Multiple sequence alignment - TraesCS1D01G417100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G417100 chr1D 100.000 5632 0 0 1 5632 475515777 475521408 0.000000e+00 10401.0
1 TraesCS1D01G417100 chr1D 92.357 471 19 5 5176 5632 12360084 12359617 0.000000e+00 654.0
2 TraesCS1D01G417100 chr1D 91.447 304 15 3 1925 2219 254438223 254438524 1.890000e-109 407.0
3 TraesCS1D01G417100 chr1D 90.523 306 18 3 1925 2221 461637650 461637347 1.470000e-105 394.0
4 TraesCS1D01G417100 chr1D 90.196 306 20 2 1925 2221 51868755 51868451 1.900000e-104 390.0
5 TraesCS1D01G417100 chr1D 87.402 254 18 1 5176 5415 6491898 6491645 4.300000e-71 279.0
6 TraesCS1D01G417100 chr1D 90.270 185 8 2 1925 2100 68407556 68407373 3.390000e-57 233.0
7 TraesCS1D01G417100 chr1D 87.654 162 10 3 1925 2077 25920260 25920100 4.480000e-41 180.0
8 TraesCS1D01G417100 chr1D 100.000 42 0 0 1764 1805 475517302 475517343 1.680000e-10 78.7
9 TraesCS1D01G417100 chr1D 100.000 42 0 0 1526 1567 475517540 475517581 1.680000e-10 78.7
10 TraesCS1D01G417100 chr1A 95.264 2977 92 23 2221 5175 571288883 571291832 0.000000e+00 4671.0
11 TraesCS1D01G417100 chr1A 92.279 816 37 18 1 812 571286843 571287636 0.000000e+00 1134.0
12 TraesCS1D01G417100 chr1A 92.569 471 21 8 1457 1924 571288415 571288874 0.000000e+00 664.0
13 TraesCS1D01G417100 chr1A 89.858 493 41 3 924 1415 571287628 571288112 4.790000e-175 625.0
14 TraesCS1D01G417100 chr1A 91.176 306 17 2 1925 2221 554475123 554474819 1.890000e-109 407.0
15 TraesCS1D01G417100 chr1A 85.260 346 30 12 828 1167 170109981 170110311 2.510000e-88 337.0
16 TraesCS1D01G417100 chr1A 93.506 77 5 0 1926 2002 261723031 261723107 1.280000e-21 115.0
17 TraesCS1D01G417100 chr1A 97.619 42 1 0 1526 1567 571288714 571288755 7.830000e-09 73.1
18 TraesCS1D01G417100 chr1B 94.425 2870 108 21 2221 5054 661514627 661517480 0.000000e+00 4366.0
19 TraesCS1D01G417100 chr1B 90.000 1280 57 20 687 1924 661513368 661514618 0.000000e+00 1589.0
20 TraesCS1D01G417100 chr1B 86.557 305 21 7 149 444 661512927 661513220 9.110000e-83 318.0
21 TraesCS1D01G417100 chr1B 97.619 42 1 0 1526 1567 661514458 661514499 7.830000e-09 73.1
22 TraesCS1D01G417100 chr3D 93.803 468 13 4 5179 5632 85233472 85233007 0.000000e+00 689.0
23 TraesCS1D01G417100 chr3D 92.537 469 21 3 5178 5632 11281125 11280657 0.000000e+00 660.0
24 TraesCS1D01G417100 chr3D 90.385 468 15 7 5179 5632 359629775 359629324 6.290000e-164 588.0
25 TraesCS1D01G417100 chr6D 93.333 465 15 4 5179 5629 306311066 306311528 0.000000e+00 673.0
26 TraesCS1D01G417100 chr6D 92.704 466 17 6 5179 5629 29961877 29962340 0.000000e+00 656.0
27 TraesCS1D01G417100 chr6D 92.308 468 20 5 5179 5632 51506754 51506289 0.000000e+00 651.0
28 TraesCS1D01G417100 chr6D 88.462 260 16 1 5177 5422 306318201 306317942 9.170000e-78 302.0
29 TraesCS1D01G417100 chr6D 96.226 53 2 0 2108 2160 332189254 332189306 2.800000e-13 87.9
30 TraesCS1D01G417100 chr5D 92.918 466 19 8 5178 5629 408326952 408327417 0.000000e+00 665.0
31 TraesCS1D01G417100 chr5D 92.473 465 19 4 5179 5629 244406985 244407447 0.000000e+00 651.0
32 TraesCS1D01G417100 chr5D 91.176 306 16 3 1925 2221 6173745 6173442 6.790000e-109 405.0
33 TraesCS1D01G417100 chr5D 92.096 291 12 3 1925 2206 503295062 503295350 3.160000e-107 399.0
34 TraesCS1D01G417100 chr5D 92.830 265 8 3 1925 2180 180823257 180823519 1.920000e-99 374.0
35 TraesCS1D01G417100 chr5D 86.127 346 28 11 828 1167 433038858 433039189 6.940000e-94 355.0
36 TraesCS1D01G417100 chr7D 91.966 473 20 4 5173 5629 54576494 54576964 0.000000e+00 647.0
37 TraesCS1D01G417100 chr2D 93.034 445 17 9 5197 5627 634815066 634815510 6.150000e-179 638.0
38 TraesCS1D01G417100 chr2D 89.540 478 21 3 5166 5629 182625215 182625677 3.780000e-161 579.0
39 TraesCS1D01G417100 chr2D 92.784 291 10 3 1925 2206 628293638 628293350 1.460000e-110 411.0
40 TraesCS1D01G417100 chr2D 92.096 291 12 3 1925 2206 638427692 638427980 3.160000e-107 399.0
41 TraesCS1D01G417100 chr2D 95.349 86 4 0 5178 5263 578923792 578923877 2.740000e-28 137.0
42 TraesCS1D01G417100 chr2D 91.753 97 6 2 5167 5263 126835784 126835878 3.540000e-27 134.0
43 TraesCS1D01G417100 chrUn 91.503 306 16 2 1925 2221 425346964 425346660 4.060000e-111 412.0
44 TraesCS1D01G417100 chr6B 91.531 307 15 3 1925 2221 450076621 450076926 4.060000e-111 412.0
45 TraesCS1D01G417100 chr6B 82.716 405 40 10 780 1167 584239229 584239620 3.250000e-87 333.0
46 TraesCS1D01G417100 chr6B 84.866 337 31 10 837 1167 64118831 64118509 7.040000e-84 322.0
47 TraesCS1D01G417100 chr4B 91.176 306 17 2 1925 2221 308676579 308676275 1.890000e-109 407.0
48 TraesCS1D01G417100 chr7A 83.210 405 38 9 780 1167 601862816 601862425 1.500000e-90 344.0
49 TraesCS1D01G417100 chr7A 91.566 166 5 1 1925 2081 251849171 251849006 2.640000e-53 220.0
50 TraesCS1D01G417100 chr4D 90.734 259 10 1 5178 5422 428529858 428530116 3.250000e-87 333.0
51 TraesCS1D01G417100 chr4D 95.402 174 7 1 2033 2206 19871809 19871981 5.560000e-70 276.0
52 TraesCS1D01G417100 chr4D 95.349 86 4 0 1932 2017 447148224 447148139 2.740000e-28 137.0
53 TraesCS1D01G417100 chr4D 87.826 115 2 2 1956 2059 509679645 509679532 2.130000e-24 124.0
54 TraesCS1D01G417100 chr4D 91.111 90 8 0 1928 2017 207065093 207065004 7.660000e-24 122.0
55 TraesCS1D01G417100 chr4A 81.728 405 42 11 780 1167 418427663 418427274 5.480000e-80 309.0
56 TraesCS1D01G417100 chr5A 90.476 189 8 2 1925 2104 34952585 34952772 2.030000e-59 241.0
57 TraesCS1D01G417100 chr5A 87.097 186 10 1 5178 5349 700598126 700598311 1.240000e-46 198.0
58 TraesCS1D01G417100 chr6A 91.919 99 8 0 2108 2206 248917006 248917104 7.610000e-29 139.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G417100 chr1D 475515777 475521408 5631 False 10401.000 10401 100.00000 1 5632 1 chr1D.!!$F2 5631
1 TraesCS1D01G417100 chr1A 571286843 571291832 4989 False 1433.420 4671 93.51780 1 5175 5 chr1A.!!$F3 5174
2 TraesCS1D01G417100 chr1B 661512927 661517480 4553 False 1586.525 4366 92.15025 149 5054 4 chr1B.!!$F1 4905

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
505 560 0.110486 CTGCTGTGTTTGGGGGTACT 59.890 55.0 0.0 0.0 0.0 2.73 F
506 561 0.179004 TGCTGTGTTTGGGGGTACTG 60.179 55.0 0.0 0.0 0.0 2.74 F
1680 2038 0.179081 GTCATCCACCTCCGCCTTAC 60.179 60.0 0.0 0.0 0.0 2.34 F
1977 2335 0.319900 CGTAAGTGTGCCAGACTGCT 60.320 55.0 0.0 0.0 0.0 4.24 F
2120 2478 0.474184 CCCCATTAAGTCCGAGCCAT 59.526 55.0 0.0 0.0 0.0 4.40 F
3467 3845 0.532862 CCAGACACAGAAGCAACCGT 60.533 55.0 0.0 0.0 0.0 4.83 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1674 2032 0.107165 GAGGACCCCACATGTAAGGC 60.107 60.000 12.2 0.21 0.00 4.35 R
1954 2312 0.317479 GTCTGGCACACTTACGTCCT 59.683 55.000 0.0 0.00 0.00 3.85 R
3588 3966 1.819632 CGGTGTGCCTATTGCCCTC 60.820 63.158 0.0 0.00 40.16 4.30 R
4037 4428 2.945668 GTCCATGTTTCCAGATACTGCC 59.054 50.000 0.0 0.00 0.00 4.85 R
4060 4451 4.098416 GGAGAAAATTCAATTCGGCTTCG 58.902 43.478 0.0 0.00 32.04 3.79 R
5436 5843 0.030638 GAGAGAGAGATGCTGCCGAC 59.969 60.000 0.0 0.00 0.00 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
54 55 3.366739 GAATTCCCCGAGCGTCCGT 62.367 63.158 0.00 0.00 0.00 4.69
55 56 3.366739 AATTCCCCGAGCGTCCGTC 62.367 63.158 0.00 0.00 0.00 4.79
125 126 4.830765 CGCCTCGCCGGGAATTGA 62.831 66.667 2.18 0.00 0.00 2.57
180 181 1.638589 TGAATCCCCTCCGATTTTGGT 59.361 47.619 0.00 0.00 32.56 3.67
209 210 0.321919 TCCTGTGCGTACGTAGGAGT 60.322 55.000 24.36 0.00 34.54 3.85
210 211 0.179171 CCTGTGCGTACGTAGGAGTG 60.179 60.000 22.53 5.48 31.91 3.51
211 212 0.797249 CTGTGCGTACGTAGGAGTGC 60.797 60.000 18.91 7.90 0.00 4.40
227 228 3.449632 GAGTGCTAGTCGAATTCCCTTC 58.550 50.000 0.00 0.00 0.00 3.46
358 359 1.024579 CGTTCGAGATTGGTTGGGGG 61.025 60.000 0.00 0.00 0.00 5.40
421 431 1.322442 GCTGCTTCTCTGGGTTGTTT 58.678 50.000 0.00 0.00 0.00 2.83
478 533 1.180029 GATGCATTTGTGTCTGGGCT 58.820 50.000 0.00 0.00 0.00 5.19
501 556 1.457455 AACCTGCTGTGTTTGGGGG 60.457 57.895 0.00 0.00 0.00 5.40
502 557 2.198426 CCTGCTGTGTTTGGGGGT 59.802 61.111 0.00 0.00 0.00 4.95
503 558 1.357272 ACCTGCTGTGTTTGGGGGTA 61.357 55.000 0.00 0.00 0.00 3.69
504 559 0.893727 CCTGCTGTGTTTGGGGGTAC 60.894 60.000 0.00 0.00 0.00 3.34
505 560 0.110486 CTGCTGTGTTTGGGGGTACT 59.890 55.000 0.00 0.00 0.00 2.73
506 561 0.179004 TGCTGTGTTTGGGGGTACTG 60.179 55.000 0.00 0.00 0.00 2.74
509 564 2.661718 CTGTGTTTGGGGGTACTGTTT 58.338 47.619 0.00 0.00 0.00 2.83
510 565 2.621526 CTGTGTTTGGGGGTACTGTTTC 59.378 50.000 0.00 0.00 0.00 2.78
511 566 2.025226 TGTGTTTGGGGGTACTGTTTCA 60.025 45.455 0.00 0.00 0.00 2.69
527 582 4.394712 CACCCGGCACCTCTGACC 62.395 72.222 0.00 0.00 0.00 4.02
531 586 4.135153 CGGCACCTCTGACCTCCG 62.135 72.222 0.00 0.00 0.00 4.63
564 619 5.725325 ACTCTTTCTTCTAGCGGTAGTTT 57.275 39.130 20.32 0.00 0.00 2.66
573 628 0.310854 AGCGGTAGTTTGCACTTTGC 59.689 50.000 0.00 0.00 45.29 3.68
603 658 3.997681 GGAAACTCTCTTCCTTTCTTCCG 59.002 47.826 0.00 0.00 41.56 4.30
609 664 3.055819 TCTCTTCCTTTCTTCCGGTGATG 60.056 47.826 0.00 0.00 0.00 3.07
624 679 2.158971 GGTGATGGTTTGCACTTTGGTT 60.159 45.455 0.00 0.00 35.43 3.67
625 680 2.865551 GTGATGGTTTGCACTTTGGTTG 59.134 45.455 0.00 0.00 32.44 3.77
627 682 1.270907 TGGTTTGCACTTTGGTTGGT 58.729 45.000 0.00 0.00 0.00 3.67
628 683 1.066573 TGGTTTGCACTTTGGTTGGTG 60.067 47.619 0.00 0.00 36.62 4.17
630 685 1.999024 GTTTGCACTTTGGTTGGTGTG 59.001 47.619 0.00 0.00 36.03 3.82
631 686 1.550327 TTGCACTTTGGTTGGTGTGA 58.450 45.000 0.00 0.00 36.03 3.58
663 718 2.766313 TCAGAATTCTGGAACACCACG 58.234 47.619 30.33 5.78 43.91 4.94
679 734 1.474320 CCACGGTGTCTGTTTTCAGGA 60.474 52.381 7.45 0.00 46.94 3.86
684 739 2.814336 GGTGTCTGTTTTCAGGATCACC 59.186 50.000 15.34 15.34 46.94 4.02
804 870 1.564348 ACTCTGGTTGGTTGGTTCTGT 59.436 47.619 0.00 0.00 0.00 3.41
809 881 0.869880 GTTGGTTGGTTCTGTTGCGC 60.870 55.000 0.00 0.00 0.00 6.09
839 922 9.202273 GAAATAATTTGCCAGTATGTGTCAAAA 57.798 29.630 0.00 0.00 31.55 2.44
864 947 7.889469 ACTCACTTTTGATGAAAACTGCATAT 58.111 30.769 0.00 0.00 0.00 1.78
865 948 8.362639 ACTCACTTTTGATGAAAACTGCATATT 58.637 29.630 0.00 0.00 0.00 1.28
879 962 1.068748 GCATATTGCAAGGGAGATGCG 60.069 52.381 4.94 0.00 46.76 4.73
896 979 3.328382 TGCGCTACAGGTTTATTGTCT 57.672 42.857 9.73 0.00 0.00 3.41
920 1003 1.112113 TGCTACGGAATCTCTCACCC 58.888 55.000 0.00 0.00 0.00 4.61
945 1032 0.684153 ATGCCCGGACCCATGAAAAG 60.684 55.000 0.73 0.00 0.00 2.27
986 1073 7.441458 AGCTTACTTCACCTGTACTTTTAGTTG 59.559 37.037 0.00 0.00 0.00 3.16
1151 1244 2.936498 CTGATTTACAAGTACCCGCTGG 59.064 50.000 0.00 0.00 37.80 4.85
1163 1256 1.750930 CCGCTGGCCACTGAGATAT 59.249 57.895 0.00 0.00 0.00 1.63
1176 1269 5.065731 CCACTGAGATATTGCCTTCAAAGAC 59.934 44.000 0.00 0.00 35.56 3.01
1197 1291 6.706295 AGACAGGAAACTCTGATTTAAGAGG 58.294 40.000 6.21 0.00 46.73 3.69
1352 1446 3.189287 CAGCAAAGAACACCACTGGTATC 59.811 47.826 0.00 2.85 32.11 2.24
1391 1485 1.438651 TATGCAGTGTCGTTGCCTTC 58.561 50.000 0.00 0.00 40.81 3.46
1415 1509 1.732259 GCCTGTCAATACAACTCACCG 59.268 52.381 0.00 0.00 34.49 4.94
1416 1510 2.346803 CCTGTCAATACAACTCACCGG 58.653 52.381 0.00 0.00 34.49 5.28
1417 1511 2.346803 CTGTCAATACAACTCACCGGG 58.653 52.381 6.32 0.00 34.49 5.73
1418 1512 1.972075 TGTCAATACAACTCACCGGGA 59.028 47.619 6.32 0.00 30.91 5.14
1419 1513 2.369203 TGTCAATACAACTCACCGGGAA 59.631 45.455 6.32 0.00 30.91 3.97
1420 1514 3.008594 TGTCAATACAACTCACCGGGAAT 59.991 43.478 6.32 0.00 30.91 3.01
1421 1515 4.007659 GTCAATACAACTCACCGGGAATT 58.992 43.478 6.32 0.00 0.00 2.17
1422 1516 4.457949 GTCAATACAACTCACCGGGAATTT 59.542 41.667 6.32 0.00 0.00 1.82
1423 1517 5.048294 GTCAATACAACTCACCGGGAATTTT 60.048 40.000 6.32 0.00 0.00 1.82
1424 1518 5.182380 TCAATACAACTCACCGGGAATTTTC 59.818 40.000 6.32 0.00 0.00 2.29
1425 1519 2.938838 ACAACTCACCGGGAATTTTCA 58.061 42.857 6.32 0.00 0.00 2.69
1426 1520 3.496331 ACAACTCACCGGGAATTTTCAT 58.504 40.909 6.32 0.00 0.00 2.57
1427 1521 4.658063 ACAACTCACCGGGAATTTTCATA 58.342 39.130 6.32 0.00 0.00 2.15
1428 1522 5.261216 ACAACTCACCGGGAATTTTCATAT 58.739 37.500 6.32 0.00 0.00 1.78
1429 1523 5.125417 ACAACTCACCGGGAATTTTCATATG 59.875 40.000 6.32 0.00 0.00 1.78
1430 1524 4.855340 ACTCACCGGGAATTTTCATATGT 58.145 39.130 6.32 0.00 0.00 2.29
1431 1525 4.640201 ACTCACCGGGAATTTTCATATGTG 59.360 41.667 6.32 0.00 0.00 3.21
1532 1887 2.612212 TGAGTGTTTTGCCGTTCTCTTC 59.388 45.455 0.00 0.00 0.00 2.87
1533 1888 2.612212 GAGTGTTTTGCCGTTCTCTTCA 59.388 45.455 0.00 0.00 0.00 3.02
1535 1890 3.251004 AGTGTTTTGCCGTTCTCTTCATC 59.749 43.478 0.00 0.00 0.00 2.92
1538 1893 3.685139 TTTGCCGTTCTCTTCATCTCT 57.315 42.857 0.00 0.00 0.00 3.10
1539 1894 2.662006 TGCCGTTCTCTTCATCTCTG 57.338 50.000 0.00 0.00 0.00 3.35
1542 1897 2.538437 CCGTTCTCTTCATCTCTGCAG 58.462 52.381 7.63 7.63 0.00 4.41
1543 1898 1.925847 CGTTCTCTTCATCTCTGCAGC 59.074 52.381 9.47 0.00 0.00 5.25
1544 1899 2.673326 CGTTCTCTTCATCTCTGCAGCA 60.673 50.000 9.47 0.00 0.00 4.41
1545 1900 3.533547 GTTCTCTTCATCTCTGCAGCAT 58.466 45.455 9.47 0.00 0.00 3.79
1546 1901 4.691175 GTTCTCTTCATCTCTGCAGCATA 58.309 43.478 9.47 0.00 0.00 3.14
1547 1902 5.299148 GTTCTCTTCATCTCTGCAGCATAT 58.701 41.667 9.47 0.00 0.00 1.78
1548 1903 4.884247 TCTCTTCATCTCTGCAGCATATG 58.116 43.478 9.47 12.08 0.00 1.78
1550 1905 5.246429 TCTCTTCATCTCTGCAGCATATGAT 59.754 40.000 19.54 0.00 0.00 2.45
1562 1917 2.386829 CATATGATGCCACCCCCTTT 57.613 50.000 0.00 0.00 0.00 3.11
1565 1920 0.618393 ATGATGCCACCCCCTTTTGG 60.618 55.000 0.00 0.00 39.97 3.28
1653 2011 1.541670 GCATATTTTGCCCCAGCCATG 60.542 52.381 0.00 0.00 46.15 3.66
1674 2032 4.530857 GCGGGTCATCCACCTCCG 62.531 72.222 0.00 0.00 45.95 4.63
1677 2035 3.083997 GGTCATCCACCTCCGCCT 61.084 66.667 0.00 0.00 42.84 5.52
1680 2038 0.179081 GTCATCCACCTCCGCCTTAC 60.179 60.000 0.00 0.00 0.00 2.34
1703 2061 1.633945 GTGGGGTCCTCAGGTATTTGT 59.366 52.381 0.00 0.00 0.00 2.83
1704 2062 2.041216 GTGGGGTCCTCAGGTATTTGTT 59.959 50.000 0.00 0.00 0.00 2.83
1705 2063 2.719705 TGGGGTCCTCAGGTATTTGTTT 59.280 45.455 0.00 0.00 0.00 2.83
1894 2252 0.828762 TGCCCTGTGCTTCTTTGCAT 60.829 50.000 0.00 0.00 45.23 3.96
1930 2288 5.409643 AACTCAATGTTTGAAGACGACTG 57.590 39.130 0.00 0.00 39.58 3.51
1932 2290 3.202097 TCAATGTTTGAAGACGACTGCA 58.798 40.909 0.00 0.00 36.59 4.41
1933 2291 3.625313 TCAATGTTTGAAGACGACTGCAA 59.375 39.130 4.04 4.04 39.64 4.08
1934 2292 3.609103 ATGTTTGAAGACGACTGCAAC 57.391 42.857 7.87 4.85 40.93 4.17
1935 2293 2.351455 TGTTTGAAGACGACTGCAACA 58.649 42.857 7.87 7.18 40.93 3.33
1936 2294 2.744741 TGTTTGAAGACGACTGCAACAA 59.255 40.909 7.87 0.00 40.93 2.83
1937 2295 3.376859 TGTTTGAAGACGACTGCAACAAT 59.623 39.130 7.87 0.00 40.93 2.71
1938 2296 3.878086 TTGAAGACGACTGCAACAATC 57.122 42.857 4.04 0.00 36.81 2.67
1939 2297 2.832563 TGAAGACGACTGCAACAATCA 58.167 42.857 0.00 0.00 0.00 2.57
1940 2298 3.402110 TGAAGACGACTGCAACAATCAT 58.598 40.909 0.00 0.00 0.00 2.45
1941 2299 3.814842 TGAAGACGACTGCAACAATCATT 59.185 39.130 0.00 0.00 0.00 2.57
1942 2300 4.994217 TGAAGACGACTGCAACAATCATTA 59.006 37.500 0.00 0.00 0.00 1.90
1943 2301 5.643348 TGAAGACGACTGCAACAATCATTAT 59.357 36.000 0.00 0.00 0.00 1.28
1944 2302 6.149308 TGAAGACGACTGCAACAATCATTATT 59.851 34.615 0.00 0.00 0.00 1.40
1945 2303 6.500684 AGACGACTGCAACAATCATTATTT 57.499 33.333 0.00 0.00 0.00 1.40
1946 2304 7.609760 AGACGACTGCAACAATCATTATTTA 57.390 32.000 0.00 0.00 0.00 1.40
1947 2305 7.464358 AGACGACTGCAACAATCATTATTTAC 58.536 34.615 0.00 0.00 0.00 2.01
1948 2306 7.334421 AGACGACTGCAACAATCATTATTTACT 59.666 33.333 0.00 0.00 0.00 2.24
1949 2307 7.816640 ACGACTGCAACAATCATTATTTACTT 58.183 30.769 0.00 0.00 0.00 2.24
1950 2308 8.296713 ACGACTGCAACAATCATTATTTACTTT 58.703 29.630 0.00 0.00 0.00 2.66
1951 2309 8.577939 CGACTGCAACAATCATTATTTACTTTG 58.422 33.333 0.00 0.00 0.00 2.77
1952 2310 8.243289 ACTGCAACAATCATTATTTACTTTGC 57.757 30.769 0.00 0.00 0.00 3.68
1953 2311 7.062138 ACTGCAACAATCATTATTTACTTTGCG 59.938 33.333 0.00 0.00 0.00 4.85
1954 2312 7.087007 TGCAACAATCATTATTTACTTTGCGA 58.913 30.769 0.00 0.00 0.00 5.10
1955 2313 7.273164 TGCAACAATCATTATTTACTTTGCGAG 59.727 33.333 0.00 0.00 0.00 5.03
1956 2314 7.253750 GCAACAATCATTATTTACTTTGCGAGG 60.254 37.037 0.00 0.00 0.00 4.63
1957 2315 7.624360 ACAATCATTATTTACTTTGCGAGGA 57.376 32.000 0.00 0.00 0.00 3.71
1958 2316 7.472543 ACAATCATTATTTACTTTGCGAGGAC 58.527 34.615 0.00 0.00 0.00 3.85
1959 2317 5.712217 TCATTATTTACTTTGCGAGGACG 57.288 39.130 0.00 0.00 42.93 4.79
1960 2318 5.172934 TCATTATTTACTTTGCGAGGACGT 58.827 37.500 0.00 0.00 41.98 4.34
1961 2319 6.331845 TCATTATTTACTTTGCGAGGACGTA 58.668 36.000 0.00 0.00 41.98 3.57
1962 2320 6.812656 TCATTATTTACTTTGCGAGGACGTAA 59.187 34.615 0.00 0.00 41.69 3.18
1963 2321 6.636666 TTATTTACTTTGCGAGGACGTAAG 57.363 37.500 0.00 0.00 43.75 2.34
1976 2334 2.153913 CGTAAGTGTGCCAGACTGC 58.846 57.895 0.00 0.00 0.00 4.40
1977 2335 0.319900 CGTAAGTGTGCCAGACTGCT 60.320 55.000 0.00 0.00 0.00 4.24
1978 2336 1.067846 CGTAAGTGTGCCAGACTGCTA 60.068 52.381 0.00 0.00 0.00 3.49
1979 2337 2.609491 CGTAAGTGTGCCAGACTGCTAA 60.609 50.000 0.00 0.00 0.00 3.09
1980 2338 2.638480 AAGTGTGCCAGACTGCTAAA 57.362 45.000 0.00 0.00 0.00 1.85
1981 2339 2.867109 AGTGTGCCAGACTGCTAAAT 57.133 45.000 0.00 0.00 0.00 1.40
1982 2340 3.146104 AGTGTGCCAGACTGCTAAATT 57.854 42.857 0.00 0.00 0.00 1.82
1983 2341 2.816087 AGTGTGCCAGACTGCTAAATTG 59.184 45.455 0.00 0.00 0.00 2.32
1984 2342 2.554032 GTGTGCCAGACTGCTAAATTGT 59.446 45.455 0.00 0.00 0.00 2.71
1985 2343 3.004734 GTGTGCCAGACTGCTAAATTGTT 59.995 43.478 0.00 0.00 0.00 2.83
1986 2344 3.636300 TGTGCCAGACTGCTAAATTGTTT 59.364 39.130 0.00 0.00 0.00 2.83
1987 2345 4.099266 TGTGCCAGACTGCTAAATTGTTTT 59.901 37.500 0.00 0.00 0.00 2.43
1988 2346 5.300539 TGTGCCAGACTGCTAAATTGTTTTA 59.699 36.000 0.00 0.00 0.00 1.52
1989 2347 6.015519 TGTGCCAGACTGCTAAATTGTTTTAT 60.016 34.615 0.00 0.00 0.00 1.40
1990 2348 6.868339 GTGCCAGACTGCTAAATTGTTTTATT 59.132 34.615 0.00 0.00 0.00 1.40
1991 2349 8.026607 GTGCCAGACTGCTAAATTGTTTTATTA 58.973 33.333 0.00 0.00 0.00 0.98
1992 2350 8.748412 TGCCAGACTGCTAAATTGTTTTATTAT 58.252 29.630 0.00 0.00 0.00 1.28
1993 2351 9.586435 GCCAGACTGCTAAATTGTTTTATTATT 57.414 29.630 0.00 0.00 0.00 1.40
2019 2377 9.901651 TCCTACAATATAAACTAGGGGATAACA 57.098 33.333 0.00 0.00 0.00 2.41
2020 2378 9.939802 CCTACAATATAAACTAGGGGATAACAC 57.060 37.037 0.00 0.00 0.00 3.32
2023 2381 8.999895 ACAATATAAACTAGGGGATAACACTGT 58.000 33.333 0.00 0.00 0.00 3.55
2024 2382 9.490379 CAATATAAACTAGGGGATAACACTGTC 57.510 37.037 0.00 0.00 0.00 3.51
2025 2383 4.838904 AAACTAGGGGATAACACTGTCC 57.161 45.455 0.00 0.00 32.08 4.02
2036 2394 7.981102 GGATAACACTGTCCCTATAAATTCC 57.019 40.000 0.00 0.00 0.00 3.01
2037 2395 7.746703 GGATAACACTGTCCCTATAAATTCCT 58.253 38.462 0.00 0.00 0.00 3.36
2038 2396 8.218488 GGATAACACTGTCCCTATAAATTCCTT 58.782 37.037 0.00 0.00 0.00 3.36
2039 2397 9.628500 GATAACACTGTCCCTATAAATTCCTTT 57.372 33.333 0.00 0.00 0.00 3.11
2040 2398 9.990868 ATAACACTGTCCCTATAAATTCCTTTT 57.009 29.630 0.00 0.00 0.00 2.27
2041 2399 8.721133 AACACTGTCCCTATAAATTCCTTTTT 57.279 30.769 0.00 0.00 0.00 1.94
2117 2475 4.878878 CCCCCATTAAGTCCGAGC 57.121 61.111 0.00 0.00 0.00 5.03
2118 2476 1.148498 CCCCCATTAAGTCCGAGCC 59.852 63.158 0.00 0.00 0.00 4.70
2119 2477 1.632018 CCCCCATTAAGTCCGAGCCA 61.632 60.000 0.00 0.00 0.00 4.75
2120 2478 0.474184 CCCCATTAAGTCCGAGCCAT 59.526 55.000 0.00 0.00 0.00 4.40
2121 2479 1.697432 CCCCATTAAGTCCGAGCCATA 59.303 52.381 0.00 0.00 0.00 2.74
2122 2480 2.289694 CCCCATTAAGTCCGAGCCATAG 60.290 54.545 0.00 0.00 0.00 2.23
2123 2481 2.632996 CCCATTAAGTCCGAGCCATAGA 59.367 50.000 0.00 0.00 0.00 1.98
2124 2482 3.306364 CCCATTAAGTCCGAGCCATAGAG 60.306 52.174 0.00 0.00 0.00 2.43
2125 2483 3.322254 CCATTAAGTCCGAGCCATAGAGT 59.678 47.826 0.00 0.00 0.00 3.24
2126 2484 4.523173 CCATTAAGTCCGAGCCATAGAGTA 59.477 45.833 0.00 0.00 0.00 2.59
2127 2485 5.010719 CCATTAAGTCCGAGCCATAGAGTAA 59.989 44.000 0.00 0.00 0.00 2.24
2128 2486 5.769484 TTAAGTCCGAGCCATAGAGTAAG 57.231 43.478 0.00 0.00 0.00 2.34
2129 2487 3.579534 AGTCCGAGCCATAGAGTAAGA 57.420 47.619 0.00 0.00 0.00 2.10
2130 2488 3.482436 AGTCCGAGCCATAGAGTAAGAG 58.518 50.000 0.00 0.00 0.00 2.85
2131 2489 3.117813 AGTCCGAGCCATAGAGTAAGAGT 60.118 47.826 0.00 0.00 0.00 3.24
2132 2490 3.003897 GTCCGAGCCATAGAGTAAGAGTG 59.996 52.174 0.00 0.00 0.00 3.51
2133 2491 3.118000 TCCGAGCCATAGAGTAAGAGTGA 60.118 47.826 0.00 0.00 0.00 3.41
2134 2492 3.252215 CCGAGCCATAGAGTAAGAGTGAG 59.748 52.174 0.00 0.00 0.00 3.51
2135 2493 4.130857 CGAGCCATAGAGTAAGAGTGAGA 58.869 47.826 0.00 0.00 0.00 3.27
2136 2494 4.759693 CGAGCCATAGAGTAAGAGTGAGAT 59.240 45.833 0.00 0.00 0.00 2.75
2137 2495 5.334802 CGAGCCATAGAGTAAGAGTGAGATG 60.335 48.000 0.00 0.00 0.00 2.90
2138 2496 5.700183 AGCCATAGAGTAAGAGTGAGATGA 58.300 41.667 0.00 0.00 0.00 2.92
2139 2497 5.769662 AGCCATAGAGTAAGAGTGAGATGAG 59.230 44.000 0.00 0.00 0.00 2.90
2140 2498 5.534654 GCCATAGAGTAAGAGTGAGATGAGT 59.465 44.000 0.00 0.00 0.00 3.41
2141 2499 6.040391 GCCATAGAGTAAGAGTGAGATGAGTT 59.960 42.308 0.00 0.00 0.00 3.01
2142 2500 7.417342 GCCATAGAGTAAGAGTGAGATGAGTTT 60.417 40.741 0.00 0.00 0.00 2.66
2143 2501 8.474025 CCATAGAGTAAGAGTGAGATGAGTTTT 58.526 37.037 0.00 0.00 0.00 2.43
2144 2502 9.515020 CATAGAGTAAGAGTGAGATGAGTTTTC 57.485 37.037 0.00 0.00 0.00 2.29
2145 2503 6.930731 AGAGTAAGAGTGAGATGAGTTTTCC 58.069 40.000 0.00 0.00 0.00 3.13
2146 2504 6.495181 AGAGTAAGAGTGAGATGAGTTTTCCA 59.505 38.462 0.00 0.00 0.00 3.53
2147 2505 7.015682 AGAGTAAGAGTGAGATGAGTTTTCCAA 59.984 37.037 0.00 0.00 0.00 3.53
2148 2506 7.509546 AGTAAGAGTGAGATGAGTTTTCCAAA 58.490 34.615 0.00 0.00 0.00 3.28
2149 2507 8.160106 AGTAAGAGTGAGATGAGTTTTCCAAAT 58.840 33.333 0.00 0.00 0.00 2.32
2150 2508 7.830099 AAGAGTGAGATGAGTTTTCCAAATT 57.170 32.000 0.00 0.00 0.00 1.82
2151 2509 7.446001 AGAGTGAGATGAGTTTTCCAAATTC 57.554 36.000 0.00 0.00 0.00 2.17
2152 2510 7.000472 AGAGTGAGATGAGTTTTCCAAATTCA 59.000 34.615 0.00 0.00 0.00 2.57
2153 2511 7.668886 AGAGTGAGATGAGTTTTCCAAATTCAT 59.331 33.333 6.87 6.87 0.00 2.57
2154 2512 7.824672 AGTGAGATGAGTTTTCCAAATTCATC 58.175 34.615 19.47 19.47 42.67 2.92
2155 2513 7.449395 AGTGAGATGAGTTTTCCAAATTCATCA 59.551 33.333 24.83 12.49 44.02 3.07
2156 2514 8.248945 GTGAGATGAGTTTTCCAAATTCATCAT 58.751 33.333 24.83 15.59 44.02 2.45
2157 2515 9.465199 TGAGATGAGTTTTCCAAATTCATCATA 57.535 29.630 24.83 15.78 44.02 2.15
2158 2516 9.947669 GAGATGAGTTTTCCAAATTCATCATAG 57.052 33.333 24.83 0.00 44.02 2.23
2159 2517 9.690913 AGATGAGTTTTCCAAATTCATCATAGA 57.309 29.630 24.83 0.00 44.02 1.98
2160 2518 9.727627 GATGAGTTTTCCAAATTCATCATAGAC 57.272 33.333 21.04 3.10 42.19 2.59
2161 2519 8.868522 TGAGTTTTCCAAATTCATCATAGACT 57.131 30.769 0.00 0.00 0.00 3.24
2162 2520 8.950210 TGAGTTTTCCAAATTCATCATAGACTC 58.050 33.333 0.00 0.00 0.00 3.36
2163 2521 9.171877 GAGTTTTCCAAATTCATCATAGACTCT 57.828 33.333 0.00 0.00 0.00 3.24
2164 2522 9.171877 AGTTTTCCAAATTCATCATAGACTCTC 57.828 33.333 0.00 0.00 0.00 3.20
2165 2523 8.401709 GTTTTCCAAATTCATCATAGACTCTCC 58.598 37.037 0.00 0.00 0.00 3.71
2166 2524 6.179906 TCCAAATTCATCATAGACTCTCCC 57.820 41.667 0.00 0.00 0.00 4.30
2167 2525 5.907662 TCCAAATTCATCATAGACTCTCCCT 59.092 40.000 0.00 0.00 0.00 4.20
2168 2526 7.075797 TCCAAATTCATCATAGACTCTCCCTA 58.924 38.462 0.00 0.00 0.00 3.53
2169 2527 7.736691 TCCAAATTCATCATAGACTCTCCCTAT 59.263 37.037 0.00 0.00 0.00 2.57
2170 2528 7.823310 CCAAATTCATCATAGACTCTCCCTATG 59.177 40.741 0.00 0.00 42.84 2.23
2171 2529 7.493499 AATTCATCATAGACTCTCCCTATGG 57.507 40.000 0.00 0.00 42.15 2.74
2172 2530 4.348486 TCATCATAGACTCTCCCTATGGC 58.652 47.826 0.00 0.00 42.15 4.40
2173 2531 4.045207 TCATCATAGACTCTCCCTATGGCT 59.955 45.833 0.00 0.00 42.15 4.75
2174 2532 4.477536 TCATAGACTCTCCCTATGGCTT 57.522 45.455 0.00 0.00 42.15 4.35
2175 2533 4.155709 TCATAGACTCTCCCTATGGCTTG 58.844 47.826 0.00 0.00 42.15 4.01
2176 2534 2.856760 AGACTCTCCCTATGGCTTGA 57.143 50.000 0.00 0.00 0.00 3.02
2177 2535 3.342926 AGACTCTCCCTATGGCTTGAT 57.657 47.619 0.00 0.00 0.00 2.57
2178 2536 4.477536 AGACTCTCCCTATGGCTTGATA 57.522 45.455 0.00 0.00 0.00 2.15
2179 2537 4.415596 AGACTCTCCCTATGGCTTGATAG 58.584 47.826 0.00 0.00 0.00 2.08
2180 2538 3.513515 GACTCTCCCTATGGCTTGATAGG 59.486 52.174 9.01 9.01 43.38 2.57
2181 2539 3.142977 ACTCTCCCTATGGCTTGATAGGA 59.857 47.826 14.86 1.47 45.70 2.94
2182 2540 3.768757 CTCTCCCTATGGCTTGATAGGAG 59.231 52.174 14.86 9.62 45.70 3.69
2183 2541 3.142977 TCTCCCTATGGCTTGATAGGAGT 59.857 47.826 14.86 0.00 45.70 3.85
2184 2542 4.357097 TCTCCCTATGGCTTGATAGGAGTA 59.643 45.833 14.86 3.96 45.70 2.59
2185 2543 5.087323 CTCCCTATGGCTTGATAGGAGTAA 58.913 45.833 14.86 2.28 45.70 2.24
2186 2544 5.087323 TCCCTATGGCTTGATAGGAGTAAG 58.913 45.833 14.86 0.00 45.70 2.34
2187 2545 5.087323 CCCTATGGCTTGATAGGAGTAAGA 58.913 45.833 14.86 0.00 45.70 2.10
2188 2546 5.544176 CCCTATGGCTTGATAGGAGTAAGAA 59.456 44.000 14.86 0.00 45.70 2.52
2189 2547 6.295575 CCCTATGGCTTGATAGGAGTAAGAAG 60.296 46.154 14.86 0.00 45.70 2.85
2190 2548 4.408182 TGGCTTGATAGGAGTAAGAAGC 57.592 45.455 0.00 0.00 36.02 3.86
2191 2549 3.774766 TGGCTTGATAGGAGTAAGAAGCA 59.225 43.478 0.00 0.00 38.02 3.91
2192 2550 4.225042 TGGCTTGATAGGAGTAAGAAGCAA 59.775 41.667 0.00 0.00 38.02 3.91
2193 2551 5.186198 GGCTTGATAGGAGTAAGAAGCAAA 58.814 41.667 0.00 0.00 38.02 3.68
2194 2552 5.295540 GGCTTGATAGGAGTAAGAAGCAAAG 59.704 44.000 0.00 0.00 38.02 2.77
2195 2553 6.109359 GCTTGATAGGAGTAAGAAGCAAAGA 58.891 40.000 0.00 0.00 36.62 2.52
2196 2554 6.257630 GCTTGATAGGAGTAAGAAGCAAAGAG 59.742 42.308 0.00 0.00 36.62 2.85
2197 2555 6.859112 TGATAGGAGTAAGAAGCAAAGAGT 57.141 37.500 0.00 0.00 0.00 3.24
2198 2556 7.246171 TGATAGGAGTAAGAAGCAAAGAGTT 57.754 36.000 0.00 0.00 0.00 3.01
2199 2557 7.099764 TGATAGGAGTAAGAAGCAAAGAGTTG 58.900 38.462 0.00 0.00 37.83 3.16
2200 2558 5.297569 AGGAGTAAGAAGCAAAGAGTTGT 57.702 39.130 0.00 0.00 37.06 3.32
2201 2559 6.420913 AGGAGTAAGAAGCAAAGAGTTGTA 57.579 37.500 0.00 0.00 37.06 2.41
2202 2560 6.827727 AGGAGTAAGAAGCAAAGAGTTGTAA 58.172 36.000 0.00 0.00 37.06 2.41
2203 2561 6.706716 AGGAGTAAGAAGCAAAGAGTTGTAAC 59.293 38.462 0.00 0.00 37.06 2.50
2204 2562 6.706716 GGAGTAAGAAGCAAAGAGTTGTAACT 59.293 38.462 0.00 0.00 43.16 2.24
2205 2563 7.226918 GGAGTAAGAAGCAAAGAGTTGTAACTT 59.773 37.037 0.00 0.00 39.88 2.66
2206 2564 7.920738 AGTAAGAAGCAAAGAGTTGTAACTTG 58.079 34.615 0.00 0.00 39.88 3.16
2207 2565 5.757850 AGAAGCAAAGAGTTGTAACTTGG 57.242 39.130 0.00 0.00 39.88 3.61
2208 2566 3.990318 AGCAAAGAGTTGTAACTTGGC 57.010 42.857 0.00 0.00 41.67 4.52
2209 2567 3.287222 AGCAAAGAGTTGTAACTTGGCA 58.713 40.909 0.00 0.00 43.19 4.92
2210 2568 3.699038 AGCAAAGAGTTGTAACTTGGCAA 59.301 39.130 0.00 0.00 43.19 4.52
2211 2569 4.159506 AGCAAAGAGTTGTAACTTGGCAAA 59.840 37.500 0.00 0.00 43.19 3.68
2212 2570 4.867608 GCAAAGAGTTGTAACTTGGCAAAA 59.132 37.500 0.00 0.00 41.20 2.44
2213 2571 5.350091 GCAAAGAGTTGTAACTTGGCAAAAA 59.650 36.000 0.00 0.00 41.20 1.94
2334 2696 9.817809 GTAGAGTTCCATTATGTTGACTATGAA 57.182 33.333 0.00 0.00 0.00 2.57
2336 2698 8.543774 AGAGTTCCATTATGTTGACTATGAACT 58.456 33.333 8.26 8.26 0.00 3.01
2453 2817 6.700352 ACAATCAAATGTTAAAGGGGTCATG 58.300 36.000 0.00 0.00 0.00 3.07
2466 2830 2.936498 GGGGTCATGTTGATGTTACTCG 59.064 50.000 0.00 0.00 0.00 4.18
2508 2872 2.226330 GTGTGCTGTAATTCACCACCA 58.774 47.619 0.00 0.00 33.18 4.17
2527 2891 3.201290 CCAGCTGCATAGAAGATCGTTT 58.799 45.455 8.66 0.00 0.00 3.60
2548 2914 9.104965 TCGTTTTTAGGAAAGATATATGGTGTG 57.895 33.333 0.00 0.00 0.00 3.82
2554 2920 5.132648 AGGAAAGATATATGGTGTGGCTTGA 59.867 40.000 0.00 0.00 0.00 3.02
2582 2948 5.877012 TCAGAAGAAAAGATCCATAGTGTGC 59.123 40.000 0.00 0.00 0.00 4.57
2601 2975 8.879342 AGTGTGCATCTGTATTCTATAACTTC 57.121 34.615 0.00 0.00 0.00 3.01
2650 3024 7.514784 TTTGTAATGATCTATCATGCCCTTG 57.485 36.000 6.22 0.00 46.22 3.61
2652 3026 3.733883 ATGATCTATCATGCCCTTGGG 57.266 47.619 4.66 0.32 45.27 4.12
2708 3085 5.824624 CCAGCATCTGAACCTATTATGTTGT 59.175 40.000 0.00 0.00 32.44 3.32
2952 3329 5.009410 ACATGCTTTTCTTCTGTTTCTGGAG 59.991 40.000 0.00 0.00 0.00 3.86
2964 3341 4.906618 TGTTTCTGGAGTCAAGTATTCCC 58.093 43.478 0.00 0.00 32.98 3.97
2990 3367 4.167268 CTCTTCTGGTAAACTGACGCTAC 58.833 47.826 0.00 0.00 0.00 3.58
2991 3368 3.825014 TCTTCTGGTAAACTGACGCTACT 59.175 43.478 0.00 0.00 0.00 2.57
3074 3451 4.016444 TCTGAAGGTACCAATTTGGATGC 58.984 43.478 22.19 10.50 40.96 3.91
3377 3754 1.139989 TGCTTCTTTGAGTCGCTTCG 58.860 50.000 0.00 0.00 0.00 3.79
3454 3832 5.382664 ACCTTAAACCTTTTCTCCAGACA 57.617 39.130 0.00 0.00 0.00 3.41
3467 3845 0.532862 CCAGACACAGAAGCAACCGT 60.533 55.000 0.00 0.00 0.00 4.83
3516 3894 9.396938 GTAGCTTCTAGTCCTATAATTCGAAAC 57.603 37.037 0.00 0.00 0.00 2.78
3588 3966 5.794945 CAGTGTTACCAATGTTGCTAATTCG 59.205 40.000 0.00 0.00 32.16 3.34
3727 4105 9.875691 CCGATAGAAAATATGGATTATGACTGA 57.124 33.333 0.00 0.00 39.76 3.41
3950 4340 3.884895 CAGGTATATTGTGTTGGCCTCA 58.115 45.455 3.32 0.00 0.00 3.86
4037 4428 3.350219 TCCAATCCTCGAAAAGGGAAG 57.650 47.619 0.00 0.00 46.23 3.46
4060 4451 3.375299 GCAGTATCTGGAAACATGGACAC 59.625 47.826 0.00 0.00 41.51 3.67
4137 4528 4.402192 CAGTGATACTGGGACGCG 57.598 61.111 3.53 3.53 42.35 6.01
4464 4859 2.297033 GCAGAAATGCCTCTGGACAAAA 59.703 45.455 8.99 0.00 42.68 2.44
4523 4921 5.063944 CGTGGAGAATTTCTTGTCGATGATT 59.936 40.000 0.00 0.00 0.00 2.57
4713 5119 3.811497 GCTCATGCTGCTCACATAACATA 59.189 43.478 0.00 0.00 36.03 2.29
4714 5120 4.454847 GCTCATGCTGCTCACATAACATAT 59.545 41.667 0.00 0.00 36.03 1.78
4850 5257 2.631062 AGTCTCGGTGTGTCCATGTTTA 59.369 45.455 0.00 0.00 35.57 2.01
4994 5401 6.149308 CAGTATATGCAAGAGGTTGTGTGAAA 59.851 38.462 0.00 0.00 35.92 2.69
5150 5557 4.610605 TCAGTTTCCTTAACCGATGACA 57.389 40.909 0.00 0.00 37.46 3.58
5175 5582 6.040166 ACCGTAAAGTCGTCTATGATATTGGT 59.960 38.462 0.00 0.00 0.00 3.67
5176 5583 6.921857 CCGTAAAGTCGTCTATGATATTGGTT 59.078 38.462 0.00 0.00 0.00 3.67
5177 5584 7.437267 CCGTAAAGTCGTCTATGATATTGGTTT 59.563 37.037 0.00 0.00 0.00 3.27
5178 5585 8.266682 CGTAAAGTCGTCTATGATATTGGTTTG 58.733 37.037 0.00 0.00 0.00 2.93
5179 5586 9.309516 GTAAAGTCGTCTATGATATTGGTTTGA 57.690 33.333 0.00 0.00 0.00 2.69
5180 5587 8.425577 AAAGTCGTCTATGATATTGGTTTGAG 57.574 34.615 0.00 0.00 0.00 3.02
5181 5588 7.113658 AGTCGTCTATGATATTGGTTTGAGT 57.886 36.000 0.00 0.00 0.00 3.41
5182 5589 8.234136 AGTCGTCTATGATATTGGTTTGAGTA 57.766 34.615 0.00 0.00 0.00 2.59
5183 5590 8.692710 AGTCGTCTATGATATTGGTTTGAGTAA 58.307 33.333 0.00 0.00 0.00 2.24
5184 5591 9.309516 GTCGTCTATGATATTGGTTTGAGTAAA 57.690 33.333 0.00 0.00 0.00 2.01
5199 5606 9.999009 GGTTTGAGTAAATAGCATAAAACTACC 57.001 33.333 0.00 0.00 0.00 3.18
5202 5609 9.953565 TTGAGTAAATAGCATAAAACTACCACT 57.046 29.630 0.00 0.00 0.00 4.00
5203 5610 9.953565 TGAGTAAATAGCATAAAACTACCACTT 57.046 29.630 0.00 0.00 0.00 3.16
5208 5615 7.916914 ATAGCATAAAACTACCACTTTTCGT 57.083 32.000 0.00 0.00 0.00 3.85
5209 5616 5.997385 AGCATAAAACTACCACTTTTCGTG 58.003 37.500 0.00 0.00 43.41 4.35
5210 5617 4.615541 GCATAAAACTACCACTTTTCGTGC 59.384 41.667 0.00 0.00 42.42 5.34
5211 5618 5.562113 GCATAAAACTACCACTTTTCGTGCT 60.562 40.000 0.00 0.00 42.42 4.40
5212 5619 6.347888 GCATAAAACTACCACTTTTCGTGCTA 60.348 38.462 0.00 0.00 42.42 3.49
5213 5620 5.668558 AAAACTACCACTTTTCGTGCTAG 57.331 39.130 0.00 0.00 42.42 3.42
5214 5621 3.314541 ACTACCACTTTTCGTGCTAGG 57.685 47.619 0.00 0.00 42.42 3.02
5215 5622 2.028385 ACTACCACTTTTCGTGCTAGGG 60.028 50.000 0.00 0.00 42.42 3.53
5216 5623 0.763035 ACCACTTTTCGTGCTAGGGT 59.237 50.000 0.00 0.00 42.42 4.34
5217 5624 1.142262 ACCACTTTTCGTGCTAGGGTT 59.858 47.619 0.00 0.00 42.42 4.11
5218 5625 1.804748 CCACTTTTCGTGCTAGGGTTC 59.195 52.381 0.00 0.00 42.42 3.62
5219 5626 2.550208 CCACTTTTCGTGCTAGGGTTCT 60.550 50.000 0.00 0.00 42.42 3.01
5220 5627 3.306502 CCACTTTTCGTGCTAGGGTTCTA 60.307 47.826 0.00 0.00 42.42 2.10
5221 5628 4.312443 CACTTTTCGTGCTAGGGTTCTAA 58.688 43.478 0.00 0.00 36.72 2.10
5222 5629 4.753107 CACTTTTCGTGCTAGGGTTCTAAA 59.247 41.667 0.00 0.00 36.72 1.85
5223 5630 5.237779 CACTTTTCGTGCTAGGGTTCTAAAA 59.762 40.000 0.00 0.00 36.72 1.52
5224 5631 5.824097 ACTTTTCGTGCTAGGGTTCTAAAAA 59.176 36.000 0.00 0.00 0.00 1.94
5260 5667 8.428186 TTTTGTTTATGACGGATACCTATCAC 57.572 34.615 0.00 0.00 34.40 3.06
5261 5668 6.971726 TGTTTATGACGGATACCTATCACT 57.028 37.500 0.00 0.00 34.40 3.41
5262 5669 7.356089 TGTTTATGACGGATACCTATCACTT 57.644 36.000 0.00 0.00 34.40 3.16
5263 5670 7.431249 TGTTTATGACGGATACCTATCACTTC 58.569 38.462 0.00 0.00 34.40 3.01
5264 5671 7.287005 TGTTTATGACGGATACCTATCACTTCT 59.713 37.037 0.00 0.00 34.40 2.85
5265 5672 5.968528 ATGACGGATACCTATCACTTCTC 57.031 43.478 0.00 0.00 34.40 2.87
5266 5673 4.788679 TGACGGATACCTATCACTTCTCA 58.211 43.478 0.00 0.00 34.40 3.27
5267 5674 5.198207 TGACGGATACCTATCACTTCTCAA 58.802 41.667 0.00 0.00 34.40 3.02
5268 5675 5.655090 TGACGGATACCTATCACTTCTCAAA 59.345 40.000 0.00 0.00 34.40 2.69
5269 5676 6.153851 TGACGGATACCTATCACTTCTCAAAA 59.846 38.462 0.00 0.00 34.40 2.44
5270 5677 6.942976 ACGGATACCTATCACTTCTCAAAAA 58.057 36.000 0.00 0.00 34.40 1.94
5285 5692 2.432119 AAAAACCCAAATCGCCCGT 58.568 47.368 0.00 0.00 0.00 5.28
5286 5693 0.753867 AAAAACCCAAATCGCCCGTT 59.246 45.000 0.00 0.00 0.00 4.44
5287 5694 0.032815 AAAACCCAAATCGCCCGTTG 59.967 50.000 0.00 0.00 0.00 4.10
5288 5695 2.428960 AAACCCAAATCGCCCGTTGC 62.429 55.000 0.00 0.00 0.00 4.17
5289 5696 3.061848 CCCAAATCGCCCGTTGCT 61.062 61.111 0.00 0.00 38.05 3.91
5290 5697 1.747367 CCCAAATCGCCCGTTGCTA 60.747 57.895 0.00 0.00 38.05 3.49
5291 5698 1.714899 CCCAAATCGCCCGTTGCTAG 61.715 60.000 0.00 0.00 38.05 3.42
5292 5699 1.062525 CAAATCGCCCGTTGCTAGC 59.937 57.895 8.10 8.10 38.05 3.42
5296 5703 3.419759 CGCCCGTTGCTAGCGTTT 61.420 61.111 10.77 0.00 44.65 3.60
5297 5704 2.951458 GCCCGTTGCTAGCGTTTT 59.049 55.556 10.77 0.00 36.87 2.43
5298 5705 1.442017 GCCCGTTGCTAGCGTTTTG 60.442 57.895 10.77 0.00 36.87 2.44
5299 5706 1.847890 GCCCGTTGCTAGCGTTTTGA 61.848 55.000 10.77 0.00 36.87 2.69
5300 5707 0.589223 CCCGTTGCTAGCGTTTTGAA 59.411 50.000 10.77 0.00 0.00 2.69
5301 5708 1.662026 CCCGTTGCTAGCGTTTTGAAC 60.662 52.381 10.77 6.76 0.00 3.18
5302 5709 1.662026 CCGTTGCTAGCGTTTTGAACC 60.662 52.381 10.77 0.00 0.00 3.62
5303 5710 1.670326 GTTGCTAGCGTTTTGAACCG 58.330 50.000 10.77 0.00 0.00 4.44
5304 5711 1.003223 GTTGCTAGCGTTTTGAACCGT 60.003 47.619 10.77 0.00 0.00 4.83
5305 5712 1.301423 TGCTAGCGTTTTGAACCGTT 58.699 45.000 10.77 0.00 0.00 4.44
5306 5713 1.671845 TGCTAGCGTTTTGAACCGTTT 59.328 42.857 10.77 0.00 0.00 3.60
5307 5714 2.097791 TGCTAGCGTTTTGAACCGTTTT 59.902 40.909 10.77 0.00 0.00 2.43
5308 5715 2.717519 GCTAGCGTTTTGAACCGTTTTC 59.282 45.455 0.00 0.00 0.00 2.29
5309 5716 3.547413 GCTAGCGTTTTGAACCGTTTTCT 60.547 43.478 0.00 0.00 0.00 2.52
5310 5717 2.792749 AGCGTTTTGAACCGTTTTCTG 58.207 42.857 0.00 0.00 0.00 3.02
5311 5718 2.420722 AGCGTTTTGAACCGTTTTCTGA 59.579 40.909 0.00 0.00 0.00 3.27
5312 5719 2.528688 GCGTTTTGAACCGTTTTCTGAC 59.471 45.455 0.00 0.00 0.00 3.51
5313 5720 2.774074 CGTTTTGAACCGTTTTCTGACG 59.226 45.455 0.00 0.00 42.43 4.35
5319 5726 3.545911 CGTTTTCTGACGGTCCGG 58.454 61.111 17.28 0.00 39.27 5.14
5320 5727 2.025418 CGTTTTCTGACGGTCCGGG 61.025 63.158 17.28 5.54 39.27 5.73
5321 5728 2.031465 TTTTCTGACGGTCCGGGC 59.969 61.111 17.28 0.00 0.00 6.13
5322 5729 3.540367 TTTTCTGACGGTCCGGGCC 62.540 63.158 17.58 17.58 0.00 5.80
5343 5750 1.227380 CCTATCAGGCCACGTCAGC 60.227 63.158 5.01 0.00 0.00 4.26
5344 5751 1.589993 CTATCAGGCCACGTCAGCG 60.590 63.158 5.01 0.00 44.93 5.18
5355 5762 3.753539 GTCAGCGTCGCACGTGAC 61.754 66.667 22.23 19.59 44.73 3.67
5382 5789 1.983160 CGTTAACGGCCGTTACTCG 59.017 57.895 42.22 38.81 39.90 4.18
5428 5835 3.858989 GCTCGCTCGCTGCCTTTC 61.859 66.667 0.00 0.00 38.78 2.62
5429 5836 2.125753 CTCGCTCGCTGCCTTTCT 60.126 61.111 0.00 0.00 38.78 2.52
5430 5837 2.125912 TCGCTCGCTGCCTTTCTC 60.126 61.111 0.00 0.00 38.78 2.87
5431 5838 2.125753 CGCTCGCTGCCTTTCTCT 60.126 61.111 0.00 0.00 38.78 3.10
5432 5839 2.164026 CGCTCGCTGCCTTTCTCTC 61.164 63.158 0.00 0.00 38.78 3.20
5433 5840 1.217779 GCTCGCTGCCTTTCTCTCT 59.782 57.895 0.00 0.00 35.15 3.10
5434 5841 0.805711 GCTCGCTGCCTTTCTCTCTC 60.806 60.000 0.00 0.00 35.15 3.20
5435 5842 0.817013 CTCGCTGCCTTTCTCTCTCT 59.183 55.000 0.00 0.00 0.00 3.10
5436 5843 0.529833 TCGCTGCCTTTCTCTCTCTG 59.470 55.000 0.00 0.00 0.00 3.35
5437 5844 0.246086 CGCTGCCTTTCTCTCTCTGT 59.754 55.000 0.00 0.00 0.00 3.41
5438 5845 1.735369 CGCTGCCTTTCTCTCTCTGTC 60.735 57.143 0.00 0.00 0.00 3.51
5439 5846 1.735369 GCTGCCTTTCTCTCTCTGTCG 60.735 57.143 0.00 0.00 0.00 4.35
5440 5847 0.891373 TGCCTTTCTCTCTCTGTCGG 59.109 55.000 0.00 0.00 0.00 4.79
5441 5848 0.459411 GCCTTTCTCTCTCTGTCGGC 60.459 60.000 0.00 0.00 0.00 5.54
5442 5849 0.891373 CCTTTCTCTCTCTGTCGGCA 59.109 55.000 0.00 0.00 0.00 5.69
5443 5850 1.135141 CCTTTCTCTCTCTGTCGGCAG 60.135 57.143 11.77 11.77 43.87 4.85
5444 5851 0.244994 TTTCTCTCTCTGTCGGCAGC 59.755 55.000 13.43 0.00 42.29 5.25
5445 5852 0.895559 TTCTCTCTCTGTCGGCAGCA 60.896 55.000 13.43 0.00 42.29 4.41
5446 5853 0.682532 TCTCTCTCTGTCGGCAGCAT 60.683 55.000 13.43 0.00 42.29 3.79
5447 5854 0.248990 CTCTCTCTGTCGGCAGCATC 60.249 60.000 13.43 0.00 42.29 3.91
5448 5855 0.682532 TCTCTCTGTCGGCAGCATCT 60.683 55.000 13.43 0.00 42.29 2.90
5449 5856 0.248990 CTCTCTGTCGGCAGCATCTC 60.249 60.000 13.43 0.00 42.29 2.75
5450 5857 0.682532 TCTCTGTCGGCAGCATCTCT 60.683 55.000 13.43 0.00 42.29 3.10
5451 5858 0.248990 CTCTGTCGGCAGCATCTCTC 60.249 60.000 13.43 0.00 42.29 3.20
5452 5859 0.682532 TCTGTCGGCAGCATCTCTCT 60.683 55.000 13.43 0.00 42.29 3.10
5453 5860 0.248990 CTGTCGGCAGCATCTCTCTC 60.249 60.000 3.01 0.00 35.77 3.20
5454 5861 0.682532 TGTCGGCAGCATCTCTCTCT 60.683 55.000 0.00 0.00 0.00 3.10
5455 5862 0.030638 GTCGGCAGCATCTCTCTCTC 59.969 60.000 0.00 0.00 0.00 3.20
5456 5863 0.106769 TCGGCAGCATCTCTCTCTCT 60.107 55.000 0.00 0.00 0.00 3.10
5457 5864 0.311790 CGGCAGCATCTCTCTCTCTC 59.688 60.000 0.00 0.00 0.00 3.20
5458 5865 0.311790 GGCAGCATCTCTCTCTCTCG 59.688 60.000 0.00 0.00 0.00 4.04
5459 5866 0.318107 GCAGCATCTCTCTCTCTCGC 60.318 60.000 0.00 0.00 0.00 5.03
5460 5867 1.311859 CAGCATCTCTCTCTCTCGCT 58.688 55.000 0.00 0.00 0.00 4.93
5461 5868 1.265095 CAGCATCTCTCTCTCTCGCTC 59.735 57.143 0.00 0.00 0.00 5.03
5462 5869 0.593128 GCATCTCTCTCTCTCGCTCC 59.407 60.000 0.00 0.00 0.00 4.70
5463 5870 1.815408 GCATCTCTCTCTCTCGCTCCT 60.815 57.143 0.00 0.00 0.00 3.69
5464 5871 2.146342 CATCTCTCTCTCTCGCTCCTC 58.854 57.143 0.00 0.00 0.00 3.71
5465 5872 0.468226 TCTCTCTCTCTCGCTCCTCC 59.532 60.000 0.00 0.00 0.00 4.30
5466 5873 0.469917 CTCTCTCTCTCGCTCCTCCT 59.530 60.000 0.00 0.00 0.00 3.69
5467 5874 0.916086 TCTCTCTCTCGCTCCTCCTT 59.084 55.000 0.00 0.00 0.00 3.36
5468 5875 1.283613 TCTCTCTCTCGCTCCTCCTTT 59.716 52.381 0.00 0.00 0.00 3.11
5469 5876 1.676006 CTCTCTCTCGCTCCTCCTTTC 59.324 57.143 0.00 0.00 0.00 2.62
5470 5877 0.744281 CTCTCTCGCTCCTCCTTTCC 59.256 60.000 0.00 0.00 0.00 3.13
5471 5878 0.684805 TCTCTCGCTCCTCCTTTCCC 60.685 60.000 0.00 0.00 0.00 3.97
5472 5879 1.681486 CTCTCGCTCCTCCTTTCCCC 61.681 65.000 0.00 0.00 0.00 4.81
5473 5880 2.687566 TCGCTCCTCCTTTCCCCC 60.688 66.667 0.00 0.00 0.00 5.40
5474 5881 4.162690 CGCTCCTCCTTTCCCCCG 62.163 72.222 0.00 0.00 0.00 5.73
5475 5882 3.009714 GCTCCTCCTTTCCCCCGT 61.010 66.667 0.00 0.00 0.00 5.28
5476 5883 2.990479 CTCCTCCTTTCCCCCGTG 59.010 66.667 0.00 0.00 0.00 4.94
5477 5884 3.327404 TCCTCCTTTCCCCCGTGC 61.327 66.667 0.00 0.00 0.00 5.34
5478 5885 3.330720 CCTCCTTTCCCCCGTGCT 61.331 66.667 0.00 0.00 0.00 4.40
5479 5886 2.269241 CTCCTTTCCCCCGTGCTC 59.731 66.667 0.00 0.00 0.00 4.26
5480 5887 2.203938 TCCTTTCCCCCGTGCTCT 60.204 61.111 0.00 0.00 0.00 4.09
5481 5888 2.245438 CTCCTTTCCCCCGTGCTCTC 62.245 65.000 0.00 0.00 0.00 3.20
5482 5889 2.294078 CCTTTCCCCCGTGCTCTCT 61.294 63.158 0.00 0.00 0.00 3.10
5483 5890 1.078848 CTTTCCCCCGTGCTCTCTG 60.079 63.158 0.00 0.00 0.00 3.35
5484 5891 1.831652 CTTTCCCCCGTGCTCTCTGT 61.832 60.000 0.00 0.00 0.00 3.41
5485 5892 1.827399 TTTCCCCCGTGCTCTCTGTC 61.827 60.000 0.00 0.00 0.00 3.51
5486 5893 2.681778 CCCCCGTGCTCTCTGTCT 60.682 66.667 0.00 0.00 0.00 3.41
5487 5894 2.716017 CCCCCGTGCTCTCTGTCTC 61.716 68.421 0.00 0.00 0.00 3.36
5488 5895 1.680651 CCCCGTGCTCTCTGTCTCT 60.681 63.158 0.00 0.00 0.00 3.10
5489 5896 1.662438 CCCCGTGCTCTCTGTCTCTC 61.662 65.000 0.00 0.00 0.00 3.20
5490 5897 1.662438 CCCGTGCTCTCTGTCTCTCC 61.662 65.000 0.00 0.00 0.00 3.71
5491 5898 1.662438 CCGTGCTCTCTGTCTCTCCC 61.662 65.000 0.00 0.00 0.00 4.30
5492 5899 1.806568 GTGCTCTCTGTCTCTCCCG 59.193 63.158 0.00 0.00 0.00 5.14
5493 5900 0.678366 GTGCTCTCTGTCTCTCCCGA 60.678 60.000 0.00 0.00 0.00 5.14
5494 5901 0.678366 TGCTCTCTGTCTCTCCCGAC 60.678 60.000 0.00 0.00 34.52 4.79
5495 5902 1.711060 GCTCTCTGTCTCTCCCGACG 61.711 65.000 0.00 0.00 36.71 5.12
5496 5903 0.108089 CTCTCTGTCTCTCCCGACGA 60.108 60.000 0.00 0.00 36.71 4.20
5497 5904 0.542333 TCTCTGTCTCTCCCGACGAT 59.458 55.000 0.00 0.00 36.71 3.73
5498 5905 0.660488 CTCTGTCTCTCCCGACGATG 59.340 60.000 0.00 0.00 36.71 3.84
5499 5906 0.748367 TCTGTCTCTCCCGACGATGG 60.748 60.000 0.00 0.00 36.71 3.51
5500 5907 2.343163 CTGTCTCTCCCGACGATGGC 62.343 65.000 0.00 0.00 36.71 4.40
5501 5908 3.209812 TCTCTCCCGACGATGGCG 61.210 66.667 0.00 0.00 44.79 5.69
5516 5923 3.854459 GCGGCGGCGAAGAAGAAG 61.854 66.667 36.87 2.46 0.00 2.85
5517 5924 3.188786 CGGCGGCGAAGAAGAAGG 61.189 66.667 29.19 0.00 0.00 3.46
5518 5925 2.264794 GGCGGCGAAGAAGAAGGA 59.735 61.111 12.98 0.00 0.00 3.36
5519 5926 2.101233 GGCGGCGAAGAAGAAGGAC 61.101 63.158 12.98 0.00 0.00 3.85
5520 5927 2.445438 GCGGCGAAGAAGAAGGACG 61.445 63.158 12.98 0.00 0.00 4.79
5521 5928 1.211969 CGGCGAAGAAGAAGGACGA 59.788 57.895 0.00 0.00 0.00 4.20
5522 5929 0.179134 CGGCGAAGAAGAAGGACGAT 60.179 55.000 0.00 0.00 0.00 3.73
5523 5930 1.281899 GGCGAAGAAGAAGGACGATG 58.718 55.000 0.00 0.00 0.00 3.84
5524 5931 1.281899 GCGAAGAAGAAGGACGATGG 58.718 55.000 0.00 0.00 0.00 3.51
5525 5932 1.281899 CGAAGAAGAAGGACGATGGC 58.718 55.000 0.00 0.00 0.00 4.40
5526 5933 1.281899 GAAGAAGAAGGACGATGGCG 58.718 55.000 0.00 0.00 44.79 5.69
5527 5934 0.895530 AAGAAGAAGGACGATGGCGA 59.104 50.000 0.00 0.00 41.64 5.54
5528 5935 0.457851 AGAAGAAGGACGATGGCGAG 59.542 55.000 0.00 0.00 41.64 5.03
5529 5936 1.148759 GAAGAAGGACGATGGCGAGC 61.149 60.000 0.00 0.00 41.64 5.03
5530 5937 2.579684 AAGAAGGACGATGGCGAGCC 62.580 60.000 7.26 7.26 41.64 4.70
5531 5938 3.077556 AAGGACGATGGCGAGCCT 61.078 61.111 15.75 0.69 43.66 4.58
5532 5939 3.376935 AAGGACGATGGCGAGCCTG 62.377 63.158 15.75 7.73 42.02 4.85
5533 5940 4.899239 GGACGATGGCGAGCCTGG 62.899 72.222 15.75 6.85 41.64 4.45
5534 5941 4.899239 GACGATGGCGAGCCTGGG 62.899 72.222 15.75 6.51 41.64 4.45
5566 5973 4.803426 CGAGGGCGGTGCTCACTC 62.803 72.222 0.00 0.00 0.00 3.51
5567 5974 4.459089 GAGGGCGGTGCTCACTCC 62.459 72.222 0.00 2.35 0.00 3.85
5573 5980 2.574399 GGTGCTCACTCCGAGGTC 59.426 66.667 0.00 0.00 42.55 3.85
5574 5981 2.276116 GGTGCTCACTCCGAGGTCA 61.276 63.158 0.00 0.00 42.55 4.02
5575 5982 1.666011 GTGCTCACTCCGAGGTCAA 59.334 57.895 0.00 0.00 42.55 3.18
5576 5983 0.667792 GTGCTCACTCCGAGGTCAAC 60.668 60.000 0.00 0.00 42.55 3.18
5577 5984 1.112916 TGCTCACTCCGAGGTCAACA 61.113 55.000 0.00 0.00 42.55 3.33
5578 5985 0.033504 GCTCACTCCGAGGTCAACAA 59.966 55.000 0.00 0.00 42.55 2.83
5579 5986 1.937108 GCTCACTCCGAGGTCAACAAG 60.937 57.143 0.00 0.00 42.55 3.16
5580 5987 1.341531 CTCACTCCGAGGTCAACAAGT 59.658 52.381 0.00 0.00 38.18 3.16
5581 5988 1.068588 TCACTCCGAGGTCAACAAGTG 59.931 52.381 0.00 0.00 36.36 3.16
5582 5989 0.393077 ACTCCGAGGTCAACAAGTGG 59.607 55.000 0.00 0.00 0.00 4.00
5583 5990 0.951040 CTCCGAGGTCAACAAGTGGC 60.951 60.000 0.00 0.00 0.00 5.01
5584 5991 1.071471 CCGAGGTCAACAAGTGGCT 59.929 57.895 0.00 0.00 30.18 4.75
5585 5992 0.320374 CCGAGGTCAACAAGTGGCTA 59.680 55.000 0.00 0.00 30.18 3.93
5586 5993 1.673033 CCGAGGTCAACAAGTGGCTAG 60.673 57.143 0.00 0.00 30.18 3.42
5587 5994 1.673033 CGAGGTCAACAAGTGGCTAGG 60.673 57.143 0.00 0.00 30.18 3.02
5588 5995 0.036875 AGGTCAACAAGTGGCTAGGC 59.963 55.000 9.85 9.85 30.18 3.93
5589 5996 0.250727 GGTCAACAAGTGGCTAGGCA 60.251 55.000 16.16 16.16 30.18 4.75
5590 5997 1.160137 GTCAACAAGTGGCTAGGCAG 58.840 55.000 20.88 10.89 0.00 4.85
5599 6006 3.267974 GCTAGGCAGCGCAAGTTT 58.732 55.556 11.47 0.00 38.22 2.66
5600 6007 1.135523 GCTAGGCAGCGCAAGTTTC 59.864 57.895 11.47 0.00 38.22 2.78
5601 6008 1.796796 CTAGGCAGCGCAAGTTTCC 59.203 57.895 11.47 0.45 41.68 3.13
5602 6009 1.648467 CTAGGCAGCGCAAGTTTCCC 61.648 60.000 11.47 0.00 41.68 3.97
5603 6010 4.404654 GGCAGCGCAAGTTTCCCG 62.405 66.667 11.47 0.00 41.68 5.14
5604 6011 3.353836 GCAGCGCAAGTTTCCCGA 61.354 61.111 11.47 0.00 41.68 5.14
5605 6012 2.556287 CAGCGCAAGTTTCCCGAC 59.444 61.111 11.47 0.00 41.68 4.79
5606 6013 2.668550 AGCGCAAGTTTCCCGACC 60.669 61.111 11.47 0.00 41.68 4.79
5607 6014 3.733960 GCGCAAGTTTCCCGACCC 61.734 66.667 0.30 0.00 41.68 4.46
5608 6015 2.281208 CGCAAGTTTCCCGACCCA 60.281 61.111 0.00 0.00 0.00 4.51
5609 6016 2.325082 CGCAAGTTTCCCGACCCAG 61.325 63.158 0.00 0.00 0.00 4.45
5610 6017 2.626780 GCAAGTTTCCCGACCCAGC 61.627 63.158 0.00 0.00 0.00 4.85
5611 6018 2.032071 AAGTTTCCCGACCCAGCG 59.968 61.111 0.00 0.00 0.00 5.18
5612 6019 4.699522 AGTTTCCCGACCCAGCGC 62.700 66.667 0.00 0.00 0.00 5.92
5613 6020 4.699522 GTTTCCCGACCCAGCGCT 62.700 66.667 2.64 2.64 0.00 5.92
5614 6021 3.948719 TTTCCCGACCCAGCGCTT 61.949 61.111 7.50 0.00 0.00 4.68
5615 6022 4.697756 TTCCCGACCCAGCGCTTG 62.698 66.667 7.50 3.55 0.00 4.01
5618 6025 4.379243 CCGACCCAGCGCTTGTCT 62.379 66.667 25.88 5.62 0.00 3.41
5619 6026 3.114616 CGACCCAGCGCTTGTCTG 61.115 66.667 25.88 18.36 0.00 3.51
5628 6035 4.329545 GCTTGTCTGGGCCACCGA 62.330 66.667 0.00 0.00 40.75 4.69
5629 6036 2.429930 CTTGTCTGGGCCACCGAA 59.570 61.111 0.00 0.00 40.75 4.30
5630 6037 1.672356 CTTGTCTGGGCCACCGAAG 60.672 63.158 0.00 0.20 40.75 3.79
5631 6038 3.842925 TTGTCTGGGCCACCGAAGC 62.843 63.158 0.00 0.00 40.75 3.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 2.701006 CAGGGCGCATTCGTAACG 59.299 61.111 10.83 0.00 38.14 3.18
38 39 3.834799 GACGGACGCTCGGGGAAT 61.835 66.667 3.19 0.00 0.00 3.01
193 194 1.210931 GCACTCCTACGTACGCACA 59.789 57.895 16.72 0.00 0.00 4.57
209 210 1.136305 CGGAAGGGAATTCGACTAGCA 59.864 52.381 0.00 0.00 38.95 3.49
210 211 1.854227 CGGAAGGGAATTCGACTAGC 58.146 55.000 0.00 0.00 38.95 3.42
358 359 4.106197 CGTAGACTAACAGCAGGTTGATC 58.894 47.826 4.24 0.00 40.73 2.92
478 533 1.480137 CCAAACACAGCAGGTTCCAAA 59.520 47.619 0.00 0.00 0.00 3.28
501 556 1.232621 GGTGCCGGGTGAAACAGTAC 61.233 60.000 2.18 0.00 39.98 2.73
502 557 1.071814 GGTGCCGGGTGAAACAGTA 59.928 57.895 2.18 0.00 39.98 2.74
503 558 2.203294 GGTGCCGGGTGAAACAGT 60.203 61.111 2.18 0.00 39.98 3.55
504 559 1.966451 GAGGTGCCGGGTGAAACAG 60.966 63.158 2.18 0.00 39.98 3.16
505 560 2.112297 GAGGTGCCGGGTGAAACA 59.888 61.111 2.18 0.00 39.98 2.83
506 561 1.966451 CAGAGGTGCCGGGTGAAAC 60.966 63.158 2.18 0.00 0.00 2.78
509 564 3.311110 GTCAGAGGTGCCGGGTGA 61.311 66.667 2.18 0.00 0.00 4.02
510 565 4.394712 GGTCAGAGGTGCCGGGTG 62.395 72.222 2.18 0.00 0.00 4.61
511 566 4.640690 AGGTCAGAGGTGCCGGGT 62.641 66.667 2.18 0.00 0.00 5.28
527 582 1.551452 AGAGTTTCCTCTGTCCGGAG 58.449 55.000 3.06 0.00 46.45 4.63
589 644 2.027192 CCATCACCGGAAGAAAGGAAGA 60.027 50.000 9.46 0.00 0.00 2.87
590 645 2.290323 ACCATCACCGGAAGAAAGGAAG 60.290 50.000 9.46 0.00 0.00 3.46
591 646 1.702957 ACCATCACCGGAAGAAAGGAA 59.297 47.619 9.46 0.00 0.00 3.36
592 647 1.358152 ACCATCACCGGAAGAAAGGA 58.642 50.000 9.46 0.00 0.00 3.36
593 648 2.200373 AACCATCACCGGAAGAAAGG 57.800 50.000 9.46 14.19 0.00 3.11
603 658 1.412343 ACCAAAGTGCAAACCATCACC 59.588 47.619 0.00 0.00 33.90 4.02
609 664 1.066502 ACACCAACCAAAGTGCAAACC 60.067 47.619 0.00 0.00 37.51 3.27
624 679 4.080413 TCTGATGCTGGAATATTCACACCA 60.080 41.667 17.07 8.21 0.00 4.17
625 680 4.454678 TCTGATGCTGGAATATTCACACC 58.545 43.478 17.07 4.09 0.00 4.16
627 682 7.012989 CAGAATTCTGATGCTGGAATATTCACA 59.987 37.037 28.13 11.71 46.59 3.58
628 683 7.361127 CAGAATTCTGATGCTGGAATATTCAC 58.639 38.462 28.13 7.28 46.59 3.18
663 718 2.814336 GGTGATCCTGAAAACAGACACC 59.186 50.000 17.00 17.00 39.38 4.16
679 734 0.033011 ACGCAGAGGTAGAGGGTGAT 60.033 55.000 0.00 0.00 0.00 3.06
684 739 1.732732 CGTTTCACGCAGAGGTAGAGG 60.733 57.143 0.00 0.00 33.65 3.69
705 760 4.199310 ACAATCTTCCGTATGGTGGAATG 58.801 43.478 0.00 6.66 44.18 2.67
753 814 6.292923 TCCCGAAAAGAAAATAGACTGTTCA 58.707 36.000 0.00 0.00 31.92 3.18
785 851 2.348411 ACAGAACCAACCAACCAGAG 57.652 50.000 0.00 0.00 0.00 3.35
804 870 1.737363 GCAAATTATTTCGGGGCGCAA 60.737 47.619 10.83 0.00 0.00 4.85
809 881 4.340950 ACATACTGGCAAATTATTTCGGGG 59.659 41.667 0.00 0.00 0.00 5.73
864 947 0.744414 GTAGCGCATCTCCCTTGCAA 60.744 55.000 11.47 0.00 40.14 4.08
865 948 1.153369 GTAGCGCATCTCCCTTGCA 60.153 57.895 11.47 0.00 40.14 4.08
877 960 2.223044 GCAGACAATAAACCTGTAGCGC 60.223 50.000 0.00 0.00 0.00 5.92
879 962 2.351726 CCGCAGACAATAAACCTGTAGC 59.648 50.000 0.00 0.00 0.00 3.58
896 979 1.141019 GAGATTCCGTAGCACCGCA 59.859 57.895 0.00 0.00 0.00 5.69
920 1003 4.910585 GGGTCCGGGCATAGCGTG 62.911 72.222 9.07 0.00 0.00 5.34
945 1032 3.686726 AGTAAGCTTTCACATGTGCTAGC 59.313 43.478 29.46 29.46 37.15 3.42
986 1073 8.758633 ACGACATGCCATATACTAATTTACTC 57.241 34.615 0.00 0.00 0.00 2.59
1163 1256 3.631250 AGTTTCCTGTCTTTGAAGGCAA 58.369 40.909 0.00 0.00 40.62 4.52
1176 1269 6.706295 AGTCCTCTTAAATCAGAGTTTCCTG 58.294 40.000 0.00 0.00 39.04 3.86
1352 1446 6.817641 TGCATATTAATTTTTGAAGGCCAGTG 59.182 34.615 5.01 0.00 0.00 3.66
1391 1485 3.189287 GTGAGTTGTATTGACAGGCCAAG 59.811 47.826 5.01 0.00 36.76 3.61
1396 1490 2.346803 CCGGTGAGTTGTATTGACAGG 58.653 52.381 0.00 0.00 36.76 4.00
1415 1509 6.258507 GCCATTTGTCACATATGAAAATTCCC 59.741 38.462 10.38 0.00 36.31 3.97
1416 1510 7.043565 AGCCATTTGTCACATATGAAAATTCC 58.956 34.615 10.38 4.01 36.31 3.01
1417 1511 8.483307 AAGCCATTTGTCACATATGAAAATTC 57.517 30.769 10.38 4.90 36.31 2.17
1419 1513 9.537192 CATAAGCCATTTGTCACATATGAAAAT 57.463 29.630 10.38 7.08 36.31 1.82
1420 1514 7.980662 CCATAAGCCATTTGTCACATATGAAAA 59.019 33.333 10.38 5.09 36.31 2.29
1421 1515 7.341512 TCCATAAGCCATTTGTCACATATGAAA 59.658 33.333 10.38 0.00 36.31 2.69
1422 1516 6.832900 TCCATAAGCCATTTGTCACATATGAA 59.167 34.615 10.38 0.00 36.31 2.57
1423 1517 6.363882 TCCATAAGCCATTTGTCACATATGA 58.636 36.000 10.38 0.00 0.00 2.15
1424 1518 6.638096 TCCATAAGCCATTTGTCACATATG 57.362 37.500 0.00 0.00 0.00 1.78
1425 1519 7.005902 TGATCCATAAGCCATTTGTCACATAT 58.994 34.615 0.00 0.00 0.00 1.78
1426 1520 6.262944 GTGATCCATAAGCCATTTGTCACATA 59.737 38.462 0.00 0.00 34.98 2.29
1427 1521 5.068198 GTGATCCATAAGCCATTTGTCACAT 59.932 40.000 0.00 0.00 34.98 3.21
1428 1522 4.398988 GTGATCCATAAGCCATTTGTCACA 59.601 41.667 0.00 0.00 34.98 3.58
1429 1523 4.202050 GGTGATCCATAAGCCATTTGTCAC 60.202 45.833 0.00 0.00 34.32 3.67
1430 1524 3.953612 GGTGATCCATAAGCCATTTGTCA 59.046 43.478 0.00 0.00 0.00 3.58
1431 1525 3.953612 TGGTGATCCATAAGCCATTTGTC 59.046 43.478 0.00 0.00 39.03 3.18
1543 1898 2.366266 CAAAAGGGGGTGGCATCATATG 59.634 50.000 0.00 0.00 0.00 1.78
1544 1899 2.681422 CAAAAGGGGGTGGCATCATAT 58.319 47.619 0.00 0.00 0.00 1.78
1545 1900 1.342874 CCAAAAGGGGGTGGCATCATA 60.343 52.381 0.00 0.00 0.00 2.15
1546 1901 0.618393 CCAAAAGGGGGTGGCATCAT 60.618 55.000 0.00 0.00 0.00 2.45
1547 1902 1.229145 CCAAAAGGGGGTGGCATCA 60.229 57.895 0.00 0.00 0.00 3.07
1548 1903 0.325577 ATCCAAAAGGGGGTGGCATC 60.326 55.000 0.00 0.00 37.22 3.91
1550 1905 0.787084 TTATCCAAAAGGGGGTGGCA 59.213 50.000 0.00 0.00 37.22 4.92
1552 1907 2.176045 GTGTTATCCAAAAGGGGGTGG 58.824 52.381 0.00 0.00 37.22 4.61
1554 1909 2.449345 ACTGTGTTATCCAAAAGGGGGT 59.551 45.455 0.00 0.00 37.22 4.95
1555 1910 3.169512 ACTGTGTTATCCAAAAGGGGG 57.830 47.619 0.00 0.00 37.22 5.40
1556 1911 6.039382 GCTATTACTGTGTTATCCAAAAGGGG 59.961 42.308 0.00 0.00 37.22 4.79
1557 1912 6.601613 TGCTATTACTGTGTTATCCAAAAGGG 59.398 38.462 0.00 0.00 38.37 3.95
1558 1913 7.336931 AGTGCTATTACTGTGTTATCCAAAAGG 59.663 37.037 0.00 0.00 0.00 3.11
1559 1914 8.268850 AGTGCTATTACTGTGTTATCCAAAAG 57.731 34.615 0.00 0.00 0.00 2.27
1560 1915 9.727859 TTAGTGCTATTACTGTGTTATCCAAAA 57.272 29.630 0.00 0.00 32.19 2.44
1561 1916 9.158233 GTTAGTGCTATTACTGTGTTATCCAAA 57.842 33.333 0.00 0.00 32.19 3.28
1562 1917 8.315482 TGTTAGTGCTATTACTGTGTTATCCAA 58.685 33.333 0.00 0.00 32.19 3.53
1565 1920 9.529325 TGATGTTAGTGCTATTACTGTGTTATC 57.471 33.333 0.00 0.00 32.19 1.75
1674 2032 0.107165 GAGGACCCCACATGTAAGGC 60.107 60.000 12.20 0.21 0.00 4.35
1677 2035 1.285280 CCTGAGGACCCCACATGTAA 58.715 55.000 0.00 0.00 0.00 2.41
1680 2038 1.511613 ATACCTGAGGACCCCACATG 58.488 55.000 4.99 0.00 0.00 3.21
1924 2282 7.377766 AGTAAATAATGATTGTTGCAGTCGT 57.622 32.000 0.00 0.00 0.00 4.34
1925 2283 8.577939 CAAAGTAAATAATGATTGTTGCAGTCG 58.422 33.333 0.00 0.00 0.00 4.18
1926 2284 8.375465 GCAAAGTAAATAATGATTGTTGCAGTC 58.625 33.333 0.00 0.00 0.00 3.51
1927 2285 7.062138 CGCAAAGTAAATAATGATTGTTGCAGT 59.938 33.333 11.44 0.00 0.00 4.40
1928 2286 7.273164 TCGCAAAGTAAATAATGATTGTTGCAG 59.727 33.333 11.44 6.78 0.00 4.41
1929 2287 7.087007 TCGCAAAGTAAATAATGATTGTTGCA 58.913 30.769 11.44 0.00 0.00 4.08
1930 2288 7.253750 CCTCGCAAAGTAAATAATGATTGTTGC 60.254 37.037 0.00 0.00 0.00 4.17
1932 2290 7.968405 GTCCTCGCAAAGTAAATAATGATTGTT 59.032 33.333 0.00 0.00 0.00 2.83
1933 2291 7.472543 GTCCTCGCAAAGTAAATAATGATTGT 58.527 34.615 0.00 0.00 0.00 2.71
1934 2292 6.628856 CGTCCTCGCAAAGTAAATAATGATTG 59.371 38.462 0.00 0.00 0.00 2.67
1935 2293 6.315393 ACGTCCTCGCAAAGTAAATAATGATT 59.685 34.615 0.00 0.00 41.18 2.57
1936 2294 5.815740 ACGTCCTCGCAAAGTAAATAATGAT 59.184 36.000 0.00 0.00 41.18 2.45
1937 2295 5.172934 ACGTCCTCGCAAAGTAAATAATGA 58.827 37.500 0.00 0.00 41.18 2.57
1938 2296 5.464965 ACGTCCTCGCAAAGTAAATAATG 57.535 39.130 0.00 0.00 41.18 1.90
1939 2297 6.815142 ACTTACGTCCTCGCAAAGTAAATAAT 59.185 34.615 0.00 0.00 41.42 1.28
1940 2298 6.089820 CACTTACGTCCTCGCAAAGTAAATAA 59.910 38.462 0.00 0.00 41.35 1.40
1941 2299 5.574055 CACTTACGTCCTCGCAAAGTAAATA 59.426 40.000 0.00 0.00 41.35 1.40
1942 2300 4.387862 CACTTACGTCCTCGCAAAGTAAAT 59.612 41.667 0.00 0.00 41.35 1.40
1943 2301 3.737266 CACTTACGTCCTCGCAAAGTAAA 59.263 43.478 0.00 0.00 41.35 2.01
1944 2302 3.243501 ACACTTACGTCCTCGCAAAGTAA 60.244 43.478 0.00 0.00 41.35 2.24
1945 2303 2.294233 ACACTTACGTCCTCGCAAAGTA 59.706 45.455 0.00 0.00 41.35 2.24
1946 2304 1.068127 ACACTTACGTCCTCGCAAAGT 59.932 47.619 0.00 0.00 42.82 2.66
1947 2305 1.455786 CACACTTACGTCCTCGCAAAG 59.544 52.381 0.00 0.00 41.18 2.77
1948 2306 1.493772 CACACTTACGTCCTCGCAAA 58.506 50.000 0.00 0.00 41.18 3.68
1949 2307 0.942410 GCACACTTACGTCCTCGCAA 60.942 55.000 0.00 0.00 41.18 4.85
1950 2308 1.372499 GCACACTTACGTCCTCGCA 60.372 57.895 0.00 0.00 41.18 5.10
1951 2309 2.092882 GGCACACTTACGTCCTCGC 61.093 63.158 0.00 0.00 41.18 5.03
1952 2310 0.732880 CTGGCACACTTACGTCCTCG 60.733 60.000 0.00 0.00 43.34 4.63
1953 2311 0.601558 TCTGGCACACTTACGTCCTC 59.398 55.000 0.00 0.00 0.00 3.71
1954 2312 0.317479 GTCTGGCACACTTACGTCCT 59.683 55.000 0.00 0.00 0.00 3.85
1955 2313 0.317479 AGTCTGGCACACTTACGTCC 59.683 55.000 0.00 0.00 0.00 4.79
1956 2314 1.419374 CAGTCTGGCACACTTACGTC 58.581 55.000 0.00 0.00 0.00 4.34
1957 2315 0.600255 GCAGTCTGGCACACTTACGT 60.600 55.000 1.14 0.00 0.00 3.57
1958 2316 0.319900 AGCAGTCTGGCACACTTACG 60.320 55.000 1.14 0.00 35.83 3.18
1959 2317 2.743636 TAGCAGTCTGGCACACTTAC 57.256 50.000 1.14 0.00 35.83 2.34
1960 2318 3.762407 TTTAGCAGTCTGGCACACTTA 57.238 42.857 1.14 0.00 35.83 2.24
1961 2319 2.638480 TTTAGCAGTCTGGCACACTT 57.362 45.000 1.14 0.00 35.83 3.16
1962 2320 2.816087 CAATTTAGCAGTCTGGCACACT 59.184 45.455 1.14 0.00 35.83 3.55
1963 2321 2.554032 ACAATTTAGCAGTCTGGCACAC 59.446 45.455 1.14 0.00 35.83 3.82
1964 2322 2.862541 ACAATTTAGCAGTCTGGCACA 58.137 42.857 1.14 0.00 35.83 4.57
1965 2323 3.923017 AACAATTTAGCAGTCTGGCAC 57.077 42.857 1.14 0.00 35.83 5.01
1966 2324 4.935352 AAAACAATTTAGCAGTCTGGCA 57.065 36.364 1.14 0.00 35.83 4.92
1967 2325 9.586435 AATAATAAAACAATTTAGCAGTCTGGC 57.414 29.630 1.14 0.00 34.62 4.85
1993 2351 9.901651 TGTTATCCCCTAGTTTATATTGTAGGA 57.098 33.333 0.00 0.00 34.99 2.94
1994 2352 9.939802 GTGTTATCCCCTAGTTTATATTGTAGG 57.060 37.037 0.00 0.00 33.10 3.18
1997 2355 8.999895 ACAGTGTTATCCCCTAGTTTATATTGT 58.000 33.333 0.00 0.00 0.00 2.71
1998 2356 9.490379 GACAGTGTTATCCCCTAGTTTATATTG 57.510 37.037 0.00 0.00 0.00 1.90
1999 2357 8.657712 GGACAGTGTTATCCCCTAGTTTATATT 58.342 37.037 0.00 0.00 0.00 1.28
2000 2358 8.203681 GGACAGTGTTATCCCCTAGTTTATAT 57.796 38.462 0.00 0.00 0.00 0.86
2001 2359 7.607615 GGACAGTGTTATCCCCTAGTTTATA 57.392 40.000 0.00 0.00 0.00 0.98
2002 2360 6.496144 GGACAGTGTTATCCCCTAGTTTAT 57.504 41.667 0.00 0.00 0.00 1.40
2003 2361 5.945144 GGACAGTGTTATCCCCTAGTTTA 57.055 43.478 0.00 0.00 0.00 2.01
2004 2362 4.838904 GGACAGTGTTATCCCCTAGTTT 57.161 45.455 0.00 0.00 0.00 2.66
2012 2370 7.746703 AGGAATTTATAGGGACAGTGTTATCC 58.253 38.462 0.00 0.00 0.00 2.59
2013 2371 9.628500 AAAGGAATTTATAGGGACAGTGTTATC 57.372 33.333 0.00 0.00 0.00 1.75
2014 2372 9.990868 AAAAGGAATTTATAGGGACAGTGTTAT 57.009 29.630 0.00 0.00 0.00 1.89
2015 2373 9.816787 AAAAAGGAATTTATAGGGACAGTGTTA 57.183 29.630 0.00 0.00 0.00 2.41
2016 2374 8.721133 AAAAAGGAATTTATAGGGACAGTGTT 57.279 30.769 0.00 0.00 0.00 3.32
2100 2458 1.148498 GGCTCGGACTTAATGGGGG 59.852 63.158 0.00 0.00 0.00 5.40
2101 2459 0.474184 ATGGCTCGGACTTAATGGGG 59.526 55.000 0.00 0.00 0.00 4.96
2102 2460 2.632996 TCTATGGCTCGGACTTAATGGG 59.367 50.000 0.00 0.00 0.00 4.00
2103 2461 3.322254 ACTCTATGGCTCGGACTTAATGG 59.678 47.826 0.00 0.00 0.00 3.16
2104 2462 4.592485 ACTCTATGGCTCGGACTTAATG 57.408 45.455 0.00 0.00 0.00 1.90
2105 2463 6.069331 TCTTACTCTATGGCTCGGACTTAAT 58.931 40.000 0.00 0.00 0.00 1.40
2106 2464 5.443283 TCTTACTCTATGGCTCGGACTTAA 58.557 41.667 0.00 0.00 0.00 1.85
2107 2465 5.045012 TCTTACTCTATGGCTCGGACTTA 57.955 43.478 0.00 0.00 0.00 2.24
2108 2466 3.886505 CTCTTACTCTATGGCTCGGACTT 59.113 47.826 0.00 0.00 0.00 3.01
2109 2467 3.117813 ACTCTTACTCTATGGCTCGGACT 60.118 47.826 0.00 0.00 0.00 3.85
2110 2468 3.003897 CACTCTTACTCTATGGCTCGGAC 59.996 52.174 0.00 0.00 0.00 4.79
2111 2469 3.118000 TCACTCTTACTCTATGGCTCGGA 60.118 47.826 0.00 0.00 0.00 4.55
2112 2470 3.215151 TCACTCTTACTCTATGGCTCGG 58.785 50.000 0.00 0.00 0.00 4.63
2113 2471 4.130857 TCTCACTCTTACTCTATGGCTCG 58.869 47.826 0.00 0.00 0.00 5.03
2114 2472 5.767665 TCATCTCACTCTTACTCTATGGCTC 59.232 44.000 0.00 0.00 0.00 4.70
2115 2473 5.700183 TCATCTCACTCTTACTCTATGGCT 58.300 41.667 0.00 0.00 0.00 4.75
2116 2474 5.534654 ACTCATCTCACTCTTACTCTATGGC 59.465 44.000 0.00 0.00 0.00 4.40
2117 2475 7.581213 AACTCATCTCACTCTTACTCTATGG 57.419 40.000 0.00 0.00 0.00 2.74
2118 2476 9.515020 GAAAACTCATCTCACTCTTACTCTATG 57.485 37.037 0.00 0.00 0.00 2.23
2119 2477 8.691797 GGAAAACTCATCTCACTCTTACTCTAT 58.308 37.037 0.00 0.00 0.00 1.98
2120 2478 7.670140 TGGAAAACTCATCTCACTCTTACTCTA 59.330 37.037 0.00 0.00 0.00 2.43
2121 2479 6.495181 TGGAAAACTCATCTCACTCTTACTCT 59.505 38.462 0.00 0.00 0.00 3.24
2122 2480 6.692486 TGGAAAACTCATCTCACTCTTACTC 58.308 40.000 0.00 0.00 0.00 2.59
2123 2481 6.672266 TGGAAAACTCATCTCACTCTTACT 57.328 37.500 0.00 0.00 0.00 2.24
2124 2482 7.730364 TTTGGAAAACTCATCTCACTCTTAC 57.270 36.000 0.00 0.00 0.00 2.34
2125 2483 8.924511 AATTTGGAAAACTCATCTCACTCTTA 57.075 30.769 0.00 0.00 0.00 2.10
2126 2484 7.503566 TGAATTTGGAAAACTCATCTCACTCTT 59.496 33.333 0.00 0.00 0.00 2.85
2127 2485 7.000472 TGAATTTGGAAAACTCATCTCACTCT 59.000 34.615 0.00 0.00 0.00 3.24
2128 2486 7.206981 TGAATTTGGAAAACTCATCTCACTC 57.793 36.000 0.00 0.00 0.00 3.51
2129 2487 7.449395 TGATGAATTTGGAAAACTCATCTCACT 59.551 33.333 19.12 0.00 39.54 3.41
2130 2488 7.596494 TGATGAATTTGGAAAACTCATCTCAC 58.404 34.615 19.12 1.60 39.54 3.51
2131 2489 7.764141 TGATGAATTTGGAAAACTCATCTCA 57.236 32.000 19.12 5.11 39.54 3.27
2132 2490 9.947669 CTATGATGAATTTGGAAAACTCATCTC 57.052 33.333 19.12 3.05 39.54 2.75
2133 2491 9.690913 TCTATGATGAATTTGGAAAACTCATCT 57.309 29.630 19.12 10.92 39.54 2.90
2134 2492 9.727627 GTCTATGATGAATTTGGAAAACTCATC 57.272 33.333 14.18 14.18 39.41 2.92
2135 2493 9.471702 AGTCTATGATGAATTTGGAAAACTCAT 57.528 29.630 0.00 0.00 31.25 2.90
2136 2494 8.868522 AGTCTATGATGAATTTGGAAAACTCA 57.131 30.769 0.00 0.00 0.00 3.41
2137 2495 9.171877 AGAGTCTATGATGAATTTGGAAAACTC 57.828 33.333 0.00 0.00 0.00 3.01
2138 2496 9.171877 GAGAGTCTATGATGAATTTGGAAAACT 57.828 33.333 0.00 0.00 0.00 2.66
2139 2497 8.401709 GGAGAGTCTATGATGAATTTGGAAAAC 58.598 37.037 0.00 0.00 0.00 2.43
2140 2498 7.557719 GGGAGAGTCTATGATGAATTTGGAAAA 59.442 37.037 0.00 0.00 0.00 2.29
2141 2499 7.056635 GGGAGAGTCTATGATGAATTTGGAAA 58.943 38.462 0.00 0.00 0.00 3.13
2142 2500 6.388100 AGGGAGAGTCTATGATGAATTTGGAA 59.612 38.462 0.00 0.00 0.00 3.53
2143 2501 5.907662 AGGGAGAGTCTATGATGAATTTGGA 59.092 40.000 0.00 0.00 0.00 3.53
2144 2502 6.185114 AGGGAGAGTCTATGATGAATTTGG 57.815 41.667 0.00 0.00 0.00 3.28
2145 2503 7.823310 CCATAGGGAGAGTCTATGATGAATTTG 59.177 40.741 11.36 0.00 43.98 2.32
2146 2504 7.528543 GCCATAGGGAGAGTCTATGATGAATTT 60.529 40.741 0.00 0.00 43.98 1.82
2147 2505 6.070309 GCCATAGGGAGAGTCTATGATGAATT 60.070 42.308 0.00 0.00 43.98 2.17
2148 2506 5.424895 GCCATAGGGAGAGTCTATGATGAAT 59.575 44.000 0.00 0.00 43.98 2.57
2149 2507 4.774726 GCCATAGGGAGAGTCTATGATGAA 59.225 45.833 0.00 0.00 43.98 2.57
2150 2508 4.045207 AGCCATAGGGAGAGTCTATGATGA 59.955 45.833 0.00 0.00 43.98 2.92
2151 2509 4.352009 AGCCATAGGGAGAGTCTATGATG 58.648 47.826 0.00 0.00 43.98 3.07
2152 2510 4.690767 AGCCATAGGGAGAGTCTATGAT 57.309 45.455 0.00 0.00 43.98 2.45
2153 2511 4.140924 TCAAGCCATAGGGAGAGTCTATGA 60.141 45.833 0.00 0.00 43.98 2.15
2154 2512 4.155709 TCAAGCCATAGGGAGAGTCTATG 58.844 47.826 0.00 0.00 42.06 2.23
2155 2513 4.477536 TCAAGCCATAGGGAGAGTCTAT 57.522 45.455 0.00 0.00 35.59 1.98
2156 2514 3.973472 TCAAGCCATAGGGAGAGTCTA 57.027 47.619 0.00 0.00 35.59 2.59
2157 2515 2.856760 TCAAGCCATAGGGAGAGTCT 57.143 50.000 0.00 0.00 35.59 3.24
2158 2516 3.513515 CCTATCAAGCCATAGGGAGAGTC 59.486 52.174 0.00 0.00 41.35 3.36
2159 2517 3.142977 TCCTATCAAGCCATAGGGAGAGT 59.857 47.826 0.00 0.00 44.14 3.24
2160 2518 3.768757 CTCCTATCAAGCCATAGGGAGAG 59.231 52.174 0.00 2.18 44.14 3.20
2161 2519 3.142977 ACTCCTATCAAGCCATAGGGAGA 59.857 47.826 12.23 0.00 44.14 3.71
2162 2520 3.515562 ACTCCTATCAAGCCATAGGGAG 58.484 50.000 0.00 9.77 44.14 4.30
2163 2521 3.637821 ACTCCTATCAAGCCATAGGGA 57.362 47.619 0.00 0.00 44.14 4.20
2164 2522 5.087323 TCTTACTCCTATCAAGCCATAGGG 58.913 45.833 12.08 0.00 44.14 3.53
2165 2523 6.672266 TTCTTACTCCTATCAAGCCATAGG 57.328 41.667 7.41 7.41 45.03 2.57
2166 2524 6.162777 GCTTCTTACTCCTATCAAGCCATAG 58.837 44.000 0.00 0.00 31.88 2.23
2167 2525 5.602561 TGCTTCTTACTCCTATCAAGCCATA 59.397 40.000 0.00 0.00 36.27 2.74
2168 2526 4.410228 TGCTTCTTACTCCTATCAAGCCAT 59.590 41.667 0.00 0.00 36.27 4.40
2169 2527 3.774766 TGCTTCTTACTCCTATCAAGCCA 59.225 43.478 0.00 0.00 36.27 4.75
2170 2528 4.408182 TGCTTCTTACTCCTATCAAGCC 57.592 45.455 0.00 0.00 36.27 4.35
2171 2529 6.109359 TCTTTGCTTCTTACTCCTATCAAGC 58.891 40.000 0.00 0.00 37.38 4.01
2172 2530 7.327214 ACTCTTTGCTTCTTACTCCTATCAAG 58.673 38.462 0.00 0.00 0.00 3.02
2173 2531 7.246171 ACTCTTTGCTTCTTACTCCTATCAA 57.754 36.000 0.00 0.00 0.00 2.57
2174 2532 6.859112 ACTCTTTGCTTCTTACTCCTATCA 57.141 37.500 0.00 0.00 0.00 2.15
2175 2533 7.100409 ACAACTCTTTGCTTCTTACTCCTATC 58.900 38.462 0.00 0.00 36.00 2.08
2176 2534 7.010339 ACAACTCTTTGCTTCTTACTCCTAT 57.990 36.000 0.00 0.00 36.00 2.57
2177 2535 6.420913 ACAACTCTTTGCTTCTTACTCCTA 57.579 37.500 0.00 0.00 36.00 2.94
2178 2536 5.297569 ACAACTCTTTGCTTCTTACTCCT 57.702 39.130 0.00 0.00 36.00 3.69
2179 2537 6.706716 AGTTACAACTCTTTGCTTCTTACTCC 59.293 38.462 0.00 0.00 36.00 3.85
2180 2538 7.716768 AGTTACAACTCTTTGCTTCTTACTC 57.283 36.000 0.00 0.00 36.00 2.59
2181 2539 7.012421 CCAAGTTACAACTCTTTGCTTCTTACT 59.988 37.037 0.00 0.00 38.57 2.24
2182 2540 7.132863 CCAAGTTACAACTCTTTGCTTCTTAC 58.867 38.462 0.00 0.00 38.57 2.34
2183 2541 6.238648 GCCAAGTTACAACTCTTTGCTTCTTA 60.239 38.462 0.00 0.00 38.57 2.10
2184 2542 5.450550 GCCAAGTTACAACTCTTTGCTTCTT 60.451 40.000 0.00 0.00 38.57 2.52
2185 2543 4.036852 GCCAAGTTACAACTCTTTGCTTCT 59.963 41.667 0.00 0.00 38.57 2.85
2186 2544 4.202010 TGCCAAGTTACAACTCTTTGCTTC 60.202 41.667 0.00 0.00 38.57 3.86
2187 2545 3.699038 TGCCAAGTTACAACTCTTTGCTT 59.301 39.130 0.00 0.00 38.57 3.91
2188 2546 3.287222 TGCCAAGTTACAACTCTTTGCT 58.713 40.909 0.00 0.00 38.57 3.91
2189 2547 3.708563 TGCCAAGTTACAACTCTTTGC 57.291 42.857 0.00 0.00 38.57 3.68
2190 2548 6.959671 TTTTTGCCAAGTTACAACTCTTTG 57.040 33.333 0.00 0.00 38.57 2.77
2214 2572 5.306678 TCACAAAAGGTGCATAAATCCCTTT 59.693 36.000 10.19 10.19 46.53 3.11
2215 2573 5.151297 CACAAAAGGTGCATAAATCCCTT 57.849 39.130 0.00 0.00 41.36 3.95
2216 2574 4.806640 CACAAAAGGTGCATAAATCCCT 57.193 40.909 0.00 0.00 41.36 4.20
2334 2696 8.584157 TGTGCTGGAACATATTTTAATTGAAGT 58.416 29.630 0.00 0.00 38.20 3.01
2336 2698 8.584157 AGTGTGCTGGAACATATTTTAATTGAA 58.416 29.630 0.00 0.00 38.20 2.69
2370 2732 4.330074 CAGCTTCTATGTTAGGTTGTTCCG 59.670 45.833 0.00 0.00 41.99 4.30
2445 2809 2.936498 CGAGTAACATCAACATGACCCC 59.064 50.000 0.00 0.00 33.72 4.95
2453 2817 9.909644 ACATAATAGTATCCGAGTAACATCAAC 57.090 33.333 0.00 0.00 0.00 3.18
2481 2845 5.181690 GTGAATTACAGCACACCAAAAGA 57.818 39.130 0.00 0.00 35.19 2.52
2508 2872 5.525378 CCTAAAAACGATCTTCTATGCAGCT 59.475 40.000 0.00 0.00 0.00 4.24
2527 2891 7.149202 AGCCACACCATATATCTTTCCTAAA 57.851 36.000 0.00 0.00 0.00 1.85
2548 2914 7.284034 TGGATCTTTTCTTCTGATAATCAAGCC 59.716 37.037 0.00 0.00 0.00 4.35
2650 3024 4.373156 ACTATGGAAATGAGTATGGCCC 57.627 45.455 0.00 0.00 0.00 5.80
2708 3085 9.273016 CTTAGAAGTTGTGTTCAAGGAAGATAA 57.727 33.333 0.00 0.00 33.97 1.75
2952 3329 3.447944 AGAAGAGGACGGGAATACTTGAC 59.552 47.826 0.00 0.00 0.00 3.18
2964 3341 3.576648 GTCAGTTTACCAGAAGAGGACG 58.423 50.000 0.00 0.00 0.00 4.79
2990 3367 5.581479 CACTGAATTGACCATCAGAAGAGAG 59.419 44.000 9.56 0.00 44.64 3.20
2991 3368 5.485620 CACTGAATTGACCATCAGAAGAGA 58.514 41.667 9.56 0.00 44.64 3.10
3074 3451 8.875803 ACTAAACATAATACATGTACAACCACG 58.124 33.333 7.96 0.00 0.00 4.94
3234 3611 9.307121 CAGAATGACTAATCAAAGTAGGTACTG 57.693 37.037 0.00 0.00 37.64 2.74
3377 3754 6.658188 AGGATAGGACTTGATTACAGCTAC 57.342 41.667 0.00 0.00 0.00 3.58
3454 3832 1.893808 CTGCCACGGTTGCTTCTGT 60.894 57.895 5.76 0.00 0.00 3.41
3467 3845 3.700538 ACATCTTTATTCCTTGCTGCCA 58.299 40.909 0.00 0.00 0.00 4.92
3516 3894 2.057316 TGATTTGACAAAATTGCGCCG 58.943 42.857 4.18 0.00 36.10 6.46
3588 3966 1.819632 CGGTGTGCCTATTGCCCTC 60.820 63.158 0.00 0.00 40.16 4.30
4037 4428 2.945668 GTCCATGTTTCCAGATACTGCC 59.054 50.000 0.00 0.00 0.00 4.85
4060 4451 4.098416 GGAGAAAATTCAATTCGGCTTCG 58.902 43.478 0.00 0.00 32.04 3.79
4105 4496 7.223582 CCAGTATCACTGTACTAAGATGCAAAG 59.776 40.741 5.65 0.00 44.50 2.77
4137 4528 5.615925 AGGACACTATCAAATGGAGTACC 57.384 43.478 0.00 0.00 0.00 3.34
4523 4921 1.570813 CTGACTTGCTTGTGTCGTCA 58.429 50.000 0.00 0.00 36.10 4.35
4553 4951 1.079612 CTCGCTGTGCTCCATGTGA 60.080 57.895 0.00 0.00 0.00 3.58
4713 5119 1.248785 ACCTACACTGTCACGCCGAT 61.249 55.000 0.00 0.00 0.00 4.18
4714 5120 0.606130 TACCTACACTGTCACGCCGA 60.606 55.000 0.00 0.00 0.00 5.54
4796 5202 2.793933 GCCTAAAGTACAGTAGCCGTCG 60.794 54.545 0.00 0.00 0.00 5.12
5082 5489 0.391661 AGATGTACCTTGTGCCAGCG 60.392 55.000 0.00 0.00 0.00 5.18
5150 5557 6.040166 ACCAATATCATAGACGACTTTACGGT 59.960 38.462 0.00 0.00 37.61 4.83
5176 5583 9.953565 AGTGGTAGTTTTATGCTATTTACTCAA 57.046 29.630 0.00 0.00 0.00 3.02
5177 5584 9.953565 AAGTGGTAGTTTTATGCTATTTACTCA 57.046 29.630 0.00 0.00 0.00 3.41
5182 5589 8.789762 ACGAAAAGTGGTAGTTTTATGCTATTT 58.210 29.630 0.00 0.00 31.40 1.40
5183 5590 8.234546 CACGAAAAGTGGTAGTTTTATGCTATT 58.765 33.333 0.00 0.00 46.77 1.73
5184 5591 7.748847 CACGAAAAGTGGTAGTTTTATGCTAT 58.251 34.615 0.00 0.00 46.77 2.97
5185 5592 7.124347 CACGAAAAGTGGTAGTTTTATGCTA 57.876 36.000 0.00 0.00 46.77 3.49
5186 5593 5.997385 CACGAAAAGTGGTAGTTTTATGCT 58.003 37.500 0.00 0.00 46.77 3.79
5200 5607 4.612264 TTAGAACCCTAGCACGAAAAGT 57.388 40.909 0.00 0.00 0.00 2.66
5201 5608 5.934935 TTTTAGAACCCTAGCACGAAAAG 57.065 39.130 0.00 0.00 0.00 2.27
5234 5641 8.885722 GTGATAGGTATCCGTCATAAACAAAAA 58.114 33.333 0.00 0.00 31.71 1.94
5235 5642 8.262227 AGTGATAGGTATCCGTCATAAACAAAA 58.738 33.333 0.00 0.00 31.71 2.44
5236 5643 7.788026 AGTGATAGGTATCCGTCATAAACAAA 58.212 34.615 0.00 0.00 31.71 2.83
5237 5644 7.356089 AGTGATAGGTATCCGTCATAAACAA 57.644 36.000 0.00 0.00 31.71 2.83
5238 5645 6.971726 AGTGATAGGTATCCGTCATAAACA 57.028 37.500 0.00 0.00 31.71 2.83
5239 5646 7.659186 AGAAGTGATAGGTATCCGTCATAAAC 58.341 38.462 0.00 0.00 31.71 2.01
5240 5647 7.504574 TGAGAAGTGATAGGTATCCGTCATAAA 59.495 37.037 0.00 0.00 31.71 1.40
5241 5648 7.002276 TGAGAAGTGATAGGTATCCGTCATAA 58.998 38.462 0.00 0.00 31.71 1.90
5242 5649 6.540083 TGAGAAGTGATAGGTATCCGTCATA 58.460 40.000 0.00 0.00 31.71 2.15
5243 5650 5.386060 TGAGAAGTGATAGGTATCCGTCAT 58.614 41.667 0.00 0.00 31.71 3.06
5244 5651 4.788679 TGAGAAGTGATAGGTATCCGTCA 58.211 43.478 0.00 0.00 31.71 4.35
5245 5652 5.769484 TTGAGAAGTGATAGGTATCCGTC 57.231 43.478 0.00 0.00 31.71 4.79
5246 5653 6.540438 TTTTGAGAAGTGATAGGTATCCGT 57.460 37.500 0.00 0.00 31.71 4.69
5267 5674 0.753867 AACGGGCGATTTGGGTTTTT 59.246 45.000 0.00 0.00 0.00 1.94
5268 5675 0.032815 CAACGGGCGATTTGGGTTTT 59.967 50.000 0.00 0.00 0.00 2.43
5269 5676 1.663173 CAACGGGCGATTTGGGTTT 59.337 52.632 0.00 0.00 0.00 3.27
5270 5677 2.926420 GCAACGGGCGATTTGGGTT 61.926 57.895 0.00 0.00 0.00 4.11
5271 5678 3.370231 GCAACGGGCGATTTGGGT 61.370 61.111 0.00 0.00 0.00 4.51
5280 5687 1.442017 CAAAACGCTAGCAACGGGC 60.442 57.895 16.45 0.00 45.30 6.13
5281 5688 0.589223 TTCAAAACGCTAGCAACGGG 59.411 50.000 16.45 0.00 34.00 5.28
5282 5689 1.662026 GGTTCAAAACGCTAGCAACGG 60.662 52.381 16.45 0.05 34.00 4.44
5283 5690 1.670326 GGTTCAAAACGCTAGCAACG 58.330 50.000 16.45 0.46 0.00 4.10
5284 5691 1.003223 ACGGTTCAAAACGCTAGCAAC 60.003 47.619 16.45 10.01 0.00 4.17
5285 5692 1.301423 ACGGTTCAAAACGCTAGCAA 58.699 45.000 16.45 0.00 0.00 3.91
5286 5693 1.301423 AACGGTTCAAAACGCTAGCA 58.699 45.000 16.45 0.00 0.00 3.49
5287 5694 2.394545 AAACGGTTCAAAACGCTAGC 57.605 45.000 4.06 4.06 0.00 3.42
5288 5695 3.966218 CAGAAAACGGTTCAAAACGCTAG 59.034 43.478 0.00 0.00 0.00 3.42
5289 5696 3.622163 TCAGAAAACGGTTCAAAACGCTA 59.378 39.130 0.00 0.00 0.00 4.26
5290 5697 2.420722 TCAGAAAACGGTTCAAAACGCT 59.579 40.909 0.00 0.00 0.00 5.07
5291 5698 2.528688 GTCAGAAAACGGTTCAAAACGC 59.471 45.455 0.00 0.00 0.00 4.84
5292 5699 2.774074 CGTCAGAAAACGGTTCAAAACG 59.226 45.455 0.00 0.00 38.96 3.60
5302 5709 2.025418 CCCGGACCGTCAGAAAACG 61.025 63.158 13.94 0.00 42.24 3.60
5303 5710 2.322830 GCCCGGACCGTCAGAAAAC 61.323 63.158 13.94 0.00 0.00 2.43
5304 5711 2.031465 GCCCGGACCGTCAGAAAA 59.969 61.111 13.94 0.00 0.00 2.29
5305 5712 4.011517 GGCCCGGACCGTCAGAAA 62.012 66.667 13.94 0.00 0.00 2.52
5325 5732 1.227380 GCTGACGTGGCCTGATAGG 60.227 63.158 3.32 0.00 38.80 2.57
5326 5733 1.589993 CGCTGACGTGGCCTGATAG 60.590 63.158 3.32 2.24 33.53 2.08
5327 5734 2.494445 CGCTGACGTGGCCTGATA 59.506 61.111 3.32 0.00 33.53 2.15
5364 5771 1.983160 CGAGTAACGGCCGTTAACG 59.017 57.895 43.23 40.22 41.51 3.18
5415 5822 0.805711 GAGAGAGAAAGGCAGCGAGC 60.806 60.000 0.00 0.00 44.65 5.03
5416 5823 0.817013 AGAGAGAGAAAGGCAGCGAG 59.183 55.000 0.00 0.00 0.00 5.03
5417 5824 0.529833 CAGAGAGAGAAAGGCAGCGA 59.470 55.000 0.00 0.00 0.00 4.93
5418 5825 0.246086 ACAGAGAGAGAAAGGCAGCG 59.754 55.000 0.00 0.00 0.00 5.18
5419 5826 1.735369 CGACAGAGAGAGAAAGGCAGC 60.735 57.143 0.00 0.00 0.00 5.25
5420 5827 1.135141 CCGACAGAGAGAGAAAGGCAG 60.135 57.143 0.00 0.00 0.00 4.85
5421 5828 0.891373 CCGACAGAGAGAGAAAGGCA 59.109 55.000 0.00 0.00 0.00 4.75
5422 5829 0.459411 GCCGACAGAGAGAGAAAGGC 60.459 60.000 0.00 0.00 36.32 4.35
5423 5830 0.891373 TGCCGACAGAGAGAGAAAGG 59.109 55.000 0.00 0.00 0.00 3.11
5435 5842 0.682532 AGAGAGAGATGCTGCCGACA 60.683 55.000 0.00 0.00 0.00 4.35
5436 5843 0.030638 GAGAGAGAGATGCTGCCGAC 59.969 60.000 0.00 0.00 0.00 4.79
5437 5844 0.106769 AGAGAGAGAGATGCTGCCGA 60.107 55.000 0.00 0.00 0.00 5.54
5438 5845 0.311790 GAGAGAGAGAGATGCTGCCG 59.688 60.000 0.00 0.00 0.00 5.69
5439 5846 0.311790 CGAGAGAGAGAGATGCTGCC 59.688 60.000 0.00 0.00 0.00 4.85
5440 5847 0.318107 GCGAGAGAGAGAGATGCTGC 60.318 60.000 0.00 0.00 0.00 5.25
5441 5848 1.265095 GAGCGAGAGAGAGAGATGCTG 59.735 57.143 0.00 0.00 0.00 4.41
5442 5849 1.597742 GAGCGAGAGAGAGAGATGCT 58.402 55.000 0.00 0.00 0.00 3.79
5443 5850 0.593128 GGAGCGAGAGAGAGAGATGC 59.407 60.000 0.00 0.00 0.00 3.91
5444 5851 2.146342 GAGGAGCGAGAGAGAGAGATG 58.854 57.143 0.00 0.00 0.00 2.90
5445 5852 1.072331 GGAGGAGCGAGAGAGAGAGAT 59.928 57.143 0.00 0.00 0.00 2.75
5446 5853 0.468226 GGAGGAGCGAGAGAGAGAGA 59.532 60.000 0.00 0.00 0.00 3.10
5447 5854 0.469917 AGGAGGAGCGAGAGAGAGAG 59.530 60.000 0.00 0.00 0.00 3.20
5448 5855 0.916086 AAGGAGGAGCGAGAGAGAGA 59.084 55.000 0.00 0.00 0.00 3.10
5449 5856 1.676006 GAAAGGAGGAGCGAGAGAGAG 59.324 57.143 0.00 0.00 0.00 3.20
5450 5857 1.683629 GGAAAGGAGGAGCGAGAGAGA 60.684 57.143 0.00 0.00 0.00 3.10
5451 5858 0.744281 GGAAAGGAGGAGCGAGAGAG 59.256 60.000 0.00 0.00 0.00 3.20
5452 5859 0.684805 GGGAAAGGAGGAGCGAGAGA 60.685 60.000 0.00 0.00 0.00 3.10
5453 5860 1.681486 GGGGAAAGGAGGAGCGAGAG 61.681 65.000 0.00 0.00 0.00 3.20
5454 5861 1.686110 GGGGAAAGGAGGAGCGAGA 60.686 63.158 0.00 0.00 0.00 4.04
5455 5862 2.736826 GGGGGAAAGGAGGAGCGAG 61.737 68.421 0.00 0.00 0.00 5.03
5456 5863 2.687566 GGGGGAAAGGAGGAGCGA 60.688 66.667 0.00 0.00 0.00 4.93
5457 5864 4.162690 CGGGGGAAAGGAGGAGCG 62.163 72.222 0.00 0.00 0.00 5.03
5458 5865 3.009714 ACGGGGGAAAGGAGGAGC 61.010 66.667 0.00 0.00 0.00 4.70
5459 5866 2.990479 CACGGGGGAAAGGAGGAG 59.010 66.667 0.00 0.00 0.00 3.69
5460 5867 3.327404 GCACGGGGGAAAGGAGGA 61.327 66.667 0.00 0.00 0.00 3.71
5461 5868 3.330720 AGCACGGGGGAAAGGAGG 61.331 66.667 0.00 0.00 0.00 4.30
5462 5869 2.245438 GAGAGCACGGGGGAAAGGAG 62.245 65.000 0.00 0.00 0.00 3.69
5463 5870 2.203938 AGAGCACGGGGGAAAGGA 60.204 61.111 0.00 0.00 0.00 3.36
5464 5871 2.269241 GAGAGCACGGGGGAAAGG 59.731 66.667 0.00 0.00 0.00 3.11
5465 5872 1.078848 CAGAGAGCACGGGGGAAAG 60.079 63.158 0.00 0.00 0.00 2.62
5466 5873 1.827399 GACAGAGAGCACGGGGGAAA 61.827 60.000 0.00 0.00 0.00 3.13
5467 5874 2.203788 ACAGAGAGCACGGGGGAA 60.204 61.111 0.00 0.00 0.00 3.97
5468 5875 2.680352 GACAGAGAGCACGGGGGA 60.680 66.667 0.00 0.00 0.00 4.81
5469 5876 2.681778 AGACAGAGAGCACGGGGG 60.682 66.667 0.00 0.00 0.00 5.40
5470 5877 1.662438 GAGAGACAGAGAGCACGGGG 61.662 65.000 0.00 0.00 0.00 5.73
5471 5878 1.662438 GGAGAGACAGAGAGCACGGG 61.662 65.000 0.00 0.00 0.00 5.28
5472 5879 1.662438 GGGAGAGACAGAGAGCACGG 61.662 65.000 0.00 0.00 0.00 4.94
5473 5880 1.806568 GGGAGAGACAGAGAGCACG 59.193 63.158 0.00 0.00 0.00 5.34
5474 5881 0.678366 TCGGGAGAGACAGAGAGCAC 60.678 60.000 0.00 0.00 0.00 4.40
5475 5882 0.678366 GTCGGGAGAGACAGAGAGCA 60.678 60.000 0.00 0.00 41.26 4.26
5476 5883 1.711060 CGTCGGGAGAGACAGAGAGC 61.711 65.000 0.00 0.00 40.98 4.09
5477 5884 0.108089 TCGTCGGGAGAGACAGAGAG 60.108 60.000 0.00 0.00 40.98 3.20
5478 5885 0.542333 ATCGTCGGGAGAGACAGAGA 59.458 55.000 0.00 0.00 40.98 3.10
5479 5886 0.660488 CATCGTCGGGAGAGACAGAG 59.340 60.000 0.00 0.00 40.98 3.35
5480 5887 0.748367 CCATCGTCGGGAGAGACAGA 60.748 60.000 0.00 0.00 40.98 3.41
5481 5888 1.730487 CCATCGTCGGGAGAGACAG 59.270 63.158 0.00 0.00 40.98 3.51
5482 5889 2.415608 GCCATCGTCGGGAGAGACA 61.416 63.158 0.00 0.00 40.98 3.41
5483 5890 2.413765 GCCATCGTCGGGAGAGAC 59.586 66.667 0.00 0.00 41.26 3.36
5484 5891 3.209812 CGCCATCGTCGGGAGAGA 61.210 66.667 0.00 0.00 41.26 3.10
5485 5892 4.271816 CCGCCATCGTCGGGAGAG 62.272 72.222 0.00 0.00 42.99 3.20
5499 5906 3.854459 CTTCTTCTTCGCCGCCGC 61.854 66.667 0.00 0.00 0.00 6.53
5500 5907 3.188786 CCTTCTTCTTCGCCGCCG 61.189 66.667 0.00 0.00 0.00 6.46
5501 5908 2.101233 GTCCTTCTTCTTCGCCGCC 61.101 63.158 0.00 0.00 0.00 6.13
5502 5909 2.445438 CGTCCTTCTTCTTCGCCGC 61.445 63.158 0.00 0.00 0.00 6.53
5503 5910 0.179134 ATCGTCCTTCTTCTTCGCCG 60.179 55.000 0.00 0.00 0.00 6.46
5504 5911 1.281899 CATCGTCCTTCTTCTTCGCC 58.718 55.000 0.00 0.00 0.00 5.54
5505 5912 1.281899 CCATCGTCCTTCTTCTTCGC 58.718 55.000 0.00 0.00 0.00 4.70
5506 5913 1.281899 GCCATCGTCCTTCTTCTTCG 58.718 55.000 0.00 0.00 0.00 3.79
5507 5914 1.135083 TCGCCATCGTCCTTCTTCTTC 60.135 52.381 0.00 0.00 36.96 2.87
5508 5915 0.895530 TCGCCATCGTCCTTCTTCTT 59.104 50.000 0.00 0.00 36.96 2.52
5509 5916 0.457851 CTCGCCATCGTCCTTCTTCT 59.542 55.000 0.00 0.00 36.96 2.85
5510 5917 1.148759 GCTCGCCATCGTCCTTCTTC 61.149 60.000 0.00 0.00 36.96 2.87
5511 5918 1.153549 GCTCGCCATCGTCCTTCTT 60.154 57.895 0.00 0.00 36.96 2.52
5512 5919 2.496817 GCTCGCCATCGTCCTTCT 59.503 61.111 0.00 0.00 36.96 2.85
5513 5920 2.586357 GGCTCGCCATCGTCCTTC 60.586 66.667 2.41 0.00 36.96 3.46
5514 5921 3.077556 AGGCTCGCCATCGTCCTT 61.078 61.111 11.02 0.00 36.78 3.36
5515 5922 3.842923 CAGGCTCGCCATCGTCCT 61.843 66.667 11.02 0.00 39.12 3.85
5516 5923 4.899239 CCAGGCTCGCCATCGTCC 62.899 72.222 11.02 0.00 38.92 4.79
5517 5924 4.899239 CCCAGGCTCGCCATCGTC 62.899 72.222 11.02 0.00 38.92 4.20
5549 5956 4.803426 GAGTGAGCACCGCCCTCG 62.803 72.222 0.00 0.00 31.98 4.63
5550 5957 4.459089 GGAGTGAGCACCGCCCTC 62.459 72.222 0.00 0.00 0.00 4.30
5553 5960 4.803426 CTCGGAGTGAGCACCGCC 62.803 72.222 0.00 0.00 46.15 6.13
5554 5961 4.803426 CCTCGGAGTGAGCACCGC 62.803 72.222 4.02 0.00 46.15 5.68
5556 5963 1.816863 TTGACCTCGGAGTGAGCACC 61.817 60.000 4.02 0.00 43.82 5.01
5557 5964 0.667792 GTTGACCTCGGAGTGAGCAC 60.668 60.000 4.02 0.00 43.82 4.40
5558 5965 1.112916 TGTTGACCTCGGAGTGAGCA 61.113 55.000 4.02 0.00 43.82 4.26
5559 5966 0.033504 TTGTTGACCTCGGAGTGAGC 59.966 55.000 4.02 0.00 43.82 4.26
5560 5967 1.341531 ACTTGTTGACCTCGGAGTGAG 59.658 52.381 4.02 0.00 44.83 3.51
5561 5968 1.068588 CACTTGTTGACCTCGGAGTGA 59.931 52.381 4.02 0.00 37.32 3.41
5562 5969 1.502231 CACTTGTTGACCTCGGAGTG 58.498 55.000 4.02 0.00 0.00 3.51
5563 5970 0.393077 CCACTTGTTGACCTCGGAGT 59.607 55.000 4.02 0.00 0.00 3.85
5564 5971 0.951040 GCCACTTGTTGACCTCGGAG 60.951 60.000 0.00 0.00 0.00 4.63
5565 5972 1.070786 GCCACTTGTTGACCTCGGA 59.929 57.895 0.00 0.00 0.00 4.55
5566 5973 0.320374 TAGCCACTTGTTGACCTCGG 59.680 55.000 0.00 0.00 0.00 4.63
5567 5974 1.673033 CCTAGCCACTTGTTGACCTCG 60.673 57.143 0.00 0.00 0.00 4.63
5568 5975 1.946283 GCCTAGCCACTTGTTGACCTC 60.946 57.143 0.00 0.00 0.00 3.85
5569 5976 0.036875 GCCTAGCCACTTGTTGACCT 59.963 55.000 0.00 0.00 0.00 3.85
5570 5977 0.250727 TGCCTAGCCACTTGTTGACC 60.251 55.000 0.00 0.00 0.00 4.02
5571 5978 1.160137 CTGCCTAGCCACTTGTTGAC 58.840 55.000 0.00 0.00 0.00 3.18
5572 5979 0.606401 GCTGCCTAGCCACTTGTTGA 60.606 55.000 0.00 0.00 44.33 3.18
5573 5980 1.878775 GCTGCCTAGCCACTTGTTG 59.121 57.895 0.00 0.00 44.33 3.33
5574 5981 4.404691 GCTGCCTAGCCACTTGTT 57.595 55.556 0.00 0.00 44.33 2.83
5582 5989 1.135523 GAAACTTGCGCTGCCTAGC 59.864 57.895 9.73 0.00 46.62 3.42
5583 5990 1.648467 GGGAAACTTGCGCTGCCTAG 61.648 60.000 9.73 0.63 0.00 3.02
5584 5991 1.674322 GGGAAACTTGCGCTGCCTA 60.674 57.895 9.73 0.00 0.00 3.93
5585 5992 2.985847 GGGAAACTTGCGCTGCCT 60.986 61.111 9.73 0.00 0.00 4.75
5586 5993 4.404654 CGGGAAACTTGCGCTGCC 62.405 66.667 9.73 0.54 0.00 4.85
5587 5994 3.353836 TCGGGAAACTTGCGCTGC 61.354 61.111 9.73 0.00 0.00 5.25
5588 5995 2.556287 GTCGGGAAACTTGCGCTG 59.444 61.111 9.73 3.92 0.00 5.18
5589 5996 2.668550 GGTCGGGAAACTTGCGCT 60.669 61.111 9.73 0.00 0.00 5.92
5590 5997 3.733960 GGGTCGGGAAACTTGCGC 61.734 66.667 0.00 0.00 0.00 6.09
5591 5998 2.281208 TGGGTCGGGAAACTTGCG 60.281 61.111 0.00 0.00 0.00 4.85
5592 5999 2.626780 GCTGGGTCGGGAAACTTGC 61.627 63.158 0.00 0.00 0.00 4.01
5593 6000 2.325082 CGCTGGGTCGGGAAACTTG 61.325 63.158 0.00 0.00 0.00 3.16
5594 6001 2.032071 CGCTGGGTCGGGAAACTT 59.968 61.111 0.00 0.00 0.00 2.66
5595 6002 4.699522 GCGCTGGGTCGGGAAACT 62.700 66.667 0.00 0.00 0.00 2.66
5596 6003 4.699522 AGCGCTGGGTCGGGAAAC 62.700 66.667 10.39 0.00 0.00 2.78
5597 6004 3.948719 AAGCGCTGGGTCGGGAAA 61.949 61.111 12.58 0.00 0.00 3.13
5598 6005 4.697756 CAAGCGCTGGGTCGGGAA 62.698 66.667 12.58 0.00 0.00 3.97
5601 6008 4.379243 AGACAAGCGCTGGGTCGG 62.379 66.667 26.96 11.00 36.68 4.79
5602 6009 3.114616 CAGACAAGCGCTGGGTCG 61.115 66.667 26.96 20.46 36.68 4.79
5611 6018 3.842925 TTCGGTGGCCCAGACAAGC 62.843 63.158 0.00 0.00 0.00 4.01
5612 6019 1.672356 CTTCGGTGGCCCAGACAAG 60.672 63.158 0.00 0.00 0.00 3.16
5613 6020 2.429930 CTTCGGTGGCCCAGACAA 59.570 61.111 0.00 0.00 0.00 3.18
5614 6021 4.329545 GCTTCGGTGGCCCAGACA 62.330 66.667 0.00 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.