Multiple sequence alignment - TraesCS1D01G423200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G423200 chr1D 100.000 3192 0 0 1 3192 478293803 478290612 0.000000e+00 5895.0
1 TraesCS1D01G423200 chr1D 98.077 52 1 0 2830 2881 478290922 478290871 1.220000e-14 91.6
2 TraesCS1D01G423200 chr1D 100.000 31 0 0 2853 2883 484195007 484194977 1.240000e-04 58.4
3 TraesCS1D01G423200 chr1A 89.533 2379 127 60 201 2552 574500549 574498266 0.000000e+00 2902.0
4 TraesCS1D01G423200 chr1A 87.611 452 39 10 192 636 574502689 574502248 2.840000e-140 508.0
5 TraesCS1D01G423200 chr1A 94.258 209 4 5 2990 3190 574498070 574497862 2.390000e-81 313.0
6 TraesCS1D01G423200 chr1A 94.444 90 5 0 2907 2996 551437932 551438021 4.290000e-29 139.0
7 TraesCS1D01G423200 chr1A 88.889 45 2 2 388 432 574502537 574502496 6.000000e-03 52.8
8 TraesCS1D01G423200 chr1B 92.616 1774 79 14 190 1937 666080605 666078858 0.000000e+00 2503.0
9 TraesCS1D01G423200 chr1B 79.057 721 70 35 1942 2618 666078822 666078139 1.370000e-113 420.0
10 TraesCS1D01G423200 chr1B 96.569 204 3 4 2990 3192 666077989 666077789 5.100000e-88 335.0
11 TraesCS1D01G423200 chr1B 93.182 44 2 1 390 432 666080448 666080405 2.660000e-06 63.9
12 TraesCS1D01G423200 chr3D 82.121 660 89 17 1265 1908 302947484 302948130 3.620000e-149 538.0
13 TraesCS1D01G423200 chr3B 78.360 878 125 32 1059 1908 418440123 418439283 2.840000e-140 508.0
14 TraesCS1D01G423200 chr3A 77.753 890 121 37 1059 1908 431741156 431740304 2.880000e-130 475.0
15 TraesCS1D01G423200 chr3A 96.512 86 3 0 2907 2992 9228672 9228587 3.320000e-30 143.0
16 TraesCS1D01G423200 chr6A 95.506 89 4 0 2907 2995 172113181 172113269 3.320000e-30 143.0
17 TraesCS1D01G423200 chr6A 95.349 86 4 0 2907 2992 362228808 362228893 1.540000e-28 137.0
18 TraesCS1D01G423200 chr6A 100.000 31 0 0 2852 2882 46576182 46576152 1.240000e-04 58.4
19 TraesCS1D01G423200 chr5A 96.512 86 3 0 2907 2992 698143560 698143645 3.320000e-30 143.0
20 TraesCS1D01G423200 chr5A 100.000 31 0 0 2852 2882 395900123 395900093 1.240000e-04 58.4
21 TraesCS1D01G423200 chr7A 95.402 87 4 0 2908 2994 138960827 138960741 4.290000e-29 139.0
22 TraesCS1D01G423200 chr2D 94.444 90 5 0 2907 2996 575186250 575186339 4.290000e-29 139.0
23 TraesCS1D01G423200 chr2D 100.000 31 0 0 2851 2881 584251587 584251557 1.240000e-04 58.4
24 TraesCS1D01G423200 chr6D 94.382 89 5 0 2907 2995 246436072 246435984 1.540000e-28 137.0
25 TraesCS1D01G423200 chr5D 90.722 97 9 0 2899 2995 543829251 543829155 2.580000e-26 130.0
26 TraesCS1D01G423200 chr6B 96.970 33 1 0 2851 2883 24799212 24799180 4.450000e-04 56.5
27 TraesCS1D01G423200 chr6B 92.105 38 3 0 2846 2883 135936295 135936332 2.000000e-03 54.7
28 TraesCS1D01G423200 chr5B 96.970 33 1 0 2851 2883 446453197 446453229 4.450000e-04 56.5
29 TraesCS1D01G423200 chr5B 96.970 33 1 0 2851 2883 582588145 582588177 4.450000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G423200 chr1D 478290612 478293803 3191 True 2993.300 5895 99.03850 1 3192 2 chr1D.!!$R2 3191
1 TraesCS1D01G423200 chr1A 574497862 574502689 4827 True 943.950 2902 90.07275 192 3190 4 chr1A.!!$R1 2998
2 TraesCS1D01G423200 chr1B 666077789 666080605 2816 True 830.475 2503 90.35600 190 3192 4 chr1B.!!$R1 3002
3 TraesCS1D01G423200 chr3D 302947484 302948130 646 False 538.000 538 82.12100 1265 1908 1 chr3D.!!$F1 643
4 TraesCS1D01G423200 chr3B 418439283 418440123 840 True 508.000 508 78.36000 1059 1908 1 chr3B.!!$R1 849
5 TraesCS1D01G423200 chr3A 431740304 431741156 852 True 475.000 475 77.75300 1059 1908 1 chr3A.!!$R2 849

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
111 112 0.034670 GATTGCTCCTCCACTGGCTT 60.035 55.0 0.0 0.0 0.00 4.35 F
115 116 0.037447 GCTCCTCCACTGGCTTTTCT 59.963 55.0 0.0 0.0 0.00 2.52 F
2029 4272 0.093026 CGCTCGTTGGAAGCGTAAAG 59.907 55.0 9.2 0.0 45.59 1.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1993 4236 1.743995 CGTAAACGCCCCCTGAAGG 60.744 63.158 0.0 0.0 0.00 3.46 R
2036 4287 5.972382 GCAACAAAACGTAGTATTTGGTTCA 59.028 36.000 13.4 0.0 45.00 3.18 R
2981 5302 0.107508 TGGACGTAGTACTCCCTCCG 60.108 60.000 0.0 0.0 45.52 4.63 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 2.887568 GAGGCATCGACCACGCTG 60.888 66.667 0.00 0.00 38.44 5.18
26 27 4.457496 AGGCATCGACCACGCTGG 62.457 66.667 0.00 2.92 45.02 4.85
35 36 2.184322 CCACGCTGGTATGCTCGT 59.816 61.111 0.00 0.00 35.35 4.18
36 37 1.447838 CCACGCTGGTATGCTCGTT 60.448 57.895 0.00 0.00 32.38 3.85
37 38 1.695893 CCACGCTGGTATGCTCGTTG 61.696 60.000 0.00 0.00 32.38 4.10
38 39 2.100631 ACGCTGGTATGCTCGTTGC 61.101 57.895 0.00 0.00 43.25 4.17
39 40 2.703409 GCTGGTATGCTCGTTGCG 59.297 61.111 0.00 0.00 46.63 4.85
40 41 1.809619 GCTGGTATGCTCGTTGCGA 60.810 57.895 0.00 0.00 46.63 5.10
41 42 1.154205 GCTGGTATGCTCGTTGCGAT 61.154 55.000 0.00 0.00 46.63 4.58
42 43 0.855349 CTGGTATGCTCGTTGCGATC 59.145 55.000 0.00 0.00 46.63 3.69
43 44 0.869880 TGGTATGCTCGTTGCGATCG 60.870 55.000 11.69 11.69 46.63 3.69
44 45 1.199370 GTATGCTCGTTGCGATCGC 59.801 57.895 32.48 32.48 46.63 4.58
45 46 1.065764 TATGCTCGTTGCGATCGCT 59.934 52.632 37.01 19.13 46.63 4.93
46 47 0.309612 TATGCTCGTTGCGATCGCTA 59.690 50.000 37.01 29.14 46.63 4.26
47 48 0.527600 ATGCTCGTTGCGATCGCTAA 60.528 50.000 37.01 26.30 46.63 3.09
48 49 0.527600 TGCTCGTTGCGATCGCTAAT 60.528 50.000 37.01 0.00 46.63 1.73
49 50 0.159763 GCTCGTTGCGATCGCTAATC 59.840 55.000 37.01 22.88 42.51 1.75
50 51 1.759994 CTCGTTGCGATCGCTAATCT 58.240 50.000 37.01 0.00 42.51 2.40
51 52 1.711298 CTCGTTGCGATCGCTAATCTC 59.289 52.381 37.01 18.63 42.51 2.75
52 53 0.778815 CGTTGCGATCGCTAATCTCC 59.221 55.000 37.01 18.28 42.51 3.71
53 54 1.852942 GTTGCGATCGCTAATCTCCA 58.147 50.000 37.01 14.79 42.51 3.86
54 55 2.408050 GTTGCGATCGCTAATCTCCAT 58.592 47.619 37.01 0.00 42.51 3.41
55 56 2.802816 GTTGCGATCGCTAATCTCCATT 59.197 45.455 37.01 0.00 42.51 3.16
56 57 2.407090 TGCGATCGCTAATCTCCATTG 58.593 47.619 37.01 0.00 42.51 2.82
57 58 2.224042 TGCGATCGCTAATCTCCATTGT 60.224 45.455 37.01 0.00 42.51 2.71
58 59 3.005367 TGCGATCGCTAATCTCCATTGTA 59.995 43.478 37.01 12.07 42.51 2.41
59 60 3.365220 GCGATCGCTAATCTCCATTGTAC 59.635 47.826 31.94 0.00 38.26 2.90
60 61 3.604198 CGATCGCTAATCTCCATTGTACG 59.396 47.826 0.26 0.00 31.68 3.67
61 62 2.739292 TCGCTAATCTCCATTGTACGC 58.261 47.619 0.00 0.00 0.00 4.42
62 63 2.100087 TCGCTAATCTCCATTGTACGCA 59.900 45.455 0.00 0.00 0.00 5.24
63 64 2.863740 CGCTAATCTCCATTGTACGCAA 59.136 45.455 0.00 0.00 39.16 4.85
64 65 3.302480 CGCTAATCTCCATTGTACGCAAC 60.302 47.826 0.00 0.00 37.44 4.17
65 66 3.621268 GCTAATCTCCATTGTACGCAACA 59.379 43.478 0.00 0.00 37.44 3.33
77 78 6.676237 TTGTACGCAACAATATGTCATCAT 57.324 33.333 0.09 0.00 43.22 2.45
78 79 6.046885 TGTACGCAACAATATGTCATCATG 57.953 37.500 0.00 0.00 34.29 3.07
79 80 5.584251 TGTACGCAACAATATGTCATCATGT 59.416 36.000 0.00 0.00 34.29 3.21
80 81 5.565592 ACGCAACAATATGTCATCATGTT 57.434 34.783 9.30 9.30 36.16 2.71
84 85 6.101332 GCAACAATATGTCATCATGTTGGTT 58.899 36.000 27.78 13.77 45.92 3.67
85 86 6.254157 GCAACAATATGTCATCATGTTGGTTC 59.746 38.462 27.78 16.83 45.92 3.62
86 87 7.314393 CAACAATATGTCATCATGTTGGTTCA 58.686 34.615 23.44 2.75 45.92 3.18
87 88 7.813627 CAACAATATGTCATCATGTTGGTTCAA 59.186 33.333 23.44 0.00 45.92 2.69
88 89 8.533657 AACAATATGTCATCATGTTGGTTCAAT 58.466 29.630 17.13 0.00 45.92 2.57
92 93 6.513806 TGTCATCATGTTGGTTCAATAAGG 57.486 37.500 3.98 0.00 0.00 2.69
93 94 6.244654 TGTCATCATGTTGGTTCAATAAGGA 58.755 36.000 3.98 0.00 0.00 3.36
94 95 6.891361 TGTCATCATGTTGGTTCAATAAGGAT 59.109 34.615 3.98 0.00 0.00 3.24
95 96 7.396907 TGTCATCATGTTGGTTCAATAAGGATT 59.603 33.333 3.98 0.00 0.00 3.01
96 97 7.703621 GTCATCATGTTGGTTCAATAAGGATTG 59.296 37.037 3.98 0.00 43.39 2.67
97 98 5.964758 TCATGTTGGTTCAATAAGGATTGC 58.035 37.500 0.00 0.00 42.01 3.56
98 99 5.716228 TCATGTTGGTTCAATAAGGATTGCT 59.284 36.000 0.00 0.00 42.01 3.91
99 100 5.643379 TGTTGGTTCAATAAGGATTGCTC 57.357 39.130 0.00 0.00 42.01 4.26
100 101 4.462483 TGTTGGTTCAATAAGGATTGCTCC 59.538 41.667 0.00 0.00 42.01 4.70
108 109 4.972875 GGATTGCTCCTCCACTGG 57.027 61.111 0.00 0.00 38.65 4.00
109 110 1.452833 GGATTGCTCCTCCACTGGC 60.453 63.158 0.00 0.00 38.65 4.85
110 111 1.606531 GATTGCTCCTCCACTGGCT 59.393 57.895 0.00 0.00 0.00 4.75
111 112 0.034670 GATTGCTCCTCCACTGGCTT 60.035 55.000 0.00 0.00 0.00 4.35
112 113 0.407139 ATTGCTCCTCCACTGGCTTT 59.593 50.000 0.00 0.00 0.00 3.51
113 114 0.185901 TTGCTCCTCCACTGGCTTTT 59.814 50.000 0.00 0.00 0.00 2.27
114 115 0.250901 TGCTCCTCCACTGGCTTTTC 60.251 55.000 0.00 0.00 0.00 2.29
115 116 0.037447 GCTCCTCCACTGGCTTTTCT 59.963 55.000 0.00 0.00 0.00 2.52
116 117 1.279271 GCTCCTCCACTGGCTTTTCTA 59.721 52.381 0.00 0.00 0.00 2.10
117 118 2.679349 GCTCCTCCACTGGCTTTTCTAG 60.679 54.545 0.00 0.00 0.00 2.43
118 119 2.834549 CTCCTCCACTGGCTTTTCTAGA 59.165 50.000 0.00 0.00 0.00 2.43
119 120 3.454082 CTCCTCCACTGGCTTTTCTAGAT 59.546 47.826 0.00 0.00 0.00 1.98
120 121 3.198635 TCCTCCACTGGCTTTTCTAGATG 59.801 47.826 0.00 0.00 0.00 2.90
121 122 2.941720 CTCCACTGGCTTTTCTAGATGC 59.058 50.000 0.00 0.00 0.00 3.91
122 123 2.019984 CCACTGGCTTTTCTAGATGCC 58.980 52.381 19.11 19.11 45.10 4.40
127 128 2.716217 GGCTTTTCTAGATGCCACAGT 58.284 47.619 20.31 0.00 44.34 3.55
128 129 2.421424 GGCTTTTCTAGATGCCACAGTG 59.579 50.000 20.31 0.00 44.34 3.66
129 130 2.421424 GCTTTTCTAGATGCCACAGTGG 59.579 50.000 16.16 16.16 41.55 4.00
130 131 3.679389 CTTTTCTAGATGCCACAGTGGT 58.321 45.455 21.26 1.35 40.46 4.16
131 132 3.788227 TTTCTAGATGCCACAGTGGTT 57.212 42.857 21.26 9.11 40.46 3.67
132 133 2.768253 TCTAGATGCCACAGTGGTTG 57.232 50.000 21.26 2.40 40.46 3.77
133 134 2.256306 TCTAGATGCCACAGTGGTTGA 58.744 47.619 21.26 6.03 40.46 3.18
134 135 2.637382 TCTAGATGCCACAGTGGTTGAA 59.363 45.455 21.26 5.25 40.46 2.69
135 136 2.363306 AGATGCCACAGTGGTTGAAA 57.637 45.000 21.26 2.77 40.46 2.69
136 137 2.880443 AGATGCCACAGTGGTTGAAAT 58.120 42.857 21.26 7.40 40.46 2.17
137 138 3.233507 AGATGCCACAGTGGTTGAAATT 58.766 40.909 21.26 0.00 40.46 1.82
138 139 3.642848 AGATGCCACAGTGGTTGAAATTT 59.357 39.130 21.26 0.00 40.46 1.82
139 140 3.451141 TGCCACAGTGGTTGAAATTTC 57.549 42.857 21.26 11.41 40.46 2.17
140 141 3.030291 TGCCACAGTGGTTGAAATTTCT 58.970 40.909 21.26 0.00 40.46 2.52
141 142 3.068024 TGCCACAGTGGTTGAAATTTCTC 59.932 43.478 21.26 11.47 40.46 2.87
142 143 3.853307 GCCACAGTGGTTGAAATTTCTCG 60.853 47.826 21.26 2.95 40.46 4.04
143 144 3.563808 CCACAGTGGTTGAAATTTCTCGA 59.436 43.478 18.64 7.06 31.35 4.04
144 145 4.216257 CCACAGTGGTTGAAATTTCTCGAT 59.784 41.667 18.64 0.00 31.35 3.59
145 146 5.411361 CCACAGTGGTTGAAATTTCTCGATA 59.589 40.000 18.64 0.00 31.35 2.92
146 147 6.094048 CCACAGTGGTTGAAATTTCTCGATAT 59.906 38.462 18.64 0.00 31.35 1.63
147 148 7.362056 CCACAGTGGTTGAAATTTCTCGATATT 60.362 37.037 18.64 0.00 31.35 1.28
148 149 7.482743 CACAGTGGTTGAAATTTCTCGATATTG 59.517 37.037 18.64 11.13 0.00 1.90
149 150 7.174946 ACAGTGGTTGAAATTTCTCGATATTGT 59.825 33.333 18.64 11.66 0.00 2.71
150 151 7.693951 CAGTGGTTGAAATTTCTCGATATTGTC 59.306 37.037 18.64 0.94 0.00 3.18
151 152 6.967199 GTGGTTGAAATTTCTCGATATTGTCC 59.033 38.462 18.64 7.05 0.00 4.02
152 153 6.657117 TGGTTGAAATTTCTCGATATTGTCCA 59.343 34.615 18.64 9.03 0.00 4.02
153 154 7.339212 TGGTTGAAATTTCTCGATATTGTCCAT 59.661 33.333 18.64 0.00 0.00 3.41
154 155 7.857885 GGTTGAAATTTCTCGATATTGTCCATC 59.142 37.037 18.64 0.00 0.00 3.51
155 156 8.616076 GTTGAAATTTCTCGATATTGTCCATCT 58.384 33.333 18.64 0.00 0.00 2.90
156 157 8.370493 TGAAATTTCTCGATATTGTCCATCTC 57.630 34.615 18.64 0.00 0.00 2.75
157 158 7.442364 TGAAATTTCTCGATATTGTCCATCTCC 59.558 37.037 18.64 0.00 0.00 3.71
158 159 4.505313 TTCTCGATATTGTCCATCTCCG 57.495 45.455 0.00 0.00 0.00 4.63
159 160 3.751518 TCTCGATATTGTCCATCTCCGA 58.248 45.455 0.00 0.00 0.00 4.55
160 161 3.502595 TCTCGATATTGTCCATCTCCGAC 59.497 47.826 0.00 0.00 0.00 4.79
161 162 3.487372 TCGATATTGTCCATCTCCGACT 58.513 45.455 0.00 0.00 0.00 4.18
162 163 3.889538 TCGATATTGTCCATCTCCGACTT 59.110 43.478 0.00 0.00 0.00 3.01
163 164 3.983988 CGATATTGTCCATCTCCGACTTG 59.016 47.826 0.00 0.00 0.00 3.16
164 165 4.261614 CGATATTGTCCATCTCCGACTTGA 60.262 45.833 0.00 0.00 0.00 3.02
165 166 3.533606 ATTGTCCATCTCCGACTTGAG 57.466 47.619 0.00 0.00 0.00 3.02
166 167 0.532573 TGTCCATCTCCGACTTGAGC 59.467 55.000 0.00 0.00 32.22 4.26
167 168 0.820871 GTCCATCTCCGACTTGAGCT 59.179 55.000 0.00 0.00 32.22 4.09
168 169 2.025155 GTCCATCTCCGACTTGAGCTA 58.975 52.381 0.00 0.00 32.22 3.32
169 170 2.025155 TCCATCTCCGACTTGAGCTAC 58.975 52.381 0.00 0.00 32.22 3.58
170 171 1.751351 CCATCTCCGACTTGAGCTACA 59.249 52.381 0.00 0.00 32.22 2.74
171 172 2.223688 CCATCTCCGACTTGAGCTACAG 60.224 54.545 0.00 0.00 32.22 2.74
172 173 2.201921 TCTCCGACTTGAGCTACAGT 57.798 50.000 0.00 0.00 32.22 3.55
173 174 3.345508 TCTCCGACTTGAGCTACAGTA 57.654 47.619 0.00 0.00 32.22 2.74
174 175 3.682696 TCTCCGACTTGAGCTACAGTAA 58.317 45.455 0.00 0.00 32.22 2.24
175 176 3.439476 TCTCCGACTTGAGCTACAGTAAC 59.561 47.826 0.00 0.00 32.22 2.50
176 177 3.151554 TCCGACTTGAGCTACAGTAACA 58.848 45.455 0.00 0.00 0.00 2.41
177 178 3.057736 TCCGACTTGAGCTACAGTAACAC 60.058 47.826 0.00 0.00 0.00 3.32
178 179 3.305131 CCGACTTGAGCTACAGTAACACA 60.305 47.826 0.00 0.00 0.00 3.72
179 180 4.295870 CGACTTGAGCTACAGTAACACAA 58.704 43.478 0.00 0.00 0.00 3.33
180 181 4.383052 CGACTTGAGCTACAGTAACACAAG 59.617 45.833 15.63 15.63 39.02 3.16
181 182 4.632153 ACTTGAGCTACAGTAACACAAGG 58.368 43.478 19.31 7.24 37.93 3.61
182 183 4.344102 ACTTGAGCTACAGTAACACAAGGA 59.656 41.667 19.31 0.00 37.93 3.36
183 184 4.252971 TGAGCTACAGTAACACAAGGAC 57.747 45.455 0.00 0.00 0.00 3.85
184 185 3.895656 TGAGCTACAGTAACACAAGGACT 59.104 43.478 0.00 0.00 0.00 3.85
185 186 5.074804 TGAGCTACAGTAACACAAGGACTA 58.925 41.667 0.00 0.00 0.00 2.59
186 187 5.715279 TGAGCTACAGTAACACAAGGACTAT 59.285 40.000 0.00 0.00 0.00 2.12
187 188 6.127703 TGAGCTACAGTAACACAAGGACTATC 60.128 42.308 0.00 0.00 0.00 2.08
188 189 5.035443 GCTACAGTAACACAAGGACTATCG 58.965 45.833 0.00 0.00 0.00 2.92
189 190 5.163683 GCTACAGTAACACAAGGACTATCGA 60.164 44.000 0.00 0.00 0.00 3.59
190 191 5.916661 ACAGTAACACAAGGACTATCGAT 57.083 39.130 2.16 2.16 0.00 3.59
191 192 7.255035 GCTACAGTAACACAAGGACTATCGATA 60.255 40.741 4.78 4.78 0.00 2.92
192 193 7.584122 ACAGTAACACAAGGACTATCGATAT 57.416 36.000 5.40 0.00 0.00 1.63
193 194 8.008513 ACAGTAACACAAGGACTATCGATATT 57.991 34.615 5.40 0.00 0.00 1.28
194 195 7.921214 ACAGTAACACAAGGACTATCGATATTG 59.079 37.037 5.40 9.91 0.00 1.90
195 196 6.924060 AGTAACACAAGGACTATCGATATTGC 59.076 38.462 13.77 10.40 0.00 3.56
196 197 5.537300 ACACAAGGACTATCGATATTGCT 57.463 39.130 10.43 10.43 0.00 3.91
205 206 6.820656 GGACTATCGATATTGCTCATTCCATT 59.179 38.462 5.40 0.00 0.00 3.16
207 208 8.627208 ACTATCGATATTGCTCATTCCATTTT 57.373 30.769 5.40 0.00 0.00 1.82
235 236 1.609932 CTGATGCGTGAACACATTGC 58.390 50.000 5.80 1.75 0.00 3.56
239 240 1.837648 TGCGTGAACACATTGCTTTG 58.162 45.000 5.80 0.00 0.00 2.77
251 252 5.412286 ACACATTGCTTTGGGAAAAATATGC 59.588 36.000 0.00 0.00 0.00 3.14
277 278 7.504924 TGAATAAAAGAATTTGACGACAGGT 57.495 32.000 0.00 0.00 39.02 4.00
342 343 6.672218 TCATAAAGAAGAAGTCCTCCACCATA 59.328 38.462 0.00 0.00 0.00 2.74
358 361 8.674607 CCTCCACCATACTTAAACAATCTTAAC 58.325 37.037 0.00 0.00 0.00 2.01
382 385 8.434733 ACTAAGTAAACTTTTTCTCACCTGTC 57.565 34.615 0.00 0.00 37.40 3.51
392 395 5.489792 TTTCTCACCTGTCTGCTCTTAAT 57.510 39.130 0.00 0.00 0.00 1.40
440 443 3.882888 CACCTGTTTGCTCTAACCTTTCA 59.117 43.478 0.00 0.00 0.00 2.69
442 445 3.058914 CCTGTTTGCTCTAACCTTTCACG 60.059 47.826 0.00 0.00 0.00 4.35
527 533 1.571955 TTGAGCCTCATCAGCCACTA 58.428 50.000 0.00 0.00 0.00 2.74
553 559 2.302587 ACCCCACATACCAAACCAAG 57.697 50.000 0.00 0.00 0.00 3.61
572 578 3.637273 ACCCACTCCGAGGCCAAC 61.637 66.667 5.01 0.00 0.00 3.77
586 2723 0.823356 GCCAACAAACCTCTCCTGCA 60.823 55.000 0.00 0.00 0.00 4.41
607 2744 1.252175 TGTCACTCTCACTGCTCTCC 58.748 55.000 0.00 0.00 0.00 3.71
608 2745 0.170116 GTCACTCTCACTGCTCTCCG 59.830 60.000 0.00 0.00 0.00 4.63
689 2833 1.521681 CCTGCCGTCGATTTCTCCC 60.522 63.158 0.00 0.00 0.00 4.30
757 2901 2.444706 CCCGGGATCAGAGCTCCA 60.445 66.667 18.48 0.00 34.24 3.86
764 2908 1.767681 GGATCAGAGCTCCAGTCCATT 59.232 52.381 18.81 0.00 32.72 3.16
796 2941 0.261696 AGCTCTCTCTCCTTCCTCCC 59.738 60.000 0.00 0.00 0.00 4.30
854 3017 3.596066 CTCACTGCTCACCACCCCG 62.596 68.421 0.00 0.00 0.00 5.73
873 3036 0.958822 GCCCAGTACAAAACCACCAG 59.041 55.000 0.00 0.00 0.00 4.00
900 3063 2.878406 GCTACCTTCACAGACAAAGCAA 59.122 45.455 0.00 0.00 0.00 3.91
940 3103 2.031516 CAACACTCTCTGCCTGCCG 61.032 63.158 0.00 0.00 0.00 5.69
963 3126 1.305930 TAGCGAGTGAAGCAGAGCGA 61.306 55.000 0.00 0.00 37.01 4.93
964 3127 1.734477 GCGAGTGAAGCAGAGCGAA 60.734 57.895 0.00 0.00 34.19 4.70
984 3147 1.885163 GCCATTGCCTTGCTTGCTCT 61.885 55.000 0.00 0.00 0.00 4.09
1140 3317 0.906775 GGGACGAGGGGTATGTGAAA 59.093 55.000 0.00 0.00 0.00 2.69
1938 4151 2.358247 GCACGGTGGATGGTCGTT 60.358 61.111 10.60 0.00 34.73 3.85
1993 4236 0.594602 GTTGGTGGAAACGGGTTAGC 59.405 55.000 0.00 0.00 0.00 3.09
2029 4272 0.093026 CGCTCGTTGGAAGCGTAAAG 59.907 55.000 9.20 0.00 45.59 1.85
2036 4287 2.335316 TGGAAGCGTAAAGTGGTTGT 57.665 45.000 0.00 0.00 0.00 3.32
2060 4311 5.972382 TGAACCAAATACTACGTTTTGTTGC 59.028 36.000 9.03 0.00 32.23 4.17
2169 4433 5.649970 AGTAGCTCTACCAGTAGTACCAT 57.350 43.478 4.81 0.00 36.75 3.55
2182 4446 5.355071 CAGTAGTACCATGCATGTTGTCATT 59.645 40.000 24.58 8.50 31.15 2.57
2183 4447 4.707030 AGTACCATGCATGTTGTCATTG 57.293 40.909 24.58 9.57 31.15 2.82
2184 4448 4.081406 AGTACCATGCATGTTGTCATTGT 58.919 39.130 24.58 14.65 31.15 2.71
2185 4449 5.252547 AGTACCATGCATGTTGTCATTGTA 58.747 37.500 24.58 13.70 31.15 2.41
2186 4450 5.887598 AGTACCATGCATGTTGTCATTGTAT 59.112 36.000 24.58 5.60 31.15 2.29
2187 4451 5.252969 ACCATGCATGTTGTCATTGTATC 57.747 39.130 24.58 0.00 31.15 2.24
2188 4452 4.201940 ACCATGCATGTTGTCATTGTATCG 60.202 41.667 24.58 7.06 31.15 2.92
2230 4496 2.432444 TCGGGCTTCATGTAGTTTTGG 58.568 47.619 1.02 0.00 0.00 3.28
2243 4509 5.983540 TGTAGTTTTGGCCTTCATTTTGTT 58.016 33.333 3.32 0.00 0.00 2.83
2244 4510 7.113658 TGTAGTTTTGGCCTTCATTTTGTTA 57.886 32.000 3.32 0.00 0.00 2.41
2245 4511 7.731054 TGTAGTTTTGGCCTTCATTTTGTTAT 58.269 30.769 3.32 0.00 0.00 1.89
2246 4512 8.861086 TGTAGTTTTGGCCTTCATTTTGTTATA 58.139 29.630 3.32 0.00 0.00 0.98
2247 4513 9.869757 GTAGTTTTGGCCTTCATTTTGTTATAT 57.130 29.630 3.32 0.00 0.00 0.86
2248 4514 8.776376 AGTTTTGGCCTTCATTTTGTTATATG 57.224 30.769 3.32 0.00 0.00 1.78
2249 4515 8.592809 AGTTTTGGCCTTCATTTTGTTATATGA 58.407 29.630 3.32 0.00 0.00 2.15
2250 4516 9.382275 GTTTTGGCCTTCATTTTGTTATATGAT 57.618 29.630 3.32 0.00 31.34 2.45
2253 4519 8.759481 TGGCCTTCATTTTGTTATATGATACA 57.241 30.769 3.32 0.00 31.34 2.29
2254 4520 8.849168 TGGCCTTCATTTTGTTATATGATACAG 58.151 33.333 3.32 0.00 31.34 2.74
2255 4521 8.850156 GGCCTTCATTTTGTTATATGATACAGT 58.150 33.333 0.00 0.00 31.34 3.55
2286 4560 7.721399 TCTTAGGGCCTCTTTGATTCAAATATC 59.279 37.037 10.74 3.14 32.70 1.63
2303 4577 8.475331 TCAAATATCTTGTTAGGAACTTCGAC 57.525 34.615 0.00 0.00 41.75 4.20
2304 4578 7.274904 TCAAATATCTTGTTAGGAACTTCGACG 59.725 37.037 0.00 0.00 41.75 5.12
2305 4579 3.293311 TCTTGTTAGGAACTTCGACGG 57.707 47.619 0.00 0.00 41.75 4.79
2306 4580 2.886523 TCTTGTTAGGAACTTCGACGGA 59.113 45.455 0.00 0.00 41.75 4.69
2307 4581 2.712057 TGTTAGGAACTTCGACGGAC 57.288 50.000 0.00 0.00 41.75 4.79
2308 4582 2.233271 TGTTAGGAACTTCGACGGACT 58.767 47.619 0.00 0.00 41.75 3.85
2309 4583 2.624838 TGTTAGGAACTTCGACGGACTT 59.375 45.455 0.00 0.00 41.75 3.01
2310 4584 2.985139 GTTAGGAACTTCGACGGACTTG 59.015 50.000 0.00 0.00 41.75 3.16
2311 4585 1.325355 AGGAACTTCGACGGACTTGA 58.675 50.000 0.00 0.00 27.25 3.02
2312 4586 1.684983 AGGAACTTCGACGGACTTGAA 59.315 47.619 0.00 0.00 27.25 2.69
2313 4587 2.299297 AGGAACTTCGACGGACTTGAAT 59.701 45.455 0.00 0.00 27.25 2.57
2314 4588 2.666994 GGAACTTCGACGGACTTGAATC 59.333 50.000 0.00 0.00 0.00 2.52
2315 4589 2.365408 ACTTCGACGGACTTGAATCC 57.635 50.000 0.00 0.00 35.16 3.01
2316 4590 1.893801 ACTTCGACGGACTTGAATCCT 59.106 47.619 0.00 0.00 36.52 3.24
2317 4591 2.299297 ACTTCGACGGACTTGAATCCTT 59.701 45.455 0.00 0.00 36.52 3.36
2318 4592 3.244112 ACTTCGACGGACTTGAATCCTTT 60.244 43.478 0.00 0.00 36.52 3.11
2319 4593 2.683968 TCGACGGACTTGAATCCTTTG 58.316 47.619 0.00 0.00 36.52 2.77
2320 4594 1.732259 CGACGGACTTGAATCCTTTGG 59.268 52.381 0.00 0.00 36.52 3.28
2321 4595 2.779506 GACGGACTTGAATCCTTTGGT 58.220 47.619 0.00 0.00 36.52 3.67
2324 4598 4.070009 ACGGACTTGAATCCTTTGGTAAC 58.930 43.478 0.00 0.00 36.52 2.50
2385 4661 9.558396 TTAATGCAATCAAGAAAACCAAAATCT 57.442 25.926 0.00 0.00 0.00 2.40
2420 4696 2.026915 TGGACATGACATTCAGACCCTG 60.027 50.000 0.00 0.00 0.00 4.45
2436 4713 1.279271 CCCTGAAATCGACTCAAGGGT 59.721 52.381 14.25 0.00 31.65 4.34
2438 4715 3.003480 CCTGAAATCGACTCAAGGGTTC 58.997 50.000 0.00 0.00 0.00 3.62
2439 4716 3.557054 CCTGAAATCGACTCAAGGGTTCA 60.557 47.826 0.00 0.00 0.00 3.18
2440 4717 4.065088 CTGAAATCGACTCAAGGGTTCAA 58.935 43.478 0.00 0.00 0.00 2.69
2441 4718 4.651778 TGAAATCGACTCAAGGGTTCAAT 58.348 39.130 0.00 0.00 0.00 2.57
2442 4719 5.800296 TGAAATCGACTCAAGGGTTCAATA 58.200 37.500 0.00 0.00 0.00 1.90
2443 4720 5.874810 TGAAATCGACTCAAGGGTTCAATAG 59.125 40.000 0.00 0.00 0.00 1.73
2444 4721 5.422214 AATCGACTCAAGGGTTCAATAGT 57.578 39.130 0.00 0.00 0.00 2.12
2445 4722 4.188247 TCGACTCAAGGGTTCAATAGTG 57.812 45.455 0.00 0.00 0.00 2.74
2446 4723 3.830178 TCGACTCAAGGGTTCAATAGTGA 59.170 43.478 0.00 0.00 0.00 3.41
2447 4724 3.927142 CGACTCAAGGGTTCAATAGTGAC 59.073 47.826 0.00 0.00 31.90 3.67
2448 4725 3.926616 ACTCAAGGGTTCAATAGTGACG 58.073 45.455 0.00 0.00 31.90 4.35
2449 4726 3.576982 ACTCAAGGGTTCAATAGTGACGA 59.423 43.478 0.00 0.00 31.90 4.20
2450 4727 3.921677 TCAAGGGTTCAATAGTGACGAC 58.078 45.455 0.00 0.00 31.90 4.34
2451 4728 3.576982 TCAAGGGTTCAATAGTGACGACT 59.423 43.478 0.00 0.00 31.90 4.18
2452 4729 3.594603 AGGGTTCAATAGTGACGACTG 57.405 47.619 0.00 0.00 31.90 3.51
2453 4730 2.000447 GGGTTCAATAGTGACGACTGC 59.000 52.381 0.00 0.00 31.90 4.40
2454 4731 2.611971 GGGTTCAATAGTGACGACTGCA 60.612 50.000 0.00 0.00 31.90 4.41
2459 4736 5.940192 TCAATAGTGACGACTGCATTTTT 57.060 34.783 0.00 0.00 33.21 1.94
2460 4737 7.295201 GTTCAATAGTGACGACTGCATTTTTA 58.705 34.615 0.00 0.00 31.90 1.52
2497 4806 1.333619 GGACACGTGCATGAACACTTT 59.666 47.619 17.22 0.00 38.45 2.66
2498 4807 2.602217 GGACACGTGCATGAACACTTTC 60.602 50.000 17.22 0.26 38.45 2.62
2501 4810 0.865111 CGTGCATGAACACTTTCCGA 59.135 50.000 4.29 0.00 38.45 4.55
2508 4817 2.557317 TGAACACTTTCCGACTGGTTC 58.443 47.619 0.00 0.00 36.18 3.62
2552 4861 1.017177 GTAAAGGTGTGGCGCATCGA 61.017 55.000 10.83 0.00 32.28 3.59
2553 4862 1.017177 TAAAGGTGTGGCGCATCGAC 61.017 55.000 10.83 0.00 32.28 4.20
2563 4872 1.769212 CGCATCGACGATTCATCCG 59.231 57.895 7.83 2.78 34.06 4.18
2564 4873 1.488957 GCATCGACGATTCATCCGC 59.511 57.895 7.83 3.65 0.00 5.54
2565 4874 1.769212 CATCGACGATTCATCCGCG 59.231 57.895 7.83 0.00 0.00 6.46
2566 4875 1.371758 ATCGACGATTCATCCGCGG 60.372 57.895 22.12 22.12 0.00 6.46
2567 4876 3.692367 CGACGATTCATCCGCGGC 61.692 66.667 23.51 3.78 0.00 6.53
2568 4877 3.692367 GACGATTCATCCGCGGCG 61.692 66.667 23.51 19.76 0.00 6.46
2578 4887 2.414179 CCGCGGCGGTAATAGTCA 59.586 61.111 32.14 0.00 42.73 3.41
2583 4897 1.601162 GCGGCGGTAATAGTCATTCGA 60.601 52.381 9.78 0.00 0.00 3.71
2592 4906 5.639506 GGTAATAGTCATTCGATGGTCCATG 59.360 44.000 9.76 2.00 0.00 3.66
2632 4946 8.608185 AAAATTATCATGTATTGGGGTCTTGT 57.392 30.769 0.00 0.00 0.00 3.16
2633 4947 9.707957 AAAATTATCATGTATTGGGGTCTTGTA 57.292 29.630 0.00 0.00 0.00 2.41
2634 4948 9.881773 AAATTATCATGTATTGGGGTCTTGTAT 57.118 29.630 0.00 0.00 0.00 2.29
2635 4949 9.881773 AATTATCATGTATTGGGGTCTTGTATT 57.118 29.630 0.00 0.00 0.00 1.89
2639 4953 8.690203 TCATGTATTGGGGTCTTGTATTTATG 57.310 34.615 0.00 0.00 0.00 1.90
2640 4954 7.723616 TCATGTATTGGGGTCTTGTATTTATGG 59.276 37.037 0.00 0.00 0.00 2.74
2641 4955 6.975949 TGTATTGGGGTCTTGTATTTATGGT 58.024 36.000 0.00 0.00 0.00 3.55
2642 4956 6.831353 TGTATTGGGGTCTTGTATTTATGGTG 59.169 38.462 0.00 0.00 0.00 4.17
2643 4957 5.522315 TTGGGGTCTTGTATTTATGGTGA 57.478 39.130 0.00 0.00 0.00 4.02
2644 4958 5.522315 TGGGGTCTTGTATTTATGGTGAA 57.478 39.130 0.00 0.00 0.00 3.18
2646 4960 6.126409 TGGGGTCTTGTATTTATGGTGAATC 58.874 40.000 0.00 0.00 0.00 2.52
2647 4961 6.069088 TGGGGTCTTGTATTTATGGTGAATCT 60.069 38.462 0.00 0.00 0.00 2.40
2648 4962 6.833933 GGGGTCTTGTATTTATGGTGAATCTT 59.166 38.462 0.00 0.00 0.00 2.40
2649 4963 7.342026 GGGGTCTTGTATTTATGGTGAATCTTT 59.658 37.037 0.00 0.00 0.00 2.52
2650 4964 8.749354 GGGTCTTGTATTTATGGTGAATCTTTT 58.251 33.333 0.00 0.00 0.00 2.27
2651 4965 9.573133 GGTCTTGTATTTATGGTGAATCTTTTG 57.427 33.333 0.00 0.00 0.00 2.44
2663 4977 8.648698 TGGTGAATCTTTTGAATAGATTTGGA 57.351 30.769 11.27 0.00 41.24 3.53
2664 4978 9.258629 TGGTGAATCTTTTGAATAGATTTGGAT 57.741 29.630 11.27 0.00 41.24 3.41
2665 4979 9.741647 GGTGAATCTTTTGAATAGATTTGGATC 57.258 33.333 11.27 1.23 41.24 3.36
2666 4980 9.741647 GTGAATCTTTTGAATAGATTTGGATCC 57.258 33.333 11.27 4.20 41.24 3.36
2667 4981 9.705103 TGAATCTTTTGAATAGATTTGGATCCT 57.295 29.630 14.23 0.00 41.24 3.24
2672 4986 9.722056 CTTTTGAATAGATTTGGATCCTTTACG 57.278 33.333 14.23 0.00 32.44 3.18
2673 4987 9.456147 TTTTGAATAGATTTGGATCCTTTACGA 57.544 29.630 14.23 0.00 32.44 3.43
2674 4988 9.456147 TTTGAATAGATTTGGATCCTTTACGAA 57.544 29.630 14.23 0.00 32.44 3.85
2675 4989 9.456147 TTGAATAGATTTGGATCCTTTACGAAA 57.544 29.630 14.23 4.16 32.44 3.46
2676 4990 9.456147 TGAATAGATTTGGATCCTTTACGAAAA 57.544 29.630 14.23 3.39 32.44 2.29
2696 5010 5.883503 AAAAAGTGAACCAGTACGTTTCA 57.116 34.783 0.00 0.00 30.26 2.69
2697 5011 6.445357 AAAAAGTGAACCAGTACGTTTCAT 57.555 33.333 0.00 0.00 30.26 2.57
2698 5012 5.418310 AAAGTGAACCAGTACGTTTCATG 57.582 39.130 0.00 0.00 0.00 3.07
2699 5013 2.806244 AGTGAACCAGTACGTTTCATGC 59.194 45.455 0.00 0.00 0.00 4.06
2700 5014 2.806244 GTGAACCAGTACGTTTCATGCT 59.194 45.455 0.00 0.00 0.00 3.79
2701 5015 3.250040 GTGAACCAGTACGTTTCATGCTT 59.750 43.478 0.00 0.00 0.00 3.91
2702 5016 3.249799 TGAACCAGTACGTTTCATGCTTG 59.750 43.478 0.00 0.00 0.00 4.01
2703 5017 2.846193 ACCAGTACGTTTCATGCTTGT 58.154 42.857 0.00 0.00 0.00 3.16
2704 5018 2.806244 ACCAGTACGTTTCATGCTTGTC 59.194 45.455 0.00 0.00 0.00 3.18
2705 5019 3.067106 CCAGTACGTTTCATGCTTGTCT 58.933 45.455 0.00 0.00 0.00 3.41
2706 5020 3.498397 CCAGTACGTTTCATGCTTGTCTT 59.502 43.478 0.00 0.00 0.00 3.01
2707 5021 4.024048 CCAGTACGTTTCATGCTTGTCTTT 60.024 41.667 0.00 0.00 0.00 2.52
2708 5022 5.505654 CCAGTACGTTTCATGCTTGTCTTTT 60.506 40.000 0.00 0.00 0.00 2.27
2709 5023 5.971202 CAGTACGTTTCATGCTTGTCTTTTT 59.029 36.000 0.00 0.00 0.00 1.94
2740 5054 9.528018 TTTTGAGTTTTTAGAATCATGTGAACC 57.472 29.630 0.00 0.00 0.00 3.62
2741 5055 7.815840 TGAGTTTTTAGAATCATGTGAACCA 57.184 32.000 0.00 0.00 0.00 3.67
2742 5056 8.231692 TGAGTTTTTAGAATCATGTGAACCAA 57.768 30.769 0.00 0.00 0.00 3.67
2743 5057 8.859090 TGAGTTTTTAGAATCATGTGAACCAAT 58.141 29.630 0.00 0.00 0.00 3.16
2744 5058 9.132521 GAGTTTTTAGAATCATGTGAACCAATG 57.867 33.333 0.00 0.00 0.00 2.82
2745 5059 8.859090 AGTTTTTAGAATCATGTGAACCAATGA 58.141 29.630 0.00 0.00 0.00 2.57
2746 5060 9.132521 GTTTTTAGAATCATGTGAACCAATGAG 57.867 33.333 0.00 0.00 0.00 2.90
2747 5061 7.395190 TTTAGAATCATGTGAACCAATGAGG 57.605 36.000 0.00 0.00 45.67 3.86
2748 5062 3.698040 AGAATCATGTGAACCAATGAGGC 59.302 43.478 0.00 0.00 43.14 4.70
2749 5063 2.583024 TCATGTGAACCAATGAGGCA 57.417 45.000 0.00 0.00 43.14 4.75
2750 5064 3.090210 TCATGTGAACCAATGAGGCAT 57.910 42.857 0.00 0.00 43.14 4.40
2751 5065 3.433343 TCATGTGAACCAATGAGGCATT 58.567 40.909 0.00 0.00 43.14 3.56
2752 5066 4.598022 TCATGTGAACCAATGAGGCATTA 58.402 39.130 0.00 0.00 43.14 1.90
2753 5067 5.015515 TCATGTGAACCAATGAGGCATTAA 58.984 37.500 0.00 0.00 43.14 1.40
2754 5068 5.657745 TCATGTGAACCAATGAGGCATTAAT 59.342 36.000 0.00 0.00 43.14 1.40
2764 5078 7.148205 ACCAATGAGGCATTAATTCAAATTTGC 60.148 33.333 13.54 0.00 43.14 3.68
2765 5079 7.148222 CCAATGAGGCATTAATTCAAATTTGCA 60.148 33.333 13.54 2.71 35.08 4.08
2767 5081 5.348179 TGAGGCATTAATTCAAATTTGCACG 59.652 36.000 13.54 0.00 35.08 5.34
2772 5086 8.812329 GGCATTAATTCAAATTTGCACGTTATA 58.188 29.630 13.54 0.00 35.08 0.98
2802 5123 1.134220 GTCCTTATCCATTGGTCGGCA 60.134 52.381 1.86 0.00 0.00 5.69
2809 5130 0.321564 CCATTGGTCGGCAGTCAGAA 60.322 55.000 0.00 0.00 0.00 3.02
2835 5156 2.933906 AGAATGTGAAAACACGTCACGT 59.066 40.909 0.00 0.00 46.89 4.49
2850 5171 2.993899 GTCACGTTTGTGGACTGATAGG 59.006 50.000 0.00 0.00 46.42 2.57
2863 5184 2.243810 CTGATAGGCAGGTACTCCCTC 58.756 57.143 3.36 0.07 43.86 4.30
2864 5185 1.860240 TGATAGGCAGGTACTCCCTCT 59.140 52.381 3.36 0.00 43.86 3.69
2865 5186 2.243810 GATAGGCAGGTACTCCCTCTG 58.756 57.143 3.36 0.00 43.86 3.35
2866 5187 1.008403 TAGGCAGGTACTCCCTCTGT 58.992 55.000 3.36 0.00 43.86 3.41
2867 5188 1.008403 AGGCAGGTACTCCCTCTGTA 58.992 55.000 0.00 0.00 43.86 2.74
2868 5189 1.361543 AGGCAGGTACTCCCTCTGTAA 59.638 52.381 0.00 0.00 43.86 2.41
2869 5190 2.185387 GGCAGGTACTCCCTCTGTAAA 58.815 52.381 0.00 0.00 43.86 2.01
2870 5191 2.093606 GGCAGGTACTCCCTCTGTAAAC 60.094 54.545 0.00 0.00 43.86 2.01
2871 5192 2.832733 GCAGGTACTCCCTCTGTAAACT 59.167 50.000 0.00 0.00 43.86 2.66
2872 5193 4.021916 GCAGGTACTCCCTCTGTAAACTA 58.978 47.826 0.00 0.00 43.86 2.24
2873 5194 4.465305 GCAGGTACTCCCTCTGTAAACTAA 59.535 45.833 0.00 0.00 43.86 2.24
2874 5195 5.128991 GCAGGTACTCCCTCTGTAAACTAAT 59.871 44.000 0.00 0.00 43.86 1.73
2875 5196 6.323225 GCAGGTACTCCCTCTGTAAACTAATA 59.677 42.308 0.00 0.00 43.86 0.98
2876 5197 7.015389 GCAGGTACTCCCTCTGTAAACTAATAT 59.985 40.741 0.00 0.00 43.86 1.28
2877 5198 9.584008 CAGGTACTCCCTCTGTAAACTAATATA 57.416 37.037 0.00 0.00 43.86 0.86
2893 5214 9.887406 AAACTAATATAAAAGTCACGTTTGTGG 57.113 29.630 0.00 0.00 46.42 4.17
2894 5215 8.836268 ACTAATATAAAAGTCACGTTTGTGGA 57.164 30.769 0.00 0.00 46.42 4.02
2895 5216 8.715088 ACTAATATAAAAGTCACGTTTGTGGAC 58.285 33.333 0.00 0.00 46.42 4.02
2896 5217 7.739498 AATATAAAAGTCACGTTTGTGGACT 57.261 32.000 0.00 0.00 46.42 3.85
2897 5218 3.757745 AAAAGTCACGTTTGTGGACTG 57.242 42.857 6.28 0.00 46.42 3.51
2898 5219 2.684001 AAGTCACGTTTGTGGACTGA 57.316 45.000 6.28 0.00 46.42 3.41
2899 5220 2.910688 AGTCACGTTTGTGGACTGAT 57.089 45.000 4.82 0.00 46.42 2.90
2900 5221 4.330944 AAGTCACGTTTGTGGACTGATA 57.669 40.909 6.28 0.00 46.42 2.15
2901 5222 3.914312 AGTCACGTTTGTGGACTGATAG 58.086 45.455 4.82 0.00 46.42 2.08
2902 5223 2.993899 GTCACGTTTGTGGACTGATAGG 59.006 50.000 0.00 0.00 46.42 2.57
2903 5224 1.732259 CACGTTTGTGGACTGATAGGC 59.268 52.381 0.00 0.00 42.59 3.93
2904 5225 1.346395 ACGTTTGTGGACTGATAGGCA 59.654 47.619 0.00 0.00 0.00 4.75
2905 5226 4.712239 CACGTTTGTGGACTGATAGGCAG 61.712 52.174 0.00 0.00 45.18 4.85
2915 5236 2.243810 CTGATAGGCAGGTACTCCCTC 58.756 57.143 3.36 0.07 43.86 4.30
2916 5237 1.860240 TGATAGGCAGGTACTCCCTCT 59.140 52.381 3.36 0.00 43.86 3.69
2917 5238 2.243810 GATAGGCAGGTACTCCCTCTG 58.756 57.143 3.36 0.00 43.86 3.35
2918 5239 1.008403 TAGGCAGGTACTCCCTCTGT 58.992 55.000 3.36 0.00 43.86 3.41
2919 5240 1.008403 AGGCAGGTACTCCCTCTGTA 58.992 55.000 0.00 0.00 43.86 2.74
2920 5241 1.361543 AGGCAGGTACTCCCTCTGTAA 59.638 52.381 0.00 0.00 43.86 2.41
2921 5242 2.185387 GGCAGGTACTCCCTCTGTAAA 58.815 52.381 0.00 0.00 43.86 2.01
2922 5243 2.772515 GGCAGGTACTCCCTCTGTAAAT 59.227 50.000 0.00 0.00 43.86 1.40
2923 5244 3.200165 GGCAGGTACTCCCTCTGTAAATT 59.800 47.826 0.00 0.00 43.86 1.82
2924 5245 4.407945 GGCAGGTACTCCCTCTGTAAATTA 59.592 45.833 0.00 0.00 43.86 1.40
2925 5246 5.104652 GGCAGGTACTCCCTCTGTAAATTAA 60.105 44.000 0.00 0.00 43.86 1.40
2926 5247 6.409349 GGCAGGTACTCCCTCTGTAAATTAAT 60.409 42.308 0.00 0.00 43.86 1.40
2927 5248 7.202066 GGCAGGTACTCCCTCTGTAAATTAATA 60.202 40.741 0.00 0.00 43.86 0.98
2928 5249 8.376270 GCAGGTACTCCCTCTGTAAATTAATAT 58.624 37.037 0.00 0.00 43.86 1.28
2986 5307 9.813446 AAACACTCTTATATTAGTTTACGGAGG 57.187 33.333 0.00 0.00 0.00 4.30
2987 5308 7.949434 ACACTCTTATATTAGTTTACGGAGGG 58.051 38.462 0.00 0.00 0.00 4.30
2988 5309 7.781693 ACACTCTTATATTAGTTTACGGAGGGA 59.218 37.037 0.00 0.00 0.00 4.20
2989 5310 8.298140 CACTCTTATATTAGTTTACGGAGGGAG 58.702 40.741 0.00 0.00 0.00 4.30
2990 5311 8.003629 ACTCTTATATTAGTTTACGGAGGGAGT 58.996 37.037 0.00 0.00 0.00 3.85
2991 5312 9.512588 CTCTTATATTAGTTTACGGAGGGAGTA 57.487 37.037 0.00 0.00 0.00 2.59
2992 5313 9.289782 TCTTATATTAGTTTACGGAGGGAGTAC 57.710 37.037 0.00 0.00 0.00 2.73
3079 5407 7.770801 AAAGACTCAAATTTTACCACTTTGC 57.229 32.000 0.00 0.00 31.50 3.68
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 2.887568 CAGCGTGGTCGATGCCTC 60.888 66.667 0.00 0.00 45.84 4.70
18 19 1.447838 AACGAGCATACCAGCGTGG 60.448 57.895 0.00 2.92 45.02 4.94
19 20 1.709760 CAACGAGCATACCAGCGTG 59.290 57.895 0.00 0.00 40.15 5.34
20 21 2.100631 GCAACGAGCATACCAGCGT 61.101 57.895 0.00 0.00 44.79 5.07
21 22 2.703409 GCAACGAGCATACCAGCG 59.297 61.111 0.00 0.00 44.79 5.18
22 23 1.154205 ATCGCAACGAGCATACCAGC 61.154 55.000 0.00 0.00 46.13 4.85
23 24 0.855349 GATCGCAACGAGCATACCAG 59.145 55.000 0.00 0.00 46.13 4.00
24 25 0.869880 CGATCGCAACGAGCATACCA 60.870 55.000 0.26 0.00 42.67 3.25
25 26 1.846648 CGATCGCAACGAGCATACC 59.153 57.895 0.26 0.00 42.67 2.73
26 27 1.199370 GCGATCGCAACGAGCATAC 59.801 57.895 33.89 0.00 42.67 2.39
27 28 0.309612 TAGCGATCGCAACGAGCATA 59.690 50.000 38.60 18.75 42.67 3.14
28 29 0.527600 TTAGCGATCGCAACGAGCAT 60.528 50.000 38.60 19.80 42.67 3.79
29 30 0.527600 ATTAGCGATCGCAACGAGCA 60.528 50.000 38.60 16.03 42.67 4.26
30 31 0.159763 GATTAGCGATCGCAACGAGC 59.840 55.000 38.60 20.90 44.88 5.03
31 32 1.711298 GAGATTAGCGATCGCAACGAG 59.289 52.381 38.60 0.00 44.88 4.18
32 33 1.599667 GGAGATTAGCGATCGCAACGA 60.600 52.381 38.60 22.19 44.88 3.85
33 34 0.778815 GGAGATTAGCGATCGCAACG 59.221 55.000 38.60 4.40 44.88 4.10
34 35 1.852942 TGGAGATTAGCGATCGCAAC 58.147 50.000 38.60 25.19 44.88 4.17
35 36 2.802247 CAATGGAGATTAGCGATCGCAA 59.198 45.455 38.60 29.00 44.88 4.85
36 37 2.224042 ACAATGGAGATTAGCGATCGCA 60.224 45.455 38.60 22.15 44.88 5.10
37 38 2.408050 ACAATGGAGATTAGCGATCGC 58.592 47.619 32.15 32.15 39.85 4.58
38 39 3.604198 CGTACAATGGAGATTAGCGATCG 59.396 47.826 11.69 11.69 39.85 3.69
39 40 3.365220 GCGTACAATGGAGATTAGCGATC 59.635 47.826 0.00 0.00 34.83 3.69
40 41 3.243737 TGCGTACAATGGAGATTAGCGAT 60.244 43.478 0.00 0.00 0.00 4.58
41 42 2.100087 TGCGTACAATGGAGATTAGCGA 59.900 45.455 0.00 0.00 0.00 4.93
42 43 2.469826 TGCGTACAATGGAGATTAGCG 58.530 47.619 0.00 0.00 0.00 4.26
43 44 3.621268 TGTTGCGTACAATGGAGATTAGC 59.379 43.478 0.00 0.00 38.27 3.09
44 45 5.794687 TTGTTGCGTACAATGGAGATTAG 57.205 39.130 0.51 0.00 41.73 1.73
54 55 6.093357 ACATGATGACATATTGTTGCGTACAA 59.907 34.615 0.00 6.66 41.67 2.41
55 56 5.584251 ACATGATGACATATTGTTGCGTACA 59.416 36.000 0.00 0.00 35.09 2.90
56 57 6.048073 ACATGATGACATATTGTTGCGTAC 57.952 37.500 0.00 0.00 35.09 3.67
57 58 6.458070 CCAACATGATGACATATTGTTGCGTA 60.458 38.462 24.42 0.00 40.34 4.42
58 59 5.334319 CAACATGATGACATATTGTTGCGT 58.666 37.500 21.02 0.53 37.55 5.24
59 60 4.736307 CCAACATGATGACATATTGTTGCG 59.264 41.667 24.42 17.95 40.34 4.85
60 61 5.653507 ACCAACATGATGACATATTGTTGC 58.346 37.500 24.42 0.82 40.34 4.17
61 62 7.314393 TGAACCAACATGATGACATATTGTTG 58.686 34.615 23.58 23.58 38.70 3.33
62 63 7.465353 TGAACCAACATGATGACATATTGTT 57.535 32.000 4.25 8.83 38.70 2.83
63 64 7.465353 TTGAACCAACATGATGACATATTGT 57.535 32.000 4.25 0.00 38.70 2.71
66 67 8.853126 CCTTATTGAACCAACATGATGACATAT 58.147 33.333 4.25 2.73 35.09 1.78
67 68 8.052141 TCCTTATTGAACCAACATGATGACATA 58.948 33.333 4.25 0.00 35.09 2.29
68 69 6.891361 TCCTTATTGAACCAACATGATGACAT 59.109 34.615 4.25 0.00 37.19 3.06
69 70 6.244654 TCCTTATTGAACCAACATGATGACA 58.755 36.000 4.25 0.00 0.00 3.58
70 71 6.757897 TCCTTATTGAACCAACATGATGAC 57.242 37.500 4.25 0.00 0.00 3.06
71 72 7.631161 GCAATCCTTATTGAACCAACATGATGA 60.631 37.037 4.25 0.00 44.50 2.92
72 73 6.477688 GCAATCCTTATTGAACCAACATGATG 59.522 38.462 0.00 0.00 44.50 3.07
73 74 6.381994 AGCAATCCTTATTGAACCAACATGAT 59.618 34.615 0.00 0.00 44.50 2.45
74 75 5.716228 AGCAATCCTTATTGAACCAACATGA 59.284 36.000 0.00 0.00 44.50 3.07
75 76 5.969423 AGCAATCCTTATTGAACCAACATG 58.031 37.500 2.38 0.00 44.50 3.21
76 77 5.127682 GGAGCAATCCTTATTGAACCAACAT 59.872 40.000 2.38 0.00 44.50 2.71
77 78 4.462483 GGAGCAATCCTTATTGAACCAACA 59.538 41.667 2.38 0.00 44.50 3.33
78 79 4.706962 AGGAGCAATCCTTATTGAACCAAC 59.293 41.667 2.38 0.00 44.50 3.77
79 80 4.934356 AGGAGCAATCCTTATTGAACCAA 58.066 39.130 2.38 0.00 44.50 3.67
80 81 4.526970 GAGGAGCAATCCTTATTGAACCA 58.473 43.478 0.00 0.00 44.50 3.67
81 82 3.885901 GGAGGAGCAATCCTTATTGAACC 59.114 47.826 0.00 4.62 44.50 3.62
82 83 4.336713 GTGGAGGAGCAATCCTTATTGAAC 59.663 45.833 0.00 0.00 44.50 3.18
83 84 4.228210 AGTGGAGGAGCAATCCTTATTGAA 59.772 41.667 0.00 0.00 44.50 2.69
84 85 3.782523 AGTGGAGGAGCAATCCTTATTGA 59.217 43.478 0.00 0.00 44.50 2.57
85 86 3.881688 CAGTGGAGGAGCAATCCTTATTG 59.118 47.826 0.00 0.00 44.53 1.90
86 87 3.117738 CCAGTGGAGGAGCAATCCTTATT 60.118 47.826 1.68 0.00 40.86 1.40
87 88 2.441001 CCAGTGGAGGAGCAATCCTTAT 59.559 50.000 1.68 0.00 40.86 1.73
88 89 1.839994 CCAGTGGAGGAGCAATCCTTA 59.160 52.381 1.68 0.00 40.86 2.69
89 90 0.622665 CCAGTGGAGGAGCAATCCTT 59.377 55.000 1.68 0.00 40.86 3.36
90 91 1.919600 GCCAGTGGAGGAGCAATCCT 61.920 60.000 15.20 0.00 44.06 3.24
91 92 1.452833 GCCAGTGGAGGAGCAATCC 60.453 63.158 15.20 0.00 37.35 3.01
92 93 0.034670 AAGCCAGTGGAGGAGCAATC 60.035 55.000 15.20 0.00 0.00 2.67
93 94 0.407139 AAAGCCAGTGGAGGAGCAAT 59.593 50.000 15.20 0.00 0.00 3.56
94 95 0.185901 AAAAGCCAGTGGAGGAGCAA 59.814 50.000 15.20 0.00 0.00 3.91
95 96 0.250901 GAAAAGCCAGTGGAGGAGCA 60.251 55.000 15.20 0.00 0.00 4.26
96 97 0.037447 AGAAAAGCCAGTGGAGGAGC 59.963 55.000 15.20 0.00 0.00 4.70
97 98 2.834549 TCTAGAAAAGCCAGTGGAGGAG 59.165 50.000 15.20 0.00 0.00 3.69
98 99 2.902608 TCTAGAAAAGCCAGTGGAGGA 58.097 47.619 15.20 0.00 0.00 3.71
99 100 3.539604 CATCTAGAAAAGCCAGTGGAGG 58.460 50.000 15.20 0.00 0.00 4.30
100 101 2.941720 GCATCTAGAAAAGCCAGTGGAG 59.058 50.000 15.20 0.00 0.00 3.86
101 102 2.356125 GGCATCTAGAAAAGCCAGTGGA 60.356 50.000 22.28 0.00 46.26 4.02
102 103 2.019984 GGCATCTAGAAAAGCCAGTGG 58.980 52.381 22.28 4.20 46.26 4.00
108 109 2.421424 CCACTGTGGCATCTAGAAAAGC 59.579 50.000 14.87 1.30 0.00 3.51
109 110 3.679389 ACCACTGTGGCATCTAGAAAAG 58.321 45.455 26.20 0.00 42.67 2.27
110 111 3.788227 ACCACTGTGGCATCTAGAAAA 57.212 42.857 26.20 0.00 42.67 2.29
111 112 3.072330 TCAACCACTGTGGCATCTAGAAA 59.928 43.478 26.20 0.00 42.67 2.52
112 113 2.637382 TCAACCACTGTGGCATCTAGAA 59.363 45.455 26.20 1.35 42.67 2.10
113 114 2.256306 TCAACCACTGTGGCATCTAGA 58.744 47.619 26.20 12.06 42.67 2.43
114 115 2.768253 TCAACCACTGTGGCATCTAG 57.232 50.000 26.20 10.03 42.67 2.43
115 116 3.500448 TTTCAACCACTGTGGCATCTA 57.500 42.857 26.20 7.07 42.67 1.98
116 117 2.363306 TTTCAACCACTGTGGCATCT 57.637 45.000 26.20 4.16 42.67 2.90
117 118 3.665745 AATTTCAACCACTGTGGCATC 57.334 42.857 26.20 0.00 42.67 3.91
118 119 3.642848 AGAAATTTCAACCACTGTGGCAT 59.357 39.130 26.20 13.07 42.67 4.40
119 120 3.030291 AGAAATTTCAACCACTGTGGCA 58.970 40.909 26.20 8.15 42.67 4.92
120 121 3.642705 GAGAAATTTCAACCACTGTGGC 58.357 45.455 26.20 6.95 42.67 5.01
121 122 3.563808 TCGAGAAATTTCAACCACTGTGG 59.436 43.478 24.80 24.80 45.02 4.17
122 123 4.811555 TCGAGAAATTTCAACCACTGTG 57.188 40.909 19.99 0.00 0.00 3.66
123 124 7.174946 ACAATATCGAGAAATTTCAACCACTGT 59.825 33.333 19.99 11.20 0.00 3.55
124 125 7.530010 ACAATATCGAGAAATTTCAACCACTG 58.470 34.615 19.99 10.64 0.00 3.66
125 126 7.148239 GGACAATATCGAGAAATTTCAACCACT 60.148 37.037 19.99 0.00 0.00 4.00
126 127 6.967199 GGACAATATCGAGAAATTTCAACCAC 59.033 38.462 19.99 5.40 0.00 4.16
127 128 6.657117 TGGACAATATCGAGAAATTTCAACCA 59.343 34.615 19.99 10.06 0.00 3.67
128 129 7.083875 TGGACAATATCGAGAAATTTCAACC 57.916 36.000 19.99 7.85 0.00 3.77
129 130 8.616076 AGATGGACAATATCGAGAAATTTCAAC 58.384 33.333 19.99 12.05 0.00 3.18
130 131 8.737168 AGATGGACAATATCGAGAAATTTCAA 57.263 30.769 19.99 5.76 0.00 2.69
131 132 7.442364 GGAGATGGACAATATCGAGAAATTTCA 59.558 37.037 19.99 0.00 0.00 2.69
132 133 7.359598 CGGAGATGGACAATATCGAGAAATTTC 60.360 40.741 10.33 10.33 0.00 2.17
133 134 6.425114 CGGAGATGGACAATATCGAGAAATTT 59.575 38.462 0.00 0.00 0.00 1.82
134 135 5.928839 CGGAGATGGACAATATCGAGAAATT 59.071 40.000 0.00 0.00 0.00 1.82
135 136 5.243954 TCGGAGATGGACAATATCGAGAAAT 59.756 40.000 0.00 0.00 0.00 2.17
136 137 4.583073 TCGGAGATGGACAATATCGAGAAA 59.417 41.667 0.00 0.00 0.00 2.52
137 138 4.023107 GTCGGAGATGGACAATATCGAGAA 60.023 45.833 0.00 0.00 40.67 2.87
138 139 3.502595 GTCGGAGATGGACAATATCGAGA 59.497 47.826 0.00 0.00 40.67 4.04
139 140 3.504134 AGTCGGAGATGGACAATATCGAG 59.496 47.826 0.00 0.00 40.67 4.04
140 141 3.487372 AGTCGGAGATGGACAATATCGA 58.513 45.455 0.00 0.00 40.67 3.59
141 142 3.924918 AGTCGGAGATGGACAATATCG 57.075 47.619 0.00 0.00 40.67 2.92
142 143 5.201713 TCAAGTCGGAGATGGACAATATC 57.798 43.478 0.00 0.00 40.67 1.63
143 144 4.502259 GCTCAAGTCGGAGATGGACAATAT 60.502 45.833 0.00 0.00 40.67 1.28
144 145 3.181475 GCTCAAGTCGGAGATGGACAATA 60.181 47.826 0.00 0.00 40.67 1.90
145 146 2.419297 GCTCAAGTCGGAGATGGACAAT 60.419 50.000 0.00 0.00 40.67 2.71
146 147 1.066858 GCTCAAGTCGGAGATGGACAA 60.067 52.381 0.00 0.00 40.67 3.18
147 148 0.532573 GCTCAAGTCGGAGATGGACA 59.467 55.000 0.00 0.00 40.67 4.02
148 149 0.820871 AGCTCAAGTCGGAGATGGAC 59.179 55.000 0.00 0.00 40.67 4.02
149 150 2.025155 GTAGCTCAAGTCGGAGATGGA 58.975 52.381 0.00 0.00 40.67 3.41
150 151 1.751351 TGTAGCTCAAGTCGGAGATGG 59.249 52.381 0.00 0.00 40.67 3.51
151 152 2.425312 ACTGTAGCTCAAGTCGGAGATG 59.575 50.000 0.00 0.00 40.67 2.90
152 153 2.729194 ACTGTAGCTCAAGTCGGAGAT 58.271 47.619 0.00 0.00 40.67 2.75
153 154 2.201921 ACTGTAGCTCAAGTCGGAGA 57.798 50.000 0.00 0.00 37.05 3.71
154 155 3.190744 TGTTACTGTAGCTCAAGTCGGAG 59.809 47.826 4.57 0.00 37.97 4.63
155 156 3.057736 GTGTTACTGTAGCTCAAGTCGGA 60.058 47.826 4.57 0.00 0.00 4.55
156 157 3.243336 GTGTTACTGTAGCTCAAGTCGG 58.757 50.000 4.57 0.00 0.00 4.79
157 158 3.897325 TGTGTTACTGTAGCTCAAGTCG 58.103 45.455 4.57 0.00 0.00 4.18
158 159 4.686554 CCTTGTGTTACTGTAGCTCAAGTC 59.313 45.833 28.32 7.58 38.19 3.01
159 160 4.344102 TCCTTGTGTTACTGTAGCTCAAGT 59.656 41.667 28.32 6.48 38.19 3.16
160 161 4.686554 GTCCTTGTGTTACTGTAGCTCAAG 59.313 45.833 26.06 26.06 38.99 3.02
161 162 4.344102 AGTCCTTGTGTTACTGTAGCTCAA 59.656 41.667 15.14 15.14 0.00 3.02
162 163 3.895656 AGTCCTTGTGTTACTGTAGCTCA 59.104 43.478 0.00 3.11 0.00 4.26
163 164 4.522722 AGTCCTTGTGTTACTGTAGCTC 57.477 45.455 0.00 0.51 0.00 4.09
164 165 5.163642 CGATAGTCCTTGTGTTACTGTAGCT 60.164 44.000 3.36 0.00 0.00 3.32
165 166 5.035443 CGATAGTCCTTGTGTTACTGTAGC 58.965 45.833 0.00 0.00 0.00 3.58
166 167 6.432607 TCGATAGTCCTTGTGTTACTGTAG 57.567 41.667 0.00 0.00 37.40 2.74
167 168 8.687292 ATATCGATAGTCCTTGTGTTACTGTA 57.313 34.615 11.41 0.00 37.40 2.74
168 169 5.916661 ATCGATAGTCCTTGTGTTACTGT 57.083 39.130 0.00 0.00 37.40 3.55
169 170 7.096023 GCAATATCGATAGTCCTTGTGTTACTG 60.096 40.741 11.41 0.00 37.40 2.74
170 171 6.924060 GCAATATCGATAGTCCTTGTGTTACT 59.076 38.462 11.41 0.00 37.40 2.24
171 172 6.924060 AGCAATATCGATAGTCCTTGTGTTAC 59.076 38.462 11.41 0.00 37.40 2.50
172 173 7.050970 AGCAATATCGATAGTCCTTGTGTTA 57.949 36.000 11.41 0.00 37.40 2.41
173 174 5.918608 AGCAATATCGATAGTCCTTGTGTT 58.081 37.500 11.41 0.00 37.40 3.32
174 175 5.069119 TGAGCAATATCGATAGTCCTTGTGT 59.931 40.000 11.41 2.97 37.40 3.72
175 176 5.532557 TGAGCAATATCGATAGTCCTTGTG 58.467 41.667 11.41 0.00 37.40 3.33
176 177 5.791336 TGAGCAATATCGATAGTCCTTGT 57.209 39.130 11.41 2.26 37.40 3.16
177 178 6.312426 GGAATGAGCAATATCGATAGTCCTTG 59.688 42.308 11.41 11.02 37.40 3.61
178 179 6.014242 TGGAATGAGCAATATCGATAGTCCTT 60.014 38.462 11.41 4.65 37.40 3.36
179 180 5.481824 TGGAATGAGCAATATCGATAGTCCT 59.518 40.000 11.41 3.32 37.40 3.85
180 181 5.724328 TGGAATGAGCAATATCGATAGTCC 58.276 41.667 11.41 6.46 37.40 3.85
181 182 7.840342 AATGGAATGAGCAATATCGATAGTC 57.160 36.000 11.41 5.75 37.40 2.59
182 183 8.509690 CAAAATGGAATGAGCAATATCGATAGT 58.490 33.333 11.41 5.29 37.40 2.12
183 184 8.509690 ACAAAATGGAATGAGCAATATCGATAG 58.490 33.333 11.41 0.00 0.00 2.08
184 185 8.394971 ACAAAATGGAATGAGCAATATCGATA 57.605 30.769 7.75 7.75 0.00 2.92
185 186 7.281040 ACAAAATGGAATGAGCAATATCGAT 57.719 32.000 2.16 2.16 0.00 3.59
186 187 6.698008 ACAAAATGGAATGAGCAATATCGA 57.302 33.333 0.00 0.00 0.00 3.59
187 188 7.760131 AAACAAAATGGAATGAGCAATATCG 57.240 32.000 0.00 0.00 0.00 2.92
188 189 9.252962 CCTAAACAAAATGGAATGAGCAATATC 57.747 33.333 0.00 0.00 0.00 1.63
189 190 7.712205 GCCTAAACAAAATGGAATGAGCAATAT 59.288 33.333 0.00 0.00 0.00 1.28
190 191 7.041107 GCCTAAACAAAATGGAATGAGCAATA 58.959 34.615 0.00 0.00 0.00 1.90
191 192 5.876460 GCCTAAACAAAATGGAATGAGCAAT 59.124 36.000 0.00 0.00 0.00 3.56
192 193 5.237048 GCCTAAACAAAATGGAATGAGCAA 58.763 37.500 0.00 0.00 0.00 3.91
193 194 4.322650 GGCCTAAACAAAATGGAATGAGCA 60.323 41.667 0.00 0.00 0.00 4.26
194 195 4.081476 AGGCCTAAACAAAATGGAATGAGC 60.081 41.667 1.29 0.00 0.00 4.26
195 196 5.185635 TCAGGCCTAAACAAAATGGAATGAG 59.814 40.000 3.98 0.00 0.00 2.90
196 197 5.083122 TCAGGCCTAAACAAAATGGAATGA 58.917 37.500 3.98 0.00 0.00 2.57
205 206 1.539388 CACGCATCAGGCCTAAACAAA 59.461 47.619 3.98 0.00 40.31 2.83
207 208 0.323302 TCACGCATCAGGCCTAAACA 59.677 50.000 3.98 0.00 40.31 2.83
251 252 8.076178 ACCTGTCGTCAAATTCTTTTATTCAAG 58.924 33.333 0.00 0.00 0.00 3.02
277 278 8.940768 TTTTCAATCATCTACGTCACATGATA 57.059 30.769 14.07 1.77 36.45 2.15
324 325 4.828072 AAGTATGGTGGAGGACTTCTTC 57.172 45.455 0.00 0.00 0.00 2.87
327 328 5.801380 TGTTTAAGTATGGTGGAGGACTTC 58.199 41.667 0.00 0.00 34.15 3.01
331 332 6.636454 AGATTGTTTAAGTATGGTGGAGGA 57.364 37.500 0.00 0.00 0.00 3.71
358 361 8.552034 CAGACAGGTGAGAAAAAGTTTACTTAG 58.448 37.037 0.00 0.00 34.61 2.18
382 385 7.551035 ACTGCTTAAGATTGATTAAGAGCAG 57.449 36.000 17.49 17.49 42.77 4.24
440 443 2.906354 ACAAGTTGTCTGCTCTTTCGT 58.094 42.857 1.64 0.00 0.00 3.85
442 445 6.793492 AGATTACAAGTTGTCTGCTCTTTC 57.207 37.500 12.82 0.00 0.00 2.62
527 533 5.607171 TGGTTTGGTATGTGGGGTTAATTTT 59.393 36.000 0.00 0.00 0.00 1.82
572 578 2.227388 GTGACATTGCAGGAGAGGTTTG 59.773 50.000 0.00 0.00 0.00 2.93
580 586 1.973515 AGTGAGAGTGACATTGCAGGA 59.026 47.619 0.00 0.00 0.00 3.86
586 2723 2.233431 GGAGAGCAGTGAGAGTGACATT 59.767 50.000 0.00 0.00 0.00 2.71
631 2768 3.701040 GAGAAGAGATGAAGAGAGTGGCT 59.299 47.826 0.00 0.00 0.00 4.75
757 2901 3.823304 GCTTCTTGTTCTTGGAATGGACT 59.177 43.478 0.00 0.00 0.00 3.85
764 2908 3.900601 AGAGAGAGCTTCTTGTTCTTGGA 59.099 43.478 0.00 0.00 36.35 3.53
796 2941 1.864669 AAGCAGAAGAGAGAGAGGGG 58.135 55.000 0.00 0.00 0.00 4.79
854 3017 0.958822 CTGGTGGTTTTGTACTGGGC 59.041 55.000 0.00 0.00 0.00 5.36
873 3036 0.456221 TCTGTGAAGGTAGCTAGCGC 59.544 55.000 16.82 13.37 0.00 5.92
883 3046 4.154918 GGTCTATTGCTTTGTCTGTGAAGG 59.845 45.833 0.00 0.00 0.00 3.46
889 3052 5.349817 CAGTAGTGGTCTATTGCTTTGTCTG 59.650 44.000 0.00 0.00 29.70 3.51
900 3063 6.014771 TGTATCCAGTCAGTAGTGGTCTAT 57.985 41.667 0.00 0.00 45.28 1.98
940 3103 2.126071 TGCTTCACTCGCTACGGC 60.126 61.111 0.00 0.00 0.00 5.68
948 3111 1.357991 GGCTTCGCTCTGCTTCACTC 61.358 60.000 0.00 0.00 0.00 3.51
964 3127 1.885163 GAGCAAGCAAGGCAATGGCT 61.885 55.000 2.53 2.53 41.24 4.75
984 3147 2.755876 ATGGCGACCTCGAGCTCA 60.756 61.111 15.40 0.00 43.02 4.26
1283 3460 2.186384 CCTTCCTCCTCTGCTGCG 59.814 66.667 0.00 0.00 0.00 5.18
1938 4151 2.798283 CGAAAGAAACGCTAGTTGACCA 59.202 45.455 0.00 0.00 41.05 4.02
1993 4236 1.743995 CGTAAACGCCCCCTGAAGG 60.744 63.158 0.00 0.00 0.00 3.46
2036 4287 5.972382 GCAACAAAACGTAGTATTTGGTTCA 59.028 36.000 13.40 0.00 45.00 3.18
2169 4433 3.999663 TGACGATACAATGACAACATGCA 59.000 39.130 0.00 0.00 36.79 3.96
2216 4482 6.418057 AAATGAAGGCCAAAACTACATGAA 57.582 33.333 5.01 0.00 0.00 2.57
2244 4510 9.959693 AGGCCCTAAGATATTACTGTATCATAT 57.040 33.333 0.00 0.00 34.27 1.78
2245 4511 9.422681 GAGGCCCTAAGATATTACTGTATCATA 57.577 37.037 0.00 0.00 34.27 2.15
2246 4512 8.125733 AGAGGCCCTAAGATATTACTGTATCAT 58.874 37.037 0.00 0.00 34.27 2.45
2247 4513 7.479579 AGAGGCCCTAAGATATTACTGTATCA 58.520 38.462 0.00 0.00 34.27 2.15
2248 4514 7.964666 AGAGGCCCTAAGATATTACTGTATC 57.035 40.000 0.00 0.00 0.00 2.24
2249 4515 8.598041 CAAAGAGGCCCTAAGATATTACTGTAT 58.402 37.037 0.00 0.00 0.00 2.29
2250 4516 7.787904 TCAAAGAGGCCCTAAGATATTACTGTA 59.212 37.037 0.00 0.00 0.00 2.74
2251 4517 6.615726 TCAAAGAGGCCCTAAGATATTACTGT 59.384 38.462 0.00 0.00 0.00 3.55
2252 4518 7.067496 TCAAAGAGGCCCTAAGATATTACTG 57.933 40.000 0.00 0.00 0.00 2.74
2253 4519 7.880265 ATCAAAGAGGCCCTAAGATATTACT 57.120 36.000 0.00 0.00 0.00 2.24
2254 4520 8.157476 TGAATCAAAGAGGCCCTAAGATATTAC 58.843 37.037 0.00 0.00 0.00 1.89
2255 4521 8.275187 TGAATCAAAGAGGCCCTAAGATATTA 57.725 34.615 0.00 0.00 0.00 0.98
2256 4522 7.154191 TGAATCAAAGAGGCCCTAAGATATT 57.846 36.000 0.00 0.00 0.00 1.28
2257 4523 6.770286 TGAATCAAAGAGGCCCTAAGATAT 57.230 37.500 0.00 0.00 0.00 1.63
2258 4524 6.575244 TTGAATCAAAGAGGCCCTAAGATA 57.425 37.500 0.00 0.00 0.00 1.98
2286 4560 2.985139 GTCCGTCGAAGTTCCTAACAAG 59.015 50.000 0.00 0.00 0.00 3.16
2303 4577 4.324267 AGTTACCAAAGGATTCAAGTCCG 58.676 43.478 0.00 0.00 43.27 4.79
2304 4578 5.561679 AGAGTTACCAAAGGATTCAAGTCC 58.438 41.667 0.00 0.00 38.62 3.85
2305 4579 8.794335 ATAAGAGTTACCAAAGGATTCAAGTC 57.206 34.615 0.00 0.00 0.00 3.01
2347 4621 9.558396 TCTTGATTGCATTAAGAAAAACCAAAT 57.442 25.926 5.61 0.00 32.72 2.32
2361 4636 8.454570 AAGATTTTGGTTTTCTTGATTGCATT 57.545 26.923 0.00 0.00 0.00 3.56
2385 4661 9.685276 AATGTCATGTCCACTTGAATCTTATAA 57.315 29.630 0.00 0.00 32.82 0.98
2420 4696 5.875359 ACTATTGAACCCTTGAGTCGATTTC 59.125 40.000 0.00 0.00 0.00 2.17
2428 4705 3.927142 GTCGTCACTATTGAACCCTTGAG 59.073 47.826 0.00 0.00 31.90 3.02
2436 4713 5.940192 AAAATGCAGTCGTCACTATTGAA 57.060 34.783 0.00 0.00 31.90 2.69
2438 4715 6.092122 TCCTAAAAATGCAGTCGTCACTATTG 59.908 38.462 0.00 0.00 0.00 1.90
2439 4716 6.170506 TCCTAAAAATGCAGTCGTCACTATT 58.829 36.000 0.00 0.00 0.00 1.73
2440 4717 5.730550 TCCTAAAAATGCAGTCGTCACTAT 58.269 37.500 0.00 0.00 0.00 2.12
2441 4718 5.142061 TCCTAAAAATGCAGTCGTCACTA 57.858 39.130 0.00 0.00 0.00 2.74
2442 4719 4.002906 TCCTAAAAATGCAGTCGTCACT 57.997 40.909 0.00 0.00 0.00 3.41
2443 4720 4.651994 CATCCTAAAAATGCAGTCGTCAC 58.348 43.478 0.00 0.00 0.00 3.67
2444 4721 3.126858 GCATCCTAAAAATGCAGTCGTCA 59.873 43.478 3.35 0.00 46.93 4.35
2445 4722 3.685058 GCATCCTAAAAATGCAGTCGTC 58.315 45.455 3.35 0.00 46.93 4.20
2446 4723 3.764885 GCATCCTAAAAATGCAGTCGT 57.235 42.857 3.35 0.00 46.93 4.34
2497 4806 2.549992 CCTTGTCAATGAACCAGTCGGA 60.550 50.000 0.00 0.00 35.59 4.55
2498 4807 1.806542 CCTTGTCAATGAACCAGTCGG 59.193 52.381 0.00 0.00 38.77 4.79
2501 4810 3.576078 TGACCTTGTCAATGAACCAGT 57.424 42.857 0.00 0.00 39.78 4.00
2526 4835 1.699730 GCCACACCTTTACCCAAGTT 58.300 50.000 0.00 0.00 0.00 2.66
2531 4840 1.654023 GATGCGCCACACCTTTACCC 61.654 60.000 4.18 0.00 0.00 3.69
2533 4842 1.017177 TCGATGCGCCACACCTTTAC 61.017 55.000 4.18 0.00 0.00 2.01
2540 4849 2.125713 AATCGTCGATGCGCCACA 60.126 55.556 8.83 0.00 0.00 4.17
2542 4851 1.215014 GATGAATCGTCGATGCGCCA 61.215 55.000 8.83 5.53 0.00 5.69
2563 4872 0.782384 CGAATGACTATTACCGCCGC 59.218 55.000 0.00 0.00 0.00 6.53
2564 4873 2.410785 TCGAATGACTATTACCGCCG 57.589 50.000 0.00 0.00 0.00 6.46
2565 4874 2.993899 CCATCGAATGACTATTACCGCC 59.006 50.000 0.00 0.00 0.00 6.13
2566 4875 3.650139 ACCATCGAATGACTATTACCGC 58.350 45.455 0.00 0.00 0.00 5.68
2567 4876 4.235360 GGACCATCGAATGACTATTACCG 58.765 47.826 0.00 0.00 0.00 4.02
2568 4877 5.209818 TGGACCATCGAATGACTATTACC 57.790 43.478 0.00 0.00 0.00 2.85
2569 4878 5.639506 CCATGGACCATCGAATGACTATTAC 59.360 44.000 5.56 0.00 0.00 1.89
2570 4879 5.306937 ACCATGGACCATCGAATGACTATTA 59.693 40.000 21.47 0.00 0.00 0.98
2572 4881 3.648067 ACCATGGACCATCGAATGACTAT 59.352 43.478 21.47 0.00 0.00 2.12
2573 4882 3.038280 ACCATGGACCATCGAATGACTA 58.962 45.455 21.47 0.00 0.00 2.59
2575 4884 2.158900 AGACCATGGACCATCGAATGAC 60.159 50.000 21.47 0.00 0.00 3.06
2576 4885 2.118679 AGACCATGGACCATCGAATGA 58.881 47.619 21.47 0.00 0.00 2.57
2577 4886 2.627515 AGACCATGGACCATCGAATG 57.372 50.000 21.47 0.00 0.00 2.67
2578 4887 2.505407 TGAAGACCATGGACCATCGAAT 59.495 45.455 21.47 0.00 0.00 3.34
2609 4923 9.881773 AATACAAGACCCCAATACATGATAATT 57.118 29.630 0.00 0.00 0.00 1.40
2610 4924 9.881773 AAATACAAGACCCCAATACATGATAAT 57.118 29.630 0.00 0.00 0.00 1.28
2613 4927 9.300681 CATAAATACAAGACCCCAATACATGAT 57.699 33.333 0.00 0.00 0.00 2.45
2614 4928 7.723616 CCATAAATACAAGACCCCAATACATGA 59.276 37.037 0.00 0.00 0.00 3.07
2615 4929 7.505585 ACCATAAATACAAGACCCCAATACATG 59.494 37.037 0.00 0.00 0.00 3.21
2616 4930 7.505585 CACCATAAATACAAGACCCCAATACAT 59.494 37.037 0.00 0.00 0.00 2.29
2618 4932 7.057894 TCACCATAAATACAAGACCCCAATAC 58.942 38.462 0.00 0.00 0.00 1.89
2619 4933 7.214460 TCACCATAAATACAAGACCCCAATA 57.786 36.000 0.00 0.00 0.00 1.90
2622 4936 5.522315 TTCACCATAAATACAAGACCCCA 57.478 39.130 0.00 0.00 0.00 4.96
2623 4937 6.365520 AGATTCACCATAAATACAAGACCCC 58.634 40.000 0.00 0.00 0.00 4.95
2624 4938 7.881775 AAGATTCACCATAAATACAAGACCC 57.118 36.000 0.00 0.00 0.00 4.46
2625 4939 9.573133 CAAAAGATTCACCATAAATACAAGACC 57.427 33.333 0.00 0.00 0.00 3.85
2638 4952 8.648698 TCCAAATCTATTCAAAAGATTCACCA 57.351 30.769 0.00 0.00 41.68 4.17
2639 4953 9.741647 GATCCAAATCTATTCAAAAGATTCACC 57.258 33.333 0.00 0.00 41.68 4.02
2640 4954 9.741647 GGATCCAAATCTATTCAAAAGATTCAC 57.258 33.333 6.95 0.00 41.68 3.18
2641 4955 9.705103 AGGATCCAAATCTATTCAAAAGATTCA 57.295 29.630 15.82 0.00 41.68 2.57
2646 4960 9.722056 CGTAAAGGATCCAAATCTATTCAAAAG 57.278 33.333 15.82 0.00 32.12 2.27
2647 4961 9.456147 TCGTAAAGGATCCAAATCTATTCAAAA 57.544 29.630 15.82 0.00 32.12 2.44
2648 4962 9.456147 TTCGTAAAGGATCCAAATCTATTCAAA 57.544 29.630 15.82 0.00 32.12 2.69
2649 4963 9.456147 TTTCGTAAAGGATCCAAATCTATTCAA 57.544 29.630 15.82 0.00 32.12 2.69
2650 4964 9.456147 TTTTCGTAAAGGATCCAAATCTATTCA 57.544 29.630 15.82 0.00 32.12 2.57
2674 4988 5.883503 TGAAACGTACTGGTTCACTTTTT 57.116 34.783 12.21 0.00 0.00 1.94
2675 4989 5.732247 GCATGAAACGTACTGGTTCACTTTT 60.732 40.000 16.64 3.11 0.00 2.27
2676 4990 4.261031 GCATGAAACGTACTGGTTCACTTT 60.261 41.667 16.64 3.39 0.00 2.66
2677 4991 3.250040 GCATGAAACGTACTGGTTCACTT 59.750 43.478 16.64 3.95 0.00 3.16
2678 4992 2.806244 GCATGAAACGTACTGGTTCACT 59.194 45.455 16.64 7.18 0.00 3.41
2679 4993 2.806244 AGCATGAAACGTACTGGTTCAC 59.194 45.455 16.64 8.39 0.00 3.18
2680 4994 3.120321 AGCATGAAACGTACTGGTTCA 57.880 42.857 16.63 16.63 0.00 3.18
2681 4995 3.250040 ACAAGCATGAAACGTACTGGTTC 59.750 43.478 0.00 8.08 0.00 3.62
2682 4996 3.211045 ACAAGCATGAAACGTACTGGTT 58.789 40.909 0.00 0.00 0.00 3.67
2683 4997 2.806244 GACAAGCATGAAACGTACTGGT 59.194 45.455 0.00 0.00 0.00 4.00
2684 4998 3.067106 AGACAAGCATGAAACGTACTGG 58.933 45.455 0.00 0.00 0.00 4.00
2685 4999 4.732285 AAGACAAGCATGAAACGTACTG 57.268 40.909 0.00 0.00 0.00 2.74
2686 5000 5.751243 AAAAGACAAGCATGAAACGTACT 57.249 34.783 0.00 0.00 0.00 2.73
2714 5028 9.528018 GGTTCACATGATTCTAAAAACTCAAAA 57.472 29.630 0.00 0.00 0.00 2.44
2715 5029 8.690884 TGGTTCACATGATTCTAAAAACTCAAA 58.309 29.630 0.00 0.00 0.00 2.69
2716 5030 8.231692 TGGTTCACATGATTCTAAAAACTCAA 57.768 30.769 0.00 0.00 0.00 3.02
2717 5031 7.815840 TGGTTCACATGATTCTAAAAACTCA 57.184 32.000 0.00 0.00 0.00 3.41
2718 5032 9.132521 CATTGGTTCACATGATTCTAAAAACTC 57.867 33.333 0.00 0.00 0.00 3.01
2719 5033 8.859090 TCATTGGTTCACATGATTCTAAAAACT 58.141 29.630 0.00 0.00 0.00 2.66
2720 5034 9.132521 CTCATTGGTTCACATGATTCTAAAAAC 57.867 33.333 0.00 0.00 0.00 2.43
2721 5035 8.306038 CCTCATTGGTTCACATGATTCTAAAAA 58.694 33.333 0.00 0.00 0.00 1.94
2722 5036 7.577426 GCCTCATTGGTTCACATGATTCTAAAA 60.577 37.037 0.00 0.00 38.35 1.52
2723 5037 6.127647 GCCTCATTGGTTCACATGATTCTAAA 60.128 38.462 0.00 0.00 38.35 1.85
2724 5038 5.357878 GCCTCATTGGTTCACATGATTCTAA 59.642 40.000 0.00 0.00 38.35 2.10
2725 5039 4.883585 GCCTCATTGGTTCACATGATTCTA 59.116 41.667 0.00 0.00 38.35 2.10
2726 5040 3.698040 GCCTCATTGGTTCACATGATTCT 59.302 43.478 0.00 0.00 38.35 2.40
2727 5041 3.444742 TGCCTCATTGGTTCACATGATTC 59.555 43.478 0.00 0.00 38.35 2.52
2728 5042 3.433343 TGCCTCATTGGTTCACATGATT 58.567 40.909 0.00 0.00 38.35 2.57
2729 5043 3.090210 TGCCTCATTGGTTCACATGAT 57.910 42.857 0.00 0.00 38.35 2.45
2730 5044 2.583024 TGCCTCATTGGTTCACATGA 57.417 45.000 0.00 0.00 38.35 3.07
2731 5045 3.880047 AATGCCTCATTGGTTCACATG 57.120 42.857 0.00 0.00 38.35 3.21
2732 5046 6.154877 TGAATTAATGCCTCATTGGTTCACAT 59.845 34.615 12.83 0.00 35.63 3.21
2733 5047 5.479724 TGAATTAATGCCTCATTGGTTCACA 59.520 36.000 12.83 0.00 35.63 3.58
2734 5048 5.964758 TGAATTAATGCCTCATTGGTTCAC 58.035 37.500 12.83 0.00 35.63 3.18
2735 5049 6.602410 TTGAATTAATGCCTCATTGGTTCA 57.398 33.333 12.83 12.83 37.08 3.18
2736 5050 8.496707 AATTTGAATTAATGCCTCATTGGTTC 57.503 30.769 2.57 6.92 35.54 3.62
2737 5051 8.732531 CAAATTTGAATTAATGCCTCATTGGTT 58.267 29.630 13.08 0.00 35.54 3.67
2738 5052 7.148205 GCAAATTTGAATTAATGCCTCATTGGT 60.148 33.333 22.31 0.00 35.54 3.67
2739 5053 7.148222 TGCAAATTTGAATTAATGCCTCATTGG 60.148 33.333 22.31 0.00 35.54 3.16
2740 5054 7.694784 GTGCAAATTTGAATTAATGCCTCATTG 59.305 33.333 22.31 0.00 35.54 2.82
2741 5055 7.413219 CGTGCAAATTTGAATTAATGCCTCATT 60.413 33.333 22.31 0.00 37.80 2.57
2742 5056 6.036300 CGTGCAAATTTGAATTAATGCCTCAT 59.964 34.615 22.31 0.00 33.38 2.90
2743 5057 5.348179 CGTGCAAATTTGAATTAATGCCTCA 59.652 36.000 22.31 2.73 33.38 3.86
2744 5058 5.348451 ACGTGCAAATTTGAATTAATGCCTC 59.652 36.000 22.31 0.05 33.38 4.70
2745 5059 5.237048 ACGTGCAAATTTGAATTAATGCCT 58.763 33.333 22.31 0.00 33.38 4.75
2746 5060 5.529014 ACGTGCAAATTTGAATTAATGCC 57.471 34.783 22.31 1.28 33.38 4.40
2765 5079 9.978044 GGATAAGGACTTCTACAATTATAACGT 57.022 33.333 0.00 0.00 0.00 3.99
2772 5086 7.643123 ACCAATGGATAAGGACTTCTACAATT 58.357 34.615 6.16 0.00 0.00 2.32
2779 5093 3.467803 CCGACCAATGGATAAGGACTTC 58.532 50.000 6.16 0.00 0.00 3.01
2781 5095 1.141053 GCCGACCAATGGATAAGGACT 59.859 52.381 6.16 0.00 0.00 3.85
2783 5097 1.140852 CTGCCGACCAATGGATAAGGA 59.859 52.381 6.16 0.00 0.00 3.36
2790 5104 0.321564 TTCTGACTGCCGACCAATGG 60.322 55.000 0.00 0.00 0.00 3.16
2794 5108 1.367471 CACTTCTGACTGCCGACCA 59.633 57.895 0.00 0.00 0.00 4.02
2802 5123 3.758755 TCACATTCTGCACTTCTGACT 57.241 42.857 0.00 0.00 0.00 3.41
2835 5156 1.985159 ACCTGCCTATCAGTCCACAAA 59.015 47.619 0.00 0.00 41.25 2.83
2867 5188 9.887406 CCACAAACGTGACTTTTATATTAGTTT 57.113 29.630 0.00 0.00 36.43 2.66
2868 5189 9.275398 TCCACAAACGTGACTTTTATATTAGTT 57.725 29.630 0.00 0.00 36.43 2.24
2869 5190 8.715088 GTCCACAAACGTGACTTTTATATTAGT 58.285 33.333 0.00 0.00 36.43 2.24
2870 5191 8.932791 AGTCCACAAACGTGACTTTTATATTAG 58.067 33.333 0.00 0.00 36.43 1.73
2871 5192 8.714179 CAGTCCACAAACGTGACTTTTATATTA 58.286 33.333 2.95 0.00 36.43 0.98
2872 5193 7.442969 TCAGTCCACAAACGTGACTTTTATATT 59.557 33.333 2.95 0.00 36.43 1.28
2873 5194 6.932400 TCAGTCCACAAACGTGACTTTTATAT 59.068 34.615 2.95 0.00 36.43 0.86
2874 5195 6.282167 TCAGTCCACAAACGTGACTTTTATA 58.718 36.000 2.95 0.00 36.43 0.98
2875 5196 5.120399 TCAGTCCACAAACGTGACTTTTAT 58.880 37.500 2.95 0.00 36.43 1.40
2876 5197 4.505808 TCAGTCCACAAACGTGACTTTTA 58.494 39.130 2.95 0.00 36.43 1.52
2877 5198 3.340034 TCAGTCCACAAACGTGACTTTT 58.660 40.909 2.95 0.00 36.43 2.27
2878 5199 2.980568 TCAGTCCACAAACGTGACTTT 58.019 42.857 2.95 0.00 36.43 2.66
2879 5200 2.684001 TCAGTCCACAAACGTGACTT 57.316 45.000 2.95 0.00 36.43 3.01
2880 5201 2.910688 ATCAGTCCACAAACGTGACT 57.089 45.000 0.00 0.00 36.43 3.41
2881 5202 2.993899 CCTATCAGTCCACAAACGTGAC 59.006 50.000 0.00 0.00 36.43 3.67
2882 5203 2.611971 GCCTATCAGTCCACAAACGTGA 60.612 50.000 0.00 0.00 36.43 4.35
2883 5204 1.732259 GCCTATCAGTCCACAAACGTG 59.268 52.381 0.00 0.00 0.00 4.49
2884 5205 1.346395 TGCCTATCAGTCCACAAACGT 59.654 47.619 0.00 0.00 0.00 3.99
2885 5206 2.002586 CTGCCTATCAGTCCACAAACG 58.997 52.381 0.00 0.00 38.02 3.60
2886 5207 2.290323 ACCTGCCTATCAGTCCACAAAC 60.290 50.000 0.00 0.00 41.25 2.93
2887 5208 1.985159 ACCTGCCTATCAGTCCACAAA 59.015 47.619 0.00 0.00 41.25 2.83
2888 5209 1.656587 ACCTGCCTATCAGTCCACAA 58.343 50.000 0.00 0.00 41.25 3.33
2889 5210 2.108168 GTACCTGCCTATCAGTCCACA 58.892 52.381 0.00 0.00 41.25 4.17
2890 5211 2.362717 GAGTACCTGCCTATCAGTCCAC 59.637 54.545 0.00 0.00 41.25 4.02
2891 5212 2.667470 GAGTACCTGCCTATCAGTCCA 58.333 52.381 0.00 0.00 41.25 4.02
2892 5213 1.964933 GGAGTACCTGCCTATCAGTCC 59.035 57.143 0.00 0.00 41.25 3.85
2893 5214 1.964933 GGGAGTACCTGCCTATCAGTC 59.035 57.143 0.00 0.00 38.98 3.51
2894 5215 2.089600 GGGAGTACCTGCCTATCAGT 57.910 55.000 0.00 0.00 38.98 3.41
2960 5281 9.813446 CCTCCGTAAACTAATATAAGAGTGTTT 57.187 33.333 0.00 0.00 0.00 2.83
2961 5282 8.419442 CCCTCCGTAAACTAATATAAGAGTGTT 58.581 37.037 0.00 0.00 0.00 3.32
2962 5283 7.781693 TCCCTCCGTAAACTAATATAAGAGTGT 59.218 37.037 0.00 0.00 0.00 3.55
2963 5284 8.174733 TCCCTCCGTAAACTAATATAAGAGTG 57.825 38.462 0.00 0.00 0.00 3.51
2964 5285 8.003629 ACTCCCTCCGTAAACTAATATAAGAGT 58.996 37.037 0.00 0.00 0.00 3.24
2965 5286 8.406730 ACTCCCTCCGTAAACTAATATAAGAG 57.593 38.462 0.00 0.00 0.00 2.85
2966 5287 9.289782 GTACTCCCTCCGTAAACTAATATAAGA 57.710 37.037 0.00 0.00 0.00 2.10
2967 5288 9.294614 AGTACTCCCTCCGTAAACTAATATAAG 57.705 37.037 0.00 0.00 0.00 1.73
2969 5290 9.726438 GTAGTACTCCCTCCGTAAACTAATATA 57.274 37.037 0.00 0.00 0.00 0.86
2970 5291 7.389053 CGTAGTACTCCCTCCGTAAACTAATAT 59.611 40.741 0.00 0.00 0.00 1.28
2971 5292 6.706270 CGTAGTACTCCCTCCGTAAACTAATA 59.294 42.308 0.00 0.00 0.00 0.98
2972 5293 5.529060 CGTAGTACTCCCTCCGTAAACTAAT 59.471 44.000 0.00 0.00 0.00 1.73
2973 5294 4.876107 CGTAGTACTCCCTCCGTAAACTAA 59.124 45.833 0.00 0.00 0.00 2.24
2974 5295 4.081087 ACGTAGTACTCCCTCCGTAAACTA 60.081 45.833 0.00 0.00 41.94 2.24
2975 5296 3.274288 CGTAGTACTCCCTCCGTAAACT 58.726 50.000 0.00 0.00 0.00 2.66
2976 5297 3.010420 ACGTAGTACTCCCTCCGTAAAC 58.990 50.000 0.00 0.00 41.94 2.01
2977 5298 3.350219 ACGTAGTACTCCCTCCGTAAA 57.650 47.619 0.00 0.00 41.94 2.01
2978 5299 4.952471 TGGACGTAGTACTCCCTCCGTAA 61.952 52.174 0.00 0.00 45.52 3.18
2979 5300 3.481048 TGGACGTAGTACTCCCTCCGTA 61.481 54.545 0.00 0.00 45.52 4.02
2980 5301 2.792952 TGGACGTAGTACTCCCTCCGT 61.793 57.143 0.00 1.27 45.52 4.69
2981 5302 0.107508 TGGACGTAGTACTCCCTCCG 60.108 60.000 0.00 0.00 45.52 4.63
2982 5303 1.955080 CATGGACGTAGTACTCCCTCC 59.045 57.143 0.00 2.06 45.52 4.30
2983 5304 1.337387 GCATGGACGTAGTACTCCCTC 59.663 57.143 0.00 0.00 45.52 4.30
2984 5305 1.341679 TGCATGGACGTAGTACTCCCT 60.342 52.381 0.00 4.44 45.52 4.20
2985 5306 1.108776 TGCATGGACGTAGTACTCCC 58.891 55.000 0.00 8.07 45.52 4.30
2986 5307 2.953466 TTGCATGGACGTAGTACTCC 57.047 50.000 0.00 10.29 45.52 3.85
3014 5335 1.879380 TGTTGCTACGTACGTACCTGT 59.121 47.619 23.60 14.61 0.00 4.00
3015 5336 2.617250 TGTTGCTACGTACGTACCTG 57.383 50.000 23.60 15.29 0.00 4.00


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.