Multiple sequence alignment - TraesCS1D01G430100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G430100 chr1D 100.000 3382 0 0 1 3382 481379711 481376330 0.000000e+00 6246.0
1 TraesCS1D01G430100 chr1D 77.415 673 110 23 2607 3249 236435092 236434432 2.480000e-96 363.0
2 TraesCS1D01G430100 chr1B 95.052 2203 72 6 1 2180 669750511 669748323 0.000000e+00 3430.0
3 TraesCS1D01G430100 chr1B 74.912 857 169 27 2440 3256 620931307 620932157 1.930000e-92 350.0
4 TraesCS1D01G430100 chr1A 94.384 2208 92 8 1 2180 577837021 577834818 0.000000e+00 3362.0
5 TraesCS1D01G430100 chr6B 79.379 2221 400 29 1 2171 25276598 25278810 0.000000e+00 1511.0
6 TraesCS1D01G430100 chr6B 75.576 651 110 27 2640 3256 481264617 481263982 3.320000e-70 276.0
7 TraesCS1D01G430100 chr6B 75.106 470 70 27 2811 3256 296457691 296458137 3.470000e-40 176.0
8 TraesCS1D01G430100 chrUn 79.871 2017 348 28 213 2179 71292498 71290490 0.000000e+00 1423.0
9 TraesCS1D01G430100 chr6D 80.265 1890 324 28 1 1856 13909382 13911256 0.000000e+00 1378.0
10 TraesCS1D01G430100 chr6D 71.849 849 192 30 2448 3264 36682954 36683787 2.060000e-47 200.0
11 TraesCS1D01G430100 chr2B 74.141 1106 260 20 142 1230 79675375 79674279 5.180000e-118 435.0
12 TraesCS1D01G430100 chr2B 73.803 1107 262 23 142 1230 79680822 79679726 2.430000e-111 412.0
13 TraesCS1D01G430100 chr2B 74.877 816 138 43 2465 3250 157697158 157697936 3.280000e-80 309.0
14 TraesCS1D01G430100 chr2A 74.013 1089 256 24 159 1230 52563284 52562206 5.220000e-113 418.0
15 TraesCS1D01G430100 chr2A 72.527 1001 246 22 245 1223 52756781 52757774 7.090000e-77 298.0
16 TraesCS1D01G430100 chr2D 75.194 903 196 22 142 1026 51143709 51142817 5.260000e-108 401.0
17 TraesCS1D01G430100 chr5A 72.727 693 139 33 2608 3268 674333653 674334327 1.600000e-43 187.0
18 TraesCS1D01G430100 chr4D 79.888 179 25 7 3030 3206 109055520 109055689 1.650000e-23 121.0
19 TraesCS1D01G430100 chr3A 98.148 54 1 0 3030 3083 621695786 621695839 9.990000e-16 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G430100 chr1D 481376330 481379711 3381 True 6246 6246 100.000 1 3382 1 chr1D.!!$R2 3381
1 TraesCS1D01G430100 chr1D 236434432 236435092 660 True 363 363 77.415 2607 3249 1 chr1D.!!$R1 642
2 TraesCS1D01G430100 chr1B 669748323 669750511 2188 True 3430 3430 95.052 1 2180 1 chr1B.!!$R1 2179
3 TraesCS1D01G430100 chr1B 620931307 620932157 850 False 350 350 74.912 2440 3256 1 chr1B.!!$F1 816
4 TraesCS1D01G430100 chr1A 577834818 577837021 2203 True 3362 3362 94.384 1 2180 1 chr1A.!!$R1 2179
5 TraesCS1D01G430100 chr6B 25276598 25278810 2212 False 1511 1511 79.379 1 2171 1 chr6B.!!$F1 2170
6 TraesCS1D01G430100 chr6B 481263982 481264617 635 True 276 276 75.576 2640 3256 1 chr6B.!!$R1 616
7 TraesCS1D01G430100 chrUn 71290490 71292498 2008 True 1423 1423 79.871 213 2179 1 chrUn.!!$R1 1966
8 TraesCS1D01G430100 chr6D 13909382 13911256 1874 False 1378 1378 80.265 1 1856 1 chr6D.!!$F1 1855
9 TraesCS1D01G430100 chr2B 79674279 79675375 1096 True 435 435 74.141 142 1230 1 chr2B.!!$R1 1088
10 TraesCS1D01G430100 chr2B 79679726 79680822 1096 True 412 412 73.803 142 1230 1 chr2B.!!$R2 1088
11 TraesCS1D01G430100 chr2B 157697158 157697936 778 False 309 309 74.877 2465 3250 1 chr2B.!!$F1 785
12 TraesCS1D01G430100 chr2A 52562206 52563284 1078 True 418 418 74.013 159 1230 1 chr2A.!!$R1 1071
13 TraesCS1D01G430100 chr2A 52756781 52757774 993 False 298 298 72.527 245 1223 1 chr2A.!!$F1 978
14 TraesCS1D01G430100 chr2D 51142817 51143709 892 True 401 401 75.194 142 1026 1 chr2D.!!$R1 884

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
739 755 0.460284 GACGATGAAGACGGGCATGT 60.460 55.0 0.0 0.0 34.93 3.21 F
2158 2239 0.246635 GCTGGTGTTCTCGAAGGCTA 59.753 55.0 0.0 0.0 0.00 3.93 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2183 2264 0.034896 CGGTTGTACTGCCCTGAACT 59.965 55.0 0.0 0.0 0.00 3.01 R
2962 3065 0.179234 TTGTTGAGCCCAAGACGACA 59.821 50.0 0.0 0.0 32.06 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
51 52 5.590530 TTGGTGGGATGTGTATAAATTGC 57.409 39.130 0.00 0.00 0.00 3.56
136 137 3.251972 GCATCATTAGCCAACCTCTTAGC 59.748 47.826 0.00 0.00 0.00 3.09
450 463 0.816421 CAAGAAACCGGGGTTCGTGT 60.816 55.000 26.35 11.68 37.35 4.49
590 603 1.324383 TGCTCGATACCGGCATCTAA 58.676 50.000 12.85 0.26 37.17 2.10
647 660 4.293671 CCCCCGGCAAGGTGGAAA 62.294 66.667 0.00 0.00 38.74 3.13
698 711 2.456119 GCTCATCGGTGCCAAGTCG 61.456 63.158 0.00 0.00 0.00 4.18
739 755 0.460284 GACGATGAAGACGGGCATGT 60.460 55.000 0.00 0.00 34.93 3.21
747 765 1.301716 GACGGGCATGTCACACACT 60.302 57.895 0.00 0.00 38.75 3.55
756 774 2.998316 TGTCACACACTTCATCCACA 57.002 45.000 0.00 0.00 0.00 4.17
849 873 1.544537 GGTGCCCATATCGCCATGTAA 60.545 52.381 0.00 0.00 34.38 2.41
1094 1129 1.347707 ACCATGGTTGATCACAGTCGT 59.652 47.619 13.00 0.00 0.00 4.34
1346 1384 2.443390 GGCCGGGGTAGTGCTAGA 60.443 66.667 2.18 0.00 0.00 2.43
1416 1466 2.502510 GTGGTGCAAATGAGCGCG 60.503 61.111 0.00 0.00 45.61 6.86
1417 1467 4.403137 TGGTGCAAATGAGCGCGC 62.403 61.111 26.66 26.66 45.61 6.86
1734 1793 1.213619 TGCATCCTGATTGGTCCCCA 61.214 55.000 0.00 0.00 37.07 4.96
2031 2108 1.926511 CTGTGCCATTGAAGCCGACC 61.927 60.000 0.00 0.00 0.00 4.79
2078 2155 2.124736 CGTCGGGCCACCATCATT 60.125 61.111 4.39 0.00 36.13 2.57
2158 2239 0.246635 GCTGGTGTTCTCGAAGGCTA 59.753 55.000 0.00 0.00 0.00 3.93
2171 2252 2.360801 CGAAGGCTAGGGAGAAGAAGAG 59.639 54.545 0.00 0.00 0.00 2.85
2172 2253 1.788229 AGGCTAGGGAGAAGAAGAGC 58.212 55.000 0.00 0.00 0.00 4.09
2173 2254 1.007721 AGGCTAGGGAGAAGAAGAGCA 59.992 52.381 0.00 0.00 0.00 4.26
2174 2255 1.412343 GGCTAGGGAGAAGAAGAGCAG 59.588 57.143 0.00 0.00 0.00 4.24
2175 2256 2.107366 GCTAGGGAGAAGAAGAGCAGT 58.893 52.381 0.00 0.00 0.00 4.40
2176 2257 2.499693 GCTAGGGAGAAGAAGAGCAGTT 59.500 50.000 0.00 0.00 0.00 3.16
2177 2258 3.430236 GCTAGGGAGAAGAAGAGCAGTTC 60.430 52.174 0.00 0.00 0.00 3.01
2178 2259 2.614259 AGGGAGAAGAAGAGCAGTTCA 58.386 47.619 1.40 0.00 0.00 3.18
2179 2260 2.566724 AGGGAGAAGAAGAGCAGTTCAG 59.433 50.000 1.40 0.00 0.00 3.02
2180 2261 2.354604 GGGAGAAGAAGAGCAGTTCAGG 60.355 54.545 1.40 0.00 0.00 3.86
2181 2262 2.354604 GGAGAAGAAGAGCAGTTCAGGG 60.355 54.545 1.40 0.00 0.00 4.45
2182 2263 1.003003 AGAAGAAGAGCAGTTCAGGGC 59.997 52.381 1.40 0.00 0.00 5.19
2183 2264 0.767375 AAGAAGAGCAGTTCAGGGCA 59.233 50.000 1.40 0.00 0.00 5.36
2184 2265 0.324285 AGAAGAGCAGTTCAGGGCAG 59.676 55.000 1.40 0.00 0.00 4.85
2185 2266 0.036022 GAAGAGCAGTTCAGGGCAGT 59.964 55.000 0.00 0.00 0.00 4.40
2186 2267 0.475906 AAGAGCAGTTCAGGGCAGTT 59.524 50.000 0.00 0.00 0.00 3.16
2187 2268 0.036022 AGAGCAGTTCAGGGCAGTTC 59.964 55.000 0.00 0.00 0.00 3.01
2188 2269 0.250467 GAGCAGTTCAGGGCAGTTCA 60.250 55.000 0.00 0.00 0.00 3.18
2189 2270 0.250640 AGCAGTTCAGGGCAGTTCAG 60.251 55.000 0.00 0.00 0.00 3.02
2190 2271 1.239968 GCAGTTCAGGGCAGTTCAGG 61.240 60.000 0.00 0.00 0.00 3.86
2191 2272 0.607489 CAGTTCAGGGCAGTTCAGGG 60.607 60.000 0.00 0.00 0.00 4.45
2192 2273 1.973812 GTTCAGGGCAGTTCAGGGC 60.974 63.158 0.00 0.00 0.00 5.19
2193 2274 2.459969 TTCAGGGCAGTTCAGGGCA 61.460 57.895 0.00 0.00 0.00 5.36
2194 2275 2.360852 CAGGGCAGTTCAGGGCAG 60.361 66.667 0.00 0.00 0.00 4.85
2195 2276 2.856000 AGGGCAGTTCAGGGCAGT 60.856 61.111 0.00 0.00 0.00 4.40
2196 2277 1.538876 AGGGCAGTTCAGGGCAGTA 60.539 57.895 0.00 0.00 0.00 2.74
2197 2278 1.377333 GGGCAGTTCAGGGCAGTAC 60.377 63.158 0.00 0.00 0.00 2.73
2198 2279 1.374947 GGCAGTTCAGGGCAGTACA 59.625 57.895 0.00 0.00 0.00 2.90
2199 2280 0.250727 GGCAGTTCAGGGCAGTACAA 60.251 55.000 0.00 0.00 0.00 2.41
2200 2281 0.875059 GCAGTTCAGGGCAGTACAAC 59.125 55.000 0.00 0.00 0.00 3.32
2201 2282 1.523758 CAGTTCAGGGCAGTACAACC 58.476 55.000 0.00 0.00 0.00 3.77
2202 2283 0.034896 AGTTCAGGGCAGTACAACCG 59.965 55.000 0.00 0.00 0.00 4.44
2203 2284 0.953960 GTTCAGGGCAGTACAACCGG 60.954 60.000 0.00 0.00 0.00 5.28
2204 2285 1.122632 TTCAGGGCAGTACAACCGGA 61.123 55.000 9.46 0.00 0.00 5.14
2205 2286 1.375523 CAGGGCAGTACAACCGGAC 60.376 63.158 9.46 0.00 0.00 4.79
2206 2287 2.046604 GGGCAGTACAACCGGACC 60.047 66.667 9.46 0.00 0.00 4.46
2207 2288 2.745037 GGCAGTACAACCGGACCA 59.255 61.111 9.46 0.00 0.00 4.02
2208 2289 1.670083 GGCAGTACAACCGGACCAC 60.670 63.158 9.46 0.00 0.00 4.16
2209 2290 1.070105 GCAGTACAACCGGACCACA 59.930 57.895 9.46 0.00 0.00 4.17
2210 2291 1.226030 GCAGTACAACCGGACCACAC 61.226 60.000 9.46 0.00 0.00 3.82
2211 2292 0.105224 CAGTACAACCGGACCACACA 59.895 55.000 9.46 0.00 0.00 3.72
2212 2293 0.105408 AGTACAACCGGACCACACAC 59.895 55.000 9.46 0.00 0.00 3.82
2213 2294 0.881600 GTACAACCGGACCACACACC 60.882 60.000 9.46 0.00 0.00 4.16
2218 2299 4.244463 CGGACCACACACCGGGTT 62.244 66.667 6.32 0.00 44.59 4.11
2219 2300 2.281276 GGACCACACACCGGGTTC 60.281 66.667 6.32 0.00 37.57 3.62
2220 2301 2.814835 GGACCACACACCGGGTTCT 61.815 63.158 6.32 0.00 37.57 3.01
2221 2302 1.301479 GACCACACACCGGGTTCTC 60.301 63.158 6.32 0.00 37.57 2.87
2222 2303 2.035237 GACCACACACCGGGTTCTCA 62.035 60.000 6.32 0.00 37.57 3.27
2223 2304 1.147376 CCACACACCGGGTTCTCAA 59.853 57.895 6.32 0.00 0.00 3.02
2224 2305 1.164041 CCACACACCGGGTTCTCAAC 61.164 60.000 6.32 0.00 0.00 3.18
2225 2306 0.179056 CACACACCGGGTTCTCAACT 60.179 55.000 6.32 0.00 0.00 3.16
2226 2307 0.179056 ACACACCGGGTTCTCAACTG 60.179 55.000 6.32 0.00 0.00 3.16
2227 2308 0.179056 CACACCGGGTTCTCAACTGT 60.179 55.000 6.32 0.00 0.00 3.55
2228 2309 0.106149 ACACCGGGTTCTCAACTGTC 59.894 55.000 6.32 0.00 0.00 3.51
2229 2310 0.393077 CACCGGGTTCTCAACTGTCT 59.607 55.000 6.32 0.00 0.00 3.41
2230 2311 0.393077 ACCGGGTTCTCAACTGTCTG 59.607 55.000 6.32 0.00 0.00 3.51
2231 2312 0.679505 CCGGGTTCTCAACTGTCTGA 59.320 55.000 0.00 0.00 0.00 3.27
2232 2313 1.276421 CCGGGTTCTCAACTGTCTGAT 59.724 52.381 0.00 0.00 0.00 2.90
2233 2314 2.341257 CGGGTTCTCAACTGTCTGATG 58.659 52.381 0.00 0.00 0.00 3.07
2234 2315 2.029020 CGGGTTCTCAACTGTCTGATGA 60.029 50.000 0.00 0.00 0.00 2.92
2235 2316 3.368843 CGGGTTCTCAACTGTCTGATGAT 60.369 47.826 0.00 0.00 0.00 2.45
2236 2317 4.583871 GGGTTCTCAACTGTCTGATGATT 58.416 43.478 0.00 0.00 0.00 2.57
2237 2318 5.624509 CGGGTTCTCAACTGTCTGATGATTA 60.625 44.000 0.00 0.00 0.00 1.75
2238 2319 6.352516 GGGTTCTCAACTGTCTGATGATTAT 58.647 40.000 0.00 0.00 0.00 1.28
2239 2320 6.825721 GGGTTCTCAACTGTCTGATGATTATT 59.174 38.462 0.00 0.00 0.00 1.40
2240 2321 7.987458 GGGTTCTCAACTGTCTGATGATTATTA 59.013 37.037 0.00 0.00 0.00 0.98
2241 2322 9.553064 GGTTCTCAACTGTCTGATGATTATTAT 57.447 33.333 0.00 0.00 0.00 1.28
2271 2352 9.830186 ATACTCCTATATATCCCGCTAATTGAT 57.170 33.333 0.00 0.00 0.00 2.57
2273 2354 9.303116 ACTCCTATATATCCCGCTAATTGATAG 57.697 37.037 0.00 0.00 34.52 2.08
2274 2355 9.303116 CTCCTATATATCCCGCTAATTGATAGT 57.697 37.037 0.00 0.00 33.87 2.12
2275 2356 9.298250 TCCTATATATCCCGCTAATTGATAGTC 57.702 37.037 0.00 0.00 33.87 2.59
2276 2357 8.524487 CCTATATATCCCGCTAATTGATAGTCC 58.476 40.741 0.00 0.00 33.87 3.85
2277 2358 9.303116 CTATATATCCCGCTAATTGATAGTCCT 57.697 37.037 0.00 0.00 33.87 3.85
2279 2360 5.662674 ATCCCGCTAATTGATAGTCCTAC 57.337 43.478 0.00 0.00 33.87 3.18
2280 2361 4.737578 TCCCGCTAATTGATAGTCCTACT 58.262 43.478 0.00 0.00 33.87 2.57
2281 2362 5.884322 TCCCGCTAATTGATAGTCCTACTA 58.116 41.667 0.00 0.00 34.82 1.82
2282 2363 5.709164 TCCCGCTAATTGATAGTCCTACTAC 59.291 44.000 0.00 0.00 32.84 2.73
2283 2364 5.711036 CCCGCTAATTGATAGTCCTACTACT 59.289 44.000 0.00 0.00 32.84 2.57
2284 2365 6.883217 CCCGCTAATTGATAGTCCTACTACTA 59.117 42.308 0.00 0.00 32.84 1.82
2285 2366 7.556996 CCCGCTAATTGATAGTCCTACTACTAT 59.443 40.741 0.00 0.00 43.72 2.12
2286 2367 8.958506 CCGCTAATTGATAGTCCTACTACTATT 58.041 37.037 0.00 0.00 41.65 1.73
2311 2392 9.944663 TTTTAGTTTTGCTTTATGACTGTACAG 57.055 29.630 21.44 21.44 0.00 2.74
2312 2393 6.560253 AGTTTTGCTTTATGACTGTACAGG 57.440 37.500 26.12 8.13 0.00 4.00
2313 2394 6.062095 AGTTTTGCTTTATGACTGTACAGGT 58.938 36.000 26.12 14.09 0.00 4.00
2314 2395 6.204882 AGTTTTGCTTTATGACTGTACAGGTC 59.795 38.462 26.12 19.60 0.00 3.85
2315 2396 4.202245 TGCTTTATGACTGTACAGGTCC 57.798 45.455 26.12 14.93 33.22 4.46
2316 2397 3.580895 TGCTTTATGACTGTACAGGTCCA 59.419 43.478 26.12 19.53 33.22 4.02
2317 2398 4.184629 GCTTTATGACTGTACAGGTCCAG 58.815 47.826 26.12 14.33 33.22 3.86
2318 2399 4.759782 CTTTATGACTGTACAGGTCCAGG 58.240 47.826 26.12 7.51 32.90 4.45
2319 2400 1.573108 ATGACTGTACAGGTCCAGGG 58.427 55.000 26.12 0.22 32.90 4.45
2320 2401 0.485543 TGACTGTACAGGTCCAGGGA 59.514 55.000 26.12 3.68 32.90 4.20
2321 2402 0.896226 GACTGTACAGGTCCAGGGAC 59.104 60.000 26.12 10.03 43.87 4.46
2329 2410 4.021925 GTCCAGGGACCTTGCGCT 62.022 66.667 9.73 0.00 39.08 5.92
2330 2411 4.020617 TCCAGGGACCTTGCGCTG 62.021 66.667 9.73 0.76 45.33 5.18
2333 2414 2.586792 AGGGACCTTGCGCTGATC 59.413 61.111 9.73 0.00 0.00 2.92
2334 2415 2.268920 GGGACCTTGCGCTGATCA 59.731 61.111 9.73 0.00 0.00 2.92
2335 2416 1.377202 GGGACCTTGCGCTGATCAA 60.377 57.895 9.73 0.00 0.00 2.57
2336 2417 0.960364 GGGACCTTGCGCTGATCAAA 60.960 55.000 9.73 0.00 0.00 2.69
2337 2418 0.449388 GGACCTTGCGCTGATCAAAG 59.551 55.000 9.73 1.95 0.00 2.77
2338 2419 0.179179 GACCTTGCGCTGATCAAAGC 60.179 55.000 9.73 13.38 39.94 3.51
2339 2420 0.890542 ACCTTGCGCTGATCAAAGCA 60.891 50.000 17.59 17.59 43.73 3.91
2340 2421 0.241749 CCTTGCGCTGATCAAAGCAA 59.758 50.000 26.01 26.01 45.79 3.91
2341 2422 3.778969 TTGCGCTGATCAAAGCAAG 57.221 47.368 24.79 3.64 43.55 4.01
2342 2423 0.953727 TTGCGCTGATCAAAGCAAGT 59.046 45.000 24.79 0.00 43.55 3.16
2343 2424 0.518636 TGCGCTGATCAAAGCAAGTC 59.481 50.000 18.78 1.86 43.73 3.01
2344 2425 0.518636 GCGCTGATCAAAGCAAGTCA 59.481 50.000 14.88 0.00 43.73 3.41
2345 2426 1.727213 GCGCTGATCAAAGCAAGTCAC 60.727 52.381 14.88 0.00 43.73 3.67
2346 2427 1.532437 CGCTGATCAAAGCAAGTCACA 59.468 47.619 7.61 0.00 43.73 3.58
2347 2428 2.161012 CGCTGATCAAAGCAAGTCACAT 59.839 45.455 7.61 0.00 43.73 3.21
2348 2429 3.371898 CGCTGATCAAAGCAAGTCACATA 59.628 43.478 7.61 0.00 43.73 2.29
2349 2430 4.656041 GCTGATCAAAGCAAGTCACATAC 58.344 43.478 0.00 0.00 43.01 2.39
2350 2431 4.154737 GCTGATCAAAGCAAGTCACATACA 59.845 41.667 0.00 0.00 43.01 2.29
2351 2432 5.335113 GCTGATCAAAGCAAGTCACATACAA 60.335 40.000 0.00 0.00 43.01 2.41
2352 2433 6.624423 GCTGATCAAAGCAAGTCACATACAAT 60.624 38.462 0.00 0.00 43.01 2.71
2353 2434 6.614160 TGATCAAAGCAAGTCACATACAATG 58.386 36.000 0.00 0.00 0.00 2.82
2354 2435 5.375417 TCAAAGCAAGTCACATACAATGG 57.625 39.130 0.00 0.00 33.60 3.16
2355 2436 5.069318 TCAAAGCAAGTCACATACAATGGA 58.931 37.500 0.00 0.00 33.60 3.41
2356 2437 5.534278 TCAAAGCAAGTCACATACAATGGAA 59.466 36.000 0.00 0.00 33.60 3.53
2357 2438 5.376854 AAGCAAGTCACATACAATGGAAC 57.623 39.130 0.00 0.00 33.60 3.62
2358 2439 4.655963 AGCAAGTCACATACAATGGAACT 58.344 39.130 0.00 0.00 32.67 3.01
2359 2440 4.456911 AGCAAGTCACATACAATGGAACTG 59.543 41.667 0.00 0.00 32.01 3.16
2360 2441 4.726416 CAAGTCACATACAATGGAACTGC 58.274 43.478 0.00 0.00 32.01 4.40
2361 2442 3.002791 AGTCACATACAATGGAACTGCG 58.997 45.455 0.00 0.00 30.94 5.18
2362 2443 3.000041 GTCACATACAATGGAACTGCGA 59.000 45.455 0.00 0.00 33.60 5.10
2363 2444 3.062639 GTCACATACAATGGAACTGCGAG 59.937 47.826 0.00 0.00 33.60 5.03
2364 2445 2.009774 ACATACAATGGAACTGCGAGC 58.990 47.619 0.00 0.00 33.60 5.03
2365 2446 2.283298 CATACAATGGAACTGCGAGCT 58.717 47.619 0.00 0.00 0.00 4.09
2366 2447 1.725641 TACAATGGAACTGCGAGCTG 58.274 50.000 0.00 0.37 0.00 4.24
2367 2448 1.136147 CAATGGAACTGCGAGCTGC 59.864 57.895 0.00 0.00 46.70 5.25
2368 2449 1.002868 AATGGAACTGCGAGCTGCT 60.003 52.632 0.00 0.00 46.63 4.24
2369 2450 1.303799 AATGGAACTGCGAGCTGCTG 61.304 55.000 7.01 1.88 46.63 4.41
2370 2451 3.123620 GGAACTGCGAGCTGCTGG 61.124 66.667 7.01 7.21 45.96 4.85
2371 2452 2.047844 GAACTGCGAGCTGCTGGA 60.048 61.111 16.17 4.63 45.96 3.86
2372 2453 2.358003 AACTGCGAGCTGCTGGAC 60.358 61.111 16.17 7.41 45.96 4.02
2373 2454 2.778309 GAACTGCGAGCTGCTGGACT 62.778 60.000 16.17 0.00 45.96 3.85
2374 2455 2.047465 CTGCGAGCTGCTGGACTT 60.047 61.111 16.17 0.00 46.63 3.01
2375 2456 2.357881 TGCGAGCTGCTGGACTTG 60.358 61.111 16.17 0.00 46.63 3.16
2376 2457 3.797546 GCGAGCTGCTGGACTTGC 61.798 66.667 16.17 0.00 41.73 4.01
2377 2458 3.123620 CGAGCTGCTGGACTTGCC 61.124 66.667 7.01 0.00 37.10 4.52
2378 2459 2.749441 GAGCTGCTGGACTTGCCC 60.749 66.667 7.01 0.00 34.97 5.36
2379 2460 3.255397 AGCTGCTGGACTTGCCCT 61.255 61.111 0.00 0.00 34.97 5.19
2380 2461 1.903877 GAGCTGCTGGACTTGCCCTA 61.904 60.000 7.01 0.00 34.97 3.53
2381 2462 1.451028 GCTGCTGGACTTGCCCTAG 60.451 63.158 0.00 0.00 34.97 3.02
2382 2463 1.222936 CTGCTGGACTTGCCCTAGG 59.777 63.158 0.06 0.06 34.97 3.02
2392 2473 4.018409 GCCCTAGGCCAACCAAAG 57.982 61.111 5.01 0.00 44.06 2.77
2393 2474 1.382629 GCCCTAGGCCAACCAAAGA 59.617 57.895 5.01 0.00 44.06 2.52
2394 2475 0.965866 GCCCTAGGCCAACCAAAGAC 60.966 60.000 5.01 0.00 44.06 3.01
2395 2476 0.698818 CCCTAGGCCAACCAAAGACT 59.301 55.000 5.01 0.00 39.06 3.24
2396 2477 1.913419 CCCTAGGCCAACCAAAGACTA 59.087 52.381 5.01 0.00 39.06 2.59
2397 2478 2.355818 CCCTAGGCCAACCAAAGACTAC 60.356 54.545 5.01 0.00 39.06 2.73
2398 2479 2.572104 CCTAGGCCAACCAAAGACTACT 59.428 50.000 5.01 0.00 39.06 2.57
2399 2480 3.009143 CCTAGGCCAACCAAAGACTACTT 59.991 47.826 5.01 0.00 39.06 2.24
2400 2481 2.863809 AGGCCAACCAAAGACTACTTG 58.136 47.619 5.01 0.00 39.06 3.16
2401 2482 2.174854 AGGCCAACCAAAGACTACTTGT 59.825 45.455 5.01 0.00 39.06 3.16
2402 2483 3.393278 AGGCCAACCAAAGACTACTTGTA 59.607 43.478 5.01 0.00 39.06 2.41
2403 2484 3.751698 GGCCAACCAAAGACTACTTGTAG 59.248 47.826 0.00 6.28 36.39 2.74
2404 2485 3.751698 GCCAACCAAAGACTACTTGTAGG 59.248 47.826 11.82 0.00 36.39 3.18
2405 2486 4.324267 CCAACCAAAGACTACTTGTAGGG 58.676 47.826 11.82 5.82 36.39 3.53
2406 2487 4.202430 CCAACCAAAGACTACTTGTAGGGT 60.202 45.833 11.82 6.36 36.39 4.34
2407 2488 5.012354 CCAACCAAAGACTACTTGTAGGGTA 59.988 44.000 11.82 0.00 36.39 3.69
2408 2489 5.997384 ACCAAAGACTACTTGTAGGGTAG 57.003 43.478 11.82 0.00 41.49 3.18
2410 2491 6.555711 ACCAAAGACTACTTGTAGGGTAGTA 58.444 40.000 11.82 0.00 46.47 1.82
2411 2492 6.435591 ACCAAAGACTACTTGTAGGGTAGTAC 59.564 42.308 11.82 0.00 46.47 2.73
2412 2493 6.662663 CCAAAGACTACTTGTAGGGTAGTACT 59.337 42.308 11.82 0.00 46.47 2.73
2413 2494 7.148103 CCAAAGACTACTTGTAGGGTAGTACTC 60.148 44.444 0.00 0.00 46.47 2.59
2414 2495 6.000246 AGACTACTTGTAGGGTAGTACTCC 58.000 45.833 0.00 0.27 46.47 3.85
2415 2496 5.730697 AGACTACTTGTAGGGTAGTACTCCT 59.269 44.000 0.00 3.12 46.47 3.69
2416 2497 6.217280 AGACTACTTGTAGGGTAGTACTCCTT 59.783 42.308 8.34 5.10 46.47 3.36
2417 2498 6.186234 ACTACTTGTAGGGTAGTACTCCTTG 58.814 44.000 8.34 1.32 45.22 3.61
2418 2499 4.351127 ACTTGTAGGGTAGTACTCCTTGG 58.649 47.826 8.34 1.05 34.75 3.61
2419 2500 4.045079 ACTTGTAGGGTAGTACTCCTTGGA 59.955 45.833 8.34 0.00 34.75 3.53
2420 2501 4.894252 TGTAGGGTAGTACTCCTTGGAT 57.106 45.455 8.34 0.00 34.75 3.41
2421 2502 4.543689 TGTAGGGTAGTACTCCTTGGATG 58.456 47.826 8.34 0.00 34.75 3.51
2422 2503 3.778622 AGGGTAGTACTCCTTGGATGT 57.221 47.619 0.00 0.00 0.00 3.06
2423 2504 3.375699 AGGGTAGTACTCCTTGGATGTG 58.624 50.000 0.00 0.00 0.00 3.21
2424 2505 2.434702 GGGTAGTACTCCTTGGATGTGG 59.565 54.545 0.00 0.00 0.00 4.17
2425 2506 2.434702 GGTAGTACTCCTTGGATGTGGG 59.565 54.545 0.00 0.00 0.00 4.61
2426 2507 1.584724 AGTACTCCTTGGATGTGGGG 58.415 55.000 0.00 0.00 0.00 4.96
2427 2508 1.080498 AGTACTCCTTGGATGTGGGGA 59.920 52.381 0.00 0.00 0.00 4.81
2428 2509 1.913419 GTACTCCTTGGATGTGGGGAA 59.087 52.381 0.00 0.00 0.00 3.97
2429 2510 0.995024 ACTCCTTGGATGTGGGGAAG 59.005 55.000 0.00 0.00 0.00 3.46
2430 2511 0.257039 CTCCTTGGATGTGGGGAAGG 59.743 60.000 0.00 0.00 36.99 3.46
2431 2512 1.380380 CCTTGGATGTGGGGAAGGC 60.380 63.158 0.00 0.00 0.00 4.35
2432 2513 1.383799 CTTGGATGTGGGGAAGGCA 59.616 57.895 0.00 0.00 0.00 4.75
2433 2514 0.251742 CTTGGATGTGGGGAAGGCAA 60.252 55.000 0.00 0.00 0.00 4.52
2434 2515 0.189574 TTGGATGTGGGGAAGGCAAA 59.810 50.000 0.00 0.00 0.00 3.68
2435 2516 0.413037 TGGATGTGGGGAAGGCAAAT 59.587 50.000 0.00 0.00 0.00 2.32
2436 2517 1.643286 TGGATGTGGGGAAGGCAAATA 59.357 47.619 0.00 0.00 0.00 1.40
2437 2518 2.043664 TGGATGTGGGGAAGGCAAATAA 59.956 45.455 0.00 0.00 0.00 1.40
2438 2519 3.103742 GGATGTGGGGAAGGCAAATAAA 58.896 45.455 0.00 0.00 0.00 1.40
2439 2520 3.517500 GGATGTGGGGAAGGCAAATAAAA 59.482 43.478 0.00 0.00 0.00 1.52
2440 2521 4.019771 GGATGTGGGGAAGGCAAATAAAAA 60.020 41.667 0.00 0.00 0.00 1.94
2441 2522 4.344359 TGTGGGGAAGGCAAATAAAAAC 57.656 40.909 0.00 0.00 0.00 2.43
2442 2523 3.711704 TGTGGGGAAGGCAAATAAAAACA 59.288 39.130 0.00 0.00 0.00 2.83
2443 2524 4.349342 TGTGGGGAAGGCAAATAAAAACAT 59.651 37.500 0.00 0.00 0.00 2.71
2444 2525 4.935205 GTGGGGAAGGCAAATAAAAACATC 59.065 41.667 0.00 0.00 0.00 3.06
2452 2533 7.961326 AGGCAAATAAAAACATCTAGGATGT 57.039 32.000 7.27 7.27 0.00 3.06
2453 2534 7.775120 AGGCAAATAAAAACATCTAGGATGTG 58.225 34.615 12.95 1.34 31.80 3.21
2462 2543 6.620877 AACATCTAGGATGTGTTTGGTAGA 57.379 37.500 12.95 0.00 32.53 2.59
2463 2544 6.814954 ACATCTAGGATGTGTTTGGTAGAT 57.185 37.500 11.68 0.00 0.00 1.98
2478 2559 3.780294 TGGTAGATTGCATTAGGTCCAGT 59.220 43.478 0.00 0.00 0.00 4.00
2483 2564 1.656587 TGCATTAGGTCCAGTCAGGT 58.343 50.000 0.00 0.00 39.02 4.00
2487 2568 1.267121 TTAGGTCCAGTCAGGTCTGC 58.733 55.000 0.00 0.00 39.02 4.26
2490 2571 2.917227 TCCAGTCAGGTCTGCGCA 60.917 61.111 10.98 10.98 39.02 6.09
2491 2572 2.267006 CCAGTCAGGTCTGCGCAT 59.733 61.111 12.24 0.00 34.47 4.73
2493 2574 1.079612 CAGTCAGGTCTGCGCATGA 60.080 57.895 12.24 9.32 0.00 3.07
2496 2577 0.390340 GTCAGGTCTGCGCATGAAGA 60.390 55.000 12.24 0.46 0.00 2.87
2497 2578 0.321346 TCAGGTCTGCGCATGAAGAA 59.679 50.000 12.24 0.00 29.09 2.52
2516 2597 1.066471 ATTTGGCCCATTTGGTTGCT 58.934 45.000 0.00 0.00 36.04 3.91
2529 2610 0.170561 GGTTGCTTGAGCTGCATCTG 59.829 55.000 1.02 0.00 40.34 2.90
2531 2612 1.743958 GTTGCTTGAGCTGCATCTGAT 59.256 47.619 1.02 0.00 40.34 2.90
2532 2613 2.124277 TGCTTGAGCTGCATCTGATT 57.876 45.000 1.02 0.00 42.66 2.57
2533 2614 2.443416 TGCTTGAGCTGCATCTGATTT 58.557 42.857 1.02 0.00 42.66 2.17
2540 2621 1.066716 GCTGCATCTGATTTTTGGCCA 60.067 47.619 0.00 0.00 0.00 5.36
2542 2623 2.232941 CTGCATCTGATTTTTGGCCAGT 59.767 45.455 5.11 0.00 0.00 4.00
2548 2629 4.331968 TCTGATTTTTGGCCAGTACGAAT 58.668 39.130 5.11 3.20 0.00 3.34
2551 2632 4.155826 TGATTTTTGGCCAGTACGAATCTG 59.844 41.667 5.11 0.00 0.00 2.90
2575 2656 2.365635 GGTCTGGGCCTGGCTCTA 60.366 66.667 21.13 4.98 0.00 2.43
2582 2663 0.983378 GGGCCTGGCTCTAGAGGAAA 60.983 60.000 21.23 0.00 0.00 3.13
2592 2673 3.430929 GCTCTAGAGGAAAAGCCGAATCA 60.431 47.826 21.23 0.00 43.43 2.57
2596 2678 1.026718 AGGAAAAGCCGAATCAGCCG 61.027 55.000 0.00 0.00 43.43 5.52
2602 2684 0.521735 AGCCGAATCAGCCGTTTTTC 59.478 50.000 0.00 0.00 0.00 2.29
2603 2685 0.793104 GCCGAATCAGCCGTTTTTCG 60.793 55.000 0.00 0.00 40.34 3.46
2675 2771 1.100510 CGACGTCTCATAACTCCCCA 58.899 55.000 14.70 0.00 0.00 4.96
2689 2785 1.152368 CCCCATGCTCCTTCCCATC 59.848 63.158 0.00 0.00 0.00 3.51
2694 2790 0.625683 ATGCTCCTTCCCATCCACCT 60.626 55.000 0.00 0.00 0.00 4.00
2701 2797 0.914417 TTCCCATCCACCTCCCTCAC 60.914 60.000 0.00 0.00 0.00 3.51
2710 2806 1.293498 CCTCCCTCACCAGTTCACG 59.707 63.158 0.00 0.00 0.00 4.35
2712 2808 1.821061 CTCCCTCACCAGTTCACGCT 61.821 60.000 0.00 0.00 0.00 5.07
2714 2810 1.668294 CCTCACCAGTTCACGCTCT 59.332 57.895 0.00 0.00 0.00 4.09
2724 2820 0.329931 TTCACGCTCTCTCTCTCCCT 59.670 55.000 0.00 0.00 0.00 4.20
2728 2824 0.469917 CGCTCTCTCTCTCCCTCTCT 59.530 60.000 0.00 0.00 0.00 3.10
2730 2826 1.771255 GCTCTCTCTCTCCCTCTCTCT 59.229 57.143 0.00 0.00 0.00 3.10
2731 2827 2.224402 GCTCTCTCTCTCCCTCTCTCTC 60.224 59.091 0.00 0.00 0.00 3.20
2732 2828 3.312890 CTCTCTCTCTCCCTCTCTCTCT 58.687 54.545 0.00 0.00 0.00 3.10
2734 2830 3.051803 TCTCTCTCTCCCTCTCTCTCTCT 60.052 52.174 0.00 0.00 0.00 3.10
2740 2841 1.909986 TCCCTCTCTCTCTCTGTTCGA 59.090 52.381 0.00 0.00 0.00 3.71
2747 2848 5.496556 TCTCTCTCTCTGTTCGATTTCTCT 58.503 41.667 0.00 0.00 0.00 3.10
2772 2873 4.373116 GAGCCGCCGTCTCACCAA 62.373 66.667 0.00 0.00 0.00 3.67
2787 2889 4.366684 CAAGCCCCACCCACTCCC 62.367 72.222 0.00 0.00 0.00 4.30
2797 2899 3.083349 CCACTCCCCTCATCGCCA 61.083 66.667 0.00 0.00 0.00 5.69
2801 2903 3.008517 TCCCCTCATCGCCAGCAA 61.009 61.111 0.00 0.00 0.00 3.91
2803 2905 2.046023 CCCTCATCGCCAGCAACA 60.046 61.111 0.00 0.00 0.00 3.33
2808 2910 0.810648 TCATCGCCAGCAACAAATCC 59.189 50.000 0.00 0.00 0.00 3.01
2815 2917 1.901159 CCAGCAACAAATCCCATCCAA 59.099 47.619 0.00 0.00 0.00 3.53
2816 2918 2.302445 CCAGCAACAAATCCCATCCAAA 59.698 45.455 0.00 0.00 0.00 3.28
2832 2934 0.109132 CAAAAGAGGTGGATTGCCGC 60.109 55.000 0.00 0.00 44.14 6.53
2857 2960 2.835431 CCTCCGCACGGGATCTCT 60.835 66.667 9.58 0.00 46.04 3.10
2860 2963 3.209812 CCGCACGGGATCTCTCGA 61.210 66.667 6.45 0.00 38.47 4.04
2881 2984 4.096003 CAATCCGTGCCCCGTCCT 62.096 66.667 0.00 0.00 33.66 3.85
2883 2986 4.779733 ATCCGTGCCCCGTCCTCT 62.780 66.667 0.00 0.00 33.66 3.69
2891 2994 1.374947 CCCCGTCCTCTTTCTGCAA 59.625 57.895 0.00 0.00 0.00 4.08
2897 3000 2.157738 GTCCTCTTTCTGCAACATGCT 58.842 47.619 3.78 0.00 45.31 3.79
2900 3003 1.540267 CTCTTTCTGCAACATGCTGCT 59.460 47.619 20.95 0.00 45.31 4.24
2904 3007 3.642778 CTGCAACATGCTGCTGCCC 62.643 63.158 20.95 0.00 45.31 5.36
2906 3009 3.766691 CAACATGCTGCTGCCCCC 61.767 66.667 13.47 0.00 38.71 5.40
2949 3052 2.280404 TATCTCCGACTCCGCCACCT 62.280 60.000 0.00 0.00 0.00 4.00
2951 3054 4.988716 TCCGACTCCGCCACCTGT 62.989 66.667 0.00 0.00 0.00 4.00
2983 3086 0.179234 TCGTCTTGGGCTCAACAACA 59.821 50.000 0.00 0.00 0.00 3.33
2988 3091 0.394488 TTGGGCTCAACAACAACGGA 60.394 50.000 0.00 0.00 0.00 4.69
2989 3092 0.817634 TGGGCTCAACAACAACGGAG 60.818 55.000 0.00 0.00 0.00 4.63
2997 3101 5.356882 TCAACAACAACGGAGATTCAATC 57.643 39.130 0.00 0.00 0.00 2.67
3005 3109 2.203209 AGATTCAATCCCCGCCGC 60.203 61.111 0.00 0.00 0.00 6.53
3016 3120 2.815647 CCGCCGCCTCTGTTCTTC 60.816 66.667 0.00 0.00 0.00 2.87
3026 3130 3.234630 CTGTTCTTCGCCGACCCCA 62.235 63.158 0.00 0.00 0.00 4.96
3047 3172 2.907042 ACTCATTCGAGGGTTTTCTCCT 59.093 45.455 0.00 0.00 44.17 3.69
3054 3179 0.765510 AGGGTTTTCTCCTCTGCGTT 59.234 50.000 0.00 0.00 0.00 4.84
3088 3213 4.863925 GAGCTCGAGGACGCCAGC 62.864 72.222 15.58 0.00 38.87 4.85
3098 3223 1.519719 GACGCCAGCCTCATCTTCT 59.480 57.895 0.00 0.00 0.00 2.85
3107 3232 1.736586 CTCATCTTCTAGCCGGCGT 59.263 57.895 23.20 12.38 0.00 5.68
3132 3257 2.737376 GGAACACGACTGCGACCC 60.737 66.667 0.00 0.00 41.64 4.46
3136 3261 4.039357 CACGACTGCGACCCTCGT 62.039 66.667 0.00 0.00 42.81 4.18
3161 3286 0.320421 CCGGTTCTTCTTCTTCGGCA 60.320 55.000 0.00 0.00 0.00 5.69
3164 3289 1.512926 GTTCTTCTTCTTCGGCAGCA 58.487 50.000 0.00 0.00 0.00 4.41
3167 3292 0.952497 CTTCTTCTTCGGCAGCAGCA 60.952 55.000 2.65 0.00 44.61 4.41
3168 3293 1.230635 TTCTTCTTCGGCAGCAGCAC 61.231 55.000 2.65 0.00 44.61 4.40
3222 3348 2.125310 CATACGCTCCACCGGCAA 60.125 61.111 0.00 0.00 0.00 4.52
3256 3384 1.419387 CTCCTTATCTCCCCCTTGCTG 59.581 57.143 0.00 0.00 0.00 4.41
3257 3385 1.009552 TCCTTATCTCCCCCTTGCTGA 59.990 52.381 0.00 0.00 0.00 4.26
3258 3386 2.061061 CCTTATCTCCCCCTTGCTGAT 58.939 52.381 0.00 0.00 0.00 2.90
3259 3387 2.224719 CCTTATCTCCCCCTTGCTGATG 60.225 54.545 0.00 0.00 0.00 3.07
3260 3388 2.494888 TATCTCCCCCTTGCTGATGA 57.505 50.000 0.00 0.00 0.00 2.92
3261 3389 1.138568 ATCTCCCCCTTGCTGATGAG 58.861 55.000 0.00 0.00 0.00 2.90
3262 3390 0.252881 TCTCCCCCTTGCTGATGAGT 60.253 55.000 0.00 0.00 0.00 3.41
3263 3391 0.622665 CTCCCCCTTGCTGATGAGTT 59.377 55.000 0.00 0.00 0.00 3.01
3264 3392 1.005215 CTCCCCCTTGCTGATGAGTTT 59.995 52.381 0.00 0.00 0.00 2.66
3265 3393 1.180029 CCCCCTTGCTGATGAGTTTG 58.820 55.000 0.00 0.00 0.00 2.93
3266 3394 1.548582 CCCCCTTGCTGATGAGTTTGT 60.549 52.381 0.00 0.00 0.00 2.83
3267 3395 2.290896 CCCCCTTGCTGATGAGTTTGTA 60.291 50.000 0.00 0.00 0.00 2.41
3268 3396 2.749621 CCCCTTGCTGATGAGTTTGTAC 59.250 50.000 0.00 0.00 0.00 2.90
3269 3397 3.560025 CCCCTTGCTGATGAGTTTGTACT 60.560 47.826 0.00 0.00 37.31 2.73
3270 3398 4.323485 CCCCTTGCTGATGAGTTTGTACTA 60.323 45.833 0.00 0.00 33.84 1.82
3271 3399 5.431765 CCCTTGCTGATGAGTTTGTACTAT 58.568 41.667 0.00 0.00 33.84 2.12
3272 3400 5.525378 CCCTTGCTGATGAGTTTGTACTATC 59.475 44.000 0.00 0.00 33.84 2.08
3273 3401 5.525378 CCTTGCTGATGAGTTTGTACTATCC 59.475 44.000 0.00 0.00 33.84 2.59
3274 3402 5.939764 TGCTGATGAGTTTGTACTATCCT 57.060 39.130 0.00 0.00 33.84 3.24
3275 3403 6.299805 TGCTGATGAGTTTGTACTATCCTT 57.700 37.500 0.00 0.00 33.84 3.36
3276 3404 7.418337 TGCTGATGAGTTTGTACTATCCTTA 57.582 36.000 0.00 0.00 33.84 2.69
3277 3405 7.847096 TGCTGATGAGTTTGTACTATCCTTAA 58.153 34.615 0.00 0.00 33.84 1.85
3278 3406 8.318412 TGCTGATGAGTTTGTACTATCCTTAAA 58.682 33.333 0.00 0.00 33.84 1.52
3279 3407 9.331282 GCTGATGAGTTTGTACTATCCTTAAAT 57.669 33.333 0.00 0.00 33.84 1.40
3312 3440 7.521509 AAAAATAGTGATCGAGAGTTTACGG 57.478 36.000 0.00 0.00 0.00 4.02
3313 3441 6.446781 AAATAGTGATCGAGAGTTTACGGA 57.553 37.500 0.00 0.00 0.00 4.69
3314 3442 6.636562 AATAGTGATCGAGAGTTTACGGAT 57.363 37.500 0.00 0.00 0.00 4.18
3315 3443 4.555348 AGTGATCGAGAGTTTACGGATC 57.445 45.455 0.00 0.00 0.00 3.36
3316 3444 4.200874 AGTGATCGAGAGTTTACGGATCT 58.799 43.478 0.00 0.00 0.00 2.75
3317 3445 5.366460 AGTGATCGAGAGTTTACGGATCTA 58.634 41.667 0.00 0.00 0.00 1.98
3318 3446 5.467399 AGTGATCGAGAGTTTACGGATCTAG 59.533 44.000 0.00 0.00 0.00 2.43
3319 3447 4.213694 TGATCGAGAGTTTACGGATCTAGC 59.786 45.833 0.00 0.00 0.00 3.42
3320 3448 3.538591 TCGAGAGTTTACGGATCTAGCA 58.461 45.455 0.00 0.00 0.00 3.49
3321 3449 3.943381 TCGAGAGTTTACGGATCTAGCAA 59.057 43.478 0.00 0.00 0.00 3.91
3322 3450 4.397103 TCGAGAGTTTACGGATCTAGCAAA 59.603 41.667 0.00 0.00 0.00 3.68
3323 3451 5.100259 CGAGAGTTTACGGATCTAGCAAAA 58.900 41.667 0.00 0.00 0.00 2.44
3324 3452 5.749109 CGAGAGTTTACGGATCTAGCAAAAT 59.251 40.000 0.00 0.00 0.00 1.82
3325 3453 6.916387 CGAGAGTTTACGGATCTAGCAAAATA 59.084 38.462 0.00 0.00 0.00 1.40
3326 3454 7.434307 CGAGAGTTTACGGATCTAGCAAAATAA 59.566 37.037 0.00 0.00 0.00 1.40
3327 3455 8.421673 AGAGTTTACGGATCTAGCAAAATAAC 57.578 34.615 0.00 0.00 0.00 1.89
3328 3456 8.258708 AGAGTTTACGGATCTAGCAAAATAACT 58.741 33.333 0.00 0.00 0.00 2.24
3329 3457 8.788325 AGTTTACGGATCTAGCAAAATAACTT 57.212 30.769 0.00 0.00 0.00 2.66
3330 3458 8.665685 AGTTTACGGATCTAGCAAAATAACTTG 58.334 33.333 0.00 0.00 0.00 3.16
3331 3459 7.548196 TTACGGATCTAGCAAAATAACTTGG 57.452 36.000 0.00 0.00 0.00 3.61
3332 3460 4.335594 ACGGATCTAGCAAAATAACTTGGC 59.664 41.667 0.00 0.00 0.00 4.52
3333 3461 4.335315 CGGATCTAGCAAAATAACTTGGCA 59.665 41.667 0.00 0.00 0.00 4.92
3334 3462 5.009010 CGGATCTAGCAAAATAACTTGGCAT 59.991 40.000 0.00 0.00 0.00 4.40
3335 3463 6.460123 CGGATCTAGCAAAATAACTTGGCATT 60.460 38.462 0.00 0.00 0.00 3.56
3336 3464 6.698766 GGATCTAGCAAAATAACTTGGCATTG 59.301 38.462 0.00 0.00 0.00 2.82
3337 3465 6.588719 TCTAGCAAAATAACTTGGCATTGT 57.411 33.333 0.00 0.00 0.00 2.71
3338 3466 6.991938 TCTAGCAAAATAACTTGGCATTGTT 58.008 32.000 10.43 10.43 0.00 2.83
3339 3467 7.441017 TCTAGCAAAATAACTTGGCATTGTTT 58.559 30.769 10.78 1.53 0.00 2.83
3340 3468 6.544038 AGCAAAATAACTTGGCATTGTTTC 57.456 33.333 10.78 0.00 0.00 2.78
3341 3469 6.290605 AGCAAAATAACTTGGCATTGTTTCT 58.709 32.000 10.78 0.00 0.00 2.52
3342 3470 7.441017 AGCAAAATAACTTGGCATTGTTTCTA 58.559 30.769 10.78 0.00 0.00 2.10
3343 3471 7.599998 AGCAAAATAACTTGGCATTGTTTCTAG 59.400 33.333 10.78 0.00 0.00 2.43
3344 3472 7.598493 GCAAAATAACTTGGCATTGTTTCTAGA 59.402 33.333 10.78 0.00 0.00 2.43
3345 3473 9.132521 CAAAATAACTTGGCATTGTTTCTAGAG 57.867 33.333 10.78 0.00 0.00 2.43
3346 3474 8.409358 AAATAACTTGGCATTGTTTCTAGAGT 57.591 30.769 10.78 0.00 0.00 3.24
3347 3475 9.515226 AAATAACTTGGCATTGTTTCTAGAGTA 57.485 29.630 10.78 0.00 0.00 2.59
3348 3476 9.515226 AATAACTTGGCATTGTTTCTAGAGTAA 57.485 29.630 10.78 0.00 0.00 2.24
3349 3477 7.817418 AACTTGGCATTGTTTCTAGAGTAAA 57.183 32.000 0.00 0.00 0.00 2.01
3350 3478 7.817418 ACTTGGCATTGTTTCTAGAGTAAAA 57.183 32.000 0.00 0.00 0.00 1.52
3351 3479 8.409358 ACTTGGCATTGTTTCTAGAGTAAAAT 57.591 30.769 0.00 0.00 0.00 1.82
3352 3480 8.515414 ACTTGGCATTGTTTCTAGAGTAAAATC 58.485 33.333 0.00 0.00 0.00 2.17
3353 3481 7.391148 TGGCATTGTTTCTAGAGTAAAATCC 57.609 36.000 0.00 0.00 0.00 3.01
3354 3482 7.175104 TGGCATTGTTTCTAGAGTAAAATCCT 58.825 34.615 0.00 0.00 0.00 3.24
3355 3483 8.325787 TGGCATTGTTTCTAGAGTAAAATCCTA 58.674 33.333 0.00 0.00 0.00 2.94
3356 3484 9.343539 GGCATTGTTTCTAGAGTAAAATCCTAT 57.656 33.333 0.00 0.00 0.00 2.57
3368 3496 9.059023 AGAGTAAAATCCTATCAAGTTTAGGGT 57.941 33.333 1.56 0.00 37.42 4.34
3373 3501 9.816787 AAAATCCTATCAAGTTTAGGGTAACAA 57.183 29.630 1.56 0.00 37.42 2.83
3374 3502 9.816787 AAATCCTATCAAGTTTAGGGTAACAAA 57.183 29.630 1.56 0.00 37.42 2.83
3375 3503 8.803397 ATCCTATCAAGTTTAGGGTAACAAAC 57.197 34.615 1.56 0.00 37.42 2.93
3376 3504 7.747690 TCCTATCAAGTTTAGGGTAACAAACA 58.252 34.615 1.56 0.00 37.42 2.83
3377 3505 8.387813 TCCTATCAAGTTTAGGGTAACAAACAT 58.612 33.333 1.56 0.00 37.42 2.71
3378 3506 9.675464 CCTATCAAGTTTAGGGTAACAAACATA 57.325 33.333 0.00 0.00 37.16 2.29
3381 3509 9.975218 ATCAAGTTTAGGGTAACAAACATAGAT 57.025 29.630 0.00 0.00 37.16 1.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
136 137 3.752412 TTGCAATCAAGAGAAGCGATG 57.248 42.857 0.00 0.00 33.19 3.84
343 356 2.594303 CAAGACGTGCCTTGCCCA 60.594 61.111 0.00 0.00 37.35 5.36
450 463 2.627699 GTGTTTTCTCCTTGAATGCCCA 59.372 45.455 0.00 0.00 34.24 5.36
590 603 0.792640 CGAATGAACTGTGCTTCGCT 59.207 50.000 7.21 0.00 34.78 4.93
600 613 2.120232 GTCGCGATCATCGAATGAACT 58.880 47.619 14.06 0.00 43.74 3.01
739 755 1.873486 CGCTGTGGATGAAGTGTGTGA 60.873 52.381 0.00 0.00 0.00 3.58
756 774 0.613260 TGATGAAGTTACCAGCCGCT 59.387 50.000 0.00 0.00 0.00 5.52
849 873 2.238521 CCCACACTATTGCACACCTTT 58.761 47.619 0.00 0.00 0.00 3.11
1335 1373 2.289444 TGCCTTGTTGTCTAGCACTACC 60.289 50.000 0.00 0.00 30.29 3.18
1346 1384 1.315257 GCCATCGGATGCCTTGTTGT 61.315 55.000 12.54 0.00 0.00 3.32
1424 1474 3.064987 TAAGCTCTGAGGACGGCGC 62.065 63.158 6.90 0.00 33.82 6.53
1425 1475 1.226717 GTAAGCTCTGAGGACGGCG 60.227 63.158 4.80 4.80 0.00 6.46
1426 1476 1.226717 CGTAAGCTCTGAGGACGGC 60.227 63.158 6.83 0.00 0.00 5.68
2031 2108 0.461870 TCCGATTCACCATGAAGGCG 60.462 55.000 0.00 8.70 40.05 5.52
2070 2147 4.185394 TCGCAACGTATGTTAATGATGGT 58.815 39.130 0.00 0.00 36.28 3.55
2078 2155 3.429543 GTCCAACTTCGCAACGTATGTTA 59.570 43.478 0.00 0.00 36.28 2.41
2158 2239 2.566724 CTGAACTGCTCTTCTTCTCCCT 59.433 50.000 0.00 0.00 0.00 4.20
2171 2252 1.239968 CCTGAACTGCCCTGAACTGC 61.240 60.000 0.00 0.00 0.00 4.40
2172 2253 0.607489 CCCTGAACTGCCCTGAACTG 60.607 60.000 0.00 0.00 0.00 3.16
2173 2254 1.763770 CCCTGAACTGCCCTGAACT 59.236 57.895 0.00 0.00 0.00 3.01
2174 2255 1.973812 GCCCTGAACTGCCCTGAAC 60.974 63.158 0.00 0.00 0.00 3.18
2175 2256 2.416107 CTGCCCTGAACTGCCCTGAA 62.416 60.000 0.00 0.00 0.00 3.02
2176 2257 2.853542 TGCCCTGAACTGCCCTGA 60.854 61.111 0.00 0.00 0.00 3.86
2177 2258 1.841302 TACTGCCCTGAACTGCCCTG 61.841 60.000 0.00 0.00 0.00 4.45
2178 2259 1.538876 TACTGCCCTGAACTGCCCT 60.539 57.895 0.00 0.00 0.00 5.19
2179 2260 1.377333 GTACTGCCCTGAACTGCCC 60.377 63.158 0.00 0.00 0.00 5.36
2180 2261 0.250727 TTGTACTGCCCTGAACTGCC 60.251 55.000 0.00 0.00 0.00 4.85
2181 2262 0.875059 GTTGTACTGCCCTGAACTGC 59.125 55.000 0.00 0.00 0.00 4.40
2182 2263 1.523758 GGTTGTACTGCCCTGAACTG 58.476 55.000 0.00 0.00 0.00 3.16
2183 2264 0.034896 CGGTTGTACTGCCCTGAACT 59.965 55.000 0.00 0.00 0.00 3.01
2184 2265 0.953960 CCGGTTGTACTGCCCTGAAC 60.954 60.000 0.00 0.00 0.00 3.18
2185 2266 1.122632 TCCGGTTGTACTGCCCTGAA 61.123 55.000 0.00 0.00 0.00 3.02
2186 2267 1.534476 TCCGGTTGTACTGCCCTGA 60.534 57.895 0.00 0.00 0.00 3.86
2187 2268 1.375523 GTCCGGTTGTACTGCCCTG 60.376 63.158 0.00 0.00 0.00 4.45
2188 2269 2.590114 GGTCCGGTTGTACTGCCCT 61.590 63.158 0.00 0.00 0.00 5.19
2189 2270 2.046604 GGTCCGGTTGTACTGCCC 60.047 66.667 0.00 0.00 0.00 5.36
2190 2271 1.670083 GTGGTCCGGTTGTACTGCC 60.670 63.158 0.00 0.00 0.00 4.85
2191 2272 1.070105 TGTGGTCCGGTTGTACTGC 59.930 57.895 0.00 0.00 0.00 4.40
2192 2273 0.105224 TGTGTGGTCCGGTTGTACTG 59.895 55.000 0.00 0.00 0.00 2.74
2193 2274 0.105408 GTGTGTGGTCCGGTTGTACT 59.895 55.000 0.00 0.00 0.00 2.73
2194 2275 0.881600 GGTGTGTGGTCCGGTTGTAC 60.882 60.000 0.00 0.00 0.00 2.90
2195 2276 1.446791 GGTGTGTGGTCCGGTTGTA 59.553 57.895 0.00 0.00 0.00 2.41
2196 2277 2.191109 GGTGTGTGGTCCGGTTGT 59.809 61.111 0.00 0.00 0.00 3.32
2197 2278 2.970324 CGGTGTGTGGTCCGGTTG 60.970 66.667 0.00 0.00 42.61 3.77
2201 2282 4.244463 AACCCGGTGTGTGGTCCG 62.244 66.667 0.00 0.00 45.42 4.79
2202 2283 2.281276 GAACCCGGTGTGTGGTCC 60.281 66.667 0.00 0.00 32.40 4.46
2203 2284 1.301479 GAGAACCCGGTGTGTGGTC 60.301 63.158 0.00 0.00 32.40 4.02
2204 2285 1.628238 TTGAGAACCCGGTGTGTGGT 61.628 55.000 0.00 0.00 36.06 4.16
2205 2286 1.147376 TTGAGAACCCGGTGTGTGG 59.853 57.895 0.00 0.00 0.00 4.17
2206 2287 0.179056 AGTTGAGAACCCGGTGTGTG 60.179 55.000 0.00 0.00 0.00 3.82
2207 2288 0.179056 CAGTTGAGAACCCGGTGTGT 60.179 55.000 0.00 0.00 0.00 3.72
2208 2289 0.179056 ACAGTTGAGAACCCGGTGTG 60.179 55.000 0.00 0.00 0.00 3.82
2209 2290 0.106149 GACAGTTGAGAACCCGGTGT 59.894 55.000 0.00 0.00 0.00 4.16
2210 2291 0.393077 AGACAGTTGAGAACCCGGTG 59.607 55.000 0.00 0.00 0.00 4.94
2211 2292 0.393077 CAGACAGTTGAGAACCCGGT 59.607 55.000 0.00 0.00 0.00 5.28
2212 2293 0.679505 TCAGACAGTTGAGAACCCGG 59.320 55.000 0.00 0.00 0.00 5.73
2213 2294 2.029020 TCATCAGACAGTTGAGAACCCG 60.029 50.000 0.00 0.00 0.00 5.28
2214 2295 3.685139 TCATCAGACAGTTGAGAACCC 57.315 47.619 0.00 0.00 0.00 4.11
2215 2296 7.856145 AATAATCATCAGACAGTTGAGAACC 57.144 36.000 0.00 0.00 29.96 3.62
2245 2326 9.830186 ATCAATTAGCGGGATATATAGGAGTAT 57.170 33.333 0.00 0.00 0.00 2.12
2247 2328 9.303116 CTATCAATTAGCGGGATATATAGGAGT 57.697 37.037 0.00 0.00 0.00 3.85
2248 2329 9.303116 ACTATCAATTAGCGGGATATATAGGAG 57.697 37.037 0.00 0.00 0.00 3.69
2249 2330 9.298250 GACTATCAATTAGCGGGATATATAGGA 57.702 37.037 0.00 0.00 0.00 2.94
2250 2331 8.524487 GGACTATCAATTAGCGGGATATATAGG 58.476 40.741 0.00 0.00 0.00 2.57
2251 2332 9.303116 AGGACTATCAATTAGCGGGATATATAG 57.697 37.037 0.00 0.00 0.00 1.31
2253 2334 9.080097 GTAGGACTATCAATTAGCGGGATATAT 57.920 37.037 0.00 0.00 0.00 0.86
2254 2335 8.280084 AGTAGGACTATCAATTAGCGGGATATA 58.720 37.037 0.00 0.00 0.00 0.86
2255 2336 7.126733 AGTAGGACTATCAATTAGCGGGATAT 58.873 38.462 0.00 0.00 0.00 1.63
2256 2337 6.491383 AGTAGGACTATCAATTAGCGGGATA 58.509 40.000 0.00 0.00 0.00 2.59
2257 2338 5.334421 AGTAGGACTATCAATTAGCGGGAT 58.666 41.667 0.00 0.00 0.00 3.85
2258 2339 4.737578 AGTAGGACTATCAATTAGCGGGA 58.262 43.478 0.00 0.00 0.00 5.14
2259 2340 5.711036 AGTAGTAGGACTATCAATTAGCGGG 59.289 44.000 0.00 0.00 32.65 6.13
2260 2341 6.821031 AGTAGTAGGACTATCAATTAGCGG 57.179 41.667 0.00 0.00 32.65 5.52
2285 2366 9.944663 CTGTACAGTCATAAAGCAAAACTAAAA 57.055 29.630 15.06 0.00 0.00 1.52
2286 2367 8.564574 CCTGTACAGTCATAAAGCAAAACTAAA 58.435 33.333 21.18 0.00 0.00 1.85
2287 2368 7.717875 ACCTGTACAGTCATAAAGCAAAACTAA 59.282 33.333 21.18 0.00 0.00 2.24
2288 2369 7.221450 ACCTGTACAGTCATAAAGCAAAACTA 58.779 34.615 21.18 0.00 0.00 2.24
2289 2370 6.062095 ACCTGTACAGTCATAAAGCAAAACT 58.938 36.000 21.18 0.00 0.00 2.66
2290 2371 6.313744 ACCTGTACAGTCATAAAGCAAAAC 57.686 37.500 21.18 0.00 0.00 2.43
2291 2372 5.472137 GGACCTGTACAGTCATAAAGCAAAA 59.528 40.000 21.18 0.00 0.00 2.44
2292 2373 5.001232 GGACCTGTACAGTCATAAAGCAAA 58.999 41.667 21.18 0.00 0.00 3.68
2293 2374 4.041075 TGGACCTGTACAGTCATAAAGCAA 59.959 41.667 21.18 0.00 0.00 3.91
2294 2375 3.580895 TGGACCTGTACAGTCATAAAGCA 59.419 43.478 21.18 8.36 0.00 3.91
2295 2376 4.184629 CTGGACCTGTACAGTCATAAAGC 58.815 47.826 21.18 6.27 36.78 3.51
2296 2377 4.383118 CCCTGGACCTGTACAGTCATAAAG 60.383 50.000 21.18 10.43 39.93 1.85
2297 2378 3.517901 CCCTGGACCTGTACAGTCATAAA 59.482 47.826 21.18 1.67 39.93 1.40
2298 2379 3.104512 CCCTGGACCTGTACAGTCATAA 58.895 50.000 21.18 7.89 39.93 1.90
2299 2380 2.313643 TCCCTGGACCTGTACAGTCATA 59.686 50.000 21.18 10.41 39.93 2.15
2300 2381 1.078823 TCCCTGGACCTGTACAGTCAT 59.921 52.381 21.18 6.68 39.93 3.06
2301 2382 0.485543 TCCCTGGACCTGTACAGTCA 59.514 55.000 21.18 14.48 39.93 3.41
2302 2383 0.896226 GTCCCTGGACCTGTACAGTC 59.104 60.000 21.18 16.92 39.93 3.51
2303 2384 3.068562 GTCCCTGGACCTGTACAGT 57.931 57.895 21.18 9.64 39.93 3.55
2321 2402 0.241749 TTGCTTTGATCAGCGCAAGG 59.758 50.000 22.26 0.00 43.37 3.61
2322 2403 3.778969 TTGCTTTGATCAGCGCAAG 57.221 47.368 22.26 13.11 43.37 4.01
2323 2404 0.953727 ACTTGCTTTGATCAGCGCAA 59.046 45.000 23.65 23.65 43.37 4.85
2324 2405 0.518636 GACTTGCTTTGATCAGCGCA 59.481 50.000 11.47 14.66 43.37 6.09
2325 2406 0.518636 TGACTTGCTTTGATCAGCGC 59.481 50.000 0.00 0.00 43.37 5.92
2326 2407 1.532437 TGTGACTTGCTTTGATCAGCG 59.468 47.619 0.00 0.00 43.37 5.18
2327 2408 3.844577 ATGTGACTTGCTTTGATCAGC 57.155 42.857 0.00 0.00 40.55 4.26
2328 2409 5.868043 TGTATGTGACTTGCTTTGATCAG 57.132 39.130 0.00 0.00 0.00 2.90
2329 2410 6.349528 CCATTGTATGTGACTTGCTTTGATCA 60.350 38.462 0.00 0.00 0.00 2.92
2330 2411 6.032094 CCATTGTATGTGACTTGCTTTGATC 58.968 40.000 0.00 0.00 0.00 2.92
2331 2412 5.711506 TCCATTGTATGTGACTTGCTTTGAT 59.288 36.000 0.00 0.00 0.00 2.57
2332 2413 5.069318 TCCATTGTATGTGACTTGCTTTGA 58.931 37.500 0.00 0.00 0.00 2.69
2333 2414 5.375417 TCCATTGTATGTGACTTGCTTTG 57.625 39.130 0.00 0.00 0.00 2.77
2334 2415 5.536161 AGTTCCATTGTATGTGACTTGCTTT 59.464 36.000 0.00 0.00 0.00 3.51
2335 2416 5.048504 CAGTTCCATTGTATGTGACTTGCTT 60.049 40.000 0.00 0.00 0.00 3.91
2336 2417 4.456911 CAGTTCCATTGTATGTGACTTGCT 59.543 41.667 0.00 0.00 0.00 3.91
2337 2418 4.726416 CAGTTCCATTGTATGTGACTTGC 58.274 43.478 0.00 0.00 0.00 4.01
2338 2419 4.669965 CGCAGTTCCATTGTATGTGACTTG 60.670 45.833 0.00 0.00 0.00 3.16
2339 2420 3.436704 CGCAGTTCCATTGTATGTGACTT 59.563 43.478 0.00 0.00 0.00 3.01
2340 2421 3.002791 CGCAGTTCCATTGTATGTGACT 58.997 45.455 0.00 0.00 0.00 3.41
2341 2422 3.000041 TCGCAGTTCCATTGTATGTGAC 59.000 45.455 0.00 0.00 0.00 3.67
2342 2423 3.261580 CTCGCAGTTCCATTGTATGTGA 58.738 45.455 0.00 0.00 0.00 3.58
2343 2424 2.223112 GCTCGCAGTTCCATTGTATGTG 60.223 50.000 0.00 0.00 0.00 3.21
2344 2425 2.009774 GCTCGCAGTTCCATTGTATGT 58.990 47.619 0.00 0.00 0.00 2.29
2345 2426 2.031314 CAGCTCGCAGTTCCATTGTATG 59.969 50.000 0.00 0.00 0.00 2.39
2346 2427 2.283298 CAGCTCGCAGTTCCATTGTAT 58.717 47.619 0.00 0.00 0.00 2.29
2347 2428 1.725641 CAGCTCGCAGTTCCATTGTA 58.274 50.000 0.00 0.00 0.00 2.41
2348 2429 1.580845 GCAGCTCGCAGTTCCATTGT 61.581 55.000 3.64 0.00 41.79 2.71
2349 2430 1.136147 GCAGCTCGCAGTTCCATTG 59.864 57.895 3.64 0.00 41.79 2.82
2350 2431 1.002868 AGCAGCTCGCAGTTCCATT 60.003 52.632 10.16 0.00 46.13 3.16
2351 2432 1.744368 CAGCAGCTCGCAGTTCCAT 60.744 57.895 10.16 0.00 46.13 3.41
2352 2433 2.357881 CAGCAGCTCGCAGTTCCA 60.358 61.111 10.16 0.00 46.13 3.53
2353 2434 3.123620 CCAGCAGCTCGCAGTTCC 61.124 66.667 10.16 0.00 46.13 3.62
2354 2435 2.047844 TCCAGCAGCTCGCAGTTC 60.048 61.111 10.16 0.00 46.13 3.01
2355 2436 2.358003 GTCCAGCAGCTCGCAGTT 60.358 61.111 10.16 0.00 46.13 3.16
2356 2437 2.876945 AAGTCCAGCAGCTCGCAGT 61.877 57.895 10.16 0.00 46.13 4.40
2357 2438 2.047465 AAGTCCAGCAGCTCGCAG 60.047 61.111 10.16 2.94 46.13 5.18
2358 2439 2.357881 CAAGTCCAGCAGCTCGCA 60.358 61.111 10.16 0.00 46.13 5.10
2359 2440 3.797546 GCAAGTCCAGCAGCTCGC 61.798 66.667 0.00 0.47 42.91 5.03
2360 2441 3.123620 GGCAAGTCCAGCAGCTCG 61.124 66.667 0.00 0.00 34.01 5.03
2361 2442 1.903877 TAGGGCAAGTCCAGCAGCTC 61.904 60.000 0.00 0.00 36.21 4.09
2362 2443 1.908340 CTAGGGCAAGTCCAGCAGCT 61.908 60.000 0.00 0.00 36.21 4.24
2363 2444 1.451028 CTAGGGCAAGTCCAGCAGC 60.451 63.158 0.00 0.00 36.21 5.25
2364 2445 1.222936 CCTAGGGCAAGTCCAGCAG 59.777 63.158 0.00 0.00 36.21 4.24
2365 2446 3.403624 CCTAGGGCAAGTCCAGCA 58.596 61.111 0.00 0.00 36.21 4.41
2376 2457 0.698818 AGTCTTTGGTTGGCCTAGGG 59.301 55.000 11.72 0.00 35.27 3.53
2377 2458 2.572104 AGTAGTCTTTGGTTGGCCTAGG 59.428 50.000 3.67 3.67 35.27 3.02
2378 2459 3.983044 AGTAGTCTTTGGTTGGCCTAG 57.017 47.619 3.32 0.00 35.27 3.02
2379 2460 3.393278 ACAAGTAGTCTTTGGTTGGCCTA 59.607 43.478 3.32 0.00 35.27 3.93
2380 2461 2.174854 ACAAGTAGTCTTTGGTTGGCCT 59.825 45.455 3.32 0.00 35.27 5.19
2381 2462 2.583143 ACAAGTAGTCTTTGGTTGGCC 58.417 47.619 0.00 0.00 0.00 5.36
2382 2463 3.751698 CCTACAAGTAGTCTTTGGTTGGC 59.248 47.826 6.50 0.00 0.00 4.52
2383 2464 4.202430 ACCCTACAAGTAGTCTTTGGTTGG 60.202 45.833 6.50 0.47 0.00 3.77
2384 2465 4.969484 ACCCTACAAGTAGTCTTTGGTTG 58.031 43.478 6.50 0.00 0.00 3.77
2385 2466 5.842874 ACTACCCTACAAGTAGTCTTTGGTT 59.157 40.000 9.40 0.00 45.70 3.67
2386 2467 5.400870 ACTACCCTACAAGTAGTCTTTGGT 58.599 41.667 6.50 8.02 45.70 3.67
2387 2468 5.997384 ACTACCCTACAAGTAGTCTTTGG 57.003 43.478 6.50 2.95 45.70 3.28
2388 2469 7.148103 GGAGTACTACCCTACAAGTAGTCTTTG 60.148 44.444 6.84 0.00 45.70 2.77
2389 2470 6.889177 GGAGTACTACCCTACAAGTAGTCTTT 59.111 42.308 6.84 0.00 45.70 2.52
2390 2471 6.217280 AGGAGTACTACCCTACAAGTAGTCTT 59.783 42.308 0.00 6.69 45.70 3.01
2391 2472 5.730697 AGGAGTACTACCCTACAAGTAGTCT 59.269 44.000 0.00 5.19 45.70 3.24
2392 2473 6.000246 AGGAGTACTACCCTACAAGTAGTC 58.000 45.833 0.00 8.25 45.70 2.59
2394 2475 5.593502 CCAAGGAGTACTACCCTACAAGTAG 59.406 48.000 0.00 0.21 42.42 2.57
2395 2476 5.253798 TCCAAGGAGTACTACCCTACAAGTA 59.746 44.000 0.00 0.00 31.36 2.24
2396 2477 4.045079 TCCAAGGAGTACTACCCTACAAGT 59.955 45.833 0.00 0.00 31.36 3.16
2397 2478 4.607239 TCCAAGGAGTACTACCCTACAAG 58.393 47.826 0.00 0.00 31.36 3.16
2398 2479 4.680278 TCCAAGGAGTACTACCCTACAA 57.320 45.455 0.00 0.00 31.36 2.41
2399 2480 4.016851 ACATCCAAGGAGTACTACCCTACA 60.017 45.833 0.00 0.00 31.36 2.74
2400 2481 4.341520 CACATCCAAGGAGTACTACCCTAC 59.658 50.000 0.00 0.00 31.36 3.18
2401 2482 4.543689 CACATCCAAGGAGTACTACCCTA 58.456 47.826 0.00 0.00 31.36 3.53
2402 2483 3.375699 CACATCCAAGGAGTACTACCCT 58.624 50.000 0.00 0.00 0.00 4.34
2403 2484 2.434702 CCACATCCAAGGAGTACTACCC 59.565 54.545 0.00 0.00 0.00 3.69
2404 2485 2.434702 CCCACATCCAAGGAGTACTACC 59.565 54.545 0.00 2.33 0.00 3.18
2405 2486 2.434702 CCCCACATCCAAGGAGTACTAC 59.565 54.545 0.00 0.00 0.00 2.73
2406 2487 2.316677 TCCCCACATCCAAGGAGTACTA 59.683 50.000 0.00 0.00 0.00 1.82
2407 2488 1.080498 TCCCCACATCCAAGGAGTACT 59.920 52.381 0.00 0.00 0.00 2.73
2408 2489 1.580059 TCCCCACATCCAAGGAGTAC 58.420 55.000 0.00 0.00 0.00 2.73
2409 2490 2.196595 CTTCCCCACATCCAAGGAGTA 58.803 52.381 0.00 0.00 0.00 2.59
2410 2491 0.995024 CTTCCCCACATCCAAGGAGT 59.005 55.000 0.00 0.00 0.00 3.85
2411 2492 0.257039 CCTTCCCCACATCCAAGGAG 59.743 60.000 0.00 0.00 38.15 3.69
2412 2493 1.863155 GCCTTCCCCACATCCAAGGA 61.863 60.000 0.59 0.00 38.15 3.36
2413 2494 1.380380 GCCTTCCCCACATCCAAGG 60.380 63.158 0.00 0.00 38.82 3.61
2414 2495 0.251742 TTGCCTTCCCCACATCCAAG 60.252 55.000 0.00 0.00 0.00 3.61
2415 2496 0.189574 TTTGCCTTCCCCACATCCAA 59.810 50.000 0.00 0.00 0.00 3.53
2416 2497 0.413037 ATTTGCCTTCCCCACATCCA 59.587 50.000 0.00 0.00 0.00 3.41
2417 2498 2.452600 TATTTGCCTTCCCCACATCC 57.547 50.000 0.00 0.00 0.00 3.51
2418 2499 4.817318 TTTTATTTGCCTTCCCCACATC 57.183 40.909 0.00 0.00 0.00 3.06
2419 2500 4.349342 TGTTTTTATTTGCCTTCCCCACAT 59.651 37.500 0.00 0.00 0.00 3.21
2420 2501 3.711704 TGTTTTTATTTGCCTTCCCCACA 59.288 39.130 0.00 0.00 0.00 4.17
2421 2502 4.344359 TGTTTTTATTTGCCTTCCCCAC 57.656 40.909 0.00 0.00 0.00 4.61
2422 2503 4.843516 AGATGTTTTTATTTGCCTTCCCCA 59.156 37.500 0.00 0.00 0.00 4.96
2423 2504 5.420725 AGATGTTTTTATTTGCCTTCCCC 57.579 39.130 0.00 0.00 0.00 4.81
2424 2505 6.379988 TCCTAGATGTTTTTATTTGCCTTCCC 59.620 38.462 0.00 0.00 0.00 3.97
2425 2506 7.404671 TCCTAGATGTTTTTATTTGCCTTCC 57.595 36.000 0.00 0.00 0.00 3.46
2426 2507 8.470002 ACATCCTAGATGTTTTTATTTGCCTTC 58.530 33.333 4.40 0.00 0.00 3.46
2427 2508 8.253113 CACATCCTAGATGTTTTTATTTGCCTT 58.747 33.333 7.48 0.00 0.00 4.35
2428 2509 7.397192 ACACATCCTAGATGTTTTTATTTGCCT 59.603 33.333 7.48 0.00 0.00 4.75
2429 2510 7.547227 ACACATCCTAGATGTTTTTATTTGCC 58.453 34.615 7.48 0.00 0.00 4.52
2430 2511 8.986477 AACACATCCTAGATGTTTTTATTTGC 57.014 30.769 7.48 0.00 32.70 3.68
2432 2513 9.927668 CCAAACACATCCTAGATGTTTTTATTT 57.072 29.630 17.02 7.65 42.43 1.40
2433 2514 9.088987 ACCAAACACATCCTAGATGTTTTTATT 57.911 29.630 17.02 8.07 42.43 1.40
2434 2515 8.650143 ACCAAACACATCCTAGATGTTTTTAT 57.350 30.769 17.02 9.20 42.43 1.40
2435 2516 9.226606 CTACCAAACACATCCTAGATGTTTTTA 57.773 33.333 17.02 6.07 42.43 1.52
2436 2517 6.976934 ACCAAACACATCCTAGATGTTTTT 57.023 33.333 13.42 13.42 42.43 1.94
2437 2518 7.458397 TCTACCAAACACATCCTAGATGTTTT 58.542 34.615 7.48 5.50 42.43 2.43
2438 2519 7.016153 TCTACCAAACACATCCTAGATGTTT 57.984 36.000 7.48 0.00 45.13 2.83
2439 2520 6.620877 TCTACCAAACACATCCTAGATGTT 57.379 37.500 7.48 0.00 38.18 2.71
2440 2521 6.814954 ATCTACCAAACACATCCTAGATGT 57.185 37.500 4.40 4.40 0.00 3.06
2441 2522 6.017605 GCAATCTACCAAACACATCCTAGATG 60.018 42.308 3.06 3.06 0.00 2.90
2442 2523 6.058183 GCAATCTACCAAACACATCCTAGAT 58.942 40.000 0.00 0.00 0.00 1.98
2443 2524 5.045942 TGCAATCTACCAAACACATCCTAGA 60.046 40.000 0.00 0.00 0.00 2.43
2444 2525 5.185454 TGCAATCTACCAAACACATCCTAG 58.815 41.667 0.00 0.00 0.00 3.02
2452 2533 4.947388 GGACCTAATGCAATCTACCAAACA 59.053 41.667 0.00 0.00 0.00 2.83
2453 2534 4.947388 TGGACCTAATGCAATCTACCAAAC 59.053 41.667 0.00 0.00 0.00 2.93
2462 2543 2.578021 ACCTGACTGGACCTAATGCAAT 59.422 45.455 5.22 0.00 39.71 3.56
2463 2544 1.985159 ACCTGACTGGACCTAATGCAA 59.015 47.619 5.22 0.00 39.71 4.08
2478 2559 0.321346 TTCTTCATGCGCAGACCTGA 59.679 50.000 18.32 12.24 0.00 3.86
2483 2564 1.135315 GCCAAATTCTTCATGCGCAGA 60.135 47.619 18.32 10.94 0.00 4.26
2487 2568 0.531657 TGGGCCAAATTCTTCATGCG 59.468 50.000 2.13 0.00 0.00 4.73
2490 2571 3.588396 ACCAAATGGGCCAAATTCTTCAT 59.412 39.130 11.89 0.00 42.05 2.57
2491 2572 2.978278 ACCAAATGGGCCAAATTCTTCA 59.022 40.909 11.89 0.00 42.05 3.02
2493 2574 3.753815 CAACCAAATGGGCCAAATTCTT 58.246 40.909 11.89 0.00 42.05 2.52
2496 2577 1.424684 AGCAACCAAATGGGCCAAATT 59.575 42.857 11.89 6.16 42.05 1.82
2497 2578 1.066471 AGCAACCAAATGGGCCAAAT 58.934 45.000 11.89 0.00 42.05 2.32
2516 2597 3.615592 GCCAAAAATCAGATGCAGCTCAA 60.616 43.478 0.00 0.00 0.00 3.02
2529 2610 4.394920 TCAGATTCGTACTGGCCAAAAATC 59.605 41.667 7.01 11.36 36.22 2.17
2531 2612 3.745799 TCAGATTCGTACTGGCCAAAAA 58.254 40.909 7.01 0.00 36.22 1.94
2532 2613 3.410631 TCAGATTCGTACTGGCCAAAA 57.589 42.857 7.01 0.00 36.22 2.44
2533 2614 3.410631 TTCAGATTCGTACTGGCCAAA 57.589 42.857 7.01 0.00 36.22 3.28
2575 2656 1.680249 GGCTGATTCGGCTTTTCCTCT 60.680 52.381 16.73 0.00 35.82 3.69
2582 2663 0.958822 AAAAACGGCTGATTCGGCTT 59.041 45.000 16.73 1.98 35.82 4.35
2592 2673 3.723348 GGCTCGCGAAAAACGGCT 61.723 61.111 11.33 0.00 42.83 5.52
2625 2721 1.452145 GCACTTCCCCAAGCGTGAAA 61.452 55.000 0.00 0.00 32.09 2.69
2627 2723 2.281484 GCACTTCCCCAAGCGTGA 60.281 61.111 0.00 0.00 32.09 4.35
2633 2729 2.528127 TCTCCCGCACTTCCCCAA 60.528 61.111 0.00 0.00 0.00 4.12
2656 2752 1.100510 TGGGGAGTTATGAGACGTCG 58.899 55.000 10.46 0.00 0.00 5.12
2675 2771 0.625683 AGGTGGATGGGAAGGAGCAT 60.626 55.000 0.00 0.00 0.00 3.79
2689 2785 1.127567 TGAACTGGTGAGGGAGGTGG 61.128 60.000 0.00 0.00 0.00 4.61
2694 2790 1.816863 GAGCGTGAACTGGTGAGGGA 61.817 60.000 0.00 0.00 0.00 4.20
2701 2797 1.132262 GAGAGAGAGAGCGTGAACTGG 59.868 57.143 0.00 0.00 0.00 4.00
2710 2806 1.771255 AGAGAGAGGGAGAGAGAGAGC 59.229 57.143 0.00 0.00 0.00 4.09
2712 2808 3.051803 AGAGAGAGAGAGGGAGAGAGAGA 60.052 52.174 0.00 0.00 0.00 3.10
2714 2810 3.041211 CAGAGAGAGAGAGGGAGAGAGA 58.959 54.545 0.00 0.00 0.00 3.10
2724 2820 5.353956 CAGAGAAATCGAACAGAGAGAGAGA 59.646 44.000 0.00 0.00 0.00 3.10
2728 2824 5.163571 CCATCAGAGAAATCGAACAGAGAGA 60.164 44.000 0.00 0.00 0.00 3.10
2730 2826 4.679106 GCCATCAGAGAAATCGAACAGAGA 60.679 45.833 0.00 0.00 0.00 3.10
2731 2827 3.555139 GCCATCAGAGAAATCGAACAGAG 59.445 47.826 0.00 0.00 0.00 3.35
2732 2828 3.055891 TGCCATCAGAGAAATCGAACAGA 60.056 43.478 0.00 0.00 0.00 3.41
2734 2830 3.055891 TCTGCCATCAGAGAAATCGAACA 60.056 43.478 0.00 0.00 43.95 3.18
2768 2869 3.580319 GAGTGGGTGGGGCTTGGT 61.580 66.667 0.00 0.00 0.00 3.67
2787 2889 0.813184 ATTTGTTGCTGGCGATGAGG 59.187 50.000 0.00 0.00 0.00 3.86
2788 2890 1.202222 GGATTTGTTGCTGGCGATGAG 60.202 52.381 0.00 0.00 0.00 2.90
2797 2899 3.903090 TCTTTTGGATGGGATTTGTTGCT 59.097 39.130 0.00 0.00 0.00 3.91
2801 2903 3.834231 CACCTCTTTTGGATGGGATTTGT 59.166 43.478 0.00 0.00 0.00 2.83
2803 2905 3.077391 TCCACCTCTTTTGGATGGGATTT 59.923 43.478 0.00 0.00 38.28 2.17
2815 2917 1.678970 GGCGGCAATCCACCTCTTT 60.679 57.895 3.07 0.00 31.71 2.52
2816 2918 2.044946 GGCGGCAATCCACCTCTT 60.045 61.111 3.07 0.00 31.71 2.85
2846 2949 2.716244 CCGTCGAGAGATCCCGTG 59.284 66.667 0.00 0.00 45.19 4.94
2874 2977 0.250295 TGTTGCAGAAAGAGGACGGG 60.250 55.000 0.00 0.00 0.00 5.28
2877 2980 2.626088 GCATGTTGCAGAAAGAGGAC 57.374 50.000 0.00 0.00 44.26 3.85
2931 3034 3.148279 GGTGGCGGAGTCGGAGAT 61.148 66.667 1.18 0.00 40.67 2.75
2932 3035 4.361971 AGGTGGCGGAGTCGGAGA 62.362 66.667 1.18 0.00 36.79 3.71
2949 3052 2.664851 CGACAAGCTCCCGCAACA 60.665 61.111 0.00 0.00 39.10 3.33
2951 3054 2.357034 GACGACAAGCTCCCGCAA 60.357 61.111 0.00 0.00 39.10 4.85
2955 3058 1.376037 CCCAAGACGACAAGCTCCC 60.376 63.158 0.00 0.00 0.00 4.30
2962 3065 0.179234 TTGTTGAGCCCAAGACGACA 59.821 50.000 0.00 0.00 32.06 4.35
2963 3066 0.586802 GTTGTTGAGCCCAAGACGAC 59.413 55.000 0.00 0.00 32.06 4.34
2966 3069 1.268539 CGTTGTTGTTGAGCCCAAGAC 60.269 52.381 0.00 0.00 32.06 3.01
2988 3091 2.203209 GCGGCGGGGATTGAATCT 60.203 61.111 9.78 0.00 0.00 2.40
2989 3092 3.287520 GGCGGCGGGGATTGAATC 61.288 66.667 9.78 0.00 0.00 2.52
3005 3109 1.446272 GGTCGGCGAAGAACAGAGG 60.446 63.158 12.92 0.00 0.00 3.69
3012 3116 3.379445 GAGTGGGGTCGGCGAAGA 61.379 66.667 12.92 0.00 0.00 2.87
3013 3117 2.521958 AATGAGTGGGGTCGGCGAAG 62.522 60.000 12.92 0.00 0.00 3.79
3016 3120 2.511600 GAATGAGTGGGGTCGGCG 60.512 66.667 0.00 0.00 0.00 6.46
3026 3130 2.907042 AGGAGAAAACCCTCGAATGAGT 59.093 45.455 0.00 0.00 40.85 3.41
3047 3172 2.664851 CCTTGCACCGAACGCAGA 60.665 61.111 0.00 0.00 41.18 4.26
3088 3213 1.006805 CGCCGGCTAGAAGATGAGG 60.007 63.158 26.68 0.00 0.00 3.86
3092 3217 2.107141 GCACGCCGGCTAGAAGAT 59.893 61.111 26.68 0.00 0.00 2.40
3107 3232 2.050714 GTCGTGTTCCTCGTCGCA 60.051 61.111 0.00 0.00 0.00 5.10
3117 3242 2.338984 GAGGGTCGCAGTCGTGTT 59.661 61.111 0.00 0.00 36.96 3.32
3118 3243 4.039357 CGAGGGTCGCAGTCGTGT 62.039 66.667 0.00 0.00 36.96 4.49
3119 3244 2.191354 TTACGAGGGTCGCAGTCGTG 62.191 60.000 12.58 0.00 46.01 4.35
3125 3250 2.185867 GCCATTACGAGGGTCGCA 59.814 61.111 0.00 0.00 45.12 5.10
3132 3257 1.134788 AGAAGAACCGGCCATTACGAG 60.135 52.381 0.00 0.00 0.00 4.18
3136 3261 3.606687 GAAGAAGAAGAACCGGCCATTA 58.393 45.455 0.00 0.00 0.00 1.90
3161 3286 2.856000 AAGAGGGGTGGTGCTGCT 60.856 61.111 0.00 0.00 0.00 4.24
3164 3289 2.936032 GGGAAGAGGGGTGGTGCT 60.936 66.667 0.00 0.00 0.00 4.40
3167 3292 2.606826 GACGGGAAGAGGGGTGGT 60.607 66.667 0.00 0.00 0.00 4.16
3168 3293 3.771160 CGACGGGAAGAGGGGTGG 61.771 72.222 0.00 0.00 0.00 4.61
3226 3352 2.694109 GGAGATAAGGAGCTTACCGTGT 59.306 50.000 0.00 0.00 34.73 4.49
3288 3416 7.318141 TCCGTAAACTCTCGATCACTATTTTT 58.682 34.615 0.00 0.00 0.00 1.94
3289 3417 6.860080 TCCGTAAACTCTCGATCACTATTTT 58.140 36.000 0.00 0.00 0.00 1.82
3290 3418 6.446781 TCCGTAAACTCTCGATCACTATTT 57.553 37.500 0.00 0.00 0.00 1.40
3291 3419 6.487331 AGATCCGTAAACTCTCGATCACTATT 59.513 38.462 0.00 0.00 0.00 1.73
3292 3420 5.998981 AGATCCGTAAACTCTCGATCACTAT 59.001 40.000 0.00 0.00 0.00 2.12
3293 3421 5.366460 AGATCCGTAAACTCTCGATCACTA 58.634 41.667 0.00 0.00 0.00 2.74
3294 3422 4.200874 AGATCCGTAAACTCTCGATCACT 58.799 43.478 0.00 0.00 0.00 3.41
3295 3423 4.555348 AGATCCGTAAACTCTCGATCAC 57.445 45.455 0.00 0.00 0.00 3.06
3296 3424 4.213694 GCTAGATCCGTAAACTCTCGATCA 59.786 45.833 0.00 0.00 0.00 2.92
3297 3425 4.213694 TGCTAGATCCGTAAACTCTCGATC 59.786 45.833 0.00 0.00 0.00 3.69
3298 3426 4.135306 TGCTAGATCCGTAAACTCTCGAT 58.865 43.478 0.00 0.00 0.00 3.59
3299 3427 3.538591 TGCTAGATCCGTAAACTCTCGA 58.461 45.455 0.00 0.00 0.00 4.04
3300 3428 3.965292 TGCTAGATCCGTAAACTCTCG 57.035 47.619 0.00 0.00 0.00 4.04
3301 3429 8.541312 GTTATTTTGCTAGATCCGTAAACTCTC 58.459 37.037 0.00 0.00 0.00 3.20
3302 3430 8.258708 AGTTATTTTGCTAGATCCGTAAACTCT 58.741 33.333 0.00 0.00 0.00 3.24
3303 3431 8.421673 AGTTATTTTGCTAGATCCGTAAACTC 57.578 34.615 0.00 0.00 0.00 3.01
3304 3432 8.665685 CAAGTTATTTTGCTAGATCCGTAAACT 58.334 33.333 0.00 0.00 0.00 2.66
3305 3433 7.908601 CCAAGTTATTTTGCTAGATCCGTAAAC 59.091 37.037 0.00 0.00 0.00 2.01
3306 3434 7.414762 GCCAAGTTATTTTGCTAGATCCGTAAA 60.415 37.037 0.00 0.00 0.00 2.01
3307 3435 6.037830 GCCAAGTTATTTTGCTAGATCCGTAA 59.962 38.462 0.00 0.00 0.00 3.18
3308 3436 5.526111 GCCAAGTTATTTTGCTAGATCCGTA 59.474 40.000 0.00 0.00 0.00 4.02
3309 3437 4.335594 GCCAAGTTATTTTGCTAGATCCGT 59.664 41.667 0.00 0.00 0.00 4.69
3310 3438 4.335315 TGCCAAGTTATTTTGCTAGATCCG 59.665 41.667 0.00 0.00 0.00 4.18
3311 3439 5.835113 TGCCAAGTTATTTTGCTAGATCC 57.165 39.130 0.00 0.00 0.00 3.36
3312 3440 7.260603 ACAATGCCAAGTTATTTTGCTAGATC 58.739 34.615 0.00 0.00 0.00 2.75
3313 3441 7.174107 ACAATGCCAAGTTATTTTGCTAGAT 57.826 32.000 0.00 0.00 0.00 1.98
3314 3442 6.588719 ACAATGCCAAGTTATTTTGCTAGA 57.411 33.333 0.00 0.00 0.00 2.43
3315 3443 7.599998 AGAAACAATGCCAAGTTATTTTGCTAG 59.400 33.333 0.00 0.00 0.00 3.42
3316 3444 7.441017 AGAAACAATGCCAAGTTATTTTGCTA 58.559 30.769 0.00 0.00 0.00 3.49
3317 3445 6.290605 AGAAACAATGCCAAGTTATTTTGCT 58.709 32.000 0.00 0.00 0.00 3.91
3318 3446 6.544038 AGAAACAATGCCAAGTTATTTTGC 57.456 33.333 0.00 0.00 0.00 3.68
3319 3447 9.132521 CTCTAGAAACAATGCCAAGTTATTTTG 57.867 33.333 0.00 0.00 0.00 2.44
3320 3448 8.860088 ACTCTAGAAACAATGCCAAGTTATTTT 58.140 29.630 0.00 0.00 0.00 1.82
3321 3449 8.409358 ACTCTAGAAACAATGCCAAGTTATTT 57.591 30.769 0.00 0.00 0.00 1.40
3322 3450 9.515226 TTACTCTAGAAACAATGCCAAGTTATT 57.485 29.630 0.00 0.00 0.00 1.40
3323 3451 9.515226 TTTACTCTAGAAACAATGCCAAGTTAT 57.485 29.630 0.00 0.00 0.00 1.89
3324 3452 8.911918 TTTACTCTAGAAACAATGCCAAGTTA 57.088 30.769 0.00 0.00 0.00 2.24
3325 3453 7.817418 TTTACTCTAGAAACAATGCCAAGTT 57.183 32.000 0.00 0.00 0.00 2.66
3326 3454 7.817418 TTTTACTCTAGAAACAATGCCAAGT 57.183 32.000 0.00 0.00 0.00 3.16
3327 3455 7.970614 GGATTTTACTCTAGAAACAATGCCAAG 59.029 37.037 0.00 0.00 0.00 3.61
3328 3456 7.669722 AGGATTTTACTCTAGAAACAATGCCAA 59.330 33.333 0.00 0.00 0.00 4.52
3329 3457 7.175104 AGGATTTTACTCTAGAAACAATGCCA 58.825 34.615 0.00 0.00 0.00 4.92
3330 3458 7.631717 AGGATTTTACTCTAGAAACAATGCC 57.368 36.000 0.00 0.00 0.00 4.40
3342 3470 9.059023 ACCCTAAACTTGATAGGATTTTACTCT 57.941 33.333 1.19 0.00 42.16 3.24
3347 3475 9.816787 TTGTTACCCTAAACTTGATAGGATTTT 57.183 29.630 1.19 0.00 42.16 1.82
3348 3476 9.816787 TTTGTTACCCTAAACTTGATAGGATTT 57.183 29.630 1.19 0.00 42.16 2.17
3349 3477 9.239551 GTTTGTTACCCTAAACTTGATAGGATT 57.760 33.333 1.19 0.00 42.16 3.01
3350 3478 8.387813 TGTTTGTTACCCTAAACTTGATAGGAT 58.612 33.333 1.19 0.00 42.16 3.24
3351 3479 7.747690 TGTTTGTTACCCTAAACTTGATAGGA 58.252 34.615 1.19 0.00 42.16 2.94
3352 3480 7.989416 TGTTTGTTACCCTAAACTTGATAGG 57.011 36.000 0.00 0.00 39.76 2.57
3355 3483 9.975218 ATCTATGTTTGTTACCCTAAACTTGAT 57.025 29.630 0.00 0.00 37.60 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.