Multiple sequence alignment - TraesCS1D01G418000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G418000 chr1D 100.000 3823 0 0 1 3823 475862713 475866535 0.000000e+00 7060.0
1 TraesCS1D01G418000 chr1D 92.996 671 41 6 2939 3607 66330135 66329469 0.000000e+00 974.0
2 TraesCS1D01G418000 chr1D 92.509 534 34 5 38 569 482006346 482005817 0.000000e+00 760.0
3 TraesCS1D01G418000 chr1D 92.762 525 33 5 41 563 282972823 282972302 0.000000e+00 754.0
4 TraesCS1D01G418000 chr1D 84.370 659 58 29 946 1583 475913078 475913712 4.220000e-169 604.0
5 TraesCS1D01G418000 chr1D 87.234 517 46 14 1074 1583 475923137 475923640 4.280000e-159 571.0
6 TraesCS1D01G418000 chr1D 93.182 44 3 0 2130 2173 475914166 475914209 8.860000e-07 65.8
7 TraesCS1D01G418000 chr1B 88.549 1502 76 30 615 2080 661929237 661930678 0.000000e+00 1733.0
8 TraesCS1D01G418000 chr1B 85.597 729 65 25 878 1583 662004971 662005682 0.000000e+00 728.0
9 TraesCS1D01G418000 chr1B 85.178 533 60 16 1065 1590 662016368 662016888 2.620000e-146 529.0
10 TraesCS1D01G418000 chr1B 85.772 499 52 15 1087 1583 662020297 662020778 9.470000e-141 510.0
11 TraesCS1D01G418000 chr1B 95.288 191 9 0 1083 1273 661923227 661923417 1.730000e-78 303.0
12 TraesCS1D01G418000 chr1B 86.397 272 16 6 2518 2783 661930815 661931071 1.050000e-70 278.0
13 TraesCS1D01G418000 chr1B 95.775 142 6 0 2119 2260 661930677 661930818 2.970000e-56 230.0
14 TraesCS1D01G418000 chr1B 86.400 125 15 2 2815 2938 688689314 688689437 6.660000e-28 135.0
15 TraesCS1D01G418000 chr1B 79.268 164 9 7 780 930 661922965 661923116 1.460000e-14 91.6
16 TraesCS1D01G418000 chr1A 86.925 1499 62 30 564 1984 571724218 571725660 0.000000e+00 1559.0
17 TraesCS1D01G418000 chr1A 85.432 659 53 25 946 1583 571737345 571737981 0.000000e+00 645.0
18 TraesCS1D01G418000 chr1A 86.680 518 47 19 1074 1583 571787021 571787524 4.320000e-154 555.0
19 TraesCS1D01G418000 chr1A 80.548 365 56 13 1065 1426 571743762 571744114 2.260000e-67 267.0
20 TraesCS1D01G418000 chr1A 86.792 159 9 9 2038 2184 571725678 571725836 2.360000e-37 167.0
21 TraesCS1D01G418000 chr5D 93.917 674 36 5 2939 3609 366671629 366672300 0.000000e+00 1013.0
22 TraesCS1D01G418000 chr5D 92.687 670 43 6 2939 3607 565980490 565981154 0.000000e+00 961.0
23 TraesCS1D01G418000 chr5D 92.235 528 37 4 38 563 496198995 496199520 0.000000e+00 745.0
24 TraesCS1D01G418000 chr5D 91.003 289 23 3 2258 2544 444354096 444353809 1.670000e-103 387.0
25 TraesCS1D01G418000 chr7D 92.889 675 38 9 2939 3607 219484112 219483442 0.000000e+00 972.0
26 TraesCS1D01G418000 chr7D 94.356 567 27 4 1 563 4649585 4649020 0.000000e+00 865.0
27 TraesCS1D01G418000 chr7D 92.091 569 33 7 1 563 489123438 489122876 0.000000e+00 791.0
28 TraesCS1D01G418000 chr6D 92.985 670 39 8 2939 3607 414197463 414196801 0.000000e+00 970.0
29 TraesCS1D01G418000 chr6D 93.750 64 4 0 2875 2938 347449406 347449469 3.140000e-16 97.1
30 TraesCS1D01G418000 chr6D 81.416 113 18 3 2806 2918 141270304 141270195 5.260000e-14 89.8
31 TraesCS1D01G418000 chr6A 91.828 673 48 7 2938 3607 404245013 404244345 0.000000e+00 931.0
32 TraesCS1D01G418000 chr6A 95.392 217 9 1 3608 3823 150506896 150506680 1.020000e-90 344.0
33 TraesCS1D01G418000 chr6A 93.519 216 13 1 3608 3823 119614806 119614592 1.710000e-83 320.0
34 TraesCS1D01G418000 chr4D 91.716 676 48 8 2939 3611 101539760 101539090 0.000000e+00 931.0
35 TraesCS1D01G418000 chr4D 84.348 115 15 3 2805 2918 486987752 486987864 4.040000e-20 110.0
36 TraesCS1D01G418000 chr2A 91.716 676 46 7 2938 3605 539738751 539739424 0.000000e+00 929.0
37 TraesCS1D01G418000 chr2A 92.620 271 19 1 2251 2520 575349290 575349020 4.630000e-104 388.0
38 TraesCS1D01G418000 chr3B 91.679 673 47 9 2939 3607 103912027 103911360 0.000000e+00 924.0
39 TraesCS1D01G418000 chr3B 93.233 266 15 3 2257 2520 17707714 17707978 4.630000e-104 388.0
40 TraesCS1D01G418000 chr3B 93.208 265 17 1 2257 2520 368323063 368322799 4.630000e-104 388.0
41 TraesCS1D01G418000 chr3B 89.352 216 20 2 3608 3823 286924822 286924610 6.300000e-68 268.0
42 TraesCS1D01G418000 chr3D 95.070 568 22 5 1 563 20396654 20396088 0.000000e+00 889.0
43 TraesCS1D01G418000 chr3D 94.170 566 29 3 1 565 554220616 554220054 0.000000e+00 859.0
44 TraesCS1D01G418000 chr3D 91.912 544 37 6 26 562 3602786 3602243 0.000000e+00 754.0
45 TraesCS1D01G418000 chr3D 92.614 528 33 5 38 563 53410857 53411380 0.000000e+00 754.0
46 TraesCS1D01G418000 chr3D 93.519 216 14 0 3608 3823 614673499 614673284 4.760000e-84 322.0
47 TraesCS1D01G418000 chr3D 92.481 133 10 0 2804 2936 614673629 614673497 1.400000e-44 191.0
48 TraesCS1D01G418000 chr3D 83.621 116 17 2 2803 2918 82661949 82661836 1.450000e-19 108.0
49 TraesCS1D01G418000 chr7B 92.884 267 18 1 2255 2520 737371254 737371520 1.670000e-103 387.0
50 TraesCS1D01G418000 chr7B 93.182 264 17 1 2258 2520 737774868 737775131 1.670000e-103 387.0
51 TraesCS1D01G418000 chr2B 93.182 264 17 1 2258 2520 775369854 775370117 1.670000e-103 387.0
52 TraesCS1D01G418000 chr2B 84.328 134 18 3 2792 2923 254233690 254233558 1.110000e-25 128.0
53 TraesCS1D01G418000 chr2D 92.830 265 18 1 2257 2520 588718050 588717786 2.150000e-102 383.0
54 TraesCS1D01G418000 chr2D 92.179 179 14 0 3645 3823 21305108 21305286 1.760000e-63 254.0
55 TraesCS1D01G418000 chr2D 87.879 132 12 4 2804 2935 21304955 21305082 6.610000e-33 152.0
56 TraesCS1D01G418000 chr2D 89.394 66 6 1 1 65 534392087 534392022 8.800000e-12 82.4
57 TraesCS1D01G418000 chr5B 91.971 274 19 3 2249 2520 35776709 35776437 7.750000e-102 381.0
58 TraesCS1D01G418000 chrUn 94.037 218 12 1 3607 3823 37814770 37814987 2.850000e-86 329.0
59 TraesCS1D01G418000 chr4A 93.088 217 12 3 3607 3823 734962757 734962544 7.970000e-82 315.0
60 TraesCS1D01G418000 chr4A 93.966 116 7 0 2803 2918 734962880 734962765 3.930000e-40 176.0
61 TraesCS1D01G418000 chr4A 83.621 116 16 2 2803 2918 734233737 734233625 5.220000e-19 106.0
62 TraesCS1D01G418000 chr7A 92.593 216 15 1 3608 3823 229627952 229628166 3.710000e-80 309.0
63 TraesCS1D01G418000 chr6B 90.826 218 19 1 3607 3823 40497704 40497487 1.340000e-74 291.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G418000 chr1D 475862713 475866535 3822 False 7060.0 7060 100.000000 1 3823 1 chr1D.!!$F1 3822
1 TraesCS1D01G418000 chr1D 66329469 66330135 666 True 974.0 974 92.996000 2939 3607 1 chr1D.!!$R1 668
2 TraesCS1D01G418000 chr1D 482005817 482006346 529 True 760.0 760 92.509000 38 569 1 chr1D.!!$R3 531
3 TraesCS1D01G418000 chr1D 282972302 282972823 521 True 754.0 754 92.762000 41 563 1 chr1D.!!$R2 522
4 TraesCS1D01G418000 chr1D 475923137 475923640 503 False 571.0 571 87.234000 1074 1583 1 chr1D.!!$F2 509
5 TraesCS1D01G418000 chr1D 475913078 475914209 1131 False 334.9 604 88.776000 946 2173 2 chr1D.!!$F3 1227
6 TraesCS1D01G418000 chr1B 661929237 661931071 1834 False 747.0 1733 90.240333 615 2783 3 chr1B.!!$F4 2168
7 TraesCS1D01G418000 chr1B 662004971 662005682 711 False 728.0 728 85.597000 878 1583 1 chr1B.!!$F1 705
8 TraesCS1D01G418000 chr1B 662016368 662020778 4410 False 519.5 529 85.475000 1065 1590 2 chr1B.!!$F5 525
9 TraesCS1D01G418000 chr1A 571724218 571725836 1618 False 863.0 1559 86.858500 564 2184 2 chr1A.!!$F4 1620
10 TraesCS1D01G418000 chr1A 571737345 571737981 636 False 645.0 645 85.432000 946 1583 1 chr1A.!!$F1 637
11 TraesCS1D01G418000 chr1A 571787021 571787524 503 False 555.0 555 86.680000 1074 1583 1 chr1A.!!$F3 509
12 TraesCS1D01G418000 chr5D 366671629 366672300 671 False 1013.0 1013 93.917000 2939 3609 1 chr5D.!!$F1 670
13 TraesCS1D01G418000 chr5D 565980490 565981154 664 False 961.0 961 92.687000 2939 3607 1 chr5D.!!$F3 668
14 TraesCS1D01G418000 chr5D 496198995 496199520 525 False 745.0 745 92.235000 38 563 1 chr5D.!!$F2 525
15 TraesCS1D01G418000 chr7D 219483442 219484112 670 True 972.0 972 92.889000 2939 3607 1 chr7D.!!$R2 668
16 TraesCS1D01G418000 chr7D 4649020 4649585 565 True 865.0 865 94.356000 1 563 1 chr7D.!!$R1 562
17 TraesCS1D01G418000 chr7D 489122876 489123438 562 True 791.0 791 92.091000 1 563 1 chr7D.!!$R3 562
18 TraesCS1D01G418000 chr6D 414196801 414197463 662 True 970.0 970 92.985000 2939 3607 1 chr6D.!!$R2 668
19 TraesCS1D01G418000 chr6A 404244345 404245013 668 True 931.0 931 91.828000 2938 3607 1 chr6A.!!$R3 669
20 TraesCS1D01G418000 chr4D 101539090 101539760 670 True 931.0 931 91.716000 2939 3611 1 chr4D.!!$R1 672
21 TraesCS1D01G418000 chr2A 539738751 539739424 673 False 929.0 929 91.716000 2938 3605 1 chr2A.!!$F1 667
22 TraesCS1D01G418000 chr3B 103911360 103912027 667 True 924.0 924 91.679000 2939 3607 1 chr3B.!!$R1 668
23 TraesCS1D01G418000 chr3D 20396088 20396654 566 True 889.0 889 95.070000 1 563 1 chr3D.!!$R2 562
24 TraesCS1D01G418000 chr3D 554220054 554220616 562 True 859.0 859 94.170000 1 565 1 chr3D.!!$R4 564
25 TraesCS1D01G418000 chr3D 3602243 3602786 543 True 754.0 754 91.912000 26 562 1 chr3D.!!$R1 536
26 TraesCS1D01G418000 chr3D 53410857 53411380 523 False 754.0 754 92.614000 38 563 1 chr3D.!!$F1 525

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
606 621 0.035439 CGCCCCCTCTAGAAGCAAAA 60.035 55.0 0.0 0.0 0.00 2.44 F
721 740 0.179020 TGCCAGTGAGGAACCACTTG 60.179 55.0 0.0 0.0 44.32 3.16 F
2271 6377 0.242017 CGACGTACTCCCTCCGTTTT 59.758 55.0 0.0 0.0 34.51 2.43 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2512 6618 0.391927 TTTGCTCGATTGTACCCCCG 60.392 55.0 0.0 0.0 0.0 5.73 R
2513 6619 1.828979 TTTTGCTCGATTGTACCCCC 58.171 50.0 0.0 0.0 0.0 5.40 R
3283 7399 0.109723 TATATGTTGAAGGGGCGGGC 59.890 55.0 0.0 0.0 0.0 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
172 176 0.942252 ACCAAAAAGAAGACGCCGAC 59.058 50.000 0.00 0.00 0.00 4.79
227 238 0.771755 AGGGCTCGGGAAAAAGACTT 59.228 50.000 0.00 0.00 0.00 3.01
229 240 1.961394 GGGCTCGGGAAAAAGACTTTT 59.039 47.619 7.38 7.38 37.46 2.27
311 322 3.023949 GCAGTCATGGAGGCCGACT 62.024 63.158 4.56 4.56 40.60 4.18
525 540 6.041296 GGTAGGAGACGGATTACAAATCCTAA 59.959 42.308 14.93 0.00 39.11 2.69
527 542 7.138054 AGGAGACGGATTACAAATCCTAAAT 57.862 36.000 14.93 1.13 33.99 1.40
586 601 2.676632 TCATGCCATGCAAACCATTC 57.323 45.000 0.00 0.00 43.62 2.67
598 613 1.345715 AACCATTCCGCCCCCTCTAG 61.346 60.000 0.00 0.00 0.00 2.43
600 615 1.054406 CCATTCCGCCCCCTCTAGAA 61.054 60.000 0.00 0.00 0.00 2.10
603 618 2.764128 CCGCCCCCTCTAGAAGCA 60.764 66.667 0.00 0.00 0.00 3.91
604 619 2.367202 CCGCCCCCTCTAGAAGCAA 61.367 63.158 0.00 0.00 0.00 3.91
605 620 1.602237 CGCCCCCTCTAGAAGCAAA 59.398 57.895 0.00 0.00 0.00 3.68
606 621 0.035439 CGCCCCCTCTAGAAGCAAAA 60.035 55.000 0.00 0.00 0.00 2.44
607 622 1.613255 CGCCCCCTCTAGAAGCAAAAA 60.613 52.381 0.00 0.00 0.00 1.94
685 704 2.166270 GCAGCTAGTTGGTCACTGC 58.834 57.895 8.78 4.72 45.95 4.40
704 723 1.937359 CGATCAAACACGTCACTTGC 58.063 50.000 0.00 0.00 0.00 4.01
721 740 0.179020 TGCCAGTGAGGAACCACTTG 60.179 55.000 0.00 0.00 44.32 3.16
799 838 3.005578 GTGGTCGGAGAGTAGTCTTGTTT 59.994 47.826 0.56 0.00 36.95 2.83
928 981 2.361104 TGCGGACCAATTCCCTGC 60.361 61.111 0.00 0.00 42.27 4.85
985 1042 2.367947 AAATCCTCCTCTTCCCCTGT 57.632 50.000 0.00 0.00 0.00 4.00
986 1043 1.886422 AATCCTCCTCTTCCCCTGTC 58.114 55.000 0.00 0.00 0.00 3.51
987 1044 0.397816 ATCCTCCTCTTCCCCTGTCG 60.398 60.000 0.00 0.00 0.00 4.35
988 1045 2.726351 CCTCCTCTTCCCCTGTCGC 61.726 68.421 0.00 0.00 0.00 5.19
989 1046 2.683933 TCCTCTTCCCCTGTCGCC 60.684 66.667 0.00 0.00 0.00 5.54
990 1047 3.003173 CCTCTTCCCCTGTCGCCA 61.003 66.667 0.00 0.00 0.00 5.69
991 1048 2.266055 CTCTTCCCCTGTCGCCAC 59.734 66.667 0.00 0.00 0.00 5.01
1248 5219 3.458163 GTCGACCGGGCCATGAGA 61.458 66.667 6.32 0.00 0.00 3.27
1419 5429 4.760047 AGCTGGCGCAAGTACGGG 62.760 66.667 14.59 0.00 39.10 5.28
1641 5696 2.355115 GGGATTCAGTGGCCGGTT 59.645 61.111 1.90 0.00 0.00 4.44
1775 5845 1.131303 ATGGGGTTCGGGAGTCAACA 61.131 55.000 0.00 0.00 0.00 3.33
1803 5888 2.093447 GTGGTTCCTGAATCTGTCCGAT 60.093 50.000 0.00 0.00 0.00 4.18
1807 5892 3.981071 TCCTGAATCTGTCCGATGTTT 57.019 42.857 0.00 0.00 31.20 2.83
1808 5893 4.286297 TCCTGAATCTGTCCGATGTTTT 57.714 40.909 0.00 0.00 31.20 2.43
1809 5894 4.253685 TCCTGAATCTGTCCGATGTTTTC 58.746 43.478 0.00 0.00 31.20 2.29
1810 5895 3.375299 CCTGAATCTGTCCGATGTTTTCC 59.625 47.826 0.00 0.00 31.20 3.13
1811 5896 4.002982 CTGAATCTGTCCGATGTTTTCCA 58.997 43.478 0.00 0.00 31.20 3.53
1812 5897 4.393834 TGAATCTGTCCGATGTTTTCCAA 58.606 39.130 0.00 0.00 31.20 3.53
1813 5898 4.215399 TGAATCTGTCCGATGTTTTCCAAC 59.785 41.667 0.00 0.00 31.20 3.77
1814 5899 2.500229 TCTGTCCGATGTTTTCCAACC 58.500 47.619 0.00 0.00 31.02 3.77
1815 5900 1.539827 CTGTCCGATGTTTTCCAACCC 59.460 52.381 0.00 0.00 31.02 4.11
1816 5901 0.519961 GTCCGATGTTTTCCAACCCG 59.480 55.000 0.00 0.00 31.02 5.28
1817 5902 0.397187 TCCGATGTTTTCCAACCCGA 59.603 50.000 0.00 0.00 32.69 5.14
1818 5903 0.802494 CCGATGTTTTCCAACCCGAG 59.198 55.000 0.00 0.00 32.69 4.63
1819 5904 0.802494 CGATGTTTTCCAACCCGAGG 59.198 55.000 0.00 0.00 32.69 4.63
1820 5905 1.880646 CGATGTTTTCCAACCCGAGGT 60.881 52.381 0.00 0.00 37.65 3.85
1897 5984 4.325741 GCACTGCAGCAGTATATAGATTCG 59.674 45.833 27.80 12.26 43.43 3.34
2048 6142 6.710744 TGTCTCCCATTAAGAGAGAAAACAAC 59.289 38.462 4.06 0.00 40.96 3.32
2085 6179 9.360093 ACGTCTAGAGACTTAATTTGATTCTTG 57.640 33.333 8.01 0.00 42.66 3.02
2090 6184 8.190888 AGAGACTTAATTTGATTCTTGCGTAG 57.809 34.615 0.00 0.00 0.00 3.51
2101 6195 2.758327 TGCGTAGGCATCGGGACT 60.758 61.111 5.89 0.00 46.21 3.85
2102 6196 1.454295 TGCGTAGGCATCGGGACTA 60.454 57.895 5.89 0.00 46.21 2.59
2111 6215 4.080687 AGGCATCGGGACTATAGAAGTAC 58.919 47.826 6.78 0.00 39.07 2.73
2115 6219 6.349197 GGCATCGGGACTATAGAAGTACTTAC 60.349 46.154 8.42 2.64 39.28 2.34
2118 6222 6.219473 TCGGGACTATAGAAGTACTTACTCG 58.781 44.000 8.42 6.36 39.28 4.18
2198 6304 8.526147 CAAATATGAAAGGTTCCTGATTTCAGT 58.474 33.333 6.81 1.17 43.83 3.41
2202 6308 3.425162 AGGTTCCTGATTTCAGTGACC 57.575 47.619 16.11 16.11 42.48 4.02
2210 6316 6.720309 TCCTGATTTCAGTGACCAATATGAA 58.280 36.000 6.81 0.00 42.27 2.57
2260 6366 0.663568 GTTGCTCACTGCGACGTACT 60.664 55.000 0.00 0.00 45.05 2.73
2261 6367 0.386858 TTGCTCACTGCGACGTACTC 60.387 55.000 0.00 0.00 46.63 2.59
2262 6368 1.514443 GCTCACTGCGACGTACTCC 60.514 63.158 0.00 0.00 0.00 3.85
2264 6370 1.303074 TCACTGCGACGTACTCCCT 60.303 57.895 0.00 0.00 0.00 4.20
2265 6371 1.136984 CACTGCGACGTACTCCCTC 59.863 63.158 0.00 0.00 0.00 4.30
2266 6372 2.045131 ACTGCGACGTACTCCCTCC 61.045 63.158 0.00 0.00 0.00 4.30
2267 6373 3.109612 CTGCGACGTACTCCCTCCG 62.110 68.421 0.00 0.00 0.00 4.63
2268 6374 3.130160 GCGACGTACTCCCTCCGT 61.130 66.667 0.00 0.00 37.56 4.69
2269 6375 2.694760 GCGACGTACTCCCTCCGTT 61.695 63.158 0.00 0.00 34.51 4.44
2270 6376 1.878775 CGACGTACTCCCTCCGTTT 59.121 57.895 0.00 0.00 34.51 3.60
2271 6377 0.242017 CGACGTACTCCCTCCGTTTT 59.758 55.000 0.00 0.00 34.51 2.43
2272 6378 1.468520 CGACGTACTCCCTCCGTTTTA 59.531 52.381 0.00 0.00 34.51 1.52
2273 6379 2.095263 CGACGTACTCCCTCCGTTTTAA 60.095 50.000 0.00 0.00 34.51 1.52
2274 6380 3.611530 CGACGTACTCCCTCCGTTTTAAA 60.612 47.826 0.00 0.00 34.51 1.52
2275 6381 4.306600 GACGTACTCCCTCCGTTTTAAAA 58.693 43.478 0.00 0.00 34.51 1.52
2276 6382 4.309933 ACGTACTCCCTCCGTTTTAAAAG 58.690 43.478 0.00 0.00 0.00 2.27
2277 6383 4.039124 ACGTACTCCCTCCGTTTTAAAAGA 59.961 41.667 0.00 0.00 0.00 2.52
2278 6384 4.624452 CGTACTCCCTCCGTTTTAAAAGAG 59.376 45.833 0.00 5.64 0.00 2.85
2279 6385 4.701651 ACTCCCTCCGTTTTAAAAGAGT 57.298 40.909 13.29 12.05 0.00 3.24
2280 6386 4.386711 ACTCCCTCCGTTTTAAAAGAGTG 58.613 43.478 14.16 5.72 32.37 3.51
2281 6387 3.746940 TCCCTCCGTTTTAAAAGAGTGG 58.253 45.455 13.29 13.20 0.00 4.00
2282 6388 3.391955 TCCCTCCGTTTTAAAAGAGTGGA 59.608 43.478 15.13 15.41 0.00 4.02
2283 6389 3.501062 CCCTCCGTTTTAAAAGAGTGGAC 59.499 47.826 15.13 0.00 0.00 4.02
2284 6390 4.386711 CCTCCGTTTTAAAAGAGTGGACT 58.613 43.478 13.29 0.00 0.00 3.85
2285 6391 4.820173 CCTCCGTTTTAAAAGAGTGGACTT 59.180 41.667 13.29 0.00 0.00 3.01
2286 6392 5.049612 CCTCCGTTTTAAAAGAGTGGACTTC 60.050 44.000 13.29 0.00 0.00 3.01
2287 6393 4.818005 TCCGTTTTAAAAGAGTGGACTTCC 59.182 41.667 0.00 0.00 0.00 3.46
2288 6394 4.577283 CCGTTTTAAAAGAGTGGACTTCCA 59.423 41.667 0.00 0.00 45.30 3.53
2302 6408 6.693315 TGGACTTCCAACTTTGTTAGAAAG 57.307 37.500 0.07 0.07 44.35 2.62
2303 6409 6.184789 TGGACTTCCAACTTTGTTAGAAAGT 58.815 36.000 1.45 1.45 44.35 2.66
2304 6410 6.317893 TGGACTTCCAACTTTGTTAGAAAGTC 59.682 38.462 7.94 15.52 44.35 3.01
2305 6411 6.317893 GGACTTCCAACTTTGTTAGAAAGTCA 59.682 38.462 7.94 0.00 39.36 3.41
2306 6412 7.148137 GGACTTCCAACTTTGTTAGAAAGTCAA 60.148 37.037 7.94 1.97 39.36 3.18
2307 6413 7.535997 ACTTCCAACTTTGTTAGAAAGTCAAC 58.464 34.615 7.94 0.00 39.36 3.18
2308 6414 7.393515 ACTTCCAACTTTGTTAGAAAGTCAACT 59.606 33.333 7.94 0.00 39.36 3.16
2309 6415 7.696992 TCCAACTTTGTTAGAAAGTCAACTT 57.303 32.000 7.94 0.00 39.36 2.66
2311 6417 8.581578 TCCAACTTTGTTAGAAAGTCAACTTTT 58.418 29.630 7.94 3.44 45.37 2.27
2312 6418 9.203421 CCAACTTTGTTAGAAAGTCAACTTTTT 57.797 29.630 7.94 6.73 45.37 1.94
2334 6440 6.783892 TTTTAGGTTTGACCGTATGTGTAC 57.216 37.500 0.00 0.00 44.90 2.90
2335 6441 5.465532 TTAGGTTTGACCGTATGTGTACA 57.534 39.130 0.00 0.00 44.90 2.90
2336 6442 4.339872 AGGTTTGACCGTATGTGTACAA 57.660 40.909 0.00 0.00 44.90 2.41
2337 6443 4.901868 AGGTTTGACCGTATGTGTACAAT 58.098 39.130 0.00 0.00 44.90 2.71
2338 6444 6.040209 AGGTTTGACCGTATGTGTACAATA 57.960 37.500 0.00 0.00 44.90 1.90
2339 6445 6.465948 AGGTTTGACCGTATGTGTACAATAA 58.534 36.000 0.00 0.00 44.90 1.40
2340 6446 7.107542 AGGTTTGACCGTATGTGTACAATAAT 58.892 34.615 0.00 0.00 44.90 1.28
2341 6447 8.259411 AGGTTTGACCGTATGTGTACAATAATA 58.741 33.333 0.00 0.00 44.90 0.98
2342 6448 8.545420 GGTTTGACCGTATGTGTACAATAATAG 58.455 37.037 0.00 0.00 0.00 1.73
2343 6449 9.304731 GTTTGACCGTATGTGTACAATAATAGA 57.695 33.333 0.00 0.00 0.00 1.98
2344 6450 8.861033 TTGACCGTATGTGTACAATAATAGAC 57.139 34.615 0.00 0.00 0.00 2.59
2345 6451 7.428020 TGACCGTATGTGTACAATAATAGACC 58.572 38.462 0.00 0.00 0.00 3.85
2346 6452 7.068470 TGACCGTATGTGTACAATAATAGACCA 59.932 37.037 0.00 0.00 0.00 4.02
2347 6453 7.784037 ACCGTATGTGTACAATAATAGACCAA 58.216 34.615 0.00 0.00 0.00 3.67
2348 6454 7.707893 ACCGTATGTGTACAATAATAGACCAAC 59.292 37.037 0.00 0.00 0.00 3.77
2349 6455 7.707464 CCGTATGTGTACAATAATAGACCAACA 59.293 37.037 0.00 0.00 0.00 3.33
2350 6456 9.256477 CGTATGTGTACAATAATAGACCAACAT 57.744 33.333 0.00 0.00 0.00 2.71
2357 6463 9.893305 GTACAATAATAGACCAACATTTATGCC 57.107 33.333 0.00 0.00 0.00 4.40
2358 6464 8.532186 ACAATAATAGACCAACATTTATGCCA 57.468 30.769 0.00 0.00 0.00 4.92
2359 6465 9.146586 ACAATAATAGACCAACATTTATGCCAT 57.853 29.630 0.00 0.00 0.00 4.40
2360 6466 9.630098 CAATAATAGACCAACATTTATGCCATC 57.370 33.333 0.00 0.00 0.00 3.51
2361 6467 8.938801 ATAATAGACCAACATTTATGCCATCA 57.061 30.769 0.00 0.00 0.00 3.07
2362 6468 7.658525 AATAGACCAACATTTATGCCATCAA 57.341 32.000 0.00 0.00 0.00 2.57
2363 6469 5.999205 AGACCAACATTTATGCCATCAAA 57.001 34.783 0.00 0.00 0.00 2.69
2364 6470 6.549433 AGACCAACATTTATGCCATCAAAT 57.451 33.333 0.00 0.00 0.00 2.32
2365 6471 6.949715 AGACCAACATTTATGCCATCAAATT 58.050 32.000 0.00 0.00 0.00 1.82
2366 6472 8.076910 AGACCAACATTTATGCCATCAAATTA 57.923 30.769 0.00 0.00 0.00 1.40
2367 6473 8.199449 AGACCAACATTTATGCCATCAAATTAG 58.801 33.333 0.00 0.00 0.00 1.73
2368 6474 7.850193 ACCAACATTTATGCCATCAAATTAGT 58.150 30.769 0.00 0.00 0.00 2.24
2369 6475 8.976353 ACCAACATTTATGCCATCAAATTAGTA 58.024 29.630 0.00 0.00 0.00 1.82
2370 6476 9.467258 CCAACATTTATGCCATCAAATTAGTAG 57.533 33.333 0.00 0.00 0.00 2.57
2371 6477 8.971321 CAACATTTATGCCATCAAATTAGTAGC 58.029 33.333 0.00 0.00 0.00 3.58
2372 6478 8.236585 ACATTTATGCCATCAAATTAGTAGCA 57.763 30.769 0.00 0.00 0.00 3.49
2373 6479 8.863086 ACATTTATGCCATCAAATTAGTAGCAT 58.137 29.630 0.00 0.00 41.89 3.79
2374 6480 9.701098 CATTTATGCCATCAAATTAGTAGCATT 57.299 29.630 0.00 0.00 39.89 3.56
2377 6483 9.791801 TTATGCCATCAAATTAGTAGCATTAGA 57.208 29.630 0.00 0.00 39.89 2.10
2378 6484 8.874744 ATGCCATCAAATTAGTAGCATTAGAT 57.125 30.769 0.00 0.00 36.10 1.98
2379 6485 8.696043 TGCCATCAAATTAGTAGCATTAGATT 57.304 30.769 0.00 0.00 0.00 2.40
2380 6486 8.786898 TGCCATCAAATTAGTAGCATTAGATTC 58.213 33.333 0.00 0.00 0.00 2.52
2381 6487 8.786898 GCCATCAAATTAGTAGCATTAGATTCA 58.213 33.333 0.00 0.00 0.00 2.57
2448 6554 9.439500 AAGCATTGATATATTTTTGCACAAACT 57.561 25.926 0.00 0.00 32.66 2.66
2449 6555 9.090692 AGCATTGATATATTTTTGCACAAACTC 57.909 29.630 0.00 0.00 32.66 3.01
2450 6556 8.051909 GCATTGATATATTTTTGCACAAACTCG 58.948 33.333 0.00 0.00 0.00 4.18
2451 6557 8.533965 CATTGATATATTTTTGCACAAACTCGG 58.466 33.333 0.00 0.00 0.00 4.63
2452 6558 7.151999 TGATATATTTTTGCACAAACTCGGT 57.848 32.000 0.00 0.00 0.00 4.69
2453 6559 7.247728 TGATATATTTTTGCACAAACTCGGTC 58.752 34.615 0.00 0.00 0.00 4.79
2454 6560 3.791973 ATTTTTGCACAAACTCGGTCA 57.208 38.095 0.00 0.00 0.00 4.02
2455 6561 3.577649 TTTTTGCACAAACTCGGTCAA 57.422 38.095 0.00 0.00 0.00 3.18
2456 6562 3.577649 TTTTGCACAAACTCGGTCAAA 57.422 38.095 0.00 0.00 0.00 2.69
2457 6563 2.553079 TTGCACAAACTCGGTCAAAC 57.447 45.000 0.00 0.00 0.00 2.93
2458 6564 1.745232 TGCACAAACTCGGTCAAACT 58.255 45.000 0.00 0.00 0.00 2.66
2459 6565 2.088423 TGCACAAACTCGGTCAAACTT 58.912 42.857 0.00 0.00 0.00 2.66
2460 6566 2.490115 TGCACAAACTCGGTCAAACTTT 59.510 40.909 0.00 0.00 0.00 2.66
2461 6567 2.851824 GCACAAACTCGGTCAAACTTTG 59.148 45.455 0.00 0.00 0.00 2.77
2462 6568 3.426963 GCACAAACTCGGTCAAACTTTGA 60.427 43.478 0.00 0.00 37.33 2.69
2463 6569 4.342772 CACAAACTCGGTCAAACTTTGAG 58.657 43.478 4.36 0.00 41.01 3.02
2464 6570 4.094294 CACAAACTCGGTCAAACTTTGAGA 59.906 41.667 4.36 0.00 41.01 3.27
2465 6571 4.881850 ACAAACTCGGTCAAACTTTGAGAT 59.118 37.500 4.36 0.00 41.01 2.75
2466 6572 6.018262 CACAAACTCGGTCAAACTTTGAGATA 60.018 38.462 4.36 0.00 41.01 1.98
2467 6573 6.202954 ACAAACTCGGTCAAACTTTGAGATAG 59.797 38.462 4.36 5.24 41.01 2.08
2468 6574 5.470047 ACTCGGTCAAACTTTGAGATAGT 57.530 39.130 4.36 5.79 41.01 2.12
2469 6575 5.855045 ACTCGGTCAAACTTTGAGATAGTT 58.145 37.500 4.36 0.00 41.01 2.24
2470 6576 6.289064 ACTCGGTCAAACTTTGAGATAGTTT 58.711 36.000 4.36 0.00 44.38 2.66
2478 6584 5.167303 ACTTTGAGATAGTTTGACCCTCC 57.833 43.478 0.00 0.00 0.00 4.30
2479 6585 4.597507 ACTTTGAGATAGTTTGACCCTCCA 59.402 41.667 0.00 0.00 0.00 3.86
2480 6586 5.073144 ACTTTGAGATAGTTTGACCCTCCAA 59.927 40.000 0.00 0.00 0.00 3.53
2481 6587 4.553330 TGAGATAGTTTGACCCTCCAAC 57.447 45.455 0.00 0.00 0.00 3.77
2482 6588 3.907474 TGAGATAGTTTGACCCTCCAACA 59.093 43.478 0.00 0.00 0.00 3.33
2483 6589 4.349636 TGAGATAGTTTGACCCTCCAACAA 59.650 41.667 0.00 0.00 0.00 2.83
2484 6590 5.163141 TGAGATAGTTTGACCCTCCAACAAA 60.163 40.000 0.00 0.00 0.00 2.83
2485 6591 5.316987 AGATAGTTTGACCCTCCAACAAAG 58.683 41.667 0.00 0.00 34.86 2.77
2486 6592 3.382083 AGTTTGACCCTCCAACAAAGT 57.618 42.857 0.00 0.00 34.86 2.66
2487 6593 3.708451 AGTTTGACCCTCCAACAAAGTT 58.292 40.909 0.00 0.00 34.79 2.66
2488 6594 3.447229 AGTTTGACCCTCCAACAAAGTTG 59.553 43.478 3.00 3.00 34.79 3.16
2489 6595 2.065899 TGACCCTCCAACAAAGTTGG 57.934 50.000 20.09 20.09 40.87 3.77
2490 6596 1.566703 TGACCCTCCAACAAAGTTGGA 59.433 47.619 25.17 25.17 45.61 3.53
2491 6597 2.024846 TGACCCTCCAACAAAGTTGGAA 60.025 45.455 26.25 12.88 46.85 3.53
2492 6598 2.623416 GACCCTCCAACAAAGTTGGAAG 59.377 50.000 26.25 21.51 46.85 3.46
2493 6599 2.024369 ACCCTCCAACAAAGTTGGAAGT 60.024 45.455 26.25 22.95 46.85 3.01
2494 6600 3.203487 ACCCTCCAACAAAGTTGGAAGTA 59.797 43.478 26.25 9.67 46.85 2.24
2495 6601 3.568430 CCCTCCAACAAAGTTGGAAGTAC 59.432 47.826 26.25 0.00 46.85 2.73
2496 6602 4.204012 CCTCCAACAAAGTTGGAAGTACA 58.796 43.478 26.25 8.75 46.85 2.90
2497 6603 4.036380 CCTCCAACAAAGTTGGAAGTACAC 59.964 45.833 26.25 0.00 46.85 2.90
2498 6604 4.850680 TCCAACAAAGTTGGAAGTACACT 58.149 39.130 24.83 0.00 44.90 3.55
2499 6605 4.879545 TCCAACAAAGTTGGAAGTACACTC 59.120 41.667 24.83 0.00 44.90 3.51
2500 6606 4.881850 CCAACAAAGTTGGAAGTACACTCT 59.118 41.667 21.24 0.00 42.06 3.24
2501 6607 5.357032 CCAACAAAGTTGGAAGTACACTCTT 59.643 40.000 21.24 0.00 42.06 2.85
2502 6608 6.127730 CCAACAAAGTTGGAAGTACACTCTTT 60.128 38.462 21.24 0.00 42.06 2.52
2503 6609 6.679327 ACAAAGTTGGAAGTACACTCTTTC 57.321 37.500 0.00 0.00 0.00 2.62
2504 6610 6.177610 ACAAAGTTGGAAGTACACTCTTTCA 58.822 36.000 0.00 0.00 31.87 2.69
2505 6611 6.657541 ACAAAGTTGGAAGTACACTCTTTCAA 59.342 34.615 0.00 0.00 39.65 2.69
2506 6612 7.175990 ACAAAGTTGGAAGTACACTCTTTCAAA 59.824 33.333 0.00 0.00 42.32 2.69
2507 6613 6.927294 AGTTGGAAGTACACTCTTTCAAAG 57.073 37.500 0.00 0.00 42.32 2.77
2508 6614 6.650120 AGTTGGAAGTACACTCTTTCAAAGA 58.350 36.000 0.00 0.00 42.32 2.52
2509 6615 6.539103 AGTTGGAAGTACACTCTTTCAAAGAC 59.461 38.462 0.00 0.00 42.32 3.01
2510 6616 5.047847 TGGAAGTACACTCTTTCAAAGACG 58.952 41.667 0.00 0.00 30.93 4.18
2511 6617 4.448060 GGAAGTACACTCTTTCAAAGACGG 59.552 45.833 0.00 0.00 33.12 4.79
2512 6618 3.391049 AGTACACTCTTTCAAAGACGGC 58.609 45.455 0.00 0.00 33.12 5.68
2513 6619 1.217882 ACACTCTTTCAAAGACGGCG 58.782 50.000 4.80 4.80 33.12 6.46
2514 6620 0.512952 CACTCTTTCAAAGACGGCGG 59.487 55.000 13.24 0.00 33.12 6.13
2515 6621 0.602905 ACTCTTTCAAAGACGGCGGG 60.603 55.000 13.24 0.00 33.12 6.13
2516 6622 1.298859 CTCTTTCAAAGACGGCGGGG 61.299 60.000 13.24 0.00 33.12 5.73
2517 6623 2.281900 TTTCAAAGACGGCGGGGG 60.282 61.111 13.24 0.00 0.00 5.40
2518 6624 3.122727 TTTCAAAGACGGCGGGGGT 62.123 57.895 13.24 0.00 0.00 4.95
2519 6625 1.766625 TTTCAAAGACGGCGGGGGTA 61.767 55.000 13.24 0.00 0.00 3.69
2520 6626 2.435410 CAAAGACGGCGGGGGTAC 60.435 66.667 13.24 0.00 0.00 3.34
2521 6627 2.924101 AAAGACGGCGGGGGTACA 60.924 61.111 13.24 0.00 0.00 2.90
2522 6628 2.518709 AAAGACGGCGGGGGTACAA 61.519 57.895 13.24 0.00 0.00 2.41
2523 6629 1.844544 AAAGACGGCGGGGGTACAAT 61.845 55.000 13.24 0.00 0.00 2.71
2524 6630 2.202974 GACGGCGGGGGTACAATC 60.203 66.667 13.24 0.00 0.00 2.67
2525 6631 4.151582 ACGGCGGGGGTACAATCG 62.152 66.667 13.24 0.00 0.00 3.34
2526 6632 3.840594 CGGCGGGGGTACAATCGA 61.841 66.667 0.00 0.00 0.00 3.59
2527 6633 2.108362 GGCGGGGGTACAATCGAG 59.892 66.667 0.00 0.00 0.00 4.04
2528 6634 2.588034 GCGGGGGTACAATCGAGC 60.588 66.667 0.00 0.00 0.00 5.03
2529 6635 2.897207 CGGGGGTACAATCGAGCA 59.103 61.111 0.00 0.00 0.00 4.26
2533 6639 2.164338 GGGGGTACAATCGAGCAAAAA 58.836 47.619 0.00 0.00 0.00 1.94
2534 6640 2.163613 GGGGGTACAATCGAGCAAAAAG 59.836 50.000 0.00 0.00 0.00 2.27
2758 6870 9.923143 GTAAATTTGTGGAAGCTACCTTATTTT 57.077 29.630 0.00 0.00 0.00 1.82
2850 6962 7.948278 AATAAGTATCCTTAGTTCGTCATGC 57.052 36.000 0.00 0.00 36.63 4.06
2851 6963 5.599999 AAGTATCCTTAGTTCGTCATGCT 57.400 39.130 0.00 0.00 0.00 3.79
2852 6964 6.710597 AAGTATCCTTAGTTCGTCATGCTA 57.289 37.500 0.00 0.00 0.00 3.49
2853 6965 6.902771 AGTATCCTTAGTTCGTCATGCTAT 57.097 37.500 0.00 0.00 0.00 2.97
2854 6966 7.291411 AGTATCCTTAGTTCGTCATGCTATT 57.709 36.000 0.00 0.00 0.00 1.73
2855 6967 7.727181 AGTATCCTTAGTTCGTCATGCTATTT 58.273 34.615 0.00 0.00 0.00 1.40
2856 6968 8.204836 AGTATCCTTAGTTCGTCATGCTATTTT 58.795 33.333 0.00 0.00 0.00 1.82
2857 6969 6.662414 TCCTTAGTTCGTCATGCTATTTTG 57.338 37.500 0.00 0.00 0.00 2.44
2858 6970 5.064707 TCCTTAGTTCGTCATGCTATTTTGC 59.935 40.000 0.00 0.00 0.00 3.68
2860 6972 4.346734 AGTTCGTCATGCTATTTTGCAG 57.653 40.909 0.00 0.00 46.71 4.41
2861 6973 4.002982 AGTTCGTCATGCTATTTTGCAGA 58.997 39.130 0.00 0.00 46.71 4.26
2862 6974 4.455533 AGTTCGTCATGCTATTTTGCAGAA 59.544 37.500 0.00 0.00 46.71 3.02
2863 6975 5.048782 AGTTCGTCATGCTATTTTGCAGAAA 60.049 36.000 0.00 0.00 46.71 2.52
2864 6976 5.369685 TCGTCATGCTATTTTGCAGAAAA 57.630 34.783 0.00 0.00 46.71 2.29
2865 6977 5.153513 TCGTCATGCTATTTTGCAGAAAAC 58.846 37.500 0.00 0.00 46.71 2.43
2866 6978 5.048782 TCGTCATGCTATTTTGCAGAAAACT 60.049 36.000 0.00 0.00 46.71 2.66
2867 6979 5.284660 CGTCATGCTATTTTGCAGAAAACTC 59.715 40.000 0.00 0.00 46.71 3.01
2868 6980 5.574443 GTCATGCTATTTTGCAGAAAACTCC 59.426 40.000 0.00 0.00 46.71 3.85
2869 6981 4.519540 TGCTATTTTGCAGAAAACTCCC 57.480 40.909 0.00 0.00 38.12 4.30
2870 6982 4.151883 TGCTATTTTGCAGAAAACTCCCT 58.848 39.130 0.00 0.00 38.12 4.20
2871 6983 4.218417 TGCTATTTTGCAGAAAACTCCCTC 59.782 41.667 0.00 0.00 38.12 4.30
2872 6984 4.218417 GCTATTTTGCAGAAAACTCCCTCA 59.782 41.667 0.00 0.00 33.86 3.86
2873 6985 4.590850 ATTTTGCAGAAAACTCCCTCAC 57.409 40.909 0.00 0.00 33.86 3.51
2874 6986 1.593196 TTGCAGAAAACTCCCTCACG 58.407 50.000 0.00 0.00 0.00 4.35
2875 6987 0.468226 TGCAGAAAACTCCCTCACGT 59.532 50.000 0.00 0.00 0.00 4.49
2876 6988 1.134220 TGCAGAAAACTCCCTCACGTT 60.134 47.619 0.00 0.00 0.00 3.99
2877 6989 1.947456 GCAGAAAACTCCCTCACGTTT 59.053 47.619 0.00 0.00 35.04 3.60
2878 6990 2.031944 GCAGAAAACTCCCTCACGTTTC 60.032 50.000 0.00 0.00 32.60 2.78
2879 6991 3.467803 CAGAAAACTCCCTCACGTTTCT 58.532 45.455 0.00 0.00 32.60 2.52
2880 6992 3.248602 CAGAAAACTCCCTCACGTTTCTG 59.751 47.826 9.34 9.34 32.60 3.02
2881 6993 3.118371 AGAAAACTCCCTCACGTTTCTGT 60.118 43.478 0.00 0.00 32.60 3.41
2882 6994 3.277142 AAACTCCCTCACGTTTCTGTT 57.723 42.857 0.00 0.00 0.00 3.16
2883 6995 4.411256 AAACTCCCTCACGTTTCTGTTA 57.589 40.909 0.00 0.00 0.00 2.41
2884 6996 4.411256 AACTCCCTCACGTTTCTGTTAA 57.589 40.909 0.00 0.00 0.00 2.01
2885 6997 4.618920 ACTCCCTCACGTTTCTGTTAAT 57.381 40.909 0.00 0.00 0.00 1.40
2886 6998 4.566987 ACTCCCTCACGTTTCTGTTAATC 58.433 43.478 0.00 0.00 0.00 1.75
2887 6999 4.039973 ACTCCCTCACGTTTCTGTTAATCA 59.960 41.667 0.00 0.00 0.00 2.57
2888 7000 4.963373 TCCCTCACGTTTCTGTTAATCAA 58.037 39.130 0.00 0.00 0.00 2.57
2889 7001 4.753107 TCCCTCACGTTTCTGTTAATCAAC 59.247 41.667 0.00 0.00 35.06 3.18
2890 7002 4.755123 CCCTCACGTTTCTGTTAATCAACT 59.245 41.667 0.00 0.00 35.56 3.16
2891 7003 5.107065 CCCTCACGTTTCTGTTAATCAACTC 60.107 44.000 0.00 0.00 35.56 3.01
2892 7004 5.388475 CCTCACGTTTCTGTTAATCAACTCG 60.388 44.000 0.00 0.00 35.56 4.18
2893 7005 4.084745 TCACGTTTCTGTTAATCAACTCGC 60.085 41.667 0.00 0.00 35.56 5.03
2894 7006 3.805422 ACGTTTCTGTTAATCAACTCGCA 59.195 39.130 0.00 0.00 35.56 5.10
2895 7007 4.084537 ACGTTTCTGTTAATCAACTCGCAG 60.085 41.667 0.00 0.00 35.56 5.18
2896 7008 4.084537 CGTTTCTGTTAATCAACTCGCAGT 60.085 41.667 0.00 0.00 35.56 4.40
2897 7009 5.374898 GTTTCTGTTAATCAACTCGCAGTC 58.625 41.667 0.00 0.00 35.56 3.51
2898 7010 3.585862 TCTGTTAATCAACTCGCAGTCC 58.414 45.455 0.00 0.00 35.56 3.85
2899 7011 3.006430 TCTGTTAATCAACTCGCAGTCCA 59.994 43.478 0.00 0.00 35.56 4.02
2900 7012 3.064207 TGTTAATCAACTCGCAGTCCAC 58.936 45.455 0.00 0.00 35.56 4.02
2901 7013 3.244078 TGTTAATCAACTCGCAGTCCACT 60.244 43.478 0.00 0.00 35.56 4.00
2902 7014 2.550830 AATCAACTCGCAGTCCACTT 57.449 45.000 0.00 0.00 0.00 3.16
2903 7015 2.550830 ATCAACTCGCAGTCCACTTT 57.449 45.000 0.00 0.00 0.00 2.66
2904 7016 2.325583 TCAACTCGCAGTCCACTTTT 57.674 45.000 0.00 0.00 0.00 2.27
2905 7017 3.462483 TCAACTCGCAGTCCACTTTTA 57.538 42.857 0.00 0.00 0.00 1.52
2906 7018 3.799366 TCAACTCGCAGTCCACTTTTAA 58.201 40.909 0.00 0.00 0.00 1.52
2907 7019 4.193090 TCAACTCGCAGTCCACTTTTAAA 58.807 39.130 0.00 0.00 0.00 1.52
2908 7020 4.819630 TCAACTCGCAGTCCACTTTTAAAT 59.180 37.500 0.00 0.00 0.00 1.40
2909 7021 5.049680 TCAACTCGCAGTCCACTTTTAAATC 60.050 40.000 0.00 0.00 0.00 2.17
2910 7022 4.385825 ACTCGCAGTCCACTTTTAAATCA 58.614 39.130 0.00 0.00 0.00 2.57
2911 7023 4.452455 ACTCGCAGTCCACTTTTAAATCAG 59.548 41.667 0.00 0.00 0.00 2.90
2912 7024 4.385825 TCGCAGTCCACTTTTAAATCAGT 58.614 39.130 0.00 0.00 0.00 3.41
2913 7025 4.819630 TCGCAGTCCACTTTTAAATCAGTT 59.180 37.500 0.00 0.00 0.00 3.16
2914 7026 5.298276 TCGCAGTCCACTTTTAAATCAGTTT 59.702 36.000 0.00 0.00 0.00 2.66
2915 7027 5.977129 CGCAGTCCACTTTTAAATCAGTTTT 59.023 36.000 0.00 0.00 0.00 2.43
2916 7028 6.475402 CGCAGTCCACTTTTAAATCAGTTTTT 59.525 34.615 0.00 0.00 0.00 1.94
2936 7048 5.506730 TTTTGTTTTTCCAGAAAACCCCT 57.493 34.783 5.08 0.00 39.70 4.79
2983 7095 1.875488 ACCAGCCGGAAGTATAACCT 58.125 50.000 5.05 0.00 35.59 3.50
3019 7132 0.895530 TTACTTGAGACCCGGCTGAG 59.104 55.000 0.00 0.00 0.00 3.35
3024 7137 0.039180 TGAGACCCGGCTGAGACTTA 59.961 55.000 0.00 0.00 0.00 2.24
3025 7138 1.183549 GAGACCCGGCTGAGACTTAA 58.816 55.000 0.00 0.00 0.00 1.85
3042 7155 0.892755 TAACGATTCACTGGCGACCT 59.107 50.000 0.00 0.00 0.00 3.85
3433 7557 2.944129 AGCCACAAACAACATGTAGGT 58.056 42.857 0.00 0.00 0.00 3.08
3588 7712 3.779444 TCCTGACACTAAGGACATCTGT 58.221 45.455 0.00 0.00 38.96 3.41
3611 7735 1.340211 TGACAAAACCACGACACCCTT 60.340 47.619 0.00 0.00 0.00 3.95
3612 7736 1.064952 GACAAAACCACGACACCCTTG 59.935 52.381 0.00 0.00 0.00 3.61
3613 7737 1.340211 ACAAAACCACGACACCCTTGA 60.340 47.619 0.00 0.00 0.00 3.02
3614 7738 1.953686 CAAAACCACGACACCCTTGAT 59.046 47.619 0.00 0.00 0.00 2.57
3615 7739 3.142951 CAAAACCACGACACCCTTGATA 58.857 45.455 0.00 0.00 0.00 2.15
3616 7740 3.713826 AAACCACGACACCCTTGATAT 57.286 42.857 0.00 0.00 0.00 1.63
3617 7741 3.713826 AACCACGACACCCTTGATATT 57.286 42.857 0.00 0.00 0.00 1.28
3618 7742 3.713826 ACCACGACACCCTTGATATTT 57.286 42.857 0.00 0.00 0.00 1.40
3619 7743 3.606687 ACCACGACACCCTTGATATTTC 58.393 45.455 0.00 0.00 0.00 2.17
3620 7744 3.263425 ACCACGACACCCTTGATATTTCT 59.737 43.478 0.00 0.00 0.00 2.52
3621 7745 4.468510 ACCACGACACCCTTGATATTTCTA 59.531 41.667 0.00 0.00 0.00 2.10
3622 7746 5.050490 CCACGACACCCTTGATATTTCTAG 58.950 45.833 0.00 0.00 0.00 2.43
3623 7747 5.163447 CCACGACACCCTTGATATTTCTAGA 60.163 44.000 0.00 0.00 0.00 2.43
3624 7748 6.338146 CACGACACCCTTGATATTTCTAGAA 58.662 40.000 0.00 0.00 0.00 2.10
3625 7749 6.816640 CACGACACCCTTGATATTTCTAGAAA 59.183 38.462 19.83 19.83 34.46 2.52
3626 7750 7.495934 CACGACACCCTTGATATTTCTAGAAAT 59.504 37.037 28.75 28.75 42.95 2.17
3627 7751 7.711339 ACGACACCCTTGATATTTCTAGAAATC 59.289 37.037 29.45 19.60 40.99 2.17
3628 7752 7.710907 CGACACCCTTGATATTTCTAGAAATCA 59.289 37.037 29.45 21.67 40.99 2.57
3629 7753 9.396022 GACACCCTTGATATTTCTAGAAATCAA 57.604 33.333 29.45 25.93 40.99 2.57
3630 7754 9.178758 ACACCCTTGATATTTCTAGAAATCAAC 57.821 33.333 29.45 21.46 40.99 3.18
3631 7755 9.401058 CACCCTTGATATTTCTAGAAATCAACT 57.599 33.333 29.45 15.40 40.99 3.16
3632 7756 9.620259 ACCCTTGATATTTCTAGAAATCAACTC 57.380 33.333 29.45 21.36 40.99 3.01
3633 7757 9.618890 CCCTTGATATTTCTAGAAATCAACTCA 57.381 33.333 29.45 23.11 40.99 3.41
3639 7763 9.732130 ATATTTCTAGAAATCAACTCATAGGCC 57.268 33.333 29.45 0.00 40.99 5.19
3640 7764 6.560003 TTCTAGAAATCAACTCATAGGCCA 57.440 37.500 5.01 0.00 0.00 5.36
3641 7765 6.166984 TCTAGAAATCAACTCATAGGCCAG 57.833 41.667 5.01 0.00 0.00 4.85
3642 7766 5.899547 TCTAGAAATCAACTCATAGGCCAGA 59.100 40.000 5.01 0.00 0.00 3.86
3643 7767 5.643421 AGAAATCAACTCATAGGCCAGAT 57.357 39.130 5.01 0.00 0.00 2.90
3644 7768 5.619220 AGAAATCAACTCATAGGCCAGATC 58.381 41.667 5.01 0.00 0.00 2.75
3645 7769 5.369110 AGAAATCAACTCATAGGCCAGATCT 59.631 40.000 5.01 0.00 0.00 2.75
3646 7770 6.556495 AGAAATCAACTCATAGGCCAGATCTA 59.444 38.462 5.01 0.00 0.00 1.98
3647 7771 6.753913 AATCAACTCATAGGCCAGATCTAA 57.246 37.500 5.01 0.00 0.00 2.10
3648 7772 5.798125 TCAACTCATAGGCCAGATCTAAG 57.202 43.478 5.01 0.00 0.00 2.18
3649 7773 5.211973 TCAACTCATAGGCCAGATCTAAGT 58.788 41.667 5.01 0.00 0.00 2.24
3650 7774 5.303078 TCAACTCATAGGCCAGATCTAAGTC 59.697 44.000 5.01 0.00 0.00 3.01
3651 7775 4.809193 ACTCATAGGCCAGATCTAAGTCA 58.191 43.478 5.01 0.00 0.00 3.41
3652 7776 5.211973 ACTCATAGGCCAGATCTAAGTCAA 58.788 41.667 5.01 0.00 0.00 3.18
3653 7777 5.663106 ACTCATAGGCCAGATCTAAGTCAAA 59.337 40.000 5.01 0.00 0.00 2.69
3654 7778 6.328672 ACTCATAGGCCAGATCTAAGTCAAAT 59.671 38.462 5.01 0.00 0.00 2.32
3655 7779 7.141758 TCATAGGCCAGATCTAAGTCAAATT 57.858 36.000 5.01 0.00 0.00 1.82
3656 7780 7.577303 TCATAGGCCAGATCTAAGTCAAATTT 58.423 34.615 5.01 0.00 0.00 1.82
3657 7781 8.055181 TCATAGGCCAGATCTAAGTCAAATTTT 58.945 33.333 5.01 0.00 0.00 1.82
3658 7782 8.689972 CATAGGCCAGATCTAAGTCAAATTTTT 58.310 33.333 5.01 0.00 0.00 1.94
3659 7783 6.928520 AGGCCAGATCTAAGTCAAATTTTTG 58.071 36.000 5.01 0.00 39.48 2.44
3660 7784 5.578336 GGCCAGATCTAAGTCAAATTTTTGC 59.422 40.000 0.00 0.00 38.05 3.68
3661 7785 6.393171 GCCAGATCTAAGTCAAATTTTTGCT 58.607 36.000 0.00 0.00 38.05 3.91
3662 7786 6.870439 GCCAGATCTAAGTCAAATTTTTGCTT 59.130 34.615 0.00 13.36 38.05 3.91
3663 7787 7.386025 GCCAGATCTAAGTCAAATTTTTGCTTT 59.614 33.333 13.78 7.23 38.05 3.51
3664 7788 9.264719 CCAGATCTAAGTCAAATTTTTGCTTTT 57.735 29.630 13.78 5.49 38.05 2.27
3677 7801 1.371183 GCTTTTGCAGGAAACCCCC 59.629 57.895 0.00 0.00 46.58 5.40
3678 7802 1.121407 GCTTTTGCAGGAAACCCCCT 61.121 55.000 0.00 0.00 46.58 4.79
3689 7813 4.724785 ACCCCCTGGTATTTGGGT 57.275 55.556 4.91 4.91 45.45 4.51
3693 7817 3.699025 CCCCCTGGTATTTGGGTTAAT 57.301 47.619 0.00 0.00 41.82 1.40
3694 7818 3.572642 CCCCCTGGTATTTGGGTTAATC 58.427 50.000 0.00 0.00 41.82 1.75
3695 7819 3.052490 CCCCCTGGTATTTGGGTTAATCA 60.052 47.826 0.00 0.00 41.82 2.57
3696 7820 4.573087 CCCCCTGGTATTTGGGTTAATCAA 60.573 45.833 0.00 0.00 41.82 2.57
3697 7821 4.404394 CCCCTGGTATTTGGGTTAATCAAC 59.596 45.833 0.00 0.00 41.82 3.18
3711 7835 6.224420 GTTAATCAACCCGCAGTACATATC 57.776 41.667 0.00 0.00 0.00 1.63
3712 7836 4.415881 AATCAACCCGCAGTACATATCA 57.584 40.909 0.00 0.00 0.00 2.15
3713 7837 3.897141 TCAACCCGCAGTACATATCAA 57.103 42.857 0.00 0.00 0.00 2.57
3714 7838 4.209307 TCAACCCGCAGTACATATCAAA 57.791 40.909 0.00 0.00 0.00 2.69
3715 7839 4.776349 TCAACCCGCAGTACATATCAAAT 58.224 39.130 0.00 0.00 0.00 2.32
3716 7840 4.574421 TCAACCCGCAGTACATATCAAATG 59.426 41.667 0.00 0.00 0.00 2.32
3717 7841 2.878406 ACCCGCAGTACATATCAAATGC 59.122 45.455 0.00 0.00 0.00 3.56
3718 7842 3.141398 CCCGCAGTACATATCAAATGCT 58.859 45.455 0.00 0.00 0.00 3.79
3719 7843 3.565482 CCCGCAGTACATATCAAATGCTT 59.435 43.478 0.00 0.00 0.00 3.91
3720 7844 4.036734 CCCGCAGTACATATCAAATGCTTT 59.963 41.667 0.00 0.00 0.00 3.51
3721 7845 5.450412 CCCGCAGTACATATCAAATGCTTTT 60.450 40.000 0.00 0.00 0.00 2.27
3722 7846 6.238621 CCCGCAGTACATATCAAATGCTTTTA 60.239 38.462 0.00 0.00 0.00 1.52
3723 7847 7.192913 CCGCAGTACATATCAAATGCTTTTAA 58.807 34.615 0.00 0.00 0.00 1.52
3724 7848 7.700234 CCGCAGTACATATCAAATGCTTTTAAA 59.300 33.333 0.00 0.00 0.00 1.52
3725 7849 9.071221 CGCAGTACATATCAAATGCTTTTAAAA 57.929 29.630 0.00 0.00 0.00 1.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
172 176 4.735132 TCTCGCCGGTCGCTTTGG 62.735 66.667 12.56 2.48 38.27 3.28
193 199 1.074951 CCCTTGCTCCGGGTTTTCT 59.925 57.895 0.00 0.00 36.91 2.52
351 364 2.552031 GCAAGTCGATCCTAAACCCTC 58.448 52.381 0.00 0.00 0.00 4.30
570 585 1.590665 CGGAATGGTTTGCATGGCA 59.409 52.632 0.00 0.00 36.47 4.92
586 601 1.910580 TTTGCTTCTAGAGGGGGCGG 61.911 60.000 3.79 0.00 0.00 6.13
626 641 3.242870 GGCTGATGGTTCGTTTGATCATC 60.243 47.826 0.00 0.00 36.50 2.92
628 643 2.083774 GGCTGATGGTTCGTTTGATCA 58.916 47.619 0.00 0.00 0.00 2.92
685 704 1.398451 GGCAAGTGACGTGTTTGATCG 60.398 52.381 0.00 0.00 0.00 3.69
704 723 2.867109 ATCAAGTGGTTCCTCACTGG 57.133 50.000 0.00 0.00 46.17 4.00
736 755 6.093082 GGTCGTACTGCCATTAATTAACACTT 59.907 38.462 0.00 0.00 0.00 3.16
863 916 2.223363 TGAATGACTCATCGACGAGAGC 60.223 50.000 16.55 7.30 36.47 4.09
928 981 2.983433 CGCTAAGCACAGATCCTGG 58.017 57.895 0.00 0.00 35.51 4.45
988 1045 3.765894 TTGGTGTGGTGGCGAGTGG 62.766 63.158 0.00 0.00 0.00 4.00
989 1046 2.203139 TTGGTGTGGTGGCGAGTG 60.203 61.111 0.00 0.00 0.00 3.51
990 1047 2.111043 CTTGGTGTGGTGGCGAGT 59.889 61.111 0.00 0.00 0.00 4.18
991 1048 3.357079 GCTTGGTGTGGTGGCGAG 61.357 66.667 0.00 0.00 0.00 5.03
1194 5165 2.759973 CAGAGCTCCCTGGCGGTA 60.760 66.667 10.93 0.00 37.29 4.02
1583 5599 2.679996 TCTGCTGCTCTGGCCGTA 60.680 61.111 0.00 0.00 37.74 4.02
1584 5600 4.079850 CTCTGCTGCTCTGGCCGT 62.080 66.667 0.00 0.00 37.74 5.68
1686 5750 1.047034 GGCACACGGAGGGGTAGTAT 61.047 60.000 0.00 0.00 0.00 2.12
1688 5752 3.001406 GGCACACGGAGGGGTAGT 61.001 66.667 0.00 0.00 0.00 2.73
1775 5845 1.550976 GATTCAGGAACCACTCGTCCT 59.449 52.381 0.00 0.00 0.00 3.85
1803 5888 1.064611 TGAACCTCGGGTTGGAAAACA 60.065 47.619 12.31 1.86 46.95 2.83
1807 5892 1.133363 TTCTGAACCTCGGGTTGGAA 58.867 50.000 12.31 12.35 46.95 3.53
1808 5893 0.395312 GTTCTGAACCTCGGGTTGGA 59.605 55.000 12.31 8.02 46.95 3.53
1809 5894 0.605589 GGTTCTGAACCTCGGGTTGG 60.606 60.000 28.07 6.18 46.95 3.77
1810 5895 2.928416 GGTTCTGAACCTCGGGTTG 58.072 57.895 28.07 1.01 46.95 3.77
1889 5976 3.058846 CGATCACACGAGTCCGAATCTAT 60.059 47.826 0.00 0.00 39.50 1.98
1897 5984 2.579787 CGGCGATCACACGAGTCC 60.580 66.667 0.00 0.00 35.09 3.85
2085 6179 1.132643 CTATAGTCCCGATGCCTACGC 59.867 57.143 0.00 0.00 0.00 4.42
2090 6184 4.080687 AGTACTTCTATAGTCCCGATGCC 58.919 47.826 0.00 0.00 38.33 4.40
2093 6187 6.873076 CGAGTAAGTACTTCTATAGTCCCGAT 59.127 42.308 12.39 0.00 38.33 4.18
2094 6188 6.040955 TCGAGTAAGTACTTCTATAGTCCCGA 59.959 42.308 12.39 9.27 38.33 5.14
2095 6189 6.219473 TCGAGTAAGTACTTCTATAGTCCCG 58.781 44.000 12.39 7.36 38.33 5.14
2096 6190 7.714813 AGTTCGAGTAAGTACTTCTATAGTCCC 59.285 40.741 12.39 0.00 38.33 4.46
2099 6193 9.835389 ATCAGTTCGAGTAAGTACTTCTATAGT 57.165 33.333 12.39 0.00 41.04 2.12
2101 6195 9.270640 GGATCAGTTCGAGTAAGTACTTCTATA 57.729 37.037 12.39 0.00 36.50 1.31
2102 6196 7.229106 GGGATCAGTTCGAGTAAGTACTTCTAT 59.771 40.741 12.39 0.00 36.50 1.98
2111 6215 2.482142 GGCTGGGATCAGTTCGAGTAAG 60.482 54.545 0.00 0.00 42.78 2.34
2115 6219 0.467384 ATGGCTGGGATCAGTTCGAG 59.533 55.000 0.00 0.00 42.78 4.04
2118 6222 1.105759 GCCATGGCTGGGATCAGTTC 61.106 60.000 29.98 0.00 43.36 3.01
2126 6230 2.541547 TTTCTCTCGCCATGGCTGGG 62.542 60.000 33.07 25.33 43.36 4.45
2198 6304 6.876789 ACGTTGATGTACTTTCATATTGGTCA 59.123 34.615 0.00 0.00 0.00 4.02
2240 6346 0.663568 GTACGTCGCAGTGAGCAACT 60.664 55.000 0.00 0.00 46.13 3.16
2260 6366 3.391955 TCCACTCTTTTAAAACGGAGGGA 59.608 43.478 16.95 16.21 31.52 4.20
2261 6367 3.501062 GTCCACTCTTTTAAAACGGAGGG 59.499 47.826 17.00 14.11 0.00 4.30
2262 6368 4.386711 AGTCCACTCTTTTAAAACGGAGG 58.613 43.478 17.00 11.42 0.00 4.30
2264 6370 4.818005 GGAAGTCCACTCTTTTAAAACGGA 59.182 41.667 0.00 0.00 35.64 4.69
2265 6371 4.577283 TGGAAGTCCACTCTTTTAAAACGG 59.423 41.667 0.00 0.00 42.01 4.44
2266 6372 5.744666 TGGAAGTCCACTCTTTTAAAACG 57.255 39.130 0.00 0.00 42.01 3.60
2279 6385 6.184789 ACTTTCTAACAAAGTTGGAAGTCCA 58.815 36.000 8.35 0.00 45.94 4.02
2280 6386 6.317893 TGACTTTCTAACAAAGTTGGAAGTCC 59.682 38.462 20.96 11.91 40.27 3.85
2281 6387 7.316544 TGACTTTCTAACAAAGTTGGAAGTC 57.683 36.000 19.16 19.16 40.27 3.01
2282 6388 7.393515 AGTTGACTTTCTAACAAAGTTGGAAGT 59.606 33.333 8.35 8.81 40.27 3.01
2283 6389 7.762382 AGTTGACTTTCTAACAAAGTTGGAAG 58.238 34.615 8.35 6.42 40.27 3.46
2284 6390 7.696992 AGTTGACTTTCTAACAAAGTTGGAA 57.303 32.000 4.83 4.83 40.27 3.53
2285 6391 7.696992 AAGTTGACTTTCTAACAAAGTTGGA 57.303 32.000 1.44 0.00 40.27 3.53
2286 6392 8.757164 AAAAGTTGACTTTCTAACAAAGTTGG 57.243 30.769 9.37 0.00 44.69 3.77
2310 6416 6.765036 TGTACACATACGGTCAAACCTAAAAA 59.235 34.615 0.00 0.00 35.66 1.94
2311 6417 6.286758 TGTACACATACGGTCAAACCTAAAA 58.713 36.000 0.00 0.00 35.66 1.52
2312 6418 5.851720 TGTACACATACGGTCAAACCTAAA 58.148 37.500 0.00 0.00 35.66 1.85
2313 6419 5.465532 TGTACACATACGGTCAAACCTAA 57.534 39.130 0.00 0.00 35.66 2.69
2314 6420 5.465532 TTGTACACATACGGTCAAACCTA 57.534 39.130 0.00 0.00 35.66 3.08
2315 6421 4.339872 TTGTACACATACGGTCAAACCT 57.660 40.909 0.00 0.00 35.66 3.50
2316 6422 6.724694 TTATTGTACACATACGGTCAAACC 57.275 37.500 0.00 0.00 33.60 3.27
2317 6423 9.304731 TCTATTATTGTACACATACGGTCAAAC 57.695 33.333 0.00 0.00 33.60 2.93
2318 6424 9.304731 GTCTATTATTGTACACATACGGTCAAA 57.695 33.333 0.00 0.00 33.60 2.69
2319 6425 7.922278 GGTCTATTATTGTACACATACGGTCAA 59.078 37.037 0.00 0.00 33.60 3.18
2320 6426 7.068470 TGGTCTATTATTGTACACATACGGTCA 59.932 37.037 0.00 0.00 33.60 4.02
2321 6427 7.428020 TGGTCTATTATTGTACACATACGGTC 58.572 38.462 0.00 0.00 33.60 4.79
2322 6428 7.350744 TGGTCTATTATTGTACACATACGGT 57.649 36.000 0.00 0.00 33.60 4.83
2323 6429 7.707464 TGTTGGTCTATTATTGTACACATACGG 59.293 37.037 0.00 0.00 33.60 4.02
2324 6430 8.637281 TGTTGGTCTATTATTGTACACATACG 57.363 34.615 0.00 0.00 33.60 3.06
2331 6437 9.893305 GGCATAAATGTTGGTCTATTATTGTAC 57.107 33.333 0.00 0.00 0.00 2.90
2332 6438 9.634021 TGGCATAAATGTTGGTCTATTATTGTA 57.366 29.630 0.00 0.00 0.00 2.41
2333 6439 8.532186 TGGCATAAATGTTGGTCTATTATTGT 57.468 30.769 0.00 0.00 0.00 2.71
2334 6440 9.630098 GATGGCATAAATGTTGGTCTATTATTG 57.370 33.333 0.00 0.00 0.00 1.90
2335 6441 9.365906 TGATGGCATAAATGTTGGTCTATTATT 57.634 29.630 0.00 0.00 0.00 1.40
2336 6442 8.938801 TGATGGCATAAATGTTGGTCTATTAT 57.061 30.769 0.00 0.00 0.00 1.28
2337 6443 8.759481 TTGATGGCATAAATGTTGGTCTATTA 57.241 30.769 0.00 0.00 0.00 0.98
2338 6444 7.658525 TTGATGGCATAAATGTTGGTCTATT 57.341 32.000 0.00 0.00 0.00 1.73
2339 6445 7.658525 TTTGATGGCATAAATGTTGGTCTAT 57.341 32.000 0.00 0.00 0.00 1.98
2340 6446 7.658525 ATTTGATGGCATAAATGTTGGTCTA 57.341 32.000 0.00 0.00 0.00 2.59
2341 6447 5.999205 TTTGATGGCATAAATGTTGGTCT 57.001 34.783 0.00 0.00 0.00 3.85
2342 6448 7.981225 ACTAATTTGATGGCATAAATGTTGGTC 59.019 33.333 0.00 0.00 0.00 4.02
2343 6449 7.850193 ACTAATTTGATGGCATAAATGTTGGT 58.150 30.769 0.00 3.42 0.00 3.67
2344 6450 9.467258 CTACTAATTTGATGGCATAAATGTTGG 57.533 33.333 0.00 2.80 0.00 3.77
2345 6451 8.971321 GCTACTAATTTGATGGCATAAATGTTG 58.029 33.333 0.00 5.40 0.00 3.33
2346 6452 8.694540 TGCTACTAATTTGATGGCATAAATGTT 58.305 29.630 0.00 0.57 0.00 2.71
2347 6453 8.236585 TGCTACTAATTTGATGGCATAAATGT 57.763 30.769 0.00 5.58 0.00 2.71
2348 6454 9.701098 AATGCTACTAATTTGATGGCATAAATG 57.299 29.630 0.00 0.32 37.85 2.32
2351 6457 9.791801 TCTAATGCTACTAATTTGATGGCATAA 57.208 29.630 0.00 0.00 37.85 1.90
2352 6458 9.964354 ATCTAATGCTACTAATTTGATGGCATA 57.036 29.630 0.00 0.00 37.85 3.14
2353 6459 8.874744 ATCTAATGCTACTAATTTGATGGCAT 57.125 30.769 0.00 0.00 40.04 4.40
2354 6460 8.696043 AATCTAATGCTACTAATTTGATGGCA 57.304 30.769 0.00 0.00 32.33 4.92
2355 6461 8.786898 TGAATCTAATGCTACTAATTTGATGGC 58.213 33.333 0.00 0.00 32.33 4.40
2407 6513 5.782047 TCAATGCTTGTGAAACCAAATAGG 58.218 37.500 0.00 0.00 45.67 2.57
2411 6517 9.941325 AAATATATCAATGCTTGTGAAACCAAA 57.059 25.926 0.00 0.00 34.36 3.28
2412 6518 9.941325 AAAATATATCAATGCTTGTGAAACCAA 57.059 25.926 0.00 0.00 34.36 3.67
2413 6519 9.941325 AAAAATATATCAATGCTTGTGAAACCA 57.059 25.926 0.00 0.00 34.36 3.67
2415 6521 9.693157 GCAAAAATATATCAATGCTTGTGAAAC 57.307 29.630 8.52 0.00 37.35 2.78
2416 6522 9.433153 TGCAAAAATATATCAATGCTTGTGAAA 57.567 25.926 14.10 0.00 34.97 2.69
2417 6523 8.871862 GTGCAAAAATATATCAATGCTTGTGAA 58.128 29.630 14.10 0.00 34.97 3.18
2418 6524 8.033626 TGTGCAAAAATATATCAATGCTTGTGA 58.966 29.630 14.10 0.00 34.97 3.58
2419 6525 8.187354 TGTGCAAAAATATATCAATGCTTGTG 57.813 30.769 14.10 0.24 34.97 3.33
2420 6526 8.774890 TTGTGCAAAAATATATCAATGCTTGT 57.225 26.923 14.10 0.00 34.97 3.16
2421 6527 9.480538 GTTTGTGCAAAAATATATCAATGCTTG 57.519 29.630 5.11 0.00 34.97 4.01
2422 6528 9.439500 AGTTTGTGCAAAAATATATCAATGCTT 57.561 25.926 5.11 0.00 34.97 3.91
2423 6529 9.090692 GAGTTTGTGCAAAAATATATCAATGCT 57.909 29.630 5.11 0.00 34.97 3.79
2424 6530 8.051909 CGAGTTTGTGCAAAAATATATCAATGC 58.948 33.333 5.11 8.75 31.33 3.56
2425 6531 8.533965 CCGAGTTTGTGCAAAAATATATCAATG 58.466 33.333 5.11 0.00 31.33 2.82
2426 6532 8.250332 ACCGAGTTTGTGCAAAAATATATCAAT 58.750 29.630 5.11 0.00 31.33 2.57
2427 6533 7.598278 ACCGAGTTTGTGCAAAAATATATCAA 58.402 30.769 5.11 0.00 31.33 2.57
2428 6534 7.094592 TGACCGAGTTTGTGCAAAAATATATCA 60.095 33.333 5.11 4.10 31.33 2.15
2429 6535 7.247728 TGACCGAGTTTGTGCAAAAATATATC 58.752 34.615 5.11 1.66 31.33 1.63
2430 6536 7.151999 TGACCGAGTTTGTGCAAAAATATAT 57.848 32.000 5.11 0.00 31.33 0.86
2431 6537 6.561737 TGACCGAGTTTGTGCAAAAATATA 57.438 33.333 5.11 0.00 31.33 0.86
2432 6538 5.446143 TGACCGAGTTTGTGCAAAAATAT 57.554 34.783 5.11 0.00 31.33 1.28
2433 6539 4.902443 TGACCGAGTTTGTGCAAAAATA 57.098 36.364 5.11 0.00 31.33 1.40
2434 6540 3.791973 TGACCGAGTTTGTGCAAAAAT 57.208 38.095 5.11 0.00 31.33 1.82
2435 6541 3.577649 TTGACCGAGTTTGTGCAAAAA 57.422 38.095 0.00 0.00 31.33 1.94
2436 6542 3.057174 AGTTTGACCGAGTTTGTGCAAAA 60.057 39.130 0.00 0.00 31.33 2.44
2437 6543 2.490115 AGTTTGACCGAGTTTGTGCAAA 59.510 40.909 0.00 0.00 0.00 3.68
2438 6544 2.088423 AGTTTGACCGAGTTTGTGCAA 58.912 42.857 0.00 0.00 0.00 4.08
2439 6545 1.745232 AGTTTGACCGAGTTTGTGCA 58.255 45.000 0.00 0.00 0.00 4.57
2440 6546 2.844122 AAGTTTGACCGAGTTTGTGC 57.156 45.000 0.00 0.00 0.00 4.57
2441 6547 4.094294 TCTCAAAGTTTGACCGAGTTTGTG 59.906 41.667 14.35 1.47 38.17 3.33
2442 6548 4.258543 TCTCAAAGTTTGACCGAGTTTGT 58.741 39.130 14.35 0.00 38.17 2.83
2443 6549 4.875544 TCTCAAAGTTTGACCGAGTTTG 57.124 40.909 14.35 2.86 38.28 2.93
2444 6550 6.289064 ACTATCTCAAAGTTTGACCGAGTTT 58.711 36.000 14.35 0.45 35.46 2.66
2445 6551 5.855045 ACTATCTCAAAGTTTGACCGAGTT 58.145 37.500 14.35 3.34 35.46 3.01
2446 6552 5.470047 ACTATCTCAAAGTTTGACCGAGT 57.530 39.130 14.35 13.26 35.46 4.18
2447 6553 6.787085 AAACTATCTCAAAGTTTGACCGAG 57.213 37.500 14.35 12.69 43.66 4.63
2454 6560 6.004574 GGAGGGTCAAACTATCTCAAAGTTT 58.995 40.000 0.00 0.00 45.64 2.66
2455 6561 5.073144 TGGAGGGTCAAACTATCTCAAAGTT 59.927 40.000 0.00 0.00 38.82 2.66
2456 6562 4.597507 TGGAGGGTCAAACTATCTCAAAGT 59.402 41.667 0.00 0.00 0.00 2.66
2457 6563 5.165961 TGGAGGGTCAAACTATCTCAAAG 57.834 43.478 0.00 0.00 0.00 2.77
2458 6564 5.163141 TGTTGGAGGGTCAAACTATCTCAAA 60.163 40.000 0.00 0.00 0.00 2.69
2459 6565 4.349636 TGTTGGAGGGTCAAACTATCTCAA 59.650 41.667 0.00 0.00 0.00 3.02
2460 6566 3.907474 TGTTGGAGGGTCAAACTATCTCA 59.093 43.478 0.00 0.00 0.00 3.27
2461 6567 4.553330 TGTTGGAGGGTCAAACTATCTC 57.447 45.455 0.00 0.00 0.00 2.75
2462 6568 4.993705 TTGTTGGAGGGTCAAACTATCT 57.006 40.909 0.00 0.00 0.00 1.98
2463 6569 5.070685 ACTTTGTTGGAGGGTCAAACTATC 58.929 41.667 0.00 0.00 0.00 2.08
2464 6570 5.061721 ACTTTGTTGGAGGGTCAAACTAT 57.938 39.130 0.00 0.00 0.00 2.12
2465 6571 4.513406 ACTTTGTTGGAGGGTCAAACTA 57.487 40.909 0.00 0.00 0.00 2.24
2466 6572 3.382083 ACTTTGTTGGAGGGTCAAACT 57.618 42.857 0.00 0.00 0.00 2.66
2467 6573 3.430236 CCAACTTTGTTGGAGGGTCAAAC 60.430 47.826 21.06 0.00 42.06 2.93
2468 6574 2.763448 CCAACTTTGTTGGAGGGTCAAA 59.237 45.455 21.06 0.00 42.06 2.69
2469 6575 2.024846 TCCAACTTTGTTGGAGGGTCAA 60.025 45.455 23.38 4.76 43.17 3.18
2470 6576 1.566703 TCCAACTTTGTTGGAGGGTCA 59.433 47.619 23.38 5.39 43.17 4.02
2471 6577 2.358322 TCCAACTTTGTTGGAGGGTC 57.642 50.000 23.38 0.00 43.17 4.46
2476 6582 4.850680 AGTGTACTTCCAACTTTGTTGGA 58.149 39.130 23.38 23.38 46.08 3.53
2477 6583 4.881850 AGAGTGTACTTCCAACTTTGTTGG 59.118 41.667 19.97 19.97 40.87 3.77
2478 6584 6.436843 AAGAGTGTACTTCCAACTTTGTTG 57.563 37.500 3.69 3.69 0.00 3.33
2479 6585 6.657541 TGAAAGAGTGTACTTCCAACTTTGTT 59.342 34.615 0.00 0.00 0.00 2.83
2480 6586 6.177610 TGAAAGAGTGTACTTCCAACTTTGT 58.822 36.000 0.00 0.00 0.00 2.83
2481 6587 6.677781 TGAAAGAGTGTACTTCCAACTTTG 57.322 37.500 0.00 0.00 0.00 2.77
2482 6588 7.610305 TCTTTGAAAGAGTGTACTTCCAACTTT 59.390 33.333 3.02 0.00 32.71 2.66
2483 6589 7.065923 GTCTTTGAAAGAGTGTACTTCCAACTT 59.934 37.037 8.06 0.00 38.41 2.66
2484 6590 6.539103 GTCTTTGAAAGAGTGTACTTCCAACT 59.461 38.462 8.06 0.00 38.41 3.16
2485 6591 6.509677 CGTCTTTGAAAGAGTGTACTTCCAAC 60.510 42.308 8.06 0.00 38.41 3.77
2486 6592 5.522460 CGTCTTTGAAAGAGTGTACTTCCAA 59.478 40.000 8.06 0.00 38.41 3.53
2487 6593 5.047847 CGTCTTTGAAAGAGTGTACTTCCA 58.952 41.667 8.06 0.00 38.41 3.53
2488 6594 4.448060 CCGTCTTTGAAAGAGTGTACTTCC 59.552 45.833 8.06 0.00 38.41 3.46
2489 6595 4.084485 GCCGTCTTTGAAAGAGTGTACTTC 60.084 45.833 8.06 0.00 38.41 3.01
2490 6596 3.808174 GCCGTCTTTGAAAGAGTGTACTT 59.192 43.478 8.06 0.00 38.41 2.24
2491 6597 3.391049 GCCGTCTTTGAAAGAGTGTACT 58.609 45.455 8.06 0.00 38.41 2.73
2492 6598 2.155155 CGCCGTCTTTGAAAGAGTGTAC 59.845 50.000 8.06 0.00 38.41 2.90
2493 6599 2.400399 CGCCGTCTTTGAAAGAGTGTA 58.600 47.619 8.06 0.00 38.41 2.90
2494 6600 1.217882 CGCCGTCTTTGAAAGAGTGT 58.782 50.000 8.06 0.00 38.41 3.55
2495 6601 0.512952 CCGCCGTCTTTGAAAGAGTG 59.487 55.000 8.06 4.46 38.41 3.51
2496 6602 0.602905 CCCGCCGTCTTTGAAAGAGT 60.603 55.000 8.06 0.00 38.41 3.24
2497 6603 1.298859 CCCCGCCGTCTTTGAAAGAG 61.299 60.000 8.06 0.00 38.41 2.85
2498 6604 1.302192 CCCCGCCGTCTTTGAAAGA 60.302 57.895 3.02 3.02 34.51 2.52
2499 6605 2.332654 CCCCCGCCGTCTTTGAAAG 61.333 63.158 0.00 0.00 0.00 2.62
2500 6606 1.766625 TACCCCCGCCGTCTTTGAAA 61.767 55.000 0.00 0.00 0.00 2.69
2501 6607 2.215625 TACCCCCGCCGTCTTTGAA 61.216 57.895 0.00 0.00 0.00 2.69
2502 6608 2.604079 TACCCCCGCCGTCTTTGA 60.604 61.111 0.00 0.00 0.00 2.69
2503 6609 2.435410 GTACCCCCGCCGTCTTTG 60.435 66.667 0.00 0.00 0.00 2.77
2504 6610 1.844544 ATTGTACCCCCGCCGTCTTT 61.845 55.000 0.00 0.00 0.00 2.52
2505 6611 2.248086 GATTGTACCCCCGCCGTCTT 62.248 60.000 0.00 0.00 0.00 3.01
2506 6612 2.686106 ATTGTACCCCCGCCGTCT 60.686 61.111 0.00 0.00 0.00 4.18
2507 6613 2.202974 GATTGTACCCCCGCCGTC 60.203 66.667 0.00 0.00 0.00 4.79
2508 6614 4.151582 CGATTGTACCCCCGCCGT 62.152 66.667 0.00 0.00 0.00 5.68
2509 6615 3.785189 CTCGATTGTACCCCCGCCG 62.785 68.421 0.00 0.00 0.00 6.46
2510 6616 2.108362 CTCGATTGTACCCCCGCC 59.892 66.667 0.00 0.00 0.00 6.13
2511 6617 2.588034 GCTCGATTGTACCCCCGC 60.588 66.667 0.00 0.00 0.00 6.13
2512 6618 0.391927 TTTGCTCGATTGTACCCCCG 60.392 55.000 0.00 0.00 0.00 5.73
2513 6619 1.828979 TTTTGCTCGATTGTACCCCC 58.171 50.000 0.00 0.00 0.00 5.40
2514 6620 2.415491 GCTTTTTGCTCGATTGTACCCC 60.415 50.000 0.00 0.00 38.95 4.95
2515 6621 2.227865 TGCTTTTTGCTCGATTGTACCC 59.772 45.455 0.00 0.00 43.37 3.69
2516 6622 3.234386 GTGCTTTTTGCTCGATTGTACC 58.766 45.455 0.00 0.00 43.37 3.34
2517 6623 3.884169 TGTGCTTTTTGCTCGATTGTAC 58.116 40.909 0.00 0.00 43.37 2.90
2518 6624 4.764679 ATGTGCTTTTTGCTCGATTGTA 57.235 36.364 0.00 0.00 43.37 2.41
2519 6625 3.648339 ATGTGCTTTTTGCTCGATTGT 57.352 38.095 0.00 0.00 43.37 2.71
2520 6626 3.737266 ACAATGTGCTTTTTGCTCGATTG 59.263 39.130 0.00 0.00 43.37 2.67
2521 6627 3.981211 ACAATGTGCTTTTTGCTCGATT 58.019 36.364 0.00 0.00 43.37 3.34
2522 6628 3.648339 ACAATGTGCTTTTTGCTCGAT 57.352 38.095 0.00 0.00 43.37 3.59
2523 6629 3.435105 AACAATGTGCTTTTTGCTCGA 57.565 38.095 0.00 0.00 43.37 4.04
2524 6630 3.302610 CCAAACAATGTGCTTTTTGCTCG 60.303 43.478 0.00 0.00 43.37 5.03
2525 6631 3.002553 CCCAAACAATGTGCTTTTTGCTC 59.997 43.478 0.00 0.00 43.37 4.26
2526 6632 2.944349 CCCAAACAATGTGCTTTTTGCT 59.056 40.909 0.00 0.00 43.37 3.91
2527 6633 2.682352 ACCCAAACAATGTGCTTTTTGC 59.318 40.909 0.00 0.00 43.25 3.68
2528 6634 3.688673 ACACCCAAACAATGTGCTTTTTG 59.311 39.130 0.00 0.00 33.30 2.44
2529 6635 3.949132 ACACCCAAACAATGTGCTTTTT 58.051 36.364 0.00 0.00 33.30 1.94
2533 6639 3.625649 AAAACACCCAAACAATGTGCT 57.374 38.095 0.00 0.00 33.30 4.40
2721 6833 9.780413 GCTTCCACAAATTTACAAAATGAAAAA 57.220 25.926 0.00 0.00 0.00 1.94
2722 6834 9.171877 AGCTTCCACAAATTTACAAAATGAAAA 57.828 25.926 0.00 0.00 0.00 2.29
2723 6835 8.729805 AGCTTCCACAAATTTACAAAATGAAA 57.270 26.923 0.00 0.00 0.00 2.69
2724 6836 9.255304 GTAGCTTCCACAAATTTACAAAATGAA 57.745 29.630 0.00 0.00 0.00 2.57
2725 6837 7.870445 GGTAGCTTCCACAAATTTACAAAATGA 59.130 33.333 4.19 0.00 0.00 2.57
2726 6838 7.872483 AGGTAGCTTCCACAAATTTACAAAATG 59.128 33.333 12.41 0.00 0.00 2.32
2727 6839 7.962441 AGGTAGCTTCCACAAATTTACAAAAT 58.038 30.769 12.41 0.00 0.00 1.82
2728 6840 7.354751 AGGTAGCTTCCACAAATTTACAAAA 57.645 32.000 12.41 0.00 0.00 2.44
2729 6841 6.969993 AGGTAGCTTCCACAAATTTACAAA 57.030 33.333 12.41 0.00 0.00 2.83
2740 6852 8.141909 ACAAAAAGAAAATAAGGTAGCTTCCAC 58.858 33.333 11.11 0.00 0.00 4.02
2831 6943 7.948278 AAATAGCATGACGAACTAAGGATAC 57.052 36.000 0.00 0.00 0.00 2.24
2832 6944 7.042051 GCAAAATAGCATGACGAACTAAGGATA 60.042 37.037 0.00 0.00 0.00 2.59
2833 6945 6.238484 GCAAAATAGCATGACGAACTAAGGAT 60.238 38.462 0.00 0.00 0.00 3.24
2834 6946 5.064707 GCAAAATAGCATGACGAACTAAGGA 59.935 40.000 0.00 0.00 0.00 3.36
2835 6947 5.163764 TGCAAAATAGCATGACGAACTAAGG 60.164 40.000 0.00 0.00 40.11 2.69
2836 6948 5.868257 TGCAAAATAGCATGACGAACTAAG 58.132 37.500 0.00 0.00 40.11 2.18
2837 6949 5.641636 TCTGCAAAATAGCATGACGAACTAA 59.358 36.000 0.00 0.00 44.68 2.24
2838 6950 5.175127 TCTGCAAAATAGCATGACGAACTA 58.825 37.500 0.00 0.00 44.68 2.24
2839 6951 4.002982 TCTGCAAAATAGCATGACGAACT 58.997 39.130 0.00 0.00 44.68 3.01
2840 6952 4.340894 TCTGCAAAATAGCATGACGAAC 57.659 40.909 0.00 0.00 44.68 3.95
2841 6953 5.369685 TTTCTGCAAAATAGCATGACGAA 57.630 34.783 0.00 0.00 44.68 3.85
2842 6954 5.048782 AGTTTTCTGCAAAATAGCATGACGA 60.049 36.000 0.00 0.00 44.68 4.20
2843 6955 5.156355 AGTTTTCTGCAAAATAGCATGACG 58.844 37.500 0.00 0.00 44.68 4.35
2844 6956 5.574443 GGAGTTTTCTGCAAAATAGCATGAC 59.426 40.000 0.00 0.00 44.68 3.06
2845 6957 5.336690 GGGAGTTTTCTGCAAAATAGCATGA 60.337 40.000 0.00 0.00 44.68 3.07
2846 6958 4.866486 GGGAGTTTTCTGCAAAATAGCATG 59.134 41.667 0.00 0.00 44.68 4.06
2847 6959 4.774200 AGGGAGTTTTCTGCAAAATAGCAT 59.226 37.500 0.00 0.00 44.68 3.79
2848 6960 4.151883 AGGGAGTTTTCTGCAAAATAGCA 58.848 39.130 0.00 0.00 43.35 3.49
2849 6961 4.218417 TGAGGGAGTTTTCTGCAAAATAGC 59.782 41.667 0.00 0.00 40.12 2.97
2850 6962 5.617751 CGTGAGGGAGTTTTCTGCAAAATAG 60.618 44.000 0.00 0.00 40.12 1.73
2851 6963 4.215399 CGTGAGGGAGTTTTCTGCAAAATA 59.785 41.667 0.00 0.00 40.12 1.40
2852 6964 3.004734 CGTGAGGGAGTTTTCTGCAAAAT 59.995 43.478 0.00 0.00 40.12 1.82
2853 6965 2.357637 CGTGAGGGAGTTTTCTGCAAAA 59.642 45.455 0.00 0.00 40.12 2.44
2854 6966 1.946768 CGTGAGGGAGTTTTCTGCAAA 59.053 47.619 0.00 0.00 40.12 3.68
2855 6967 1.134220 ACGTGAGGGAGTTTTCTGCAA 60.134 47.619 0.00 0.00 40.12 4.08
2856 6968 0.468226 ACGTGAGGGAGTTTTCTGCA 59.532 50.000 0.00 0.00 40.12 4.41
2857 6969 1.594331 AACGTGAGGGAGTTTTCTGC 58.406 50.000 0.00 0.00 37.55 4.26
2858 6970 3.248602 CAGAAACGTGAGGGAGTTTTCTG 59.751 47.826 7.72 7.72 40.24 3.02
2859 6971 3.118371 ACAGAAACGTGAGGGAGTTTTCT 60.118 43.478 0.00 0.00 40.24 2.52
2860 6972 3.203716 ACAGAAACGTGAGGGAGTTTTC 58.796 45.455 0.00 0.00 40.24 2.29
2861 6973 3.277142 ACAGAAACGTGAGGGAGTTTT 57.723 42.857 0.00 0.00 40.24 2.43
2862 6974 3.277142 AACAGAAACGTGAGGGAGTTT 57.723 42.857 0.00 0.00 42.50 2.66
2863 6975 4.411256 TTAACAGAAACGTGAGGGAGTT 57.589 40.909 0.00 0.00 0.00 3.01
2864 6976 4.039973 TGATTAACAGAAACGTGAGGGAGT 59.960 41.667 0.00 0.00 0.00 3.85
2865 6977 4.566004 TGATTAACAGAAACGTGAGGGAG 58.434 43.478 0.00 0.00 0.00 4.30
2866 6978 4.610605 TGATTAACAGAAACGTGAGGGA 57.389 40.909 0.00 0.00 0.00 4.20
2867 6979 4.755123 AGTTGATTAACAGAAACGTGAGGG 59.245 41.667 2.93 0.00 39.30 4.30
2868 6980 5.388475 CGAGTTGATTAACAGAAACGTGAGG 60.388 44.000 2.93 0.00 39.30 3.86
2869 6981 5.599715 CGAGTTGATTAACAGAAACGTGAG 58.400 41.667 2.93 0.00 39.30 3.51
2870 6982 4.084745 GCGAGTTGATTAACAGAAACGTGA 60.085 41.667 2.93 0.00 39.30 4.35
2871 6983 4.141680 GCGAGTTGATTAACAGAAACGTG 58.858 43.478 2.93 0.00 39.30 4.49
2872 6984 3.805422 TGCGAGTTGATTAACAGAAACGT 59.195 39.130 2.93 0.00 39.30 3.99
2873 6985 4.084537 ACTGCGAGTTGATTAACAGAAACG 60.085 41.667 2.93 2.33 39.30 3.60
2874 6986 5.344207 ACTGCGAGTTGATTAACAGAAAC 57.656 39.130 2.93 0.00 39.30 2.78
2875 6987 4.451096 GGACTGCGAGTTGATTAACAGAAA 59.549 41.667 2.93 0.00 39.30 2.52
2876 6988 3.994392 GGACTGCGAGTTGATTAACAGAA 59.006 43.478 2.93 0.00 39.30 3.02
2877 6989 3.006430 TGGACTGCGAGTTGATTAACAGA 59.994 43.478 2.93 0.00 39.30 3.41
2878 6990 3.123621 GTGGACTGCGAGTTGATTAACAG 59.876 47.826 2.93 0.00 39.30 3.16
2879 6991 3.064207 GTGGACTGCGAGTTGATTAACA 58.936 45.455 2.93 0.00 39.30 2.41
2880 6992 3.326747 AGTGGACTGCGAGTTGATTAAC 58.673 45.455 0.00 0.00 37.06 2.01
2881 6993 3.678056 AGTGGACTGCGAGTTGATTAA 57.322 42.857 0.00 0.00 0.00 1.40
2882 6994 3.678056 AAGTGGACTGCGAGTTGATTA 57.322 42.857 0.00 0.00 0.00 1.75
2883 6995 2.550830 AAGTGGACTGCGAGTTGATT 57.449 45.000 0.00 0.00 0.00 2.57
2884 6996 2.550830 AAAGTGGACTGCGAGTTGAT 57.449 45.000 0.00 0.00 0.00 2.57
2885 6997 2.325583 AAAAGTGGACTGCGAGTTGA 57.674 45.000 0.00 0.00 0.00 3.18
2886 6998 4.545823 TTTAAAAGTGGACTGCGAGTTG 57.454 40.909 0.00 0.00 0.00 3.16
2887 6999 4.819630 TGATTTAAAAGTGGACTGCGAGTT 59.180 37.500 0.00 0.00 0.00 3.01
2888 7000 4.385825 TGATTTAAAAGTGGACTGCGAGT 58.614 39.130 0.00 0.00 0.00 4.18
2889 7001 4.452455 ACTGATTTAAAAGTGGACTGCGAG 59.548 41.667 0.00 0.00 0.00 5.03
2890 7002 4.385825 ACTGATTTAAAAGTGGACTGCGA 58.614 39.130 0.00 0.00 0.00 5.10
2891 7003 4.749245 ACTGATTTAAAAGTGGACTGCG 57.251 40.909 0.00 0.00 0.00 5.18
2892 7004 7.770801 AAAAACTGATTTAAAAGTGGACTGC 57.229 32.000 0.00 0.00 0.00 4.40
2913 7025 5.882040 AGGGGTTTTCTGGAAAAACAAAAA 58.118 33.333 20.66 0.00 46.76 1.94
2914 7026 5.506730 AGGGGTTTTCTGGAAAAACAAAA 57.493 34.783 20.66 0.00 46.76 2.44
2915 7027 5.506730 AAGGGGTTTTCTGGAAAAACAAA 57.493 34.783 20.66 0.00 46.76 2.83
2916 7028 5.221945 ACAAAGGGGTTTTCTGGAAAAACAA 60.222 36.000 20.66 0.00 46.76 2.83
2917 7029 4.287326 ACAAAGGGGTTTTCTGGAAAAACA 59.713 37.500 20.66 0.00 46.76 2.83
2918 7030 4.839121 ACAAAGGGGTTTTCTGGAAAAAC 58.161 39.130 13.55 13.55 44.84 2.43
2919 7031 4.382147 CGACAAAGGGGTTTTCTGGAAAAA 60.382 41.667 9.65 0.00 41.37 1.94
2920 7032 3.131400 CGACAAAGGGGTTTTCTGGAAAA 59.869 43.478 4.61 4.61 37.90 2.29
2921 7033 2.691011 CGACAAAGGGGTTTTCTGGAAA 59.309 45.455 0.00 0.00 0.00 3.13
2922 7034 2.303175 CGACAAAGGGGTTTTCTGGAA 58.697 47.619 0.00 0.00 0.00 3.53
2923 7035 1.477923 CCGACAAAGGGGTTTTCTGGA 60.478 52.381 0.00 0.00 0.00 3.86
2924 7036 0.958822 CCGACAAAGGGGTTTTCTGG 59.041 55.000 0.00 0.00 0.00 3.86
2967 7079 0.468648 GCCAGGTTATACTTCCGGCT 59.531 55.000 0.00 0.00 38.93 5.52
3019 7132 2.344741 GTCGCCAGTGAATCGTTAAGTC 59.655 50.000 0.00 0.00 0.00 3.01
3024 7137 0.670546 CAGGTCGCCAGTGAATCGTT 60.671 55.000 0.00 0.00 0.00 3.85
3025 7138 1.079819 CAGGTCGCCAGTGAATCGT 60.080 57.895 0.00 0.00 0.00 3.73
3108 7221 0.898320 CTTGTCATCCGTCTGTCCCT 59.102 55.000 0.00 0.00 0.00 4.20
3210 7325 4.684484 GGATACAAGTCCGGGTCTTTAT 57.316 45.455 0.00 7.83 0.00 1.40
3280 7396 1.645402 ATGTTGAAGGGGCGGGCTAT 61.645 55.000 0.26 0.00 0.00 2.97
3283 7399 0.109723 TATATGTTGAAGGGGCGGGC 59.890 55.000 0.00 0.00 0.00 6.13
3433 7557 3.759618 GGGAAACATCATCCGGTAACAAA 59.240 43.478 0.00 0.00 37.87 2.83
3613 7737 9.732130 GGCCTATGAGTTGATTTCTAGAAATAT 57.268 33.333 26.76 18.39 40.77 1.28
3614 7738 8.713971 TGGCCTATGAGTTGATTTCTAGAAATA 58.286 33.333 26.76 12.67 40.77 1.40
3615 7739 7.577303 TGGCCTATGAGTTGATTTCTAGAAAT 58.423 34.615 26.98 26.98 43.14 2.17
3616 7740 6.957631 TGGCCTATGAGTTGATTTCTAGAAA 58.042 36.000 19.83 19.83 34.46 2.52
3617 7741 6.384015 TCTGGCCTATGAGTTGATTTCTAGAA 59.616 38.462 3.32 0.00 0.00 2.10
3618 7742 5.899547 TCTGGCCTATGAGTTGATTTCTAGA 59.100 40.000 3.32 0.00 0.00 2.43
3619 7743 6.166984 TCTGGCCTATGAGTTGATTTCTAG 57.833 41.667 3.32 0.00 0.00 2.43
3620 7744 6.556495 AGATCTGGCCTATGAGTTGATTTCTA 59.444 38.462 3.32 0.00 0.00 2.10
3621 7745 5.369110 AGATCTGGCCTATGAGTTGATTTCT 59.631 40.000 3.32 0.00 0.00 2.52
3622 7746 5.619220 AGATCTGGCCTATGAGTTGATTTC 58.381 41.667 3.32 0.00 0.00 2.17
3623 7747 5.643421 AGATCTGGCCTATGAGTTGATTT 57.357 39.130 3.32 0.00 0.00 2.17
3624 7748 6.328672 ACTTAGATCTGGCCTATGAGTTGATT 59.671 38.462 5.18 0.00 0.00 2.57
3625 7749 5.843421 ACTTAGATCTGGCCTATGAGTTGAT 59.157 40.000 5.18 0.00 0.00 2.57
3626 7750 5.211973 ACTTAGATCTGGCCTATGAGTTGA 58.788 41.667 5.18 0.00 0.00 3.18
3627 7751 5.069648 TGACTTAGATCTGGCCTATGAGTTG 59.930 44.000 5.18 0.00 0.00 3.16
3628 7752 5.211973 TGACTTAGATCTGGCCTATGAGTT 58.788 41.667 5.18 0.00 0.00 3.01
3629 7753 4.809193 TGACTTAGATCTGGCCTATGAGT 58.191 43.478 5.18 0.00 0.00 3.41
3630 7754 5.798125 TTGACTTAGATCTGGCCTATGAG 57.202 43.478 5.18 0.00 0.00 2.90
3631 7755 6.753913 ATTTGACTTAGATCTGGCCTATGA 57.246 37.500 5.18 0.00 0.00 2.15
3632 7756 7.814264 AAATTTGACTTAGATCTGGCCTATG 57.186 36.000 5.18 0.00 0.00 2.23
3633 7757 8.689972 CAAAAATTTGACTTAGATCTGGCCTAT 58.310 33.333 5.18 0.00 40.55 2.57
3634 7758 7.362920 GCAAAAATTTGACTTAGATCTGGCCTA 60.363 37.037 5.18 0.00 40.55 3.93
3635 7759 6.573094 GCAAAAATTTGACTTAGATCTGGCCT 60.573 38.462 5.18 0.00 40.55 5.19
3636 7760 5.578336 GCAAAAATTTGACTTAGATCTGGCC 59.422 40.000 5.18 0.00 40.55 5.36
3637 7761 6.393171 AGCAAAAATTTGACTTAGATCTGGC 58.607 36.000 5.18 0.00 40.55 4.85
3638 7762 8.822652 AAAGCAAAAATTTGACTTAGATCTGG 57.177 30.769 5.18 0.50 40.55 3.86
3640 7764 8.768019 GCAAAAGCAAAAATTTGACTTAGATCT 58.232 29.630 9.96 0.00 40.55 2.75
3641 7765 8.550376 TGCAAAAGCAAAAATTTGACTTAGATC 58.450 29.630 9.96 0.00 40.55 2.75
3642 7766 8.436046 TGCAAAAGCAAAAATTTGACTTAGAT 57.564 26.923 9.96 1.94 40.55 1.98
3643 7767 7.011295 CCTGCAAAAGCAAAAATTTGACTTAGA 59.989 33.333 9.96 0.00 40.55 2.10
3644 7768 7.011295 TCCTGCAAAAGCAAAAATTTGACTTAG 59.989 33.333 9.96 9.27 40.55 2.18
3645 7769 6.820656 TCCTGCAAAAGCAAAAATTTGACTTA 59.179 30.769 9.96 0.00 40.55 2.24
3646 7770 5.647225 TCCTGCAAAAGCAAAAATTTGACTT 59.353 32.000 9.96 9.19 40.55 3.01
3647 7771 5.184711 TCCTGCAAAAGCAAAAATTTGACT 58.815 33.333 9.96 4.01 40.55 3.41
3648 7772 5.482686 TCCTGCAAAAGCAAAAATTTGAC 57.517 34.783 9.96 1.89 40.55 3.18
3649 7773 6.320944 GTTTCCTGCAAAAGCAAAAATTTGA 58.679 32.000 9.96 0.00 40.55 2.69
3650 7774 5.515982 GGTTTCCTGCAAAAGCAAAAATTTG 59.484 36.000 7.93 1.52 41.03 2.32
3651 7775 5.394005 GGGTTTCCTGCAAAAGCAAAAATTT 60.394 36.000 13.42 0.00 38.15 1.82
3652 7776 4.097741 GGGTTTCCTGCAAAAGCAAAAATT 59.902 37.500 13.42 0.00 38.15 1.82
3653 7777 3.631686 GGGTTTCCTGCAAAAGCAAAAAT 59.368 39.130 13.42 0.00 38.15 1.82
3654 7778 3.013219 GGGTTTCCTGCAAAAGCAAAAA 58.987 40.909 13.42 0.00 38.15 1.94
3655 7779 2.637947 GGGTTTCCTGCAAAAGCAAAA 58.362 42.857 13.42 0.00 38.15 2.44
3656 7780 1.134250 GGGGTTTCCTGCAAAAGCAAA 60.134 47.619 13.42 0.00 38.15 3.68
3657 7781 0.467804 GGGGTTTCCTGCAAAAGCAA 59.532 50.000 13.42 0.00 38.15 3.91
3658 7782 1.406860 GGGGGTTTCCTGCAAAAGCA 61.407 55.000 13.42 0.00 38.15 3.91
3659 7783 1.121407 AGGGGGTTTCCTGCAAAAGC 61.121 55.000 4.79 4.79 35.47 3.51
3660 7784 0.681175 CAGGGGGTTTCCTGCAAAAG 59.319 55.000 0.00 0.00 46.47 2.27
3661 7785 2.833244 CAGGGGGTTTCCTGCAAAA 58.167 52.632 0.00 0.00 46.47 2.44
3662 7786 4.617200 CAGGGGGTTTCCTGCAAA 57.383 55.556 0.00 0.00 46.47 3.68
3688 7812 5.756347 TGATATGTACTGCGGGTTGATTAAC 59.244 40.000 0.00 0.00 36.04 2.01
3689 7813 5.919755 TGATATGTACTGCGGGTTGATTAA 58.080 37.500 0.00 0.00 0.00 1.40
3690 7814 5.538849 TGATATGTACTGCGGGTTGATTA 57.461 39.130 0.00 0.00 0.00 1.75
3691 7815 4.415881 TGATATGTACTGCGGGTTGATT 57.584 40.909 0.00 0.00 0.00 2.57
3692 7816 4.415881 TTGATATGTACTGCGGGTTGAT 57.584 40.909 0.00 0.00 0.00 2.57
3693 7817 3.897141 TTGATATGTACTGCGGGTTGA 57.103 42.857 0.00 0.00 0.00 3.18
3694 7818 4.789481 GCATTTGATATGTACTGCGGGTTG 60.789 45.833 0.00 0.00 0.00 3.77
3695 7819 3.315191 GCATTTGATATGTACTGCGGGTT 59.685 43.478 0.00 0.00 0.00 4.11
3696 7820 2.878406 GCATTTGATATGTACTGCGGGT 59.122 45.455 0.00 0.00 0.00 5.28
3697 7821 3.141398 AGCATTTGATATGTACTGCGGG 58.859 45.455 0.00 0.00 34.89 6.13
3698 7822 4.818534 AAGCATTTGATATGTACTGCGG 57.181 40.909 0.00 0.00 34.89 5.69
3699 7823 8.613613 TTTAAAAGCATTTGATATGTACTGCG 57.386 30.769 0.00 0.00 39.02 5.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.