Multiple sequence alignment - TraesCS1D01G420400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G420400 chr1D 100.000 4632 0 0 1 4632 476873673 476869042 0.000000e+00 8554.0
1 TraesCS1D01G420400 chr1D 77.778 612 104 20 1031 1638 362013089 362012506 9.540000e-92 348.0
2 TraesCS1D01G420400 chr1D 77.561 615 106 17 1031 1641 362132449 362131863 4.440000e-90 342.0
3 TraesCS1D01G420400 chr1A 93.218 1622 58 16 118 1722 573034266 573032680 0.000000e+00 2338.0
4 TraesCS1D01G420400 chr1A 92.818 919 54 7 2846 3758 573031079 573030167 0.000000e+00 1321.0
5 TraesCS1D01G420400 chr1A 95.428 678 31 0 3079 3756 572881257 572880580 0.000000e+00 1081.0
6 TraesCS1D01G420400 chr1A 92.598 662 38 2 895 1554 572892589 572893241 0.000000e+00 941.0
7 TraesCS1D01G420400 chr1A 88.403 457 37 9 2635 3079 572886123 572885671 1.900000e-148 536.0
8 TraesCS1D01G420400 chr1A 81.894 602 42 23 227 777 572894093 572893508 3.290000e-121 446.0
9 TraesCS1D01G420400 chr1A 79.752 484 96 2 3038 3520 572997698 572997216 2.650000e-92 350.0
10 TraesCS1D01G420400 chr1A 77.687 614 101 22 1031 1638 461523909 461523326 4.440000e-90 342.0
11 TraesCS1D01G420400 chr1A 86.824 296 30 8 2560 2848 573031609 573031316 5.780000e-84 322.0
12 TraesCS1D01G420400 chr1A 80.757 317 45 11 2594 2905 572887618 572887313 2.790000e-57 233.0
13 TraesCS1D01G420400 chr1A 95.238 126 4 2 3 127 481651092 481650968 1.020000e-46 198.0
14 TraesCS1D01G420400 chr1A 84.247 146 11 6 1592 1729 572891052 572890911 1.050000e-26 132.0
15 TraesCS1D01G420400 chr1B 93.401 1076 63 5 2689 3759 664319530 664320602 0.000000e+00 1587.0
16 TraesCS1D01G420400 chr1B 88.296 1350 88 30 441 1737 664317241 664318573 0.000000e+00 1554.0
17 TraesCS1D01G420400 chr1B 91.403 442 35 3 4189 4630 489925114 489925552 1.840000e-168 603.0
18 TraesCS1D01G420400 chr1B 78.268 612 101 17 1031 1638 484465107 484464524 9.470000e-97 364.0
19 TraesCS1D01G420400 chr1B 77.273 616 106 18 1031 1641 484692735 484692149 9.610000e-87 331.0
20 TraesCS1D01G420400 chr1B 90.110 91 6 1 152 239 664316907 664316997 1.050000e-21 115.0
21 TraesCS1D01G420400 chr6A 92.890 436 30 1 4195 4630 33180755 33181189 2.350000e-177 632.0
22 TraesCS1D01G420400 chr6A 89.104 413 44 1 3786 4198 33180308 33180719 3.200000e-141 512.0
23 TraesCS1D01G420400 chr7B 92.325 443 29 5 4189 4630 71338879 71338441 3.930000e-175 625.0
24 TraesCS1D01G420400 chr7B 91.646 407 33 1 3793 4199 71339314 71338909 3.130000e-156 562.0
25 TraesCS1D01G420400 chr7B 96.639 119 4 0 3 121 454819187 454819305 1.020000e-46 198.0
26 TraesCS1D01G420400 chr7B 83.607 61 9 1 1907 1967 365369551 365369610 6.470000e-04 56.5
27 TraesCS1D01G420400 chr3A 92.099 443 27 4 4189 4630 136521275 136520840 6.580000e-173 617.0
28 TraesCS1D01G420400 chr3A 89.786 421 41 2 3779 4199 136521723 136521305 5.270000e-149 538.0
29 TraesCS1D01G420400 chr3A 90.097 414 38 3 3786 4199 656958315 656958725 6.820000e-148 534.0
30 TraesCS1D01G420400 chr3A 95.200 125 4 2 3 125 287820808 287820932 3.660000e-46 196.0
31 TraesCS1D01G420400 chr3A 91.228 57 5 0 2150 2206 697753613 697753557 1.380000e-10 78.7
32 TraesCS1D01G420400 chr3B 91.892 444 31 5 4189 4630 532903089 532903529 2.370000e-172 616.0
33 TraesCS1D01G420400 chr3B 90.349 373 35 1 3822 4194 532902683 532903054 5.390000e-134 488.0
34 TraesCS1D01G420400 chr2D 91.629 442 35 2 4189 4630 470138452 470138891 1.100000e-170 610.0
35 TraesCS1D01G420400 chr2D 91.534 378 32 0 3822 4199 470138045 470138422 5.310000e-144 521.0
36 TraesCS1D01G420400 chr2D 85.455 55 7 1 1913 1966 24978644 24978590 6.470000e-04 56.5
37 TraesCS1D01G420400 chr2B 91.176 442 37 2 4189 4630 150145036 150145475 2.390000e-167 599.0
38 TraesCS1D01G420400 chr2B 96.667 120 3 1 3 121 784509319 784509200 1.020000e-46 198.0
39 TraesCS1D01G420400 chr2B 94.531 128 5 2 1 127 683761976 683761850 3.660000e-46 196.0
40 TraesCS1D01G420400 chr7A 92.000 425 31 3 4189 4613 562319739 562319318 1.110000e-165 593.0
41 TraesCS1D01G420400 chr7A 89.614 414 43 0 3786 4199 562320182 562319769 1.140000e-145 527.0
42 TraesCS1D01G420400 chr5D 90.971 443 36 4 4189 4630 221883498 221883059 1.110000e-165 593.0
43 TraesCS1D01G420400 chr5D 92.840 405 29 0 3795 4199 3829953 3829549 5.160000e-164 588.0
44 TraesCS1D01G420400 chr5D 89.737 419 42 1 3782 4199 221883946 221883528 6.820000e-148 534.0
45 TraesCS1D01G420400 chr6B 95.968 124 4 1 3 125 159156915 159156792 2.830000e-47 200.0
46 TraesCS1D01G420400 chr4D 96.694 121 3 1 3 122 425527695 425527815 2.830000e-47 200.0
47 TraesCS1D01G420400 chr5B 95.902 122 4 1 3 123 70794219 70794340 3.660000e-46 196.0
48 TraesCS1D01G420400 chr4B 95.902 122 4 1 3 123 99437033 99436912 3.660000e-46 196.0
49 TraesCS1D01G420400 chr3D 87.069 116 13 2 1368 1482 326120754 326120640 3.760000e-26 130.0
50 TraesCS1D01G420400 chr7D 84.615 104 10 4 2149 2252 119741177 119741080 1.060000e-16 99.0
51 TraesCS1D01G420400 chr2A 88.525 61 6 1 1907 1967 139859751 139859692 6.430000e-09 73.1
52 TraesCS1D01G420400 chr2A 88.525 61 6 1 1907 1967 632618655 632618596 6.430000e-09 73.1
53 TraesCS1D01G420400 chr2A 96.875 32 0 1 1935 1965 746759539 746759570 8.000000e-03 52.8
54 TraesCS1D01G420400 chr5A 86.885 61 7 1 1907 1967 180343762 180343821 2.990000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G420400 chr1D 476869042 476873673 4631 True 8554.000000 8554 100.000000 1 4632 1 chr1D.!!$R3 4631
1 TraesCS1D01G420400 chr1D 362012506 362013089 583 True 348.000000 348 77.778000 1031 1638 1 chr1D.!!$R1 607
2 TraesCS1D01G420400 chr1D 362131863 362132449 586 True 342.000000 342 77.561000 1031 1641 1 chr1D.!!$R2 610
3 TraesCS1D01G420400 chr1A 573030167 573034266 4099 True 1327.000000 2338 90.953333 118 3758 3 chr1A.!!$R6 3640
4 TraesCS1D01G420400 chr1A 572880580 572881257 677 True 1081.000000 1081 95.428000 3079 3756 1 chr1A.!!$R3 677
5 TraesCS1D01G420400 chr1A 572892589 572893241 652 False 941.000000 941 92.598000 895 1554 1 chr1A.!!$F1 659
6 TraesCS1D01G420400 chr1A 461523326 461523909 583 True 342.000000 342 77.687000 1031 1638 1 chr1A.!!$R1 607
7 TraesCS1D01G420400 chr1A 572885671 572894093 8422 True 336.750000 536 83.825250 227 3079 4 chr1A.!!$R5 2852
8 TraesCS1D01G420400 chr1B 664316907 664320602 3695 False 1085.333333 1587 90.602333 152 3759 3 chr1B.!!$F2 3607
9 TraesCS1D01G420400 chr1B 484464524 484465107 583 True 364.000000 364 78.268000 1031 1638 1 chr1B.!!$R1 607
10 TraesCS1D01G420400 chr1B 484692149 484692735 586 True 331.000000 331 77.273000 1031 1641 1 chr1B.!!$R2 610
11 TraesCS1D01G420400 chr6A 33180308 33181189 881 False 572.000000 632 90.997000 3786 4630 2 chr6A.!!$F1 844
12 TraesCS1D01G420400 chr7B 71338441 71339314 873 True 593.500000 625 91.985500 3793 4630 2 chr7B.!!$R1 837
13 TraesCS1D01G420400 chr3A 136520840 136521723 883 True 577.500000 617 90.942500 3779 4630 2 chr3A.!!$R2 851
14 TraesCS1D01G420400 chr3B 532902683 532903529 846 False 552.000000 616 91.120500 3822 4630 2 chr3B.!!$F1 808
15 TraesCS1D01G420400 chr2D 470138045 470138891 846 False 565.500000 610 91.581500 3822 4630 2 chr2D.!!$F1 808
16 TraesCS1D01G420400 chr7A 562319318 562320182 864 True 560.000000 593 90.807000 3786 4613 2 chr7A.!!$R1 827
17 TraesCS1D01G420400 chr5D 221883059 221883946 887 True 563.500000 593 90.354000 3782 4630 2 chr5D.!!$R2 848

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
263 268 0.460284 CGTGCCTATCCACTCCACAC 60.460 60.0 0.00 0.0 33.6 3.82 F
1935 3831 0.184933 AAGTTGTACCAAGGCTGCCA 59.815 50.0 22.65 0.0 0.0 4.92 F
2259 6982 0.247736 AGGTGCTCTAAGGCTGAACG 59.752 55.0 0.00 0.0 0.0 3.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2242 6965 0.037232 ACCGTTCAGCCTTAGAGCAC 60.037 55.0 0.00 0.0 34.23 4.40 R
2897 10019 0.307453 TGCTTTCATGTGTGTGTCGC 59.693 50.0 0.00 0.0 0.00 5.19 R
4250 11422 0.234106 CCATCACTCGATCGCAATGC 59.766 55.0 11.09 0.0 0.00 3.56 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.773239 TTCGTCCGAAAATACTTGTCATC 57.227 39.130 0.00 0.00 0.00 2.92
23 24 4.811908 TCGTCCGAAAATACTTGTCATCA 58.188 39.130 0.00 0.00 0.00 3.07
24 25 5.231702 TCGTCCGAAAATACTTGTCATCAA 58.768 37.500 0.00 0.00 0.00 2.57
25 26 5.697178 TCGTCCGAAAATACTTGTCATCAAA 59.303 36.000 0.00 0.00 32.87 2.69
26 27 6.203145 TCGTCCGAAAATACTTGTCATCAAAA 59.797 34.615 0.00 0.00 32.87 2.44
27 28 7.021196 CGTCCGAAAATACTTGTCATCAAAAT 58.979 34.615 0.00 0.00 32.87 1.82
28 29 7.007367 CGTCCGAAAATACTTGTCATCAAAATG 59.993 37.037 0.00 0.00 32.87 2.32
29 30 7.273381 GTCCGAAAATACTTGTCATCAAAATGG 59.727 37.037 0.00 0.00 33.42 3.16
30 31 7.175816 TCCGAAAATACTTGTCATCAAAATGGA 59.824 33.333 0.00 0.00 33.42 3.41
31 32 7.975616 CCGAAAATACTTGTCATCAAAATGGAT 59.024 33.333 0.00 0.00 33.42 3.41
38 39 7.614494 ACTTGTCATCAAAATGGATAAAAGGG 58.386 34.615 0.00 0.00 33.42 3.95
39 40 6.543430 TGTCATCAAAATGGATAAAAGGGG 57.457 37.500 0.00 0.00 33.42 4.79
40 41 6.259893 TGTCATCAAAATGGATAAAAGGGGA 58.740 36.000 0.00 0.00 33.42 4.81
41 42 6.902416 TGTCATCAAAATGGATAAAAGGGGAT 59.098 34.615 0.00 0.00 33.42 3.85
42 43 7.147689 TGTCATCAAAATGGATAAAAGGGGATG 60.148 37.037 0.00 0.00 33.42 3.51
43 44 5.612725 TCAAAATGGATAAAAGGGGATGC 57.387 39.130 0.00 0.00 0.00 3.91
44 45 5.028802 TCAAAATGGATAAAAGGGGATGCA 58.971 37.500 0.00 0.00 0.00 3.96
45 46 5.666718 TCAAAATGGATAAAAGGGGATGCAT 59.333 36.000 0.00 0.00 35.84 3.96
46 47 5.813513 AAATGGATAAAAGGGGATGCATC 57.186 39.130 18.81 18.81 33.50 3.91
47 48 4.754411 ATGGATAAAAGGGGATGCATCT 57.246 40.909 25.28 7.83 29.02 2.90
48 49 5.865977 ATGGATAAAAGGGGATGCATCTA 57.134 39.130 25.28 9.84 29.02 1.98
49 50 5.246981 TGGATAAAAGGGGATGCATCTAG 57.753 43.478 25.28 0.00 0.00 2.43
50 51 4.913355 TGGATAAAAGGGGATGCATCTAGA 59.087 41.667 25.28 0.00 0.00 2.43
51 52 5.221925 TGGATAAAAGGGGATGCATCTAGAC 60.222 44.000 25.28 13.29 0.00 2.59
52 53 5.221925 GGATAAAAGGGGATGCATCTAGACA 60.222 44.000 25.28 6.55 0.00 3.41
53 54 4.803329 AAAAGGGGATGCATCTAGACAT 57.197 40.909 25.28 9.21 0.00 3.06
54 55 5.912149 AAAAGGGGATGCATCTAGACATA 57.088 39.130 25.28 0.00 0.00 2.29
55 56 6.460103 AAAAGGGGATGCATCTAGACATAT 57.540 37.500 25.28 3.97 0.00 1.78
56 57 6.460103 AAAGGGGATGCATCTAGACATATT 57.540 37.500 25.28 8.12 0.00 1.28
57 58 6.460103 AAGGGGATGCATCTAGACATATTT 57.540 37.500 25.28 5.75 0.00 1.40
58 59 6.460103 AGGGGATGCATCTAGACATATTTT 57.540 37.500 25.28 0.00 0.00 1.82
59 60 7.574021 AGGGGATGCATCTAGACATATTTTA 57.426 36.000 25.28 0.00 0.00 1.52
60 61 7.628234 AGGGGATGCATCTAGACATATTTTAG 58.372 38.462 25.28 0.00 0.00 1.85
61 62 7.238514 AGGGGATGCATCTAGACATATTTTAGT 59.761 37.037 25.28 0.00 0.00 2.24
62 63 7.885399 GGGGATGCATCTAGACATATTTTAGTT 59.115 37.037 25.28 0.00 0.00 2.24
63 64 8.940952 GGGATGCATCTAGACATATTTTAGTTC 58.059 37.037 25.28 2.81 0.00 3.01
64 65 9.717942 GGATGCATCTAGACATATTTTAGTTCT 57.282 33.333 25.28 0.00 0.00 3.01
95 96 9.246670 ACATCTCTTTTATCCATTTTGATGACA 57.753 29.630 0.00 0.00 34.62 3.58
98 99 9.300681 TCTCTTTTATCCATTTTGATGACAAGT 57.699 29.630 0.00 0.00 37.32 3.16
105 106 8.915871 ATCCATTTTGATGACAAGTATTTTCG 57.084 30.769 0.00 0.00 37.32 3.46
106 107 7.312154 TCCATTTTGATGACAAGTATTTTCGG 58.688 34.615 0.00 0.00 37.32 4.30
107 108 7.175816 TCCATTTTGATGACAAGTATTTTCGGA 59.824 33.333 0.00 0.00 37.32 4.55
108 109 7.273381 CCATTTTGATGACAAGTATTTTCGGAC 59.727 37.037 0.00 0.00 37.32 4.79
109 110 5.524511 TTGATGACAAGTATTTTCGGACG 57.475 39.130 0.00 0.00 0.00 4.79
110 111 4.811908 TGATGACAAGTATTTTCGGACGA 58.188 39.130 0.00 0.00 0.00 4.20
111 112 5.231702 TGATGACAAGTATTTTCGGACGAA 58.768 37.500 2.62 2.62 0.00 3.85
112 113 5.347635 TGATGACAAGTATTTTCGGACGAAG 59.652 40.000 7.25 0.00 35.38 3.79
113 114 3.991773 TGACAAGTATTTTCGGACGAAGG 59.008 43.478 7.25 0.00 35.38 3.46
114 115 3.332034 ACAAGTATTTTCGGACGAAGGG 58.668 45.455 7.25 0.00 35.38 3.95
115 116 3.007182 ACAAGTATTTTCGGACGAAGGGA 59.993 43.478 7.25 0.00 35.38 4.20
116 117 3.521947 AGTATTTTCGGACGAAGGGAG 57.478 47.619 7.25 0.00 35.38 4.30
117 118 2.830321 AGTATTTTCGGACGAAGGGAGT 59.170 45.455 7.25 0.00 35.38 3.85
118 119 4.019174 AGTATTTTCGGACGAAGGGAGTA 58.981 43.478 7.25 0.00 35.38 2.59
119 120 2.730550 TTTTCGGACGAAGGGAGTAC 57.269 50.000 7.25 0.00 35.38 2.73
120 121 1.619654 TTTCGGACGAAGGGAGTACA 58.380 50.000 7.25 0.00 35.38 2.90
121 122 1.619654 TTCGGACGAAGGGAGTACAA 58.380 50.000 2.62 0.00 0.00 2.41
122 123 1.619654 TCGGACGAAGGGAGTACAAA 58.380 50.000 0.00 0.00 0.00 2.83
131 132 6.803642 ACGAAGGGAGTACAAACTATGATAC 58.196 40.000 0.00 0.00 35.56 2.24
133 134 5.197682 AGGGAGTACAAACTATGATACGC 57.802 43.478 0.00 0.00 35.56 4.42
134 135 3.979495 GGGAGTACAAACTATGATACGCG 59.021 47.826 3.53 3.53 35.56 6.01
137 138 4.856664 AGTACAAACTATGATACGCGAGG 58.143 43.478 15.93 0.00 32.84 4.63
138 139 2.470821 ACAAACTATGATACGCGAGGC 58.529 47.619 15.93 0.76 0.00 4.70
139 140 2.159156 ACAAACTATGATACGCGAGGCA 60.159 45.455 15.93 7.65 0.00 4.75
159 161 3.945285 GCATACCCTCGAAAGAAAATCCA 59.055 43.478 0.00 0.00 41.32 3.41
218 223 3.040147 TCATTCAGTCACTCGTTTCCC 57.960 47.619 0.00 0.00 0.00 3.97
223 228 1.064825 AGTCACTCGTTTCCCCCATT 58.935 50.000 0.00 0.00 0.00 3.16
233 238 3.584834 GTTTCCCCCATTCGTTCATTTG 58.415 45.455 0.00 0.00 0.00 2.32
263 268 0.460284 CGTGCCTATCCACTCCACAC 60.460 60.000 0.00 0.00 33.60 3.82
317 322 3.129871 CGGCACATGAAAAACACCAATT 58.870 40.909 0.00 0.00 0.00 2.32
344 349 2.762535 AAACCTACCACCGACTGATG 57.237 50.000 0.00 0.00 0.00 3.07
522 611 4.020128 GGATGACCAACCTAGTTTCTCAGT 60.020 45.833 0.00 0.00 35.97 3.41
550 639 4.316823 AGTCACCCGCTCCCTCCA 62.317 66.667 0.00 0.00 0.00 3.86
571 660 2.696989 GGCCAAGCCTTGCATTTAAT 57.303 45.000 0.00 0.00 46.69 1.40
789 910 2.288395 CCGTTGCAAAGCTGGATTCTTT 60.288 45.455 0.00 0.00 34.37 2.52
794 915 5.125100 TGCAAAGCTGGATTCTTTACAAG 57.875 39.130 0.00 0.00 32.94 3.16
1563 2175 4.796231 GACTCCGCCGTCGTGCAT 62.796 66.667 0.00 0.00 0.00 3.96
1623 3503 1.490490 TCCAAGTTCAACCAGCAGAGT 59.510 47.619 0.00 0.00 0.00 3.24
1657 3537 3.003378 GGTGAGCGTTACTTGCTTTTCTT 59.997 43.478 0.00 0.00 44.18 2.52
1658 3538 4.497507 GGTGAGCGTTACTTGCTTTTCTTT 60.498 41.667 0.00 0.00 44.18 2.52
1662 3546 6.073765 TGAGCGTTACTTGCTTTTCTTTCTAG 60.074 38.462 0.00 0.00 44.18 2.43
1683 3567 1.002366 CTTGATTGCCGGAAGAGACG 58.998 55.000 5.05 0.00 0.00 4.18
1685 3569 0.824109 TGATTGCCGGAAGAGACGAT 59.176 50.000 5.05 0.00 0.00 3.73
1690 3574 1.989966 GCCGGAAGAGACGATCGACA 61.990 60.000 24.34 0.00 0.00 4.35
1731 3623 5.134202 CATGTGCATGCATCTATGGAAAT 57.866 39.130 25.64 4.10 29.97 2.17
1732 3624 5.538118 CATGTGCATGCATCTATGGAAATT 58.462 37.500 25.64 0.00 29.97 1.82
1733 3625 6.683715 CATGTGCATGCATCTATGGAAATTA 58.316 36.000 25.64 0.00 29.97 1.40
1739 3631 7.658167 TGCATGCATCTATGGAAATTAAATTGG 59.342 33.333 18.46 0.00 0.00 3.16
1741 3633 9.550406 CATGCATCTATGGAAATTAAATTGGTT 57.450 29.630 0.00 0.00 0.00 3.67
1742 3634 8.945481 TGCATCTATGGAAATTAAATTGGTTG 57.055 30.769 0.00 0.00 0.00 3.77
1743 3635 8.538701 TGCATCTATGGAAATTAAATTGGTTGT 58.461 29.630 0.00 0.00 0.00 3.32
1746 3638 7.327214 TCTATGGAAATTAAATTGGTTGTGCC 58.673 34.615 0.00 0.00 37.90 5.01
1755 3647 2.983433 TGGTTGTGCCATTTTTGCG 58.017 47.368 0.00 0.00 43.61 4.85
1756 3648 0.461548 TGGTTGTGCCATTTTTGCGA 59.538 45.000 0.00 0.00 43.61 5.10
1757 3649 1.134699 TGGTTGTGCCATTTTTGCGAA 60.135 42.857 0.00 0.00 43.61 4.70
1758 3650 2.142319 GGTTGTGCCATTTTTGCGAAT 58.858 42.857 0.00 0.00 37.17 3.34
1759 3651 3.243873 TGGTTGTGCCATTTTTGCGAATA 60.244 39.130 0.00 0.00 43.61 1.75
1760 3652 3.743396 GGTTGTGCCATTTTTGCGAATAA 59.257 39.130 0.00 0.00 37.17 1.40
1761 3653 4.143137 GGTTGTGCCATTTTTGCGAATAAG 60.143 41.667 0.00 0.00 37.17 1.73
1762 3654 4.511617 TGTGCCATTTTTGCGAATAAGA 57.488 36.364 0.00 0.00 0.00 2.10
1763 3655 4.876125 TGTGCCATTTTTGCGAATAAGAA 58.124 34.783 0.00 0.00 0.00 2.52
1764 3656 5.292765 TGTGCCATTTTTGCGAATAAGAAA 58.707 33.333 0.00 0.00 0.00 2.52
1765 3657 5.931146 TGTGCCATTTTTGCGAATAAGAAAT 59.069 32.000 0.00 0.00 0.00 2.17
1766 3658 7.093354 TGTGCCATTTTTGCGAATAAGAAATA 58.907 30.769 0.00 0.00 0.00 1.40
1767 3659 7.062839 TGTGCCATTTTTGCGAATAAGAAATAC 59.937 33.333 0.00 0.00 0.00 1.89
1768 3660 6.252441 TGCCATTTTTGCGAATAAGAAATACG 59.748 34.615 0.00 0.00 0.00 3.06
1769 3661 6.252655 GCCATTTTTGCGAATAAGAAATACGT 59.747 34.615 0.00 0.00 0.00 3.57
1770 3662 7.201401 GCCATTTTTGCGAATAAGAAATACGTT 60.201 33.333 0.00 0.00 0.00 3.99
1771 3663 8.101510 CCATTTTTGCGAATAAGAAATACGTTG 58.898 33.333 0.00 0.00 0.00 4.10
1772 3664 8.635124 CATTTTTGCGAATAAGAAATACGTTGT 58.365 29.630 0.00 0.00 0.00 3.32
1773 3665 9.828852 ATTTTTGCGAATAAGAAATACGTTGTA 57.171 25.926 0.00 0.00 0.00 2.41
1774 3666 8.644264 TTTTGCGAATAAGAAATACGTTGTAC 57.356 30.769 0.00 0.00 0.00 2.90
1775 3667 7.585286 TTGCGAATAAGAAATACGTTGTACT 57.415 32.000 0.00 0.00 0.00 2.73
1776 3668 7.585286 TGCGAATAAGAAATACGTTGTACTT 57.415 32.000 0.00 0.00 0.00 2.24
1777 3669 8.686397 TGCGAATAAGAAATACGTTGTACTTA 57.314 30.769 0.00 0.33 0.00 2.24
1778 3670 9.138062 TGCGAATAAGAAATACGTTGTACTTAA 57.862 29.630 0.00 0.00 0.00 1.85
1844 3736 9.865321 ATCAAATAAACACAGGATCAATTTCTG 57.135 29.630 0.00 0.00 34.91 3.02
1845 3737 9.076781 TCAAATAAACACAGGATCAATTTCTGA 57.923 29.630 3.31 0.00 38.81 3.27
1858 3750 7.169813 GGATCAATTTCTGAAAGTGGTTTTGTC 59.830 37.037 24.82 14.89 37.67 3.18
1860 3752 7.610865 TCAATTTCTGAAAGTGGTTTTGTCTT 58.389 30.769 24.82 1.92 37.11 3.01
1872 3764 7.110155 AGTGGTTTTGTCTTCTAGAACTTTCA 58.890 34.615 0.00 0.00 0.00 2.69
1873 3765 7.281100 AGTGGTTTTGTCTTCTAGAACTTTCAG 59.719 37.037 0.00 0.00 0.00 3.02
1880 3776 9.449719 TTGTCTTCTAGAACTTTCAGAAAAAGT 57.550 29.630 0.00 0.00 41.82 2.66
1882 3778 9.099454 GTCTTCTAGAACTTTCAGAAAAAGTGA 57.901 33.333 0.00 0.00 40.10 3.41
1890 3786 7.818493 ACTTTCAGAAAAAGTGAAGAAAAGC 57.182 32.000 2.55 0.00 38.88 3.51
1894 3790 6.099341 TCAGAAAAAGTGAAGAAAAGCCAAC 58.901 36.000 0.00 0.00 0.00 3.77
1895 3791 5.291858 CAGAAAAAGTGAAGAAAAGCCAACC 59.708 40.000 0.00 0.00 0.00 3.77
1896 3792 5.187772 AGAAAAAGTGAAGAAAAGCCAACCT 59.812 36.000 0.00 0.00 0.00 3.50
1897 3793 5.420725 AAAAGTGAAGAAAAGCCAACCTT 57.579 34.783 0.00 0.00 34.51 3.50
1933 3829 1.681264 ACAAAGTTGTACCAAGGCTGC 59.319 47.619 0.00 0.00 40.16 5.25
1934 3830 1.000274 CAAAGTTGTACCAAGGCTGCC 60.000 52.381 11.65 11.65 0.00 4.85
1935 3831 0.184933 AAGTTGTACCAAGGCTGCCA 59.815 50.000 22.65 0.00 0.00 4.92
1936 3832 0.405585 AGTTGTACCAAGGCTGCCAT 59.594 50.000 22.65 5.87 0.00 4.40
1937 3833 1.633432 AGTTGTACCAAGGCTGCCATA 59.367 47.619 22.65 4.68 0.00 2.74
1938 3834 2.041081 AGTTGTACCAAGGCTGCCATAA 59.959 45.455 22.65 0.93 0.00 1.90
1939 3835 3.023832 GTTGTACCAAGGCTGCCATAAT 58.976 45.455 22.65 6.11 0.00 1.28
1940 3836 3.380471 TGTACCAAGGCTGCCATAATT 57.620 42.857 22.65 2.88 0.00 1.40
1941 3837 4.511786 TGTACCAAGGCTGCCATAATTA 57.488 40.909 22.65 2.21 0.00 1.40
1942 3838 4.861196 TGTACCAAGGCTGCCATAATTAA 58.139 39.130 22.65 0.00 0.00 1.40
1943 3839 5.454062 TGTACCAAGGCTGCCATAATTAAT 58.546 37.500 22.65 0.00 0.00 1.40
1944 3840 5.896678 TGTACCAAGGCTGCCATAATTAATT 59.103 36.000 22.65 5.89 0.00 1.40
1945 3841 5.955961 ACCAAGGCTGCCATAATTAATTT 57.044 34.783 22.65 0.00 0.00 1.82
1946 3842 5.673514 ACCAAGGCTGCCATAATTAATTTG 58.326 37.500 22.65 12.46 0.00 2.32
1947 3843 5.058490 CCAAGGCTGCCATAATTAATTTGG 58.942 41.667 22.65 17.44 0.00 3.28
1948 3844 5.163322 CCAAGGCTGCCATAATTAATTTGGA 60.163 40.000 22.65 12.77 34.70 3.53
1949 3845 6.464749 CCAAGGCTGCCATAATTAATTTGGAT 60.465 38.462 22.65 5.25 34.70 3.41
1950 3846 6.350629 AGGCTGCCATAATTAATTTGGATC 57.649 37.500 22.65 14.33 31.94 3.36
1951 3847 5.047802 AGGCTGCCATAATTAATTTGGATCG 60.048 40.000 22.65 14.67 31.94 3.69
1952 3848 5.163513 GCTGCCATAATTAATTTGGATCGG 58.836 41.667 22.83 15.58 31.94 4.18
1953 3849 5.048083 GCTGCCATAATTAATTTGGATCGGA 60.048 40.000 22.83 2.39 31.94 4.55
1954 3850 6.573664 TGCCATAATTAATTTGGATCGGAG 57.426 37.500 22.83 5.54 31.94 4.63
1955 3851 5.476599 TGCCATAATTAATTTGGATCGGAGG 59.523 40.000 22.83 6.45 31.94 4.30
1956 3852 5.105756 GCCATAATTAATTTGGATCGGAGGG 60.106 44.000 22.83 10.15 31.94 4.30
1957 3853 6.245408 CCATAATTAATTTGGATCGGAGGGA 58.755 40.000 17.58 0.00 31.94 4.20
1958 3854 6.375455 CCATAATTAATTTGGATCGGAGGGAG 59.625 42.308 17.58 0.00 31.94 4.30
1959 3855 5.388599 AATTAATTTGGATCGGAGGGAGT 57.611 39.130 0.00 0.00 0.00 3.85
1960 3856 6.509523 AATTAATTTGGATCGGAGGGAGTA 57.490 37.500 0.00 0.00 0.00 2.59
1961 3857 5.546621 TTAATTTGGATCGGAGGGAGTAG 57.453 43.478 0.00 0.00 0.00 2.57
1962 3858 2.544844 TTTGGATCGGAGGGAGTAGT 57.455 50.000 0.00 0.00 0.00 2.73
1963 3859 3.675348 TTTGGATCGGAGGGAGTAGTA 57.325 47.619 0.00 0.00 0.00 1.82
1964 3860 3.675348 TTGGATCGGAGGGAGTAGTAA 57.325 47.619 0.00 0.00 0.00 2.24
1965 3861 3.675348 TGGATCGGAGGGAGTAGTAAA 57.325 47.619 0.00 0.00 0.00 2.01
1966 3862 3.985127 TGGATCGGAGGGAGTAGTAAAA 58.015 45.455 0.00 0.00 0.00 1.52
1967 3863 4.355549 TGGATCGGAGGGAGTAGTAAAAA 58.644 43.478 0.00 0.00 0.00 1.94
1968 3864 4.161001 TGGATCGGAGGGAGTAGTAAAAAC 59.839 45.833 0.00 0.00 0.00 2.43
1969 3865 4.442612 GGATCGGAGGGAGTAGTAAAAACC 60.443 50.000 0.00 0.00 0.00 3.27
1970 3866 2.833943 TCGGAGGGAGTAGTAAAAACCC 59.166 50.000 0.00 0.00 40.71 4.11
1971 3867 2.568509 CGGAGGGAGTAGTAAAAACCCA 59.431 50.000 0.00 0.00 42.62 4.51
1972 3868 3.199289 CGGAGGGAGTAGTAAAAACCCAT 59.801 47.826 0.00 0.00 42.62 4.00
1973 3869 4.324022 CGGAGGGAGTAGTAAAAACCCATT 60.324 45.833 0.00 0.00 42.62 3.16
1974 3870 5.577100 GGAGGGAGTAGTAAAAACCCATTT 58.423 41.667 0.00 0.00 42.62 2.32
1975 3871 6.014647 GGAGGGAGTAGTAAAAACCCATTTT 58.985 40.000 0.00 0.00 43.52 1.82
1976 3872 7.177184 GGAGGGAGTAGTAAAAACCCATTTTA 58.823 38.462 0.00 0.00 41.42 1.52
1977 3873 7.837689 GGAGGGAGTAGTAAAAACCCATTTTAT 59.162 37.037 0.00 0.00 43.43 1.40
1978 3874 8.589701 AGGGAGTAGTAAAAACCCATTTTATG 57.410 34.615 0.00 0.00 43.43 1.90
1979 3875 7.123697 AGGGAGTAGTAAAAACCCATTTTATGC 59.876 37.037 0.00 0.00 43.43 3.14
1986 3882 9.218440 AGTAAAAACCCATTTTATGCAAGAATG 57.782 29.630 11.13 11.13 43.43 2.67
2004 3900 6.204852 AGAATGCTATGGAATGATAACCCA 57.795 37.500 0.00 0.00 0.00 4.51
2059 6778 8.492673 TGTATAAAGGTTGTTTGAGCATAGAG 57.507 34.615 0.00 0.00 0.00 2.43
2060 6779 4.773323 AAAGGTTGTTTGAGCATAGAGC 57.227 40.909 0.00 0.00 46.19 4.09
2071 6790 2.486951 GCATAGAGCACCTGCATTTG 57.513 50.000 0.00 0.00 45.16 2.32
2084 6807 6.662616 CACCTGCATTTGCTAATACTCATAC 58.337 40.000 3.94 0.00 42.66 2.39
2091 6814 9.057089 GCATTTGCTAATACTCATACTTTAGGT 57.943 33.333 0.00 0.00 38.21 3.08
2095 6818 7.210174 TGCTAATACTCATACTTTAGGTGCTG 58.790 38.462 0.00 0.00 0.00 4.41
2097 6820 7.926555 GCTAATACTCATACTTTAGGTGCTGAA 59.073 37.037 0.00 0.00 0.00 3.02
2099 6822 8.494016 AATACTCATACTTTAGGTGCTGAAAC 57.506 34.615 0.00 0.00 0.00 2.78
2101 6824 6.476378 ACTCATACTTTAGGTGCTGAAACAT 58.524 36.000 0.00 0.00 0.00 2.71
2102 6825 6.595716 ACTCATACTTTAGGTGCTGAAACATC 59.404 38.462 0.00 0.00 0.00 3.06
2104 6827 6.818644 TCATACTTTAGGTGCTGAAACATCTC 59.181 38.462 0.00 0.00 31.99 2.75
2105 6828 5.234466 ACTTTAGGTGCTGAAACATCTCT 57.766 39.130 0.00 0.00 31.99 3.10
2107 6830 6.769512 ACTTTAGGTGCTGAAACATCTCTAA 58.230 36.000 0.00 0.00 31.99 2.10
2108 6831 6.651225 ACTTTAGGTGCTGAAACATCTCTAAC 59.349 38.462 0.00 0.00 31.99 2.34
2109 6832 3.944087 AGGTGCTGAAACATCTCTAACC 58.056 45.455 0.00 0.00 0.00 2.85
2110 6833 2.673368 GGTGCTGAAACATCTCTAACCG 59.327 50.000 0.00 0.00 0.00 4.44
2111 6834 3.585862 GTGCTGAAACATCTCTAACCGA 58.414 45.455 0.00 0.00 0.00 4.69
2112 6835 4.184629 GTGCTGAAACATCTCTAACCGAT 58.815 43.478 0.00 0.00 0.00 4.18
2113 6836 4.268884 GTGCTGAAACATCTCTAACCGATC 59.731 45.833 0.00 0.00 0.00 3.69
2114 6837 3.804873 GCTGAAACATCTCTAACCGATCC 59.195 47.826 0.00 0.00 0.00 3.36
2115 6838 4.372656 CTGAAACATCTCTAACCGATCCC 58.627 47.826 0.00 0.00 0.00 3.85
2116 6839 4.030913 TGAAACATCTCTAACCGATCCCT 58.969 43.478 0.00 0.00 0.00 4.20
2117 6840 5.205821 TGAAACATCTCTAACCGATCCCTA 58.794 41.667 0.00 0.00 0.00 3.53
2118 6841 5.659525 TGAAACATCTCTAACCGATCCCTAA 59.340 40.000 0.00 0.00 0.00 2.69
2119 6842 6.155565 TGAAACATCTCTAACCGATCCCTAAA 59.844 38.462 0.00 0.00 0.00 1.85
2120 6843 6.555463 AACATCTCTAACCGATCCCTAAAA 57.445 37.500 0.00 0.00 0.00 1.52
2121 6844 6.555463 ACATCTCTAACCGATCCCTAAAAA 57.445 37.500 0.00 0.00 0.00 1.94
2157 6880 4.823790 TTTTCTTTTCGCTAGGAACCAC 57.176 40.909 0.00 0.00 33.42 4.16
2158 6881 3.478857 TTCTTTTCGCTAGGAACCACA 57.521 42.857 0.00 0.00 33.42 4.17
2159 6882 2.762745 TCTTTTCGCTAGGAACCACAC 58.237 47.619 0.00 0.00 33.42 3.82
2160 6883 2.367567 TCTTTTCGCTAGGAACCACACT 59.632 45.455 0.00 0.00 33.42 3.55
2161 6884 2.922740 TTTCGCTAGGAACCACACTT 57.077 45.000 0.00 0.00 33.42 3.16
2162 6885 2.922740 TTCGCTAGGAACCACACTTT 57.077 45.000 0.00 0.00 0.00 2.66
2163 6886 2.922740 TCGCTAGGAACCACACTTTT 57.077 45.000 0.00 0.00 0.00 2.27
2164 6887 2.762745 TCGCTAGGAACCACACTTTTC 58.237 47.619 0.00 0.00 0.00 2.29
2165 6888 2.367567 TCGCTAGGAACCACACTTTTCT 59.632 45.455 0.00 0.00 0.00 2.52
2166 6889 3.575256 TCGCTAGGAACCACACTTTTCTA 59.425 43.478 0.00 0.00 0.00 2.10
2167 6890 3.927142 CGCTAGGAACCACACTTTTCTAG 59.073 47.826 0.00 0.00 0.00 2.43
2168 6891 4.321750 CGCTAGGAACCACACTTTTCTAGA 60.322 45.833 2.17 0.00 0.00 2.43
2169 6892 5.172205 GCTAGGAACCACACTTTTCTAGAG 58.828 45.833 2.17 0.00 0.00 2.43
2170 6893 4.625607 AGGAACCACACTTTTCTAGAGG 57.374 45.455 0.00 0.00 0.00 3.69
2171 6894 4.232091 AGGAACCACACTTTTCTAGAGGA 58.768 43.478 0.00 0.00 0.00 3.71
2172 6895 4.284746 AGGAACCACACTTTTCTAGAGGAG 59.715 45.833 0.00 0.00 0.00 3.69
2173 6896 3.686916 ACCACACTTTTCTAGAGGAGC 57.313 47.619 0.00 0.00 0.00 4.70
2174 6897 2.972713 ACCACACTTTTCTAGAGGAGCA 59.027 45.455 0.00 0.00 0.00 4.26
2175 6898 3.391296 ACCACACTTTTCTAGAGGAGCAA 59.609 43.478 0.00 0.00 0.00 3.91
2176 6899 4.141482 ACCACACTTTTCTAGAGGAGCAAA 60.141 41.667 0.00 0.00 0.00 3.68
2177 6900 5.006386 CCACACTTTTCTAGAGGAGCAAAT 58.994 41.667 0.00 0.00 0.00 2.32
2178 6901 6.173339 CCACACTTTTCTAGAGGAGCAAATA 58.827 40.000 0.00 0.00 0.00 1.40
2179 6902 6.825721 CCACACTTTTCTAGAGGAGCAAATAT 59.174 38.462 0.00 0.00 0.00 1.28
2180 6903 7.987458 CCACACTTTTCTAGAGGAGCAAATATA 59.013 37.037 0.00 0.00 0.00 0.86
2181 6904 9.383519 CACACTTTTCTAGAGGAGCAAATATAA 57.616 33.333 0.00 0.00 0.00 0.98
2182 6905 9.606631 ACACTTTTCTAGAGGAGCAAATATAAG 57.393 33.333 0.00 0.00 0.00 1.73
2183 6906 9.050601 CACTTTTCTAGAGGAGCAAATATAAGG 57.949 37.037 0.00 0.00 0.00 2.69
2184 6907 8.993424 ACTTTTCTAGAGGAGCAAATATAAGGA 58.007 33.333 0.00 0.00 0.00 3.36
2185 6908 9.487790 CTTTTCTAGAGGAGCAAATATAAGGAG 57.512 37.037 0.00 0.00 0.00 3.69
2186 6909 8.554490 TTTCTAGAGGAGCAAATATAAGGAGT 57.446 34.615 0.00 0.00 0.00 3.85
2187 6910 8.554490 TTCTAGAGGAGCAAATATAAGGAGTT 57.446 34.615 0.00 0.00 0.00 3.01
2188 6911 9.656323 TTCTAGAGGAGCAAATATAAGGAGTTA 57.344 33.333 0.00 0.00 0.00 2.24
2189 6912 9.656323 TCTAGAGGAGCAAATATAAGGAGTTAA 57.344 33.333 0.00 0.00 0.00 2.01
2192 6915 8.214364 AGAGGAGCAAATATAAGGAGTTAAAGG 58.786 37.037 0.00 0.00 0.00 3.11
2193 6916 8.102484 AGGAGCAAATATAAGGAGTTAAAGGA 57.898 34.615 0.00 0.00 0.00 3.36
2194 6917 8.728098 AGGAGCAAATATAAGGAGTTAAAGGAT 58.272 33.333 0.00 0.00 0.00 3.24
2201 6924 6.689663 ATAAGGAGTTAAAGGATAGGAGCC 57.310 41.667 0.00 0.00 0.00 4.70
2202 6925 3.319220 AGGAGTTAAAGGATAGGAGCCC 58.681 50.000 0.00 0.00 0.00 5.19
2203 6926 3.046374 GGAGTTAAAGGATAGGAGCCCA 58.954 50.000 0.00 0.00 0.00 5.36
2204 6927 3.653352 GGAGTTAAAGGATAGGAGCCCAT 59.347 47.826 0.00 0.00 0.00 4.00
2205 6928 4.844655 GGAGTTAAAGGATAGGAGCCCATA 59.155 45.833 0.00 0.00 0.00 2.74
2206 6929 5.489278 GGAGTTAAAGGATAGGAGCCCATAT 59.511 44.000 0.00 0.00 0.00 1.78
2207 6930 6.672657 GGAGTTAAAGGATAGGAGCCCATATA 59.327 42.308 0.00 0.00 0.00 0.86
2208 6931 7.348537 GGAGTTAAAGGATAGGAGCCCATATAT 59.651 40.741 0.00 0.00 0.00 0.86
2209 6932 9.435570 GAGTTAAAGGATAGGAGCCCATATATA 57.564 37.037 0.00 0.00 0.00 0.86
2210 6933 9.975464 AGTTAAAGGATAGGAGCCCATATATAT 57.025 33.333 0.00 0.00 0.00 0.86
2213 6936 8.980832 AAAGGATAGGAGCCCATATATATAGG 57.019 38.462 3.01 3.01 0.00 2.57
2214 6937 7.062584 AGGATAGGAGCCCATATATATAGGG 57.937 44.000 15.23 15.23 45.68 3.53
2222 6945 5.763876 CCCATATATATAGGGGCCTAAGC 57.236 47.826 25.54 0.00 46.10 3.09
2223 6946 5.415961 CCCATATATATAGGGGCCTAAGCT 58.584 45.833 25.54 0.00 46.10 3.74
2224 6947 6.571624 CCCATATATATAGGGGCCTAAGCTA 58.428 44.000 25.54 0.00 46.10 3.32
2225 6948 7.199765 CCCATATATATAGGGGCCTAAGCTAT 58.800 42.308 25.54 4.32 46.10 2.97
2226 6949 8.352181 CCCATATATATAGGGGCCTAAGCTATA 58.648 40.741 25.54 6.60 46.10 1.31
2227 6950 9.784376 CCATATATATAGGGGCCTAAGCTATAA 57.216 37.037 14.51 0.00 39.73 0.98
2230 6953 8.686739 ATATATAGGGGCCTAAGCTATAATGG 57.313 38.462 0.84 0.00 39.73 3.16
2231 6954 3.291626 AGGGGCCTAAGCTATAATGGA 57.708 47.619 0.84 0.00 39.73 3.41
2232 6955 3.820416 AGGGGCCTAAGCTATAATGGAT 58.180 45.455 0.84 0.00 39.73 3.41
2233 6956 3.783082 AGGGGCCTAAGCTATAATGGATC 59.217 47.826 0.84 0.00 39.73 3.36
2234 6957 3.432326 GGGGCCTAAGCTATAATGGATCG 60.432 52.174 0.84 0.00 39.73 3.69
2235 6958 3.432326 GGGCCTAAGCTATAATGGATCGG 60.432 52.174 0.84 0.00 39.73 4.18
2236 6959 3.197983 GGCCTAAGCTATAATGGATCGGT 59.802 47.826 0.00 0.00 39.73 4.69
2237 6960 4.323562 GGCCTAAGCTATAATGGATCGGTT 60.324 45.833 0.00 0.00 39.73 4.44
2238 6961 5.105064 GGCCTAAGCTATAATGGATCGGTTA 60.105 44.000 0.00 0.00 39.73 2.85
2239 6962 6.043411 GCCTAAGCTATAATGGATCGGTTAG 58.957 44.000 0.00 0.00 39.37 2.34
2240 6963 6.127423 GCCTAAGCTATAATGGATCGGTTAGA 60.127 42.308 12.28 0.87 40.89 2.10
2241 6964 7.484975 CCTAAGCTATAATGGATCGGTTAGAG 58.515 42.308 12.28 9.30 40.89 2.43
2242 6965 5.923733 AGCTATAATGGATCGGTTAGAGG 57.076 43.478 10.48 0.20 0.00 3.69
2243 6966 5.334421 AGCTATAATGGATCGGTTAGAGGT 58.666 41.667 8.40 8.40 0.00 3.85
2244 6967 5.186021 AGCTATAATGGATCGGTTAGAGGTG 59.814 44.000 11.72 0.00 31.15 4.00
2245 6968 2.622064 AATGGATCGGTTAGAGGTGC 57.378 50.000 0.00 0.00 0.00 5.01
2246 6969 1.794714 ATGGATCGGTTAGAGGTGCT 58.205 50.000 0.00 0.00 0.00 4.40
2247 6970 1.112113 TGGATCGGTTAGAGGTGCTC 58.888 55.000 0.00 0.00 0.00 4.26
2248 6971 1.342076 TGGATCGGTTAGAGGTGCTCT 60.342 52.381 0.00 0.00 43.83 4.09
2249 6972 2.092049 TGGATCGGTTAGAGGTGCTCTA 60.092 50.000 0.00 0.00 41.50 2.43
2250 6973 2.957006 GGATCGGTTAGAGGTGCTCTAA 59.043 50.000 0.00 0.00 46.70 2.10
2256 6979 2.828661 TAGAGGTGCTCTAAGGCTGA 57.171 50.000 0.00 0.00 39.74 4.26
2257 6980 1.944177 AGAGGTGCTCTAAGGCTGAA 58.056 50.000 0.00 0.00 39.28 3.02
2258 6981 1.552792 AGAGGTGCTCTAAGGCTGAAC 59.447 52.381 0.00 0.00 39.28 3.18
2259 6982 0.247736 AGGTGCTCTAAGGCTGAACG 59.752 55.000 0.00 0.00 0.00 3.95
2260 6983 0.741221 GGTGCTCTAAGGCTGAACGG 60.741 60.000 0.00 0.00 0.00 4.44
2271 6994 5.874895 AAGGCTGAACGGTAAGTTTTATC 57.125 39.130 0.00 0.00 44.35 1.75
2278 7001 6.942976 TGAACGGTAAGTTTTATCTCTCCAT 58.057 36.000 0.00 0.00 44.35 3.41
2336 7689 4.372656 GCAGTTAGCACCACCTATCTAAG 58.627 47.826 0.00 0.00 44.79 2.18
2444 7797 3.315749 TGGTAGTTTGTTTAGTTTGGCGG 59.684 43.478 0.00 0.00 0.00 6.13
2446 7799 4.514816 GGTAGTTTGTTTAGTTTGGCGGTA 59.485 41.667 0.00 0.00 0.00 4.02
2460 7813 2.440253 TGGCGGTATGGGCTAATTAAGT 59.560 45.455 0.00 0.00 0.00 2.24
2461 7814 3.647113 TGGCGGTATGGGCTAATTAAGTA 59.353 43.478 0.00 0.00 0.00 2.24
2462 7815 4.102838 TGGCGGTATGGGCTAATTAAGTAA 59.897 41.667 0.00 0.00 0.00 2.24
2463 7816 5.221966 TGGCGGTATGGGCTAATTAAGTAAT 60.222 40.000 0.00 0.00 0.00 1.89
2464 7817 5.708697 GGCGGTATGGGCTAATTAAGTAATT 59.291 40.000 2.11 2.11 39.14 1.40
2466 7819 7.555195 GGCGGTATGGGCTAATTAAGTAATTAT 59.445 37.037 4.41 0.00 37.47 1.28
2467 7820 8.953313 GCGGTATGGGCTAATTAAGTAATTATT 58.047 33.333 4.41 0.00 37.47 1.40
2484 7838 9.408648 AGTAATTATTAAGCTTGCCATACTGTT 57.591 29.630 9.86 1.87 0.00 3.16
2491 7845 2.749621 GCTTGCCATACTGTTGCTAAGT 59.250 45.455 0.00 0.00 0.00 2.24
2494 7848 5.277538 GCTTGCCATACTGTTGCTAAGTATC 60.278 44.000 4.25 0.00 38.50 2.24
2500 7854 7.095439 GCCATACTGTTGCTAAGTATCTTGATC 60.095 40.741 4.25 0.00 38.50 2.92
2506 7860 9.809096 CTGTTGCTAAGTATCTTGATCTTTCTA 57.191 33.333 0.00 0.00 0.00 2.10
2520 7889 6.479006 TGATCTTTCTATATCCCATTGGCAG 58.521 40.000 0.00 0.00 0.00 4.85
2524 7893 2.040278 TCTATATCCCATTGGCAGTGGC 59.960 50.000 22.55 10.30 35.35 5.01
2528 7897 3.818787 CCATTGGCAGTGGCGCTC 61.819 66.667 16.56 0.45 42.47 5.03
2548 7917 5.003804 GCTCCACAATTTTTCTCACCTCTA 58.996 41.667 0.00 0.00 0.00 2.43
2551 7920 4.154195 CCACAATTTTTCTCACCTCTACCG 59.846 45.833 0.00 0.00 0.00 4.02
2554 7923 4.618920 ATTTTTCTCACCTCTACCGTGT 57.381 40.909 0.00 0.00 32.86 4.49
2558 7936 2.983229 TCTCACCTCTACCGTGTACTC 58.017 52.381 0.00 0.00 32.86 2.59
2578 7956 8.197439 TGTACTCAACACATAGGAATACAGATG 58.803 37.037 0.00 0.00 31.43 2.90
2580 7958 5.988287 TCAACACATAGGAATACAGATGCA 58.012 37.500 0.00 0.00 0.00 3.96
2581 7959 6.594744 TCAACACATAGGAATACAGATGCAT 58.405 36.000 0.00 0.00 0.00 3.96
2583 7961 8.210265 TCAACACATAGGAATACAGATGCATTA 58.790 33.333 0.00 0.00 0.00 1.90
2584 7962 7.969536 ACACATAGGAATACAGATGCATTAC 57.030 36.000 0.00 0.00 0.00 1.89
2586 7964 7.442364 ACACATAGGAATACAGATGCATTACAC 59.558 37.037 0.00 0.00 0.00 2.90
2587 7965 7.442062 CACATAGGAATACAGATGCATTACACA 59.558 37.037 0.00 0.00 0.00 3.72
2588 7966 8.159447 ACATAGGAATACAGATGCATTACACAT 58.841 33.333 0.00 0.00 0.00 3.21
2667 8060 9.178758 GAAGTGTTTTAATATTGATGAGGGTCT 57.821 33.333 0.00 0.00 0.00 3.85
2668 8061 9.533831 AAGTGTTTTAATATTGATGAGGGTCTT 57.466 29.630 0.00 0.00 0.00 3.01
2773 9651 5.550290 TGTCAGCACATTTAGAAGTGATCA 58.450 37.500 0.00 0.00 37.97 2.92
2818 9701 0.544357 ATCAGAGACGGTCCCACCAA 60.544 55.000 4.14 0.00 38.47 3.67
2844 9727 4.409218 TCCGGCAGCGTGTCGTAC 62.409 66.667 0.00 0.00 45.14 3.67
2897 10019 4.201744 ACGTTCAAAGTTTGTTGTACCGAG 60.202 41.667 15.08 1.83 0.00 4.63
2909 10031 0.388134 GTACCGAGCGACACACACAT 60.388 55.000 0.00 0.00 0.00 3.21
2938 10065 2.405025 GCGTGTGCTGTTGCTTTAATTC 59.595 45.455 0.00 0.00 40.48 2.17
2940 10067 3.665409 CGTGTGCTGTTGCTTTAATTCTG 59.335 43.478 0.00 0.00 40.48 3.02
3154 10285 1.219935 GGTCTCCCACGGCGTTAAT 59.780 57.895 11.19 0.00 0.00 1.40
3172 10303 4.394712 GTGCCACCCTCCTCACCG 62.395 72.222 0.00 0.00 0.00 4.94
3256 10387 2.730672 CTTCAAGTCGGCCTTCGCG 61.731 63.158 0.00 0.00 39.05 5.87
3322 10453 2.847715 GTGCCCCTATACCCGCCT 60.848 66.667 0.00 0.00 0.00 5.52
3323 10454 2.525877 TGCCCCTATACCCGCCTC 60.526 66.667 0.00 0.00 0.00 4.70
3759 10890 8.358148 ACAAGATATACTAAACCGACATACAGG 58.642 37.037 0.00 0.00 0.00 4.00
3760 10891 6.921914 AGATATACTAAACCGACATACAGGC 58.078 40.000 0.00 0.00 0.00 4.85
3761 10892 6.720288 AGATATACTAAACCGACATACAGGCT 59.280 38.462 0.00 0.00 0.00 4.58
3762 10893 3.247006 ACTAAACCGACATACAGGCTG 57.753 47.619 14.16 14.16 0.00 4.85
3763 10894 2.093658 ACTAAACCGACATACAGGCTGG 60.094 50.000 20.34 3.36 0.00 4.85
3764 10895 0.676782 AAACCGACATACAGGCTGGC 60.677 55.000 20.34 0.00 0.00 4.85
3765 10896 1.553690 AACCGACATACAGGCTGGCT 61.554 55.000 20.34 0.00 0.00 4.75
3766 10897 1.522355 CCGACATACAGGCTGGCTG 60.522 63.158 27.32 27.32 0.00 4.85
3767 10898 2.176273 CGACATACAGGCTGGCTGC 61.176 63.158 28.61 12.59 41.94 5.25
3768 10899 2.124983 ACATACAGGCTGGCTGCG 60.125 61.111 28.61 19.73 44.05 5.18
3769 10900 2.187685 CATACAGGCTGGCTGCGA 59.812 61.111 28.61 18.31 44.05 5.10
3770 10901 1.227764 CATACAGGCTGGCTGCGAT 60.228 57.895 28.61 19.63 44.05 4.58
3771 10902 1.070445 ATACAGGCTGGCTGCGATC 59.930 57.895 28.61 0.00 44.05 3.69
3772 10903 2.388890 ATACAGGCTGGCTGCGATCC 62.389 60.000 28.61 0.00 44.05 3.36
3773 10904 4.478371 CAGGCTGGCTGCGATCCA 62.478 66.667 18.65 0.00 44.05 3.41
3783 10914 3.838271 GCGATCCAGCGTCTCCCA 61.838 66.667 0.00 0.00 0.00 4.37
3784 10915 2.892640 CGATCCAGCGTCTCCCAA 59.107 61.111 0.00 0.00 0.00 4.12
3977 11108 3.741325 CCCTCGAACTGGGGGATT 58.259 61.111 0.26 0.00 42.58 3.01
3978 11109 2.925078 CCCTCGAACTGGGGGATTA 58.075 57.895 0.26 0.00 42.58 1.75
3980 11111 1.691482 CCCTCGAACTGGGGGATTAGA 60.691 57.143 0.26 0.00 42.58 2.10
3988 11119 0.328450 TGGGGGATTAGATGGTGGCT 60.328 55.000 0.00 0.00 0.00 4.75
4036 11167 3.142393 CCGGGCTATGAGGTGGAG 58.858 66.667 0.00 0.00 0.00 3.86
4275 11447 1.592669 GATCGAGTGATGGCGGTGG 60.593 63.158 0.00 0.00 34.09 4.61
4293 11465 2.093869 GTGGTTTAGCGTCATAGTCCCA 60.094 50.000 0.00 0.00 0.00 4.37
4319 11492 2.698274 AGGGCATCGTTTTTGGAGTTTT 59.302 40.909 0.00 0.00 0.00 2.43
4350 11523 4.681978 GACCAGTGACGCCGGCTT 62.682 66.667 26.68 17.09 0.00 4.35
4385 11558 1.333702 GCGCGATTGCCGATGAAAATA 60.334 47.619 12.10 0.00 41.76 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 7.312154 TCCATTTTGATGACAAGTATTTTCGG 58.688 34.615 0.00 0.00 37.32 4.30
12 13 8.748412 CCCTTTTATCCATTTTGATGACAAGTA 58.252 33.333 0.00 0.00 37.32 2.24
13 14 7.310609 CCCCTTTTATCCATTTTGATGACAAGT 60.311 37.037 0.00 0.00 37.32 3.16
14 15 7.043565 CCCCTTTTATCCATTTTGATGACAAG 58.956 38.462 0.00 0.00 37.32 3.16
15 16 6.728164 TCCCCTTTTATCCATTTTGATGACAA 59.272 34.615 0.00 0.00 0.00 3.18
16 17 6.259893 TCCCCTTTTATCCATTTTGATGACA 58.740 36.000 0.00 0.00 0.00 3.58
17 18 6.790232 TCCCCTTTTATCCATTTTGATGAC 57.210 37.500 0.00 0.00 0.00 3.06
18 19 6.183360 GCATCCCCTTTTATCCATTTTGATGA 60.183 38.462 0.00 0.00 0.00 2.92
19 20 5.993441 GCATCCCCTTTTATCCATTTTGATG 59.007 40.000 0.00 0.00 0.00 3.07
20 21 5.666718 TGCATCCCCTTTTATCCATTTTGAT 59.333 36.000 0.00 0.00 0.00 2.57
21 22 5.028802 TGCATCCCCTTTTATCCATTTTGA 58.971 37.500 0.00 0.00 0.00 2.69
22 23 5.356291 TGCATCCCCTTTTATCCATTTTG 57.644 39.130 0.00 0.00 0.00 2.44
23 24 5.907079 AGATGCATCCCCTTTTATCCATTTT 59.093 36.000 23.06 0.00 0.00 1.82
24 25 5.470501 AGATGCATCCCCTTTTATCCATTT 58.529 37.500 23.06 0.00 0.00 2.32
25 26 5.083953 AGATGCATCCCCTTTTATCCATT 57.916 39.130 23.06 0.00 0.00 3.16
26 27 4.754411 AGATGCATCCCCTTTTATCCAT 57.246 40.909 23.06 0.00 0.00 3.41
27 28 4.913355 TCTAGATGCATCCCCTTTTATCCA 59.087 41.667 23.06 0.00 0.00 3.41
28 29 5.221925 TGTCTAGATGCATCCCCTTTTATCC 60.222 44.000 23.06 2.63 0.00 2.59
29 30 5.869579 TGTCTAGATGCATCCCCTTTTATC 58.130 41.667 23.06 5.36 0.00 1.75
30 31 5.912149 TGTCTAGATGCATCCCCTTTTAT 57.088 39.130 23.06 4.58 0.00 1.40
31 32 5.912149 ATGTCTAGATGCATCCCCTTTTA 57.088 39.130 23.06 6.97 0.00 1.52
32 33 4.803329 ATGTCTAGATGCATCCCCTTTT 57.197 40.909 23.06 6.10 0.00 2.27
33 34 6.460103 AATATGTCTAGATGCATCCCCTTT 57.540 37.500 23.06 6.85 0.00 3.11
34 35 6.460103 AAATATGTCTAGATGCATCCCCTT 57.540 37.500 23.06 7.24 0.00 3.95
35 36 6.460103 AAAATATGTCTAGATGCATCCCCT 57.540 37.500 23.06 7.62 0.00 4.79
36 37 7.398024 ACTAAAATATGTCTAGATGCATCCCC 58.602 38.462 23.06 9.04 0.00 4.81
37 38 8.854614 AACTAAAATATGTCTAGATGCATCCC 57.145 34.615 23.06 9.38 0.00 3.85
38 39 9.717942 AGAACTAAAATATGTCTAGATGCATCC 57.282 33.333 23.06 8.35 0.00 3.51
69 70 9.246670 TGTCATCAAAATGGATAAAAGAGATGT 57.753 29.630 0.00 0.00 33.83 3.06
72 73 9.300681 ACTTGTCATCAAAATGGATAAAAGAGA 57.699 29.630 0.00 0.00 33.42 3.10
80 81 7.975616 CCGAAAATACTTGTCATCAAAATGGAT 59.024 33.333 0.00 0.00 33.42 3.41
81 82 7.175816 TCCGAAAATACTTGTCATCAAAATGGA 59.824 33.333 0.00 0.00 33.42 3.41
82 83 7.273381 GTCCGAAAATACTTGTCATCAAAATGG 59.727 37.037 0.00 0.00 33.42 3.16
83 84 7.007367 CGTCCGAAAATACTTGTCATCAAAATG 59.993 37.037 0.00 0.00 32.87 2.32
84 85 7.021196 CGTCCGAAAATACTTGTCATCAAAAT 58.979 34.615 0.00 0.00 32.87 1.82
85 86 6.203145 TCGTCCGAAAATACTTGTCATCAAAA 59.797 34.615 0.00 0.00 32.87 2.44
86 87 5.697178 TCGTCCGAAAATACTTGTCATCAAA 59.303 36.000 0.00 0.00 32.87 2.69
87 88 5.231702 TCGTCCGAAAATACTTGTCATCAA 58.768 37.500 0.00 0.00 0.00 2.57
88 89 4.811908 TCGTCCGAAAATACTTGTCATCA 58.188 39.130 0.00 0.00 0.00 3.07
89 90 5.220416 CCTTCGTCCGAAAATACTTGTCATC 60.220 44.000 3.52 0.00 33.34 2.92
90 91 4.630069 CCTTCGTCCGAAAATACTTGTCAT 59.370 41.667 3.52 0.00 33.34 3.06
91 92 3.991773 CCTTCGTCCGAAAATACTTGTCA 59.008 43.478 3.52 0.00 33.34 3.58
92 93 3.370061 CCCTTCGTCCGAAAATACTTGTC 59.630 47.826 3.52 0.00 33.34 3.18
93 94 3.007182 TCCCTTCGTCCGAAAATACTTGT 59.993 43.478 3.52 0.00 33.34 3.16
94 95 3.592059 TCCCTTCGTCCGAAAATACTTG 58.408 45.455 3.52 0.00 33.34 3.16
95 96 3.260128 ACTCCCTTCGTCCGAAAATACTT 59.740 43.478 3.52 0.00 33.34 2.24
96 97 2.830321 ACTCCCTTCGTCCGAAAATACT 59.170 45.455 3.52 0.00 33.34 2.12
97 98 3.242549 ACTCCCTTCGTCCGAAAATAC 57.757 47.619 3.52 0.00 33.34 1.89
98 99 3.763360 TGTACTCCCTTCGTCCGAAAATA 59.237 43.478 3.52 0.00 33.34 1.40
99 100 2.564062 TGTACTCCCTTCGTCCGAAAAT 59.436 45.455 3.52 0.00 33.34 1.82
100 101 1.962807 TGTACTCCCTTCGTCCGAAAA 59.037 47.619 3.52 0.00 33.34 2.29
101 102 1.619654 TGTACTCCCTTCGTCCGAAA 58.380 50.000 3.52 0.00 33.34 3.46
102 103 1.619654 TTGTACTCCCTTCGTCCGAA 58.380 50.000 1.81 1.81 0.00 4.30
103 104 1.270550 GTTTGTACTCCCTTCGTCCGA 59.729 52.381 0.00 0.00 0.00 4.55
104 105 1.271656 AGTTTGTACTCCCTTCGTCCG 59.728 52.381 0.00 0.00 0.00 4.79
105 106 4.159135 TCATAGTTTGTACTCCCTTCGTCC 59.841 45.833 0.00 0.00 35.78 4.79
106 107 5.320549 TCATAGTTTGTACTCCCTTCGTC 57.679 43.478 0.00 0.00 35.78 4.20
107 108 5.934402 ATCATAGTTTGTACTCCCTTCGT 57.066 39.130 0.00 0.00 35.78 3.85
108 109 5.913514 CGTATCATAGTTTGTACTCCCTTCG 59.086 44.000 0.00 0.00 35.78 3.79
109 110 5.690857 GCGTATCATAGTTTGTACTCCCTTC 59.309 44.000 0.00 0.00 35.78 3.46
110 111 5.598769 GCGTATCATAGTTTGTACTCCCTT 58.401 41.667 0.00 0.00 35.78 3.95
111 112 4.261489 CGCGTATCATAGTTTGTACTCCCT 60.261 45.833 0.00 0.00 35.78 4.20
112 113 3.979495 CGCGTATCATAGTTTGTACTCCC 59.021 47.826 0.00 0.00 35.78 4.30
113 114 4.852138 TCGCGTATCATAGTTTGTACTCC 58.148 43.478 5.77 0.00 35.78 3.85
114 115 4.910456 CCTCGCGTATCATAGTTTGTACTC 59.090 45.833 5.77 0.00 35.78 2.59
115 116 4.792057 GCCTCGCGTATCATAGTTTGTACT 60.792 45.833 5.77 0.00 38.44 2.73
116 117 3.424529 GCCTCGCGTATCATAGTTTGTAC 59.575 47.826 5.77 0.00 0.00 2.90
117 118 3.067040 TGCCTCGCGTATCATAGTTTGTA 59.933 43.478 5.77 0.00 0.00 2.41
118 119 2.159156 TGCCTCGCGTATCATAGTTTGT 60.159 45.455 5.77 0.00 0.00 2.83
119 120 2.469826 TGCCTCGCGTATCATAGTTTG 58.530 47.619 5.77 0.00 0.00 2.93
120 121 2.882927 TGCCTCGCGTATCATAGTTT 57.117 45.000 5.77 0.00 0.00 2.66
121 122 3.367087 GGTATGCCTCGCGTATCATAGTT 60.367 47.826 5.77 0.00 32.03 2.24
122 123 2.163815 GGTATGCCTCGCGTATCATAGT 59.836 50.000 5.77 0.00 32.03 2.12
134 135 2.981859 TTCTTTCGAGGGTATGCCTC 57.018 50.000 0.00 0.00 34.45 4.70
137 138 3.945285 TGGATTTTCTTTCGAGGGTATGC 59.055 43.478 0.00 0.00 0.00 3.14
138 139 4.034048 CGTGGATTTTCTTTCGAGGGTATG 59.966 45.833 0.00 0.00 0.00 2.39
139 140 4.189231 CGTGGATTTTCTTTCGAGGGTAT 58.811 43.478 0.00 0.00 0.00 2.73
151 152 3.312697 GGGCATCTCTAACGTGGATTTTC 59.687 47.826 0.00 0.00 0.00 2.29
159 161 1.568504 TCAAGGGGCATCTCTAACGT 58.431 50.000 0.00 0.00 0.00 3.99
218 223 6.165577 AGGAAAATTCAAATGAACGAATGGG 58.834 36.000 0.00 0.00 36.80 4.00
223 228 4.517453 ACGGAGGAAAATTCAAATGAACGA 59.483 37.500 0.00 0.00 36.80 3.85
233 238 2.879026 GGATAGGCACGGAGGAAAATTC 59.121 50.000 0.00 0.00 0.00 2.17
263 268 1.695893 ATCGTGTTCTTCATGCGCCG 61.696 55.000 4.18 0.00 33.44 6.46
317 322 1.545582 CGGTGGTAGGTTTAAGACGGA 59.454 52.381 0.00 0.00 0.00 4.69
344 349 0.582005 GCGGTCCATCAAGTTATCGC 59.418 55.000 0.00 0.00 35.34 4.58
522 611 1.884075 CGGGTGACTGGTTGATCCGA 61.884 60.000 0.00 0.00 38.42 4.55
789 910 2.901839 GTCCTTGGACTACCACCTTGTA 59.098 50.000 12.20 0.00 46.80 2.41
794 915 1.906574 TGATGTCCTTGGACTACCACC 59.093 52.381 19.11 4.68 46.80 4.61
1563 2175 1.125093 ACACCGACAGGAACCCATGA 61.125 55.000 0.00 0.00 41.02 3.07
1623 3503 1.903294 GCTCACCTGATCTCTGGCA 59.097 57.895 3.26 0.00 38.38 4.92
1690 3574 0.239347 GCATGCTTGCTTGACTCGTT 59.761 50.000 16.80 0.00 45.77 3.85
1722 3614 7.538303 GGCACAACCAATTTAATTTCCATAG 57.462 36.000 0.00 0.00 38.86 2.23
1742 3634 5.837586 TTTCTTATTCGCAAAAATGGCAC 57.162 34.783 0.00 0.00 0.00 5.01
1743 3635 6.252441 CGTATTTCTTATTCGCAAAAATGGCA 59.748 34.615 0.00 0.00 0.00 4.92
1746 3638 8.635124 ACAACGTATTTCTTATTCGCAAAAATG 58.365 29.630 0.00 0.00 0.00 2.32
1747 3639 8.736751 ACAACGTATTTCTTATTCGCAAAAAT 57.263 26.923 0.00 0.00 0.00 1.82
1748 3640 9.105206 GTACAACGTATTTCTTATTCGCAAAAA 57.895 29.630 0.00 0.00 0.00 1.94
1750 3642 8.020861 AGTACAACGTATTTCTTATTCGCAAA 57.979 30.769 0.00 0.00 0.00 3.68
1751 3643 7.585286 AGTACAACGTATTTCTTATTCGCAA 57.415 32.000 0.00 0.00 0.00 4.85
1752 3644 7.585286 AAGTACAACGTATTTCTTATTCGCA 57.415 32.000 0.00 0.00 0.00 5.10
1811 3703 9.685276 TGATCCTGTGTTTATTTGATAATGTCT 57.315 29.630 0.00 0.00 0.00 3.41
1819 3711 9.076781 TCAGAAATTGATCCTGTGTTTATTTGA 57.923 29.630 0.00 0.00 0.00 2.69
1820 3712 9.695526 TTCAGAAATTGATCCTGTGTTTATTTG 57.304 29.630 0.00 0.00 35.27 2.32
1823 3715 9.082313 ACTTTCAGAAATTGATCCTGTGTTTAT 57.918 29.630 0.00 0.00 35.27 1.40
1824 3716 8.352201 CACTTTCAGAAATTGATCCTGTGTTTA 58.648 33.333 7.34 0.00 35.27 2.01
1826 3718 6.239120 CCACTTTCAGAAATTGATCCTGTGTT 60.239 38.462 13.49 0.00 35.27 3.32
1827 3719 5.242393 CCACTTTCAGAAATTGATCCTGTGT 59.758 40.000 13.49 0.00 35.27 3.72
1830 3722 5.972107 ACCACTTTCAGAAATTGATCCTG 57.028 39.130 13.49 1.17 35.27 3.86
1838 3730 7.410120 AGAAGACAAAACCACTTTCAGAAAT 57.590 32.000 0.00 0.00 0.00 2.17
1842 3734 7.281100 AGTTCTAGAAGACAAAACCACTTTCAG 59.719 37.037 5.12 0.00 0.00 3.02
1844 3736 7.555306 AGTTCTAGAAGACAAAACCACTTTC 57.445 36.000 5.12 0.00 0.00 2.62
1845 3737 7.939784 AAGTTCTAGAAGACAAAACCACTTT 57.060 32.000 5.12 0.00 0.00 2.66
1858 3750 9.928236 CTTCACTTTTTCTGAAAGTTCTAGAAG 57.072 33.333 5.12 9.33 38.32 2.85
1860 3752 9.667107 TTCTTCACTTTTTCTGAAAGTTCTAGA 57.333 29.630 2.75 0.00 38.32 2.43
1872 3764 5.187772 AGGTTGGCTTTTCTTCACTTTTTCT 59.812 36.000 0.00 0.00 0.00 2.52
1873 3765 5.419542 AGGTTGGCTTTTCTTCACTTTTTC 58.580 37.500 0.00 0.00 0.00 2.29
1920 3816 3.380471 AATTATGGCAGCCTTGGTACA 57.620 42.857 14.15 0.00 0.00 2.90
1921 3817 6.405278 AATTAATTATGGCAGCCTTGGTAC 57.595 37.500 14.15 0.00 0.00 3.34
1922 3818 6.183360 CCAAATTAATTATGGCAGCCTTGGTA 60.183 38.462 14.15 0.00 0.00 3.25
1923 3819 5.396660 CCAAATTAATTATGGCAGCCTTGGT 60.397 40.000 14.15 0.00 0.00 3.67
1924 3820 5.058490 CCAAATTAATTATGGCAGCCTTGG 58.942 41.667 14.15 10.80 0.00 3.61
1925 3821 5.916318 TCCAAATTAATTATGGCAGCCTTG 58.084 37.500 14.15 5.15 34.13 3.61
1926 3822 6.517194 CGATCCAAATTAATTATGGCAGCCTT 60.517 38.462 14.15 9.31 34.13 4.35
1927 3823 5.047802 CGATCCAAATTAATTATGGCAGCCT 60.048 40.000 14.15 0.35 34.13 4.58
1928 3824 5.163513 CGATCCAAATTAATTATGGCAGCC 58.836 41.667 3.66 3.66 34.13 4.85
1929 3825 5.048083 TCCGATCCAAATTAATTATGGCAGC 60.048 40.000 17.63 11.74 34.13 5.25
1930 3826 6.349611 CCTCCGATCCAAATTAATTATGGCAG 60.350 42.308 17.63 12.95 34.13 4.85
1931 3827 5.476599 CCTCCGATCCAAATTAATTATGGCA 59.523 40.000 17.63 0.00 34.13 4.92
1932 3828 5.105756 CCCTCCGATCCAAATTAATTATGGC 60.106 44.000 17.63 9.10 34.13 4.40
1933 3829 6.245408 TCCCTCCGATCCAAATTAATTATGG 58.755 40.000 16.87 16.87 35.49 2.74
1934 3830 6.942576 ACTCCCTCCGATCCAAATTAATTATG 59.057 38.462 0.01 2.78 0.00 1.90
1935 3831 7.091533 ACTCCCTCCGATCCAAATTAATTAT 57.908 36.000 0.01 0.00 0.00 1.28
1936 3832 6.509523 ACTCCCTCCGATCCAAATTAATTA 57.490 37.500 0.01 0.00 0.00 1.40
1937 3833 5.388599 ACTCCCTCCGATCCAAATTAATT 57.611 39.130 0.00 0.00 0.00 1.40
1938 3834 5.607171 ACTACTCCCTCCGATCCAAATTAAT 59.393 40.000 0.00 0.00 0.00 1.40
1939 3835 4.966805 ACTACTCCCTCCGATCCAAATTAA 59.033 41.667 0.00 0.00 0.00 1.40
1940 3836 4.553678 ACTACTCCCTCCGATCCAAATTA 58.446 43.478 0.00 0.00 0.00 1.40
1941 3837 3.385115 ACTACTCCCTCCGATCCAAATT 58.615 45.455 0.00 0.00 0.00 1.82
1942 3838 3.047695 ACTACTCCCTCCGATCCAAAT 57.952 47.619 0.00 0.00 0.00 2.32
1943 3839 2.544844 ACTACTCCCTCCGATCCAAA 57.455 50.000 0.00 0.00 0.00 3.28
1944 3840 3.675348 TTACTACTCCCTCCGATCCAA 57.325 47.619 0.00 0.00 0.00 3.53
1945 3841 3.675348 TTTACTACTCCCTCCGATCCA 57.325 47.619 0.00 0.00 0.00 3.41
1946 3842 4.442612 GGTTTTTACTACTCCCTCCGATCC 60.443 50.000 0.00 0.00 0.00 3.36
1947 3843 4.442612 GGGTTTTTACTACTCCCTCCGATC 60.443 50.000 0.00 0.00 35.63 3.69
1948 3844 3.453717 GGGTTTTTACTACTCCCTCCGAT 59.546 47.826 0.00 0.00 35.63 4.18
1949 3845 2.833943 GGGTTTTTACTACTCCCTCCGA 59.166 50.000 0.00 0.00 35.63 4.55
1950 3846 2.568509 TGGGTTTTTACTACTCCCTCCG 59.431 50.000 0.00 0.00 38.95 4.63
1951 3847 4.857130 ATGGGTTTTTACTACTCCCTCC 57.143 45.455 0.00 0.00 38.95 4.30
1952 3848 8.683615 CATAAAATGGGTTTTTACTACTCCCTC 58.316 37.037 0.00 0.00 41.37 4.30
1953 3849 7.123697 GCATAAAATGGGTTTTTACTACTCCCT 59.876 37.037 0.00 0.00 41.37 4.20
1954 3850 7.093684 TGCATAAAATGGGTTTTTACTACTCCC 60.094 37.037 0.00 0.00 41.37 4.30
1955 3851 7.832769 TGCATAAAATGGGTTTTTACTACTCC 58.167 34.615 0.00 0.00 41.37 3.85
1956 3852 9.353999 CTTGCATAAAATGGGTTTTTACTACTC 57.646 33.333 0.00 0.00 41.37 2.59
1957 3853 9.084533 TCTTGCATAAAATGGGTTTTTACTACT 57.915 29.630 0.00 0.00 41.37 2.57
1958 3854 9.699703 TTCTTGCATAAAATGGGTTTTTACTAC 57.300 29.630 0.00 0.00 41.37 2.73
1960 3856 9.218440 CATTCTTGCATAAAATGGGTTTTTACT 57.782 29.630 7.84 0.00 41.37 2.24
1979 3875 6.491062 TGGGTTATCATTCCATAGCATTCTTG 59.509 38.462 0.00 0.00 0.00 3.02
1986 3882 6.463995 TTTTGTGGGTTATCATTCCATAGC 57.536 37.500 0.00 0.00 32.71 2.97
2046 6765 1.399791 GCAGGTGCTCTATGCTCAAAC 59.600 52.381 8.59 0.00 43.37 2.93
2059 6778 3.378112 TGAGTATTAGCAAATGCAGGTGC 59.622 43.478 14.89 14.89 45.16 5.01
2060 6779 5.762825 ATGAGTATTAGCAAATGCAGGTG 57.237 39.130 8.28 0.00 45.16 4.00
2062 6781 7.502120 AAGTATGAGTATTAGCAAATGCAGG 57.498 36.000 8.28 0.00 45.16 4.85
2064 6783 9.056005 CCTAAAGTATGAGTATTAGCAAATGCA 57.944 33.333 8.28 0.00 45.16 3.96
2065 6784 9.057089 ACCTAAAGTATGAGTATTAGCAAATGC 57.943 33.333 0.00 0.00 42.49 3.56
2067 6786 9.057089 GCACCTAAAGTATGAGTATTAGCAAAT 57.943 33.333 0.00 0.00 0.00 2.32
2069 6788 7.710907 CAGCACCTAAAGTATGAGTATTAGCAA 59.289 37.037 0.00 0.00 0.00 3.91
2070 6789 7.069455 TCAGCACCTAAAGTATGAGTATTAGCA 59.931 37.037 0.00 0.00 0.00 3.49
2071 6790 7.434492 TCAGCACCTAAAGTATGAGTATTAGC 58.566 38.462 0.00 0.00 0.00 3.09
2075 6798 7.620880 TGTTTCAGCACCTAAAGTATGAGTAT 58.379 34.615 0.00 0.00 0.00 2.12
2076 6799 6.999950 TGTTTCAGCACCTAAAGTATGAGTA 58.000 36.000 0.00 0.00 0.00 2.59
2084 6807 6.092807 GGTTAGAGATGTTTCAGCACCTAAAG 59.907 42.308 0.00 0.00 0.00 1.85
2091 6814 3.953712 TCGGTTAGAGATGTTTCAGCA 57.046 42.857 0.00 0.00 0.00 4.41
2095 6818 4.674281 AGGGATCGGTTAGAGATGTTTC 57.326 45.455 0.00 0.00 0.00 2.78
2097 6820 6.555463 TTTTAGGGATCGGTTAGAGATGTT 57.445 37.500 0.00 0.00 0.00 2.71
2135 6858 4.641094 TGTGGTTCCTAGCGAAAAGAAAAA 59.359 37.500 0.00 0.00 30.39 1.94
2136 6859 4.035909 GTGTGGTTCCTAGCGAAAAGAAAA 59.964 41.667 0.00 0.00 30.39 2.29
2137 6860 3.562557 GTGTGGTTCCTAGCGAAAAGAAA 59.437 43.478 0.00 0.00 30.39 2.52
2138 6861 3.135994 GTGTGGTTCCTAGCGAAAAGAA 58.864 45.455 0.00 0.00 30.39 2.52
2139 6862 2.367567 AGTGTGGTTCCTAGCGAAAAGA 59.632 45.455 0.00 0.00 30.39 2.52
2140 6863 2.767505 AGTGTGGTTCCTAGCGAAAAG 58.232 47.619 0.00 0.00 30.39 2.27
2141 6864 2.922740 AGTGTGGTTCCTAGCGAAAA 57.077 45.000 0.00 0.00 30.39 2.29
2142 6865 2.922740 AAGTGTGGTTCCTAGCGAAA 57.077 45.000 0.00 0.00 30.39 3.46
2143 6866 2.922740 AAAGTGTGGTTCCTAGCGAA 57.077 45.000 0.00 0.00 0.00 4.70
2144 6867 2.367567 AGAAAAGTGTGGTTCCTAGCGA 59.632 45.455 0.00 0.00 0.00 4.93
2145 6868 2.767505 AGAAAAGTGTGGTTCCTAGCG 58.232 47.619 0.00 0.00 0.00 4.26
2146 6869 5.148651 TCTAGAAAAGTGTGGTTCCTAGC 57.851 43.478 0.00 0.00 0.00 3.42
2147 6870 5.480772 TCCTCTAGAAAAGTGTGGTTCCTAG 59.519 44.000 0.00 0.00 0.00 3.02
2148 6871 5.399991 TCCTCTAGAAAAGTGTGGTTCCTA 58.600 41.667 0.00 0.00 0.00 2.94
2149 6872 4.232091 TCCTCTAGAAAAGTGTGGTTCCT 58.768 43.478 0.00 0.00 0.00 3.36
2150 6873 4.570930 CTCCTCTAGAAAAGTGTGGTTCC 58.429 47.826 0.00 0.00 0.00 3.62
2151 6874 3.997681 GCTCCTCTAGAAAAGTGTGGTTC 59.002 47.826 0.00 0.00 0.00 3.62
2152 6875 3.391296 TGCTCCTCTAGAAAAGTGTGGTT 59.609 43.478 0.00 0.00 0.00 3.67
2153 6876 2.972713 TGCTCCTCTAGAAAAGTGTGGT 59.027 45.455 0.00 0.00 0.00 4.16
2154 6877 3.685139 TGCTCCTCTAGAAAAGTGTGG 57.315 47.619 0.00 0.00 0.00 4.17
2155 6878 7.856145 ATATTTGCTCCTCTAGAAAAGTGTG 57.144 36.000 0.00 0.00 36.12 3.82
2156 6879 9.606631 CTTATATTTGCTCCTCTAGAAAAGTGT 57.393 33.333 0.00 0.00 36.12 3.55
2157 6880 9.050601 CCTTATATTTGCTCCTCTAGAAAAGTG 57.949 37.037 0.00 0.00 36.12 3.16
2158 6881 8.993424 TCCTTATATTTGCTCCTCTAGAAAAGT 58.007 33.333 0.00 0.00 36.12 2.66
2159 6882 9.487790 CTCCTTATATTTGCTCCTCTAGAAAAG 57.512 37.037 0.00 0.00 36.12 2.27
2160 6883 8.993424 ACTCCTTATATTTGCTCCTCTAGAAAA 58.007 33.333 0.00 0.00 37.14 2.29
2161 6884 8.554490 ACTCCTTATATTTGCTCCTCTAGAAA 57.446 34.615 0.00 0.00 0.00 2.52
2162 6885 8.554490 AACTCCTTATATTTGCTCCTCTAGAA 57.446 34.615 0.00 0.00 0.00 2.10
2163 6886 9.656323 TTAACTCCTTATATTTGCTCCTCTAGA 57.344 33.333 0.00 0.00 0.00 2.43
2166 6889 8.214364 CCTTTAACTCCTTATATTTGCTCCTCT 58.786 37.037 0.00 0.00 0.00 3.69
2167 6890 8.211629 TCCTTTAACTCCTTATATTTGCTCCTC 58.788 37.037 0.00 0.00 0.00 3.71
2168 6891 8.102484 TCCTTTAACTCCTTATATTTGCTCCT 57.898 34.615 0.00 0.00 0.00 3.69
2169 6892 8.926092 ATCCTTTAACTCCTTATATTTGCTCC 57.074 34.615 0.00 0.00 0.00 4.70
2175 6898 8.827758 GGCTCCTATCCTTTAACTCCTTATATT 58.172 37.037 0.00 0.00 0.00 1.28
2176 6899 7.403522 GGGCTCCTATCCTTTAACTCCTTATAT 59.596 40.741 0.00 0.00 0.00 0.86
2177 6900 6.729569 GGGCTCCTATCCTTTAACTCCTTATA 59.270 42.308 0.00 0.00 0.00 0.98
2178 6901 5.548446 GGGCTCCTATCCTTTAACTCCTTAT 59.452 44.000 0.00 0.00 0.00 1.73
2179 6902 4.906060 GGGCTCCTATCCTTTAACTCCTTA 59.094 45.833 0.00 0.00 0.00 2.69
2180 6903 3.717392 GGGCTCCTATCCTTTAACTCCTT 59.283 47.826 0.00 0.00 0.00 3.36
2181 6904 3.311402 TGGGCTCCTATCCTTTAACTCCT 60.311 47.826 0.00 0.00 0.00 3.69
2182 6905 3.046374 TGGGCTCCTATCCTTTAACTCC 58.954 50.000 0.00 0.00 0.00 3.85
2183 6906 4.984146 ATGGGCTCCTATCCTTTAACTC 57.016 45.455 0.00 0.00 0.00 3.01
2184 6907 9.975464 ATATATATGGGCTCCTATCCTTTAACT 57.025 33.333 0.00 0.00 0.00 2.24
2188 6911 7.964293 CCCTATATATATGGGCTCCTATCCTTT 59.036 40.741 17.59 0.00 33.40 3.11
2189 6912 7.481376 CCCCTATATATATGGGCTCCTATCCTT 60.481 44.444 17.59 0.00 39.61 3.36
2190 6913 6.009388 CCCCTATATATATGGGCTCCTATCCT 60.009 46.154 17.59 0.00 39.61 3.24
2191 6914 6.206042 CCCCTATATATATGGGCTCCTATCC 58.794 48.000 17.59 0.00 39.61 2.59
2200 6923 5.415961 AGCTTAGGCCCCTATATATATGGG 58.584 45.833 22.63 22.63 40.13 4.00
2201 6924 9.784376 TTATAGCTTAGGCCCCTATATATATGG 57.216 37.037 0.00 7.01 39.73 2.74
2204 6927 9.784376 CCATTATAGCTTAGGCCCCTATATATA 57.216 37.037 0.00 0.00 39.73 0.86
2205 6928 8.473435 TCCATTATAGCTTAGGCCCCTATATAT 58.527 37.037 0.00 0.00 39.73 0.86
2206 6929 7.843509 TCCATTATAGCTTAGGCCCCTATATA 58.156 38.462 0.00 0.00 39.73 0.86
2207 6930 6.703769 TCCATTATAGCTTAGGCCCCTATAT 58.296 40.000 0.00 0.00 39.73 0.86
2208 6931 6.112857 TCCATTATAGCTTAGGCCCCTATA 57.887 41.667 0.00 2.58 39.73 1.31
2209 6932 4.972927 TCCATTATAGCTTAGGCCCCTAT 58.027 43.478 0.00 3.60 39.73 2.57
2210 6933 4.429556 TCCATTATAGCTTAGGCCCCTA 57.570 45.455 0.00 0.00 39.73 3.53
2211 6934 3.291626 TCCATTATAGCTTAGGCCCCT 57.708 47.619 0.00 0.00 39.73 4.79
2212 6935 3.432326 CGATCCATTATAGCTTAGGCCCC 60.432 52.174 0.00 0.00 39.73 5.80
2213 6936 3.432326 CCGATCCATTATAGCTTAGGCCC 60.432 52.174 0.00 0.00 39.73 5.80
2214 6937 3.197983 ACCGATCCATTATAGCTTAGGCC 59.802 47.826 0.00 0.00 39.73 5.19
2215 6938 4.473477 ACCGATCCATTATAGCTTAGGC 57.527 45.455 0.00 0.00 39.06 3.93
2216 6939 7.406031 TCTAACCGATCCATTATAGCTTAGG 57.594 40.000 0.00 0.00 0.00 2.69
2217 6940 7.122948 ACCTCTAACCGATCCATTATAGCTTAG 59.877 40.741 0.00 0.00 0.00 2.18
2218 6941 6.952358 ACCTCTAACCGATCCATTATAGCTTA 59.048 38.462 0.00 0.00 0.00 3.09
2219 6942 5.780793 ACCTCTAACCGATCCATTATAGCTT 59.219 40.000 0.00 0.00 0.00 3.74
2220 6943 5.186021 CACCTCTAACCGATCCATTATAGCT 59.814 44.000 0.00 0.00 0.00 3.32
2221 6944 5.411781 CACCTCTAACCGATCCATTATAGC 58.588 45.833 0.00 0.00 0.00 2.97
2222 6945 5.186021 AGCACCTCTAACCGATCCATTATAG 59.814 44.000 0.00 0.00 0.00 1.31
2223 6946 5.084519 AGCACCTCTAACCGATCCATTATA 58.915 41.667 0.00 0.00 0.00 0.98
2224 6947 3.904339 AGCACCTCTAACCGATCCATTAT 59.096 43.478 0.00 0.00 0.00 1.28
2225 6948 3.305720 AGCACCTCTAACCGATCCATTA 58.694 45.455 0.00 0.00 0.00 1.90
2226 6949 2.103263 GAGCACCTCTAACCGATCCATT 59.897 50.000 0.00 0.00 0.00 3.16
2227 6950 1.689273 GAGCACCTCTAACCGATCCAT 59.311 52.381 0.00 0.00 0.00 3.41
2228 6951 1.112113 GAGCACCTCTAACCGATCCA 58.888 55.000 0.00 0.00 0.00 3.41
2229 6952 1.404843 AGAGCACCTCTAACCGATCC 58.595 55.000 0.00 0.00 39.28 3.36
2230 6953 3.004944 CCTTAGAGCACCTCTAACCGATC 59.995 52.174 9.90 0.00 44.85 3.69
2231 6954 2.959707 CCTTAGAGCACCTCTAACCGAT 59.040 50.000 9.90 0.00 44.85 4.18
2232 6955 2.376109 CCTTAGAGCACCTCTAACCGA 58.624 52.381 9.90 0.00 44.85 4.69
2233 6956 1.202428 GCCTTAGAGCACCTCTAACCG 60.202 57.143 9.90 5.65 44.85 4.44
2234 6957 2.112190 AGCCTTAGAGCACCTCTAACC 58.888 52.381 9.90 5.59 44.85 2.85
2235 6958 2.761208 TCAGCCTTAGAGCACCTCTAAC 59.239 50.000 9.90 3.48 44.85 2.34
2236 6959 3.101643 TCAGCCTTAGAGCACCTCTAA 57.898 47.619 12.60 12.60 46.70 2.10
2237 6960 2.761208 GTTCAGCCTTAGAGCACCTCTA 59.239 50.000 0.00 0.00 41.50 2.43
2238 6961 1.552792 GTTCAGCCTTAGAGCACCTCT 59.447 52.381 0.00 0.00 43.83 3.69
2239 6962 1.737363 CGTTCAGCCTTAGAGCACCTC 60.737 57.143 0.00 0.00 34.23 3.85
2240 6963 0.247736 CGTTCAGCCTTAGAGCACCT 59.752 55.000 0.00 0.00 34.23 4.00
2241 6964 0.741221 CCGTTCAGCCTTAGAGCACC 60.741 60.000 0.00 0.00 34.23 5.01
2242 6965 0.037232 ACCGTTCAGCCTTAGAGCAC 60.037 55.000 0.00 0.00 34.23 4.40
2243 6966 1.552578 TACCGTTCAGCCTTAGAGCA 58.447 50.000 0.00 0.00 34.23 4.26
2244 6967 2.094130 ACTTACCGTTCAGCCTTAGAGC 60.094 50.000 0.00 0.00 0.00 4.09
2245 6968 3.870633 ACTTACCGTTCAGCCTTAGAG 57.129 47.619 0.00 0.00 0.00 2.43
2246 6969 4.612264 AAACTTACCGTTCAGCCTTAGA 57.388 40.909 0.00 0.00 33.90 2.10
2247 6970 6.817140 AGATAAAACTTACCGTTCAGCCTTAG 59.183 38.462 0.00 0.00 33.90 2.18
2248 6971 6.704310 AGATAAAACTTACCGTTCAGCCTTA 58.296 36.000 0.00 0.00 33.90 2.69
2249 6972 5.557866 AGATAAAACTTACCGTTCAGCCTT 58.442 37.500 0.00 0.00 33.90 4.35
2250 6973 5.046520 AGAGATAAAACTTACCGTTCAGCCT 60.047 40.000 0.00 0.00 33.90 4.58
2251 6974 5.176592 AGAGATAAAACTTACCGTTCAGCC 58.823 41.667 0.00 0.00 33.90 4.85
2252 6975 5.291371 GGAGAGATAAAACTTACCGTTCAGC 59.709 44.000 0.00 0.00 33.90 4.26
2253 6976 6.395629 TGGAGAGATAAAACTTACCGTTCAG 58.604 40.000 0.00 0.00 33.90 3.02
2254 6977 6.349243 TGGAGAGATAAAACTTACCGTTCA 57.651 37.500 0.00 0.00 33.90 3.18
2255 6978 7.845066 AATGGAGAGATAAAACTTACCGTTC 57.155 36.000 0.00 0.00 33.90 3.95
2256 6979 9.159364 GTAAATGGAGAGATAAAACTTACCGTT 57.841 33.333 0.00 0.00 37.47 4.44
2257 6980 8.316214 TGTAAATGGAGAGATAAAACTTACCGT 58.684 33.333 0.00 0.00 0.00 4.83
2258 6981 8.712285 TGTAAATGGAGAGATAAAACTTACCG 57.288 34.615 0.00 0.00 0.00 4.02
2292 7015 9.646522 ACTGCTAATAAATATGGTGAGGAAATT 57.353 29.630 0.00 0.00 0.00 1.82
2293 7016 9.646522 AACTGCTAATAAATATGGTGAGGAAAT 57.353 29.630 0.00 0.00 0.00 2.17
2295 7018 9.778741 CTAACTGCTAATAAATATGGTGAGGAA 57.221 33.333 0.00 0.00 0.00 3.36
2298 7021 8.499162 GTGCTAACTGCTAATAAATATGGTGAG 58.501 37.037 0.00 0.00 43.37 3.51
2309 7662 5.839063 AGATAGGTGGTGCTAACTGCTAATA 59.161 40.000 0.00 0.00 43.37 0.98
2310 7663 4.656112 AGATAGGTGGTGCTAACTGCTAAT 59.344 41.667 0.00 0.00 43.37 1.73
2311 7664 4.030913 AGATAGGTGGTGCTAACTGCTAA 58.969 43.478 0.00 0.00 43.37 3.09
2312 7665 3.643237 AGATAGGTGGTGCTAACTGCTA 58.357 45.455 0.00 0.00 43.37 3.49
2313 7666 2.472029 AGATAGGTGGTGCTAACTGCT 58.528 47.619 0.00 0.00 43.37 4.24
2314 7667 2.990066 AGATAGGTGGTGCTAACTGC 57.010 50.000 0.00 0.00 43.25 4.40
2315 7668 4.649674 TCCTTAGATAGGTGGTGCTAACTG 59.350 45.833 0.00 0.00 45.03 3.16
2316 7669 4.880164 TCCTTAGATAGGTGGTGCTAACT 58.120 43.478 0.00 0.00 45.03 2.24
2317 7670 5.810080 ATCCTTAGATAGGTGGTGCTAAC 57.190 43.478 0.00 0.00 45.03 2.34
2399 7752 9.860898 ACCAGTTGCTTTAATTAGATCAATTTC 57.139 29.630 0.00 0.00 37.93 2.17
2402 7755 9.686683 ACTACCAGTTGCTTTAATTAGATCAAT 57.313 29.630 0.00 0.00 0.00 2.57
2403 7756 9.515226 AACTACCAGTTGCTTTAATTAGATCAA 57.485 29.630 0.00 0.00 37.00 2.57
2404 7757 9.515226 AAACTACCAGTTGCTTTAATTAGATCA 57.485 29.630 0.00 0.00 38.66 2.92
2405 7758 9.774742 CAAACTACCAGTTGCTTTAATTAGATC 57.225 33.333 0.00 0.00 38.66 2.75
2406 7759 9.297037 ACAAACTACCAGTTGCTTTAATTAGAT 57.703 29.630 0.00 0.00 38.66 1.98
2407 7760 8.685838 ACAAACTACCAGTTGCTTTAATTAGA 57.314 30.769 0.00 0.00 38.66 2.10
2408 7761 9.744468 AAACAAACTACCAGTTGCTTTAATTAG 57.256 29.630 0.00 0.00 38.66 1.73
2410 7763 9.744468 CTAAACAAACTACCAGTTGCTTTAATT 57.256 29.630 0.00 0.00 38.66 1.40
2411 7764 8.909923 ACTAAACAAACTACCAGTTGCTTTAAT 58.090 29.630 0.00 0.00 38.66 1.40
2412 7765 8.283699 ACTAAACAAACTACCAGTTGCTTTAA 57.716 30.769 0.00 0.00 38.66 1.52
2413 7766 7.868906 ACTAAACAAACTACCAGTTGCTTTA 57.131 32.000 0.00 0.00 38.66 1.85
2414 7767 6.769134 ACTAAACAAACTACCAGTTGCTTT 57.231 33.333 0.00 0.00 38.66 3.51
2415 7768 6.769134 AACTAAACAAACTACCAGTTGCTT 57.231 33.333 0.00 0.00 38.66 3.91
2416 7769 6.405397 CCAAACTAAACAAACTACCAGTTGCT 60.405 38.462 0.00 0.00 38.66 3.91
2417 7770 5.746721 CCAAACTAAACAAACTACCAGTTGC 59.253 40.000 0.00 0.00 38.66 4.17
2418 7771 5.746721 GCCAAACTAAACAAACTACCAGTTG 59.253 40.000 0.00 0.00 38.66 3.16
2419 7772 5.449451 CGCCAAACTAAACAAACTACCAGTT 60.449 40.000 0.00 0.00 40.80 3.16
2420 7773 4.035909 CGCCAAACTAAACAAACTACCAGT 59.964 41.667 0.00 0.00 0.00 4.00
2421 7774 4.533222 CGCCAAACTAAACAAACTACCAG 58.467 43.478 0.00 0.00 0.00 4.00
2422 7775 3.315749 CCGCCAAACTAAACAAACTACCA 59.684 43.478 0.00 0.00 0.00 3.25
2423 7776 3.316029 ACCGCCAAACTAAACAAACTACC 59.684 43.478 0.00 0.00 0.00 3.18
2424 7777 4.556942 ACCGCCAAACTAAACAAACTAC 57.443 40.909 0.00 0.00 0.00 2.73
2460 7813 8.134895 GCAACAGTATGGCAAGCTTAATAATTA 58.865 33.333 0.00 0.00 43.62 1.40
2461 7814 6.980397 GCAACAGTATGGCAAGCTTAATAATT 59.020 34.615 0.00 0.00 43.62 1.40
2462 7815 6.322201 AGCAACAGTATGGCAAGCTTAATAAT 59.678 34.615 0.00 0.00 43.62 1.28
2463 7816 5.652014 AGCAACAGTATGGCAAGCTTAATAA 59.348 36.000 0.00 0.00 43.62 1.40
2464 7817 5.192927 AGCAACAGTATGGCAAGCTTAATA 58.807 37.500 0.00 0.00 43.62 0.98
2466 7819 3.420893 AGCAACAGTATGGCAAGCTTAA 58.579 40.909 0.00 0.00 43.62 1.85
2467 7820 3.071874 AGCAACAGTATGGCAAGCTTA 57.928 42.857 0.00 0.00 43.62 3.09
2468 7821 1.915141 AGCAACAGTATGGCAAGCTT 58.085 45.000 0.00 0.00 43.62 3.74
2469 7822 2.787473 TAGCAACAGTATGGCAAGCT 57.213 45.000 0.00 0.00 43.62 3.74
2470 7823 2.749621 ACTTAGCAACAGTATGGCAAGC 59.250 45.455 0.00 0.00 43.62 4.01
2471 7824 6.051717 AGATACTTAGCAACAGTATGGCAAG 58.948 40.000 7.08 0.00 43.62 4.01
2472 7825 5.989477 AGATACTTAGCAACAGTATGGCAA 58.011 37.500 7.08 0.00 43.62 4.52
2473 7826 5.614324 AGATACTTAGCAACAGTATGGCA 57.386 39.130 7.08 0.00 43.62 4.92
2474 7827 6.049149 TCAAGATACTTAGCAACAGTATGGC 58.951 40.000 7.08 0.00 43.62 4.40
2475 7828 8.147058 AGATCAAGATACTTAGCAACAGTATGG 58.853 37.037 7.08 0.00 43.62 2.74
2476 7829 9.539825 AAGATCAAGATACTTAGCAACAGTATG 57.460 33.333 7.08 0.00 37.54 2.39
2478 7831 9.587772 GAAAGATCAAGATACTTAGCAACAGTA 57.412 33.333 0.00 0.00 0.00 2.74
2494 7848 6.944290 TGCCAATGGGATATAGAAAGATCAAG 59.056 38.462 0.00 0.00 35.59 3.02
2500 7854 4.763793 CCACTGCCAATGGGATATAGAAAG 59.236 45.833 0.00 0.00 35.59 2.62
2506 7860 0.538057 CGCCACTGCCAATGGGATAT 60.538 55.000 0.00 0.00 37.73 1.63
2524 7893 2.554032 AGGTGAGAAAAATTGTGGAGCG 59.446 45.455 0.00 0.00 0.00 5.03
2528 7897 4.154195 CGGTAGAGGTGAGAAAAATTGTGG 59.846 45.833 0.00 0.00 0.00 4.17
2534 7903 4.586001 AGTACACGGTAGAGGTGAGAAAAA 59.414 41.667 0.00 0.00 38.73 1.94
2554 7923 7.147742 TGCATCTGTATTCCTATGTGTTGAGTA 60.148 37.037 0.00 0.00 0.00 2.59
2558 7936 6.872628 ATGCATCTGTATTCCTATGTGTTG 57.127 37.500 0.00 0.00 0.00 3.33
2640 8033 8.877864 ACCCTCATCAATATTAAAACACTTCA 57.122 30.769 0.00 0.00 0.00 3.02
2652 8045 7.400339 ACCGATATGTAAGACCCTCATCAATAT 59.600 37.037 0.00 0.00 0.00 1.28
2667 8060 2.288825 GCAGCTGCCTACCGATATGTAA 60.289 50.000 28.76 0.00 34.31 2.41
2668 8061 1.272490 GCAGCTGCCTACCGATATGTA 59.728 52.381 28.76 0.00 34.31 2.29
2670 8063 0.033920 TGCAGCTGCCTACCGATATG 59.966 55.000 34.64 0.00 41.18 1.78
2675 8068 1.064060 GTTAAATGCAGCTGCCTACCG 59.936 52.381 34.64 0.00 41.18 4.02
2773 9651 3.927142 GCTTCGCATCTTACTACACTGTT 59.073 43.478 0.00 0.00 0.00 3.16
2802 9685 1.052124 TTGTTGGTGGGACCGTCTCT 61.052 55.000 0.00 0.00 42.58 3.10
2810 9693 0.467290 GGAGCTTGTTGTTGGTGGGA 60.467 55.000 0.00 0.00 0.00 4.37
2818 9701 2.980233 GCTGCCGGAGCTTGTTGT 60.980 61.111 5.05 0.00 45.21 3.32
2844 9727 8.430801 AGATCCAATTCTTCAAGAAATCTACG 57.569 34.615 3.35 0.00 37.82 3.51
2897 10019 0.307453 TGCTTTCATGTGTGTGTCGC 59.693 50.000 0.00 0.00 0.00 5.19
2938 10065 8.229137 GCTCTAGATAGCTGAATTAAATTGCAG 58.771 37.037 0.00 0.00 39.50 4.41
3012 10143 2.171209 CTCCGTGACCTGCATGTGGA 62.171 60.000 12.69 0.00 0.00 4.02
3154 10285 3.249189 GGTGAGGAGGGTGGCACA 61.249 66.667 20.82 0.00 33.09 4.57
3256 10387 2.273912 ACGGAGGTCTGGGAACGAC 61.274 63.158 0.00 0.00 34.54 4.34
3322 10453 2.767445 CGCATCCACGTACCCGAGA 61.767 63.158 0.00 0.00 37.88 4.04
3323 10454 2.278596 CGCATCCACGTACCCGAG 60.279 66.667 0.00 0.00 37.88 4.63
3406 10537 4.595538 TCGAGGTTGTGGCGCGTT 62.596 61.111 8.43 0.00 0.00 4.84
3461 10592 4.643387 AAGCTTGAACCCGCCGCT 62.643 61.111 0.00 0.00 0.00 5.52
3761 10892 4.819761 GACGCTGGATCGCAGCCA 62.820 66.667 22.59 0.42 42.30 4.75
3762 10893 4.521062 AGACGCTGGATCGCAGCC 62.521 66.667 22.59 13.83 42.30 4.85
3763 10894 2.959071 GAGACGCTGGATCGCAGC 60.959 66.667 20.17 20.17 41.90 5.25
3764 10895 2.279120 GGAGACGCTGGATCGCAG 60.279 66.667 6.79 6.79 0.00 5.18
3765 10896 3.838271 GGGAGACGCTGGATCGCA 61.838 66.667 0.00 0.00 0.00 5.10
3766 10897 2.852495 TTTGGGAGACGCTGGATCGC 62.852 60.000 0.00 0.00 0.00 4.58
3767 10898 0.391130 TTTTGGGAGACGCTGGATCG 60.391 55.000 0.00 0.00 0.00 3.69
3768 10899 1.821216 TTTTTGGGAGACGCTGGATC 58.179 50.000 0.00 0.00 0.00 3.36
3784 10915 1.754201 GCGGGGGCTGATCCTATTTTT 60.754 52.381 0.00 0.00 34.39 1.94
3977 11108 2.900273 GCCGTCAGCCACCATCTA 59.100 61.111 0.00 0.00 34.35 1.98
3978 11109 4.457496 CGCCGTCAGCCACCATCT 62.457 66.667 0.00 0.00 38.78 2.90
4022 11153 1.074471 TCCCCTCCACCTCATAGCC 60.074 63.158 0.00 0.00 0.00 3.93
4250 11422 0.234106 CCATCACTCGATCGCAATGC 59.766 55.000 11.09 0.00 0.00 3.56
4264 11436 1.743623 CGCTAAACCACCGCCATCA 60.744 57.895 0.00 0.00 0.00 3.07
4275 11447 3.521947 AGTGGGACTATGACGCTAAAC 57.478 47.619 0.00 0.00 0.00 2.01
4293 11465 1.613437 CCAAAAACGATGCCCTCAAGT 59.387 47.619 0.00 0.00 0.00 3.16
4319 11492 1.352083 CTGGTCCCTTGAACCTGAGA 58.648 55.000 0.00 0.00 37.80 3.27
4371 11544 0.380378 GGCGCTATTTTCATCGGCAA 59.620 50.000 7.64 0.00 45.06 4.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.