5.24
1881 5429 2.585845 CATCTATAGTGGCGTACGCAG 58.414 52.381 37.99 25.96 44.11 5.18
1889 5437 1.286354 TGGCGTACGCAGTTGCTAAC 61.286 55.000 37.99 19.58 37.78 2.34
1909 5457 5.991328 AACAGCATCTTCAACGGTATATG 57.009 39.130 0.00 0.00 0.00 1.78
1911 5459 6.156748 ACAGCATCTTCAACGGTATATGTA 57.843 37.500 0.00 0.00 0.00 2.29
1948 5496 2.095969 CGGCTGTCGCATCAAACTTTTA 60.096 45.455 0.00 0.00 38.10 1.52
1949 5497 3.426159 CGGCTGTCGCATCAAACTTTTAT 60.426 43.478 0.00 0.00 38.10 1.40
1951 5499 5.636837 GGCTGTCGCATCAAACTTTTATTA 58.363 37.500 0.00 0.00 38.10 0.98
1952 5500 5.739161 GGCTGTCGCATCAAACTTTTATTAG 59.261 40.000 0.00 0.00 38.10 1.73
1953 5501 6.314784 GCTGTCGCATCAAACTTTTATTAGT 58.685 36.000 0.00 0.00 35.78 2.24
1954 5502 6.249260 GCTGTCGCATCAAACTTTTATTAGTG 59.751 38.462 0.00 0.00 35.78 2.74
1955 5503 7.428282 TGTCGCATCAAACTTTTATTAGTGA 57.572 32.000 0.00 0.00 0.00 3.41
1956 5504 8.039603 TGTCGCATCAAACTTTTATTAGTGAT 57.960 30.769 0.00 0.00 0.00 3.06
1957 5505 9.157104 TGTCGCATCAAACTTTTATTAGTGATA 57.843 29.630 0.00 0.00 0.00 2.15
1958 5506 9.422196 GTCGCATCAAACTTTTATTAGTGATAC 57.578 33.333 0.00 0.00 0.00 2.24
1959 5507 8.325282 TCGCATCAAACTTTTATTAGTGATACG 58.675 33.333 0.00 0.00 0.00 3.06
1960 5508 8.325282 CGCATCAAACTTTTATTAGTGATACGA 58.675 33.333 0.00 0.00 27.27 3.43
1961 5509 9.982291 GCATCAAACTTTTATTAGTGATACGAA 57.018 29.630 0.00 0.00 0.00 3.85
1964 5512 9.409312 TCAAACTTTTATTAGTGATACGAACGA 57.591 29.630 0.14 0.00 0.00 3.85
1965 5513 9.456797 CAAACTTTTATTAGTGATACGAACGAC 57.543 33.333 0.14 0.00 0.00 4.34
1966 5514 8.746922 AACTTTTATTAGTGATACGAACGACA 57.253 30.769 0.14 0.00 0.00 4.35
1967 5515 8.746922 ACTTTTATTAGTGATACGAACGACAA 57.253 30.769 0.14 0.00 0.00 3.18
1968 5516 9.195411 ACTTTTATTAGTGATACGAACGACAAA 57.805 29.630 0.14 0.00 0.00 2.83
1970 5518 9.796062 TTTTATTAGTGATACGAACGACAAAAC 57.204 29.630 0.14 0.00 0.00 2.43
1971 5519 8.518151 TTATTAGTGATACGAACGACAAAACA 57.482 30.769 0.14 0.00 0.00 2.83
1972 5520 4.966850 AGTGATACGAACGACAAAACAG 57.033 40.909 0.14 0.00 0.00 3.16
1973 5521 4.365723 AGTGATACGAACGACAAAACAGT 58.634 39.130 0.14 0.00 0.00 3.55
1999 5562 1.653094 AAGCAGAGGACGCGAGAGAG 61.653 60.000 15.93 0.00 0.00 3.20
2050 5613 0.462047 AAAATAGAGACGCGGGGCTG 60.462 55.000 14.88 0.00 0.00 4.85
2107 5670 3.272439 CAAGCATTGTGTACTGTGTGG 57.728 47.619 0.00 0.00 42.34 4.17
2108 5671 1.896220 AGCATTGTGTACTGTGTGGG 58.104 50.000 0.00 0.00 0.00 4.61
2109 5672 0.881118 GCATTGTGTACTGTGTGGGG 59.119 55.000 0.00 0.00 0.00 4.96
2110 5673 1.544537 GCATTGTGTACTGTGTGGGGA 60.545 52.381 0.00 0.00 0.00 4.81
2111 5674 2.151202 CATTGTGTACTGTGTGGGGAC 58.849 52.381 0.00 0.00 0.00 4.46
2112 5675 1.205055 TTGTGTACTGTGTGGGGACA 58.795 50.000 0.00 0.00 38.70 4.02
2114 5677 1.045407 GTGTACTGTGTGGGGACAGA 58.955 55.000 7.65 0.00 45.39 3.41
2115 5678 1.623811 GTGTACTGTGTGGGGACAGAT 59.376 52.381 7.65 0.00 45.39 2.90
2116 5679 1.623311 TGTACTGTGTGGGGACAGATG 59.377 52.381 7.65 0.00 45.39 2.90
2117 5680 1.899814 GTACTGTGTGGGGACAGATGA 59.100 52.381 7.65 0.00 45.39 2.92
2118 5681 1.434188 ACTGTGTGGGGACAGATGAA 58.566 50.000 7.65 0.00 45.39 2.57
2119 5682 1.774254 ACTGTGTGGGGACAGATGAAA 59.226 47.619 7.65 0.00 45.39 2.69
2120 5683 2.154462 CTGTGTGGGGACAGATGAAAC 58.846 52.381 0.00 0.00 45.39 2.78
2121 5684 1.492599 TGTGTGGGGACAGATGAAACA 59.507 47.619 0.00 0.00 44.46 2.83
2122 5685 2.154462 GTGTGGGGACAGATGAAACAG 58.846 52.381 0.00 0.00 44.46 3.16
2123 5686 1.168714 GTGGGGACAGATGAAACAGC 58.831 55.000 0.00 0.00 44.46 4.40
2124 5687 1.067295 TGGGGACAGATGAAACAGCT 58.933 50.000 0.00 0.00 35.01 4.24
2125 5688 1.425066 TGGGGACAGATGAAACAGCTT 59.575 47.619 0.00 0.00 35.01 3.74
2126 5689 2.642311 TGGGGACAGATGAAACAGCTTA 59.358 45.455 0.00 0.00 35.01 3.09
2127 5690 3.073798 TGGGGACAGATGAAACAGCTTAA 59.926 43.478 0.00 0.00 35.01 1.85
2128 5691 3.691609 GGGGACAGATGAAACAGCTTAAG 59.308 47.826 0.00 0.00 0.00 1.85
2129 5692 4.327680 GGGACAGATGAAACAGCTTAAGT 58.672 43.478 4.02 0.00 0.00 2.24
2130 5693 4.154918 GGGACAGATGAAACAGCTTAAGTG 59.845 45.833 4.02 4.14 0.00 3.16
2131 5694 4.154918 GGACAGATGAAACAGCTTAAGTGG 59.845 45.833 4.02 0.00 0.00 4.00
2132 5695 4.074970 ACAGATGAAACAGCTTAAGTGGG 58.925 43.478 4.02 0.00 0.00 4.61
2133 5696 4.074970 CAGATGAAACAGCTTAAGTGGGT 58.925 43.478 4.02 0.00 0.00 4.51
2134 5697 4.074970 AGATGAAACAGCTTAAGTGGGTG 58.925 43.478 4.02 0.00 38.06 4.61
2135 5698 3.290948 TGAAACAGCTTAAGTGGGTGT 57.709 42.857 4.02 0.00 45.51 4.16
2139 5702 2.306847 ACAGCTTAAGTGGGTGTTTGG 58.693 47.619 4.02 0.00 41.72 3.28
2140 5703 2.306847 CAGCTTAAGTGGGTGTTTGGT 58.693 47.619 4.02 0.00 0.00 3.67
2141 5704 2.693074 CAGCTTAAGTGGGTGTTTGGTT 59.307 45.455 4.02 0.00 0.00 3.67
2142 5705 3.132111 CAGCTTAAGTGGGTGTTTGGTTT 59.868 43.478 4.02 0.00 0.00 3.27
2143 5706 3.383505 AGCTTAAGTGGGTGTTTGGTTTC 59.616 43.478 4.02 0.00 0.00 2.78
2144 5707 3.131400 GCTTAAGTGGGTGTTTGGTTTCA 59.869 43.478 4.02 0.00 0.00 2.69
2145 5708 4.736464 GCTTAAGTGGGTGTTTGGTTTCAG 60.736 45.833 4.02 0.00 0.00 3.02
2146 5709 1.775385 AGTGGGTGTTTGGTTTCAGG 58.225 50.000 0.00 0.00 0.00 3.86
2147 5710 0.750249 GTGGGTGTTTGGTTTCAGGG 59.250 55.000 0.00 0.00 0.00 4.45
2148 5711 0.631753 TGGGTGTTTGGTTTCAGGGA 59.368 50.000 0.00 0.00 0.00 4.20
2149 5712 1.219213 TGGGTGTTTGGTTTCAGGGAT 59.781 47.619 0.00 0.00 0.00 3.85
2150 5713 2.325484 GGGTGTTTGGTTTCAGGGATT 58.675 47.619 0.00 0.00 0.00 3.01
2151 5714 2.703536 GGGTGTTTGGTTTCAGGGATTT 59.296 45.455 0.00 0.00 0.00 2.17
2152 5715 3.135712 GGGTGTTTGGTTTCAGGGATTTT 59.864 43.478 0.00 0.00 0.00 1.82
2153 5716 4.384757 GGGTGTTTGGTTTCAGGGATTTTT 60.385 41.667 0.00 0.00 0.00 1.94
2192 5755 6.361768 AAAAAGTCCCTAACAAACCAAACA 57.638 33.333 0.00 0.00 0.00 2.83
2193 5756 5.592104 AAAGTCCCTAACAAACCAAACAG 57.408 39.130 0.00 0.00 0.00 3.16
2194 5757 3.562182 AGTCCCTAACAAACCAAACAGG 58.438 45.455 0.00 0.00 45.67 4.00
2195 5758 2.626266 GTCCCTAACAAACCAAACAGGG 59.374 50.000 0.00 0.00 43.52 4.45
2196 5759 1.967779 CCCTAACAAACCAAACAGGGG 59.032 52.381 0.00 0.00 43.89 4.79
2197 5760 1.967779 CCTAACAAACCAAACAGGGGG 59.032 52.381 0.00 0.00 43.89 5.40
2198 5761 2.425102 CCTAACAAACCAAACAGGGGGA 60.425 50.000 0.00 0.00 43.89 4.81
2199 5762 1.491668 AACAAACCAAACAGGGGGAC 58.508 50.000 0.00 0.00 43.89 4.46
2200 5763 0.634465 ACAAACCAAACAGGGGGACT 59.366 50.000 0.00 0.00 43.89 3.85
2201 5764 1.007842 ACAAACCAAACAGGGGGACTT 59.992 47.619 0.00 0.00 43.89 3.01
2202 5765 2.115427 CAAACCAAACAGGGGGACTTT 58.885 47.619 0.00 0.00 43.89 2.66
2203 5766 2.503765 CAAACCAAACAGGGGGACTTTT 59.496 45.455 0.00 0.00 43.89 2.27
2204 5767 2.561209 ACCAAACAGGGGGACTTTTT 57.439 45.000 0.00 0.00 43.89 1.94
2234 5797 7.859613 CTTTTTGCTAAAAGTCCTTAGAAGC 57.140 36.000 20.79 0.00 43.34 3.86
2235 5798 6.952773 TTTTGCTAAAAGTCCTTAGAAGCA 57.047 33.333 6.73 6.73 31.59 3.91
2236 5799 7.524717 TTTTGCTAAAAGTCCTTAGAAGCAT 57.475 32.000 10.03 0.00 31.59 3.79
2237 5800 6.743575 TTGCTAAAAGTCCTTAGAAGCATC 57.256 37.500 10.03 0.00 31.59 3.91
2238 5801 5.804639 TGCTAAAAGTCCTTAGAAGCATCA 58.195 37.500 6.73 0.00 31.59 3.07
2239 5802 5.643777 TGCTAAAAGTCCTTAGAAGCATCAC 59.356 40.000 6.73 0.00 31.59 3.06
2240 5803 5.065346 GCTAAAAGTCCTTAGAAGCATCACC 59.935 44.000 0.00 0.00 31.59 4.02
2241 5804 4.917906 AAAGTCCTTAGAAGCATCACCT 57.082 40.909 0.00 0.00 0.00 4.00
2242 5805 4.917906 AAGTCCTTAGAAGCATCACCTT 57.082 40.909 0.00 0.00 0.00 3.50
2243 5806 6.374417 AAAGTCCTTAGAAGCATCACCTTA 57.626 37.500 0.00 0.00 0.00 2.69
2244 5807 6.374417 AAGTCCTTAGAAGCATCACCTTAA 57.626 37.500 0.00 0.00 0.00 1.85
2245 5808 5.983540 AGTCCTTAGAAGCATCACCTTAAG 58.016 41.667 0.00 0.00 0.00 1.85
2246 5809 5.721960 AGTCCTTAGAAGCATCACCTTAAGA 59.278 40.000 3.36 0.00 0.00 2.10
2247 5810 6.045955 GTCCTTAGAAGCATCACCTTAAGAG 58.954 44.000 3.36 0.00 0.00 2.85
2248 5811 5.721960 TCCTTAGAAGCATCACCTTAAGAGT 59.278 40.000 3.36 0.00 0.00 3.24
2249 5812 6.045955 CCTTAGAAGCATCACCTTAAGAGTC 58.954 44.000 3.36 0.00 0.00 3.36
2250 5813 6.127196 CCTTAGAAGCATCACCTTAAGAGTCT 60.127 42.308 3.36 0.00 0.00 3.24
2251 5814 5.753721 AGAAGCATCACCTTAAGAGTCTT 57.246 39.130 10.87 10.87 0.00 3.01
2252 5815 6.120507 AGAAGCATCACCTTAAGAGTCTTT 57.879 37.500 11.40 0.00 0.00 2.52
2253 5816 6.538263 AGAAGCATCACCTTAAGAGTCTTTT 58.462 36.000 11.40 0.00 0.00 2.27
2254 5817 7.001073 AGAAGCATCACCTTAAGAGTCTTTTT 58.999 34.615 11.40 0.00 0.00 1.94
2286 5849 8.217131 GTCCTAGAGACTAGAAAAAGTCCTAG 57.783 42.308 15.36 15.36 45.86 3.02
2287 5850 7.576861 CCTAGAGACTAGAAAAAGTCCTAGG 57.423 44.000 21.21 21.21 46.65 3.02
2289 5852 8.217131 CTAGAGACTAGAAAAAGTCCTAGGAC 57.783 42.308 31.29 31.29 45.86 3.85
2303 5866 5.861727 GTCCTAGGACTAGAAAACCAAACA 58.138 41.667 31.12 0.00 41.57 2.83
2304 5867 5.699915 GTCCTAGGACTAGAAAACCAAACAC 59.300 44.000 31.12 2.21 41.57 3.32
2305 5868 5.001874 CCTAGGACTAGAAAACCAAACACC 58.998 45.833 1.05 0.00 35.21 4.16
2306 5869 4.513406 AGGACTAGAAAACCAAACACCA 57.487 40.909 0.00 0.00 0.00 4.17
2307 5870 4.204799 AGGACTAGAAAACCAAACACCAC 58.795 43.478 0.00 0.00 0.00 4.16
2308 5871 3.317149 GGACTAGAAAACCAAACACCACC 59.683 47.826 0.00 0.00 0.00 4.61
2309 5872 4.204799 GACTAGAAAACCAAACACCACCT 58.795 43.478 0.00 0.00 0.00 4.00
2310 5873 5.370679 GACTAGAAAACCAAACACCACCTA 58.629 41.667 0.00 0.00 0.00 3.08
2311 5874 5.757988 ACTAGAAAACCAAACACCACCTAA 58.242 37.500 0.00 0.00 0.00 2.69
2312 5875 5.826208 ACTAGAAAACCAAACACCACCTAAG 59.174 40.000 0.00 0.00 0.00 2.18
2313 5876 4.862371 AGAAAACCAAACACCACCTAAGA 58.138 39.130 0.00 0.00 0.00 2.10
2314 5877 5.454966 AGAAAACCAAACACCACCTAAGAT 58.545 37.500 0.00 0.00 0.00 2.40
2315 5878 5.535030 AGAAAACCAAACACCACCTAAGATC 59.465 40.000 0.00 0.00 0.00 2.75
2316 5879 3.053831 ACCAAACACCACCTAAGATCG 57.946 47.619 0.00 0.00 0.00 3.69
2317 5880 1.737793 CCAAACACCACCTAAGATCGC 59.262 52.381 0.00 0.00 0.00 4.58
2318 5881 2.422597 CAAACACCACCTAAGATCGCA 58.577 47.619 0.00 0.00 0.00 5.10
2319 5882 2.386661 AACACCACCTAAGATCGCAG 57.613 50.000 0.00 0.00 0.00 5.18
2320 5883 0.537188 ACACCACCTAAGATCGCAGG 59.463 55.000 12.61 12.61 37.97 4.85
2321 5884 0.824109 CACCACCTAAGATCGCAGGA 59.176 55.000 19.13 0.00 35.76 3.86
2322 5885 1.115467 ACCACCTAAGATCGCAGGAG 58.885 55.000 19.13 12.55 35.76 3.69
2323 5886 1.115467 CCACCTAAGATCGCAGGAGT 58.885 55.000 19.13 0.00 35.76 3.85
2324 5887 1.202463 CCACCTAAGATCGCAGGAGTG 60.202 57.143 19.13 9.81 35.76 3.51
2325 5888 1.115467 ACCTAAGATCGCAGGAGTGG 58.885 55.000 19.13 3.60 35.76 4.00
2326 5889 1.115467 CCTAAGATCGCAGGAGTGGT 58.885 55.000 9.42 0.00 33.42 4.16
2327 5890 1.067821 CCTAAGATCGCAGGAGTGGTC 59.932 57.143 9.42 0.00 35.59 4.02
2328 5891 1.751351 CTAAGATCGCAGGAGTGGTCA 59.249 52.381 0.00 0.00 37.85 4.02
2329 5892 1.198713 AAGATCGCAGGAGTGGTCAT 58.801 50.000 0.00 0.00 37.85 3.06
2330 5893 0.749649 AGATCGCAGGAGTGGTCATC 59.250 55.000 0.00 0.00 37.85 2.92
2331 5894 0.596083 GATCGCAGGAGTGGTCATCG 60.596 60.000 0.00 0.00 35.44 3.84
2332 5895 1.323271 ATCGCAGGAGTGGTCATCGT 61.323 55.000 0.00 0.00 0.00 3.73
2333 5896 1.517257 CGCAGGAGTGGTCATCGTC 60.517 63.158 0.00 0.00 0.00 4.20
2334 5897 1.591703 GCAGGAGTGGTCATCGTCA 59.408 57.895 0.00 0.00 0.00 4.35
2335 5898 0.737715 GCAGGAGTGGTCATCGTCAC 60.738 60.000 0.00 0.00 0.00 3.67
2336 5899 0.603065 CAGGAGTGGTCATCGTCACA 59.397 55.000 0.00 0.00 36.43 3.58
2337 5900 1.205655 CAGGAGTGGTCATCGTCACAT 59.794 52.381 0.00 0.00 36.43 3.21
2338 5901 1.902508 AGGAGTGGTCATCGTCACATT 59.097 47.619 0.00 0.00 36.43 2.71
2339 5902 2.002586 GGAGTGGTCATCGTCACATTG 58.997 52.381 0.00 0.00 36.43 2.82
2340 5903 2.612972 GGAGTGGTCATCGTCACATTGT 60.613 50.000 0.00 0.00 36.43 2.71
2341 5904 3.067106 GAGTGGTCATCGTCACATTGTT 58.933 45.455 0.00 0.00 36.43 2.83
2342 5905 3.476552 AGTGGTCATCGTCACATTGTTT 58.523 40.909 0.00 0.00 36.43 2.83
2343 5906 3.882888 AGTGGTCATCGTCACATTGTTTT 59.117 39.130 0.00 0.00 36.43 2.43
2344 5907 4.338118 AGTGGTCATCGTCACATTGTTTTT 59.662 37.500 0.00 0.00 36.43 1.94
2362 5925 3.505464 TTTTGCCGGAAAAACTTTCGA 57.495 38.095 16.82 0.00 30.25 3.71
2363 5926 3.719173 TTTGCCGGAAAAACTTTCGAT 57.281 38.095 4.67 0.00 0.00 3.59
2364 5927 2.981400 TGCCGGAAAAACTTTCGATC 57.019 45.000 5.05 0.00 0.00 3.69
2365 5928 2.500229 TGCCGGAAAAACTTTCGATCT 58.500 42.857 5.05 0.00 0.00 2.75
2366 5929 3.666274 TGCCGGAAAAACTTTCGATCTA 58.334 40.909 5.05 0.00 0.00 1.98
2367 5930 4.258543 TGCCGGAAAAACTTTCGATCTAT 58.741 39.130 5.05 0.00 0.00 1.98
2368 5931 4.698304 TGCCGGAAAAACTTTCGATCTATT 59.302 37.500 5.05 0.00 0.00 1.73
2369 5932 5.163794 TGCCGGAAAAACTTTCGATCTATTC 60.164 40.000 5.05 0.00 0.00 1.75
2370 5933 5.163794 GCCGGAAAAACTTTCGATCTATTCA 60.164 40.000 5.05 0.00 0.00 2.57
2371 5934 6.458342 GCCGGAAAAACTTTCGATCTATTCAT 60.458 38.462 5.05 0.00 0.00 2.57
2372 5935 7.472543 CCGGAAAAACTTTCGATCTATTCATT 58.527 34.615 0.00 0.00 0.00 2.57
2373 5936 8.609176 CCGGAAAAACTTTCGATCTATTCATTA 58.391 33.333 0.00 0.00 0.00 1.90
2374 5937 9.982291 CGGAAAAACTTTCGATCTATTCATTAA 57.018 29.630 0.00 0.00 0.00 1.40
2399 5962 9.561069 AATTGTCAAGTTAGTACAACAGATTCT 57.439 29.630 0.00 0.00 36.06 2.40
2402 5965 9.639601 TGTCAAGTTAGTACAACAGATTCTATG 57.360 33.333 0.00 0.00 0.00 2.23
2403 5966 9.640963 GTCAAGTTAGTACAACAGATTCTATGT 57.359 33.333 8.73 8.73 0.00 2.29
2431 5994 9.201989 TGAATTATACCATGTAGTCTTCTGAGT 57.798 33.333 0.00 0.00 0.00 3.41
2435 5998 7.956328 ATACCATGTAGTCTTCTGAGTTACA 57.044 36.000 0.00 0.00 32.69 2.41
2436 5999 6.665992 ACCATGTAGTCTTCTGAGTTACAA 57.334 37.500 0.00 0.00 32.27 2.41
2437 6000 6.692486 ACCATGTAGTCTTCTGAGTTACAAG 58.308 40.000 0.00 0.00 32.27 3.16
2438 6001 5.578727 CCATGTAGTCTTCTGAGTTACAAGC 59.421 44.000 0.00 0.00 32.27 4.01
2439 6002 6.393990 CATGTAGTCTTCTGAGTTACAAGCT 58.606 40.000 0.00 0.00 32.27 3.74
2440 6003 5.773575 TGTAGTCTTCTGAGTTACAAGCTG 58.226 41.667 0.00 0.00 0.00 4.24
2441 6004 5.535030 TGTAGTCTTCTGAGTTACAAGCTGA 59.465 40.000 0.00 0.00 0.00 4.26
2442 6005 4.877282 AGTCTTCTGAGTTACAAGCTGAC 58.123 43.478 0.00 0.00 0.00 3.51
2443 6006 4.342378 AGTCTTCTGAGTTACAAGCTGACA 59.658 41.667 0.00 0.00 0.00 3.58
2444 6007 4.683781 GTCTTCTGAGTTACAAGCTGACAG 59.316 45.833 0.00 0.00 0.00 3.51
2445 6008 3.032017 TCTGAGTTACAAGCTGACAGC 57.968 47.619 20.12 20.12 42.84 4.40
2459 6022 5.924475 GCTGACAGCTTGTAGTCTTTTAA 57.076 39.130 20.41 0.00 38.45 1.52
2460 6023 5.921429 GCTGACAGCTTGTAGTCTTTTAAG 58.079 41.667 20.41 0.00 38.45 1.85
2461 6024 5.467063 GCTGACAGCTTGTAGTCTTTTAAGT 59.533 40.000 20.41 0.00 38.45 2.24
2462 6025 6.645415 GCTGACAGCTTGTAGTCTTTTAAGTA 59.355 38.462 20.41 0.00 38.45 2.24
2463 6026 7.170998 GCTGACAGCTTGTAGTCTTTTAAGTAA 59.829 37.037 20.41 0.00 38.45 2.24
2464 6027 9.209175 CTGACAGCTTGTAGTCTTTTAAGTAAT 57.791 33.333 3.85 0.00 35.81 1.89
2465 6028 9.555727 TGACAGCTTGTAGTCTTTTAAGTAATT 57.444 29.630 3.85 0.00 35.81 1.40
2467 6030 8.709646 ACAGCTTGTAGTCTTTTAAGTAATTCG 58.290 33.333 0.00 0.00 0.00 3.34
2468 6031 8.709646 CAGCTTGTAGTCTTTTAAGTAATTCGT 58.290 33.333 0.00 0.00 0.00 3.85
2469 6032 8.709646 AGCTTGTAGTCTTTTAAGTAATTCGTG 58.290 33.333 0.00 0.00 0.00 4.35
2470 6033 8.706035 GCTTGTAGTCTTTTAAGTAATTCGTGA 58.294 33.333 0.00 0.00 0.00 4.35
2472 6035 9.970395 TTGTAGTCTTTTAAGTAATTCGTGAGA 57.030 29.630 0.00 0.00 39.20 3.27
2481 6044 3.450507 TTCGTGAGAACGCCCTCA 58.549 55.556 3.54 3.54 46.92 3.86
2482 6045 1.972198 TTCGTGAGAACGCCCTCAT 59.028 52.632 10.03 0.00 46.92 2.90
2483 6046 0.389817 TTCGTGAGAACGCCCTCATG 60.390 55.000 16.42 16.42 46.92 3.07
2484 6047 2.456119 CGTGAGAACGCCCTCATGC 61.456 63.158 12.12 1.20 44.09 4.06
2485 6048 1.375908 GTGAGAACGCCCTCATGCA 60.376 57.895 10.03 0.00 44.09 3.96
2486 6049 1.375908 TGAGAACGCCCTCATGCAC 60.376 57.895 3.54 0.00 38.18 4.57
2487 6050 1.078848 GAGAACGCCCTCATGCACT 60.079 57.895 0.00 0.00 33.50 4.40
2488 6051 0.674895 GAGAACGCCCTCATGCACTT 60.675 55.000 0.00 0.00 33.50 3.16
2489 6052 0.250901 AGAACGCCCTCATGCACTTT 60.251 50.000 0.00 0.00 0.00 2.66
2490 6053 0.109597 GAACGCCCTCATGCACTTTG 60.110 55.000 0.00 0.00 0.00 2.77
2491 6054 1.526575 AACGCCCTCATGCACTTTGG 61.527 55.000 0.00 0.00 0.00 3.28
2492 6055 1.675310 CGCCCTCATGCACTTTGGA 60.675 57.895 0.00 0.00 0.00 3.53
2493 6056 1.033746 CGCCCTCATGCACTTTGGAT 61.034 55.000 0.00 0.00 0.00 3.41
2494 6057 0.743097 GCCCTCATGCACTTTGGATC 59.257 55.000 0.00 0.00 0.00 3.36
2495 6058 1.684248 GCCCTCATGCACTTTGGATCT 60.684 52.381 0.00 0.00 0.00 2.75
2496 6059 2.731572 CCCTCATGCACTTTGGATCTT 58.268 47.619 0.00 0.00 0.00 2.40
2497 6060 2.426024 CCCTCATGCACTTTGGATCTTG 59.574 50.000 0.00 0.00 0.00 3.02
2498 6061 3.349927 CCTCATGCACTTTGGATCTTGA 58.650 45.455 0.00 0.00 0.00 3.02
2499 6062 3.760151 CCTCATGCACTTTGGATCTTGAA 59.240 43.478 0.00 0.00 0.00 2.69
2500 6063 4.401519 CCTCATGCACTTTGGATCTTGAAT 59.598 41.667 0.00 0.00 0.00 2.57
2501 6064 5.450137 CCTCATGCACTTTGGATCTTGAATC 60.450 44.000 0.00 0.00 0.00 2.52
2502 6065 4.400251 TCATGCACTTTGGATCTTGAATCC 59.600 41.667 0.00 0.00 38.66 3.01
2503 6066 4.038271 TGCACTTTGGATCTTGAATCCT 57.962 40.909 5.71 0.00 38.95 3.24
2504 6067 5.178096 TGCACTTTGGATCTTGAATCCTA 57.822 39.130 5.71 0.00 38.95 2.94
2505 6068 5.569355 TGCACTTTGGATCTTGAATCCTAA 58.431 37.500 5.71 3.70 38.95 2.69
2506 6069 6.009589 TGCACTTTGGATCTTGAATCCTAAA 58.990 36.000 5.71 4.35 38.95 1.85
2507 6070 6.151648 TGCACTTTGGATCTTGAATCCTAAAG 59.848 38.462 17.72 17.72 39.45 1.85
2508 6071 6.151817 GCACTTTGGATCTTGAATCCTAAAGT 59.848 38.462 18.49 18.49 42.80 2.66
2509 6072 7.533426 CACTTTGGATCTTGAATCCTAAAGTG 58.467 38.462 25.96 25.96 45.96 3.16
2510 6073 7.175641 CACTTTGGATCTTGAATCCTAAAGTGT 59.824 37.037 27.79 13.98 45.99 3.55
2511 6074 7.725844 ACTTTGGATCTTGAATCCTAAAGTGTT 59.274 33.333 20.95 8.10 41.82 3.32
2512 6075 8.477419 TTTGGATCTTGAATCCTAAAGTGTTT 57.523 30.769 5.71 0.00 38.95 2.83
2513 6076 7.452880 TGGATCTTGAATCCTAAAGTGTTTG 57.547 36.000 5.71 0.00 38.95 2.93
2514 6077 6.071952 TGGATCTTGAATCCTAAAGTGTTTGC 60.072 38.462 5.71 0.00 38.95 3.68
2515 6078 6.151817 GGATCTTGAATCCTAAAGTGTTTGCT 59.848 38.462 0.00 0.00 35.36 3.91
2516 6079 6.560253 TCTTGAATCCTAAAGTGTTTGCTC 57.440 37.500 0.00 0.00 0.00 4.26
2517 6080 6.299141 TCTTGAATCCTAAAGTGTTTGCTCT 58.701 36.000 0.00 0.00 0.00 4.09
2518 6081 6.428159 TCTTGAATCCTAAAGTGTTTGCTCTC 59.572 38.462 0.00 0.00 0.00 3.20
2519 6082 5.620206 TGAATCCTAAAGTGTTTGCTCTCA 58.380 37.500 0.00 0.00 0.00 3.27
2520 6083 5.470098 TGAATCCTAAAGTGTTTGCTCTCAC 59.530 40.000 0.00 0.00 35.13 3.51
2521 6084 3.390135 TCCTAAAGTGTTTGCTCTCACG 58.610 45.455 0.00 0.00 39.25 4.35
2522 6085 3.131396 CCTAAAGTGTTTGCTCTCACGT 58.869 45.455 0.00 0.00 39.25 4.49
2523 6086 4.038282 TCCTAAAGTGTTTGCTCTCACGTA 59.962 41.667 0.00 0.00 39.25 3.57
2524 6087 4.929808 CCTAAAGTGTTTGCTCTCACGTAT 59.070 41.667 0.00 0.00 39.25 3.06
2525 6088 4.992381 AAAGTGTTTGCTCTCACGTATC 57.008 40.909 0.00 0.00 39.25 2.24
2526 6089 2.960819 AGTGTTTGCTCTCACGTATCC 58.039 47.619 0.00 0.00 39.25 2.59
2527 6090 2.000447 GTGTTTGCTCTCACGTATCCC 59.000 52.381 0.00 0.00 0.00 3.85
2528 6091 1.899814 TGTTTGCTCTCACGTATCCCT 59.100 47.619 0.00 0.00 0.00 4.20
2529 6092 2.094182 TGTTTGCTCTCACGTATCCCTC 60.094 50.000 0.00 0.00 0.00 4.30
2530 6093 2.145397 TTGCTCTCACGTATCCCTCT 57.855 50.000 0.00 0.00 0.00 3.69
2531 6094 1.393603 TGCTCTCACGTATCCCTCTG 58.606 55.000 0.00 0.00 0.00 3.35
2532 6095 1.064685 TGCTCTCACGTATCCCTCTGA 60.065 52.381 0.00 0.00 0.00 3.27
2533 6096 1.606668 GCTCTCACGTATCCCTCTGAG 59.393 57.143 0.00 0.00 32.86 3.35
2534 6097 1.606668 CTCTCACGTATCCCTCTGAGC 59.393 57.143 0.00 0.00 31.83 4.26
2535 6098 0.671251 CTCACGTATCCCTCTGAGCC 59.329 60.000 0.00 0.00 0.00 4.70
2536 6099 0.033503 TCACGTATCCCTCTGAGCCA 60.034 55.000 0.00 0.00 0.00 4.75
2537 6100 0.824109 CACGTATCCCTCTGAGCCAA 59.176 55.000 0.00 0.00 0.00 4.52
2538 6101 1.207089 CACGTATCCCTCTGAGCCAAA 59.793 52.381 0.00 0.00 0.00 3.28
2539 6102 2.119495 ACGTATCCCTCTGAGCCAAAT 58.881 47.619 0.00 0.00 0.00 2.32
2540 6103 3.069586 CACGTATCCCTCTGAGCCAAATA 59.930 47.826 0.00 0.00 0.00 1.40
2541 6104 3.069729 ACGTATCCCTCTGAGCCAAATAC 59.930 47.826 0.00 3.68 0.00 1.89
2542 6105 3.069586 CGTATCCCTCTGAGCCAAATACA 59.930 47.826 0.00 0.00 0.00 2.29
2543 6106 4.442893 CGTATCCCTCTGAGCCAAATACAA 60.443 45.833 0.00 0.00 0.00 2.41
2544 6107 3.634397 TCCCTCTGAGCCAAATACAAG 57.366 47.619 0.00 0.00 0.00 3.16
2545 6108 2.019984 CCCTCTGAGCCAAATACAAGC 58.980 52.381 0.00 0.00 0.00 4.01
2546 6109 2.356535 CCCTCTGAGCCAAATACAAGCT 60.357 50.000 0.00 0.00 40.24 3.74
2547 6110 2.681848 CCTCTGAGCCAAATACAAGCTG 59.318 50.000 0.00 0.00 36.87 4.24
2548 6111 2.681848 CTCTGAGCCAAATACAAGCTGG 59.318 50.000 0.00 0.00 36.87 4.85
2550 6113 4.792106 GCCAAATACAAGCTGGCG 57.208 55.556 0.00 0.00 45.72 5.69
2551 6114 1.883021 GCCAAATACAAGCTGGCGT 59.117 52.632 0.00 0.00 45.72 5.68
2552 6115 1.091537 GCCAAATACAAGCTGGCGTA 58.908 50.000 0.00 0.00 45.72 4.42
2553 6116 1.470890 GCCAAATACAAGCTGGCGTAA 59.529 47.619 0.00 0.00 45.72 3.18
2554 6117 2.477863 GCCAAATACAAGCTGGCGTAAG 60.478 50.000 0.00 0.00 45.72 2.34
2555 6118 3.006940 CCAAATACAAGCTGGCGTAAGA 58.993 45.455 0.00 0.00 43.02 2.10
2556 6119 3.438781 CCAAATACAAGCTGGCGTAAGAA 59.561 43.478 0.00 0.00 43.02 2.52
2557 6120 4.083003 CCAAATACAAGCTGGCGTAAGAAA 60.083 41.667 0.00 0.00 43.02 2.52
2558 6121 4.946784 AATACAAGCTGGCGTAAGAAAG 57.053 40.909 0.00 0.00 43.02 2.62
2559 6122 1.523758 ACAAGCTGGCGTAAGAAAGG 58.476 50.000 0.00 0.00 43.02 3.11
2560 6123 1.202770 ACAAGCTGGCGTAAGAAAGGT 60.203 47.619 0.00 0.00 43.02 3.50
2561 6124 1.880027 CAAGCTGGCGTAAGAAAGGTT 59.120 47.619 0.00 0.00 40.93 3.50
2562 6125 2.271944 AGCTGGCGTAAGAAAGGTTT 57.728 45.000 0.00 0.00 43.02 3.27
2563 6126 1.880027 AGCTGGCGTAAGAAAGGTTTG 59.120 47.619 0.00 0.00 43.02 2.93
2564 6127 1.666023 GCTGGCGTAAGAAAGGTTTGC 60.666 52.381 0.00 0.00 43.02 3.68
2565 6128 1.880027 CTGGCGTAAGAAAGGTTTGCT 59.120 47.619 0.00 0.00 43.02 3.91
2566 6129 1.877443 TGGCGTAAGAAAGGTTTGCTC 59.123 47.619 0.00 0.00 43.02 4.26
2567 6130 1.136057 GGCGTAAGAAAGGTTTGCTCG 60.136 52.381 0.00 0.00 43.02 5.03
2568 6131 1.136057 GCGTAAGAAAGGTTTGCTCGG 60.136 52.381 0.00 0.00 43.02 4.63
2569 6132 1.463444 CGTAAGAAAGGTTTGCTCGGG 59.537 52.381 0.00 0.00 43.02 5.14
2570 6133 2.774687 GTAAGAAAGGTTTGCTCGGGA 58.225 47.619 0.00 0.00 0.00 5.14
2571 6134 1.605753 AAGAAAGGTTTGCTCGGGAC 58.394 50.000 0.00 0.00 0.00 4.46
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
112 113 8.839947 TGATTTAATTGAGTTAATGCATCACG 57.160 30.769 0.00 0.00 32.56 4.35
123 124 9.985730 TCAGCTTTGATTTGATTTAATTGAGTT 57.014 25.926 0.00 0.00 0.00 3.01
145 146 6.913170 TGATTTAGTTGAGATTTTGGTCAGC 58.087 36.000 0.00 0.00 0.00 4.26
148 149 9.750125 AGTTTTGATTTAGTTGAGATTTTGGTC 57.250 29.630 0.00 0.00 0.00 4.02
196 197 9.265862 AGGTTTTGATATGATTTGATTTGGGTA 57.734 29.630 0.00 0.00 0.00 3.69
201 202 9.657419 GGTTGAGGTTTTGATATGATTTGATTT 57.343 29.630 0.00 0.00 0.00 2.17
221 222 8.702163 ACAAGTAAAGTTTTGATTTGGTTGAG 57.298 30.769 0.00 0.00 0.00 3.02
328 3782 1.816259 GGTATTTGCCCGTGCGCTA 60.816 57.895 9.73 0.00 41.78 4.26
345 3799 7.431249 TCGGTAAGCACATTTTCTATACTAGG 58.569 38.462 0.00 0.00 0.00 3.02
359 3813 1.535028 CACAGCATTTCGGTAAGCACA 59.465 47.619 0.00 0.00 0.00 4.57
457 3912 5.868801 CCAAGTGCTCTTTGTTTCTGAAAAA 59.131 36.000 4.09 0.00 0.00 1.94
458 3913 5.047377 ACCAAGTGCTCTTTGTTTCTGAAAA 60.047 36.000 4.09 0.00 0.00 2.29
459 3914 4.462483 ACCAAGTGCTCTTTGTTTCTGAAA 59.538 37.500 0.00 0.00 0.00 2.69
460 3915 4.016444 ACCAAGTGCTCTTTGTTTCTGAA 58.984 39.130 0.00 0.00 0.00 3.02
461 3916 3.620488 ACCAAGTGCTCTTTGTTTCTGA 58.380 40.909 0.00 0.00 0.00 3.27
462 3917 3.243201 GGACCAAGTGCTCTTTGTTTCTG 60.243 47.826 6.69 0.00 31.15 3.02
463 3918 2.952310 GGACCAAGTGCTCTTTGTTTCT 59.048 45.455 6.69 0.00 31.15 2.52
464 3919 2.034685 GGGACCAAGTGCTCTTTGTTTC 59.965 50.000 6.69 3.57 31.15 2.78
510 3967 3.467119 CCGACGAACCGACGCAAG 61.467 66.667 0.00 0.00 42.55 4.01
551 4008 2.288886 CCTTTCGTCCTTTTCTCTCGGT 60.289 50.000 0.00 0.00 0.00 4.69
555 4012 4.826556 CATCTCCTTTCGTCCTTTTCTCT 58.173 43.478 0.00 0.00 0.00 3.10
645 4102 1.977009 CGGGAAAGGGAAAGGCACC 60.977 63.158 0.00 0.00 0.00 5.01
678 4139 4.121669 GAGTCTGAGCTGCGGCGA 62.122 66.667 12.98 0.00 44.37 5.54
688 4149 1.112916 TCTGGGTTGCGTGAGTCTGA 61.113 55.000 0.00 0.00 0.00 3.27
690 4151 0.468226 TTTCTGGGTTGCGTGAGTCT 59.532 50.000 0.00 0.00 0.00 3.24
691 4152 0.586802 GTTTCTGGGTTGCGTGAGTC 59.413 55.000 0.00 0.00 0.00 3.36
694 4155 1.305201 GAAGTTTCTGGGTTGCGTGA 58.695 50.000 0.00 0.00 0.00 4.35
698 4183 0.315251 GGCTGAAGTTTCTGGGTTGC 59.685 55.000 1.75 0.00 0.00 4.17
748 4233 0.963225 TCTTGCTGGTACTACGTGCA 59.037 50.000 0.00 0.00 0.00 4.57
760 4248 5.474876 AGTGGGATTTTTAAGAGTCTTGCTG 59.525 40.000 15.90 0.00 0.00 4.41
766 4254 4.828829 TCCGAGTGGGATTTTTAAGAGTC 58.171 43.478 0.00 0.00 40.94 3.36
780 4268 1.944676 GCGCGTAGAATCCGAGTGG 60.945 63.158 8.43 0.00 0.00 4.00
852 4340 3.827898 GTGGACGGAGGAGGAGCG 61.828 72.222 0.00 0.00 0.00 5.03
862 4350 1.805120 CGCCTGTTTATAGGTGGACGG 60.805 57.143 0.00 0.00 43.15 4.79
865 4353 0.179094 CGCGCCTGTTTATAGGTGGA 60.179 55.000 0.00 0.00 46.16 4.02
884 4372 1.801512 GCAAAGGAAACATCGCGGC 60.802 57.895 6.13 0.00 0.00 6.53
900 4388 0.321475 TGTGATGGATGAAGCACGCA 60.321 50.000 0.00 0.00 34.12 5.24
919 4407 4.646945 TCTGCTTCTAGTTTCGATCTGGAT 59.353 41.667 5.38 0.00 0.00 3.41
920 4408 4.017126 TCTGCTTCTAGTTTCGATCTGGA 58.983 43.478 0.00 0.00 0.00 3.86
921 4409 4.142271 ACTCTGCTTCTAGTTTCGATCTGG 60.142 45.833 0.00 0.00 0.00 3.86
923 4411 6.761099 TTACTCTGCTTCTAGTTTCGATCT 57.239 37.500 0.00 0.00 0.00 2.75
924 4412 6.358558 CGATTACTCTGCTTCTAGTTTCGATC 59.641 42.308 0.00 0.00 34.61 3.69
925 4413 6.038382 TCGATTACTCTGCTTCTAGTTTCGAT 59.962 38.462 0.00 0.00 35.79 3.59
926 4414 5.353400 TCGATTACTCTGCTTCTAGTTTCGA 59.647 40.000 0.00 0.00 37.09 3.71
927 4415 5.570344 TCGATTACTCTGCTTCTAGTTTCG 58.430 41.667 0.00 0.00 34.29 3.46
928 4416 5.457473 GCTCGATTACTCTGCTTCTAGTTTC 59.543 44.000 0.00 0.00 0.00 2.78
929 4417 5.126384 AGCTCGATTACTCTGCTTCTAGTTT 59.874 40.000 0.00 0.00 0.00 2.66
930 4418 4.642885 AGCTCGATTACTCTGCTTCTAGTT 59.357 41.667 0.00 0.00 0.00 2.24
931 4419 4.204012 AGCTCGATTACTCTGCTTCTAGT 58.796 43.478 0.00 0.00 0.00 2.57
932 4420 4.829064 AGCTCGATTACTCTGCTTCTAG 57.171 45.455 0.00 0.00 0.00 2.43
933 4421 4.757657 CCTAGCTCGATTACTCTGCTTCTA 59.242 45.833 0.00 0.00 33.18 2.10
934 4422 3.568007 CCTAGCTCGATTACTCTGCTTCT 59.432 47.826 0.00 0.00 33.18 2.85
937 4425 3.216187 TCCTAGCTCGATTACTCTGCT 57.784 47.619 0.00 0.00 34.64 4.24
940 4428 5.594725 TGTTCAATCCTAGCTCGATTACTCT 59.405 40.000 8.27 0.00 0.00 3.24
944 4432 5.010112 CCTCTGTTCAATCCTAGCTCGATTA 59.990 44.000 8.27 0.00 0.00 1.75
945 4433 4.202202 CCTCTGTTCAATCCTAGCTCGATT 60.202 45.833 0.00 0.00 0.00 3.34
958 4446 0.491823 TCCTCCCCTCCTCTGTTCAA 59.508 55.000 0.00 0.00 0.00 2.69
959 4447 0.491823 TTCCTCCCCTCCTCTGTTCA 59.508 55.000 0.00 0.00 0.00 3.18
960 4448 1.199615 CTTCCTCCCCTCCTCTGTTC 58.800 60.000 0.00 0.00 0.00 3.18
962 4450 0.793617 TTCTTCCTCCCCTCCTCTGT 59.206 55.000 0.00 0.00 0.00 3.41
1222 4727 7.830697 TGCAAATTAATGAGAGGAAGAAGATCA 59.169 33.333 0.00 0.00 0.00 2.92
1223 4728 8.127954 GTGCAAATTAATGAGAGGAAGAAGATC 58.872 37.037 0.00 0.00 0.00 2.75
1224 4729 7.201679 CGTGCAAATTAATGAGAGGAAGAAGAT 60.202 37.037 0.00 0.00 0.00 2.40
1236 4741 8.837788 ATCTATCTCATCGTGCAAATTAATGA 57.162 30.769 0.00 0.00 0.00 2.57
1237 4742 8.173775 GGATCTATCTCATCGTGCAAATTAATG 58.826 37.037 0.00 0.00 0.00 1.90
1238 4743 7.879677 TGGATCTATCTCATCGTGCAAATTAAT 59.120 33.333 0.00 0.00 0.00 1.40
1240 4745 6.758254 TGGATCTATCTCATCGTGCAAATTA 58.242 36.000 0.00 0.00 0.00 1.40
1241 4746 5.614308 TGGATCTATCTCATCGTGCAAATT 58.386 37.500 0.00 0.00 0.00 1.82
1403 4928 1.767088 CTGCCCAGATCCTTCATGAGA 59.233 52.381 0.00 0.00 0.00 3.27
1415 4940 3.940480 TCCCAGTCCCTGCCCAGA 61.940 66.667 0.00 0.00 0.00 3.86
1445 4970 0.827925 TGGTGAGCTTGACGAGGAGT 60.828 55.000 0.00 0.00 0.00 3.85
1505 5030 4.612412 TTGAACTCGCCGGCGGTT 62.612 61.111 44.95 41.00 40.25 4.44
1554 5079 4.821589 CTCCTCGGTCTTGGCGGC 62.822 72.222 0.00 0.00 0.00 6.53
1640 5172 1.401552 TGCTCTCATTATTGCGGCAAC 59.598 47.619 18.94 2.35 0.00 4.17
1641 5173 1.748950 TGCTCTCATTATTGCGGCAA 58.251 45.000 18.85 18.85 0.00 4.52
1642 5174 1.748950 TTGCTCTCATTATTGCGGCA 58.251 45.000 0.00 0.00 0.00 5.69
1735 5281 2.427232 GCAACAAGCAGATCTTTGCA 57.573 45.000 19.48 0.00 46.47 4.08
1765 5311 4.006989 TGCGTTAATTTACTGCTGACCAT 58.993 39.130 0.00 0.00 0.00 3.55
1766 5312 3.403968 TGCGTTAATTTACTGCTGACCA 58.596 40.909 0.00 0.00 0.00 4.02
1768 5314 4.638963 GTCTGCGTTAATTTACTGCTGAC 58.361 43.478 21.86 21.86 43.67 3.51
1771 5317 3.933332 GGAGTCTGCGTTAATTTACTGCT 59.067 43.478 10.89 0.00 0.00 4.24
1799 5345 0.319555 TTTCGGGACTCGTTCTGCAG 60.320 55.000 7.63 7.63 40.32 4.41
1802 5348 4.683832 AGATATTTTCGGGACTCGTTCTG 58.316 43.478 0.00 0.00 40.32 3.02
1851 5399 4.210120 CGCCACTATAGATGCTCTGTTTTC 59.790 45.833 6.78 0.00 0.00 2.29
1889 5437 6.216569 AGTACATATACCGTTGAAGATGCTG 58.783 40.000 0.00 0.00 30.88 4.41
1948 5496 6.643770 ACTGTTTTGTCGTTCGTATCACTAAT 59.356 34.615 0.00 0.00 0.00 1.73
1949 5497 5.978919 ACTGTTTTGTCGTTCGTATCACTAA 59.021 36.000 0.00 0.00 0.00 2.24
1951 5499 4.365723 ACTGTTTTGTCGTTCGTATCACT 58.634 39.130 0.00 0.00 0.00 3.41
1952 5500 4.703899 ACTGTTTTGTCGTTCGTATCAC 57.296 40.909 0.00 0.00 0.00 3.06
1953 5501 4.919168 CCTACTGTTTTGTCGTTCGTATCA 59.081 41.667 0.00 0.00 0.00 2.15
1954 5502 4.325472 CCCTACTGTTTTGTCGTTCGTATC 59.675 45.833 0.00 0.00 0.00 2.24
1955 5503 4.022068 TCCCTACTGTTTTGTCGTTCGTAT 60.022 41.667 0.00 0.00 0.00 3.06
1956 5504 3.317711 TCCCTACTGTTTTGTCGTTCGTA 59.682 43.478 0.00 0.00 0.00 3.43
1957 5505 2.101249 TCCCTACTGTTTTGTCGTTCGT 59.899 45.455 0.00 0.00 0.00 3.85
1958 5506 2.729882 CTCCCTACTGTTTTGTCGTTCG 59.270 50.000 0.00 0.00 0.00 3.95
1959 5507 3.986277 TCTCCCTACTGTTTTGTCGTTC 58.014 45.455 0.00 0.00 0.00 3.95
1960 5508 4.377897 CTTCTCCCTACTGTTTTGTCGTT 58.622 43.478 0.00 0.00 0.00 3.85
1961 5509 3.802675 GCTTCTCCCTACTGTTTTGTCGT 60.803 47.826 0.00 0.00 0.00 4.34
1962 5510 2.737252 GCTTCTCCCTACTGTTTTGTCG 59.263 50.000 0.00 0.00 0.00 4.35
1963 5511 3.740115 TGCTTCTCCCTACTGTTTTGTC 58.260 45.455 0.00 0.00 0.00 3.18
1964 5512 3.391296 TCTGCTTCTCCCTACTGTTTTGT 59.609 43.478 0.00 0.00 0.00 2.83
1965 5513 3.999663 CTCTGCTTCTCCCTACTGTTTTG 59.000 47.826 0.00 0.00 0.00 2.44
1966 5514 3.008485 CCTCTGCTTCTCCCTACTGTTTT 59.992 47.826 0.00 0.00 0.00 2.43
1967 5515 2.569404 CCTCTGCTTCTCCCTACTGTTT 59.431 50.000 0.00 0.00 0.00 2.83
1968 5516 2.183679 CCTCTGCTTCTCCCTACTGTT 58.816 52.381 0.00 0.00 0.00 3.16
1969 5517 1.359474 TCCTCTGCTTCTCCCTACTGT 59.641 52.381 0.00 0.00 0.00 3.55
1970 5518 1.754226 GTCCTCTGCTTCTCCCTACTG 59.246 57.143 0.00 0.00 0.00 2.74
1971 5519 1.683629 CGTCCTCTGCTTCTCCCTACT 60.684 57.143 0.00 0.00 0.00 2.57
1972 5520 0.741915 CGTCCTCTGCTTCTCCCTAC 59.258 60.000 0.00 0.00 0.00 3.18
1973 5521 1.038130 GCGTCCTCTGCTTCTCCCTA 61.038 60.000 0.00 0.00 0.00 3.53
1999 5562 6.625873 AACAAGGAACATCTCTGTTTTCTC 57.374 37.500 0.00 0.00 45.57 2.87
2050 5613 6.422400 CGTAGGAATAGGATTTCTGAGAAAGC 59.578 42.308 14.33 14.33 0.00 3.51
2091 5654 2.151202 GTCCCCACACAGTACACAATG 58.849 52.381 0.00 0.00 0.00 2.82
2092 5655 1.771854 TGTCCCCACACAGTACACAAT 59.228 47.619 0.00 0.00 0.00 2.71
2093 5656 1.140052 CTGTCCCCACACAGTACACAA 59.860 52.381 0.00 0.00 39.26 3.33
2094 5657 0.756294 CTGTCCCCACACAGTACACA 59.244 55.000 0.00 0.00 39.26 3.72
2095 5658 1.045407 TCTGTCCCCACACAGTACAC 58.955 55.000 0.00 0.00 43.80 2.90
2096 5659 1.623311 CATCTGTCCCCACACAGTACA 59.377 52.381 0.00 0.00 43.80 2.90
2097 5660 1.899814 TCATCTGTCCCCACACAGTAC 59.100 52.381 0.74 0.00 43.80 2.73
2098 5661 2.319025 TCATCTGTCCCCACACAGTA 57.681 50.000 0.74 0.00 43.80 2.74
2099 5662 1.434188 TTCATCTGTCCCCACACAGT 58.566 50.000 0.74 0.00 43.80 3.55
2100 5663 2.154462 GTTTCATCTGTCCCCACACAG 58.846 52.381 0.00 0.00 44.61 3.66
2101 5664 1.492599 TGTTTCATCTGTCCCCACACA 59.507 47.619 0.00 0.00 0.00 3.72
2102 5665 2.154462 CTGTTTCATCTGTCCCCACAC 58.846 52.381 0.00 0.00 0.00 3.82
2103 5666 1.545428 GCTGTTTCATCTGTCCCCACA 60.545 52.381 0.00 0.00 0.00 4.17
2104 5667 1.168714 GCTGTTTCATCTGTCCCCAC 58.831 55.000 0.00 0.00 0.00 4.61
2105 5668 1.067295 AGCTGTTTCATCTGTCCCCA 58.933 50.000 0.00 0.00 0.00 4.96
2106 5669 2.206576 AAGCTGTTTCATCTGTCCCC 57.793 50.000 0.00 0.00 0.00 4.81
2107 5670 4.154918 CACTTAAGCTGTTTCATCTGTCCC 59.845 45.833 1.29 0.00 0.00 4.46
2108 5671 4.154918 CCACTTAAGCTGTTTCATCTGTCC 59.845 45.833 1.29 0.00 0.00 4.02
2109 5672 4.154918 CCCACTTAAGCTGTTTCATCTGTC 59.845 45.833 1.29 0.00 0.00 3.51
2110 5673 4.074970 CCCACTTAAGCTGTTTCATCTGT 58.925 43.478 1.29 0.00 0.00 3.41
2111 5674 4.074970 ACCCACTTAAGCTGTTTCATCTG 58.925 43.478 1.29 0.00 0.00 2.90
2112 5675 4.074970 CACCCACTTAAGCTGTTTCATCT 58.925 43.478 1.29 0.00 0.00 2.90
2113 5676 3.821033 ACACCCACTTAAGCTGTTTCATC 59.179 43.478 1.29 0.00 0.00 2.92
2114 5677 3.832527 ACACCCACTTAAGCTGTTTCAT 58.167 40.909 1.29 0.00 0.00 2.57
2115 5678 3.290948 ACACCCACTTAAGCTGTTTCA 57.709 42.857 1.29 0.00 0.00 2.69
2116 5679 4.359706 CAAACACCCACTTAAGCTGTTTC 58.640 43.478 13.92 0.00 33.75 2.78
2117 5680 3.132111 CCAAACACCCACTTAAGCTGTTT 59.868 43.478 1.29 8.51 35.85 2.83
2118 5681 2.693074 CCAAACACCCACTTAAGCTGTT 59.307 45.455 1.29 2.83 0.00 3.16
2119 5682 2.306847 CCAAACACCCACTTAAGCTGT 58.693 47.619 1.29 0.00 0.00 4.40
2120 5683 2.306847 ACCAAACACCCACTTAAGCTG 58.693 47.619 1.29 0.39 0.00 4.24
2121 5684 2.748209 ACCAAACACCCACTTAAGCT 57.252 45.000 1.29 0.00 0.00 3.74
2122 5685 3.131400 TGAAACCAAACACCCACTTAAGC 59.869 43.478 1.29 0.00 0.00 3.09
2123 5686 4.202111 CCTGAAACCAAACACCCACTTAAG 60.202 45.833 0.00 0.00 0.00 1.85
2124 5687 3.702045 CCTGAAACCAAACACCCACTTAA 59.298 43.478 0.00 0.00 0.00 1.85
2125 5688 3.292460 CCTGAAACCAAACACCCACTTA 58.708 45.455 0.00 0.00 0.00 2.24
2126 5689 2.107366 CCTGAAACCAAACACCCACTT 58.893 47.619 0.00 0.00 0.00 3.16
2127 5690 1.687996 CCCTGAAACCAAACACCCACT 60.688 52.381 0.00 0.00 0.00 4.00
2128 5691 0.750249 CCCTGAAACCAAACACCCAC 59.250 55.000 0.00 0.00 0.00 4.61
2129 5692 0.631753 TCCCTGAAACCAAACACCCA 59.368 50.000 0.00 0.00 0.00 4.51
2130 5693 2.009681 ATCCCTGAAACCAAACACCC 57.990 50.000 0.00 0.00 0.00 4.61
2131 5694 4.415881 AAAATCCCTGAAACCAAACACC 57.584 40.909 0.00 0.00 0.00 4.16
2169 5732 6.361768 TGTTTGGTTTGTTAGGGACTTTTT 57.638 33.333 0.00 0.00 41.75 1.94
2170 5733 5.105106 CCTGTTTGGTTTGTTAGGGACTTTT 60.105 40.000 0.00 0.00 41.75 2.27
2171 5734 4.404394 CCTGTTTGGTTTGTTAGGGACTTT 59.596 41.667 0.00 0.00 41.75 2.66
2172 5735 3.958147 CCTGTTTGGTTTGTTAGGGACTT 59.042 43.478 0.00 0.00 41.75 3.01
2173 5736 3.562182 CCTGTTTGGTTTGTTAGGGACT 58.438 45.455 0.00 0.00 46.37 3.85
2174 5737 2.626266 CCCTGTTTGGTTTGTTAGGGAC 59.374 50.000 0.00 0.00 46.19 4.46
2175 5738 2.425102 CCCCTGTTTGGTTTGTTAGGGA 60.425 50.000 8.64 0.00 46.19 4.20
2176 5739 1.967779 CCCCTGTTTGGTTTGTTAGGG 59.032 52.381 0.00 0.00 43.57 3.53
2177 5740 1.967779 CCCCCTGTTTGGTTTGTTAGG 59.032 52.381 0.00 0.00 0.00 2.69
2178 5741 2.626266 GTCCCCCTGTTTGGTTTGTTAG 59.374 50.000 0.00 0.00 0.00 2.34
2179 5742 2.245287 AGTCCCCCTGTTTGGTTTGTTA 59.755 45.455 0.00 0.00 0.00 2.41
2180 5743 1.007842 AGTCCCCCTGTTTGGTTTGTT 59.992 47.619 0.00 0.00 0.00 2.83
2181 5744 0.634465 AGTCCCCCTGTTTGGTTTGT 59.366 50.000 0.00 0.00 0.00 2.83
2182 5745 1.788229 AAGTCCCCCTGTTTGGTTTG 58.212 50.000 0.00 0.00 0.00 2.93
2183 5746 2.561209 AAAGTCCCCCTGTTTGGTTT 57.439 45.000 0.00 0.00 0.00 3.27
2184 5747 2.561209 AAAAGTCCCCCTGTTTGGTT 57.439 45.000 0.00 0.00 0.00 3.67
2185 5748 2.561209 AAAAAGTCCCCCTGTTTGGT 57.439 45.000 0.00 0.00 29.02 3.67
2211 5774 7.341445 TGCTTCTAAGGACTTTTAGCAAAAA 57.659 32.000 10.79 0.00 32.01 1.94
2212 5775 6.952773 TGCTTCTAAGGACTTTTAGCAAAA 57.047 33.333 10.79 0.00 32.01 2.44
2213 5776 6.714810 TGATGCTTCTAAGGACTTTTAGCAAA 59.285 34.615 14.75 7.73 33.41 3.68
2214 5777 6.149474 GTGATGCTTCTAAGGACTTTTAGCAA 59.851 38.462 14.75 3.13 33.41 3.91
2215 5778 5.643777 GTGATGCTTCTAAGGACTTTTAGCA 59.356 40.000 13.77 13.77 32.01 3.49
2216 5779 5.065346 GGTGATGCTTCTAAGGACTTTTAGC 59.935 44.000 0.88 0.00 32.01 3.09
2217 5780 6.410540 AGGTGATGCTTCTAAGGACTTTTAG 58.589 40.000 0.88 0.00 32.99 1.85
2218 5781 6.374417 AGGTGATGCTTCTAAGGACTTTTA 57.626 37.500 0.88 0.00 0.00 1.52
2219 5782 5.248380 AGGTGATGCTTCTAAGGACTTTT 57.752 39.130 0.88 0.00 0.00 2.27
2220 5783 4.917906 AGGTGATGCTTCTAAGGACTTT 57.082 40.909 0.88 0.00 0.00 2.66
2221 5784 4.917906 AAGGTGATGCTTCTAAGGACTT 57.082 40.909 0.88 0.00 0.00 3.01
2222 5785 5.721960 TCTTAAGGTGATGCTTCTAAGGACT 59.278 40.000 1.85 0.00 0.00 3.85
2223 5786 5.978814 TCTTAAGGTGATGCTTCTAAGGAC 58.021 41.667 1.85 0.00 0.00 3.85
2224 5787 5.721960 ACTCTTAAGGTGATGCTTCTAAGGA 59.278 40.000 1.85 0.00 0.00 3.36
2225 5788 5.983540 ACTCTTAAGGTGATGCTTCTAAGG 58.016 41.667 1.85 0.00 0.00 2.69
2226 5789 6.872920 AGACTCTTAAGGTGATGCTTCTAAG 58.127 40.000 1.85 1.48 0.00 2.18
2227 5790 6.859112 AGACTCTTAAGGTGATGCTTCTAA 57.141 37.500 1.85 0.00 0.00 2.10
2228 5791 6.859112 AAGACTCTTAAGGTGATGCTTCTA 57.141 37.500 1.85 0.00 0.00 2.10
2229 5792 5.753721 AAGACTCTTAAGGTGATGCTTCT 57.246 39.130 1.85 0.00 0.00 2.85
2230 5793 6.809630 AAAAGACTCTTAAGGTGATGCTTC 57.190 37.500 1.85 0.00 0.00 3.86
2261 5824 8.217131 CTAGGACTTTTTCTAGTCTCTAGGAC 57.783 42.308 14.69 3.84 43.26 3.85
2263 5826 7.576861 CCTAGGACTTTTTCTAGTCTCTAGG 57.423 44.000 20.92 20.92 46.02 3.02
2264 5827 8.217131 GTCCTAGGACTTTTTCTAGTCTCTAG 57.783 42.308 31.12 15.13 43.26 2.43
2280 5843 5.699915 GTGTTTGGTTTTCTAGTCCTAGGAC 59.300 44.000 31.29 31.29 44.86 3.85
2281 5844 5.221783 GGTGTTTGGTTTTCTAGTCCTAGGA 60.222 44.000 7.62 7.62 34.06 2.94
2282 5845 5.001874 GGTGTTTGGTTTTCTAGTCCTAGG 58.998 45.833 0.82 0.82 34.06 3.02
2283 5846 5.469084 GTGGTGTTTGGTTTTCTAGTCCTAG 59.531 44.000 0.00 0.00 34.56 3.02
2284 5847 5.370679 GTGGTGTTTGGTTTTCTAGTCCTA 58.629 41.667 0.00 0.00 0.00 2.94
2285 5848 4.204799 GTGGTGTTTGGTTTTCTAGTCCT 58.795 43.478 0.00 0.00 0.00 3.85
2286 5849 3.317149 GGTGGTGTTTGGTTTTCTAGTCC 59.683 47.826 0.00 0.00 0.00 3.85
2287 5850 4.204799 AGGTGGTGTTTGGTTTTCTAGTC 58.795 43.478 0.00 0.00 0.00 2.59
2288 5851 4.245251 AGGTGGTGTTTGGTTTTCTAGT 57.755 40.909 0.00 0.00 0.00 2.57
2289 5852 6.059484 TCTTAGGTGGTGTTTGGTTTTCTAG 58.941 40.000 0.00 0.00 0.00 2.43
2290 5853 6.003859 TCTTAGGTGGTGTTTGGTTTTCTA 57.996 37.500 0.00 0.00 0.00 2.10
2291 5854 4.862371 TCTTAGGTGGTGTTTGGTTTTCT 58.138 39.130 0.00 0.00 0.00 2.52
2292 5855 5.562113 CGATCTTAGGTGGTGTTTGGTTTTC 60.562 44.000 0.00 0.00 0.00 2.29
2293 5856 4.277423 CGATCTTAGGTGGTGTTTGGTTTT 59.723 41.667 0.00 0.00 0.00 2.43
2294 5857 3.818773 CGATCTTAGGTGGTGTTTGGTTT 59.181 43.478 0.00 0.00 0.00 3.27
2295 5858 3.408634 CGATCTTAGGTGGTGTTTGGTT 58.591 45.455 0.00 0.00 0.00 3.67
2296 5859 2.874457 GCGATCTTAGGTGGTGTTTGGT 60.874 50.000 0.00 0.00 0.00 3.67
2297 5860 1.737793 GCGATCTTAGGTGGTGTTTGG 59.262 52.381 0.00 0.00 0.00 3.28
2298 5861 2.416547 CTGCGATCTTAGGTGGTGTTTG 59.583 50.000 0.00 0.00 0.00 2.93
2299 5862 2.615493 CCTGCGATCTTAGGTGGTGTTT 60.615 50.000 4.42 0.00 0.00 2.83
2300 5863 1.066143 CCTGCGATCTTAGGTGGTGTT 60.066 52.381 4.42 0.00 0.00 3.32
2301 5864 0.537188 CCTGCGATCTTAGGTGGTGT 59.463 55.000 4.42 0.00 0.00 4.16
2302 5865 0.824109 TCCTGCGATCTTAGGTGGTG 59.176 55.000 10.75 0.00 35.54 4.17
2303 5866 1.115467 CTCCTGCGATCTTAGGTGGT 58.885 55.000 10.75 0.00 35.54 4.16
2304 5867 1.115467 ACTCCTGCGATCTTAGGTGG 58.885 55.000 14.68 10.39 35.54 4.61
2305 5868 1.202463 CCACTCCTGCGATCTTAGGTG 60.202 57.143 10.75 10.75 35.54 4.00
2306 5869 1.115467 CCACTCCTGCGATCTTAGGT 58.885 55.000 10.75 0.00 35.54 3.08
2307 5870 1.067821 GACCACTCCTGCGATCTTAGG 59.932 57.143 5.92 5.92 35.34 2.69
2308 5871 1.751351 TGACCACTCCTGCGATCTTAG 59.249 52.381 0.00 0.00 0.00 2.18
2309 5872 1.847328 TGACCACTCCTGCGATCTTA 58.153 50.000 0.00 0.00 0.00 2.10
2310 5873 1.137872 GATGACCACTCCTGCGATCTT 59.862 52.381 0.00 0.00 0.00 2.40
2311 5874 0.749649 GATGACCACTCCTGCGATCT 59.250 55.000 0.00 0.00 0.00 2.75
2312 5875 0.596083 CGATGACCACTCCTGCGATC 60.596 60.000 0.00 0.00 0.00 3.69
2313 5876 1.323271 ACGATGACCACTCCTGCGAT 61.323 55.000 0.00 0.00 0.00 4.58
2314 5877 1.934220 GACGATGACCACTCCTGCGA 61.934 60.000 0.00 0.00 0.00 5.10
2315 5878 1.517257 GACGATGACCACTCCTGCG 60.517 63.158 0.00 0.00 0.00 5.18
2316 5879 0.737715 GTGACGATGACCACTCCTGC 60.738 60.000 0.00 0.00 0.00 4.85
2317 5880 0.603065 TGTGACGATGACCACTCCTG 59.397 55.000 0.00 0.00 34.57 3.86
2318 5881 1.561643 ATGTGACGATGACCACTCCT 58.438 50.000 0.00 0.00 34.57 3.69
2319 5882 2.002586 CAATGTGACGATGACCACTCC 58.997 52.381 0.00 0.00 34.57 3.85
2320 5883 2.688507 ACAATGTGACGATGACCACTC 58.311 47.619 0.00 0.00 34.57 3.51
2321 5884 2.839486 ACAATGTGACGATGACCACT 57.161 45.000 0.00 0.00 34.57 4.00
2322 5885 3.896648 AAACAATGTGACGATGACCAC 57.103 42.857 0.00 0.00 0.00 4.16
2323 5886 4.909696 AAAAACAATGTGACGATGACCA 57.090 36.364 0.00 0.00 0.00 4.02
2341 5904 3.846360 TCGAAAGTTTTTCCGGCAAAAA 58.154 36.364 13.69 15.02 40.93 1.94
2342 5905 3.505464 TCGAAAGTTTTTCCGGCAAAA 57.495 38.095 7.98 7.98 31.73 2.44
2343 5906 3.316868 AGATCGAAAGTTTTTCCGGCAAA 59.683 39.130 0.00 0.00 0.00 3.68
2344 5907 2.882137 AGATCGAAAGTTTTTCCGGCAA 59.118 40.909 0.00 0.00 0.00 4.52
2345 5908 2.500229 AGATCGAAAGTTTTTCCGGCA 58.500 42.857 0.00 0.00 0.00 5.69
2346 5909 4.877323 ATAGATCGAAAGTTTTTCCGGC 57.123 40.909 0.00 0.00 0.00 6.13
2347 5910 6.417191 TGAATAGATCGAAAGTTTTTCCGG 57.583 37.500 0.00 0.00 0.00 5.14
2348 5911 9.982291 TTAATGAATAGATCGAAAGTTTTTCCG 57.018 29.630 0.00 0.00 0.00 4.30
2373 5936 9.561069 AGAATCTGTTGTACTAACTTGACAATT 57.439 29.630 0.00 0.00 35.65 2.32
2376 5939 9.639601 CATAGAATCTGTTGTACTAACTTGACA 57.360 33.333 0.00 0.00 0.00 3.58
2377 5940 9.640963 ACATAGAATCTGTTGTACTAACTTGAC 57.359 33.333 0.00 0.00 0.00 3.18
2405 5968 9.201989 ACTCAGAAGACTACATGGTATAATTCA 57.798 33.333 0.00 0.00 0.00 2.57
2409 5972 9.470399 TGTAACTCAGAAGACTACATGGTATAA 57.530 33.333 0.00 0.00 0.00 0.98
2410 5973 9.470399 TTGTAACTCAGAAGACTACATGGTATA 57.530 33.333 0.00 0.00 30.16 1.47
2411 5974 7.956328 TGTAACTCAGAAGACTACATGGTAT 57.044 36.000 0.00 0.00 0.00 2.73
2412 5975 7.577046 GCTTGTAACTCAGAAGACTACATGGTA 60.577 40.741 0.00 0.00 28.79 3.25
2413 5976 6.665992 TTGTAACTCAGAAGACTACATGGT 57.334 37.500 0.00 0.00 30.16 3.55
2414 5977 5.578727 GCTTGTAACTCAGAAGACTACATGG 59.421 44.000 0.00 0.00 28.79 3.66
2415 5978 6.309980 CAGCTTGTAACTCAGAAGACTACATG 59.690 42.308 0.00 0.00 28.79 3.21
2416 5979 6.209589 TCAGCTTGTAACTCAGAAGACTACAT 59.790 38.462 0.00 0.00 28.79 2.29
2417 5980 5.535030 TCAGCTTGTAACTCAGAAGACTACA 59.465 40.000 0.00 0.00 28.79 2.74
2418 5981 5.859648 GTCAGCTTGTAACTCAGAAGACTAC 59.140 44.000 0.00 0.00 28.79 2.73
2419 5982 5.535030 TGTCAGCTTGTAACTCAGAAGACTA 59.465 40.000 0.00 0.00 28.79 2.59
2420 5983 4.342378 TGTCAGCTTGTAACTCAGAAGACT 59.658 41.667 0.00 0.00 28.79 3.24
2421 5984 4.621991 TGTCAGCTTGTAACTCAGAAGAC 58.378 43.478 0.00 0.00 28.79 3.01
2422 5985 4.797604 GCTGTCAGCTTGTAACTCAGAAGA 60.798 45.833 17.89 0.00 38.45 2.87
2423 5986 3.431572 GCTGTCAGCTTGTAACTCAGAAG 59.568 47.826 17.89 0.00 38.45 2.85
2424 5987 3.393800 GCTGTCAGCTTGTAACTCAGAA 58.606 45.455 17.89 0.00 38.45 3.02
2425 5988 3.032017 GCTGTCAGCTTGTAACTCAGA 57.968 47.619 17.89 0.00 38.45 3.27
2437 6000 5.467063 ACTTAAAAGACTACAAGCTGTCAGC 59.533 40.000 17.48 17.48 42.84 4.26
2438 6001 8.589335 TTACTTAAAAGACTACAAGCTGTCAG 57.411 34.615 4.89 0.00 35.81 3.51
2439 6002 9.555727 AATTACTTAAAAGACTACAAGCTGTCA 57.444 29.630 4.89 0.00 35.81 3.58
2441 6004 8.709646 CGAATTACTTAAAAGACTACAAGCTGT 58.290 33.333 0.00 0.00 0.00 4.40
2442 6005 8.709646 ACGAATTACTTAAAAGACTACAAGCTG 58.290 33.333 0.00 0.00 0.00 4.24
2443 6006 8.709646 CACGAATTACTTAAAAGACTACAAGCT 58.290 33.333 0.00 0.00 0.00 3.74
2444 6007 8.706035 TCACGAATTACTTAAAAGACTACAAGC 58.294 33.333 0.00 0.00 0.00 4.01
2446 6009 9.970395 TCTCACGAATTACTTAAAAGACTACAA 57.030 29.630 0.00 0.00 0.00 2.41
2447 6010 9.970395 TTCTCACGAATTACTTAAAAGACTACA 57.030 29.630 0.00 0.00 0.00 2.74
2467 6030 1.375908 TGCATGAGGGCGTTCTCAC 60.376 57.895 11.02 2.62 45.27 3.51
2468 6031 1.375908 GTGCATGAGGGCGTTCTCA 60.376 57.895 11.16 11.16 46.32 3.27
2469 6032 0.674895 AAGTGCATGAGGGCGTTCTC 60.675 55.000 0.00 1.11 36.28 2.87
2470 6033 0.250901 AAAGTGCATGAGGGCGTTCT 60.251 50.000 0.00 0.00 36.28 3.01
2471 6034 0.109597 CAAAGTGCATGAGGGCGTTC 60.110 55.000 0.00 0.00 36.28 3.95
2472 6035 1.526575 CCAAAGTGCATGAGGGCGTT 61.527 55.000 0.00 0.00 36.28 4.84
2473 6036 1.973281 CCAAAGTGCATGAGGGCGT 60.973 57.895 0.00 0.00 36.28 5.68
2474 6037 1.033746 ATCCAAAGTGCATGAGGGCG 61.034 55.000 0.00 0.00 36.28 6.13
2475 6038 0.743097 GATCCAAAGTGCATGAGGGC 59.257 55.000 0.00 0.00 0.00 5.19
2476 6039 2.426024 CAAGATCCAAAGTGCATGAGGG 59.574 50.000 0.00 0.00 0.00 4.30
2477 6040 3.349927 TCAAGATCCAAAGTGCATGAGG 58.650 45.455 0.00 0.00 0.00 3.86
2478 6041 5.450137 GGATTCAAGATCCAAAGTGCATGAG 60.450 44.000 0.00 0.00 38.09 2.90
2479 6042 4.400251 GGATTCAAGATCCAAAGTGCATGA 59.600 41.667 0.00 0.00 38.09 3.07
2480 6043 4.401519 AGGATTCAAGATCCAAAGTGCATG 59.598 41.667 7.71 0.00 40.61 4.06
2481 6044 4.607239 AGGATTCAAGATCCAAAGTGCAT 58.393 39.130 7.71 0.00 40.61 3.96
2482 6045 4.038271 AGGATTCAAGATCCAAAGTGCA 57.962 40.909 7.71 0.00 40.61 4.57
2483 6046 6.151817 ACTTTAGGATTCAAGATCCAAAGTGC 59.848 38.462 21.29 0.00 41.82 4.40
2484 6047 7.533426 CACTTTAGGATTCAAGATCCAAAGTG 58.467 38.462 26.21 26.21 45.96 3.16
2485 6048 7.234355 ACACTTTAGGATTCAAGATCCAAAGT 58.766 34.615 18.87 18.87 42.80 2.66
2486 6049 7.693969 ACACTTTAGGATTCAAGATCCAAAG 57.306 36.000 18.10 18.10 40.61 2.77
2487 6050 8.359642 CAAACACTTTAGGATTCAAGATCCAAA 58.640 33.333 7.71 5.54 40.61 3.28
2488 6051 7.523709 GCAAACACTTTAGGATTCAAGATCCAA 60.524 37.037 7.71 0.00 40.61 3.53
2489 6052 6.071952 GCAAACACTTTAGGATTCAAGATCCA 60.072 38.462 7.71 0.00 40.61 3.41
2490 6053 6.151817 AGCAAACACTTTAGGATTCAAGATCC 59.848 38.462 0.00 0.00 38.47 3.36
2491 6054 7.120432 AGAGCAAACACTTTAGGATTCAAGATC 59.880 37.037 0.00 0.00 0.00 2.75
2492 6055 6.944862 AGAGCAAACACTTTAGGATTCAAGAT 59.055 34.615 0.00 0.00 0.00 2.40
2493 6056 6.299141 AGAGCAAACACTTTAGGATTCAAGA 58.701 36.000 0.00 0.00 0.00 3.02
2494 6057 6.205464 TGAGAGCAAACACTTTAGGATTCAAG 59.795 38.462 0.00 0.00 0.00 3.02
2495 6058 6.017109 GTGAGAGCAAACACTTTAGGATTCAA 60.017 38.462 0.00 0.00 34.65 2.69
2496 6059 5.470098 GTGAGAGCAAACACTTTAGGATTCA 59.530 40.000 0.00 0.00 34.65 2.57
2497 6060 5.389935 CGTGAGAGCAAACACTTTAGGATTC 60.390 44.000 0.00 0.00 35.23 2.52
2498 6061 4.452455 CGTGAGAGCAAACACTTTAGGATT 59.548 41.667 0.00 0.00 35.23 3.01
2499 6062 3.997021 CGTGAGAGCAAACACTTTAGGAT 59.003 43.478 0.00 0.00 35.23 3.24
2500 6063 3.181469 ACGTGAGAGCAAACACTTTAGGA 60.181 43.478 0.00 0.00 35.23 2.94
2501 6064 3.131396 ACGTGAGAGCAAACACTTTAGG 58.869 45.455 0.00 0.00 35.23 2.69
2502 6065 5.062308 GGATACGTGAGAGCAAACACTTTAG 59.938 44.000 0.00 0.00 35.23 1.85
2503 6066 4.927425 GGATACGTGAGAGCAAACACTTTA 59.073 41.667 0.00 0.00 35.23 1.85
2504 6067 3.746492 GGATACGTGAGAGCAAACACTTT 59.254 43.478 0.00 0.00 35.23 2.66
2505 6068 3.326747 GGATACGTGAGAGCAAACACTT 58.673 45.455 0.00 0.00 35.23 3.16
2506 6069 2.353803 GGGATACGTGAGAGCAAACACT 60.354 50.000 0.00 0.00 35.23 3.55
2507 6070 2.000447 GGGATACGTGAGAGCAAACAC 59.000 52.381 0.00 0.00 37.60 3.32
2508 6071 1.899814 AGGGATACGTGAGAGCAAACA 59.100 47.619 0.00 0.00 37.60 2.83
2509 6072 2.166664 AGAGGGATACGTGAGAGCAAAC 59.833 50.000 0.00 0.00 37.60 2.93
2510 6073 2.166459 CAGAGGGATACGTGAGAGCAAA 59.834 50.000 0.00 0.00 37.60 3.68
2511 6074 1.751351 CAGAGGGATACGTGAGAGCAA 59.249 52.381 0.00 0.00 37.60 3.91
2512 6075 1.064685 TCAGAGGGATACGTGAGAGCA 60.065 52.381 0.00 0.00 37.60 4.26
2513 6076 1.606668 CTCAGAGGGATACGTGAGAGC 59.393 57.143 0.00 0.00 40.29 4.09
2514 6077 1.606668 GCTCAGAGGGATACGTGAGAG 59.393 57.143 0.00 0.00 40.29 3.20
2515 6078 1.681538 GCTCAGAGGGATACGTGAGA 58.318 55.000 0.00 0.00 40.29 3.27
2516 6079 0.671251 GGCTCAGAGGGATACGTGAG 59.329 60.000 0.00 0.00 40.62 3.51
2517 6080 0.033503 TGGCTCAGAGGGATACGTGA 60.034 55.000 0.00 0.00 37.60 4.35
2518 6081 0.824109 TTGGCTCAGAGGGATACGTG 59.176 55.000 0.00 0.00 37.60 4.49
2519 6082 1.568504 TTTGGCTCAGAGGGATACGT 58.431 50.000 0.00 0.00 37.60 3.57
2520 6083 2.918712 ATTTGGCTCAGAGGGATACG 57.081 50.000 0.00 0.00 37.60 3.06
2521 6084 4.689612 TGTATTTGGCTCAGAGGGATAC 57.310 45.455 0.00 0.00 0.00 2.24
2522 6085 4.444876 GCTTGTATTTGGCTCAGAGGGATA 60.445 45.833 0.00 0.00 0.00 2.59
2523 6086 3.686691 GCTTGTATTTGGCTCAGAGGGAT 60.687 47.826 0.00 0.00 0.00 3.85
2524 6087 2.356125 GCTTGTATTTGGCTCAGAGGGA 60.356 50.000 0.00 0.00 0.00 4.20
2525 6088 2.019984 GCTTGTATTTGGCTCAGAGGG 58.980 52.381 0.00 0.00 0.00 4.30
2526 6089 2.681848 CAGCTTGTATTTGGCTCAGAGG 59.318 50.000 0.00 0.00 33.74 3.69
2527 6090 2.681848 CCAGCTTGTATTTGGCTCAGAG 59.318 50.000 0.00 0.00 33.74 3.35
2528 6091 2.715046 CCAGCTTGTATTTGGCTCAGA 58.285 47.619 0.00 0.00 33.74 3.27
2534 6097 3.006940 TCTTACGCCAGCTTGTATTTGG 58.993 45.455 0.00 0.00 35.06 3.28
2535 6098 4.678509 TTCTTACGCCAGCTTGTATTTG 57.321 40.909 0.00 0.00 0.00 2.32
2536 6099 4.156008 CCTTTCTTACGCCAGCTTGTATTT 59.844 41.667 0.00 0.00 0.00 1.40
2537 6100 3.689649 CCTTTCTTACGCCAGCTTGTATT 59.310 43.478 0.00 0.00 0.00 1.89
2538 6101 3.270877 CCTTTCTTACGCCAGCTTGTAT 58.729 45.455 0.00 0.00 0.00 2.29
2539 6102 2.038033 ACCTTTCTTACGCCAGCTTGTA 59.962 45.455 0.00 0.00 0.00 2.41
2540 6103 1.202770 ACCTTTCTTACGCCAGCTTGT 60.203 47.619 0.00 0.00 0.00 3.16
2541 6104 1.523758 ACCTTTCTTACGCCAGCTTG 58.476 50.000 0.00 0.00 0.00 4.01
2542 6105 2.271944 AACCTTTCTTACGCCAGCTT 57.728 45.000 0.00 0.00 0.00 3.74
2543 6106 1.880027 CAAACCTTTCTTACGCCAGCT 59.120 47.619 0.00 0.00 0.00 4.24
2544 6107 1.666023 GCAAACCTTTCTTACGCCAGC 60.666 52.381 0.00 0.00 0.00 4.85
2545 6108 1.880027 AGCAAACCTTTCTTACGCCAG 59.120 47.619 0.00 0.00 0.00 4.85
2546 6109 1.877443 GAGCAAACCTTTCTTACGCCA 59.123 47.619 0.00 0.00 0.00 5.69
2547 6110 1.136057 CGAGCAAACCTTTCTTACGCC 60.136 52.381 0.00 0.00 0.00 5.68
2548 6111 1.136057 CCGAGCAAACCTTTCTTACGC 60.136 52.381 0.00 0.00 0.00 4.42
2549 6112 1.463444 CCCGAGCAAACCTTTCTTACG 59.537 52.381 0.00 0.00 0.00 3.18
2550 6113 2.483106 GTCCCGAGCAAACCTTTCTTAC 59.517 50.000 0.00 0.00 0.00 2.34
2551 6114 2.774687 GTCCCGAGCAAACCTTTCTTA 58.225 47.619 0.00 0.00 0.00 2.10
2552 6115 1.605753 GTCCCGAGCAAACCTTTCTT 58.394 50.000 0.00 0.00 0.00 2.52
2553 6116 0.602905 CGTCCCGAGCAAACCTTTCT 60.603 55.000 0.00 0.00 0.00 2.52
2554 6117 1.574702 CCGTCCCGAGCAAACCTTTC 61.575 60.000 0.00 0.00 0.00 2.62
2555 6118 1.599797 CCGTCCCGAGCAAACCTTT 60.600 57.895 0.00 0.00 0.00 3.11
2556 6119 2.032071 CCGTCCCGAGCAAACCTT 59.968 61.111 0.00 0.00 0.00 3.50
2557 6120 4.699522 GCCGTCCCGAGCAAACCT 62.700 66.667 0.00 0.00 0.00 3.50
2559 6122 2.975799 TTGCCGTCCCGAGCAAAC 60.976 61.111 9.11 0.00 45.51 2.93
2562 6125 2.033448 AAATTGCCGTCCCGAGCA 59.967 55.556 0.00 0.00 37.18 4.26
2563 6126 1.582610 TTCAAATTGCCGTCCCGAGC 61.583 55.000 0.00 0.00 0.00 5.03
2564 6127 0.168128 GTTCAAATTGCCGTCCCGAG 59.832 55.000 0.00 0.00 0.00 4.63
2565 6128 2.249692 GTTCAAATTGCCGTCCCGA 58.750 52.632 0.00 0.00 0.00 5.14
2566 6129 4.859784 GTTCAAATTGCCGTCCCG 57.140 55.556 0.00 0.00 0.00 5.14


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.