Multiple sequence alignment - TraesCS1D01G424900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G424900 chr1D 100.000 4273 0 0 1 4273 479034208 479038480 0.000000e+00 7891.0
1 TraesCS1D01G424900 chr1D 90.794 630 50 6 2131 2756 478982577 478983202 0.000000e+00 835.0
2 TraesCS1D01G424900 chr1D 81.370 365 60 6 2756 3118 478983289 478983647 1.500000e-74 291.0
3 TraesCS1D01G424900 chr1D 83.621 116 17 1 2021 2136 478982033 478982146 1.620000e-19 108.0
4 TraesCS1D01G424900 chr1A 90.380 2131 109 39 936 3033 575246238 575248305 0.000000e+00 2713.0
5 TraesCS1D01G424900 chr1A 90.391 1280 64 23 1147 2409 575228081 575229318 0.000000e+00 1628.0
6 TraesCS1D01G424900 chr1A 94.355 372 20 1 2386 2757 575241686 575242056 1.720000e-158 569.0
7 TraesCS1D01G424900 chr1A 91.960 199 4 5 936 1128 575227767 575227959 7.040000e-68 268.0
8 TraesCS1D01G424900 chr1A 77.897 466 80 17 1511 1974 575232827 575233271 7.040000e-68 268.0
9 TraesCS1D01G424900 chr1A 89.730 185 9 5 3470 3649 575248795 575248974 1.200000e-55 228.0
10 TraesCS1D01G424900 chr1A 89.730 185 9 5 3470 3649 575252100 575252279 1.200000e-55 228.0
11 TraesCS1D01G424900 chr1A 85.308 211 28 2 2760 2968 575242109 575242318 9.310000e-52 215.0
12 TraesCS1D01G424900 chr1A 77.778 198 28 8 2386 2579 575193557 575193742 1.620000e-19 108.0
13 TraesCS1D01G424900 chr1A 93.333 60 4 0 3657 3716 369574651 369574592 5.890000e-14 89.8
14 TraesCS1D01G424900 chr1B 88.169 2223 171 40 1313 3469 667213776 667215972 0.000000e+00 2564.0
15 TraesCS1D01G424900 chr1B 94.166 977 33 7 312 1266 667212803 667213777 0.000000e+00 1467.0
16 TraesCS1D01G424900 chr1B 89.362 329 31 4 2414 2741 667072828 667073153 1.110000e-110 411.0
17 TraesCS1D01G424900 chr1B 82.222 225 21 6 2517 2741 666935210 666935005 4.390000e-40 176.0
18 TraesCS1D01G424900 chr6A 87.759 580 58 6 312 888 559726938 559726369 0.000000e+00 665.0
19 TraesCS1D01G424900 chr6A 86.889 389 48 2 3886 4272 197042529 197042142 2.360000e-117 433.0
20 TraesCS1D01G424900 chr6A 86.900 229 26 4 3658 3885 502507558 502507783 1.970000e-63 254.0
21 TraesCS1D01G424900 chr6A 85.333 225 28 4 3658 3882 534015710 534015491 1.200000e-55 228.0
22 TraesCS1D01G424900 chr4B 88.686 548 49 8 364 906 649362575 649362036 0.000000e+00 656.0
23 TraesCS1D01G424900 chr7D 89.013 537 47 6 311 845 620576096 620576622 0.000000e+00 654.0
24 TraesCS1D01G424900 chr7D 98.413 315 4 1 1 315 617427675 617427362 1.740000e-153 553.0
25 TraesCS1D01G424900 chr7D 88.832 394 35 4 3882 4273 481619261 481619647 3.870000e-130 475.0
26 TraesCS1D01G424900 chr7D 86.420 243 16 6 3660 3888 2676437 2676676 2.550000e-62 250.0
27 TraesCS1D01G424900 chr7D 73.875 578 92 43 320 888 176470204 176470731 4.390000e-40 176.0
28 TraesCS1D01G424900 chr3D 99.355 310 2 0 1 310 606063125 606063434 2.880000e-156 562.0
29 TraesCS1D01G424900 chr3D 99.035 311 2 1 1 310 164384243 164384553 1.340000e-154 556.0
30 TraesCS1D01G424900 chr3D 88.295 393 38 3 3888 4272 355808766 355808374 8.370000e-127 464.0
31 TraesCS1D01G424900 chr3D 83.613 238 27 10 3660 3888 474214602 474214368 3.350000e-51 213.0
32 TraesCS1D01G424900 chr6D 99.035 311 2 1 1 310 1007763 1008073 1.340000e-154 556.0
33 TraesCS1D01G424900 chr6D 99.035 311 2 1 1 310 11465598 11465908 1.340000e-154 556.0
34 TraesCS1D01G424900 chr6D 98.722 313 4 0 1 313 472337327 472337015 1.340000e-154 556.0
35 TraesCS1D01G424900 chr4D 98.423 317 4 1 1 316 139625090 139625406 1.340000e-154 556.0
36 TraesCS1D01G424900 chr2D 99.035 311 2 1 1 310 7584917 7585227 1.340000e-154 556.0
37 TraesCS1D01G424900 chr2D 88.205 195 17 6 3697 3888 455934285 455934476 1.200000e-55 228.0
38 TraesCS1D01G424900 chr5D 97.516 322 7 1 1 322 430479964 430480284 2.250000e-152 549.0
39 TraesCS1D01G424900 chr5D 87.281 228 21 5 3660 3886 499852591 499852811 1.970000e-63 254.0
40 TraesCS1D01G424900 chr5D 95.890 73 3 0 320 392 234042130 234042058 7.510000e-23 119.0
41 TraesCS1D01G424900 chr5D 88.406 69 7 1 322 390 182075142 182075075 9.850000e-12 82.4
42 TraesCS1D01G424900 chr7B 87.089 395 45 5 3882 4272 37419617 37419225 3.920000e-120 442.0
43 TraesCS1D01G424900 chr7B 80.000 180 26 7 320 489 586298679 586298500 1.610000e-24 124.0
44 TraesCS1D01G424900 chr6B 87.023 393 48 2 3882 4272 693251061 693250670 1.410000e-119 440.0
45 TraesCS1D01G424900 chr6B 85.043 234 26 6 3658 3888 124627143 124626916 3.320000e-56 230.0
46 TraesCS1D01G424900 chr3B 86.802 394 50 1 3882 4273 546198848 546199241 5.070000e-119 438.0
47 TraesCS1D01G424900 chr3B 86.026 229 23 6 3660 3888 670192872 670192653 1.990000e-58 237.0
48 TraesCS1D01G424900 chr3A 86.802 394 49 2 3882 4273 608180737 608180345 1.820000e-118 436.0
49 TraesCS1D01G424900 chr2A 86.667 390 43 3 3882 4269 775567690 775568072 1.420000e-114 424.0
50 TraesCS1D01G424900 chr7A 85.965 399 42 5 3882 4273 645107141 645107532 8.550000e-112 414.0
51 TraesCS1D01G424900 chr7A 89.706 68 5 2 3645 3712 664629320 664629255 7.610000e-13 86.1
52 TraesCS1D01G424900 chr4A 86.475 244 17 9 3658 3888 596868395 596868635 1.970000e-63 254.0
53 TraesCS1D01G424900 chr5A 75.336 596 100 30 315 888 206714473 206713903 4.270000e-60 243.0
54 TraesCS1D01G424900 chr5A 75.298 587 99 29 323 888 206720278 206719717 5.520000e-59 239.0
55 TraesCS1D01G424900 chr5A 92.982 57 2 2 3595 3649 568680244 568680188 9.850000e-12 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G424900 chr1D 479034208 479038480 4272 False 7891.000000 7891 100.000000 1 4273 1 chr1D.!!$F1 4272
1 TraesCS1D01G424900 chr1D 478982033 478983647 1614 False 411.333333 835 85.261667 2021 3118 3 chr1D.!!$F2 1097
2 TraesCS1D01G424900 chr1A 575241686 575252279 10593 False 790.600000 2713 89.900600 936 3649 5 chr1A.!!$F3 2713
3 TraesCS1D01G424900 chr1A 575227767 575233271 5504 False 721.333333 1628 86.749333 936 2409 3 chr1A.!!$F2 1473
4 TraesCS1D01G424900 chr1B 667212803 667215972 3169 False 2015.500000 2564 91.167500 312 3469 2 chr1B.!!$F2 3157
5 TraesCS1D01G424900 chr6A 559726369 559726938 569 True 665.000000 665 87.759000 312 888 1 chr6A.!!$R3 576
6 TraesCS1D01G424900 chr4B 649362036 649362575 539 True 656.000000 656 88.686000 364 906 1 chr4B.!!$R1 542
7 TraesCS1D01G424900 chr7D 620576096 620576622 526 False 654.000000 654 89.013000 311 845 1 chr7D.!!$F4 534
8 TraesCS1D01G424900 chr5A 206713903 206714473 570 True 243.000000 243 75.336000 315 888 1 chr5A.!!$R1 573
9 TraesCS1D01G424900 chr5A 206719717 206720278 561 True 239.000000 239 75.298000 323 888 1 chr5A.!!$R2 565

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
203 204 0.029167 GACTCTACTTCCCGCTACGC 59.971 60.0 0.00 0.0 0.0 4.42 F
308 309 0.037975 TTTCTGTCGCGTTCCCCTAC 60.038 55.0 5.77 0.0 0.0 3.18 F
1693 5441 0.447801 CGGCGGAGAAATCAAACTGG 59.552 55.0 0.00 0.0 0.0 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1351 5095 0.926155 CGCCACAGATCAATCAGACG 59.074 55.000 0.0 0.0 0.00 4.18 R
1821 5569 1.592223 GACCAGTTCCTCCCTCACG 59.408 63.158 0.0 0.0 0.00 4.35 R
3651 10298 0.246635 TGGAGTTGCTCTAAGTCGCC 59.753 55.000 0.0 0.0 39.23 5.54 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.377656 GAAGGGCTGTCCGAGTGA 58.622 61.111 0.00 0.00 41.52 3.41
18 19 1.079750 GAAGGGCTGTCCGAGTGAC 60.080 63.158 0.00 0.00 44.72 3.67
19 20 2.508586 GAAGGGCTGTCCGAGTGACC 62.509 65.000 0.00 0.00 43.78 4.02
20 21 3.311110 GGGCTGTCCGAGTGACCA 61.311 66.667 0.00 0.00 43.78 4.02
23 24 0.741221 GGCTGTCCGAGTGACCATTC 60.741 60.000 0.00 0.00 43.78 2.67
24 25 1.078759 GCTGTCCGAGTGACCATTCG 61.079 60.000 7.77 7.77 43.78 3.34
25 26 0.526211 CTGTCCGAGTGACCATTCGA 59.474 55.000 14.97 1.04 43.78 3.71
26 27 0.526211 TGTCCGAGTGACCATTCGAG 59.474 55.000 14.97 6.74 43.78 4.04
27 28 0.526662 GTCCGAGTGACCATTCGAGT 59.473 55.000 14.97 0.00 42.14 4.18
29 30 1.616865 TCCGAGTGACCATTCGAGTTT 59.383 47.619 14.97 0.00 42.14 2.66
31 32 1.649171 CGAGTGACCATTCGAGTTTCG 59.351 52.381 8.90 0.00 42.14 3.46
41 42 0.886563 TCGAGTTTCGAAGGTCCTCC 59.113 55.000 0.00 0.00 46.90 4.30
42 43 0.108756 CGAGTTTCGAAGGTCCTCCC 60.109 60.000 0.00 0.00 43.74 4.30
43 44 0.108756 GAGTTTCGAAGGTCCTCCCG 60.109 60.000 0.00 7.18 38.74 5.14
44 45 0.541296 AGTTTCGAAGGTCCTCCCGA 60.541 55.000 11.08 11.08 38.74 5.14
46 47 0.606604 TTTCGAAGGTCCTCCCGAAG 59.393 55.000 21.01 0.84 38.14 3.79
60 61 4.373116 GAAGGGCTGTCCGCGACA 62.373 66.667 8.23 9.55 40.50 4.35
61 62 4.681978 AAGGGCTGTCCGCGACAC 62.682 66.667 8.23 4.10 37.67 3.67
90 91 4.796231 CTGTTCGACCGCCTCCCG 62.796 72.222 0.00 0.00 0.00 5.14
107 108 2.422231 CGGAGGGCTGTCTGAGGAG 61.422 68.421 0.00 0.00 0.00 3.69
108 109 2.730524 GGAGGGCTGTCTGAGGAGC 61.731 68.421 0.86 0.86 34.23 4.70
109 110 1.986757 GAGGGCTGTCTGAGGAGCA 60.987 63.158 10.00 0.00 36.90 4.26
110 111 1.958902 GAGGGCTGTCTGAGGAGCAG 61.959 65.000 10.00 0.73 46.31 4.24
120 121 2.783379 TGAGGAGCAGATGAGGGTAT 57.217 50.000 0.00 0.00 0.00 2.73
121 122 3.903530 TGAGGAGCAGATGAGGGTATA 57.096 47.619 0.00 0.00 0.00 1.47
122 123 3.501349 TGAGGAGCAGATGAGGGTATAC 58.499 50.000 0.00 0.00 0.00 1.47
123 124 3.117131 TGAGGAGCAGATGAGGGTATACA 60.117 47.826 5.01 0.00 0.00 2.29
124 125 4.093011 GAGGAGCAGATGAGGGTATACAT 58.907 47.826 5.01 0.00 0.00 2.29
125 126 4.093011 AGGAGCAGATGAGGGTATACATC 58.907 47.826 5.01 2.92 41.92 3.06
126 127 3.196685 GGAGCAGATGAGGGTATACATCC 59.803 52.174 5.01 0.00 42.38 3.51
127 128 4.093011 GAGCAGATGAGGGTATACATCCT 58.907 47.826 5.01 2.65 42.38 3.24
132 133 0.526662 GAGGGTATACATCCTCGCGG 59.473 60.000 6.13 0.00 39.95 6.46
133 134 0.178970 AGGGTATACATCCTCGCGGT 60.179 55.000 6.13 0.00 0.00 5.68
135 136 1.604693 GGGTATACATCCTCGCGGTTG 60.605 57.143 6.13 0.91 36.32 3.77
136 137 1.604693 GGTATACATCCTCGCGGTTGG 60.605 57.143 6.13 6.84 34.85 3.77
137 138 0.677288 TATACATCCTCGCGGTTGGG 59.323 55.000 6.13 4.04 34.85 4.12
138 139 1.046472 ATACATCCTCGCGGTTGGGA 61.046 55.000 6.13 9.83 34.85 4.37
144 145 3.552384 TCGCGGTTGGGAGGTTGT 61.552 61.111 6.13 0.00 32.60 3.32
145 146 2.208619 TCGCGGTTGGGAGGTTGTA 61.209 57.895 6.13 0.00 32.60 2.41
147 148 0.885596 CGCGGTTGGGAGGTTGTAAA 60.886 55.000 0.00 0.00 0.00 2.01
148 149 1.541379 GCGGTTGGGAGGTTGTAAAT 58.459 50.000 0.00 0.00 0.00 1.40
149 150 1.471287 GCGGTTGGGAGGTTGTAAATC 59.529 52.381 0.00 0.00 0.00 2.17
151 152 2.290705 CGGTTGGGAGGTTGTAAATCCT 60.291 50.000 0.00 0.00 36.70 3.24
152 153 3.054948 CGGTTGGGAGGTTGTAAATCCTA 60.055 47.826 0.00 0.00 33.83 2.94
154 155 3.926058 TGGGAGGTTGTAAATCCTAGC 57.074 47.619 0.00 0.00 33.83 3.42
155 156 3.460825 TGGGAGGTTGTAAATCCTAGCT 58.539 45.455 0.00 0.00 33.83 3.32
156 157 3.199946 TGGGAGGTTGTAAATCCTAGCTG 59.800 47.826 0.00 0.00 33.83 4.24
157 158 3.206964 GGAGGTTGTAAATCCTAGCTGC 58.793 50.000 0.00 0.00 33.83 5.25
158 159 2.866762 GAGGTTGTAAATCCTAGCTGCG 59.133 50.000 0.00 0.00 33.83 5.18
160 161 1.940613 GTTGTAAATCCTAGCTGCGGG 59.059 52.381 0.00 8.09 0.00 6.13
161 162 0.468226 TGTAAATCCTAGCTGCGGGG 59.532 55.000 13.06 10.36 0.00 5.73
163 164 1.348036 GTAAATCCTAGCTGCGGGGAT 59.652 52.381 18.68 18.68 41.09 3.85
164 165 0.398318 AAATCCTAGCTGCGGGGATC 59.602 55.000 22.48 0.00 38.73 3.36
165 166 0.472734 AATCCTAGCTGCGGGGATCT 60.473 55.000 22.48 13.68 38.73 2.75
166 167 1.190833 ATCCTAGCTGCGGGGATCTG 61.191 60.000 18.68 0.00 35.16 2.90
167 168 2.030262 CTAGCTGCGGGGATCTGC 59.970 66.667 0.00 0.00 45.23 4.26
176 177 4.241555 GGGATCTGCACCGCCGAT 62.242 66.667 0.00 0.00 35.34 4.18
177 178 2.663188 GGATCTGCACCGCCGATC 60.663 66.667 10.77 10.77 44.56 3.69
178 179 3.032609 GATCTGCACCGCCGATCG 61.033 66.667 8.51 8.51 38.89 3.69
179 180 3.774959 GATCTGCACCGCCGATCGT 62.775 63.158 15.09 0.00 38.89 3.73
180 181 3.774959 ATCTGCACCGCCGATCGTC 62.775 63.158 15.09 0.00 36.19 4.20
181 182 4.794439 CTGCACCGCCGATCGTCA 62.794 66.667 15.09 1.36 36.19 4.35
182 183 4.141965 TGCACCGCCGATCGTCAT 62.142 61.111 15.09 0.00 36.19 3.06
183 184 3.330853 GCACCGCCGATCGTCATC 61.331 66.667 15.09 0.00 36.19 2.92
196 197 2.286872 TCGTCATCGACTCTACTTCCC 58.713 52.381 0.00 0.00 41.35 3.97
197 198 1.003759 CGTCATCGACTCTACTTCCCG 60.004 57.143 0.00 0.00 39.71 5.14
201 202 1.661341 TCGACTCTACTTCCCGCTAC 58.339 55.000 0.00 0.00 0.00 3.58
202 203 0.304098 CGACTCTACTTCCCGCTACG 59.696 60.000 0.00 0.00 0.00 3.51
203 204 0.029167 GACTCTACTTCCCGCTACGC 59.971 60.000 0.00 0.00 0.00 4.42
205 206 1.134280 ACTCTACTTCCCGCTACGCTA 60.134 52.381 0.00 0.00 0.00 4.26
207 208 0.041488 CTACTTCCCGCTACGCTACG 60.041 60.000 0.00 0.00 0.00 3.51
209 210 1.009900 CTTCCCGCTACGCTACGAG 60.010 63.158 0.00 0.00 0.00 4.18
211 212 1.709147 TTCCCGCTACGCTACGAGTC 61.709 60.000 0.00 0.00 0.00 3.36
213 214 2.053291 CGCTACGCTACGAGTCGG 60.053 66.667 18.30 0.41 0.00 4.79
214 215 2.806856 CGCTACGCTACGAGTCGGT 61.807 63.158 18.30 7.43 0.00 4.69
215 216 1.482621 CGCTACGCTACGAGTCGGTA 61.483 60.000 18.30 8.23 0.00 4.02
216 217 0.652592 GCTACGCTACGAGTCGGTAA 59.347 55.000 18.30 0.74 0.00 2.85
217 218 1.593311 GCTACGCTACGAGTCGGTAAC 60.593 57.143 18.30 1.16 0.00 2.50
235 236 6.927933 GGTAACGAAAAAGATCAAACCATG 57.072 37.500 0.00 0.00 0.00 3.66
236 237 6.443792 GGTAACGAAAAAGATCAAACCATGT 58.556 36.000 0.00 0.00 0.00 3.21
238 239 8.241367 GGTAACGAAAAAGATCAAACCATGTAT 58.759 33.333 0.00 0.00 0.00 2.29
239 240 9.061610 GTAACGAAAAAGATCAAACCATGTATG 57.938 33.333 0.00 0.00 0.00 2.39
240 241 6.092748 ACGAAAAAGATCAAACCATGTATGC 58.907 36.000 0.00 0.00 0.00 3.14
241 242 6.092092 CGAAAAAGATCAAACCATGTATGCA 58.908 36.000 0.00 0.00 0.00 3.96
242 243 6.252015 CGAAAAAGATCAAACCATGTATGCAG 59.748 38.462 0.00 0.00 0.00 4.41
243 244 6.594788 AAAAGATCAAACCATGTATGCAGT 57.405 33.333 0.00 0.00 0.00 4.40
244 245 5.824904 AAGATCAAACCATGTATGCAGTC 57.175 39.130 0.00 0.00 0.00 3.51
245 246 5.108187 AGATCAAACCATGTATGCAGTCT 57.892 39.130 0.00 0.00 0.00 3.24
246 247 5.121811 AGATCAAACCATGTATGCAGTCTC 58.878 41.667 0.00 0.00 0.00 3.36
247 248 3.609853 TCAAACCATGTATGCAGTCTCC 58.390 45.455 0.00 0.00 0.00 3.71
248 249 3.008923 TCAAACCATGTATGCAGTCTCCA 59.991 43.478 0.00 0.00 0.00 3.86
249 250 3.939740 AACCATGTATGCAGTCTCCAT 57.060 42.857 0.00 0.00 0.00 3.41
251 252 4.613925 ACCATGTATGCAGTCTCCATAG 57.386 45.455 0.00 0.00 0.00 2.23
252 253 3.969976 ACCATGTATGCAGTCTCCATAGT 59.030 43.478 0.00 0.00 0.00 2.12
253 254 4.202295 ACCATGTATGCAGTCTCCATAGTG 60.202 45.833 0.00 0.00 0.00 2.74
254 255 4.313282 CATGTATGCAGTCTCCATAGTGG 58.687 47.826 0.00 0.00 39.43 4.00
255 256 3.374764 TGTATGCAGTCTCCATAGTGGT 58.625 45.455 0.00 0.00 39.03 4.16
256 257 3.384789 TGTATGCAGTCTCCATAGTGGTC 59.615 47.826 0.00 0.00 39.03 4.02
257 258 1.195115 TGCAGTCTCCATAGTGGTCC 58.805 55.000 0.00 0.00 39.03 4.46
258 259 1.273267 TGCAGTCTCCATAGTGGTCCT 60.273 52.381 0.00 0.00 39.03 3.85
259 260 1.137872 GCAGTCTCCATAGTGGTCCTG 59.862 57.143 0.00 2.78 39.03 3.86
260 261 1.759445 CAGTCTCCATAGTGGTCCTGG 59.241 57.143 0.00 0.00 39.03 4.45
261 262 1.123928 GTCTCCATAGTGGTCCTGGG 58.876 60.000 0.00 0.00 39.03 4.45
262 263 0.691078 TCTCCATAGTGGTCCTGGGC 60.691 60.000 0.00 0.00 39.03 5.36
263 264 0.692419 CTCCATAGTGGTCCTGGGCT 60.692 60.000 0.00 0.00 39.03 5.19
264 265 0.982852 TCCATAGTGGTCCTGGGCTG 60.983 60.000 0.00 0.00 39.03 4.85
266 267 1.082954 ATAGTGGTCCTGGGCTGGT 59.917 57.895 0.00 0.00 0.00 4.00
267 268 1.274703 ATAGTGGTCCTGGGCTGGTG 61.275 60.000 0.00 0.00 0.00 4.17
271 272 3.702048 GTCCTGGGCTGGTGCGTA 61.702 66.667 0.00 0.00 40.82 4.42
273 274 4.473520 CCTGGGCTGGTGCGTAGG 62.474 72.222 0.00 0.00 40.82 3.18
275 276 3.665675 CTGGGCTGGTGCGTAGGTC 62.666 68.421 0.00 0.00 40.82 3.85
276 277 4.814294 GGGCTGGTGCGTAGGTCG 62.814 72.222 0.00 0.00 40.82 4.79
277 278 4.814294 GGCTGGTGCGTAGGTCGG 62.814 72.222 0.00 0.00 40.82 4.79
280 281 1.290955 CTGGTGCGTAGGTCGGAAA 59.709 57.895 0.00 0.00 42.24 3.13
281 282 0.108329 CTGGTGCGTAGGTCGGAAAT 60.108 55.000 0.00 0.00 42.24 2.17
282 283 0.322322 TGGTGCGTAGGTCGGAAATT 59.678 50.000 0.00 0.00 42.24 1.82
284 285 1.808343 GGTGCGTAGGTCGGAAATTTT 59.192 47.619 0.00 0.00 42.24 1.82
285 286 2.227149 GGTGCGTAGGTCGGAAATTTTT 59.773 45.455 0.00 0.00 42.24 1.94
303 304 2.461897 TTTGTTTTCTGTCGCGTTCC 57.538 45.000 5.77 0.00 0.00 3.62
304 305 0.658897 TTGTTTTCTGTCGCGTTCCC 59.341 50.000 5.77 0.00 0.00 3.97
306 307 0.883370 GTTTTCTGTCGCGTTCCCCT 60.883 55.000 5.77 0.00 0.00 4.79
308 309 0.037975 TTTCTGTCGCGTTCCCCTAC 60.038 55.000 5.77 0.00 0.00 3.18
309 310 1.180456 TTCTGTCGCGTTCCCCTACA 61.180 55.000 5.77 0.00 0.00 2.74
664 676 2.811514 GGCGGAGAGATCCATGGCA 61.812 63.158 6.96 0.00 0.00 4.92
712 724 1.753368 GAGAGGAATCAGGAGGGCGG 61.753 65.000 0.00 0.00 0.00 6.13
773 790 1.267121 TGCGAGGAGGGATTATAGGC 58.733 55.000 0.00 0.00 0.00 3.93
1143 4868 2.446994 ACACCACGTCTTCCCCCA 60.447 61.111 0.00 0.00 0.00 4.96
1144 4869 1.846124 ACACCACGTCTTCCCCCAT 60.846 57.895 0.00 0.00 0.00 4.00
1145 4870 1.078426 CACCACGTCTTCCCCCATC 60.078 63.158 0.00 0.00 0.00 3.51
1216 4946 1.135199 CGCTGCTAGGGTTACGAAAGA 60.135 52.381 0.00 0.00 0.00 2.52
1266 4996 1.716826 GCTCAGAAGCTGCTCATGGC 61.717 60.000 1.00 7.11 45.55 4.40
1283 5013 1.009829 GGCAGCACTAATTCGTCCAG 58.990 55.000 0.00 0.00 0.00 3.86
1325 5063 3.077519 GCGGCGGTAGACCAGTGAT 62.078 63.158 9.78 0.00 35.14 3.06
1344 5088 1.420430 TGGGGCTACTATGGTAGTGC 58.580 55.000 16.62 5.17 45.18 4.40
1351 5095 4.022155 GGCTACTATGGTAGTGCTAGGTTC 60.022 50.000 16.62 0.00 45.18 3.62
1354 5098 3.631227 ACTATGGTAGTGCTAGGTTCGTC 59.369 47.826 0.00 0.00 37.69 4.20
1355 5099 2.211250 TGGTAGTGCTAGGTTCGTCT 57.789 50.000 0.00 0.00 0.00 4.18
1418 5166 2.164865 CTCGGCTTCTGCTGGTCTGT 62.165 60.000 0.00 0.00 45.25 3.41
1445 5193 2.017138 TGCGTTCGCCTGATGATTAA 57.983 45.000 14.44 0.00 0.00 1.40
1524 5272 3.645975 CTGTTCAAACCGGCGCGT 61.646 61.111 8.43 0.00 0.00 6.01
1535 5283 4.129737 GGCGCGTAGAGGACAGCA 62.130 66.667 8.43 0.00 34.14 4.41
1536 5284 2.105128 GCGCGTAGAGGACAGCAT 59.895 61.111 8.43 0.00 33.08 3.79
1568 5316 3.314541 ACCTAGGTTAGCGTTCTTGTG 57.685 47.619 9.21 0.00 0.00 3.33
1569 5317 2.000447 CCTAGGTTAGCGTTCTTGTGC 59.000 52.381 0.00 0.00 0.00 4.57
1572 5320 1.000060 AGGTTAGCGTTCTTGTGCGTA 60.000 47.619 0.00 0.00 35.87 4.42
1573 5321 1.389106 GGTTAGCGTTCTTGTGCGTAG 59.611 52.381 0.00 0.00 35.87 3.51
1574 5322 2.322161 GTTAGCGTTCTTGTGCGTAGA 58.678 47.619 0.00 0.00 35.87 2.59
1577 5325 3.438297 AGCGTTCTTGTGCGTAGATAT 57.562 42.857 0.00 0.00 35.87 1.63
1604 5352 3.817084 CCTCGTAATATACCGAGTGACCA 59.183 47.826 17.65 0.00 46.91 4.02
1605 5353 4.320057 CCTCGTAATATACCGAGTGACCAC 60.320 50.000 17.65 0.00 46.91 4.16
1639 5387 1.335780 TGCTGCCACATTTTTAGCGTG 60.336 47.619 0.00 0.00 37.20 5.34
1693 5441 0.447801 CGGCGGAGAAATCAAACTGG 59.552 55.000 0.00 0.00 0.00 4.00
1703 5451 6.830838 GGAGAAATCAAACTGGGTATTGAGAT 59.169 38.462 0.00 0.00 38.80 2.75
1782 5530 2.483876 CAAGACACGAAAGAGCAGGAA 58.516 47.619 0.00 0.00 0.00 3.36
1821 5569 0.951040 CTGTTGCGACCTCTGAACCC 60.951 60.000 0.45 0.00 0.00 4.11
1971 5722 5.464389 AGCATTTCGACGTTTACTTGTAAGT 59.536 36.000 2.51 2.51 42.91 2.24
1973 5724 6.299266 GCATTTCGACGTTTACTTGTAAGTTC 59.701 38.462 2.20 0.00 40.37 3.01
2006 5780 4.466370 TCACTATCTACTTGTCCCTGGTTG 59.534 45.833 0.00 0.00 0.00 3.77
2028 5802 5.331902 TGTTCTCAACTTTTGCTCTTTTCG 58.668 37.500 0.00 0.00 0.00 3.46
2285 6505 3.999001 CAGTTCAGCACTGCTCTAAATGA 59.001 43.478 13.96 1.84 46.70 2.57
2354 6588 3.913163 AGGAAGTCCTGATCCTGAAACTT 59.087 43.478 0.00 0.00 46.55 2.66
2409 6643 2.918712 ATGGAGGTTCGCTATCTTGG 57.081 50.000 0.00 0.00 0.00 3.61
2644 7338 6.500336 ACAAGAGGACTCTGTAACCCTATTA 58.500 40.000 2.05 0.00 40.36 0.98
2842 8853 0.961019 TGGCTCACATTTCTGTTGCC 59.039 50.000 10.72 10.72 45.53 4.52
2855 8866 1.008538 GTTGCCTGTTGAACAGCCG 60.009 57.895 19.45 8.38 44.63 5.52
2885 8896 1.744320 AAGGCCAACAAAGTTCCGGC 61.744 55.000 5.01 3.41 42.21 6.13
2899 8910 2.747855 CGGCCTGGACCTGAAAGC 60.748 66.667 0.00 0.00 0.00 3.51
2946 8957 1.726791 CGTCAGGAGTTCAAACCGATG 59.273 52.381 0.00 0.00 0.00 3.84
3127 9663 2.195922 CATGATGTGAATCAGCGTCGA 58.804 47.619 0.00 0.00 34.90 4.20
3190 9726 9.751542 CATCTTCCGTTATTATCAGAAACTAGT 57.248 33.333 0.00 0.00 0.00 2.57
3209 9745 2.027469 AGTTTAGTTTAGGGGGTCAGCG 60.027 50.000 0.00 0.00 0.00 5.18
3210 9746 1.941377 TTAGTTTAGGGGGTCAGCGA 58.059 50.000 0.00 0.00 0.00 4.93
3215 9751 0.988832 TTAGGGGGTCAGCGACATTT 59.011 50.000 10.14 0.00 33.68 2.32
3260 9796 2.224744 TGCTGGAAATGAGCACCTACAA 60.225 45.455 0.00 0.00 41.56 2.41
3293 9829 5.125100 TCATTGGCATTCTTCACTTGTTC 57.875 39.130 0.00 0.00 0.00 3.18
3296 9832 2.290367 TGGCATTCTTCACTTGTTCACG 59.710 45.455 0.00 0.00 0.00 4.35
3311 9847 0.970427 TCACGCATCCCTACTGCTGA 60.970 55.000 0.00 0.00 37.48 4.26
3314 9850 1.227793 GCATCCCTACTGCTGAGGC 60.228 63.158 0.00 0.00 36.68 4.70
3350 9886 8.044060 TCTAATGTTAATCCAAGAAAGCACAG 57.956 34.615 0.00 0.00 0.00 3.66
3369 9905 1.024579 GCCGGTTAGTGTGGTCATGG 61.025 60.000 1.90 0.00 0.00 3.66
3389 9925 1.265236 GATGGTGGGCAAAATGGTCA 58.735 50.000 0.00 0.00 0.00 4.02
3392 9928 1.622811 TGGTGGGCAAAATGGTCATTC 59.377 47.619 0.00 0.00 0.00 2.67
3395 9931 1.901159 TGGGCAAAATGGTCATTCCTG 59.099 47.619 0.00 0.23 37.07 3.86
3397 9933 1.405933 GGCAAAATGGTCATTCCTGCC 60.406 52.381 22.60 22.60 44.84 4.85
3402 9938 2.431954 ATGGTCATTCCTGCCTGAAG 57.568 50.000 0.00 0.00 37.07 3.02
3404 9940 1.918262 TGGTCATTCCTGCCTGAAGAT 59.082 47.619 0.00 0.00 37.07 2.40
3405 9941 2.309755 TGGTCATTCCTGCCTGAAGATT 59.690 45.455 0.00 0.00 37.07 2.40
3407 9943 3.766051 GGTCATTCCTGCCTGAAGATTTT 59.234 43.478 0.00 0.00 0.00 1.82
3419 9965 8.121305 TGCCTGAAGATTTTTATAGAAAGCAA 57.879 30.769 6.75 0.00 0.00 3.91
3421 9967 9.080915 GCCTGAAGATTTTTATAGAAAGCAAAG 57.919 33.333 6.75 1.70 0.00 2.77
3435 9981 5.358725 AGAAAGCAAAGGTTAGAAAACGGAA 59.641 36.000 0.00 0.00 36.39 4.30
3440 9986 3.055209 AGGTTAGAAAACGGAAGAGGC 57.945 47.619 0.00 0.00 36.39 4.70
3441 9987 2.370849 AGGTTAGAAAACGGAAGAGGCA 59.629 45.455 0.00 0.00 36.39 4.75
3454 10000 4.515567 CGGAAGAGGCAAAATACTAATCCC 59.484 45.833 0.00 0.00 0.00 3.85
3462 10009 6.095021 AGGCAAAATACTAATCCCTTCGTTTC 59.905 38.462 0.00 0.00 0.00 2.78
3488 10135 3.810310 ATTCCTAGAAGAGAACGCCTG 57.190 47.619 0.00 0.00 0.00 4.85
3493 10140 5.443283 TCCTAGAAGAGAACGCCTGTATAA 58.557 41.667 0.00 0.00 0.00 0.98
3501 10148 9.651718 GAAGAGAACGCCTGTATAATTATTTTG 57.348 33.333 2.68 0.00 0.00 2.44
3545 10192 1.205417 CCTTTGCATCATTGTGACCCC 59.795 52.381 0.00 0.00 0.00 4.95
3573 10220 6.636454 AAAATTGGACTGGTACATAGGAGA 57.364 37.500 0.00 0.00 38.20 3.71
3574 10221 6.636454 AAATTGGACTGGTACATAGGAGAA 57.364 37.500 0.00 0.00 38.20 2.87
3652 10299 7.370383 ACATTTGAAGCTAATGTTACACAAGG 58.630 34.615 7.40 0.00 42.02 3.61
3653 10300 5.371115 TTGAAGCTAATGTTACACAAGGC 57.629 39.130 0.00 0.00 0.00 4.35
3654 10301 3.435327 TGAAGCTAATGTTACACAAGGCG 59.565 43.478 0.00 0.00 0.00 5.52
3655 10302 3.328382 AGCTAATGTTACACAAGGCGA 57.672 42.857 0.00 0.00 0.00 5.54
3656 10303 3.000727 AGCTAATGTTACACAAGGCGAC 58.999 45.455 0.00 0.00 0.00 5.19
3669 10316 0.533032 AGGCGACTTAGAGCAACTCC 59.467 55.000 0.00 0.00 37.44 3.85
3670 10317 0.246635 GGCGACTTAGAGCAACTCCA 59.753 55.000 6.75 0.00 34.54 3.86
3672 10319 1.727335 GCGACTTAGAGCAACTCCAAC 59.273 52.381 0.00 0.00 0.00 3.77
3673 10320 1.986378 CGACTTAGAGCAACTCCAACG 59.014 52.381 0.00 0.00 0.00 4.10
3674 10321 2.338500 GACTTAGAGCAACTCCAACGG 58.662 52.381 0.00 0.00 0.00 4.44
3675 10322 1.002087 ACTTAGAGCAACTCCAACGGG 59.998 52.381 0.00 0.00 0.00 5.28
3677 10324 2.180159 TAGAGCAACTCCAACGGGCC 62.180 60.000 0.00 0.00 0.00 5.80
3680 10327 3.047877 CAACTCCAACGGGCCGAC 61.048 66.667 35.78 0.00 0.00 4.79
3681 10328 4.324991 AACTCCAACGGGCCGACC 62.325 66.667 35.78 0.00 0.00 4.79
3692 10339 2.046285 GGCCGACCCAAATGGACAG 61.046 63.158 0.00 0.00 37.39 3.51
3693 10340 2.700773 GCCGACCCAAATGGACAGC 61.701 63.158 0.00 0.00 37.39 4.40
3694 10341 2.398554 CCGACCCAAATGGACAGCG 61.399 63.158 0.00 0.00 37.39 5.18
3695 10342 1.375396 CGACCCAAATGGACAGCGA 60.375 57.895 0.00 0.00 37.39 4.93
3697 10344 1.463674 GACCCAAATGGACAGCGATT 58.536 50.000 0.00 0.00 37.39 3.34
3698 10345 1.818674 GACCCAAATGGACAGCGATTT 59.181 47.619 0.00 0.00 37.39 2.17
3700 10347 2.029110 ACCCAAATGGACAGCGATTTTG 60.029 45.455 0.00 0.00 37.39 2.44
3701 10348 2.029110 CCCAAATGGACAGCGATTTTGT 60.029 45.455 0.00 0.00 37.39 2.83
3702 10349 3.244976 CCAAATGGACAGCGATTTTGTC 58.755 45.455 0.00 0.00 43.25 3.18
3707 10354 2.681152 GACAGCGATTTTGTCCGTTT 57.319 45.000 0.00 0.00 39.17 3.60
3709 10356 1.001815 ACAGCGATTTTGTCCGTTTGG 60.002 47.619 0.00 0.00 0.00 3.28
3711 10358 0.312729 GCGATTTTGTCCGTTTGGGT 59.687 50.000 0.00 0.00 37.00 4.51
3712 10359 1.664874 GCGATTTTGTCCGTTTGGGTC 60.665 52.381 0.00 0.00 37.00 4.46
3713 10360 1.604755 CGATTTTGTCCGTTTGGGTCA 59.395 47.619 0.00 0.00 37.00 4.02
3714 10361 2.350388 CGATTTTGTCCGTTTGGGTCAG 60.350 50.000 0.00 0.00 35.24 3.51
3715 10362 0.741915 TTTTGTCCGTTTGGGTCAGC 59.258 50.000 0.00 0.00 35.24 4.26
3716 10363 0.394488 TTTGTCCGTTTGGGTCAGCA 60.394 50.000 0.00 0.00 35.24 4.41
3717 10364 0.394488 TTGTCCGTTTGGGTCAGCAA 60.394 50.000 0.00 0.00 35.24 3.91
3718 10365 0.817634 TGTCCGTTTGGGTCAGCAAG 60.818 55.000 0.00 0.00 37.00 4.01
3719 10366 1.228124 TCCGTTTGGGTCAGCAAGG 60.228 57.895 0.00 0.00 37.00 3.61
3720 10367 2.644992 CGTTTGGGTCAGCAAGGC 59.355 61.111 0.00 0.00 0.00 4.35
3721 10368 2.644992 GTTTGGGTCAGCAAGGCG 59.355 61.111 0.00 0.00 0.00 5.52
3722 10369 2.597217 TTTGGGTCAGCAAGGCGG 60.597 61.111 0.00 0.00 0.00 6.13
3728 10375 3.611674 TCAGCAAGGCGGACACGA 61.612 61.111 0.00 0.00 44.60 4.35
3729 10376 2.664851 CAGCAAGGCGGACACGAA 60.665 61.111 0.00 0.00 44.60 3.85
3731 10378 2.034879 AGCAAGGCGGACACGAATG 61.035 57.895 0.00 0.00 44.60 2.67
3732 10379 2.325082 GCAAGGCGGACACGAATGT 61.325 57.895 0.00 0.00 44.60 2.71
3741 10388 1.736645 ACACGAATGTCCGCTTCCG 60.737 57.895 0.00 0.00 31.55 4.30
3742 10389 2.813908 ACGAATGTCCGCTTCCGC 60.814 61.111 0.00 0.00 0.00 5.54
3759 10406 3.723172 CGATTGGGTCGGCTCATG 58.277 61.111 0.00 0.00 46.47 3.07
3760 10407 2.537560 CGATTGGGTCGGCTCATGC 61.538 63.158 0.00 0.00 46.47 4.06
3761 10408 2.514592 ATTGGGTCGGCTCATGCG 60.515 61.111 0.00 0.00 40.82 4.73
3790 11249 2.478746 CGCCGACCCATTTTGACG 59.521 61.111 0.00 0.00 0.00 4.35
3791 11250 2.874751 GCCGACCCATTTTGACGG 59.125 61.111 0.00 0.00 45.26 4.79
3792 11251 2.874751 CCGACCCATTTTGACGGC 59.125 61.111 0.00 0.00 37.32 5.68
3793 11252 1.969064 CCGACCCATTTTGACGGCA 60.969 57.895 0.00 0.00 37.32 5.69
3794 11253 1.209127 CGACCCATTTTGACGGCAC 59.791 57.895 0.00 0.00 0.00 5.01
3857 11316 9.965748 CAACATTTAATTAAACATTAAAGCCGG 57.034 29.630 12.74 0.00 37.04 6.13
3858 11317 8.192068 ACATTTAATTAAACATTAAAGCCGGC 57.808 30.769 21.89 21.89 37.04 6.13
3859 11318 7.279090 ACATTTAATTAAACATTAAAGCCGGCC 59.721 33.333 26.15 5.07 37.04 6.13
3860 11319 4.810191 AATTAAACATTAAAGCCGGCCA 57.190 36.364 26.15 5.71 0.00 5.36
3861 11320 3.579335 TTAAACATTAAAGCCGGCCAC 57.421 42.857 26.15 0.00 0.00 5.01
3862 11321 0.242555 AAACATTAAAGCCGGCCACG 59.757 50.000 26.15 8.66 40.55 4.94
3863 11322 0.606944 AACATTAAAGCCGGCCACGA 60.607 50.000 26.15 7.86 44.60 4.35
3864 11323 0.606944 ACATTAAAGCCGGCCACGAA 60.607 50.000 26.15 13.16 44.60 3.85
3865 11324 0.098728 CATTAAAGCCGGCCACGAAG 59.901 55.000 26.15 5.89 44.60 3.79
3866 11325 1.029947 ATTAAAGCCGGCCACGAAGG 61.030 55.000 26.15 0.00 44.60 3.46
3913 11372 3.047877 CGTCGCCCCAAACCAGAC 61.048 66.667 0.00 0.00 0.00 3.51
3914 11373 2.671963 GTCGCCCCAAACCAGACC 60.672 66.667 0.00 0.00 0.00 3.85
3915 11374 4.323477 TCGCCCCAAACCAGACCG 62.323 66.667 0.00 0.00 0.00 4.79
3939 11570 4.363990 CGCTGACCCACTCGCACT 62.364 66.667 0.00 0.00 0.00 4.40
3942 11573 1.595993 GCTGACCCACTCGCACTCTA 61.596 60.000 0.00 0.00 0.00 2.43
3950 11581 1.025647 ACTCGCACTCTACTCCCGTC 61.026 60.000 0.00 0.00 0.00 4.79
3953 11584 1.810532 GCACTCTACTCCCGTCCAG 59.189 63.158 0.00 0.00 0.00 3.86
3961 11592 2.439701 TCCCGTCCAGGAGTAGCG 60.440 66.667 0.00 0.00 45.00 4.26
3962 11593 4.208686 CCCGTCCAGGAGTAGCGC 62.209 72.222 0.00 0.00 45.00 5.92
3963 11594 3.141488 CCGTCCAGGAGTAGCGCT 61.141 66.667 17.26 17.26 45.00 5.92
3964 11595 2.409651 CGTCCAGGAGTAGCGCTC 59.590 66.667 16.34 5.88 43.39 5.03
3965 11596 2.409651 GTCCAGGAGTAGCGCTCG 59.590 66.667 16.34 0.00 45.03 5.03
3966 11597 2.113433 GTCCAGGAGTAGCGCTCGA 61.113 63.158 16.34 0.00 45.03 4.04
3967 11598 1.152943 TCCAGGAGTAGCGCTCGAT 60.153 57.895 16.34 0.00 45.03 3.59
3970 11601 2.196925 AGGAGTAGCGCTCGATGGG 61.197 63.158 16.34 0.00 45.03 4.00
3971 11602 2.336809 GAGTAGCGCTCGATGGGG 59.663 66.667 16.34 0.00 34.13 4.96
3972 11603 3.214250 GAGTAGCGCTCGATGGGGG 62.214 68.421 16.34 0.00 34.13 5.40
3973 11604 3.224324 GTAGCGCTCGATGGGGGA 61.224 66.667 16.34 0.00 0.00 4.81
3974 11605 3.224324 TAGCGCTCGATGGGGGAC 61.224 66.667 16.34 0.00 0.00 4.46
3976 11607 4.899239 GCGCTCGATGGGGGACAG 62.899 72.222 0.00 0.00 0.00 3.51
3977 11608 4.899239 CGCTCGATGGGGGACAGC 62.899 72.222 0.00 0.00 0.00 4.40
3978 11609 3.474570 GCTCGATGGGGGACAGCT 61.475 66.667 0.00 0.00 32.00 4.24
3979 11610 3.036429 GCTCGATGGGGGACAGCTT 62.036 63.158 0.00 0.00 32.00 3.74
3981 11612 2.202932 CGATGGGGGACAGCTTCG 60.203 66.667 0.00 0.00 32.00 3.79
3982 11613 2.190578 GATGGGGGACAGCTTCGG 59.809 66.667 0.00 0.00 31.33 4.30
4002 11633 3.550656 CCGACTCGGCTTTGACAC 58.449 61.111 4.10 0.00 41.17 3.67
4003 11634 2.372690 CCGACTCGGCTTTGACACG 61.373 63.158 4.10 0.00 41.17 4.49
4005 11636 2.027625 GACTCGGCTTTGACACGGG 61.028 63.158 0.00 0.00 0.00 5.28
4006 11637 2.342279 CTCGGCTTTGACACGGGA 59.658 61.111 0.00 0.00 0.00 5.14
4007 11638 1.079127 CTCGGCTTTGACACGGGAT 60.079 57.895 0.00 0.00 0.00 3.85
4008 11639 1.361668 CTCGGCTTTGACACGGGATG 61.362 60.000 0.00 0.00 0.00 3.51
4009 11640 2.398554 CGGCTTTGACACGGGATGG 61.399 63.158 0.00 0.00 0.00 3.51
4010 11641 2.700773 GGCTTTGACACGGGATGGC 61.701 63.158 0.00 0.00 36.53 4.40
4012 11643 2.359354 TTTGACACGGGATGGCGG 60.359 61.111 0.00 0.00 40.51 6.13
4013 11644 3.910914 TTTGACACGGGATGGCGGG 62.911 63.158 0.00 0.00 40.51 6.13
4018 11649 4.404098 ACGGGATGGCGGGTGAAC 62.404 66.667 0.00 0.00 0.00 3.18
4070 11701 4.164258 GCCATGGCCACCTCATAC 57.836 61.111 27.24 0.00 34.56 2.39
4071 11702 1.893808 GCCATGGCCACCTCATACG 60.894 63.158 27.24 0.00 34.56 3.06
4072 11703 1.893808 CCATGGCCACCTCATACGC 60.894 63.158 8.16 0.00 0.00 4.42
4073 11704 1.893808 CATGGCCACCTCATACGCC 60.894 63.158 8.16 0.00 41.99 5.68
4074 11705 3.460672 ATGGCCACCTCATACGCCG 62.461 63.158 8.16 0.00 44.71 6.46
4078 11709 2.279517 CACCTCATACGCCGCCTC 60.280 66.667 0.00 0.00 0.00 4.70
4081 11712 2.336809 CTCATACGCCGCCTCCTC 59.663 66.667 0.00 0.00 0.00 3.71
4082 11713 2.123854 TCATACGCCGCCTCCTCT 60.124 61.111 0.00 0.00 0.00 3.69
4084 11715 1.300233 CATACGCCGCCTCCTCTTC 60.300 63.158 0.00 0.00 0.00 2.87
4086 11717 2.930777 ATACGCCGCCTCCTCTTCCT 62.931 60.000 0.00 0.00 0.00 3.36
4087 11718 4.214327 CGCCGCCTCCTCTTCCTC 62.214 72.222 0.00 0.00 0.00 3.71
4088 11719 3.077556 GCCGCCTCCTCTTCCTCA 61.078 66.667 0.00 0.00 0.00 3.86
4089 11720 2.660064 GCCGCCTCCTCTTCCTCAA 61.660 63.158 0.00 0.00 0.00 3.02
4091 11722 1.219393 CGCCTCCTCTTCCTCAACC 59.781 63.158 0.00 0.00 0.00 3.77
4092 11723 1.219393 GCCTCCTCTTCCTCAACCG 59.781 63.158 0.00 0.00 0.00 4.44
4093 11724 1.219393 CCTCCTCTTCCTCAACCGC 59.781 63.158 0.00 0.00 0.00 5.68
4094 11725 1.219393 CTCCTCTTCCTCAACCGCC 59.781 63.158 0.00 0.00 0.00 6.13
4095 11726 2.125512 CCTCTTCCTCAACCGCCG 60.126 66.667 0.00 0.00 0.00 6.46
4096 11727 2.815647 CTCTTCCTCAACCGCCGC 60.816 66.667 0.00 0.00 0.00 6.53
4097 11728 4.388499 TCTTCCTCAACCGCCGCC 62.388 66.667 0.00 0.00 0.00 6.13
4117 11748 4.803426 CCTGTGCCGCTCGTCCTC 62.803 72.222 0.00 0.00 0.00 3.71
4118 11749 4.803426 CTGTGCCGCTCGTCCTCC 62.803 72.222 0.00 0.00 0.00 4.30
4124 11755 4.244802 CGCTCGTCCTCCTCGCTC 62.245 72.222 0.00 0.00 0.00 5.03
4125 11756 2.826738 GCTCGTCCTCCTCGCTCT 60.827 66.667 0.00 0.00 0.00 4.09
4126 11757 2.830285 GCTCGTCCTCCTCGCTCTC 61.830 68.421 0.00 0.00 0.00 3.20
4127 11758 2.124653 TCGTCCTCCTCGCTCTCC 60.125 66.667 0.00 0.00 0.00 3.71
4128 11759 3.213402 CGTCCTCCTCGCTCTCCC 61.213 72.222 0.00 0.00 0.00 4.30
4129 11760 3.213402 GTCCTCCTCGCTCTCCCG 61.213 72.222 0.00 0.00 0.00 5.14
4156 11787 3.399181 CGCAAGGGCCTCCTGGTA 61.399 66.667 6.46 0.00 44.07 3.25
4157 11788 2.592308 GCAAGGGCCTCCTGGTAG 59.408 66.667 6.46 0.00 44.07 3.18
4158 11789 3.049080 GCAAGGGCCTCCTGGTAGG 62.049 68.421 6.46 7.57 44.07 3.18
4182 12896 4.787280 CCGCCTCCTGGTCCTCCT 62.787 72.222 0.00 0.00 35.27 3.69
4183 12897 3.151022 CGCCTCCTGGTCCTCCTC 61.151 72.222 0.00 0.00 35.27 3.71
4184 12898 3.151022 GCCTCCTGGTCCTCCTCG 61.151 72.222 0.00 0.00 35.27 4.63
4185 12899 3.151022 CCTCCTGGTCCTCCTCGC 61.151 72.222 0.00 0.00 34.23 5.03
4186 12900 3.522731 CTCCTGGTCCTCCTCGCG 61.523 72.222 0.00 0.00 34.23 5.87
4192 12906 4.176851 GTCCTCCTCGCGGACGAC 62.177 72.222 6.13 7.65 45.12 4.34
4222 12936 2.661866 GCACGGTGCAGTCGACTT 60.662 61.111 27.10 0.00 44.26 3.01
4223 12937 2.658707 GCACGGTGCAGTCGACTTC 61.659 63.158 27.10 12.51 44.26 3.01
4225 12939 3.470567 CGGTGCAGTCGACTTCGC 61.471 66.667 17.26 18.10 39.60 4.70
4229 12943 2.014554 TGCAGTCGACTTCGCGAAC 61.015 57.895 19.38 8.81 42.55 3.95
4234 12948 4.117372 CGACTTCGCGAACGCCAC 62.117 66.667 19.38 6.68 39.84 5.01
4235 12949 4.117372 GACTTCGCGAACGCCACG 62.117 66.667 19.38 9.80 39.84 4.94
4237 12951 4.117372 CTTCGCGAACGCCACGTC 62.117 66.667 19.38 0.00 39.99 4.34
4256 12970 4.200283 CCTCGCCTCCTCGTGCTC 62.200 72.222 0.00 0.00 0.00 4.26
4257 12971 4.544689 CTCGCCTCCTCGTGCTCG 62.545 72.222 0.81 0.81 38.55 5.03
4259 12973 4.116328 CGCCTCCTCGTGCTCGAA 62.116 66.667 12.41 0.00 45.61 3.71
4260 12974 2.202676 GCCTCCTCGTGCTCGAAG 60.203 66.667 12.41 6.38 45.61 3.79
4261 12975 2.492090 CCTCCTCGTGCTCGAAGG 59.508 66.667 12.41 12.71 45.61 3.46
4263 12977 1.431440 CTCCTCGTGCTCGAAGGAG 59.569 63.158 26.78 26.78 45.18 3.69
4264 12978 1.002502 TCCTCGTGCTCGAAGGAGA 60.003 57.895 18.83 9.39 45.61 3.71
4265 12979 0.608308 TCCTCGTGCTCGAAGGAGAA 60.608 55.000 18.83 4.70 45.61 2.87
4266 12980 0.456995 CCTCGTGCTCGAAGGAGAAC 60.457 60.000 12.41 0.00 44.29 3.01
4267 12981 0.456995 CTCGTGCTCGAAGGAGAACC 60.457 60.000 12.41 0.00 44.83 3.62
4270 12984 1.016653 GTGCTCGAAGGAGAACCAGC 61.017 60.000 0.00 0.00 42.26 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.079750 GTCACTCGGACAGCCCTTC 60.080 63.158 0.00 0.00 46.19 3.46
9 10 1.254026 AACTCGAATGGTCACTCGGA 58.746 50.000 2.08 0.00 35.76 4.55
10 11 1.993370 GAAACTCGAATGGTCACTCGG 59.007 52.381 2.08 0.00 35.76 4.63
11 12 1.649171 CGAAACTCGAATGGTCACTCG 59.351 52.381 0.00 0.00 43.74 4.18
12 13 2.942710 TCGAAACTCGAATGGTCACTC 58.057 47.619 0.00 0.00 46.90 3.51
23 24 0.108756 GGGAGGACCTTCGAAACTCG 60.109 60.000 0.00 0.00 37.49 4.18
24 25 0.108756 CGGGAGGACCTTCGAAACTC 60.109 60.000 11.36 4.93 36.97 3.01
25 26 0.541296 TCGGGAGGACCTTCGAAACT 60.541 55.000 15.55 0.00 36.97 2.66
26 27 0.319405 TTCGGGAGGACCTTCGAAAC 59.681 55.000 22.82 0.01 37.08 2.78
27 28 0.606604 CTTCGGGAGGACCTTCGAAA 59.393 55.000 24.14 9.26 38.57 3.46
29 30 4.013702 CTTCGGGAGGACCTTCGA 57.986 61.111 14.37 14.37 36.97 3.71
43 44 4.373116 TGTCGCGGACAGCCCTTC 62.373 66.667 6.13 0.00 44.76 3.46
44 45 4.681978 GTGTCGCGGACAGCCCTT 62.682 66.667 6.13 0.00 43.57 3.95
73 74 4.796231 CGGGAGGCGGTCGAACAG 62.796 72.222 0.00 0.00 0.00 3.16
88 89 3.465403 CCTCAGACAGCCCTCCGG 61.465 72.222 0.00 0.00 0.00 5.14
89 90 2.363018 TCCTCAGACAGCCCTCCG 60.363 66.667 0.00 0.00 0.00 4.63
90 91 2.730524 GCTCCTCAGACAGCCCTCC 61.731 68.421 0.00 0.00 0.00 4.30
91 92 1.958902 CTGCTCCTCAGACAGCCCTC 61.959 65.000 0.00 0.00 45.72 4.30
92 93 1.988956 CTGCTCCTCAGACAGCCCT 60.989 63.158 0.00 0.00 45.72 5.19
94 95 3.705502 TCTGCTCCTCAGACAGCC 58.294 61.111 0.00 0.00 46.34 4.85
100 101 2.079170 TACCCTCATCTGCTCCTCAG 57.921 55.000 0.00 0.00 44.21 3.35
101 102 2.783379 ATACCCTCATCTGCTCCTCA 57.217 50.000 0.00 0.00 0.00 3.86
102 103 3.501349 TGTATACCCTCATCTGCTCCTC 58.499 50.000 0.00 0.00 0.00 3.71
103 104 3.619900 TGTATACCCTCATCTGCTCCT 57.380 47.619 0.00 0.00 0.00 3.69
104 105 3.196685 GGATGTATACCCTCATCTGCTCC 59.803 52.174 0.00 0.00 39.93 4.70
107 108 4.464069 GAGGATGTATACCCTCATCTGC 57.536 50.000 18.33 2.39 46.28 4.26
126 127 2.162338 TACAACCTCCCAACCGCGAG 62.162 60.000 8.23 0.00 0.00 5.03
127 128 1.756408 TTACAACCTCCCAACCGCGA 61.756 55.000 8.23 0.00 0.00 5.87
128 129 0.885596 TTTACAACCTCCCAACCGCG 60.886 55.000 0.00 0.00 0.00 6.46
129 130 1.471287 GATTTACAACCTCCCAACCGC 59.529 52.381 0.00 0.00 0.00 5.68
130 131 2.089201 GGATTTACAACCTCCCAACCG 58.911 52.381 0.00 0.00 0.00 4.44
132 133 3.945921 GCTAGGATTTACAACCTCCCAAC 59.054 47.826 0.00 0.00 37.68 3.77
133 134 3.850173 AGCTAGGATTTACAACCTCCCAA 59.150 43.478 0.00 0.00 37.68 4.12
135 136 3.809905 CAGCTAGGATTTACAACCTCCC 58.190 50.000 0.00 0.00 37.68 4.30
136 137 3.206964 GCAGCTAGGATTTACAACCTCC 58.793 50.000 0.00 0.00 37.68 4.30
137 138 2.866762 CGCAGCTAGGATTTACAACCTC 59.133 50.000 0.00 0.00 37.68 3.85
138 139 2.420129 CCGCAGCTAGGATTTACAACCT 60.420 50.000 1.34 0.00 39.95 3.50
139 140 1.940613 CCGCAGCTAGGATTTACAACC 59.059 52.381 1.34 0.00 0.00 3.77
140 141 1.940613 CCCGCAGCTAGGATTTACAAC 59.059 52.381 8.84 0.00 0.00 3.32
144 145 1.623811 GATCCCCGCAGCTAGGATTTA 59.376 52.381 12.97 0.00 40.54 1.40
145 146 0.398318 GATCCCCGCAGCTAGGATTT 59.602 55.000 12.97 0.00 40.54 2.17
147 148 1.157276 AGATCCCCGCAGCTAGGAT 59.843 57.895 11.86 11.86 43.18 3.24
148 149 1.834378 CAGATCCCCGCAGCTAGGA 60.834 63.158 8.84 2.90 0.00 2.94
149 150 2.739784 CAGATCCCCGCAGCTAGG 59.260 66.667 0.61 0.61 0.00 3.02
151 152 2.763710 TGCAGATCCCCGCAGCTA 60.764 61.111 0.00 0.00 33.34 3.32
152 153 4.479993 GTGCAGATCCCCGCAGCT 62.480 66.667 2.52 0.00 39.20 4.24
163 164 4.492160 GACGATCGGCGGTGCAGA 62.492 66.667 20.98 0.00 46.49 4.26
164 165 4.794439 TGACGATCGGCGGTGCAG 62.794 66.667 20.98 0.00 46.49 4.41
165 166 4.141965 ATGACGATCGGCGGTGCA 62.142 61.111 20.98 0.00 46.49 4.57
166 167 3.330853 GATGACGATCGGCGGTGC 61.331 66.667 20.98 3.12 46.49 5.01
167 168 3.024609 CGATGACGATCGGCGGTG 61.025 66.667 20.98 5.87 46.51 4.94
168 169 3.465296 GTCGATGACGATCGGCGGT 62.465 63.158 20.98 9.46 46.06 5.68
169 170 2.726180 GTCGATGACGATCGGCGG 60.726 66.667 20.98 10.12 46.06 6.13
176 177 2.286872 GGGAAGTAGAGTCGATGACGA 58.713 52.381 0.00 0.00 46.56 4.20
177 178 1.003759 CGGGAAGTAGAGTCGATGACG 60.004 57.143 0.00 0.00 37.67 4.35
178 179 1.268640 GCGGGAAGTAGAGTCGATGAC 60.269 57.143 0.00 0.00 0.00 3.06
179 180 1.022735 GCGGGAAGTAGAGTCGATGA 58.977 55.000 0.00 0.00 0.00 2.92
180 181 1.025812 AGCGGGAAGTAGAGTCGATG 58.974 55.000 0.00 0.00 0.00 3.84
181 182 2.220313 GTAGCGGGAAGTAGAGTCGAT 58.780 52.381 0.00 0.00 0.00 3.59
182 183 1.661341 GTAGCGGGAAGTAGAGTCGA 58.339 55.000 0.00 0.00 0.00 4.20
183 184 0.304098 CGTAGCGGGAAGTAGAGTCG 59.696 60.000 0.00 0.00 0.00 4.18
201 202 0.095245 TTCGTTACCGACTCGTAGCG 59.905 55.000 0.00 4.73 44.13 4.26
202 203 2.247311 TTTCGTTACCGACTCGTAGC 57.753 50.000 0.00 0.00 44.13 3.58
203 204 4.466828 TCTTTTTCGTTACCGACTCGTAG 58.533 43.478 0.00 0.00 44.13 3.51
205 206 3.354089 TCTTTTTCGTTACCGACTCGT 57.646 42.857 0.00 0.00 44.13 4.18
207 208 5.834239 TTGATCTTTTTCGTTACCGACTC 57.166 39.130 0.00 0.00 44.13 3.36
209 210 5.142265 GGTTTGATCTTTTTCGTTACCGAC 58.858 41.667 0.00 0.00 44.13 4.79
211 212 5.098218 TGGTTTGATCTTTTTCGTTACCG 57.902 39.130 0.00 0.00 0.00 4.02
213 214 9.061610 CATACATGGTTTGATCTTTTTCGTTAC 57.938 33.333 0.00 0.00 0.00 2.50
214 215 7.753132 GCATACATGGTTTGATCTTTTTCGTTA 59.247 33.333 0.00 0.00 0.00 3.18
215 216 6.586082 GCATACATGGTTTGATCTTTTTCGTT 59.414 34.615 0.00 0.00 0.00 3.85
216 217 6.092748 GCATACATGGTTTGATCTTTTTCGT 58.907 36.000 0.00 0.00 0.00 3.85
217 218 6.092092 TGCATACATGGTTTGATCTTTTTCG 58.908 36.000 0.00 0.00 0.00 3.46
218 219 7.092716 ACTGCATACATGGTTTGATCTTTTTC 58.907 34.615 0.00 0.00 0.00 2.29
220 221 6.435277 AGACTGCATACATGGTTTGATCTTTT 59.565 34.615 0.00 0.00 0.00 2.27
221 222 5.948162 AGACTGCATACATGGTTTGATCTTT 59.052 36.000 0.00 0.00 0.00 2.52
223 224 5.108187 AGACTGCATACATGGTTTGATCT 57.892 39.130 0.00 0.00 0.00 2.75
224 225 4.274459 GGAGACTGCATACATGGTTTGATC 59.726 45.833 0.00 0.00 0.00 2.92
227 228 3.346315 TGGAGACTGCATACATGGTTTG 58.654 45.455 0.00 0.00 0.00 2.93
228 229 3.719268 TGGAGACTGCATACATGGTTT 57.281 42.857 0.00 0.00 0.00 3.27
229 230 3.939740 ATGGAGACTGCATACATGGTT 57.060 42.857 7.82 0.00 0.00 3.67
230 231 3.969976 ACTATGGAGACTGCATACATGGT 59.030 43.478 12.24 6.67 29.08 3.55
231 232 4.313282 CACTATGGAGACTGCATACATGG 58.687 47.826 12.24 6.09 29.08 3.66
234 235 3.374764 ACCACTATGGAGACTGCATACA 58.625 45.455 12.24 0.00 40.96 2.29
235 236 3.243907 GGACCACTATGGAGACTGCATAC 60.244 52.174 12.24 3.29 40.96 2.39
236 237 2.965831 GGACCACTATGGAGACTGCATA 59.034 50.000 15.06 15.06 40.96 3.14
238 239 1.195115 GGACCACTATGGAGACTGCA 58.805 55.000 0.00 0.00 40.96 4.41
239 240 1.137872 CAGGACCACTATGGAGACTGC 59.862 57.143 0.84 0.00 40.96 4.40
240 241 1.759445 CCAGGACCACTATGGAGACTG 59.241 57.143 0.84 6.55 40.96 3.51
241 242 1.343478 CCCAGGACCACTATGGAGACT 60.343 57.143 0.84 0.00 40.96 3.24
242 243 1.123928 CCCAGGACCACTATGGAGAC 58.876 60.000 0.84 0.00 40.96 3.36
243 244 0.691078 GCCCAGGACCACTATGGAGA 60.691 60.000 0.84 0.00 40.96 3.71
244 245 0.692419 AGCCCAGGACCACTATGGAG 60.692 60.000 0.84 0.00 40.96 3.86
245 246 0.982852 CAGCCCAGGACCACTATGGA 60.983 60.000 0.84 0.00 40.96 3.41
246 247 1.528824 CAGCCCAGGACCACTATGG 59.471 63.158 0.00 0.00 45.02 2.74
247 248 1.274703 ACCAGCCCAGGACCACTATG 61.275 60.000 0.00 0.00 0.00 2.23
248 249 1.082954 ACCAGCCCAGGACCACTAT 59.917 57.895 0.00 0.00 0.00 2.12
249 250 1.918293 CACCAGCCCAGGACCACTA 60.918 63.158 0.00 0.00 0.00 2.74
254 255 3.665675 CTACGCACCAGCCCAGGAC 62.666 68.421 0.00 0.00 37.52 3.85
255 256 3.390521 CTACGCACCAGCCCAGGA 61.391 66.667 0.00 0.00 37.52 3.86
256 257 4.473520 CCTACGCACCAGCCCAGG 62.474 72.222 0.00 0.00 37.52 4.45
257 258 3.665675 GACCTACGCACCAGCCCAG 62.666 68.421 0.00 0.00 37.52 4.45
258 259 3.702048 GACCTACGCACCAGCCCA 61.702 66.667 0.00 0.00 37.52 5.36
259 260 4.814294 CGACCTACGCACCAGCCC 62.814 72.222 0.00 0.00 37.52 5.19
260 261 4.814294 CCGACCTACGCACCAGCC 62.814 72.222 0.00 0.00 41.07 4.85
261 262 2.775032 TTTCCGACCTACGCACCAGC 62.775 60.000 0.00 0.00 41.07 4.85
262 263 0.108329 ATTTCCGACCTACGCACCAG 60.108 55.000 0.00 0.00 41.07 4.00
263 264 0.322322 AATTTCCGACCTACGCACCA 59.678 50.000 0.00 0.00 41.07 4.17
264 265 1.445871 AAATTTCCGACCTACGCACC 58.554 50.000 0.00 0.00 41.07 5.01
282 283 3.172824 GGAACGCGACAGAAAACAAAAA 58.827 40.909 15.93 0.00 0.00 1.94
284 285 1.064357 GGGAACGCGACAGAAAACAAA 59.936 47.619 15.93 0.00 0.00 2.83
285 286 0.658897 GGGAACGCGACAGAAAACAA 59.341 50.000 15.93 0.00 0.00 2.83
286 287 1.161563 GGGGAACGCGACAGAAAACA 61.162 55.000 15.93 0.00 0.00 2.83
287 288 1.572941 GGGGAACGCGACAGAAAAC 59.427 57.895 15.93 0.00 0.00 2.43
288 289 4.052519 GGGGAACGCGACAGAAAA 57.947 55.556 15.93 0.00 0.00 2.29
297 298 5.220912 GGTTGTTATATTTGTAGGGGAACGC 60.221 44.000 0.00 0.00 43.76 4.84
298 299 5.881443 TGGTTGTTATATTTGTAGGGGAACG 59.119 40.000 0.00 0.00 0.00 3.95
300 301 8.903059 AATTGGTTGTTATATTTGTAGGGGAA 57.097 30.769 0.00 0.00 0.00 3.97
308 309 9.232082 CCGACATGTAATTGGTTGTTATATTTG 57.768 33.333 0.00 0.00 0.00 2.32
309 310 9.179909 TCCGACATGTAATTGGTTGTTATATTT 57.820 29.630 0.00 0.00 0.00 1.40
664 676 4.150454 CTCTCCCCTCCCCTCGCT 62.150 72.222 0.00 0.00 0.00 4.93
689 701 0.758123 CCTCCTGATTCCTCTCCAGC 59.242 60.000 0.00 0.00 0.00 4.85
712 724 0.900647 ATCCGTCCCTCGATCCATCC 60.901 60.000 0.00 0.00 42.86 3.51
773 790 0.989890 GATTTTCGTCCCACGTCTCG 59.010 55.000 0.00 0.00 43.14 4.04
941 4559 3.942439 GATGGGCCGGGCTCTACC 61.942 72.222 28.80 12.75 37.93 3.18
1129 4756 0.978146 AGAGATGGGGGAAGACGTGG 60.978 60.000 0.00 0.00 0.00 4.94
1143 4868 1.846007 ACCAAGCGAGACAGAGAGAT 58.154 50.000 0.00 0.00 0.00 2.75
1144 4869 1.542030 GAACCAAGCGAGACAGAGAGA 59.458 52.381 0.00 0.00 0.00 3.10
1145 4870 1.403514 GGAACCAAGCGAGACAGAGAG 60.404 57.143 0.00 0.00 0.00 3.20
1266 4996 2.959516 TCACTGGACGAATTAGTGCTG 58.040 47.619 13.51 13.51 41.12 4.41
1269 4999 4.363999 GAGGATCACTGGACGAATTAGTG 58.636 47.826 0.00 0.00 42.34 2.74
1344 5088 5.039984 CACAGATCAATCAGACGAACCTAG 58.960 45.833 0.00 0.00 0.00 3.02
1351 5095 0.926155 CGCCACAGATCAATCAGACG 59.074 55.000 0.00 0.00 0.00 4.18
1354 5098 2.014335 TGTCGCCACAGATCAATCAG 57.986 50.000 0.00 0.00 0.00 2.90
1383 5127 4.172512 AGAGCCAGAGCCATGCGG 62.173 66.667 0.00 0.00 41.25 5.69
1418 5166 4.049640 GGCGAACGCATGGGCAAA 62.050 61.111 20.16 0.00 44.11 3.68
1524 5272 4.991776 AGTCTGCTATATGCTGTCCTCTA 58.008 43.478 0.00 0.00 43.37 2.43
1550 5298 1.654105 CGCACAAGAACGCTAACCTAG 59.346 52.381 0.00 0.00 0.00 3.02
1560 5308 6.921914 AGGGTATATATCTACGCACAAGAAC 58.078 40.000 14.95 0.00 37.10 3.01
1564 5312 5.005740 ACGAGGGTATATATCTACGCACAA 58.994 41.667 14.95 0.00 37.10 3.33
1566 5314 6.668541 TTACGAGGGTATATATCTACGCAC 57.331 41.667 14.95 9.35 37.10 5.34
1631 5379 6.676943 GCAGAGGCAAAAATATACACGCTAAA 60.677 38.462 0.00 0.00 40.72 1.85
1632 5380 5.220777 GCAGAGGCAAAAATATACACGCTAA 60.221 40.000 0.00 0.00 40.72 3.09
1633 5381 4.272504 GCAGAGGCAAAAATATACACGCTA 59.727 41.667 0.00 0.00 40.72 4.26
1634 5382 3.065371 GCAGAGGCAAAAATATACACGCT 59.935 43.478 0.00 0.00 40.72 5.07
1635 5383 3.363178 GCAGAGGCAAAAATATACACGC 58.637 45.455 0.00 0.00 40.72 5.34
1639 5387 2.949644 ACCGGCAGAGGCAAAAATATAC 59.050 45.455 0.00 0.00 43.71 1.47
1693 5441 7.068716 AGTGAGGGCAAAATTAATCTCAATACC 59.931 37.037 4.39 0.00 33.78 2.73
1703 5451 6.152154 GCTACCTAAAGTGAGGGCAAAATTAA 59.848 38.462 0.00 0.00 41.36 1.40
1782 5530 1.677217 GCCGCTTCTCCTTTCATGTCT 60.677 52.381 0.00 0.00 0.00 3.41
1821 5569 1.592223 GACCAGTTCCTCCCTCACG 59.408 63.158 0.00 0.00 0.00 4.35
2006 5780 5.332707 ACGAAAAGAGCAAAAGTTGAGAAC 58.667 37.500 0.00 0.00 0.00 3.01
2015 5789 6.848451 AGTGAAGTTAACGAAAAGAGCAAAA 58.152 32.000 0.00 0.00 0.00 2.44
2028 5802 9.296400 TCTGCAAATTACAAAAGTGAAGTTAAC 57.704 29.630 0.00 0.00 0.00 2.01
2431 6665 4.554292 AGTCATATGCTAGCATGAGTTCG 58.446 43.478 35.20 18.31 37.82 3.95
2472 6706 5.818136 ACTTCCGGTTCAATATCAACATG 57.182 39.130 0.00 0.00 0.00 3.21
2855 8866 1.228552 TTGGCCTTGCTTCTCCCAC 60.229 57.895 3.32 0.00 0.00 4.61
2885 8896 0.397941 TGTGAGCTTTCAGGTCCAGG 59.602 55.000 0.66 0.00 41.77 4.45
2899 8910 1.799258 GCTGGGGTTGCTTGTGTGAG 61.799 60.000 0.00 0.00 0.00 3.51
3059 9595 4.144297 TGCATTTCCAGAGTTACTGCTTT 58.856 39.130 0.00 0.00 44.52 3.51
3127 9663 2.641305 GAATCTGAAGCAGCATCAGGT 58.359 47.619 24.01 16.79 43.58 4.00
3190 9726 2.027837 GTCGCTGACCCCCTAAACTAAA 60.028 50.000 0.00 0.00 0.00 1.85
3209 9745 2.247358 TCCCAGCTTCCCAAAAATGTC 58.753 47.619 0.00 0.00 0.00 3.06
3210 9746 2.397044 TCCCAGCTTCCCAAAAATGT 57.603 45.000 0.00 0.00 0.00 2.71
3215 9751 0.783206 TCCAATCCCAGCTTCCCAAA 59.217 50.000 0.00 0.00 0.00 3.28
3260 9796 9.797642 TGAAGAATGCCAATGATAAGTACATAT 57.202 29.630 0.00 0.00 0.00 1.78
3296 9832 1.227793 GCCTCAGCAGTAGGGATGC 60.228 63.158 1.74 0.00 44.18 3.91
3314 9850 5.465724 GGATTAACATTAGAGGTAAGGCACG 59.534 44.000 0.00 0.00 0.00 5.34
3322 9858 7.121315 GTGCTTTCTTGGATTAACATTAGAGGT 59.879 37.037 0.00 0.00 0.00 3.85
3324 9860 8.044060 TGTGCTTTCTTGGATTAACATTAGAG 57.956 34.615 0.00 0.00 0.00 2.43
3326 9862 6.749118 GCTGTGCTTTCTTGGATTAACATTAG 59.251 38.462 0.00 0.00 0.00 1.73
3350 9886 1.024579 CCATGACCACACTAACCGGC 61.025 60.000 0.00 0.00 0.00 6.13
3369 9905 0.536724 GACCATTTTGCCCACCATCC 59.463 55.000 0.00 0.00 0.00 3.51
3389 9925 9.479549 TTTCTATAAAAATCTTCAGGCAGGAAT 57.520 29.630 0.00 0.00 0.00 3.01
3392 9928 7.148018 TGCTTTCTATAAAAATCTTCAGGCAGG 60.148 37.037 0.00 0.00 0.00 4.85
3395 9931 8.986477 TTTGCTTTCTATAAAAATCTTCAGGC 57.014 30.769 0.00 0.00 0.00 4.85
3407 9943 8.508875 CCGTTTTCTAACCTTTGCTTTCTATAA 58.491 33.333 0.00 0.00 0.00 0.98
3419 9965 3.181448 TGCCTCTTCCGTTTTCTAACCTT 60.181 43.478 0.00 0.00 0.00 3.50
3421 9967 2.774687 TGCCTCTTCCGTTTTCTAACC 58.225 47.619 0.00 0.00 0.00 2.85
3435 9981 5.104485 ACGAAGGGATTAGTATTTTGCCTCT 60.104 40.000 0.00 0.00 30.01 3.69
3441 9987 9.955102 ACTTAGAAACGAAGGGATTAGTATTTT 57.045 29.630 0.00 0.00 0.00 1.82
3454 10000 9.724839 CTCTTCTAGGAATACTTAGAAACGAAG 57.275 37.037 0.00 0.00 41.67 3.79
3462 10009 6.263617 AGGCGTTCTCTTCTAGGAATACTTAG 59.736 42.308 0.00 0.00 0.00 2.18
3519 10166 2.724273 AATGATGCAAAGGCCGGGC 61.724 57.895 22.67 22.67 40.13 6.13
3553 10200 6.831664 AATTCTCCTATGTACCAGTCCAAT 57.168 37.500 0.00 0.00 0.00 3.16
3555 10202 6.636454 AAAATTCTCCTATGTACCAGTCCA 57.364 37.500 0.00 0.00 0.00 4.02
3598 10245 9.575868 TTTTTGGTGTGTATGTTTTCTCCTATA 57.424 29.630 0.00 0.00 0.00 1.31
3649 10296 1.066787 GGAGTTGCTCTAAGTCGCCTT 60.067 52.381 0.00 0.00 39.23 4.35
3650 10297 0.533032 GGAGTTGCTCTAAGTCGCCT 59.467 55.000 0.00 0.00 39.23 5.52
3651 10298 0.246635 TGGAGTTGCTCTAAGTCGCC 59.753 55.000 0.00 0.00 39.23 5.54
3652 10299 1.727335 GTTGGAGTTGCTCTAAGTCGC 59.273 52.381 0.00 0.00 39.23 5.19
3653 10300 1.986378 CGTTGGAGTTGCTCTAAGTCG 59.014 52.381 0.00 0.00 39.23 4.18
3654 10301 2.338500 CCGTTGGAGTTGCTCTAAGTC 58.662 52.381 0.00 0.00 37.89 3.01
3655 10302 1.002087 CCCGTTGGAGTTGCTCTAAGT 59.998 52.381 0.00 0.00 31.92 2.24
3656 10303 1.726853 CCCGTTGGAGTTGCTCTAAG 58.273 55.000 0.00 0.00 31.92 2.18
3657 10304 0.321298 GCCCGTTGGAGTTGCTCTAA 60.321 55.000 0.00 0.00 0.00 2.10
3658 10305 1.295423 GCCCGTTGGAGTTGCTCTA 59.705 57.895 0.00 0.00 0.00 2.43
3660 10307 3.056328 GGCCCGTTGGAGTTGCTC 61.056 66.667 0.00 0.00 0.00 4.26
3663 10310 3.047877 GTCGGCCCGTTGGAGTTG 61.048 66.667 1.63 0.00 0.00 3.16
3674 10321 2.034999 TGTCCATTTGGGTCGGCC 59.965 61.111 0.00 0.00 38.11 6.13
3675 10322 3.590824 CTGTCCATTTGGGTCGGC 58.409 61.111 0.00 0.00 38.11 5.54
3677 10324 0.744414 ATCGCTGTCCATTTGGGTCG 60.744 55.000 0.00 0.00 38.11 4.79
3678 10325 1.463674 AATCGCTGTCCATTTGGGTC 58.536 50.000 0.00 0.00 38.11 4.46
3679 10326 1.923356 AAATCGCTGTCCATTTGGGT 58.077 45.000 0.00 0.00 38.11 4.51
3680 10327 2.029110 ACAAAATCGCTGTCCATTTGGG 60.029 45.455 0.00 0.00 35.77 4.12
3681 10328 3.244976 GACAAAATCGCTGTCCATTTGG 58.755 45.455 0.00 0.00 37.77 3.28
3688 10335 2.307049 CAAACGGACAAAATCGCTGTC 58.693 47.619 0.00 0.00 42.08 3.51
3689 10336 1.001815 CCAAACGGACAAAATCGCTGT 60.002 47.619 0.00 0.00 0.00 4.40
3692 10339 0.312729 ACCCAAACGGACAAAATCGC 59.687 50.000 0.00 0.00 34.64 4.58
3693 10340 1.604755 TGACCCAAACGGACAAAATCG 59.395 47.619 0.00 0.00 33.04 3.34
3694 10341 2.607038 GCTGACCCAAACGGACAAAATC 60.607 50.000 0.00 0.00 35.79 2.17
3695 10342 1.339929 GCTGACCCAAACGGACAAAAT 59.660 47.619 0.00 0.00 35.79 1.82
3697 10344 0.394488 TGCTGACCCAAACGGACAAA 60.394 50.000 0.00 0.00 35.79 2.83
3698 10345 0.394488 TTGCTGACCCAAACGGACAA 60.394 50.000 0.00 0.00 35.79 3.18
3700 10347 1.515521 CCTTGCTGACCCAAACGGAC 61.516 60.000 0.00 0.00 34.64 4.79
3701 10348 1.228124 CCTTGCTGACCCAAACGGA 60.228 57.895 0.00 0.00 34.64 4.69
3702 10349 2.919494 GCCTTGCTGACCCAAACGG 61.919 63.158 0.00 0.00 37.81 4.44
3704 10351 2.644992 CGCCTTGCTGACCCAAAC 59.355 61.111 0.00 0.00 0.00 2.93
3705 10352 2.597217 CCGCCTTGCTGACCCAAA 60.597 61.111 0.00 0.00 0.00 3.28
3707 10354 4.329545 GTCCGCCTTGCTGACCCA 62.330 66.667 0.00 0.00 36.93 4.51
3709 10356 3.050275 GTGTCCGCCTTGCTGACC 61.050 66.667 7.93 0.00 41.00 4.02
3711 10358 2.449031 ATTCGTGTCCGCCTTGCTGA 62.449 55.000 0.00 0.00 0.00 4.26
3712 10359 2.034879 ATTCGTGTCCGCCTTGCTG 61.035 57.895 0.00 0.00 0.00 4.41
3713 10360 2.034879 CATTCGTGTCCGCCTTGCT 61.035 57.895 0.00 0.00 0.00 3.91
3714 10361 2.240612 GACATTCGTGTCCGCCTTGC 62.241 60.000 0.00 0.00 32.97 4.01
3715 10362 1.787847 GACATTCGTGTCCGCCTTG 59.212 57.895 0.00 0.00 32.97 3.61
3716 10363 4.278956 GACATTCGTGTCCGCCTT 57.721 55.556 0.00 0.00 32.97 4.35
3722 10369 1.683790 CGGAAGCGGACATTCGTGTC 61.684 60.000 0.05 0.05 38.04 3.67
3724 10371 3.081133 CGGAAGCGGACATTCGTG 58.919 61.111 0.00 0.00 0.00 4.35
3743 10390 2.537560 CGCATGAGCCGACCCAATC 61.538 63.158 0.00 0.00 37.52 2.67
3769 10416 3.061848 AAAATGGGTCGGCGCCTG 61.062 61.111 26.68 18.23 0.00 4.85
3771 10418 3.059386 TCAAAATGGGTCGGCGCC 61.059 61.111 19.07 19.07 0.00 6.53
3772 10419 2.178273 GTCAAAATGGGTCGGCGC 59.822 61.111 0.00 0.00 0.00 6.53
3773 10420 2.478746 CGTCAAAATGGGTCGGCG 59.521 61.111 0.00 0.00 0.00 6.46
3774 10421 2.874751 CCGTCAAAATGGGTCGGC 59.125 61.111 0.00 0.00 35.01 5.54
3775 10422 1.969064 TGCCGTCAAAATGGGTCGG 60.969 57.895 0.00 0.00 43.37 4.79
3776 10423 1.209127 GTGCCGTCAAAATGGGTCG 59.791 57.895 0.00 0.00 31.56 4.79
3777 10424 1.209127 CGTGCCGTCAAAATGGGTC 59.791 57.895 0.00 0.00 31.56 4.46
3778 10425 2.265182 CCGTGCCGTCAAAATGGGT 61.265 57.895 0.00 0.00 31.56 4.51
3779 10426 1.519751 TTCCGTGCCGTCAAAATGGG 61.520 55.000 0.00 0.00 31.56 4.00
3781 10428 2.126914 TTTTCCGTGCCGTCAAAATG 57.873 45.000 0.00 0.00 0.00 2.32
3831 11290 9.965748 CCGGCTTTAATGTTTAATTAAATGTTG 57.034 29.630 13.54 3.36 34.27 3.33
3833 11292 7.279090 GGCCGGCTTTAATGTTTAATTAAATGT 59.721 33.333 28.56 3.52 34.27 2.71
3837 11296 6.100668 GTGGCCGGCTTTAATGTTTAATTAA 58.899 36.000 28.56 0.00 0.00 1.40
3839 11298 4.500127 GTGGCCGGCTTTAATGTTTAATT 58.500 39.130 28.56 0.00 0.00 1.40
3840 11299 3.428316 CGTGGCCGGCTTTAATGTTTAAT 60.428 43.478 28.56 0.00 0.00 1.40
3841 11300 2.095161 CGTGGCCGGCTTTAATGTTTAA 60.095 45.455 28.56 0.00 0.00 1.52
3842 11301 1.469308 CGTGGCCGGCTTTAATGTTTA 59.531 47.619 28.56 0.00 0.00 2.01
3844 11303 0.606944 TCGTGGCCGGCTTTAATGTT 60.607 50.000 28.56 0.00 33.95 2.71
3845 11304 0.606944 TTCGTGGCCGGCTTTAATGT 60.607 50.000 28.56 0.00 33.95 2.71
3846 11305 0.098728 CTTCGTGGCCGGCTTTAATG 59.901 55.000 28.56 14.81 33.95 1.90
3847 11306 1.029947 CCTTCGTGGCCGGCTTTAAT 61.030 55.000 28.56 0.00 33.95 1.40
3848 11307 1.673009 CCTTCGTGGCCGGCTTTAA 60.673 57.895 28.56 14.43 33.95 1.52
3849 11308 2.046700 CCTTCGTGGCCGGCTTTA 60.047 61.111 28.56 10.66 33.95 1.85
3897 11356 2.671963 GGTCTGGTTTGGGGCGAC 60.672 66.667 0.00 0.00 0.00 5.19
3898 11357 4.323477 CGGTCTGGTTTGGGGCGA 62.323 66.667 0.00 0.00 0.00 5.54
3922 11381 4.363990 AGTGCGAGTGGGTCAGCG 62.364 66.667 0.00 0.00 0.00 5.18
3924 11383 0.171455 GTAGAGTGCGAGTGGGTCAG 59.829 60.000 0.00 0.00 0.00 3.51
3925 11384 0.251209 AGTAGAGTGCGAGTGGGTCA 60.251 55.000 0.00 0.00 0.00 4.02
3926 11385 0.452585 GAGTAGAGTGCGAGTGGGTC 59.547 60.000 0.00 0.00 0.00 4.46
3927 11386 0.966370 GGAGTAGAGTGCGAGTGGGT 60.966 60.000 0.00 0.00 0.00 4.51
3928 11387 1.668101 GGGAGTAGAGTGCGAGTGGG 61.668 65.000 0.00 0.00 0.00 4.61
3930 11389 1.306642 ACGGGAGTAGAGTGCGAGTG 61.307 60.000 0.00 0.00 44.60 3.51
3932 11391 3.906718 ACGGGAGTAGAGTGCGAG 58.093 61.111 0.00 0.00 44.60 5.03
3950 11581 1.007964 CATCGAGCGCTACTCCTGG 60.008 63.158 11.50 0.00 43.01 4.45
3953 11584 2.336809 CCCATCGAGCGCTACTCC 59.663 66.667 11.50 0.00 43.01 3.85
3956 11587 3.224324 TCCCCCATCGAGCGCTAC 61.224 66.667 11.50 2.92 0.00 3.58
3959 11590 4.899239 CTGTCCCCCATCGAGCGC 62.899 72.222 0.00 0.00 0.00 5.92
3960 11591 4.899239 GCTGTCCCCCATCGAGCG 62.899 72.222 0.00 0.00 0.00 5.03
3961 11592 2.932130 GAAGCTGTCCCCCATCGAGC 62.932 65.000 0.00 0.00 0.00 5.03
3962 11593 1.144936 GAAGCTGTCCCCCATCGAG 59.855 63.158 0.00 0.00 0.00 4.04
3963 11594 2.721167 CGAAGCTGTCCCCCATCGA 61.721 63.158 0.00 0.00 32.38 3.59
3964 11595 2.202932 CGAAGCTGTCCCCCATCG 60.203 66.667 0.00 0.00 0.00 3.84
3965 11596 2.190578 CCGAAGCTGTCCCCCATC 59.809 66.667 0.00 0.00 0.00 3.51
3966 11597 4.115199 GCCGAAGCTGTCCCCCAT 62.115 66.667 0.00 0.00 35.50 4.00
3986 11617 2.372690 CCGTGTCAAAGCCGAGTCG 61.373 63.158 5.29 5.29 0.00 4.18
3987 11618 2.027625 CCCGTGTCAAAGCCGAGTC 61.028 63.158 0.00 0.00 0.00 3.36
3988 11619 1.827399 ATCCCGTGTCAAAGCCGAGT 61.827 55.000 0.00 0.00 0.00 4.18
3990 11621 1.375396 CATCCCGTGTCAAAGCCGA 60.375 57.895 0.00 0.00 0.00 5.54
3991 11622 2.398554 CCATCCCGTGTCAAAGCCG 61.399 63.158 0.00 0.00 0.00 5.52
3992 11623 2.700773 GCCATCCCGTGTCAAAGCC 61.701 63.158 0.00 0.00 0.00 4.35
3993 11624 2.877691 GCCATCCCGTGTCAAAGC 59.122 61.111 0.00 0.00 0.00 3.51
3994 11625 2.398554 CCGCCATCCCGTGTCAAAG 61.399 63.158 0.00 0.00 0.00 2.77
3995 11626 2.359354 CCGCCATCCCGTGTCAAA 60.359 61.111 0.00 0.00 0.00 2.69
3996 11627 4.402528 CCCGCCATCCCGTGTCAA 62.403 66.667 0.00 0.00 0.00 3.18
4000 11631 4.402528 TTCACCCGCCATCCCGTG 62.403 66.667 0.00 0.00 0.00 4.94
4001 11632 4.404098 GTTCACCCGCCATCCCGT 62.404 66.667 0.00 0.00 0.00 5.28
4053 11684 1.893808 CGTATGAGGTGGCCATGGC 60.894 63.158 29.47 29.47 41.06 4.40
4056 11687 2.510906 GGCGTATGAGGTGGCCAT 59.489 61.111 9.72 0.00 44.91 4.40
4057 11688 4.155733 CGGCGTATGAGGTGGCCA 62.156 66.667 0.00 0.00 45.85 5.36
4060 11691 3.792053 GAGGCGGCGTATGAGGTGG 62.792 68.421 9.37 0.00 0.00 4.61
4062 11693 3.537874 GGAGGCGGCGTATGAGGT 61.538 66.667 9.37 0.00 0.00 3.85
4063 11694 3.214250 GAGGAGGCGGCGTATGAGG 62.214 68.421 9.37 0.00 0.00 3.86
4064 11695 1.739338 AAGAGGAGGCGGCGTATGAG 61.739 60.000 9.37 0.00 0.00 2.90
4065 11696 1.735376 GAAGAGGAGGCGGCGTATGA 61.735 60.000 9.37 0.00 0.00 2.15
4066 11697 1.300233 GAAGAGGAGGCGGCGTATG 60.300 63.158 9.37 0.00 0.00 2.39
4067 11698 2.499827 GGAAGAGGAGGCGGCGTAT 61.500 63.158 9.37 0.00 0.00 3.06
4068 11699 3.145551 GGAAGAGGAGGCGGCGTA 61.146 66.667 9.37 0.00 0.00 4.42
4070 11701 4.214327 GAGGAAGAGGAGGCGGCG 62.214 72.222 0.51 0.51 0.00 6.46
4071 11702 2.660064 TTGAGGAAGAGGAGGCGGC 61.660 63.158 0.00 0.00 0.00 6.53
4072 11703 1.219393 GTTGAGGAAGAGGAGGCGG 59.781 63.158 0.00 0.00 0.00 6.13
4073 11704 1.219393 GGTTGAGGAAGAGGAGGCG 59.781 63.158 0.00 0.00 0.00 5.52
4074 11705 1.219393 CGGTTGAGGAAGAGGAGGC 59.781 63.158 0.00 0.00 0.00 4.70
4075 11706 1.219393 GCGGTTGAGGAAGAGGAGG 59.781 63.158 0.00 0.00 0.00 4.30
4076 11707 1.219393 GGCGGTTGAGGAAGAGGAG 59.781 63.158 0.00 0.00 0.00 3.69
4078 11709 2.125512 CGGCGGTTGAGGAAGAGG 60.126 66.667 0.00 0.00 0.00 3.69
4100 11731 4.803426 GAGGACGAGCGGCACAGG 62.803 72.222 1.45 0.00 0.00 4.00
4101 11732 4.803426 GGAGGACGAGCGGCACAG 62.803 72.222 1.45 0.00 0.00 3.66
4107 11738 4.244802 GAGCGAGGAGGACGAGCG 62.245 72.222 0.00 0.00 0.00 5.03
4108 11739 2.826738 AGAGCGAGGAGGACGAGC 60.827 66.667 0.00 0.00 0.00 5.03
4110 11741 2.124653 GGAGAGCGAGGAGGACGA 60.125 66.667 0.00 0.00 0.00 4.20
4111 11742 3.213402 GGGAGAGCGAGGAGGACG 61.213 72.222 0.00 0.00 0.00 4.79
4112 11743 3.213402 CGGGAGAGCGAGGAGGAC 61.213 72.222 0.00 0.00 0.00 3.85
4114 11745 3.417167 TACCGGGAGAGCGAGGAGG 62.417 68.421 6.32 0.00 0.00 4.30
4115 11746 1.894756 CTACCGGGAGAGCGAGGAG 60.895 68.421 8.48 0.00 0.00 3.69
4117 11748 2.188161 GTCTACCGGGAGAGCGAGG 61.188 68.421 19.47 0.00 0.00 4.63
4118 11749 2.535788 CGTCTACCGGGAGAGCGAG 61.536 68.421 25.42 12.05 0.00 5.03
4119 11750 2.513204 CGTCTACCGGGAGAGCGA 60.513 66.667 25.42 1.05 0.00 4.93
4129 11760 2.183555 CCCTTGCGGTCGTCTACC 59.816 66.667 0.00 0.00 45.77 3.18
4163 12877 3.151022 GAGGACCAGGAGGCGGAG 61.151 72.222 0.00 0.00 39.06 4.63
4202 12916 4.961511 TCGACTGCACCGTGCCAC 62.962 66.667 20.67 10.62 44.23 5.01
4203 12917 4.961511 GTCGACTGCACCGTGCCA 62.962 66.667 20.67 8.09 44.23 4.92
4206 12920 2.365068 CGAAGTCGACTGCACCGTG 61.365 63.158 23.35 2.63 43.02 4.94
4208 12922 3.470567 GCGAAGTCGACTGCACCG 61.471 66.667 23.35 20.78 43.02 4.94
4209 12923 3.470567 CGCGAAGTCGACTGCACC 61.471 66.667 23.35 12.13 43.02 5.01
4212 12926 2.763881 GTTCGCGAAGTCGACTGC 59.236 61.111 24.13 17.34 43.02 4.40
4215 12929 3.824510 GGCGTTCGCGAAGTCGAC 61.825 66.667 28.89 24.68 44.71 4.20
4250 12964 0.734253 CTGGTTCTCCTTCGAGCACG 60.734 60.000 0.00 0.00 33.52 5.34
4251 12965 1.016653 GCTGGTTCTCCTTCGAGCAC 61.017 60.000 0.00 0.00 35.94 4.40
4253 12967 1.807573 CGCTGGTTCTCCTTCGAGC 60.808 63.158 0.00 0.00 35.94 5.03
4254 12968 1.807573 GCGCTGGTTCTCCTTCGAG 60.808 63.158 0.00 0.00 37.48 4.04
4255 12969 2.261671 GCGCTGGTTCTCCTTCGA 59.738 61.111 0.00 0.00 33.57 3.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.