Multiple sequence alignment - TraesCS1D01G420900
Loading Multiple Alignment...
BLAST Results
BLAST Results - Input Sequence
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this
to extract flanking regions for cloning. If the result of the multiple sequence alignment is
not as expected, these results could be used for further investigation.
qseqid
sseqid
percentage.identical
alignment.length
no.mismatch
no.gap.openings
qstart
qend
sstart
send
evalue
bitscore
0
TraesCS1D01G420900
chr1D
100.000
3560
0
0
1
3560
477188031
477191590
0.000000e+00
6575.0
1
TraesCS1D01G420900
chr1D
81.826
1227
194
24
1203
2416
474375316
474376526
0.000000e+00
1003.0
2
TraesCS1D01G420900
chr1A
91.918
2685
113
40
579
3227
573241986
573244602
0.000000e+00
3661.0
3
TraesCS1D01G420900
chr1A
81.189
1228
200
26
1203
2416
568730023
568728813
0.000000e+00
959.0
4
TraesCS1D01G420900
chr1A
88.212
509
29
13
1
492
573241469
573241963
2.380000e-161
579.0
5
TraesCS1D01G420900
chr1B
90.270
2847
134
64
1
2789
664775655
664778416
0.000000e+00
3591.0
6
TraesCS1D01G420900
chr1B
82.248
1228
187
25
1203
2416
659723901
659725111
0.000000e+00
1031.0
7
TraesCS1D01G420900
chr1B
91.549
213
12
4
3004
3216
664778490
664778696
4.500000e-74
289.0
8
TraesCS1D01G420900
chr1B
94.286
70
2
1
2896
2963
664778424
664778493
4.860000e-19
106.0
9
TraesCS1D01G420900
chr7A
82.148
1518
239
28
1015
2518
545934338
545935837
0.000000e+00
1273.0
10
TraesCS1D01G420900
chr7B
82.450
1453
223
24
1057
2499
470836956
470835526
0.000000e+00
1242.0
11
TraesCS1D01G420900
chr7D
82.037
1453
229
25
1057
2499
451187790
451186360
0.000000e+00
1208.0
12
TraesCS1D01G420900
chr7D
73.141
901
207
27
1532
2416
617197737
617198618
1.250000e-74
291.0
13
TraesCS1D01G420900
chr7D
81.250
112
17
4
1203
1312
400942032
400942141
1.760000e-13
87.9
14
TraesCS1D01G420900
chr4A
81.545
699
115
12
1736
2427
62538720
62539411
6.670000e-157
564.0
15
TraesCS1D01G420900
chr3D
81.250
112
17
4
1203
1312
255526273
255526382
1.760000e-13
87.9
BLAST Results - HSPs grouped
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the
BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are
purely upstream or downstream may be removed if they don't overlap both primers.
query
scaffold
start
end
length
rev.comp
avg.bitscore
max.bitscore
avg.percent.identical
query.start
query.end
num_hsp
groupid
homo_length
0
TraesCS1D01G420900
chr1D
477188031
477191590
3559
False
6575.000000
6575
100.000
1
3560
1
chr1D.!!$F2
3559
1
TraesCS1D01G420900
chr1D
474375316
474376526
1210
False
1003.000000
1003
81.826
1203
2416
1
chr1D.!!$F1
1213
2
TraesCS1D01G420900
chr1A
573241469
573244602
3133
False
2120.000000
3661
90.065
1
3227
2
chr1A.!!$F1
3226
3
TraesCS1D01G420900
chr1A
568728813
568730023
1210
True
959.000000
959
81.189
1203
2416
1
chr1A.!!$R1
1213
4
TraesCS1D01G420900
chr1B
664775655
664778696
3041
False
1328.666667
3591
92.035
1
3216
3
chr1B.!!$F2
3215
5
TraesCS1D01G420900
chr1B
659723901
659725111
1210
False
1031.000000
1031
82.248
1203
2416
1
chr1B.!!$F1
1213
6
TraesCS1D01G420900
chr7A
545934338
545935837
1499
False
1273.000000
1273
82.148
1015
2518
1
chr7A.!!$F1
1503
7
TraesCS1D01G420900
chr7B
470835526
470836956
1430
True
1242.000000
1242
82.450
1057
2499
1
chr7B.!!$R1
1442
8
TraesCS1D01G420900
chr7D
451186360
451187790
1430
True
1208.000000
1208
82.037
1057
2499
1
chr7D.!!$R1
1442
9
TraesCS1D01G420900
chr7D
617197737
617198618
881
False
291.000000
291
73.141
1532
2416
1
chr7D.!!$F2
884
10
TraesCS1D01G420900
chr4A
62538720
62539411
691
False
564.000000
564
81.545
1736
2427
1
chr4A.!!$F1
691
AutoCloner calculated primer pairs
These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3),
whilst remaining within the specified product range where possible.
Forward
Primers
Reverse
Primers
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
Orientation
231
238
0.239082
ACAAGATCGTGACGTGCGTA
59.761
50.0
15.90
0.0
0.0
4.42
F
1077
1160
0.320421
TCAAGTACGTGAAGCTGGGC
60.320
55.0
9.17
0.0
0.0
5.36
F
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
Orientation
2218
2307
0.694771
TGCAGGTTGCTCTCCATCTT
59.305
50.0
2.48
0.0
45.31
2.4
R
3021
3138
0.319986
TATGAAGCACACACGCGGAA
60.320
50.0
12.47
0.0
36.85
4.3
R
All possible primers
Listed here are all possible primers based on the multiple sequence alignment and SNPs generated
previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work
during PCR or sequencing,
these could be used as alternatives.
Forward
Primers
Reverse
Primers
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
44
45
7.096065
TGTCAAATATCGCTTGTTATCTGATCG
60.096
37.037
0.00
0.00
0.00
3.69
143
149
0.746659
CAAGGGATGGAAAATCCGGC
59.253
55.000
0.00
0.00
40.17
6.13
144
150
0.631212
AAGGGATGGAAAATCCGGCT
59.369
50.000
0.00
0.00
40.17
5.52
145
151
1.518367
AGGGATGGAAAATCCGGCTA
58.482
50.000
0.00
0.00
40.17
3.93
146
152
1.143073
AGGGATGGAAAATCCGGCTAC
59.857
52.381
0.00
0.00
40.17
3.58
147
153
1.605753
GGATGGAAAATCCGGCTACC
58.394
55.000
0.00
0.00
40.17
3.18
185
192
4.820744
CCCAACCCCCAGCCATCG
62.821
72.222
0.00
0.00
0.00
3.84
205
212
1.082104
GTGGAAAAACTCTGCGCGG
60.082
57.895
10.86
10.86
0.00
6.46
218
225
4.143333
CGCGGTCGGGGACAAGAT
62.143
66.667
0.00
0.00
33.68
2.40
226
233
1.590147
GGGGACAAGATCGTGACGT
59.410
57.895
15.90
0.00
0.00
4.34
227
234
0.736325
GGGGACAAGATCGTGACGTG
60.736
60.000
15.90
0.00
0.00
4.49
228
235
1.352156
GGGACAAGATCGTGACGTGC
61.352
60.000
15.90
0.00
0.00
5.34
229
236
1.674611
GGACAAGATCGTGACGTGCG
61.675
60.000
15.90
0.00
0.00
5.34
230
237
1.002250
GACAAGATCGTGACGTGCGT
61.002
55.000
15.90
0.00
0.00
5.24
231
238
0.239082
ACAAGATCGTGACGTGCGTA
59.761
50.000
15.90
0.00
0.00
4.42
232
239
0.633733
CAAGATCGTGACGTGCGTAC
59.366
55.000
4.40
0.00
0.00
3.67
233
240
0.455633
AAGATCGTGACGTGCGTACC
60.456
55.000
4.40
0.00
0.00
3.34
349
364
4.465512
GACCAGCGGCATTGCACG
62.466
66.667
11.39
12.39
37.31
5.34
567
590
2.064581
GCATCCCGACCCAGGTAGT
61.065
63.158
0.00
0.00
0.00
2.73
568
591
0.757935
GCATCCCGACCCAGGTAGTA
60.758
60.000
0.00
0.00
0.00
1.82
570
593
0.466922
ATCCCGACCCAGGTAGTACG
60.467
60.000
0.00
0.00
0.00
3.67
571
594
1.379044
CCCGACCCAGGTAGTACGT
60.379
63.158
0.00
0.00
0.00
3.57
574
597
0.652592
CGACCCAGGTAGTACGTACG
59.347
60.000
19.49
15.01
31.59
3.67
575
598
1.739067
GACCCAGGTAGTACGTACGT
58.261
55.000
25.98
25.98
31.59
3.57
624
647
4.470170
CCGTCGCGGTCACGATCA
62.470
66.667
18.89
0.00
45.06
2.92
625
648
3.238241
CGTCGCGGTCACGATCAC
61.238
66.667
12.88
0.00
45.06
3.06
626
649
3.238241
GTCGCGGTCACGATCACG
61.238
66.667
6.13
0.00
45.06
4.35
748
780
4.792068
ACCAATCAACTCAAACTCCTTCA
58.208
39.130
0.00
0.00
0.00
3.02
753
790
5.034852
TCAACTCAAACTCCTTCATGTCA
57.965
39.130
0.00
0.00
0.00
3.58
756
793
4.978099
ACTCAAACTCCTTCATGTCATGT
58.022
39.130
12.54
0.00
0.00
3.21
771
808
3.020274
GTCATGTCTCTGCAGGTCTCTA
58.980
50.000
15.13
0.00
0.00
2.43
774
811
1.636003
TGTCTCTGCAGGTCTCTAGGA
59.364
52.381
15.13
0.00
0.00
2.94
805
864
4.157120
CCGGTCGTCCCATCCCAC
62.157
72.222
0.00
0.00
0.00
4.61
853
912
2.983592
CGGCACACTCCAAACCCC
60.984
66.667
0.00
0.00
0.00
4.95
855
914
1.903404
GGCACACTCCAAACCCCAG
60.903
63.158
0.00
0.00
0.00
4.45
1053
1136
2.804090
GACTTCACGCGGTCGGTC
60.804
66.667
12.47
9.83
40.69
4.79
1077
1160
0.320421
TCAAGTACGTGAAGCTGGGC
60.320
55.000
9.17
0.00
0.00
5.36
1167
1250
0.684535
TCTCCACCTTCACGATGCAA
59.315
50.000
0.00
0.00
0.00
4.08
1473
1556
4.021925
GTGCTCAACCTCCCGCCT
62.022
66.667
0.00
0.00
0.00
5.52
2554
2646
2.124983
CATCCAGCGACACCCAGG
60.125
66.667
0.00
0.00
0.00
4.45
2597
2692
1.712350
CGTACGTCTTTTGGTCGAGTG
59.288
52.381
7.22
0.00
0.00
3.51
2598
2693
2.602933
CGTACGTCTTTTGGTCGAGTGA
60.603
50.000
7.22
0.00
0.00
3.41
2599
2694
2.814280
ACGTCTTTTGGTCGAGTGAT
57.186
45.000
0.00
0.00
0.00
3.06
2600
2695
2.673833
ACGTCTTTTGGTCGAGTGATC
58.326
47.619
0.00
0.00
0.00
2.92
2617
2712
2.875317
TGATCGAGTCTGTAGCTAGCAG
59.125
50.000
18.83
5.80
35.43
4.24
2638
2743
2.281761
CGAGCTGCTTGGGGTTGT
60.282
61.111
9.11
0.00
0.00
3.32
2655
2760
3.057806
GGTTGTGGTTGCATTGGTACTAC
60.058
47.826
0.00
0.00
0.00
2.73
2692
2809
4.861196
AGAGTCAGTCAAGCTAGGTATGA
58.139
43.478
0.00
0.00
0.00
2.15
2779
2896
5.359576
TGTTGATCCTCTAGCTCTTCTTCTC
59.640
44.000
0.00
0.00
0.00
2.87
2789
2906
3.119029
AGCTCTTCTTCTCTCATGTGCTC
60.119
47.826
0.00
0.00
0.00
4.26
2793
2910
3.706802
TCTTCTCTCATGTGCTCGATC
57.293
47.619
0.00
0.00
0.00
3.69
2797
2914
3.220940
TCTCTCATGTGCTCGATCTCAT
58.779
45.455
0.00
0.00
0.00
2.90
2798
2915
3.252944
TCTCTCATGTGCTCGATCTCATC
59.747
47.826
1.07
0.00
0.00
2.92
2799
2916
2.954318
TCTCATGTGCTCGATCTCATCA
59.046
45.455
1.07
0.00
0.00
3.07
2800
2917
3.573110
TCTCATGTGCTCGATCTCATCAT
59.427
43.478
1.07
0.00
0.00
2.45
2801
2918
3.650139
TCATGTGCTCGATCTCATCATG
58.350
45.455
1.07
8.72
34.46
3.07
2802
2919
2.521105
TGTGCTCGATCTCATCATGG
57.479
50.000
0.00
0.00
0.00
3.66
2804
2921
2.631545
TGTGCTCGATCTCATCATGGAT
59.368
45.455
0.00
0.00
0.00
3.41
2805
2922
2.994578
GTGCTCGATCTCATCATGGATG
59.005
50.000
0.00
0.00
41.00
3.51
2806
2923
2.895404
TGCTCGATCTCATCATGGATGA
59.105
45.455
8.48
8.48
45.35
2.92
2807
2924
3.322828
TGCTCGATCTCATCATGGATGAA
59.677
43.478
9.89
2.95
46.51
2.57
2808
2925
4.202284
TGCTCGATCTCATCATGGATGAAA
60.202
41.667
9.89
0.00
46.51
2.69
2809
2926
4.152045
GCTCGATCTCATCATGGATGAAAC
59.848
45.833
9.89
4.39
46.51
2.78
2810
2927
5.280654
TCGATCTCATCATGGATGAAACA
57.719
39.130
9.89
0.00
46.51
2.83
2811
2928
5.861727
TCGATCTCATCATGGATGAAACAT
58.138
37.500
9.89
3.38
46.51
2.71
2813
2930
6.870439
TCGATCTCATCATGGATGAAACATAC
59.130
38.462
9.89
0.00
46.51
2.39
2814
2931
6.872547
CGATCTCATCATGGATGAAACATACT
59.127
38.462
9.89
0.00
46.51
2.12
2815
2932
7.063191
CGATCTCATCATGGATGAAACATACTC
59.937
40.741
9.89
0.00
46.51
2.59
2816
2933
6.528321
TCTCATCATGGATGAAACATACTCC
58.472
40.000
9.89
0.00
46.51
3.85
2817
2934
5.624159
TCATCATGGATGAAACATACTCCC
58.376
41.667
6.45
0.00
44.70
4.30
2819
2936
5.296151
TCATGGATGAAACATACTCCCTC
57.704
43.478
0.00
0.00
33.08
4.30
2821
2938
2.434336
TGGATGAAACATACTCCCTCCG
59.566
50.000
0.00
0.00
0.00
4.63
2823
2940
3.492829
GGATGAAACATACTCCCTCCGTC
60.493
52.174
0.00
0.00
0.00
4.79
2825
2942
3.170717
TGAAACATACTCCCTCCGTCTT
58.829
45.455
0.00
0.00
0.00
3.01
2826
2943
3.581332
TGAAACATACTCCCTCCGTCTTT
59.419
43.478
0.00
0.00
0.00
2.52
2827
2944
4.041198
TGAAACATACTCCCTCCGTCTTTT
59.959
41.667
0.00
0.00
0.00
2.27
2828
2945
4.635699
AACATACTCCCTCCGTCTTTTT
57.364
40.909
0.00
0.00
0.00
1.94
2829
2946
3.939066
ACATACTCCCTCCGTCTTTTTG
58.061
45.455
0.00
0.00
0.00
2.44
2830
2947
3.581332
ACATACTCCCTCCGTCTTTTTGA
59.419
43.478
0.00
0.00
0.00
2.69
2831
2948
2.545537
ACTCCCTCCGTCTTTTTGAC
57.454
50.000
0.00
0.00
42.06
3.18
2832
2949
1.766496
ACTCCCTCCGTCTTTTTGACA
59.234
47.619
0.00
0.00
45.60
3.58
2833
2950
2.143925
CTCCCTCCGTCTTTTTGACAC
58.856
52.381
0.00
0.00
45.60
3.67
2834
2951
1.766496
TCCCTCCGTCTTTTTGACACT
59.234
47.619
0.00
0.00
45.60
3.55
2835
2952
1.873591
CCCTCCGTCTTTTTGACACTG
59.126
52.381
0.00
0.00
45.60
3.66
2846
2963
1.492319
TTGACACTGTACGCGGTTGC
61.492
55.000
12.47
0.00
37.91
4.17
2860
2977
2.027926
GCGGTTGCGATTTATTTGCTTG
59.972
45.455
0.00
0.00
35.56
4.01
2862
2979
3.059306
CGGTTGCGATTTATTTGCTTGTG
59.941
43.478
0.00
0.00
35.56
3.33
2863
2980
3.367630
GGTTGCGATTTATTTGCTTGTGG
59.632
43.478
0.00
0.00
35.56
4.17
2864
2981
4.233789
GTTGCGATTTATTTGCTTGTGGA
58.766
39.130
0.00
0.00
35.56
4.02
2865
2982
4.717233
TGCGATTTATTTGCTTGTGGAT
57.283
36.364
0.00
0.00
35.56
3.41
2866
2983
5.070770
TGCGATTTATTTGCTTGTGGATT
57.929
34.783
0.00
0.00
35.56
3.01
2867
2984
5.477510
TGCGATTTATTTGCTTGTGGATTT
58.522
33.333
0.00
0.00
35.56
2.17
2868
2985
5.576384
TGCGATTTATTTGCTTGTGGATTTC
59.424
36.000
0.00
0.00
35.56
2.17
2869
2986
5.807011
GCGATTTATTTGCTTGTGGATTTCT
59.193
36.000
0.00
0.00
0.00
2.52
2870
2987
6.237648
GCGATTTATTTGCTTGTGGATTTCTG
60.238
38.462
0.00
0.00
0.00
3.02
2871
2988
6.237648
CGATTTATTTGCTTGTGGATTTCTGC
60.238
38.462
0.00
0.00
0.00
4.26
2872
2989
2.420628
TTTGCTTGTGGATTTCTGCG
57.579
45.000
0.00
0.00
0.00
5.18
2873
2990
0.597568
TTGCTTGTGGATTTCTGCGG
59.402
50.000
0.00
0.00
0.00
5.69
2874
2991
0.537143
TGCTTGTGGATTTCTGCGGT
60.537
50.000
0.00
0.00
0.00
5.68
2875
2992
0.598065
GCTTGTGGATTTCTGCGGTT
59.402
50.000
0.00
0.00
0.00
4.44
2973
3090
1.411612
GGAATACGATCGGTCCCTGTT
59.588
52.381
20.98
2.01
0.00
3.16
2977
3094
0.037605
ACGATCGGTCCCTGTTTGTC
60.038
55.000
20.98
0.00
0.00
3.18
2993
3110
3.923645
TCTGTCTGGTCCCGGGGT
61.924
66.667
23.50
0.00
0.00
4.95
3031
3148
1.119635
CACAATGTTTTCCGCGTGTG
58.880
50.000
4.92
6.59
0.00
3.82
3069
3186
0.799917
CTGTCGCTCATCCACTCACG
60.800
60.000
0.00
0.00
0.00
4.35
3108
3225
1.890510
CGTATGCCCGCTTAACCCC
60.891
63.158
0.00
0.00
0.00
4.95
3110
3227
3.760700
TATGCCCGCTTAACCCCGC
62.761
63.158
0.00
0.00
0.00
6.13
3172
3289
3.339539
TTCCATGCATGCGGTTGCG
62.340
57.895
21.69
5.85
45.77
4.85
3223
3341
7.538678
CAGAAACGGATGAACTAAATCAAAAGG
59.461
37.037
0.00
0.00
32.06
3.11
3227
3345
6.151144
ACGGATGAACTAAATCAAAAGGAAGG
59.849
38.462
0.00
0.00
32.06
3.46
3228
3346
6.374333
CGGATGAACTAAATCAAAAGGAAGGA
59.626
38.462
0.00
0.00
32.06
3.36
3229
3347
7.539436
GGATGAACTAAATCAAAAGGAAGGAC
58.461
38.462
0.00
0.00
32.06
3.85
3230
3348
7.176690
GGATGAACTAAATCAAAAGGAAGGACA
59.823
37.037
0.00
0.00
32.06
4.02
3231
3349
8.655935
ATGAACTAAATCAAAAGGAAGGACAT
57.344
30.769
0.00
0.00
32.06
3.06
3232
3350
8.110860
TGAACTAAATCAAAAGGAAGGACATC
57.889
34.615
0.00
0.00
0.00
3.06
3233
3351
7.944554
TGAACTAAATCAAAAGGAAGGACATCT
59.055
33.333
0.00
0.00
0.00
2.90
3234
3352
7.929941
ACTAAATCAAAAGGAAGGACATCTC
57.070
36.000
0.00
0.00
0.00
2.75
3235
3353
6.887002
ACTAAATCAAAAGGAAGGACATCTCC
59.113
38.462
0.00
0.00
36.71
3.71
3236
3354
3.721087
TCAAAAGGAAGGACATCTCCC
57.279
47.619
0.00
0.00
37.25
4.30
3237
3355
3.260205
TCAAAAGGAAGGACATCTCCCT
58.740
45.455
0.00
0.00
37.25
4.20
3238
3356
3.657727
TCAAAAGGAAGGACATCTCCCTT
59.342
43.478
0.00
0.00
46.03
3.95
3242
3360
3.029083
AAGGACATCTCCCTTCCCC
57.971
57.895
0.00
0.00
39.72
4.81
3243
3361
0.423544
AAGGACATCTCCCTTCCCCT
59.576
55.000
0.00
0.00
39.72
4.79
3244
3362
0.030603
AGGACATCTCCCTTCCCCTC
60.031
60.000
0.00
0.00
37.25
4.30
3245
3363
0.030603
GGACATCTCCCTTCCCCTCT
60.031
60.000
0.00
0.00
0.00
3.69
3246
3364
1.419381
GACATCTCCCTTCCCCTCTC
58.581
60.000
0.00
0.00
0.00
3.20
3247
3365
0.719015
ACATCTCCCTTCCCCTCTCA
59.281
55.000
0.00
0.00
0.00
3.27
3248
3366
1.127343
CATCTCCCTTCCCCTCTCAC
58.873
60.000
0.00
0.00
0.00
3.51
3249
3367
1.022903
ATCTCCCTTCCCCTCTCACT
58.977
55.000
0.00
0.00
0.00
3.41
3250
3368
1.695065
TCTCCCTTCCCCTCTCACTA
58.305
55.000
0.00
0.00
0.00
2.74
3251
3369
2.008400
TCTCCCTTCCCCTCTCACTAA
58.992
52.381
0.00
0.00
0.00
2.24
3252
3370
2.385765
TCTCCCTTCCCCTCTCACTAAA
59.614
50.000
0.00
0.00
0.00
1.85
3253
3371
2.502130
CTCCCTTCCCCTCTCACTAAAC
59.498
54.545
0.00
0.00
0.00
2.01
3254
3372
2.113777
TCCCTTCCCCTCTCACTAAACT
59.886
50.000
0.00
0.00
0.00
2.66
3255
3373
2.237392
CCCTTCCCCTCTCACTAAACTG
59.763
54.545
0.00
0.00
0.00
3.16
3256
3374
3.173965
CCTTCCCCTCTCACTAAACTGA
58.826
50.000
0.00
0.00
0.00
3.41
3257
3375
3.055747
CCTTCCCCTCTCACTAAACTGAC
60.056
52.174
0.00
0.00
0.00
3.51
3258
3376
2.168496
TCCCCTCTCACTAAACTGACG
58.832
52.381
0.00
0.00
0.00
4.35
3259
3377
1.204941
CCCCTCTCACTAAACTGACGG
59.795
57.143
0.00
0.00
0.00
4.79
3260
3378
1.404315
CCCTCTCACTAAACTGACGGC
60.404
57.143
0.00
0.00
0.00
5.68
3261
3379
1.546476
CCTCTCACTAAACTGACGGCT
59.454
52.381
0.00
0.00
0.00
5.52
3262
3380
2.753452
CCTCTCACTAAACTGACGGCTA
59.247
50.000
0.00
0.00
0.00
3.93
3263
3381
3.181495
CCTCTCACTAAACTGACGGCTAG
60.181
52.174
0.00
0.00
0.00
3.42
3264
3382
2.753452
TCTCACTAAACTGACGGCTAGG
59.247
50.000
0.00
0.00
0.00
3.02
3265
3383
1.203994
TCACTAAACTGACGGCTAGGC
59.796
52.381
6.15
6.15
0.00
3.93
3266
3384
0.535797
ACTAAACTGACGGCTAGGCC
59.464
55.000
11.22
0.00
46.75
5.19
3277
3395
3.052181
GCTAGGCCAAGAACTCGTC
57.948
57.895
5.01
0.00
0.00
4.20
3278
3396
0.460459
GCTAGGCCAAGAACTCGTCC
60.460
60.000
5.01
0.00
0.00
4.79
3279
3397
1.187087
CTAGGCCAAGAACTCGTCCT
58.813
55.000
5.01
0.00
0.00
3.85
3280
3398
1.135333
CTAGGCCAAGAACTCGTCCTC
59.865
57.143
5.01
0.00
0.00
3.71
3281
3399
0.543174
AGGCCAAGAACTCGTCCTCT
60.543
55.000
5.01
0.00
0.00
3.69
3282
3400
0.321996
GGCCAAGAACTCGTCCTCTT
59.678
55.000
0.00
0.00
31.99
2.85
3283
3401
1.673329
GGCCAAGAACTCGTCCTCTTC
60.673
57.143
0.00
0.00
29.29
2.87
3284
3402
1.000955
GCCAAGAACTCGTCCTCTTCA
59.999
52.381
0.00
0.00
29.29
3.02
3285
3403
2.548067
GCCAAGAACTCGTCCTCTTCAA
60.548
50.000
0.00
0.00
29.29
2.69
3286
3404
3.321497
CCAAGAACTCGTCCTCTTCAAG
58.679
50.000
0.00
0.00
29.29
3.02
3287
3405
2.734079
CAAGAACTCGTCCTCTTCAAGC
59.266
50.000
0.00
0.00
29.29
4.01
3288
3406
2.243810
AGAACTCGTCCTCTTCAAGCT
58.756
47.619
0.00
0.00
0.00
3.74
3289
3407
2.230266
AGAACTCGTCCTCTTCAAGCTC
59.770
50.000
0.00
0.00
0.00
4.09
3290
3408
0.892063
ACTCGTCCTCTTCAAGCTCC
59.108
55.000
0.00
0.00
0.00
4.70
3291
3409
0.891373
CTCGTCCTCTTCAAGCTCCA
59.109
55.000
0.00
0.00
0.00
3.86
3292
3410
1.480137
CTCGTCCTCTTCAAGCTCCAT
59.520
52.381
0.00
0.00
0.00
3.41
3293
3411
1.478510
TCGTCCTCTTCAAGCTCCATC
59.521
52.381
0.00
0.00
0.00
3.51
3294
3412
1.800655
CGTCCTCTTCAAGCTCCATCG
60.801
57.143
0.00
0.00
0.00
3.84
3295
3413
1.205893
GTCCTCTTCAAGCTCCATCGT
59.794
52.381
0.00
0.00
0.00
3.73
3296
3414
1.902508
TCCTCTTCAAGCTCCATCGTT
59.097
47.619
0.00
0.00
0.00
3.85
3297
3415
2.005451
CCTCTTCAAGCTCCATCGTTG
58.995
52.381
0.00
0.00
0.00
4.10
3298
3416
2.354103
CCTCTTCAAGCTCCATCGTTGA
60.354
50.000
0.00
0.00
0.00
3.18
3299
3417
2.928757
CTCTTCAAGCTCCATCGTTGAG
59.071
50.000
0.00
0.00
32.00
3.02
3305
3423
2.699073
CTCCATCGTTGAGCCCATG
58.301
57.895
0.00
0.00
0.00
3.66
3306
3424
0.816825
CTCCATCGTTGAGCCCATGG
60.817
60.000
4.14
4.14
37.70
3.66
3307
3425
1.224315
CCATCGTTGAGCCCATGGA
59.776
57.895
15.22
0.00
38.52
3.41
3308
3426
0.179009
CCATCGTTGAGCCCATGGAT
60.179
55.000
15.22
0.05
38.52
3.41
3309
3427
1.683943
CATCGTTGAGCCCATGGATT
58.316
50.000
15.22
0.00
0.00
3.01
3310
3428
1.335810
CATCGTTGAGCCCATGGATTG
59.664
52.381
15.22
0.00
0.00
2.67
3311
3429
0.327924
TCGTTGAGCCCATGGATTGT
59.672
50.000
15.22
0.00
0.00
2.71
3312
3430
0.734889
CGTTGAGCCCATGGATTGTC
59.265
55.000
15.22
4.49
0.00
3.18
3313
3431
1.679944
CGTTGAGCCCATGGATTGTCT
60.680
52.381
15.22
1.59
0.00
3.41
3314
3432
2.450476
GTTGAGCCCATGGATTGTCTT
58.550
47.619
15.22
0.00
0.00
3.01
3315
3433
2.827921
GTTGAGCCCATGGATTGTCTTT
59.172
45.455
15.22
0.00
0.00
2.52
3316
3434
2.726821
TGAGCCCATGGATTGTCTTTC
58.273
47.619
15.22
0.00
0.00
2.62
3317
3435
2.027385
GAGCCCATGGATTGTCTTTCC
58.973
52.381
15.22
0.00
0.00
3.13
3318
3436
1.642762
AGCCCATGGATTGTCTTTCCT
59.357
47.619
15.22
0.00
34.17
3.36
3319
3437
2.027385
GCCCATGGATTGTCTTTCCTC
58.973
52.381
15.22
0.00
34.17
3.71
3320
3438
2.357569
GCCCATGGATTGTCTTTCCTCT
60.358
50.000
15.22
0.00
34.17
3.69
3321
3439
3.285484
CCCATGGATTGTCTTTCCTCTG
58.715
50.000
15.22
0.00
34.17
3.35
3322
3440
2.686915
CCATGGATTGTCTTTCCTCTGC
59.313
50.000
5.56
0.00
34.17
4.26
3323
3441
2.496899
TGGATTGTCTTTCCTCTGCC
57.503
50.000
0.00
0.00
34.17
4.85
3324
3442
1.988107
TGGATTGTCTTTCCTCTGCCT
59.012
47.619
0.00
0.00
34.17
4.75
3325
3443
2.290514
TGGATTGTCTTTCCTCTGCCTG
60.291
50.000
0.00
0.00
34.17
4.85
3326
3444
1.742268
GATTGTCTTTCCTCTGCCTGC
59.258
52.381
0.00
0.00
0.00
4.85
3327
3445
0.250901
TTGTCTTTCCTCTGCCTGCC
60.251
55.000
0.00
0.00
0.00
4.85
3328
3446
1.743252
GTCTTTCCTCTGCCTGCCG
60.743
63.158
0.00
0.00
0.00
5.69
3329
3447
3.130160
CTTTCCTCTGCCTGCCGC
61.130
66.667
0.00
0.00
38.31
6.53
3330
3448
3.618780
CTTTCCTCTGCCTGCCGCT
62.619
63.158
0.00
0.00
38.78
5.52
3331
3449
3.196207
TTTCCTCTGCCTGCCGCTT
62.196
57.895
0.00
0.00
38.78
4.68
3332
3450
3.612247
TTCCTCTGCCTGCCGCTTC
62.612
63.158
0.00
0.00
38.78
3.86
3351
3469
4.436998
GTGACCGGTGGCGAGGAG
62.437
72.222
14.63
0.00
0.00
3.69
3356
3474
3.068691
CGGTGGCGAGGAGGAGAA
61.069
66.667
0.00
0.00
0.00
2.87
3357
3475
2.427245
CGGTGGCGAGGAGGAGAAT
61.427
63.158
0.00
0.00
0.00
2.40
3358
3476
1.443828
GGTGGCGAGGAGGAGAATC
59.556
63.158
0.00
0.00
0.00
2.52
3369
3487
4.719997
GAGAATCCTGACGCCTCG
57.280
61.111
0.00
0.00
0.00
4.63
3370
3488
2.107705
GAGAATCCTGACGCCTCGA
58.892
57.895
0.00
0.00
0.00
4.04
3371
3489
0.248702
GAGAATCCTGACGCCTCGAC
60.249
60.000
0.00
0.00
0.00
4.20
3372
3490
0.681564
AGAATCCTGACGCCTCGACT
60.682
55.000
0.00
0.00
0.00
4.18
3373
3491
0.173708
GAATCCTGACGCCTCGACTT
59.826
55.000
0.00
0.00
0.00
3.01
3374
3492
0.173708
AATCCTGACGCCTCGACTTC
59.826
55.000
0.00
0.00
0.00
3.01
3375
3493
1.994507
ATCCTGACGCCTCGACTTCG
61.995
60.000
0.00
0.00
41.45
3.79
3377
3495
1.512310
CTGACGCCTCGACTTCGAC
60.512
63.158
0.00
0.00
44.22
4.20
3378
3496
1.913451
CTGACGCCTCGACTTCGACT
61.913
60.000
0.00
0.00
44.22
4.18
3379
3497
0.671472
TGACGCCTCGACTTCGACTA
60.671
55.000
0.00
0.00
44.22
2.59
3380
3498
0.026544
GACGCCTCGACTTCGACTAG
59.973
60.000
0.00
0.00
44.22
2.57
3381
3499
0.673022
ACGCCTCGACTTCGACTAGT
60.673
55.000
0.00
0.00
44.22
2.57
3382
3500
1.284657
CGCCTCGACTTCGACTAGTA
58.715
55.000
0.00
0.00
44.22
1.82
3383
3501
1.258458
CGCCTCGACTTCGACTAGTAG
59.742
57.143
0.00
0.00
44.22
2.57
3384
3502
2.278854
GCCTCGACTTCGACTAGTAGT
58.721
52.381
1.37
1.37
44.22
2.73
3385
3503
2.677337
GCCTCGACTTCGACTAGTAGTT
59.323
50.000
3.85
0.00
44.22
2.24
3386
3504
3.126686
GCCTCGACTTCGACTAGTAGTTT
59.873
47.826
3.85
0.00
44.22
2.66
3387
3505
4.331168
GCCTCGACTTCGACTAGTAGTTTA
59.669
45.833
3.85
0.00
44.22
2.01
3388
3506
5.502220
GCCTCGACTTCGACTAGTAGTTTAG
60.502
48.000
3.85
5.19
44.22
1.85
3389
3507
5.006552
CCTCGACTTCGACTAGTAGTTTAGG
59.993
48.000
3.85
3.75
44.22
2.69
3390
3508
5.482908
TCGACTTCGACTAGTAGTTTAGGT
58.517
41.667
3.85
2.55
44.22
3.08
3391
3509
6.631016
TCGACTTCGACTAGTAGTTTAGGTA
58.369
40.000
3.85
0.00
44.22
3.08
3392
3510
7.097192
TCGACTTCGACTAGTAGTTTAGGTAA
58.903
38.462
3.85
0.00
44.22
2.85
3393
3511
7.766278
TCGACTTCGACTAGTAGTTTAGGTAAT
59.234
37.037
3.85
0.00
44.22
1.89
3394
3512
8.394121
CGACTTCGACTAGTAGTTTAGGTAATT
58.606
37.037
3.85
0.00
43.02
1.40
3419
3537
1.609208
TTTCAAGTCCTTGCAGAGGC
58.391
50.000
9.35
5.93
45.87
4.70
3420
3538
0.603707
TTCAAGTCCTTGCAGAGGCG
60.604
55.000
9.35
0.00
45.87
5.52
3421
3539
2.037136
CAAGTCCTTGCAGAGGCGG
61.037
63.158
9.35
0.00
45.87
6.13
3422
3540
3.259633
AAGTCCTTGCAGAGGCGGG
62.260
63.158
9.35
0.00
45.87
6.13
3423
3541
4.785453
GTCCTTGCAGAGGCGGGG
62.785
72.222
9.35
0.00
45.87
5.73
3426
3544
4.729918
CTTGCAGAGGCGGGGCTT
62.730
66.667
0.00
0.00
45.35
4.35
3447
3565
2.813474
CGGATGGTCGCGCTTCAA
60.813
61.111
5.56
0.00
0.00
2.69
3448
3566
2.785258
GGATGGTCGCGCTTCAAC
59.215
61.111
5.56
0.00
0.00
3.18
3449
3567
2.032634
GGATGGTCGCGCTTCAACA
61.033
57.895
5.56
0.00
0.00
3.33
3450
3568
1.369091
GGATGGTCGCGCTTCAACAT
61.369
55.000
5.56
3.11
0.00
2.71
3451
3569
0.026803
GATGGTCGCGCTTCAACATC
59.973
55.000
5.56
9.44
0.00
3.06
3452
3570
1.695893
ATGGTCGCGCTTCAACATCG
61.696
55.000
5.56
0.00
0.00
3.84
3453
3571
2.092291
GGTCGCGCTTCAACATCGA
61.092
57.895
5.56
0.00
0.00
3.59
3454
3572
1.057361
GTCGCGCTTCAACATCGAC
59.943
57.895
5.56
0.00
41.80
4.20
3455
3573
1.080772
TCGCGCTTCAACATCGACT
60.081
52.632
5.56
0.00
0.00
4.18
3456
3574
0.666274
TCGCGCTTCAACATCGACTT
60.666
50.000
5.56
0.00
0.00
3.01
3457
3575
0.163788
CGCGCTTCAACATCGACTTT
59.836
50.000
5.56
0.00
0.00
2.66
3458
3576
1.398451
CGCGCTTCAACATCGACTTTT
60.398
47.619
5.56
0.00
0.00
2.27
3459
3577
2.650608
GCGCTTCAACATCGACTTTTT
58.349
42.857
0.00
0.00
0.00
1.94
3460
3578
2.652172
GCGCTTCAACATCGACTTTTTC
59.348
45.455
0.00
0.00
0.00
2.29
3461
3579
3.607078
GCGCTTCAACATCGACTTTTTCT
60.607
43.478
0.00
0.00
0.00
2.52
3462
3580
4.377022
GCGCTTCAACATCGACTTTTTCTA
60.377
41.667
0.00
0.00
0.00
2.10
3463
3581
5.073478
CGCTTCAACATCGACTTTTTCTAC
58.927
41.667
0.00
0.00
0.00
2.59
3464
3582
5.333035
CGCTTCAACATCGACTTTTTCTACA
60.333
40.000
0.00
0.00
0.00
2.74
3465
3583
6.427150
GCTTCAACATCGACTTTTTCTACAA
58.573
36.000
0.00
0.00
0.00
2.41
3466
3584
6.357240
GCTTCAACATCGACTTTTTCTACAAC
59.643
38.462
0.00
0.00
0.00
3.32
3467
3585
6.912203
TCAACATCGACTTTTTCTACAACA
57.088
33.333
0.00
0.00
0.00
3.33
3468
3586
7.310072
TCAACATCGACTTTTTCTACAACAA
57.690
32.000
0.00
0.00
0.00
2.83
3469
3587
7.184106
TCAACATCGACTTTTTCTACAACAAC
58.816
34.615
0.00
0.00
0.00
3.32
3470
3588
5.734311
ACATCGACTTTTTCTACAACAACG
58.266
37.500
0.00
0.00
0.00
4.10
3471
3589
5.292589
ACATCGACTTTTTCTACAACAACGT
59.707
36.000
0.00
0.00
0.00
3.99
3472
3590
5.379757
TCGACTTTTTCTACAACAACGTC
57.620
39.130
0.00
0.00
0.00
4.34
3473
3591
5.104374
TCGACTTTTTCTACAACAACGTCT
58.896
37.500
0.00
0.00
0.00
4.18
3474
3592
5.230726
TCGACTTTTTCTACAACAACGTCTC
59.769
40.000
0.00
0.00
0.00
3.36
3475
3593
5.231568
CGACTTTTTCTACAACAACGTCTCT
59.768
40.000
0.00
0.00
0.00
3.10
3476
3594
6.415867
CGACTTTTTCTACAACAACGTCTCTA
59.584
38.462
0.00
0.00
0.00
2.43
3477
3595
7.460751
ACTTTTTCTACAACAACGTCTCTAC
57.539
36.000
0.00
0.00
0.00
2.59
3493
3611
6.551812
GTCTCTACGAAAGAATAAACGTCC
57.448
41.667
0.00
0.00
39.59
4.79
3494
3612
6.320944
GTCTCTACGAAAGAATAAACGTCCT
58.679
40.000
0.00
0.00
39.59
3.85
3495
3613
6.468637
GTCTCTACGAAAGAATAAACGTCCTC
59.531
42.308
0.00
0.00
39.59
3.71
3496
3614
6.149973
TCTCTACGAAAGAATAAACGTCCTCA
59.850
38.462
0.00
0.00
39.59
3.86
3497
3615
6.088824
TCTACGAAAGAATAAACGTCCTCAC
58.911
40.000
0.00
0.00
39.59
3.51
3498
3616
8.811083
CTCTACGAAAGAATAAACGTCCTCACG
61.811
44.444
0.00
0.00
42.26
4.35
3506
3624
4.361827
CGTCCTCACGTCATCGAC
57.638
61.111
0.00
0.00
41.42
4.20
3515
3633
2.202932
GTCATCGACGCCATGCCT
60.203
61.111
0.00
0.00
0.00
4.75
3516
3634
2.202919
TCATCGACGCCATGCCTG
60.203
61.111
0.00
0.00
0.00
4.85
3517
3635
3.274586
CATCGACGCCATGCCTGG
61.275
66.667
3.22
3.22
46.17
4.45
3518
3636
3.469970
ATCGACGCCATGCCTGGA
61.470
61.111
12.80
0.00
46.37
3.86
3519
3637
3.740128
ATCGACGCCATGCCTGGAC
62.740
63.158
12.80
2.46
46.37
4.02
3523
3641
4.776322
CGCCATGCCTGGACGGAA
62.776
66.667
12.80
0.00
46.37
4.30
3524
3642
2.124151
GCCATGCCTGGACGGAAT
60.124
61.111
12.80
0.00
46.37
3.01
3526
3644
3.831883
CATGCCTGGACGGAATGG
58.168
61.111
0.00
0.00
44.18
3.16
3527
3645
2.124151
ATGCCTGGACGGAATGGC
60.124
61.111
0.00
0.00
45.10
4.40
3528
3646
3.721370
ATGCCTGGACGGAATGGCC
62.721
63.158
0.00
0.00
44.32
5.36
3529
3647
4.115199
GCCTGGACGGAATGGCCT
62.115
66.667
3.32
0.00
39.49
5.19
3530
3648
2.124570
CCTGGACGGAATGGCCTG
60.125
66.667
3.32
0.00
33.16
4.85
3531
3649
2.124570
CTGGACGGAATGGCCTGG
60.125
66.667
3.32
0.00
0.00
4.45
3532
3650
2.609299
TGGACGGAATGGCCTGGA
60.609
61.111
3.32
0.00
0.00
3.86
3533
3651
2.124695
GGACGGAATGGCCTGGAC
60.125
66.667
3.32
0.00
0.00
4.02
3534
3652
2.668632
GACGGAATGGCCTGGACA
59.331
61.111
3.79
3.79
0.00
4.02
3535
3653
1.002624
GACGGAATGGCCTGGACAA
60.003
57.895
6.20
0.00
0.00
3.18
3536
3654
0.608035
GACGGAATGGCCTGGACAAA
60.608
55.000
6.20
0.00
0.00
2.83
3537
3655
0.609131
ACGGAATGGCCTGGACAAAG
60.609
55.000
6.20
0.37
0.00
2.77
3538
3656
0.322456
CGGAATGGCCTGGACAAAGA
60.322
55.000
6.20
0.00
0.00
2.52
3539
3657
1.683011
CGGAATGGCCTGGACAAAGAT
60.683
52.381
6.20
0.00
0.00
2.40
3540
3658
2.460669
GGAATGGCCTGGACAAAGATT
58.539
47.619
6.20
0.00
0.00
2.40
3541
3659
2.833943
GGAATGGCCTGGACAAAGATTT
59.166
45.455
6.20
0.00
0.00
2.17
3542
3660
3.261643
GGAATGGCCTGGACAAAGATTTT
59.738
43.478
6.20
0.00
0.00
1.82
3543
3661
4.498241
GAATGGCCTGGACAAAGATTTTC
58.502
43.478
6.20
0.07
0.00
2.29
3544
3662
2.956132
TGGCCTGGACAAAGATTTTCA
58.044
42.857
0.00
0.00
0.00
2.69
3545
3663
3.509442
TGGCCTGGACAAAGATTTTCAT
58.491
40.909
0.00
0.00
0.00
2.57
3546
3664
3.511146
TGGCCTGGACAAAGATTTTCATC
59.489
43.478
0.00
0.00
0.00
2.92
3547
3665
3.766051
GGCCTGGACAAAGATTTTCATCT
59.234
43.478
0.00
0.00
42.05
2.90
3557
3675
4.301072
AGATTTTCATCTTGGTTCCGGA
57.699
40.909
0.00
0.00
36.18
5.14
3558
3676
4.265073
AGATTTTCATCTTGGTTCCGGAG
58.735
43.478
3.34
0.00
36.18
4.63
3559
3677
3.780804
TTTTCATCTTGGTTCCGGAGA
57.219
42.857
3.34
0.00
0.00
3.71
Position
MSA Position
Penalty
Sequence
TM
GC
Self any TH
Self end TH
Hairpin
End Stability
44
45
3.920412
GTGAAAAACCTGGATGATTTCGC
59.080
43.478
0.00
8.12
34.58
4.70
98
104
2.100631
CGAACCTGCATGGACGGAC
61.101
63.158
8.91
3.47
39.71
4.79
104
110
2.401766
GCTGACCGAACCTGCATGG
61.402
63.158
0.00
0.00
42.93
3.66
147
153
4.073200
GTGGGGTGTCCGGTACCG
62.073
72.222
27.68
27.68
39.14
4.02
148
154
3.709633
GGTGGGGTGTCCGGTACC
61.710
72.222
18.51
18.51
38.76
3.34
182
189
0.517316
GCAGAGTTTTTCCACGCGAT
59.483
50.000
15.93
0.00
0.00
4.58
185
192
1.725973
GCGCAGAGTTTTTCCACGC
60.726
57.895
0.30
0.00
41.44
5.34
205
212
0.458025
GTCACGATCTTGTCCCCGAC
60.458
60.000
0.00
0.00
0.00
4.79
218
225
2.253154
CAGGTACGCACGTCACGA
59.747
61.111
2.91
0.00
0.00
4.35
416
435
2.815211
CGGCATGGTGACCACGAG
60.815
66.667
6.40
0.64
35.80
4.18
594
617
2.029964
GACGGGCACGAGGAAACA
59.970
61.111
19.19
0.00
44.60
2.83
748
780
2.168106
GAGACCTGCAGAGACATGACAT
59.832
50.000
17.39
0.00
0.00
3.06
753
790
2.243478
TCCTAGAGACCTGCAGAGACAT
59.757
50.000
17.39
0.26
0.00
3.06
756
793
3.295093
CAATCCTAGAGACCTGCAGAGA
58.705
50.000
17.39
0.00
0.00
3.10
805
864
4.515404
GCCGCGGGCTTATATAGG
57.485
61.111
29.38
0.00
46.69
2.57
853
912
2.747855
GGTTTCGCTCTGGGGCTG
60.748
66.667
0.00
0.00
0.00
4.85
928
1002
1.815421
CGCAAAGATCGTCTGGGGG
60.815
63.158
0.00
0.00
0.00
5.40
929
1003
0.673644
AACGCAAAGATCGTCTGGGG
60.674
55.000
11.51
3.29
39.48
4.96
930
1004
0.443869
CAACGCAAAGATCGTCTGGG
59.556
55.000
7.08
7.08
39.48
4.45
931
1005
0.179215
GCAACGCAAAGATCGTCTGG
60.179
55.000
0.00
0.00
39.48
3.86
932
1006
0.179215
GGCAACGCAAAGATCGTCTG
60.179
55.000
0.00
0.00
39.48
3.51
933
1007
0.602638
TGGCAACGCAAAGATCGTCT
60.603
50.000
0.00
0.00
39.48
4.18
1053
1136
2.156504
CAGCTTCACGTACTTGAGCTTG
59.843
50.000
17.53
12.16
31.61
4.01
1077
1160
1.749063
TGCGTGATCAGGTAGTGGTAG
59.251
52.381
16.27
0.00
0.00
3.18
1167
1250
2.681778
CAGAGGTCGGCCAGGTCT
60.682
66.667
9.71
0.00
37.19
3.85
1473
1556
1.694856
GTTGGCCATGGAGGGGTTA
59.305
57.895
18.40
0.00
38.09
2.85
1500
1583
2.364842
ATGACCAGCTCGGCCTCT
60.365
61.111
0.00
0.00
39.03
3.69
2218
2307
0.694771
TGCAGGTTGCTCTCCATCTT
59.305
50.000
2.48
0.00
45.31
2.40
2554
2646
2.103263
ACGTGGCTCTGGATCCTTATTC
59.897
50.000
14.23
0.80
0.00
1.75
2597
2692
2.875933
ACTGCTAGCTACAGACTCGATC
59.124
50.000
22.25
0.00
38.55
3.69
2598
2693
2.925724
ACTGCTAGCTACAGACTCGAT
58.074
47.619
22.25
4.21
38.55
3.59
2599
2694
2.404923
ACTGCTAGCTACAGACTCGA
57.595
50.000
22.25
0.00
38.55
4.04
2600
2695
2.032377
GCTACTGCTAGCTACAGACTCG
60.032
54.545
22.25
12.11
42.11
4.18
2633
2738
1.960689
AGTACCAATGCAACCACAACC
59.039
47.619
0.00
0.00
0.00
3.77
2634
2739
3.818773
AGTAGTACCAATGCAACCACAAC
59.181
43.478
0.00
0.00
0.00
3.32
2638
2743
5.396324
CCAGATAGTAGTACCAATGCAACCA
60.396
44.000
0.00
0.00
0.00
3.67
2655
2760
5.373222
ACTGACTCTACTGCTACCAGATAG
58.627
45.833
0.00
0.00
41.77
2.08
2692
2809
6.634889
ATGGCAAACCCCAACTAAATTAAT
57.365
33.333
0.00
0.00
38.61
1.40
2779
2896
3.366440
TGATGAGATCGAGCACATGAG
57.634
47.619
18.22
0.00
0.00
2.90
2797
2914
4.103153
GGAGGGAGTATGTTTCATCCATGA
59.897
45.833
0.00
0.00
33.24
3.07
2798
2915
4.392940
GGAGGGAGTATGTTTCATCCATG
58.607
47.826
0.00
0.00
33.24
3.66
2799
2916
3.071602
CGGAGGGAGTATGTTTCATCCAT
59.928
47.826
0.00
0.00
33.24
3.41
2800
2917
2.434336
CGGAGGGAGTATGTTTCATCCA
59.566
50.000
0.00
0.00
33.24
3.41
2801
2918
2.434702
ACGGAGGGAGTATGTTTCATCC
59.565
50.000
0.00
0.00
0.00
3.51
2802
2919
3.385111
AGACGGAGGGAGTATGTTTCATC
59.615
47.826
0.00
0.00
0.00
2.92
2804
2921
2.816411
AGACGGAGGGAGTATGTTTCA
58.184
47.619
0.00
0.00
0.00
2.69
2805
2922
3.889520
AAGACGGAGGGAGTATGTTTC
57.110
47.619
0.00
0.00
0.00
2.78
2806
2923
4.635699
AAAAGACGGAGGGAGTATGTTT
57.364
40.909
0.00
0.00
0.00
2.83
2807
2924
4.041198
TCAAAAAGACGGAGGGAGTATGTT
59.959
41.667
0.00
0.00
0.00
2.71
2808
2925
3.581332
TCAAAAAGACGGAGGGAGTATGT
59.419
43.478
0.00
0.00
0.00
2.29
2809
2926
3.933332
GTCAAAAAGACGGAGGGAGTATG
59.067
47.826
0.00
0.00
37.53
2.39
2810
2927
4.203654
GTCAAAAAGACGGAGGGAGTAT
57.796
45.455
0.00
0.00
37.53
2.12
2811
2928
3.672767
GTCAAAAAGACGGAGGGAGTA
57.327
47.619
0.00
0.00
37.53
2.59
2823
2940
1.595794
ACCGCGTACAGTGTCAAAAAG
59.404
47.619
4.92
0.00
0.00
2.27
2825
2942
1.328069
CAACCGCGTACAGTGTCAAAA
59.672
47.619
4.92
0.00
0.00
2.44
2826
2943
0.931702
CAACCGCGTACAGTGTCAAA
59.068
50.000
4.92
0.00
0.00
2.69
2827
2944
1.492319
GCAACCGCGTACAGTGTCAA
61.492
55.000
4.92
0.00
0.00
3.18
2828
2945
1.952133
GCAACCGCGTACAGTGTCA
60.952
57.895
4.92
0.00
0.00
3.58
2829
2946
2.851104
GCAACCGCGTACAGTGTC
59.149
61.111
4.92
0.00
0.00
3.67
2846
2963
6.237648
GCAGAAATCCACAAGCAAATAAATCG
60.238
38.462
0.00
0.00
0.00
3.34
2852
2969
2.353011
CCGCAGAAATCCACAAGCAAAT
60.353
45.455
0.00
0.00
0.00
2.32
2854
2971
0.597568
CCGCAGAAATCCACAAGCAA
59.402
50.000
0.00
0.00
0.00
3.91
2855
2972
0.537143
ACCGCAGAAATCCACAAGCA
60.537
50.000
0.00
0.00
0.00
3.91
2857
2974
2.159707
CGTAACCGCAGAAATCCACAAG
60.160
50.000
0.00
0.00
0.00
3.16
2860
2977
1.435577
ACGTAACCGCAGAAATCCAC
58.564
50.000
0.00
0.00
37.70
4.02
2862
2979
3.181517
GGTTTACGTAACCGCAGAAATCC
60.182
47.826
7.70
0.00
46.48
3.01
2863
2980
3.994789
GGTTTACGTAACCGCAGAAATC
58.005
45.455
7.70
0.00
46.48
2.17
2873
2990
3.423206
CGTCTCAGTGTGGTTTACGTAAC
59.577
47.826
7.70
3.57
35.94
2.50
2874
2991
3.066621
ACGTCTCAGTGTGGTTTACGTAA
59.933
43.478
3.29
3.29
39.98
3.18
2875
2992
2.618241
ACGTCTCAGTGTGGTTTACGTA
59.382
45.455
7.70
0.00
39.98
3.57
2888
3005
2.719556
CGTAAACACAGTCACGTCTCAG
59.280
50.000
0.00
0.00
0.00
3.35
2954
3071
2.864343
CAAACAGGGACCGATCGTATTC
59.136
50.000
15.09
7.19
0.00
1.75
2973
3090
2.214216
CCCGGGACCAGACAGACAA
61.214
63.158
18.48
0.00
0.00
3.18
2977
3094
3.391382
GACCCCGGGACCAGACAG
61.391
72.222
26.32
4.48
0.00
3.51
3021
3138
0.319986
TATGAAGCACACACGCGGAA
60.320
50.000
12.47
0.00
36.85
4.30
3031
3148
1.667724
AGCATCGCAAGTATGAAGCAC
59.332
47.619
0.00
0.00
39.48
4.40
3069
3186
3.704231
ATGTGCATGGACGGAGGGC
62.704
63.158
13.03
0.00
0.00
5.19
3108
3225
5.639506
TCTTTAGATCAAGAACTTTCAGGCG
59.360
40.000
0.00
0.00
29.41
5.52
3172
3289
2.256117
ACAGTCAACAGTTAGGCACC
57.744
50.000
0.00
0.00
0.00
5.01
3227
3345
1.343478
TGAGAGGGGAAGGGAGATGTC
60.343
57.143
0.00
0.00
0.00
3.06
3228
3346
0.719015
TGAGAGGGGAAGGGAGATGT
59.281
55.000
0.00
0.00
0.00
3.06
3229
3347
1.127343
GTGAGAGGGGAAGGGAGATG
58.873
60.000
0.00
0.00
0.00
2.90
3230
3348
1.022903
AGTGAGAGGGGAAGGGAGAT
58.977
55.000
0.00
0.00
0.00
2.75
3231
3349
1.695065
TAGTGAGAGGGGAAGGGAGA
58.305
55.000
0.00
0.00
0.00
3.71
3232
3350
2.502130
GTTTAGTGAGAGGGGAAGGGAG
59.498
54.545
0.00
0.00
0.00
4.30
3233
3351
2.113777
AGTTTAGTGAGAGGGGAAGGGA
59.886
50.000
0.00
0.00
0.00
4.20
3234
3352
2.237392
CAGTTTAGTGAGAGGGGAAGGG
59.763
54.545
0.00
0.00
0.00
3.95
3235
3353
3.055747
GTCAGTTTAGTGAGAGGGGAAGG
60.056
52.174
0.00
0.00
0.00
3.46
3236
3354
3.367498
CGTCAGTTTAGTGAGAGGGGAAG
60.367
52.174
0.00
0.00
0.00
3.46
3237
3355
2.561419
CGTCAGTTTAGTGAGAGGGGAA
59.439
50.000
0.00
0.00
0.00
3.97
3238
3356
2.168496
CGTCAGTTTAGTGAGAGGGGA
58.832
52.381
0.00
0.00
0.00
4.81
3239
3357
1.204941
CCGTCAGTTTAGTGAGAGGGG
59.795
57.143
0.00
0.00
33.59
4.79
3240
3358
1.404315
GCCGTCAGTTTAGTGAGAGGG
60.404
57.143
9.63
0.00
38.65
4.30
3241
3359
1.546476
AGCCGTCAGTTTAGTGAGAGG
59.454
52.381
5.21
5.21
0.00
3.69
3242
3360
3.181495
CCTAGCCGTCAGTTTAGTGAGAG
60.181
52.174
0.00
0.00
0.00
3.20
3243
3361
2.753452
CCTAGCCGTCAGTTTAGTGAGA
59.247
50.000
0.00
0.00
0.00
3.27
3244
3362
2.735762
GCCTAGCCGTCAGTTTAGTGAG
60.736
54.545
0.00
0.00
0.00
3.51
3245
3363
1.203994
GCCTAGCCGTCAGTTTAGTGA
59.796
52.381
0.00
0.00
0.00
3.41
3246
3364
1.641577
GCCTAGCCGTCAGTTTAGTG
58.358
55.000
0.00
0.00
0.00
2.74
3247
3365
0.535797
GGCCTAGCCGTCAGTTTAGT
59.464
55.000
0.00
0.00
39.62
2.24
3248
3366
3.364277
GGCCTAGCCGTCAGTTTAG
57.636
57.895
0.00
0.00
39.62
1.85
3259
3377
0.460459
GGACGAGTTCTTGGCCTAGC
60.460
60.000
9.60
0.00
0.00
3.42
3260
3378
1.135333
GAGGACGAGTTCTTGGCCTAG
59.865
57.143
13.94
8.03
0.00
3.02
3261
3379
1.183549
GAGGACGAGTTCTTGGCCTA
58.816
55.000
13.94
0.00
0.00
3.93
3262
3380
0.543174
AGAGGACGAGTTCTTGGCCT
60.543
55.000
13.86
13.86
0.00
5.19
3263
3381
0.321996
AAGAGGACGAGTTCTTGGCC
59.678
55.000
3.80
3.80
32.65
5.36
3264
3382
1.000955
TGAAGAGGACGAGTTCTTGGC
59.999
52.381
0.00
0.00
33.97
4.52
3265
3383
3.321497
CTTGAAGAGGACGAGTTCTTGG
58.679
50.000
0.00
0.00
33.97
3.61
3266
3384
2.734079
GCTTGAAGAGGACGAGTTCTTG
59.266
50.000
0.00
0.00
33.97
3.02
3267
3385
2.630580
AGCTTGAAGAGGACGAGTTCTT
59.369
45.455
0.00
0.00
36.41
2.52
3268
3386
2.230266
GAGCTTGAAGAGGACGAGTTCT
59.770
50.000
0.00
0.00
0.00
3.01
3269
3387
2.601804
GAGCTTGAAGAGGACGAGTTC
58.398
52.381
0.00
0.00
0.00
3.01
3270
3388
1.273886
GGAGCTTGAAGAGGACGAGTT
59.726
52.381
0.00
0.00
0.00
3.01
3271
3389
0.892063
GGAGCTTGAAGAGGACGAGT
59.108
55.000
0.00
0.00
0.00
4.18
3272
3390
0.891373
TGGAGCTTGAAGAGGACGAG
59.109
55.000
0.00
0.00
0.00
4.18
3273
3391
1.478510
GATGGAGCTTGAAGAGGACGA
59.521
52.381
0.00
0.00
0.00
4.20
3274
3392
1.800655
CGATGGAGCTTGAAGAGGACG
60.801
57.143
0.00
0.00
0.00
4.79
3275
3393
1.205893
ACGATGGAGCTTGAAGAGGAC
59.794
52.381
0.00
0.00
0.00
3.85
3276
3394
1.561643
ACGATGGAGCTTGAAGAGGA
58.438
50.000
0.00
0.00
0.00
3.71
3277
3395
2.005451
CAACGATGGAGCTTGAAGAGG
58.995
52.381
0.00
0.00
0.00
3.69
3278
3396
2.928757
CTCAACGATGGAGCTTGAAGAG
59.071
50.000
0.00
0.00
0.00
2.85
3279
3397
2.964740
CTCAACGATGGAGCTTGAAGA
58.035
47.619
0.00
0.00
0.00
2.87
3287
3405
0.816825
CCATGGGCTCAACGATGGAG
60.817
60.000
2.85
0.00
46.12
3.86
3288
3406
1.224315
CCATGGGCTCAACGATGGA
59.776
57.895
2.85
0.00
46.12
3.41
3289
3407
0.179009
ATCCATGGGCTCAACGATGG
60.179
55.000
13.02
0.00
45.03
3.51
3290
3408
1.335810
CAATCCATGGGCTCAACGATG
59.664
52.381
13.02
0.00
0.00
3.84
3291
3409
1.064463
ACAATCCATGGGCTCAACGAT
60.064
47.619
13.02
0.00
0.00
3.73
3292
3410
0.327924
ACAATCCATGGGCTCAACGA
59.672
50.000
13.02
0.00
0.00
3.85
3293
3411
0.734889
GACAATCCATGGGCTCAACG
59.265
55.000
13.02
0.00
0.00
4.10
3294
3412
2.134789
AGACAATCCATGGGCTCAAC
57.865
50.000
13.02
0.00
0.00
3.18
3295
3413
2.905415
AAGACAATCCATGGGCTCAA
57.095
45.000
13.02
0.00
0.00
3.02
3296
3414
2.621407
GGAAAGACAATCCATGGGCTCA
60.621
50.000
13.02
0.00
36.92
4.26
3297
3415
2.027385
GGAAAGACAATCCATGGGCTC
58.973
52.381
13.02
1.40
36.92
4.70
3298
3416
1.642762
AGGAAAGACAATCCATGGGCT
59.357
47.619
13.02
0.00
39.55
5.19
3299
3417
2.027385
GAGGAAAGACAATCCATGGGC
58.973
52.381
13.02
0.00
39.55
5.36
3300
3418
3.285484
CAGAGGAAAGACAATCCATGGG
58.715
50.000
13.02
0.00
39.55
4.00
3301
3419
2.686915
GCAGAGGAAAGACAATCCATGG
59.313
50.000
4.97
4.97
39.55
3.66
3302
3420
2.686915
GGCAGAGGAAAGACAATCCATG
59.313
50.000
0.00
0.00
39.55
3.66
3303
3421
2.579860
AGGCAGAGGAAAGACAATCCAT
59.420
45.455
0.00
0.00
39.55
3.41
3304
3422
1.988107
AGGCAGAGGAAAGACAATCCA
59.012
47.619
0.00
0.00
39.55
3.41
3305
3423
2.363683
CAGGCAGAGGAAAGACAATCC
58.636
52.381
0.00
0.00
37.22
3.01
3306
3424
1.742268
GCAGGCAGAGGAAAGACAATC
59.258
52.381
0.00
0.00
0.00
2.67
3307
3425
1.615384
GGCAGGCAGAGGAAAGACAAT
60.615
52.381
0.00
0.00
0.00
2.71
3308
3426
0.250901
GGCAGGCAGAGGAAAGACAA
60.251
55.000
0.00
0.00
0.00
3.18
3309
3427
1.376466
GGCAGGCAGAGGAAAGACA
59.624
57.895
0.00
0.00
0.00
3.41
3310
3428
1.743252
CGGCAGGCAGAGGAAAGAC
60.743
63.158
0.00
0.00
0.00
3.01
3311
3429
2.665000
CGGCAGGCAGAGGAAAGA
59.335
61.111
0.00
0.00
0.00
2.52
3312
3430
3.130160
GCGGCAGGCAGAGGAAAG
61.130
66.667
0.00
0.00
42.87
2.62
3334
3452
4.436998
CTCCTCGCCACCGGTCAC
62.437
72.222
2.59
0.00
34.56
3.67
3339
3457
2.356818
GATTCTCCTCCTCGCCACCG
62.357
65.000
0.00
0.00
0.00
4.94
3340
3458
1.443828
GATTCTCCTCCTCGCCACC
59.556
63.158
0.00
0.00
0.00
4.61
3341
3459
1.045911
AGGATTCTCCTCCTCGCCAC
61.046
60.000
0.00
0.00
45.66
5.01
3342
3460
1.045350
CAGGATTCTCCTCCTCGCCA
61.045
60.000
0.00
0.00
45.66
5.69
3343
3461
0.757188
TCAGGATTCTCCTCCTCGCC
60.757
60.000
0.00
0.00
45.66
5.54
3344
3462
0.387565
GTCAGGATTCTCCTCCTCGC
59.612
60.000
0.00
0.00
45.66
5.03
3345
3463
0.665835
CGTCAGGATTCTCCTCCTCG
59.334
60.000
0.00
0.00
45.66
4.63
3346
3464
0.387565
GCGTCAGGATTCTCCTCCTC
59.612
60.000
0.00
0.00
45.66
3.71
3347
3465
1.045911
GGCGTCAGGATTCTCCTCCT
61.046
60.000
0.00
0.00
45.66
3.69
3348
3466
1.045911
AGGCGTCAGGATTCTCCTCC
61.046
60.000
0.00
0.00
45.66
4.30
3349
3467
0.387565
GAGGCGTCAGGATTCTCCTC
59.612
60.000
0.52
0.00
45.66
3.71
3351
3469
1.066587
CGAGGCGTCAGGATTCTCC
59.933
63.158
7.26
0.00
36.58
3.71
3352
3470
0.248702
GTCGAGGCGTCAGGATTCTC
60.249
60.000
7.26
0.00
0.00
2.87
3353
3471
0.681564
AGTCGAGGCGTCAGGATTCT
60.682
55.000
7.26
0.00
0.00
2.40
3354
3472
0.173708
AAGTCGAGGCGTCAGGATTC
59.826
55.000
7.26
0.00
0.00
2.52
3355
3473
0.173708
GAAGTCGAGGCGTCAGGATT
59.826
55.000
7.26
0.00
0.00
3.01
3356
3474
1.810532
GAAGTCGAGGCGTCAGGAT
59.189
57.895
7.26
0.00
0.00
3.24
3357
3475
2.687805
CGAAGTCGAGGCGTCAGGA
61.688
63.158
7.26
0.00
43.02
3.86
3358
3476
2.202492
CGAAGTCGAGGCGTCAGG
60.202
66.667
7.26
0.00
43.02
3.86
3359
3477
2.868196
TCGAAGTCGAGGCGTCAG
59.132
61.111
7.26
0.00
44.22
3.51
3368
3486
5.793026
ACCTAAACTACTAGTCGAAGTCG
57.207
43.478
0.00
0.00
41.45
4.18
3409
3527
4.729918
AAGCCCCGCCTCTGCAAG
62.730
66.667
0.00
0.00
37.32
4.01
3430
3548
2.813474
TTGAAGCGCGACCATCCG
60.813
61.111
12.10
0.00
0.00
4.18
3431
3549
1.369091
ATGTTGAAGCGCGACCATCC
61.369
55.000
12.10
0.00
0.00
3.51
3432
3550
0.026803
GATGTTGAAGCGCGACCATC
59.973
55.000
12.10
7.28
0.00
3.51
3433
3551
1.695893
CGATGTTGAAGCGCGACCAT
61.696
55.000
12.10
0.87
0.00
3.55
3434
3552
2.379634
CGATGTTGAAGCGCGACCA
61.380
57.895
12.10
0.00
0.00
4.02
3435
3553
2.092291
TCGATGTTGAAGCGCGACC
61.092
57.895
12.10
0.00
0.00
4.79
3436
3554
1.057361
GTCGATGTTGAAGCGCGAC
59.943
57.895
12.10
0.04
43.37
5.19
3437
3555
0.666274
AAGTCGATGTTGAAGCGCGA
60.666
50.000
12.10
0.00
0.00
5.87
3438
3556
0.163788
AAAGTCGATGTTGAAGCGCG
59.836
50.000
0.00
0.00
0.00
6.86
3439
3557
2.316119
AAAAGTCGATGTTGAAGCGC
57.684
45.000
0.00
0.00
0.00
5.92
3440
3558
4.133856
AGAAAAAGTCGATGTTGAAGCG
57.866
40.909
0.00
0.00
0.00
4.68
3441
3559
5.985781
TGTAGAAAAAGTCGATGTTGAAGC
58.014
37.500
0.00
0.00
0.00
3.86
3442
3560
7.406553
TGTTGTAGAAAAAGTCGATGTTGAAG
58.593
34.615
0.00
0.00
0.00
3.02
3443
3561
7.310072
TGTTGTAGAAAAAGTCGATGTTGAA
57.690
32.000
0.00
0.00
0.00
2.69
3444
3562
6.912203
TGTTGTAGAAAAAGTCGATGTTGA
57.088
33.333
0.00
0.00
0.00
3.18
3445
3563
6.138546
CGTTGTTGTAGAAAAAGTCGATGTTG
59.861
38.462
0.00
0.00
0.00
3.33
3446
3564
6.183360
ACGTTGTTGTAGAAAAAGTCGATGTT
60.183
34.615
0.00
0.00
0.00
2.71
3447
3565
5.292589
ACGTTGTTGTAGAAAAAGTCGATGT
59.707
36.000
0.00
0.00
0.00
3.06
3448
3566
5.734311
ACGTTGTTGTAGAAAAAGTCGATG
58.266
37.500
0.00
0.00
0.00
3.84
3449
3567
5.751990
AGACGTTGTTGTAGAAAAAGTCGAT
59.248
36.000
0.00
0.00
37.38
3.59
3450
3568
5.104374
AGACGTTGTTGTAGAAAAAGTCGA
58.896
37.500
0.00
0.00
37.38
4.20
3451
3569
5.231568
AGAGACGTTGTTGTAGAAAAAGTCG
59.768
40.000
0.00
0.00
37.38
4.18
3452
3570
6.585389
AGAGACGTTGTTGTAGAAAAAGTC
57.415
37.500
0.00
0.00
34.01
3.01
3453
3571
6.197842
CGTAGAGACGTTGTTGTAGAAAAAGT
59.802
38.462
0.00
0.00
44.31
2.66
3454
3572
6.569821
CGTAGAGACGTTGTTGTAGAAAAAG
58.430
40.000
0.00
0.00
44.31
2.27
3455
3573
6.500775
CGTAGAGACGTTGTTGTAGAAAAA
57.499
37.500
0.00
0.00
44.31
1.94
3470
3588
6.320944
AGGACGTTTATTCTTTCGTAGAGAC
58.679
40.000
0.00
0.00
38.43
3.36
3471
3589
6.149973
TGAGGACGTTTATTCTTTCGTAGAGA
59.850
38.462
0.00
0.00
38.43
3.10
3472
3590
6.250951
GTGAGGACGTTTATTCTTTCGTAGAG
59.749
42.308
0.00
0.00
38.43
2.43
3473
3591
6.088824
GTGAGGACGTTTATTCTTTCGTAGA
58.911
40.000
0.00
0.00
36.67
2.59
3474
3592
5.003214
CGTGAGGACGTTTATTCTTTCGTAG
59.997
44.000
0.00
0.00
40.91
3.51
3475
3593
4.853196
CGTGAGGACGTTTATTCTTTCGTA
59.147
41.667
0.00
0.00
40.91
3.43
3476
3594
3.671928
CGTGAGGACGTTTATTCTTTCGT
59.328
43.478
0.00
0.00
40.91
3.85
3477
3595
4.227177
CGTGAGGACGTTTATTCTTTCG
57.773
45.455
0.00
0.00
40.91
3.46
3498
3616
2.202932
AGGCATGGCGTCGATGAC
60.203
61.111
14.30
6.06
0.00
3.06
3499
3617
2.202919
CAGGCATGGCGTCGATGA
60.203
61.111
14.30
0.00
0.00
2.92
3500
3618
3.274586
CCAGGCATGGCGTCGATG
61.275
66.667
14.30
6.04
40.52
3.84
3509
3627
2.484062
GCCATTCCGTCCAGGCATG
61.484
63.158
0.00
0.00
46.26
4.06
3510
3628
2.124151
GCCATTCCGTCCAGGCAT
60.124
61.111
0.00
0.00
46.26
4.40
3512
3630
4.115199
AGGCCATTCCGTCCAGGC
62.115
66.667
5.01
0.00
46.28
4.85
3513
3631
2.124570
CAGGCCATTCCGTCCAGG
60.125
66.667
5.01
0.00
40.77
4.45
3514
3632
2.124570
CCAGGCCATTCCGTCCAG
60.125
66.667
5.01
0.00
40.77
3.86
3515
3633
2.609299
TCCAGGCCATTCCGTCCA
60.609
61.111
5.01
0.00
40.77
4.02
3516
3634
2.124695
GTCCAGGCCATTCCGTCC
60.125
66.667
5.01
0.00
40.77
4.79
3517
3635
0.608035
TTTGTCCAGGCCATTCCGTC
60.608
55.000
5.01
0.00
40.77
4.79
3518
3636
0.609131
CTTTGTCCAGGCCATTCCGT
60.609
55.000
5.01
0.00
40.77
4.69
3519
3637
0.322456
TCTTTGTCCAGGCCATTCCG
60.322
55.000
5.01
0.00
40.77
4.30
3520
3638
2.149973
ATCTTTGTCCAGGCCATTCC
57.850
50.000
5.01
0.00
0.00
3.01
3521
3639
4.021192
TGAAAATCTTTGTCCAGGCCATTC
60.021
41.667
5.01
0.00
0.00
2.67
3522
3640
3.903090
TGAAAATCTTTGTCCAGGCCATT
59.097
39.130
5.01
0.00
0.00
3.16
3523
3641
3.509442
TGAAAATCTTTGTCCAGGCCAT
58.491
40.909
5.01
0.00
0.00
4.40
3524
3642
2.956132
TGAAAATCTTTGTCCAGGCCA
58.044
42.857
5.01
0.00
0.00
5.36
3525
3643
3.766051
AGATGAAAATCTTTGTCCAGGCC
59.234
43.478
0.00
0.00
0.00
5.19
3526
3644
5.166398
CAAGATGAAAATCTTTGTCCAGGC
58.834
41.667
0.00
0.00
38.73
4.85
3527
3645
5.244626
ACCAAGATGAAAATCTTTGTCCAGG
59.755
40.000
0.00
0.00
38.73
4.45
3528
3646
6.336842
ACCAAGATGAAAATCTTTGTCCAG
57.663
37.500
0.00
0.00
38.73
3.86
3529
3647
6.239289
GGAACCAAGATGAAAATCTTTGTCCA
60.239
38.462
5.86
0.00
38.73
4.02
3530
3648
6.159293
GGAACCAAGATGAAAATCTTTGTCC
58.841
40.000
5.86
6.08
38.73
4.02
3531
3649
5.858581
CGGAACCAAGATGAAAATCTTTGTC
59.141
40.000
5.86
1.81
38.73
3.18
3532
3650
5.278957
CCGGAACCAAGATGAAAATCTTTGT
60.279
40.000
0.00
0.00
38.73
2.83
3533
3651
5.048083
TCCGGAACCAAGATGAAAATCTTTG
60.048
40.000
0.00
0.00
38.73
2.77
3534
3652
5.076873
TCCGGAACCAAGATGAAAATCTTT
58.923
37.500
0.00
0.00
38.73
2.52
3535
3653
4.662278
TCCGGAACCAAGATGAAAATCTT
58.338
39.130
0.00
0.00
41.23
2.40
3536
3654
4.019321
TCTCCGGAACCAAGATGAAAATCT
60.019
41.667
5.23
0.00
0.00
2.40
3537
3655
4.261801
TCTCCGGAACCAAGATGAAAATC
58.738
43.478
5.23
0.00
0.00
2.17
3538
3656
4.301072
TCTCCGGAACCAAGATGAAAAT
57.699
40.909
5.23
0.00
0.00
1.82
3539
3657
3.780804
TCTCCGGAACCAAGATGAAAA
57.219
42.857
5.23
0.00
0.00
2.29
Based at the University of Bristol with support from BBSRC .
AutoCloner maintained by Alex Coulton.