Multiple sequence alignment - TraesCS1D01G424600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G424600 chr1D 100.000 4037 0 0 1 4037 478890749 478886713 0.000000e+00 7456.0
1 TraesCS1D01G424600 chr1D 100.000 1750 0 0 4307 6056 478886443 478884694 0.000000e+00 3232.0
2 TraesCS1D01G424600 chr1B 92.366 1572 80 17 1608 3164 666855510 666853964 0.000000e+00 2202.0
3 TraesCS1D01G424600 chr1B 91.673 1357 85 15 4351 5703 666852945 666851613 0.000000e+00 1855.0
4 TraesCS1D01G424600 chr1B 95.434 876 29 4 3163 4037 666853822 666852957 0.000000e+00 1386.0
5 TraesCS1D01G424600 chr1B 92.269 802 31 16 801 1585 666856362 666855575 0.000000e+00 1109.0
6 TraesCS1D01G424600 chr1B 92.544 456 28 3 147 597 666857599 666857145 0.000000e+00 649.0
7 TraesCS1D01G424600 chr1B 94.444 54 3 0 643 696 666857004 666856951 3.890000e-12 84.2
8 TraesCS1D01G424600 chr1A 91.214 1400 61 24 746 2104 575002355 575000977 0.000000e+00 1847.0
9 TraesCS1D01G424600 chr1A 93.426 1080 44 10 2094 3164 575000767 574999706 0.000000e+00 1576.0
10 TraesCS1D01G424600 chr1A 92.908 846 47 9 4841 5677 574997725 574996884 0.000000e+00 1218.0
11 TraesCS1D01G424600 chr1A 90.816 784 40 13 3278 4037 574999521 574998746 0.000000e+00 1020.0
12 TraesCS1D01G424600 chr1A 91.634 514 38 3 4307 4816 574998722 574998210 0.000000e+00 706.0
13 TraesCS1D01G424600 chr1A 86.224 588 43 17 147 697 575112465 575111879 2.410000e-168 603.0
14 TraesCS1D01G424600 chr1A 95.676 370 13 3 328 697 575076630 575076264 5.230000e-165 592.0
15 TraesCS1D01G424600 chr1A 95.135 370 15 3 328 697 575036061 575035695 1.130000e-161 580.0
16 TraesCS1D01G424600 chr1A 93.767 369 21 2 328 696 575002738 575002372 2.470000e-153 553.0
17 TraesCS1D01G424600 chr1A 89.888 356 27 3 147 493 575007796 575007441 3.330000e-122 449.0
18 TraesCS1D01G424600 chr1A 93.636 220 13 1 478 697 575007425 575007207 1.630000e-85 327.0
19 TraesCS1D01G424600 chr1A 98.810 84 1 0 235 318 575111665 575111582 3.780000e-32 150.0
20 TraesCS1D01G424600 chr1A 95.294 85 4 0 235 319 575006993 575006909 1.060000e-27 135.0
21 TraesCS1D01G424600 chr1A 95.455 44 2 0 3161 3204 574999572 574999529 3.030000e-08 71.3
22 TraesCS1D01G424600 chr6D 97.297 148 3 1 1 147 244276715 244276568 3.620000e-62 250.0
23 TraesCS1D01G424600 chr6D 96.599 147 4 1 1 146 244282414 244282268 6.060000e-60 243.0
24 TraesCS1D01G424600 chr6D 88.430 121 12 2 4692 4810 317078901 317078781 1.760000e-30 145.0
25 TraesCS1D01G424600 chr2D 97.297 148 2 2 1 147 407937265 407937119 3.620000e-62 250.0
26 TraesCS1D01G424600 chr5A 97.279 147 3 1 1 146 369312496 369312350 1.300000e-61 248.0
27 TraesCS1D01G424600 chr5A 96.622 148 4 1 1 147 369306785 369306638 1.690000e-60 244.0
28 TraesCS1D01G424600 chr4D 97.241 145 3 1 1 144 179475414 179475270 1.690000e-60 244.0
29 TraesCS1D01G424600 chr4D 96.599 147 3 2 1 146 352816053 352815908 6.060000e-60 243.0
30 TraesCS1D01G424600 chr5D 96.599 147 3 2 1 146 268504069 268503924 6.060000e-60 243.0
31 TraesCS1D01G424600 chr3A 96.599 147 4 1 1 146 150920424 150920278 6.060000e-60 243.0
32 TraesCS1D01G424600 chr7D 92.453 106 8 0 4700 4805 566783017 566782912 1.050000e-32 152.0
33 TraesCS1D01G424600 chr7D 91.743 109 7 2 4700 4807 186412243 186412350 3.780000e-32 150.0
34 TraesCS1D01G424600 chr7D 91.667 108 9 0 4699 4806 236821643 236821536 3.780000e-32 150.0
35 TraesCS1D01G424600 chr7D 87.805 123 13 2 4696 4817 1963795 1963916 6.330000e-30 143.0
36 TraesCS1D01G424600 chr7A 92.453 106 8 0 4700 4805 652906564 652906459 1.050000e-32 152.0
37 TraesCS1D01G424600 chr6B 89.167 120 12 1 4692 4810 507471540 507471659 1.360000e-31 148.0
38 TraesCS1D01G424600 chr3B 89.157 83 7 2 697 779 567805764 567805684 1.070000e-17 102.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G424600 chr1D 478884694 478890749 6055 True 5344.000000 7456 100.000000 1 6056 2 chr1D.!!$R1 6055
1 TraesCS1D01G424600 chr1B 666851613 666857599 5986 True 1214.200000 2202 93.121667 147 5703 6 chr1B.!!$R1 5556
2 TraesCS1D01G424600 chr1A 574996884 575002738 5854 True 998.757143 1847 92.745714 328 5677 7 chr1A.!!$R3 5349
3 TraesCS1D01G424600 chr1A 575111582 575112465 883 True 376.500000 603 92.517000 147 697 2 chr1A.!!$R5 550
4 TraesCS1D01G424600 chr1A 575006909 575007796 887 True 303.666667 449 92.939333 147 697 3 chr1A.!!$R4 550

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
73 74 0.036010 AGTCGCCAATCTTCTGGTGG 60.036 55.0 3.51 0.00 45.43 4.61 F
111 112 0.175073 GTCCGGCCGGGTCATATATC 59.825 60.0 42.36 17.50 37.00 1.63 F
121 122 0.175073 GTCATATATCCGGCCGGGTC 59.825 60.0 42.36 20.39 37.00 4.46 F
122 123 0.251877 TCATATATCCGGCCGGGTCA 60.252 55.0 42.36 27.93 37.00 4.02 F
2462 3404 0.179100 CGCCAGTGCATGCTACTACT 60.179 55.0 20.33 11.02 37.32 2.57 F
3234 4339 0.886490 TGTGTGTGTGTGTGTGTGCA 60.886 50.0 0.00 0.00 0.00 4.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2048 2765 1.001048 TGCAAGCTTCTCAACACATGC 60.001 47.619 0.00 0.00 0.00 4.06 R
2182 3123 1.134788 CCCATGACACCGTAGTCTTCC 60.135 57.143 0.00 0.00 39.27 3.46 R
2344 3285 7.989741 ACTAAGATGGACATCAACTTGGATTAG 59.010 37.037 14.16 11.65 38.42 1.73 R
2664 3608 6.528537 AATTGTAAAGCATCATGTGGCTAA 57.471 33.333 12.91 5.78 40.01 3.09 R
3741 4870 0.107831 GCAGGTAGGGACACACACAA 59.892 55.000 0.00 0.00 0.00 3.33 R
5730 7335 0.032403 GCACTTGCAACCATGAAGCA 59.968 50.000 0.00 0.00 41.59 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.649664 CCAATGAGTCTTCAGGCTCG 58.350 55.000 4.02 0.00 36.61 5.03
20 21 1.066573 CCAATGAGTCTTCAGGCTCGT 60.067 52.381 4.02 0.53 36.61 4.18
21 22 1.998315 CAATGAGTCTTCAGGCTCGTG 59.002 52.381 3.88 1.32 36.61 4.35
22 23 1.550327 ATGAGTCTTCAGGCTCGTGA 58.450 50.000 2.22 0.00 36.61 4.35
23 24 0.884514 TGAGTCTTCAGGCTCGTGAG 59.115 55.000 4.02 0.00 34.67 3.51
24 25 0.885196 GAGTCTTCAGGCTCGTGAGT 59.115 55.000 0.00 0.00 0.00 3.41
25 26 0.885196 AGTCTTCAGGCTCGTGAGTC 59.115 55.000 0.00 0.00 0.00 3.36
26 27 0.455295 GTCTTCAGGCTCGTGAGTCG 60.455 60.000 0.00 0.00 38.27 4.18
27 28 0.889638 TCTTCAGGCTCGTGAGTCGT 60.890 55.000 0.00 0.00 38.27 4.34
28 29 0.455295 CTTCAGGCTCGTGAGTCGTC 60.455 60.000 0.00 0.00 38.27 4.20
29 30 1.170290 TTCAGGCTCGTGAGTCGTCA 61.170 55.000 0.00 0.00 38.27 4.35
46 47 2.111043 ACACCAGTGAACCGCCAG 59.889 61.111 4.48 0.00 0.00 4.85
47 48 2.425592 CACCAGTGAACCGCCAGA 59.574 61.111 0.00 0.00 0.00 3.86
48 49 1.961277 CACCAGTGAACCGCCAGAC 60.961 63.158 0.00 0.00 0.00 3.51
49 50 2.425592 CCAGTGAACCGCCAGACA 59.574 61.111 0.00 0.00 0.00 3.41
50 51 1.961277 CCAGTGAACCGCCAGACAC 60.961 63.158 0.00 0.00 0.00 3.67
51 52 1.227527 CAGTGAACCGCCAGACACA 60.228 57.895 0.00 0.00 35.97 3.72
52 53 0.603707 CAGTGAACCGCCAGACACAT 60.604 55.000 0.00 0.00 35.97 3.21
53 54 0.603707 AGTGAACCGCCAGACACATG 60.604 55.000 0.00 0.00 35.97 3.21
54 55 0.602638 GTGAACCGCCAGACACATGA 60.603 55.000 0.00 0.00 34.05 3.07
55 56 0.320683 TGAACCGCCAGACACATGAG 60.321 55.000 0.00 0.00 0.00 2.90
56 57 0.320771 GAACCGCCAGACACATGAGT 60.321 55.000 0.00 0.00 0.00 3.41
57 58 0.320771 AACCGCCAGACACATGAGTC 60.321 55.000 14.67 14.67 38.81 3.36
58 59 1.807165 CCGCCAGACACATGAGTCG 60.807 63.158 16.19 11.48 43.24 4.18
59 60 2.447887 CGCCAGACACATGAGTCGC 61.448 63.158 16.19 13.54 43.24 5.19
60 61 2.103042 GCCAGACACATGAGTCGCC 61.103 63.158 16.19 6.42 43.24 5.54
61 62 1.293179 CCAGACACATGAGTCGCCA 59.707 57.895 16.19 0.00 43.24 5.69
62 63 0.320683 CCAGACACATGAGTCGCCAA 60.321 55.000 16.19 0.00 43.24 4.52
63 64 1.676916 CCAGACACATGAGTCGCCAAT 60.677 52.381 16.19 0.00 43.24 3.16
64 65 1.662629 CAGACACATGAGTCGCCAATC 59.337 52.381 16.19 0.00 43.24 2.67
65 66 1.552337 AGACACATGAGTCGCCAATCT 59.448 47.619 16.19 0.00 43.24 2.40
66 67 2.027745 AGACACATGAGTCGCCAATCTT 60.028 45.455 16.19 0.00 43.24 2.40
67 68 2.349886 GACACATGAGTCGCCAATCTTC 59.650 50.000 7.55 0.00 0.00 2.87
68 69 2.027745 ACACATGAGTCGCCAATCTTCT 60.028 45.455 0.00 0.00 0.00 2.85
69 70 2.350804 CACATGAGTCGCCAATCTTCTG 59.649 50.000 0.00 0.00 0.00 3.02
70 71 1.938577 CATGAGTCGCCAATCTTCTGG 59.061 52.381 0.00 0.00 39.71 3.86
71 72 0.976641 TGAGTCGCCAATCTTCTGGT 59.023 50.000 0.00 0.00 38.86 4.00
72 73 1.338105 TGAGTCGCCAATCTTCTGGTG 60.338 52.381 0.00 0.00 46.53 4.17
73 74 0.036010 AGTCGCCAATCTTCTGGTGG 60.036 55.000 3.51 0.00 45.43 4.61
74 75 1.026718 GTCGCCAATCTTCTGGTGGG 61.027 60.000 3.51 0.00 45.43 4.61
75 76 1.002134 CGCCAATCTTCTGGTGGGT 60.002 57.895 0.00 0.00 42.30 4.51
76 77 0.609131 CGCCAATCTTCTGGTGGGTT 60.609 55.000 0.00 0.00 42.30 4.11
77 78 0.890683 GCCAATCTTCTGGTGGGTTG 59.109 55.000 0.00 0.00 38.86 3.77
78 79 0.890683 CCAATCTTCTGGTGGGTTGC 59.109 55.000 0.00 0.00 0.00 4.17
79 80 0.890683 CAATCTTCTGGTGGGTTGCC 59.109 55.000 0.00 0.00 0.00 4.52
80 81 0.482446 AATCTTCTGGTGGGTTGCCA 59.518 50.000 0.00 0.00 34.42 4.92
81 82 0.482446 ATCTTCTGGTGGGTTGCCAA 59.518 50.000 0.00 0.00 35.32 4.52
82 83 0.482446 TCTTCTGGTGGGTTGCCAAT 59.518 50.000 0.00 0.00 35.32 3.16
83 84 0.604578 CTTCTGGTGGGTTGCCAATG 59.395 55.000 0.00 0.00 35.32 2.82
84 85 0.187117 TTCTGGTGGGTTGCCAATGA 59.813 50.000 0.00 0.00 35.32 2.57
85 86 0.187117 TCTGGTGGGTTGCCAATGAA 59.813 50.000 0.00 0.00 35.32 2.57
86 87 1.047002 CTGGTGGGTTGCCAATGAAA 58.953 50.000 0.00 0.00 35.32 2.69
87 88 0.755686 TGGTGGGTTGCCAATGAAAC 59.244 50.000 0.00 0.00 32.29 2.78
88 89 0.319469 GGTGGGTTGCCAATGAAACG 60.319 55.000 0.00 0.00 0.00 3.60
89 90 0.943835 GTGGGTTGCCAATGAAACGC 60.944 55.000 8.23 8.23 39.09 4.84
90 91 1.365633 GGGTTGCCAATGAAACGCA 59.634 52.632 9.65 0.00 38.64 5.24
91 92 0.249657 GGGTTGCCAATGAAACGCAA 60.250 50.000 9.65 1.79 40.06 4.85
92 93 1.139163 GGTTGCCAATGAAACGCAAG 58.861 50.000 0.00 0.00 42.77 4.01
106 107 4.096003 CAAGTCCGGCCGGGTCAT 62.096 66.667 42.36 25.38 37.00 3.06
107 108 2.364579 AAGTCCGGCCGGGTCATA 60.365 61.111 42.36 22.14 37.00 2.15
108 109 1.764854 AAGTCCGGCCGGGTCATAT 60.765 57.895 42.36 20.57 37.00 1.78
109 110 0.470456 AAGTCCGGCCGGGTCATATA 60.470 55.000 42.36 20.46 37.00 0.86
110 111 0.252103 AGTCCGGCCGGGTCATATAT 60.252 55.000 42.36 17.18 37.00 0.86
111 112 0.175073 GTCCGGCCGGGTCATATATC 59.825 60.000 42.36 17.50 37.00 1.63
112 113 0.974010 TCCGGCCGGGTCATATATCC 60.974 60.000 42.36 0.00 37.00 2.59
113 114 1.141019 CGGCCGGGTCATATATCCG 59.859 63.158 20.10 0.00 43.05 4.18
117 118 1.141019 CGGGTCATATATCCGGCCG 59.859 63.158 21.04 21.04 40.07 6.13
118 119 1.520666 GGGTCATATATCCGGCCGG 59.479 63.158 39.13 39.13 0.00 6.13
119 120 1.520666 GGTCATATATCCGGCCGGG 59.479 63.158 42.36 25.81 35.59 5.73
120 121 1.262640 GGTCATATATCCGGCCGGGT 61.263 60.000 42.36 39.39 37.00 5.28
121 122 0.175073 GTCATATATCCGGCCGGGTC 59.825 60.000 42.36 20.39 37.00 4.46
122 123 0.251877 TCATATATCCGGCCGGGTCA 60.252 55.000 42.36 27.93 37.00 4.02
123 124 0.830648 CATATATCCGGCCGGGTCAT 59.169 55.000 42.36 31.38 37.00 3.06
124 125 2.036387 CATATATCCGGCCGGGTCATA 58.964 52.381 42.36 32.31 37.00 2.15
125 126 1.477553 TATATCCGGCCGGGTCATAC 58.522 55.000 42.36 0.00 37.00 2.39
126 127 1.262640 ATATCCGGCCGGGTCATACC 61.263 60.000 42.36 0.00 37.60 2.73
172 173 4.265056 GGTGGTGGTCTGCCGGTT 62.265 66.667 1.90 0.00 37.67 4.44
192 193 4.142381 GGTTATGCATCAGTGGTTTTCCTC 60.142 45.833 0.19 0.00 41.38 3.71
394 404 2.240921 GGGCTTCTTTGGAGGAAGAGAT 59.759 50.000 7.52 0.00 41.71 2.75
504 550 5.193679 GTCTAGCTTGTTATGGGTCCATTT 58.806 41.667 7.89 0.00 37.82 2.32
505 551 5.652452 GTCTAGCTTGTTATGGGTCCATTTT 59.348 40.000 7.89 0.00 37.82 1.82
611 686 5.125100 TGTAAAGCAAGATGAAAGCCTTG 57.875 39.130 0.00 0.00 41.84 3.61
723 904 6.655003 GGAGCGAATATATTTGGGATTCTCAA 59.345 38.462 13.53 0.00 0.00 3.02
733 914 4.672587 TGGGATTCTCAATAAGGAGTCG 57.327 45.455 0.00 0.00 36.30 4.18
884 1514 9.163903 GAGTACTATTCCGTAAAAATAGTCGAC 57.836 37.037 7.70 7.70 43.21 4.20
885 1515 8.897752 AGTACTATTCCGTAAAAATAGTCGACT 58.102 33.333 23.66 23.66 43.21 4.18
1095 1740 3.580458 CTCTTCTCAACCCTTCTTCCTCA 59.420 47.826 0.00 0.00 0.00 3.86
1193 1839 1.040893 ATGGTCGCAGGATGTCGGTA 61.041 55.000 0.00 0.00 39.31 4.02
1265 1911 2.511373 TACTTCATGCAGCGCGGG 60.511 61.111 8.83 3.39 0.00 6.13
1352 2001 6.151648 CCGTATCCATCATCCATGCTATTTTT 59.848 38.462 0.00 0.00 0.00 1.94
1353 2002 7.025365 CGTATCCATCATCCATGCTATTTTTG 58.975 38.462 0.00 0.00 0.00 2.44
1355 2004 4.897076 TCCATCATCCATGCTATTTTTGCT 59.103 37.500 0.00 0.00 0.00 3.91
1356 2005 6.069994 TCCATCATCCATGCTATTTTTGCTA 58.930 36.000 0.00 0.00 0.00 3.49
1357 2006 6.208007 TCCATCATCCATGCTATTTTTGCTAG 59.792 38.462 0.00 0.00 0.00 3.42
1362 2011 7.555914 TCATCCATGCTATTTTTGCTAGTACAA 59.444 33.333 0.00 0.00 0.00 2.41
1363 2012 7.695480 TCCATGCTATTTTTGCTAGTACAAA 57.305 32.000 0.00 0.00 37.74 2.83
1364 2013 8.116651 TCCATGCTATTTTTGCTAGTACAAAA 57.883 30.769 0.00 4.67 45.29 2.44
1365 2014 8.026607 TCCATGCTATTTTTGCTAGTACAAAAC 58.973 33.333 7.51 0.00 46.28 2.43
1366 2015 7.812191 CCATGCTATTTTTGCTAGTACAAAACA 59.188 33.333 7.51 4.35 46.28 2.83
1367 2016 8.638565 CATGCTATTTTTGCTAGTACAAAACAC 58.361 33.333 7.51 0.00 46.28 3.32
1469 2122 9.938280 ATATAAATTAATTAGCTGCTCGGTACA 57.062 29.630 4.91 0.00 0.00 2.90
1488 2150 9.781834 TCGGTACATAATTTATTTGCAAGAAAG 57.218 29.630 12.44 4.10 0.00 2.62
1603 2274 4.282496 AGTAACCAAACATGTCCACCAAA 58.718 39.130 0.00 0.00 0.00 3.28
1617 2327 7.016153 TGTCCACCAAAGTTGTATCTCTAAT 57.984 36.000 0.00 0.00 0.00 1.73
1647 2358 2.609427 TATGTCATGTGCTCCAGCTC 57.391 50.000 0.00 0.00 42.66 4.09
1706 2417 9.588096 GTTTACCATTTTTAGGGATCTGGATAT 57.412 33.333 0.74 0.00 0.00 1.63
1719 2430 4.437682 TCTGGATATTCCCCACACATTC 57.562 45.455 0.00 0.00 35.03 2.67
1788 2499 3.565902 CGACAGCACACATCTAGGAGATA 59.434 47.826 0.00 0.00 32.12 1.98
2064 2782 1.202855 ACCTGCATGTGTTGAGAAGCT 60.203 47.619 0.00 0.00 0.00 3.74
2182 3123 1.278637 GTTTGACAGGGTGCGTTCG 59.721 57.895 0.00 0.00 0.00 3.95
2344 3285 8.746751 GCTTTGTGAAATGAGTAAGAGTTTTTC 58.253 33.333 0.00 0.00 0.00 2.29
2427 3369 1.009552 TGTATCTGGTCACCCCTGGAT 59.990 52.381 0.00 0.00 33.14 3.41
2461 3403 1.154205 CCGCCAGTGCATGCTACTAC 61.154 60.000 20.33 8.60 37.32 2.73
2462 3404 0.179100 CGCCAGTGCATGCTACTACT 60.179 55.000 20.33 11.02 37.32 2.57
2463 3405 1.067060 CGCCAGTGCATGCTACTACTA 59.933 52.381 20.33 0.00 37.32 1.82
2476 3420 7.063544 GCATGCTACTACTATGTGCTAATTACC 59.936 40.741 11.37 0.00 0.00 2.85
2563 3507 4.017499 AGTTTAAGTGCAGGGGTCCAATAT 60.017 41.667 0.00 0.00 0.00 1.28
2746 3690 4.600111 TGGAACTTAAGGACCACCATAACT 59.400 41.667 15.62 0.00 38.94 2.24
2763 3707 9.520204 CACCATAACTATTCACATGGAAAATTC 57.480 33.333 6.46 0.00 40.37 2.17
2764 3708 9.479549 ACCATAACTATTCACATGGAAAATTCT 57.520 29.630 6.46 0.00 40.37 2.40
2809 3754 7.818930 TGGCTTATTTTATTTCTTCTTGCCAAG 59.181 33.333 0.00 0.00 41.80 3.61
2926 3887 2.742053 TCGCTAGTTTGGCATCAAGAAC 59.258 45.455 0.00 0.00 33.98 3.01
2934 3895 6.691508 AGTTTGGCATCAAGAACTTATTTCC 58.308 36.000 0.00 0.00 34.32 3.13
2946 3907 7.432148 AGAACTTATTTCCCCTTTGTGTTTT 57.568 32.000 0.00 0.00 34.32 2.43
3101 4062 5.008613 GCTTGTCAGAAATACACAGGTTTGA 59.991 40.000 0.00 0.00 0.00 2.69
3104 4065 7.667043 TGTCAGAAATACACAGGTTTGATAC 57.333 36.000 0.00 0.00 0.00 2.24
3171 4276 5.637810 CCGTTAGCTTTCAACACAGAGAATA 59.362 40.000 0.00 0.00 0.00 1.75
3231 4336 1.819928 ACATGTGTGTGTGTGTGTGT 58.180 45.000 0.00 0.00 37.14 3.72
3234 4339 0.886490 TGTGTGTGTGTGTGTGTGCA 60.886 50.000 0.00 0.00 0.00 4.57
3381 4486 5.139435 TCTCTCGCTTTTCTTTCTCATCA 57.861 39.130 0.00 0.00 0.00 3.07
3477 4605 3.785486 TGGAACTCTCATACGATGCAAG 58.215 45.455 0.00 0.00 0.00 4.01
3575 4703 2.746277 GTGGGCTGCACGGTAAGG 60.746 66.667 0.50 0.00 0.00 2.69
3732 4861 8.673626 ATGCAATTATTCTGTTTAAACGTCTG 57.326 30.769 13.45 4.39 0.00 3.51
3741 4870 7.972832 TCTGTTTAAACGTCTGGATTTACAT 57.027 32.000 13.45 0.00 0.00 2.29
3904 5033 5.193679 GCCCCTGACTACATTTCTTTATGT 58.806 41.667 0.00 0.00 41.43 2.29
3905 5034 5.297029 GCCCCTGACTACATTTCTTTATGTC 59.703 44.000 0.00 0.00 39.39 3.06
3988 5117 1.135286 GCTGCATGTTGGAAGCCTAAC 60.135 52.381 0.00 0.00 0.00 2.34
4026 5155 1.063174 GGTCAGCTGCGCTTCTTTATG 59.937 52.381 9.47 0.00 36.40 1.90
4331 5460 7.831753 TGTATCTCTGCTAATTACTATGAGGC 58.168 38.462 0.00 0.00 0.00 4.70
4335 5464 6.325028 TCTCTGCTAATTACTATGAGGCTGTT 59.675 38.462 0.00 0.00 0.00 3.16
4355 5484 6.458232 TGTTTACCAAAATAGTTGTGCACT 57.542 33.333 19.41 0.00 39.87 4.40
4391 5520 6.949352 TGATTCCCTTCTAGCATTTGAATC 57.051 37.500 0.00 0.00 37.93 2.52
4434 5563 1.597663 GCCATCGACGGGTCATTTTAG 59.402 52.381 0.00 0.00 0.00 1.85
4460 5589 6.287107 AGAAAGAAACTACAACGTGTCATG 57.713 37.500 0.00 0.00 0.00 3.07
4466 5595 4.546829 ACTACAACGTGTCATGGGTTAT 57.453 40.909 0.00 0.00 0.00 1.89
4708 5837 6.607004 TCGAAGAAAAATCTTACTCCCTCT 57.393 37.500 0.00 0.00 0.00 3.69
4736 5865 7.613585 TCCATATTAGTTGTTACTGAAACGGA 58.386 34.615 0.00 0.00 41.30 4.69
4795 5928 6.624917 CGTTTGAGCGACAAGTAATATGAATG 59.375 38.462 0.00 0.00 39.77 2.67
4847 6440 6.227298 AGATAGTAACCTTGTCATCACAGG 57.773 41.667 0.00 0.00 32.71 4.00
4866 6459 8.374327 TCACAGGCTTTTAACTTTAGAACTAC 57.626 34.615 0.00 0.00 0.00 2.73
4867 6466 7.988599 TCACAGGCTTTTAACTTTAGAACTACA 59.011 33.333 0.00 0.00 0.00 2.74
4939 6538 1.064060 GTCGGTAGCACAAATGATGGC 59.936 52.381 0.00 0.00 0.00 4.40
5016 6615 0.107831 GTGACCACAAGCAGGGTACA 59.892 55.000 0.00 0.00 37.57 2.90
5022 6621 0.537188 ACAAGCAGGGTACAGGATCG 59.463 55.000 0.00 0.00 0.00 3.69
5099 6698 6.160664 TCTTACTATGTTGCGCTGTAAAAC 57.839 37.500 9.73 4.58 0.00 2.43
5130 6729 9.784531 ATGACTTTTTGTTCAAGAGATCTTCTA 57.215 29.630 0.00 0.00 34.14 2.10
5153 6752 8.841300 TCTAGATGTTGTGCTACTAAGACTATG 58.159 37.037 0.00 0.00 0.00 2.23
5207 6806 4.701663 ACCATGCGGTCTTGACAG 57.298 55.556 3.08 0.00 44.71 3.51
5353 6953 8.814038 ATTATGTTTCTTTTGTGATAGCTCCT 57.186 30.769 0.00 0.00 0.00 3.69
5354 6954 5.947228 TGTTTCTTTTGTGATAGCTCCTG 57.053 39.130 0.00 0.00 0.00 3.86
5356 6956 5.239306 TGTTTCTTTTGTGATAGCTCCTGTG 59.761 40.000 0.00 0.00 0.00 3.66
5445 7046 9.995003 TTTTGTTATCTGCATTTTAAGATTGGT 57.005 25.926 0.00 0.00 34.91 3.67
5456 7057 7.654520 GCATTTTAAGATTGGTACATGCATCAT 59.345 33.333 0.00 0.00 39.30 2.45
5457 7058 8.974408 CATTTTAAGATTGGTACATGCATCATG 58.026 33.333 0.00 5.35 46.18 3.07
5473 7077 4.687948 GCATCATGTAGTATCGCACAGATT 59.312 41.667 0.00 0.00 40.66 2.40
5508 7112 6.799512 GCAGGTTGCTGATTGATAGTTAAAT 58.200 36.000 0.00 0.00 40.96 1.40
5541 7145 6.578944 GGTTGAACTAAAATGAACAACCCTT 58.421 36.000 13.65 0.00 46.24 3.95
5693 7298 1.004511 TGCCCACACATCACATCATCA 59.995 47.619 0.00 0.00 0.00 3.07
5696 7301 2.681344 CCCACACATCACATCATCACAG 59.319 50.000 0.00 0.00 0.00 3.66
5703 7308 4.934001 ACATCACATCATCACAGTTCTCAC 59.066 41.667 0.00 0.00 0.00 3.51
5704 7309 4.605640 TCACATCATCACAGTTCTCACA 57.394 40.909 0.00 0.00 0.00 3.58
5705 7310 5.156608 TCACATCATCACAGTTCTCACAT 57.843 39.130 0.00 0.00 0.00 3.21
5706 7311 4.933400 TCACATCATCACAGTTCTCACATG 59.067 41.667 0.00 0.00 0.00 3.21
5707 7312 3.688185 ACATCATCACAGTTCTCACATGC 59.312 43.478 0.00 0.00 0.00 4.06
5708 7313 2.703416 TCATCACAGTTCTCACATGCC 58.297 47.619 0.00 0.00 0.00 4.40
5709 7314 1.741706 CATCACAGTTCTCACATGCCC 59.258 52.381 0.00 0.00 0.00 5.36
5710 7315 0.764271 TCACAGTTCTCACATGCCCA 59.236 50.000 0.00 0.00 0.00 5.36
5711 7316 0.877071 CACAGTTCTCACATGCCCAC 59.123 55.000 0.00 0.00 0.00 4.61
5712 7317 0.250901 ACAGTTCTCACATGCCCACC 60.251 55.000 0.00 0.00 0.00 4.61
5713 7318 1.003355 AGTTCTCACATGCCCACCG 60.003 57.895 0.00 0.00 0.00 4.94
5714 7319 1.003839 GTTCTCACATGCCCACCGA 60.004 57.895 0.00 0.00 0.00 4.69
5715 7320 1.021390 GTTCTCACATGCCCACCGAG 61.021 60.000 0.00 0.00 0.00 4.63
5716 7321 2.124983 CTCACATGCCCACCGAGG 60.125 66.667 0.00 0.00 37.03 4.63
5717 7322 2.927856 TCACATGCCCACCGAGGT 60.928 61.111 0.00 0.00 34.66 3.85
5718 7323 2.747460 CACATGCCCACCGAGGTG 60.747 66.667 14.99 14.99 45.02 4.00
5719 7324 3.249189 ACATGCCCACCGAGGTGT 61.249 61.111 19.62 0.00 44.02 4.16
5720 7325 2.747460 CATGCCCACCGAGGTGTG 60.747 66.667 19.62 10.70 44.02 3.82
5721 7326 3.249189 ATGCCCACCGAGGTGTGT 61.249 61.111 19.62 1.58 44.02 3.72
5722 7327 3.551496 ATGCCCACCGAGGTGTGTG 62.551 63.158 19.62 9.72 44.02 3.82
5724 7329 4.248842 CCCACCGAGGTGTGTGCA 62.249 66.667 19.62 0.00 44.02 4.57
5725 7330 2.203139 CCACCGAGGTGTGTGCAA 60.203 61.111 19.62 0.00 44.02 4.08
5726 7331 2.542907 CCACCGAGGTGTGTGCAAC 61.543 63.158 19.62 0.00 44.02 4.17
5727 7332 2.587753 ACCGAGGTGTGTGCAACG 60.588 61.111 0.00 0.00 42.39 4.10
5728 7333 2.587753 CCGAGGTGTGTGCAACGT 60.588 61.111 0.00 0.00 42.39 3.99
5729 7334 2.594962 CCGAGGTGTGTGCAACGTC 61.595 63.158 0.00 0.00 42.39 4.34
5730 7335 1.591594 CGAGGTGTGTGCAACGTCT 60.592 57.895 7.80 2.41 42.39 4.18
5731 7336 1.821241 CGAGGTGTGTGCAACGTCTG 61.821 60.000 7.80 0.00 42.39 3.51
5742 7347 2.320805 CAACGTCTGCTTCATGGTTG 57.679 50.000 0.00 0.00 0.00 3.77
5743 7348 0.593128 AACGTCTGCTTCATGGTTGC 59.407 50.000 0.00 0.00 0.00 4.17
5744 7349 0.534877 ACGTCTGCTTCATGGTTGCA 60.535 50.000 0.00 0.38 35.30 4.08
5745 7350 0.592637 CGTCTGCTTCATGGTTGCAA 59.407 50.000 0.00 0.00 36.22 4.08
5746 7351 1.400629 CGTCTGCTTCATGGTTGCAAG 60.401 52.381 0.00 0.00 36.22 4.01
5747 7352 1.610522 GTCTGCTTCATGGTTGCAAGT 59.389 47.619 0.00 0.00 36.22 3.16
5748 7353 1.610038 TCTGCTTCATGGTTGCAAGTG 59.390 47.619 0.00 0.00 36.22 3.16
5749 7354 0.032403 TGCTTCATGGTTGCAAGTGC 59.968 50.000 0.00 0.00 42.50 4.40
5750 7355 0.316204 GCTTCATGGTTGCAAGTGCT 59.684 50.000 0.00 0.00 42.66 4.40
5751 7356 1.668047 GCTTCATGGTTGCAAGTGCTC 60.668 52.381 0.00 0.00 42.66 4.26
5752 7357 0.592637 TTCATGGTTGCAAGTGCTCG 59.407 50.000 0.00 0.00 42.66 5.03
5753 7358 1.443194 CATGGTTGCAAGTGCTCGC 60.443 57.895 0.00 0.00 42.66 5.03
5754 7359 1.601759 ATGGTTGCAAGTGCTCGCT 60.602 52.632 0.00 0.00 42.66 4.93
5755 7360 1.174712 ATGGTTGCAAGTGCTCGCTT 61.175 50.000 0.00 0.00 42.66 4.68
5756 7361 1.081840 GGTTGCAAGTGCTCGCTTC 60.082 57.895 0.00 0.00 42.66 3.86
5757 7362 1.081840 GTTGCAAGTGCTCGCTTCC 60.082 57.895 0.00 0.00 42.66 3.46
5758 7363 1.525765 TTGCAAGTGCTCGCTTCCA 60.526 52.632 4.69 0.00 42.66 3.53
5759 7364 1.100463 TTGCAAGTGCTCGCTTCCAA 61.100 50.000 4.69 0.00 42.66 3.53
5760 7365 1.208614 GCAAGTGCTCGCTTCCAAG 59.791 57.895 0.00 0.00 38.21 3.61
5761 7366 2.793010 GCAAGTGCTCGCTTCCAAGC 62.793 60.000 0.83 0.83 42.38 4.01
5780 7385 3.950397 AGCCACGTATGGATTTTTCTCA 58.050 40.909 0.00 0.00 44.30 3.27
5781 7386 4.331968 AGCCACGTATGGATTTTTCTCAA 58.668 39.130 0.00 0.00 44.30 3.02
5782 7387 4.156008 AGCCACGTATGGATTTTTCTCAAC 59.844 41.667 0.00 0.00 44.30 3.18
5783 7388 6.264838 AGCCACGTATGGATTTTTCTCAACA 61.265 40.000 0.00 0.00 44.30 3.33
5784 7389 7.525417 AGCCACGTATGGATTTTTCTCAACAT 61.525 38.462 0.00 0.00 44.30 2.71
5785 7390 8.925159 AGCCACGTATGGATTTTTCTCAACATT 61.925 37.037 0.00 0.00 44.30 2.71
5787 7392 8.519492 CACGTATGGATTTTTCTCAACATTTT 57.481 30.769 0.00 0.00 0.00 1.82
5788 7393 8.977505 CACGTATGGATTTTTCTCAACATTTTT 58.022 29.630 0.00 0.00 0.00 1.94
5789 7394 8.977505 ACGTATGGATTTTTCTCAACATTTTTG 58.022 29.630 0.00 0.00 0.00 2.44
5790 7395 8.977505 CGTATGGATTTTTCTCAACATTTTTGT 58.022 29.630 0.00 0.00 0.00 2.83
5793 7398 8.558973 TGGATTTTTCTCAACATTTTTGTTGT 57.441 26.923 16.02 0.00 46.55 3.32
5794 7399 8.449397 TGGATTTTTCTCAACATTTTTGTTGTG 58.551 29.630 16.02 14.11 46.55 3.33
5795 7400 8.663911 GGATTTTTCTCAACATTTTTGTTGTGA 58.336 29.630 16.02 15.81 46.55 3.58
5796 7401 9.476761 GATTTTTCTCAACATTTTTGTTGTGAC 57.523 29.630 18.02 7.48 45.70 3.67
5797 7402 7.953158 TTTTCTCAACATTTTTGTTGTGACA 57.047 28.000 18.02 12.02 45.70 3.58
5798 7403 7.953158 TTTCTCAACATTTTTGTTGTGACAA 57.047 28.000 18.02 13.81 45.70 3.18
5832 7437 6.408107 TTTTTCTAAAATAAGCACCCGGTT 57.592 33.333 0.00 0.00 36.62 4.44
5833 7438 5.379732 TTTCTAAAATAAGCACCCGGTTG 57.620 39.130 0.00 0.00 34.01 3.77
5834 7439 4.023726 TCTAAAATAAGCACCCGGTTGT 57.976 40.909 0.00 0.00 34.01 3.32
5835 7440 4.400120 TCTAAAATAAGCACCCGGTTGTT 58.600 39.130 0.00 0.00 35.74 2.83
5836 7441 3.653539 AAAATAAGCACCCGGTTGTTC 57.346 42.857 0.00 0.00 33.46 3.18
5837 7442 1.541379 AATAAGCACCCGGTTGTTCC 58.459 50.000 0.00 0.00 29.13 3.62
5838 7443 0.402504 ATAAGCACCCGGTTGTTCCA 59.597 50.000 0.00 0.00 34.01 3.53
5839 7444 0.535553 TAAGCACCCGGTTGTTCCAC 60.536 55.000 0.00 0.00 34.01 4.02
5840 7445 2.517402 GCACCCGGTTGTTCCACA 60.517 61.111 0.00 0.00 35.57 4.17
5841 7446 1.901464 GCACCCGGTTGTTCCACAT 60.901 57.895 0.00 0.00 35.57 3.21
5842 7447 1.862602 GCACCCGGTTGTTCCACATC 61.863 60.000 0.00 0.00 35.57 3.06
5843 7448 1.302192 ACCCGGTTGTTCCACATCG 60.302 57.895 0.00 0.00 35.57 3.84
5844 7449 1.004320 CCCGGTTGTTCCACATCGA 60.004 57.895 0.00 0.00 35.57 3.59
5845 7450 1.019278 CCCGGTTGTTCCACATCGAG 61.019 60.000 0.00 0.00 35.57 4.04
5846 7451 1.635663 CCGGTTGTTCCACATCGAGC 61.636 60.000 0.00 0.00 35.57 5.03
5847 7452 1.787847 GGTTGTTCCACATCGAGCG 59.212 57.895 0.00 0.00 35.97 5.03
5848 7453 0.949105 GGTTGTTCCACATCGAGCGT 60.949 55.000 0.00 0.00 35.97 5.07
5849 7454 0.438830 GTTGTTCCACATCGAGCGTC 59.561 55.000 0.00 0.00 0.00 5.19
5850 7455 1.006825 TTGTTCCACATCGAGCGTCG 61.007 55.000 0.00 1.67 42.10 5.12
5851 7456 1.443872 GTTCCACATCGAGCGTCGT 60.444 57.895 7.16 0.00 41.35 4.34
5852 7457 1.007336 GTTCCACATCGAGCGTCGTT 61.007 55.000 7.16 0.00 41.35 3.85
5853 7458 1.006825 TTCCACATCGAGCGTCGTTG 61.007 55.000 13.30 13.30 43.12 4.10
5855 7460 1.282248 CCACATCGAGCGTCGTTGTT 61.282 55.000 16.18 5.32 46.71 2.83
5856 7461 0.179275 CACATCGAGCGTCGTTGTTG 60.179 55.000 16.18 10.91 46.71 3.33
5857 7462 1.225475 CATCGAGCGTCGTTGTTGC 60.225 57.895 7.16 0.00 41.35 4.17
5858 7463 1.663388 ATCGAGCGTCGTTGTTGCA 60.663 52.632 7.16 0.00 41.35 4.08
5859 7464 1.218875 ATCGAGCGTCGTTGTTGCAA 61.219 50.000 0.00 0.00 41.35 4.08
5860 7465 1.011684 CGAGCGTCGTTGTTGCAAA 60.012 52.632 0.00 0.00 34.72 3.68
5861 7466 1.253044 CGAGCGTCGTTGTTGCAAAC 61.253 55.000 0.00 0.00 40.48 2.93
5876 7481 6.214205 GTTGCAAACCAAACACAATATCAG 57.786 37.500 0.00 0.00 42.21 2.90
5877 7482 5.528043 TGCAAACCAAACACAATATCAGT 57.472 34.783 0.00 0.00 0.00 3.41
5878 7483 5.288015 TGCAAACCAAACACAATATCAGTG 58.712 37.500 6.69 6.69 42.56 3.66
5879 7484 5.068329 TGCAAACCAAACACAATATCAGTGA 59.932 36.000 13.41 0.00 40.16 3.41
5880 7485 6.158598 GCAAACCAAACACAATATCAGTGAT 58.841 36.000 11.12 11.12 40.16 3.06
5881 7486 6.089820 GCAAACCAAACACAATATCAGTGATG 59.910 38.462 16.15 3.18 40.16 3.07
5882 7487 6.899393 AACCAAACACAATATCAGTGATGT 57.101 33.333 16.15 6.18 40.16 3.06
5883 7488 6.899393 ACCAAACACAATATCAGTGATGTT 57.101 33.333 16.15 12.50 40.16 2.71
5884 7489 6.680810 ACCAAACACAATATCAGTGATGTTG 58.319 36.000 30.24 30.24 43.48 3.33
5885 7490 6.094719 CCAAACACAATATCAGTGATGTTGG 58.905 40.000 32.98 26.00 42.62 3.77
5886 7491 5.902613 AACACAATATCAGTGATGTTGGG 57.097 39.130 31.81 31.81 45.61 4.12
5887 7492 4.272489 ACACAATATCAGTGATGTTGGGG 58.728 43.478 34.46 28.38 44.84 4.96
5888 7493 3.067180 CACAATATCAGTGATGTTGGGGC 59.933 47.826 32.98 0.00 42.62 5.80
5889 7494 2.624838 CAATATCAGTGATGTTGGGGCC 59.375 50.000 26.57 0.00 37.45 5.80
5890 7495 0.180171 TATCAGTGATGTTGGGGCCG 59.820 55.000 16.15 0.00 0.00 6.13
5891 7496 1.561769 ATCAGTGATGTTGGGGCCGA 61.562 55.000 4.39 0.00 0.00 5.54
5892 7497 2.040544 CAGTGATGTTGGGGCCGAC 61.041 63.158 0.00 0.00 0.00 4.79
5893 7498 3.124921 GTGATGTTGGGGCCGACG 61.125 66.667 0.00 0.00 33.16 5.12
5894 7499 3.315140 TGATGTTGGGGCCGACGA 61.315 61.111 0.00 0.00 33.16 4.20
5895 7500 2.511600 GATGTTGGGGCCGACGAG 60.512 66.667 0.00 0.00 33.16 4.18
5896 7501 4.778143 ATGTTGGGGCCGACGAGC 62.778 66.667 0.00 0.00 33.16 5.03
5907 7512 4.724602 GACGAGCAGAGCACCGCA 62.725 66.667 0.00 0.00 32.17 5.69
5908 7513 4.299547 ACGAGCAGAGCACCGCAA 62.300 61.111 0.00 0.00 32.17 4.85
5909 7514 3.485431 CGAGCAGAGCACCGCAAG 61.485 66.667 0.00 0.00 0.00 4.01
5910 7515 3.797546 GAGCAGAGCACCGCAAGC 61.798 66.667 0.00 0.00 0.00 4.01
5911 7516 4.631247 AGCAGAGCACCGCAAGCA 62.631 61.111 0.00 0.00 0.00 3.91
5912 7517 4.395583 GCAGAGCACCGCAAGCAC 62.396 66.667 0.00 0.00 0.00 4.40
5913 7518 4.081030 CAGAGCACCGCAAGCACG 62.081 66.667 0.00 0.00 0.00 5.34
5927 7532 2.126888 CACGGTTGCAACATCGCC 60.127 61.111 29.55 12.19 0.00 5.54
5928 7533 2.593148 ACGGTTGCAACATCGCCA 60.593 55.556 29.55 0.00 0.00 5.69
5929 7534 2.190170 ACGGTTGCAACATCGCCAA 61.190 52.632 29.55 0.00 0.00 4.52
5930 7535 1.212490 CGGTTGCAACATCGCCAAT 59.788 52.632 29.55 0.00 0.00 3.16
5931 7536 1.072116 CGGTTGCAACATCGCCAATG 61.072 55.000 29.55 5.04 41.48 2.82
5937 7542 2.876955 ACATCGCCAATGTTGCCG 59.123 55.556 0.00 0.00 46.73 5.69
5938 7543 1.673993 ACATCGCCAATGTTGCCGA 60.674 52.632 1.23 1.23 46.73 5.54
5939 7544 1.226379 CATCGCCAATGTTGCCGAC 60.226 57.895 0.72 0.00 32.07 4.79
5940 7545 2.749865 ATCGCCAATGTTGCCGACG 61.750 57.895 0.72 0.00 32.07 5.12
5941 7546 3.722295 CGCCAATGTTGCCGACGT 61.722 61.111 0.00 0.00 0.00 4.34
5942 7547 2.126888 GCCAATGTTGCCGACGTG 60.127 61.111 0.00 0.00 0.00 4.49
5943 7548 2.126888 CCAATGTTGCCGACGTGC 60.127 61.111 0.00 0.00 0.00 5.34
5944 7549 2.126888 CAATGTTGCCGACGTGCC 60.127 61.111 0.00 0.00 0.00 5.01
5945 7550 3.361977 AATGTTGCCGACGTGCCC 61.362 61.111 0.00 0.00 0.00 5.36
5954 7559 3.849953 GACGTGCCCGATCGCAAC 61.850 66.667 10.32 6.30 41.30 4.17
5955 7560 4.673298 ACGTGCCCGATCGCAACA 62.673 61.111 10.32 4.11 41.30 3.33
5956 7561 3.195002 CGTGCCCGATCGCAACAT 61.195 61.111 10.32 0.00 41.30 2.71
5957 7562 2.404789 GTGCCCGATCGCAACATG 59.595 61.111 10.32 0.00 41.30 3.21
5958 7563 2.823593 TGCCCGATCGCAACATGG 60.824 61.111 10.32 5.47 35.32 3.66
5959 7564 4.256090 GCCCGATCGCAACATGGC 62.256 66.667 10.32 12.36 0.00 4.40
5960 7565 2.514592 CCCGATCGCAACATGGCT 60.515 61.111 10.32 0.00 0.00 4.75
5961 7566 1.227527 CCCGATCGCAACATGGCTA 60.228 57.895 10.32 0.00 0.00 3.93
5962 7567 0.813610 CCCGATCGCAACATGGCTAA 60.814 55.000 10.32 0.00 0.00 3.09
5963 7568 1.229428 CCGATCGCAACATGGCTAAT 58.771 50.000 10.32 0.00 0.00 1.73
5964 7569 1.069703 CCGATCGCAACATGGCTAATG 60.070 52.381 10.32 0.00 42.48 1.90
5977 7582 6.017400 CATGGCTAATGTTGTGATTATCCC 57.983 41.667 0.00 0.00 0.00 3.85
5978 7583 5.387113 TGGCTAATGTTGTGATTATCCCT 57.613 39.130 0.00 0.00 0.00 4.20
5979 7584 5.132502 TGGCTAATGTTGTGATTATCCCTG 58.867 41.667 0.00 0.00 0.00 4.45
5980 7585 4.022849 GGCTAATGTTGTGATTATCCCTGC 60.023 45.833 0.00 0.00 0.00 4.85
5981 7586 4.580167 GCTAATGTTGTGATTATCCCTGCA 59.420 41.667 0.00 0.00 0.00 4.41
5982 7587 5.242393 GCTAATGTTGTGATTATCCCTGCAT 59.758 40.000 0.00 0.00 0.00 3.96
5983 7588 5.779529 AATGTTGTGATTATCCCTGCATC 57.220 39.130 0.00 0.00 0.00 3.91
5984 7589 4.233632 TGTTGTGATTATCCCTGCATCA 57.766 40.909 0.00 0.00 0.00 3.07
5985 7590 4.795469 TGTTGTGATTATCCCTGCATCAT 58.205 39.130 0.00 0.00 29.78 2.45
5986 7591 4.823442 TGTTGTGATTATCCCTGCATCATC 59.177 41.667 0.00 0.00 29.78 2.92
5987 7592 3.667360 TGTGATTATCCCTGCATCATCG 58.333 45.455 0.00 0.00 29.78 3.84
5988 7593 3.071457 TGTGATTATCCCTGCATCATCGT 59.929 43.478 0.00 0.00 29.78 3.73
5989 7594 3.681897 GTGATTATCCCTGCATCATCGTC 59.318 47.826 0.00 0.00 29.78 4.20
5990 7595 3.324556 TGATTATCCCTGCATCATCGTCA 59.675 43.478 0.00 0.00 0.00 4.35
5991 7596 3.391506 TTATCCCTGCATCATCGTCAG 57.608 47.619 0.00 0.00 0.00 3.51
5992 7597 1.126488 ATCCCTGCATCATCGTCAGT 58.874 50.000 0.00 0.00 0.00 3.41
5993 7598 0.176449 TCCCTGCATCATCGTCAGTG 59.824 55.000 0.00 0.00 0.00 3.66
5994 7599 0.107993 CCCTGCATCATCGTCAGTGT 60.108 55.000 0.00 0.00 0.00 3.55
5995 7600 1.676916 CCCTGCATCATCGTCAGTGTT 60.677 52.381 0.00 0.00 0.00 3.32
5996 7601 1.395954 CCTGCATCATCGTCAGTGTTG 59.604 52.381 0.00 0.00 0.00 3.33
5997 7602 0.798159 TGCATCATCGTCAGTGTTGC 59.202 50.000 0.00 0.00 40.78 4.17
5998 7603 0.798159 GCATCATCGTCAGTGTTGCA 59.202 50.000 4.76 0.00 40.34 4.08
5999 7604 1.201998 GCATCATCGTCAGTGTTGCAG 60.202 52.381 4.76 0.00 40.34 4.41
6000 7605 2.340337 CATCATCGTCAGTGTTGCAGA 58.660 47.619 0.00 0.00 0.00 4.26
6001 7606 1.783284 TCATCGTCAGTGTTGCAGAC 58.217 50.000 0.00 0.00 0.00 3.51
6002 7607 1.068434 TCATCGTCAGTGTTGCAGACA 59.932 47.619 4.20 1.43 33.80 3.41
6003 7608 2.071540 CATCGTCAGTGTTGCAGACAT 58.928 47.619 4.20 0.00 41.10 3.06
6004 7609 1.783284 TCGTCAGTGTTGCAGACATC 58.217 50.000 4.20 0.76 41.10 3.06
6005 7610 0.436150 CGTCAGTGTTGCAGACATCG 59.564 55.000 4.20 4.96 41.10 3.84
6006 7611 0.164647 GTCAGTGTTGCAGACATCGC 59.835 55.000 5.26 0.00 41.10 4.58
6007 7612 0.033920 TCAGTGTTGCAGACATCGCT 59.966 50.000 5.26 0.00 41.10 4.93
6008 7613 0.165295 CAGTGTTGCAGACATCGCTG 59.835 55.000 5.26 3.98 43.75 5.18
6009 7614 0.250038 AGTGTTGCAGACATCGCTGT 60.250 50.000 0.00 0.00 41.10 4.40
6010 7615 0.110509 GTGTTGCAGACATCGCTGTG 60.111 55.000 0.00 0.00 41.10 3.66
6011 7616 0.249826 TGTTGCAGACATCGCTGTGA 60.250 50.000 0.00 0.00 38.17 3.58
6012 7617 0.441533 GTTGCAGACATCGCTGTGAG 59.558 55.000 0.00 0.00 38.17 3.51
6013 7618 0.033920 TTGCAGACATCGCTGTGAGT 59.966 50.000 0.00 0.00 38.17 3.41
6014 7619 0.389037 TGCAGACATCGCTGTGAGTC 60.389 55.000 0.00 10.72 38.17 3.36
6015 7620 1.080995 GCAGACATCGCTGTGAGTCC 61.081 60.000 0.00 0.00 38.17 3.85
6016 7621 0.244721 CAGACATCGCTGTGAGTCCA 59.755 55.000 0.00 0.00 35.14 4.02
6017 7622 1.134877 CAGACATCGCTGTGAGTCCAT 60.135 52.381 0.00 0.00 35.14 3.41
6018 7623 1.134877 AGACATCGCTGTGAGTCCATG 60.135 52.381 0.00 3.20 35.14 3.66
6019 7624 0.107993 ACATCGCTGTGAGTCCATGG 60.108 55.000 4.97 4.97 33.22 3.66
6020 7625 1.153289 ATCGCTGTGAGTCCATGGC 60.153 57.895 6.96 2.00 0.00 4.40
6021 7626 2.599645 ATCGCTGTGAGTCCATGGCC 62.600 60.000 6.96 0.00 0.00 5.36
6022 7627 2.352422 GCTGTGAGTCCATGGCCA 59.648 61.111 8.56 8.56 0.00 5.36
6023 7628 2.042831 GCTGTGAGTCCATGGCCAC 61.043 63.158 8.16 18.73 0.00 5.01
6024 7629 1.377725 CTGTGAGTCCATGGCCACC 60.378 63.158 8.16 0.00 0.00 4.61
6025 7630 2.436646 GTGAGTCCATGGCCACCG 60.437 66.667 8.16 1.14 0.00 4.94
6026 7631 4.408821 TGAGTCCATGGCCACCGC 62.409 66.667 8.16 0.00 0.00 5.68
6041 7646 2.827190 CGCCCTGCAGCATGACAT 60.827 61.111 8.66 0.00 39.69 3.06
6042 7647 2.831366 CGCCCTGCAGCATGACATC 61.831 63.158 8.66 0.00 39.69 3.06
6043 7648 1.751544 GCCCTGCAGCATGACATCA 60.752 57.895 8.66 0.00 39.69 3.07
6044 7649 2.001361 GCCCTGCAGCATGACATCAC 62.001 60.000 8.66 0.00 39.69 3.06
6045 7650 0.678684 CCCTGCAGCATGACATCACA 60.679 55.000 8.66 0.00 39.69 3.58
6046 7651 0.733150 CCTGCAGCATGACATCACAG 59.267 55.000 8.66 0.00 39.69 3.66
6047 7652 0.098905 CTGCAGCATGACATCACAGC 59.901 55.000 0.00 1.01 39.69 4.40
6048 7653 0.606944 TGCAGCATGACATCACAGCA 60.607 50.000 0.00 2.06 39.69 4.41
6049 7654 0.524414 GCAGCATGACATCACAGCAA 59.476 50.000 0.00 0.00 39.69 3.91
6050 7655 1.068125 GCAGCATGACATCACAGCAAA 60.068 47.619 0.00 0.00 39.69 3.68
6051 7656 2.592194 CAGCATGACATCACAGCAAAC 58.408 47.619 0.00 0.00 39.69 2.93
6052 7657 1.542915 AGCATGACATCACAGCAAACC 59.457 47.619 0.00 0.00 34.05 3.27
6053 7658 1.270274 GCATGACATCACAGCAAACCA 59.730 47.619 0.00 0.00 32.52 3.67
6054 7659 2.288334 GCATGACATCACAGCAAACCAA 60.288 45.455 0.00 0.00 32.52 3.67
6055 7660 3.571571 CATGACATCACAGCAAACCAAG 58.428 45.455 0.00 0.00 0.00 3.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 1.895798 TCACGAGCCTGAAGACTCATT 59.104 47.619 0.00 0.00 32.98 2.57
3 4 1.476085 CTCACGAGCCTGAAGACTCAT 59.524 52.381 0.00 0.00 32.98 2.90
6 7 0.885196 GACTCACGAGCCTGAAGACT 59.115 55.000 0.00 0.00 0.00 3.24
7 8 0.455295 CGACTCACGAGCCTGAAGAC 60.455 60.000 0.00 0.00 45.77 3.01
8 9 0.889638 ACGACTCACGAGCCTGAAGA 60.890 55.000 0.00 0.00 45.77 2.87
9 10 0.455295 GACGACTCACGAGCCTGAAG 60.455 60.000 0.00 0.00 45.77 3.02
10 11 1.170290 TGACGACTCACGAGCCTGAA 61.170 55.000 0.00 0.00 45.77 3.02
11 12 1.599797 TGACGACTCACGAGCCTGA 60.600 57.895 0.00 0.00 45.77 3.86
12 13 1.442857 GTGACGACTCACGAGCCTG 60.443 63.158 0.00 0.00 45.77 4.85
13 14 2.955402 GTGACGACTCACGAGCCT 59.045 61.111 0.00 0.00 45.77 4.58
19 20 2.886859 CACTGGTGTGACGACTCAC 58.113 57.895 10.84 10.84 46.55 3.51
28 29 2.203139 TGGCGGTTCACTGGTGTG 60.203 61.111 0.53 0.00 45.07 3.82
29 30 2.111043 CTGGCGGTTCACTGGTGT 59.889 61.111 0.53 0.00 0.00 4.16
30 31 1.961277 GTCTGGCGGTTCACTGGTG 60.961 63.158 0.00 0.00 0.00 4.17
31 32 2.426023 GTCTGGCGGTTCACTGGT 59.574 61.111 0.00 0.00 0.00 4.00
32 33 1.961277 GTGTCTGGCGGTTCACTGG 60.961 63.158 13.80 0.00 0.00 4.00
33 34 0.603707 ATGTGTCTGGCGGTTCACTG 60.604 55.000 18.82 0.00 0.00 3.66
34 35 0.603707 CATGTGTCTGGCGGTTCACT 60.604 55.000 18.82 7.65 0.00 3.41
35 36 0.602638 TCATGTGTCTGGCGGTTCAC 60.603 55.000 14.05 14.05 0.00 3.18
36 37 0.320683 CTCATGTGTCTGGCGGTTCA 60.321 55.000 0.00 0.00 0.00 3.18
37 38 0.320771 ACTCATGTGTCTGGCGGTTC 60.321 55.000 0.00 0.00 0.00 3.62
38 39 0.320771 GACTCATGTGTCTGGCGGTT 60.321 55.000 18.40 0.00 34.39 4.44
39 40 1.293498 GACTCATGTGTCTGGCGGT 59.707 57.895 18.40 0.00 34.39 5.68
40 41 1.807165 CGACTCATGTGTCTGGCGG 60.807 63.158 21.88 5.99 35.00 6.13
41 42 2.447887 GCGACTCATGTGTCTGGCG 61.448 63.158 21.88 12.68 35.00 5.69
42 43 2.103042 GGCGACTCATGTGTCTGGC 61.103 63.158 21.88 21.29 35.00 4.85
43 44 0.320683 TTGGCGACTCATGTGTCTGG 60.321 55.000 21.88 11.13 35.00 3.86
44 45 1.662629 GATTGGCGACTCATGTGTCTG 59.337 52.381 21.88 16.72 35.00 3.51
45 46 1.552337 AGATTGGCGACTCATGTGTCT 59.448 47.619 21.88 6.37 35.00 3.41
46 47 2.015736 AGATTGGCGACTCATGTGTC 57.984 50.000 16.25 16.25 0.00 3.67
47 48 2.027745 AGAAGATTGGCGACTCATGTGT 60.028 45.455 0.00 0.00 0.00 3.72
48 49 2.350804 CAGAAGATTGGCGACTCATGTG 59.649 50.000 0.00 0.00 0.00 3.21
49 50 2.625737 CAGAAGATTGGCGACTCATGT 58.374 47.619 0.00 0.00 0.00 3.21
50 51 1.938577 CCAGAAGATTGGCGACTCATG 59.061 52.381 0.00 0.00 0.00 3.07
51 52 1.556911 ACCAGAAGATTGGCGACTCAT 59.443 47.619 0.00 0.00 42.18 2.90
52 53 0.976641 ACCAGAAGATTGGCGACTCA 59.023 50.000 0.00 0.00 42.18 3.41
53 54 1.363744 CACCAGAAGATTGGCGACTC 58.636 55.000 0.00 0.00 42.18 3.36
54 55 0.036010 CCACCAGAAGATTGGCGACT 60.036 55.000 0.00 0.00 42.18 4.18
55 56 1.026718 CCCACCAGAAGATTGGCGAC 61.027 60.000 0.00 0.00 42.18 5.19
56 57 1.299648 CCCACCAGAAGATTGGCGA 59.700 57.895 0.00 0.00 42.18 5.54
57 58 0.609131 AACCCACCAGAAGATTGGCG 60.609 55.000 0.00 0.00 42.18 5.69
58 59 0.890683 CAACCCACCAGAAGATTGGC 59.109 55.000 0.00 0.00 42.18 4.52
59 60 0.890683 GCAACCCACCAGAAGATTGG 59.109 55.000 0.00 0.00 44.09 3.16
60 61 0.890683 GGCAACCCACCAGAAGATTG 59.109 55.000 0.00 0.00 0.00 2.67
61 62 0.482446 TGGCAACCCACCAGAAGATT 59.518 50.000 0.00 0.00 35.79 2.40
62 63 0.482446 TTGGCAACCCACCAGAAGAT 59.518 50.000 0.00 0.00 41.97 2.40
63 64 0.482446 ATTGGCAACCCACCAGAAGA 59.518 50.000 0.00 0.00 41.97 2.87
64 65 0.604578 CATTGGCAACCCACCAGAAG 59.395 55.000 0.00 0.00 41.97 2.85
65 66 0.187117 TCATTGGCAACCCACCAGAA 59.813 50.000 0.00 0.00 41.97 3.02
66 67 0.187117 TTCATTGGCAACCCACCAGA 59.813 50.000 0.00 0.00 41.97 3.86
67 68 1.047002 TTTCATTGGCAACCCACCAG 58.953 50.000 0.00 0.00 41.97 4.00
68 69 0.755686 GTTTCATTGGCAACCCACCA 59.244 50.000 0.00 0.00 41.97 4.17
69 70 0.319469 CGTTTCATTGGCAACCCACC 60.319 55.000 0.00 0.00 41.97 4.61
70 71 0.943835 GCGTTTCATTGGCAACCCAC 60.944 55.000 0.00 0.00 41.97 4.61
71 72 1.365633 GCGTTTCATTGGCAACCCA 59.634 52.632 0.00 0.00 40.06 4.51
72 73 0.249657 TTGCGTTTCATTGGCAACCC 60.250 50.000 0.00 0.00 41.34 4.11
73 74 1.139163 CTTGCGTTTCATTGGCAACC 58.861 50.000 0.00 0.00 41.34 3.77
74 75 1.786579 GACTTGCGTTTCATTGGCAAC 59.213 47.619 0.00 0.00 41.34 4.17
75 76 1.269517 GGACTTGCGTTTCATTGGCAA 60.270 47.619 0.68 0.68 43.73 4.52
76 77 0.313672 GGACTTGCGTTTCATTGGCA 59.686 50.000 0.00 0.00 34.35 4.92
77 78 0.729140 CGGACTTGCGTTTCATTGGC 60.729 55.000 0.00 0.00 0.00 4.52
78 79 0.109781 CCGGACTTGCGTTTCATTGG 60.110 55.000 0.00 0.00 0.00 3.16
79 80 0.729140 GCCGGACTTGCGTTTCATTG 60.729 55.000 5.05 0.00 0.00 2.82
80 81 1.579429 GCCGGACTTGCGTTTCATT 59.421 52.632 5.05 0.00 0.00 2.57
81 82 2.332654 GGCCGGACTTGCGTTTCAT 61.333 57.895 5.05 0.00 0.00 2.57
82 83 2.975799 GGCCGGACTTGCGTTTCA 60.976 61.111 5.05 0.00 0.00 2.69
83 84 4.084888 CGGCCGGACTTGCGTTTC 62.085 66.667 20.10 0.00 0.00 2.78
89 90 2.040009 ATATGACCCGGCCGGACTTG 62.040 60.000 45.44 29.86 37.50 3.16
90 91 0.470456 TATATGACCCGGCCGGACTT 60.470 55.000 45.44 32.30 37.50 3.01
91 92 0.252103 ATATATGACCCGGCCGGACT 60.252 55.000 45.44 29.29 37.50 3.85
92 93 0.175073 GATATATGACCCGGCCGGAC 59.825 60.000 45.44 34.47 37.50 4.79
93 94 0.974010 GGATATATGACCCGGCCGGA 60.974 60.000 45.44 27.01 37.50 5.14
94 95 1.520666 GGATATATGACCCGGCCGG 59.479 63.158 37.99 37.99 37.81 6.13
95 96 1.141019 CGGATATATGACCCGGCCG 59.859 63.158 21.04 21.04 39.59 6.13
99 100 1.141019 CGGCCGGATATATGACCCG 59.859 63.158 20.10 0.05 42.64 5.28
100 101 1.520666 CCGGCCGGATATATGACCC 59.479 63.158 41.82 0.00 37.50 4.46
101 102 1.262640 ACCCGGCCGGATATATGACC 61.263 60.000 45.44 0.00 37.50 4.02
102 103 0.175073 GACCCGGCCGGATATATGAC 59.825 60.000 45.44 22.95 37.50 3.06
103 104 0.251877 TGACCCGGCCGGATATATGA 60.252 55.000 45.44 18.08 37.50 2.15
104 105 0.830648 ATGACCCGGCCGGATATATG 59.169 55.000 45.44 28.69 37.50 1.78
105 106 2.037144 GTATGACCCGGCCGGATATAT 58.963 52.381 45.44 30.88 37.50 0.86
106 107 1.477553 GTATGACCCGGCCGGATATA 58.522 55.000 45.44 31.87 37.50 0.86
107 108 1.262640 GGTATGACCCGGCCGGATAT 61.263 60.000 45.44 32.89 37.50 1.63
108 109 1.909781 GGTATGACCCGGCCGGATA 60.910 63.158 45.44 30.32 37.50 2.59
109 110 3.239253 GGTATGACCCGGCCGGAT 61.239 66.667 45.44 33.79 37.50 4.18
117 118 2.839162 TACCCCGCGGTATGACCC 60.839 66.667 26.12 0.00 42.18 4.46
131 132 1.270678 GCCAAGTGTCGGGGATATACC 60.271 57.143 0.00 0.00 38.08 2.73
132 133 1.604693 CGCCAAGTGTCGGGGATATAC 60.605 57.143 0.00 0.00 38.73 1.47
133 134 0.677288 CGCCAAGTGTCGGGGATATA 59.323 55.000 0.00 0.00 38.73 0.86
134 135 1.335132 ACGCCAAGTGTCGGGGATAT 61.335 55.000 0.00 0.00 39.66 1.63
135 136 1.985662 ACGCCAAGTGTCGGGGATA 60.986 57.895 0.00 0.00 39.66 2.59
136 137 3.319198 ACGCCAAGTGTCGGGGAT 61.319 61.111 0.00 0.00 39.66 3.85
137 138 4.308458 CACGCCAAGTGTCGGGGA 62.308 66.667 0.00 0.00 45.51 4.81
145 146 4.579384 CCACCACCCACGCCAAGT 62.579 66.667 0.00 0.00 0.00 3.16
172 173 3.266772 AGGAGGAAAACCACTGATGCATA 59.733 43.478 0.00 0.00 0.00 3.14
192 193 2.742372 CACCGCAAGTTCCCGAGG 60.742 66.667 0.00 0.00 0.00 4.63
301 310 2.031012 TCACCCAAGAGCGTGCAG 59.969 61.111 0.00 0.00 0.00 4.41
394 404 1.107538 CGAGGAAGACCCGCCATCTA 61.108 60.000 0.00 0.00 40.87 1.98
504 550 1.694150 ACAGCTCACTAACAGGCTCAA 59.306 47.619 0.00 0.00 32.30 3.02
505 551 1.342074 ACAGCTCACTAACAGGCTCA 58.658 50.000 0.00 0.00 32.30 4.26
611 686 8.023706 TCATGCATAGTGATAGAGTTATCGAAC 58.976 37.037 0.00 0.00 38.83 3.95
723 904 3.709653 TGGCTTATTCCACGACTCCTTAT 59.290 43.478 0.00 0.00 0.00 1.73
733 914 3.251004 CGGAAATAGCTGGCTTATTCCAC 59.749 47.826 24.78 10.37 38.44 4.02
800 1399 6.643770 CACATGCTCAAAATTTCTTACTTGCT 59.356 34.615 0.00 0.00 0.00 3.91
1069 1714 3.694043 AGAAGGGTTGAGAAGAGAAGC 57.306 47.619 0.00 0.00 0.00 3.86
1095 1740 1.294459 GTCTAGTTTTCGGGCCGGT 59.706 57.895 27.98 8.44 0.00 5.28
1193 1839 2.361610 ATGACGTCGTACCCCGGT 60.362 61.111 8.94 0.00 37.11 5.28
1244 1890 1.078201 CGCGCTGCATGAAGTAGTCA 61.078 55.000 5.56 0.00 41.67 3.41
1265 1911 2.740714 GAAGCGTGTGTCGATGCCC 61.741 63.158 0.00 0.00 42.86 5.36
1352 2001 6.373216 ACTTCTGTTTGTGTTTTGTACTAGCA 59.627 34.615 0.00 0.00 0.00 3.49
1353 2002 6.782150 ACTTCTGTTTGTGTTTTGTACTAGC 58.218 36.000 0.00 0.00 0.00 3.42
1364 2013 9.498307 CGAACTAAAATAAACTTCTGTTTGTGT 57.502 29.630 4.64 0.00 45.01 3.72
1365 2014 9.710979 TCGAACTAAAATAAACTTCTGTTTGTG 57.289 29.630 4.64 0.00 45.01 3.33
1366 2015 9.712359 GTCGAACTAAAATAAACTTCTGTTTGT 57.288 29.630 4.64 0.00 45.01 2.83
1367 2016 9.166126 GGTCGAACTAAAATAAACTTCTGTTTG 57.834 33.333 0.00 0.00 45.01 2.93
1450 2103 8.671384 AAATTATGTACCGAGCAGCTAATTAA 57.329 30.769 0.00 0.00 0.00 1.40
1454 2107 8.556194 CAAATAAATTATGTACCGAGCAGCTAA 58.444 33.333 0.00 0.00 0.00 3.09
1463 2116 9.781834 TCTTTCTTGCAAATAAATTATGTACCG 57.218 29.630 0.00 0.00 0.00 4.02
1488 2150 8.211629 AGGGAACAAATAGATACCACTTATGTC 58.788 37.037 0.00 0.00 0.00 3.06
1494 2156 7.750947 AGTTAGGGAACAAATAGATACCACT 57.249 36.000 0.00 0.00 38.10 4.00
1495 2157 8.044908 TCAAGTTAGGGAACAAATAGATACCAC 58.955 37.037 0.00 0.00 38.10 4.16
1496 2158 8.153221 TCAAGTTAGGGAACAAATAGATACCA 57.847 34.615 0.00 0.00 38.10 3.25
1497 2159 9.628500 ATTCAAGTTAGGGAACAAATAGATACC 57.372 33.333 0.00 0.00 38.10 2.73
1588 2259 5.833131 AGATACAACTTTGGTGGACATGTTT 59.167 36.000 0.00 0.00 0.00 2.83
1617 2327 9.237187 TGGAGCACATGACATAATTTAAGTAAA 57.763 29.630 0.00 0.00 0.00 2.01
1624 2334 4.275810 AGCTGGAGCACATGACATAATTT 58.724 39.130 0.00 0.00 45.16 1.82
1647 2358 8.736742 CATTTTATGTTTAGATTACAGCAAGCG 58.263 33.333 0.00 0.00 0.00 4.68
1788 2499 1.893808 CACAAGGACGCAAGCAGGT 60.894 57.895 0.00 0.00 45.62 4.00
2009 2726 6.702329 AGAAAGCTAGCTATGTAACAACTGT 58.298 36.000 19.70 0.00 0.00 3.55
2048 2765 1.001048 TGCAAGCTTCTCAACACATGC 60.001 47.619 0.00 0.00 0.00 4.06
2182 3123 1.134788 CCCATGACACCGTAGTCTTCC 60.135 57.143 0.00 0.00 39.27 3.46
2344 3285 7.989741 ACTAAGATGGACATCAACTTGGATTAG 59.010 37.037 14.16 11.65 38.42 1.73
2664 3608 6.528537 AATTGTAAAGCATCATGTGGCTAA 57.471 33.333 12.91 5.78 40.01 3.09
2728 3672 7.335627 TGTGAATAGTTATGGTGGTCCTTAAG 58.664 38.462 0.00 0.00 35.14 1.85
2845 3790 8.079211 TGGACTTAGCTTCACTACTGATTTAT 57.921 34.615 0.00 0.00 0.00 1.40
2847 3792 6.360370 TGGACTTAGCTTCACTACTGATTT 57.640 37.500 0.00 0.00 0.00 2.17
2959 3920 3.459598 AGGATGCTTGCTTCCACCTATTA 59.540 43.478 23.43 0.00 34.27 0.98
3215 4320 0.886490 TGCACACACACACACACACA 60.886 50.000 0.00 0.00 0.00 3.72
3216 4321 0.454285 GTGCACACACACACACACAC 60.454 55.000 13.17 0.00 46.61 3.82
3217 4322 1.872468 GTGCACACACACACACACA 59.128 52.632 13.17 0.00 46.61 3.72
3218 4323 4.763593 GTGCACACACACACACAC 57.236 55.556 13.17 0.00 46.61 3.82
3234 4339 3.602390 AAGATAAATTTATGCGCGCGT 57.398 38.095 32.35 30.61 0.00 6.01
3272 4377 5.876460 TGAATCATGTTTCACTGTGATCGAT 59.124 36.000 11.86 0.00 30.82 3.59
3460 4588 4.798907 CGTAAACTTGCATCGTATGAGAGT 59.201 41.667 0.00 0.00 0.00 3.24
3477 4605 8.667987 TTGCATCAGAATCAATAAACGTAAAC 57.332 30.769 0.00 0.00 0.00 2.01
3539 4667 5.323371 CCACAACATGGTTCCGATAAAAT 57.677 39.130 0.00 0.00 44.46 1.82
3646 4775 4.625972 AAACGAACTTTCAACGGATGTT 57.374 36.364 0.00 0.00 39.43 2.71
3649 4778 5.404667 GTCTCTAAACGAACTTTCAACGGAT 59.595 40.000 0.00 0.00 0.00 4.18
3732 4861 4.079253 AGGGACACACACAATGTAAATCC 58.921 43.478 0.00 0.00 40.64 3.01
3741 4870 0.107831 GCAGGTAGGGACACACACAA 59.892 55.000 0.00 0.00 0.00 3.33
3794 4923 4.081406 CCCAAGATCAATGGAGTTTGTCA 58.919 43.478 16.79 0.00 40.56 3.58
3904 5033 7.126061 TGTCTCTATCCAACCTAAAGATCAGA 58.874 38.462 0.00 0.00 0.00 3.27
3905 5034 7.353414 TGTCTCTATCCAACCTAAAGATCAG 57.647 40.000 0.00 0.00 0.00 2.90
3988 5117 5.389516 GCTGACCTTTACTAACACATGTTCG 60.390 44.000 0.00 0.00 39.31 3.95
4311 5440 6.095432 ACAGCCTCATAGTAATTAGCAGAG 57.905 41.667 0.00 0.00 0.00 3.35
4323 5452 7.865706 ACTATTTTGGTAAACAGCCTCATAG 57.134 36.000 0.00 0.00 0.00 2.23
4330 5459 5.174943 GTGCACAACTATTTTGGTAAACAGC 59.825 40.000 13.17 0.00 0.00 4.40
4331 5460 6.503524 AGTGCACAACTATTTTGGTAAACAG 58.496 36.000 21.04 0.00 37.36 3.16
4391 5520 3.003689 CCAAAGTGCAAACTAGGACACAG 59.996 47.826 0.00 0.00 35.47 3.66
4434 5563 4.905269 ACACGTTGTAGTTTCTTTCTTGC 58.095 39.130 0.00 0.00 0.00 4.01
4475 5604 4.021192 CCCTACTGCAAACCAACATTTCAT 60.021 41.667 0.00 0.00 0.00 2.57
4708 5837 9.093970 CGTTTCAGTAACAACTAATATGGATCA 57.906 33.333 0.00 0.00 36.50 2.92
4818 5951 8.451748 GTGATGACAAGGTTACTATCTTTTTCC 58.548 37.037 0.00 0.00 0.00 3.13
4819 5952 8.999431 TGTGATGACAAGGTTACTATCTTTTTC 58.001 33.333 0.00 0.00 0.00 2.29
4939 6538 7.413475 CCTTCGATAGGTACTTCAAATGATG 57.587 40.000 5.72 0.00 41.75 3.07
5016 6615 4.519906 AAACCCAAATCCATACGATCCT 57.480 40.909 0.00 0.00 0.00 3.24
5022 6621 8.151596 TCCTTAAAACAAAACCCAAATCCATAC 58.848 33.333 0.00 0.00 0.00 2.39
5123 6722 8.410141 GTCTTAGTAGCACAACATCTAGAAGAT 58.590 37.037 1.17 0.00 34.74 2.40
5130 6729 7.340743 AGACATAGTCTTAGTAGCACAACATCT 59.659 37.037 0.00 0.00 40.28 2.90
5207 6806 7.153985 TCAAAACATGATCCATCCTTGTTTTC 58.846 34.615 18.44 0.00 43.02 2.29
5242 6841 3.990469 ACATATATCGCGCTTCTTTCCAG 59.010 43.478 5.56 0.00 0.00 3.86
5356 6956 5.424121 AGCTGTTTTTCTATGTGACACAC 57.576 39.130 11.22 1.42 34.56 3.82
5508 7112 8.349983 GTTCATTTTAGTTCAACCTCTTGCTAA 58.650 33.333 0.00 0.00 0.00 3.09
5604 7209 5.782047 TGGATTTTGTTGAATCAAGCGATT 58.218 33.333 0.00 0.00 44.75 3.34
5693 7298 0.250901 GGTGGGCATGTGAGAACTGT 60.251 55.000 0.00 0.00 0.00 3.55
5696 7301 1.003839 TCGGTGGGCATGTGAGAAC 60.004 57.895 0.00 0.00 0.00 3.01
5710 7315 2.587753 CGTTGCACACACCTCGGT 60.588 61.111 0.00 0.00 0.00 4.69
5711 7316 2.587753 ACGTTGCACACACCTCGG 60.588 61.111 0.00 0.00 0.00 4.63
5712 7317 1.591594 AGACGTTGCACACACCTCG 60.592 57.895 0.00 0.00 0.00 4.63
5713 7318 1.934463 CAGACGTTGCACACACCTC 59.066 57.895 0.00 0.00 0.00 3.85
5714 7319 4.124910 CAGACGTTGCACACACCT 57.875 55.556 0.00 0.00 0.00 4.00
5723 7328 1.664016 GCAACCATGAAGCAGACGTTG 60.664 52.381 0.00 0.00 34.98 4.10
5724 7329 0.593128 GCAACCATGAAGCAGACGTT 59.407 50.000 0.00 0.00 0.00 3.99
5725 7330 0.534877 TGCAACCATGAAGCAGACGT 60.535 50.000 0.00 0.00 33.75 4.34
5726 7331 0.592637 TTGCAACCATGAAGCAGACG 59.407 50.000 0.00 0.00 39.72 4.18
5727 7332 1.610522 ACTTGCAACCATGAAGCAGAC 59.389 47.619 0.00 0.00 39.72 3.51
5728 7333 1.610038 CACTTGCAACCATGAAGCAGA 59.390 47.619 0.00 0.00 39.72 4.26
5729 7334 1.933500 GCACTTGCAACCATGAAGCAG 60.934 52.381 0.00 0.00 39.72 4.24
5730 7335 0.032403 GCACTTGCAACCATGAAGCA 59.968 50.000 0.00 0.00 41.59 3.91
5731 7336 0.316204 AGCACTTGCAACCATGAAGC 59.684 50.000 3.62 0.00 45.16 3.86
5732 7337 1.400629 CGAGCACTTGCAACCATGAAG 60.401 52.381 3.62 0.00 45.16 3.02
5733 7338 0.592637 CGAGCACTTGCAACCATGAA 59.407 50.000 3.62 0.00 45.16 2.57
5734 7339 1.855213 GCGAGCACTTGCAACCATGA 61.855 55.000 3.62 0.00 45.16 3.07
5735 7340 1.443194 GCGAGCACTTGCAACCATG 60.443 57.895 3.62 0.00 45.16 3.66
5736 7341 1.174712 AAGCGAGCACTTGCAACCAT 61.175 50.000 12.31 0.00 45.16 3.55
5737 7342 1.785041 GAAGCGAGCACTTGCAACCA 61.785 55.000 12.31 0.00 45.16 3.67
5738 7343 1.081840 GAAGCGAGCACTTGCAACC 60.082 57.895 12.31 0.00 45.16 3.77
5739 7344 1.081840 GGAAGCGAGCACTTGCAAC 60.082 57.895 12.31 5.43 45.16 4.17
5740 7345 1.525765 TGGAAGCGAGCACTTGCAA 60.526 52.632 12.31 0.00 43.85 4.08
5741 7346 1.509644 CTTGGAAGCGAGCACTTGCA 61.510 55.000 12.31 4.61 44.93 4.08
5742 7347 1.208614 CTTGGAAGCGAGCACTTGC 59.791 57.895 1.35 1.35 38.38 4.01
5743 7348 1.208614 GCTTGGAAGCGAGCACTTG 59.791 57.895 0.00 0.00 42.88 3.16
5744 7349 3.660621 GCTTGGAAGCGAGCACTT 58.339 55.556 0.00 0.00 42.88 3.16
5753 7358 2.332063 ATCCATACGTGGCTTGGAAG 57.668 50.000 13.13 0.00 45.63 3.46
5754 7359 2.799126 AATCCATACGTGGCTTGGAA 57.201 45.000 13.13 1.45 45.63 3.53
5755 7360 2.799126 AAATCCATACGTGGCTTGGA 57.201 45.000 11.96 11.96 45.63 3.53
5756 7361 3.443681 AGAAAAATCCATACGTGGCTTGG 59.556 43.478 0.00 0.00 45.63 3.61
5757 7362 4.155826 TGAGAAAAATCCATACGTGGCTTG 59.844 41.667 0.00 0.00 45.63 4.01
5758 7363 4.331968 TGAGAAAAATCCATACGTGGCTT 58.668 39.130 0.00 0.00 45.63 4.35
5759 7364 3.950397 TGAGAAAAATCCATACGTGGCT 58.050 40.909 0.00 0.00 45.63 4.75
5760 7365 4.083003 TGTTGAGAAAAATCCATACGTGGC 60.083 41.667 0.00 0.00 45.63 5.01
5762 7367 8.519492 AAAATGTTGAGAAAAATCCATACGTG 57.481 30.769 0.00 0.00 0.00 4.49
5763 7368 8.977505 CAAAAATGTTGAGAAAAATCCATACGT 58.022 29.630 0.00 0.00 0.00 3.57
5764 7369 8.977505 ACAAAAATGTTGAGAAAAATCCATACG 58.022 29.630 0.00 0.00 0.00 3.06
5809 7414 6.183360 ACAACCGGGTGCTTATTTTAGAAAAA 60.183 34.615 22.38 0.00 0.00 1.94
5810 7415 5.302313 ACAACCGGGTGCTTATTTTAGAAAA 59.698 36.000 22.38 0.00 0.00 2.29
5811 7416 4.828387 ACAACCGGGTGCTTATTTTAGAAA 59.172 37.500 22.38 0.00 0.00 2.52
5812 7417 4.400120 ACAACCGGGTGCTTATTTTAGAA 58.600 39.130 22.38 0.00 0.00 2.10
5813 7418 4.023726 ACAACCGGGTGCTTATTTTAGA 57.976 40.909 22.38 0.00 0.00 2.10
5814 7419 4.380128 GGAACAACCGGGTGCTTATTTTAG 60.380 45.833 22.38 0.00 0.00 1.85
5815 7420 3.506844 GGAACAACCGGGTGCTTATTTTA 59.493 43.478 22.38 0.00 0.00 1.52
5816 7421 2.297880 GGAACAACCGGGTGCTTATTTT 59.702 45.455 22.38 4.61 0.00 1.82
5817 7422 1.890489 GGAACAACCGGGTGCTTATTT 59.110 47.619 22.38 5.51 0.00 1.40
5818 7423 1.202952 TGGAACAACCGGGTGCTTATT 60.203 47.619 22.38 5.98 42.61 1.40
5819 7424 0.402504 TGGAACAACCGGGTGCTTAT 59.597 50.000 22.38 2.83 42.61 1.73
5820 7425 0.535553 GTGGAACAACCGGGTGCTTA 60.536 55.000 22.38 0.00 44.16 3.09
5821 7426 1.826487 GTGGAACAACCGGGTGCTT 60.826 57.895 22.38 13.45 44.16 3.91
5822 7427 2.203294 GTGGAACAACCGGGTGCT 60.203 61.111 22.38 7.51 44.16 4.40
5833 7438 1.007336 AACGACGCTCGATGTGGAAC 61.007 55.000 13.06 0.00 43.74 3.62
5834 7439 1.006825 CAACGACGCTCGATGTGGAA 61.007 55.000 13.06 0.00 43.74 3.53
5835 7440 1.443702 CAACGACGCTCGATGTGGA 60.444 57.895 13.06 0.00 43.74 4.02
5836 7441 3.072598 CAACGACGCTCGATGTGG 58.927 61.111 13.06 0.00 43.74 4.17
5839 7444 1.225475 GCAACAACGACGCTCGATG 60.225 57.895 13.06 13.13 46.11 3.84
5840 7445 1.218875 TTGCAACAACGACGCTCGAT 61.219 50.000 13.06 0.19 43.74 3.59
5841 7446 1.422179 TTTGCAACAACGACGCTCGA 61.422 50.000 0.00 0.00 43.74 4.04
5842 7447 1.011684 TTTGCAACAACGACGCTCG 60.012 52.632 0.00 5.97 46.93 5.03
5843 7448 0.928451 GGTTTGCAACAACGACGCTC 60.928 55.000 0.00 0.00 0.00 5.03
5844 7449 1.063488 GGTTTGCAACAACGACGCT 59.937 52.632 0.00 0.00 0.00 5.07
5845 7450 0.798771 TTGGTTTGCAACAACGACGC 60.799 50.000 0.00 0.00 0.00 5.19
5846 7451 1.319079 GTTTGGTTTGCAACAACGACG 59.681 47.619 0.00 0.00 0.00 5.12
5847 7452 2.091432 GTGTTTGGTTTGCAACAACGAC 59.909 45.455 0.00 0.00 34.70 4.34
5848 7453 2.288213 TGTGTTTGGTTTGCAACAACGA 60.288 40.909 0.00 0.00 34.70 3.85
5849 7454 2.061773 TGTGTTTGGTTTGCAACAACG 58.938 42.857 0.00 0.00 34.70 4.10
5850 7455 4.676849 ATTGTGTTTGGTTTGCAACAAC 57.323 36.364 0.00 0.00 34.70 3.32
5851 7456 6.108687 TGATATTGTGTTTGGTTTGCAACAA 58.891 32.000 0.00 0.00 34.70 2.83
5852 7457 5.664457 TGATATTGTGTTTGGTTTGCAACA 58.336 33.333 0.00 0.00 0.00 3.33
5853 7458 5.752955 ACTGATATTGTGTTTGGTTTGCAAC 59.247 36.000 0.00 0.00 0.00 4.17
5854 7459 5.752472 CACTGATATTGTGTTTGGTTTGCAA 59.248 36.000 0.00 0.00 0.00 4.08
5855 7460 5.068329 TCACTGATATTGTGTTTGGTTTGCA 59.932 36.000 8.86 0.00 36.83 4.08
5856 7461 5.527951 TCACTGATATTGTGTTTGGTTTGC 58.472 37.500 8.86 0.00 36.83 3.68
5857 7462 7.147312 ACATCACTGATATTGTGTTTGGTTTG 58.853 34.615 8.86 0.00 36.83 2.93
5858 7463 7.288810 ACATCACTGATATTGTGTTTGGTTT 57.711 32.000 8.86 0.00 36.83 3.27
5859 7464 6.899393 ACATCACTGATATTGTGTTTGGTT 57.101 33.333 8.86 0.00 36.83 3.67
5860 7465 6.294675 CCAACATCACTGATATTGTGTTTGGT 60.295 38.462 8.82 11.72 36.85 3.67
5861 7466 6.094719 CCAACATCACTGATATTGTGTTTGG 58.905 40.000 8.82 16.16 36.12 3.28
5862 7467 6.094719 CCCAACATCACTGATATTGTGTTTG 58.905 40.000 8.82 9.85 36.83 2.93
5863 7468 5.185635 CCCCAACATCACTGATATTGTGTTT 59.814 40.000 8.82 1.50 36.83 2.83
5864 7469 4.706476 CCCCAACATCACTGATATTGTGTT 59.294 41.667 8.82 0.26 36.83 3.32
5865 7470 4.272489 CCCCAACATCACTGATATTGTGT 58.728 43.478 8.82 0.00 36.83 3.72
5866 7471 3.067180 GCCCCAACATCACTGATATTGTG 59.933 47.826 8.82 0.00 36.82 3.33
5867 7472 3.290710 GCCCCAACATCACTGATATTGT 58.709 45.455 8.82 0.00 25.79 2.71
5868 7473 2.624838 GGCCCCAACATCACTGATATTG 59.375 50.000 3.38 3.38 0.00 1.90
5869 7474 2.749466 CGGCCCCAACATCACTGATATT 60.749 50.000 0.00 0.00 0.00 1.28
5870 7475 1.202806 CGGCCCCAACATCACTGATAT 60.203 52.381 0.00 0.00 0.00 1.63
5871 7476 0.180171 CGGCCCCAACATCACTGATA 59.820 55.000 0.00 0.00 0.00 2.15
5872 7477 1.077501 CGGCCCCAACATCACTGAT 60.078 57.895 0.00 0.00 0.00 2.90
5873 7478 2.220586 TCGGCCCCAACATCACTGA 61.221 57.895 0.00 0.00 0.00 3.41
5874 7479 2.040544 GTCGGCCCCAACATCACTG 61.041 63.158 0.00 0.00 0.00 3.66
5875 7480 2.351276 GTCGGCCCCAACATCACT 59.649 61.111 0.00 0.00 0.00 3.41
5876 7481 3.124921 CGTCGGCCCCAACATCAC 61.125 66.667 0.00 0.00 0.00 3.06
5877 7482 3.309436 CTCGTCGGCCCCAACATCA 62.309 63.158 0.00 0.00 0.00 3.07
5878 7483 2.511600 CTCGTCGGCCCCAACATC 60.512 66.667 0.00 0.00 0.00 3.06
5879 7484 4.778143 GCTCGTCGGCCCCAACAT 62.778 66.667 0.00 0.00 0.00 2.71
5890 7495 4.724602 TGCGGTGCTCTGCTCGTC 62.725 66.667 19.55 0.00 45.38 4.20
5891 7496 4.299547 TTGCGGTGCTCTGCTCGT 62.300 61.111 19.55 0.00 45.38 4.18
5892 7497 3.485431 CTTGCGGTGCTCTGCTCG 61.485 66.667 19.55 7.56 45.38 5.03
5893 7498 3.797546 GCTTGCGGTGCTCTGCTC 61.798 66.667 19.55 6.29 45.38 4.26
5894 7499 4.631247 TGCTTGCGGTGCTCTGCT 62.631 61.111 19.55 0.00 45.38 4.24
5895 7500 4.395583 GTGCTTGCGGTGCTCTGC 62.396 66.667 12.66 12.66 45.37 4.26
5896 7501 4.081030 CGTGCTTGCGGTGCTCTG 62.081 66.667 0.00 0.00 0.00 3.35
5910 7515 2.126888 GGCGATGTTGCAACCGTG 60.127 61.111 26.14 15.95 36.28 4.94
5911 7516 1.523154 ATTGGCGATGTTGCAACCGT 61.523 50.000 26.14 15.17 36.28 4.83
5912 7517 1.072116 CATTGGCGATGTTGCAACCG 61.072 55.000 26.14 22.61 36.28 4.44
5913 7518 0.038343 ACATTGGCGATGTTGCAACC 60.038 50.000 26.14 11.47 46.80 3.77
5914 7519 3.495124 ACATTGGCGATGTTGCAAC 57.505 47.368 22.83 22.83 46.80 4.17
5926 7531 2.126888 GCACGTCGGCAACATTGG 60.127 61.111 0.00 0.00 0.00 3.16
5927 7532 2.126888 GGCACGTCGGCAACATTG 60.127 61.111 0.00 0.00 40.76 2.82
5928 7533 3.361977 GGGCACGTCGGCAACATT 61.362 61.111 12.19 0.00 43.60 2.71
5937 7542 3.849953 GTTGCGATCGGGCACGTC 61.850 66.667 18.30 4.38 43.82 4.34
5938 7543 3.950794 ATGTTGCGATCGGGCACGT 62.951 57.895 18.30 0.00 43.82 4.49
5939 7544 3.195002 ATGTTGCGATCGGGCACG 61.195 61.111 18.30 0.00 43.82 5.34
5940 7545 2.404789 CATGTTGCGATCGGGCAC 59.595 61.111 18.30 0.00 43.82 5.01
5941 7546 2.823593 CCATGTTGCGATCGGGCA 60.824 61.111 18.30 3.96 42.12 5.36
5942 7547 4.256090 GCCATGTTGCGATCGGGC 62.256 66.667 18.30 15.72 0.00 6.13
5943 7548 0.813610 TTAGCCATGTTGCGATCGGG 60.814 55.000 18.30 9.36 36.02 5.14
5944 7549 1.069703 CATTAGCCATGTTGCGATCGG 60.070 52.381 18.30 0.00 36.02 4.18
5945 7550 1.599071 ACATTAGCCATGTTGCGATCG 59.401 47.619 11.69 11.69 44.40 3.69
5953 7558 8.606869 CAGGGATAATCACAACATTAGCCATGT 61.607 40.741 11.95 0.00 45.27 3.21
5954 7559 5.771666 AGGGATAATCACAACATTAGCCATG 59.228 40.000 9.16 0.00 43.79 3.66
5955 7560 5.771666 CAGGGATAATCACAACATTAGCCAT 59.228 40.000 9.16 0.21 43.79 4.40
5956 7561 5.132502 CAGGGATAATCACAACATTAGCCA 58.867 41.667 9.16 0.00 43.79 4.75
5957 7562 4.022849 GCAGGGATAATCACAACATTAGCC 60.023 45.833 0.00 0.00 42.04 3.93
5958 7563 4.580167 TGCAGGGATAATCACAACATTAGC 59.420 41.667 0.00 0.00 0.00 3.09
5959 7564 6.487668 TGATGCAGGGATAATCACAACATTAG 59.512 38.462 0.00 0.00 0.00 1.73
5960 7565 6.363882 TGATGCAGGGATAATCACAACATTA 58.636 36.000 0.00 0.00 0.00 1.90
5961 7566 5.202765 TGATGCAGGGATAATCACAACATT 58.797 37.500 0.00 0.00 0.00 2.71
5962 7567 4.795469 TGATGCAGGGATAATCACAACAT 58.205 39.130 0.00 0.00 0.00 2.71
5963 7568 4.233632 TGATGCAGGGATAATCACAACA 57.766 40.909 0.00 0.00 0.00 3.33
5964 7569 4.083643 CGATGATGCAGGGATAATCACAAC 60.084 45.833 0.00 0.00 33.37 3.32
5965 7570 4.067192 CGATGATGCAGGGATAATCACAA 58.933 43.478 0.00 0.00 33.37 3.33
5966 7571 3.071457 ACGATGATGCAGGGATAATCACA 59.929 43.478 0.00 0.00 33.37 3.58
5967 7572 3.668447 ACGATGATGCAGGGATAATCAC 58.332 45.455 0.00 0.00 33.37 3.06
5968 7573 3.324556 TGACGATGATGCAGGGATAATCA 59.675 43.478 0.00 0.00 34.96 2.57
5969 7574 3.930336 TGACGATGATGCAGGGATAATC 58.070 45.455 0.00 0.00 0.00 1.75
5970 7575 3.326006 ACTGACGATGATGCAGGGATAAT 59.674 43.478 0.00 0.00 34.05 1.28
5971 7576 2.700371 ACTGACGATGATGCAGGGATAA 59.300 45.455 0.00 0.00 34.05 1.75
5972 7577 2.036346 CACTGACGATGATGCAGGGATA 59.964 50.000 0.00 0.00 35.07 2.59
5973 7578 1.126488 ACTGACGATGATGCAGGGAT 58.874 50.000 0.00 0.00 34.05 3.85
5974 7579 0.176449 CACTGACGATGATGCAGGGA 59.824 55.000 0.00 0.00 35.07 4.20
5975 7580 0.107993 ACACTGACGATGATGCAGGG 60.108 55.000 0.00 0.00 38.95 4.45
5976 7581 1.395954 CAACACTGACGATGATGCAGG 59.604 52.381 0.00 0.00 34.05 4.85
5977 7582 1.201998 GCAACACTGACGATGATGCAG 60.202 52.381 0.00 0.00 43.28 4.41
5978 7583 0.798159 GCAACACTGACGATGATGCA 59.202 50.000 0.00 0.00 43.28 3.96
5979 7584 0.798159 TGCAACACTGACGATGATGC 59.202 50.000 0.00 0.79 43.86 3.91
5980 7585 2.093310 GTCTGCAACACTGACGATGATG 59.907 50.000 0.00 0.00 37.47 3.07
5981 7586 2.341257 GTCTGCAACACTGACGATGAT 58.659 47.619 0.00 0.00 37.47 2.45
5982 7587 1.783284 GTCTGCAACACTGACGATGA 58.217 50.000 0.00 0.00 37.47 2.92
5987 7592 0.164647 GCGATGTCTGCAACACTGAC 59.835 55.000 4.23 0.52 44.99 3.51
5988 7593 0.033920 AGCGATGTCTGCAACACTGA 59.966 50.000 4.23 0.00 41.75 3.41
5989 7594 0.165295 CAGCGATGTCTGCAACACTG 59.835 55.000 0.00 4.56 41.75 3.66
5990 7595 0.250038 ACAGCGATGTCTGCAACACT 60.250 50.000 0.00 0.00 41.75 3.55
5991 7596 0.110509 CACAGCGATGTCTGCAACAC 60.111 55.000 1.77 0.00 41.75 3.32
5992 7597 0.249826 TCACAGCGATGTCTGCAACA 60.250 50.000 1.77 4.56 43.51 3.33
5993 7598 0.441533 CTCACAGCGATGTCTGCAAC 59.558 55.000 1.77 0.00 37.59 4.17
5994 7599 0.033920 ACTCACAGCGATGTCTGCAA 59.966 50.000 1.77 0.00 37.59 4.08
5995 7600 0.389037 GACTCACAGCGATGTCTGCA 60.389 55.000 1.77 0.00 37.59 4.41
5996 7601 1.080995 GGACTCACAGCGATGTCTGC 61.081 60.000 1.77 0.00 37.59 4.26
5997 7602 0.244721 TGGACTCACAGCGATGTCTG 59.755 55.000 1.77 1.69 39.86 3.51
5998 7603 1.134877 CATGGACTCACAGCGATGTCT 60.135 52.381 1.77 0.00 0.00 3.41
5999 7604 1.284657 CATGGACTCACAGCGATGTC 58.715 55.000 1.77 0.00 0.00 3.06
6000 7605 0.107993 CCATGGACTCACAGCGATGT 60.108 55.000 5.56 0.00 0.00 3.06
6001 7606 1.434622 GCCATGGACTCACAGCGATG 61.435 60.000 18.40 0.00 0.00 3.84
6002 7607 1.153289 GCCATGGACTCACAGCGAT 60.153 57.895 18.40 0.00 0.00 4.58
6003 7608 2.265739 GCCATGGACTCACAGCGA 59.734 61.111 18.40 0.00 0.00 4.93
6004 7609 2.821366 GGCCATGGACTCACAGCG 60.821 66.667 18.40 0.00 0.00 5.18
6005 7610 2.042831 GTGGCCATGGACTCACAGC 61.043 63.158 21.02 0.00 0.00 4.40
6006 7611 1.377725 GGTGGCCATGGACTCACAG 60.378 63.158 21.02 0.00 32.29 3.66
6007 7612 2.756400 GGTGGCCATGGACTCACA 59.244 61.111 21.02 4.28 32.29 3.58
6008 7613 2.436646 CGGTGGCCATGGACTCAC 60.437 66.667 21.02 19.70 0.00 3.51
6009 7614 4.408821 GCGGTGGCCATGGACTCA 62.409 66.667 21.02 8.96 0.00 3.41
6024 7629 2.827190 ATGTCATGCTGCAGGGCG 60.827 61.111 17.12 0.00 34.52 6.13
6025 7630 1.751544 TGATGTCATGCTGCAGGGC 60.752 57.895 17.12 12.49 0.00 5.19
6026 7631 0.678684 TGTGATGTCATGCTGCAGGG 60.679 55.000 17.12 6.11 0.00 4.45
6027 7632 0.733150 CTGTGATGTCATGCTGCAGG 59.267 55.000 17.12 8.18 0.00 4.85
6028 7633 0.098905 GCTGTGATGTCATGCTGCAG 59.901 55.000 10.11 10.11 0.00 4.41
6029 7634 0.606944 TGCTGTGATGTCATGCTGCA 60.607 50.000 4.13 4.13 32.30 4.41
6030 7635 0.524414 TTGCTGTGATGTCATGCTGC 59.476 50.000 0.00 0.00 32.30 5.25
6031 7636 2.592194 GTTTGCTGTGATGTCATGCTG 58.408 47.619 0.00 0.00 32.30 4.41
6032 7637 1.542915 GGTTTGCTGTGATGTCATGCT 59.457 47.619 0.00 0.00 32.30 3.79
6033 7638 1.270274 TGGTTTGCTGTGATGTCATGC 59.730 47.619 0.00 4.69 0.00 4.06
6034 7639 3.571571 CTTGGTTTGCTGTGATGTCATG 58.428 45.455 0.00 0.00 0.00 3.07
6035 7640 3.928727 CTTGGTTTGCTGTGATGTCAT 57.071 42.857 0.00 0.00 0.00 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.