Multiple sequence alignment - TraesCS1D01G414500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G414500 chr1D 100.000 2571 0 0 1 2571 474360828 474363398 0.000000e+00 4748.0
1 TraesCS1D01G414500 chr1D 82.058 379 21 18 242 597 474422985 474422631 1.950000e-71 279.0
2 TraesCS1D01G414500 chr1D 91.837 98 5 3 1994 2089 474362784 474362880 1.600000e-27 134.0
3 TraesCS1D01G414500 chr1D 91.837 98 5 3 1957 2053 474362821 474362916 1.600000e-27 134.0
4 TraesCS1D01G414500 chr1D 98.571 70 1 0 1823 1892 474362521 474362590 9.660000e-25 124.0
5 TraesCS1D01G414500 chr1D 98.571 70 1 0 1694 1763 474362650 474362719 9.660000e-25 124.0
6 TraesCS1D01G414500 chr1D 100.000 30 0 0 1799 1828 474362556 474362585 3.570000e-04 56.5
7 TraesCS1D01G414500 chr1D 100.000 30 0 0 1729 1758 474362626 474362655 3.570000e-04 56.5
8 TraesCS1D01G414500 chr1D 100.000 30 0 0 1858 1887 474362626 474362655 3.570000e-04 56.5
9 TraesCS1D01G414500 chr1D 100.000 30 0 0 1799 1828 474362685 474362714 3.570000e-04 56.5
10 TraesCS1D01G414500 chr4D 97.580 1157 28 0 672 1828 81317971 81319127 0.000000e+00 1982.0
11 TraesCS1D01G414500 chr4D 95.918 784 17 11 1799 2569 81319028 81319809 0.000000e+00 1256.0
12 TraesCS1D01G414500 chr4D 91.837 98 5 3 1957 2053 81319234 81319329 1.600000e-27 134.0
13 TraesCS1D01G414500 chr4D 95.122 82 3 1 1994 2074 81319197 81319278 7.470000e-26 128.0
14 TraesCS1D01G414500 chr4D 98.571 70 1 0 1823 1892 81318993 81319062 9.660000e-25 124.0
15 TraesCS1D01G414500 chr4D 97.436 39 1 0 1725 1763 81319094 81319132 1.650000e-07 67.6
16 TraesCS1D01G414500 chr2B 90.670 836 52 9 672 1492 589532224 589533048 0.000000e+00 1088.0
17 TraesCS1D01G414500 chr2B 83.010 824 104 24 672 1491 717883115 717883906 0.000000e+00 713.0
18 TraesCS1D01G414500 chr5A 89.927 824 75 6 672 1491 650781847 650781028 0.000000e+00 1055.0
19 TraesCS1D01G414500 chr5A 83.073 449 54 14 1891 2337 650780677 650780249 3.100000e-104 388.0
20 TraesCS1D01G414500 chr5A 89.003 291 25 3 1492 1781 650780991 650780707 1.130000e-93 353.0
21 TraesCS1D01G414500 chr5A 93.617 235 15 0 2334 2568 650780222 650779988 4.070000e-93 351.0
22 TraesCS1D01G414500 chr5A 84.000 75 12 0 1957 2031 650780574 650780500 3.550000e-09 73.1
23 TraesCS1D01G414500 chr6D 85.801 824 90 15 672 1491 55879442 55878642 0.000000e+00 848.0
24 TraesCS1D01G414500 chr6D 88.718 390 39 2 2166 2551 55878131 55877743 2.990000e-129 472.0
25 TraesCS1D01G414500 chr6D 90.857 350 31 1 2202 2551 55874757 55875105 3.870000e-128 468.0
26 TraesCS1D01G414500 chr6D 82.132 319 30 16 1496 1789 55878601 55878285 5.490000e-62 248.0
27 TraesCS1D01G414500 chr3D 85.697 825 91 15 668 1488 599328957 599329758 0.000000e+00 845.0
28 TraesCS1D01G414500 chr3D 82.888 824 96 28 672 1491 105899732 105898950 0.000000e+00 699.0
29 TraesCS1D01G414500 chr3D 84.202 595 74 11 1965 2551 599330195 599330777 6.210000e-156 560.0
30 TraesCS1D01G414500 chr3D 88.520 392 38 2 2166 2551 406139550 406139940 3.870000e-128 468.0
31 TraesCS1D01G414500 chr3D 81.677 322 32 16 1493 1789 599329799 599330118 2.560000e-60 243.0
32 TraesCS1D01G414500 chr3D 81.056 322 34 16 1493 1789 406139029 406139348 5.530000e-57 231.0
33 TraesCS1D01G414500 chr7D 85.680 824 84 16 672 1488 549946252 549947048 0.000000e+00 837.0
34 TraesCS1D01G414500 chr7D 89.231 390 37 2 2166 2551 549947610 549947998 1.380000e-132 483.0
35 TraesCS1D01G414500 chr7D 82.298 322 30 16 1493 1789 549947089 549947408 1.180000e-63 254.0
36 TraesCS1D01G414500 chr3A 82.767 824 109 23 671 1491 23147972 23148765 0.000000e+00 704.0
37 TraesCS1D01G414500 chr3A 82.969 229 22 3 2334 2562 23149689 23149900 9.390000e-45 191.0
38 TraesCS1D01G414500 chr3A 86.207 116 10 4 1494 1608 23148807 23148917 1.250000e-23 121.0
39 TraesCS1D01G414500 chr3A 81.600 125 19 1 1658 1782 23149041 23149161 1.630000e-17 100.0
40 TraesCS1D01G414500 chr3A 90.909 55 5 0 1838 1892 23149088 23149142 9.870000e-10 75.0
41 TraesCS1D01G414500 chr1B 82.403 824 109 21 672 1491 448411159 448411950 0.000000e+00 686.0
42 TraesCS1D01G414500 chr7B 92.348 379 8 4 2191 2569 700195671 700195314 1.050000e-143 520.0
43 TraesCS1D01G414500 chr7B 96.407 167 4 2 1623 1789 700196043 700195879 9.060000e-70 274.0
44 TraesCS1D01G414500 chr7B 94.286 140 7 1 1891 2029 700195857 700195718 2.000000e-51 213.0
45 TraesCS1D01G414500 chr7B 89.320 103 9 2 1493 1594 40012172 40012273 7.470000e-26 128.0
46 TraesCS1D01G414500 chr7B 98.361 61 1 0 1994 2054 700195791 700195731 9.730000e-20 108.0
47 TraesCS1D01G414500 chr4B 90.514 253 3 3 2317 2569 449520588 449520819 5.340000e-82 315.0
48 TraesCS1D01G414500 chr1A 79.155 355 27 23 296 624 568735272 568734939 4.340000e-48 202.0
49 TraesCS1D01G414500 chr1A 90.667 75 7 0 56 130 568759494 568759420 1.630000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G414500 chr1D 474360828 474363398 2570 False 610.000000 4748 97.868444 1 2571 9 chr1D.!!$F1 2570
1 TraesCS1D01G414500 chr4D 81317971 81319809 1838 False 615.266667 1982 96.077333 672 2569 6 chr4D.!!$F1 1897
2 TraesCS1D01G414500 chr2B 589532224 589533048 824 False 1088.000000 1088 90.670000 672 1492 1 chr2B.!!$F1 820
3 TraesCS1D01G414500 chr2B 717883115 717883906 791 False 713.000000 713 83.010000 672 1491 1 chr2B.!!$F2 819
4 TraesCS1D01G414500 chr5A 650779988 650781847 1859 True 444.020000 1055 87.924000 672 2568 5 chr5A.!!$R1 1896
5 TraesCS1D01G414500 chr6D 55877743 55879442 1699 True 522.666667 848 85.550333 672 2551 3 chr6D.!!$R1 1879
6 TraesCS1D01G414500 chr3D 105898950 105899732 782 True 699.000000 699 82.888000 672 1491 1 chr3D.!!$R1 819
7 TraesCS1D01G414500 chr3D 599328957 599330777 1820 False 549.333333 845 83.858667 668 2551 3 chr3D.!!$F2 1883
8 TraesCS1D01G414500 chr3D 406139029 406139940 911 False 349.500000 468 84.788000 1493 2551 2 chr3D.!!$F1 1058
9 TraesCS1D01G414500 chr7D 549946252 549947998 1746 False 524.666667 837 85.736333 672 2551 3 chr7D.!!$F1 1879
10 TraesCS1D01G414500 chr3A 23147972 23149900 1928 False 238.200000 704 84.890400 671 2562 5 chr3A.!!$F1 1891
11 TraesCS1D01G414500 chr1B 448411159 448411950 791 False 686.000000 686 82.403000 672 1491 1 chr1B.!!$F1 819
12 TraesCS1D01G414500 chr7B 700195314 700196043 729 True 278.750000 520 95.350500 1623 2569 4 chr7B.!!$R1 946

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
162 163 0.032678 GGCATGATCATCGTCTCCGT 59.967 55.0 4.86 0.0 35.01 4.69 F
189 190 0.034670 AAACTGATGGGAGCAGGAGC 60.035 55.0 0.00 0.0 37.69 4.70 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1443 1475 1.536496 CCACACACAATGCACCAACAG 60.536 52.381 0.0 0.0 0.00 3.16 R
2061 2380 2.036346 AGTTGCTGACAAAAATGAGCCC 59.964 45.455 0.0 0.0 37.58 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 6.474364 GGTTTTGTTCAGTTATTGTTGTTGC 58.526 36.000 0.00 0.00 0.00 4.17
25 26 6.091441 GGTTTTGTTCAGTTATTGTTGTTGCA 59.909 34.615 0.00 0.00 0.00 4.08
26 27 6.639671 TTTGTTCAGTTATTGTTGTTGCAC 57.360 33.333 0.00 0.00 0.00 4.57
27 28 4.677584 TGTTCAGTTATTGTTGTTGCACC 58.322 39.130 0.00 0.00 0.00 5.01
28 29 4.400884 TGTTCAGTTATTGTTGTTGCACCT 59.599 37.500 0.00 0.00 0.00 4.00
29 30 5.105554 TGTTCAGTTATTGTTGTTGCACCTT 60.106 36.000 0.00 0.00 0.00 3.50
30 31 4.930963 TCAGTTATTGTTGTTGCACCTTG 58.069 39.130 0.00 0.00 0.00 3.61
31 32 4.642437 TCAGTTATTGTTGTTGCACCTTGA 59.358 37.500 0.00 0.00 0.00 3.02
32 33 5.126222 TCAGTTATTGTTGTTGCACCTTGAA 59.874 36.000 0.00 0.00 0.00 2.69
33 34 5.231991 CAGTTATTGTTGTTGCACCTTGAAC 59.768 40.000 0.00 0.00 0.00 3.18
34 35 2.270275 TTGTTGTTGCACCTTGAACG 57.730 45.000 0.00 0.00 0.00 3.95
35 36 1.454201 TGTTGTTGCACCTTGAACGA 58.546 45.000 0.00 0.00 0.00 3.85
36 37 1.813178 TGTTGTTGCACCTTGAACGAA 59.187 42.857 0.00 0.00 0.00 3.85
37 38 2.159448 TGTTGTTGCACCTTGAACGAAG 60.159 45.455 0.00 0.00 0.00 3.79
47 48 3.855689 CTTGAACGAAGGAATGCCATT 57.144 42.857 0.00 0.00 36.29 3.16
48 49 4.963276 CTTGAACGAAGGAATGCCATTA 57.037 40.909 0.00 0.00 36.29 1.90
49 50 5.309323 CTTGAACGAAGGAATGCCATTAA 57.691 39.130 0.00 0.00 36.29 1.40
50 51 5.708948 CTTGAACGAAGGAATGCCATTAAA 58.291 37.500 0.00 0.00 36.29 1.52
51 52 5.309323 TGAACGAAGGAATGCCATTAAAG 57.691 39.130 0.00 0.00 36.29 1.85
52 53 3.782889 ACGAAGGAATGCCATTAAAGC 57.217 42.857 0.00 0.00 36.29 3.51
53 54 2.427095 ACGAAGGAATGCCATTAAAGCC 59.573 45.455 0.00 0.00 36.29 4.35
54 55 2.541588 CGAAGGAATGCCATTAAAGCCG 60.542 50.000 0.00 0.00 36.29 5.52
55 56 2.435372 AGGAATGCCATTAAAGCCGA 57.565 45.000 0.00 0.00 36.29 5.54
56 57 2.949447 AGGAATGCCATTAAAGCCGAT 58.051 42.857 0.00 0.00 36.29 4.18
57 58 2.624838 AGGAATGCCATTAAAGCCGATG 59.375 45.455 0.00 0.00 36.29 3.84
58 59 2.622942 GGAATGCCATTAAAGCCGATGA 59.377 45.455 0.00 0.00 0.00 2.92
59 60 3.068024 GGAATGCCATTAAAGCCGATGAA 59.932 43.478 0.00 0.00 0.00 2.57
60 61 4.441356 GGAATGCCATTAAAGCCGATGAAA 60.441 41.667 0.00 0.00 0.00 2.69
61 62 3.502191 TGCCATTAAAGCCGATGAAAC 57.498 42.857 0.00 0.00 0.00 2.78
62 63 2.822561 TGCCATTAAAGCCGATGAAACA 59.177 40.909 0.00 0.00 0.00 2.83
63 64 3.446873 TGCCATTAAAGCCGATGAAACAT 59.553 39.130 0.00 0.00 0.00 2.71
64 65 4.081752 TGCCATTAAAGCCGATGAAACATT 60.082 37.500 0.00 0.00 0.00 2.71
65 66 4.504097 GCCATTAAAGCCGATGAAACATTC 59.496 41.667 0.00 0.00 0.00 2.67
66 67 4.734854 CCATTAAAGCCGATGAAACATTCG 59.265 41.667 0.00 0.00 35.19 3.34
67 68 5.448496 CCATTAAAGCCGATGAAACATTCGA 60.448 40.000 0.00 0.00 37.55 3.71
68 69 5.811399 TTAAAGCCGATGAAACATTCGAT 57.189 34.783 0.00 0.00 37.55 3.59
69 70 6.912203 TTAAAGCCGATGAAACATTCGATA 57.088 33.333 0.00 0.00 37.55 2.92
70 71 5.409643 AAAGCCGATGAAACATTCGATAG 57.590 39.130 0.00 0.00 37.55 2.08
71 72 2.802816 AGCCGATGAAACATTCGATAGC 59.197 45.455 0.00 0.00 37.55 2.97
72 73 2.096218 GCCGATGAAACATTCGATAGCC 60.096 50.000 0.00 0.00 37.55 3.93
73 74 2.155732 CCGATGAAACATTCGATAGCCG 59.844 50.000 0.00 0.00 37.55 5.52
74 75 3.049912 CGATGAAACATTCGATAGCCGA 58.950 45.455 0.00 0.00 46.94 5.54
81 82 3.592814 TCGATAGCCGACCCGCTG 61.593 66.667 0.00 0.00 43.23 5.18
83 84 3.917760 GATAGCCGACCCGCTGCT 61.918 66.667 0.00 0.00 40.08 4.24
84 85 3.850095 GATAGCCGACCCGCTGCTC 62.850 68.421 0.00 0.00 40.08 4.26
90 91 4.373116 GACCCGCTGCTCCGTGAA 62.373 66.667 0.00 0.00 0.00 3.18
91 92 4.379243 ACCCGCTGCTCCGTGAAG 62.379 66.667 0.00 0.00 0.00 3.02
92 93 4.379243 CCCGCTGCTCCGTGAAGT 62.379 66.667 0.00 0.00 0.00 3.01
93 94 3.114616 CCGCTGCTCCGTGAAGTG 61.115 66.667 0.00 0.00 0.00 3.16
94 95 3.114616 CGCTGCTCCGTGAAGTGG 61.115 66.667 0.00 0.00 0.00 4.00
95 96 2.343758 GCTGCTCCGTGAAGTGGA 59.656 61.111 0.00 0.00 0.00 4.02
96 97 2.029844 GCTGCTCCGTGAAGTGGAC 61.030 63.158 0.00 0.00 0.00 4.02
97 98 1.367471 CTGCTCCGTGAAGTGGACA 59.633 57.895 0.00 0.00 0.00 4.02
98 99 0.946221 CTGCTCCGTGAAGTGGACAC 60.946 60.000 0.00 0.00 35.26 3.67
115 116 3.168773 ACGAGAGTGAGAGAGAGCC 57.831 57.895 0.00 0.00 46.97 4.70
116 117 0.742990 ACGAGAGTGAGAGAGAGCCG 60.743 60.000 0.00 0.00 46.97 5.52
117 118 1.436195 CGAGAGTGAGAGAGAGCCGG 61.436 65.000 0.00 0.00 0.00 6.13
118 119 1.724582 GAGAGTGAGAGAGAGCCGGC 61.725 65.000 21.89 21.89 0.00 6.13
119 120 3.119709 GAGTGAGAGAGAGCCGGCG 62.120 68.421 23.20 0.00 0.00 6.46
120 121 3.444805 GTGAGAGAGAGCCGGCGT 61.445 66.667 23.20 13.28 0.00 5.68
121 122 3.443925 TGAGAGAGAGCCGGCGTG 61.444 66.667 23.20 0.00 0.00 5.34
122 123 3.134792 GAGAGAGAGCCGGCGTGA 61.135 66.667 23.20 0.00 0.00 4.35
123 124 3.404141 GAGAGAGAGCCGGCGTGAC 62.404 68.421 23.20 14.02 0.00 3.67
124 125 4.838486 GAGAGAGCCGGCGTGACG 62.838 72.222 23.20 0.00 0.00 4.35
126 127 4.719369 GAGAGCCGGCGTGACGTT 62.719 66.667 23.20 0.00 0.00 3.99
131 132 3.403057 CCGGCGTGACGTTGACAG 61.403 66.667 6.91 0.00 0.00 3.51
132 133 2.354188 CGGCGTGACGTTGACAGA 60.354 61.111 6.91 0.00 0.00 3.41
133 134 1.947146 CGGCGTGACGTTGACAGAA 60.947 57.895 6.91 0.00 0.00 3.02
134 135 1.282248 CGGCGTGACGTTGACAGAAT 61.282 55.000 6.91 0.00 0.00 2.40
135 136 0.163788 GGCGTGACGTTGACAGAATG 59.836 55.000 6.91 0.00 46.00 2.67
136 137 0.163788 GCGTGACGTTGACAGAATGG 59.836 55.000 6.91 0.00 43.62 3.16
145 146 2.362120 ACAGAATGGCAGGCAGGC 60.362 61.111 1.89 0.00 43.62 4.85
152 153 2.124024 GGCAGGCAGGCATGATCA 60.124 61.111 10.42 0.00 43.51 2.92
153 154 1.530891 GGCAGGCAGGCATGATCAT 60.531 57.895 10.42 1.18 43.51 2.45
154 155 1.524863 GGCAGGCAGGCATGATCATC 61.525 60.000 10.42 0.97 43.51 2.92
155 156 1.853114 GCAGGCAGGCATGATCATCG 61.853 60.000 10.42 3.09 0.00 3.84
156 157 0.534427 CAGGCAGGCATGATCATCGT 60.534 55.000 4.86 0.16 0.00 3.73
157 158 0.250209 AGGCAGGCATGATCATCGTC 60.250 55.000 4.86 3.49 0.00 4.20
158 159 0.250209 GGCAGGCATGATCATCGTCT 60.250 55.000 4.86 5.86 0.00 4.18
159 160 1.146637 GCAGGCATGATCATCGTCTC 58.853 55.000 4.86 0.65 0.00 3.36
160 161 1.793258 CAGGCATGATCATCGTCTCC 58.207 55.000 4.86 2.63 0.00 3.71
161 162 0.316522 AGGCATGATCATCGTCTCCG 59.683 55.000 4.86 0.00 0.00 4.63
162 163 0.032678 GGCATGATCATCGTCTCCGT 59.967 55.000 4.86 0.00 35.01 4.69
163 164 1.135046 GCATGATCATCGTCTCCGTG 58.865 55.000 4.86 0.00 35.01 4.94
164 165 1.135046 CATGATCATCGTCTCCGTGC 58.865 55.000 4.86 0.00 35.01 5.34
165 166 0.032678 ATGATCATCGTCTCCGTGCC 59.967 55.000 1.18 0.00 35.01 5.01
166 167 1.658717 GATCATCGTCTCCGTGCCG 60.659 63.158 0.00 0.00 35.01 5.69
167 168 2.337749 GATCATCGTCTCCGTGCCGT 62.338 60.000 0.00 0.00 35.01 5.68
168 169 2.613739 ATCATCGTCTCCGTGCCGTG 62.614 60.000 0.00 0.00 35.01 4.94
169 170 3.060000 ATCGTCTCCGTGCCGTGA 61.060 61.111 0.00 0.00 35.01 4.35
170 171 2.632544 ATCGTCTCCGTGCCGTGAA 61.633 57.895 0.00 0.00 35.01 3.18
171 172 2.149803 ATCGTCTCCGTGCCGTGAAA 62.150 55.000 0.00 0.00 35.01 2.69
172 173 1.952133 CGTCTCCGTGCCGTGAAAA 60.952 57.895 0.00 0.00 0.00 2.29
173 174 1.568025 GTCTCCGTGCCGTGAAAAC 59.432 57.895 0.00 0.00 0.00 2.43
174 175 0.878961 GTCTCCGTGCCGTGAAAACT 60.879 55.000 0.00 0.00 0.00 2.66
175 176 0.878523 TCTCCGTGCCGTGAAAACTG 60.879 55.000 0.00 0.00 0.00 3.16
176 177 0.878523 CTCCGTGCCGTGAAAACTGA 60.879 55.000 0.00 0.00 0.00 3.41
177 178 0.250124 TCCGTGCCGTGAAAACTGAT 60.250 50.000 0.00 0.00 0.00 2.90
178 179 0.110238 CCGTGCCGTGAAAACTGATG 60.110 55.000 0.00 0.00 0.00 3.07
179 180 0.110238 CGTGCCGTGAAAACTGATGG 60.110 55.000 0.00 0.00 0.00 3.51
180 181 0.240945 GTGCCGTGAAAACTGATGGG 59.759 55.000 0.00 0.00 0.00 4.00
181 182 0.109532 TGCCGTGAAAACTGATGGGA 59.890 50.000 0.00 0.00 0.00 4.37
182 183 0.804989 GCCGTGAAAACTGATGGGAG 59.195 55.000 0.00 0.00 0.00 4.30
183 184 0.804989 CCGTGAAAACTGATGGGAGC 59.195 55.000 0.00 0.00 0.00 4.70
184 185 1.522668 CGTGAAAACTGATGGGAGCA 58.477 50.000 0.00 0.00 0.00 4.26
185 186 1.466167 CGTGAAAACTGATGGGAGCAG 59.534 52.381 0.00 0.00 39.26 4.24
186 187 1.815003 GTGAAAACTGATGGGAGCAGG 59.185 52.381 0.00 0.00 37.69 4.85
187 188 1.704628 TGAAAACTGATGGGAGCAGGA 59.295 47.619 0.00 0.00 37.69 3.86
188 189 2.290514 TGAAAACTGATGGGAGCAGGAG 60.291 50.000 0.00 0.00 37.69 3.69
189 190 0.034670 AAACTGATGGGAGCAGGAGC 60.035 55.000 0.00 0.00 37.69 4.70
200 201 3.329300 GCAGGAGCTTGAGACCAAA 57.671 52.632 0.00 0.00 37.91 3.28
201 202 1.609208 GCAGGAGCTTGAGACCAAAA 58.391 50.000 0.00 0.00 37.91 2.44
202 203 1.268079 GCAGGAGCTTGAGACCAAAAC 59.732 52.381 0.00 0.00 37.91 2.43
203 204 2.575532 CAGGAGCTTGAGACCAAAACA 58.424 47.619 0.00 0.00 0.00 2.83
204 205 2.551459 CAGGAGCTTGAGACCAAAACAG 59.449 50.000 0.00 0.00 0.00 3.16
205 206 1.268079 GGAGCTTGAGACCAAAACAGC 59.732 52.381 0.00 0.00 0.00 4.40
206 207 1.268079 GAGCTTGAGACCAAAACAGCC 59.732 52.381 0.00 0.00 0.00 4.85
207 208 0.315251 GCTTGAGACCAAAACAGCCC 59.685 55.000 0.00 0.00 0.00 5.19
208 209 0.593128 CTTGAGACCAAAACAGCCCG 59.407 55.000 0.00 0.00 0.00 6.13
209 210 0.106918 TTGAGACCAAAACAGCCCGT 60.107 50.000 0.00 0.00 0.00 5.28
210 211 0.817634 TGAGACCAAAACAGCCCGTG 60.818 55.000 0.00 0.00 0.00 4.94
211 212 0.818040 GAGACCAAAACAGCCCGTGT 60.818 55.000 0.00 0.00 43.24 4.49
212 213 1.101049 AGACCAAAACAGCCCGTGTG 61.101 55.000 0.00 0.00 40.26 3.82
213 214 1.077357 ACCAAAACAGCCCGTGTGA 60.077 52.632 0.00 0.00 40.26 3.58
214 215 0.467290 ACCAAAACAGCCCGTGTGAT 60.467 50.000 0.00 0.00 40.26 3.06
215 216 0.039256 CCAAAACAGCCCGTGTGATG 60.039 55.000 0.00 0.00 40.26 3.07
216 217 0.950836 CAAAACAGCCCGTGTGATGA 59.049 50.000 0.00 0.00 40.26 2.92
217 218 1.336440 CAAAACAGCCCGTGTGATGAA 59.664 47.619 0.00 0.00 40.26 2.57
218 219 1.686355 AAACAGCCCGTGTGATGAAA 58.314 45.000 0.00 0.00 40.26 2.69
219 220 0.951558 AACAGCCCGTGTGATGAAAC 59.048 50.000 0.00 0.00 40.26 2.78
220 221 0.889186 ACAGCCCGTGTGATGAAACC 60.889 55.000 0.00 0.00 38.28 3.27
221 222 1.671054 AGCCCGTGTGATGAAACCG 60.671 57.895 0.00 0.00 0.00 4.44
222 223 2.867472 CCCGTGTGATGAAACCGC 59.133 61.111 0.00 0.00 0.00 5.68
223 224 1.963855 CCCGTGTGATGAAACCGCA 60.964 57.895 0.00 0.00 0.00 5.69
224 225 1.511318 CCCGTGTGATGAAACCGCAA 61.511 55.000 0.00 0.00 0.00 4.85
225 226 0.521291 CCGTGTGATGAAACCGCAAT 59.479 50.000 0.00 0.00 0.00 3.56
226 227 1.605500 CGTGTGATGAAACCGCAATG 58.394 50.000 0.00 0.00 0.00 2.82
227 228 1.196581 CGTGTGATGAAACCGCAATGA 59.803 47.619 0.00 0.00 0.00 2.57
228 229 2.159531 CGTGTGATGAAACCGCAATGAT 60.160 45.455 0.00 0.00 0.00 2.45
229 230 3.429085 GTGTGATGAAACCGCAATGATC 58.571 45.455 0.00 0.00 0.00 2.92
230 231 3.080319 TGTGATGAAACCGCAATGATCA 58.920 40.909 0.00 0.00 0.00 2.92
231 232 3.695556 TGTGATGAAACCGCAATGATCAT 59.304 39.130 1.18 1.18 0.00 2.45
232 233 4.201940 TGTGATGAAACCGCAATGATCATC 60.202 41.667 9.06 7.03 34.73 2.92
233 234 4.036027 GTGATGAAACCGCAATGATCATCT 59.964 41.667 9.06 0.00 35.08 2.90
234 235 4.641541 TGATGAAACCGCAATGATCATCTT 59.358 37.500 9.06 0.00 35.08 2.40
235 236 4.359971 TGAAACCGCAATGATCATCTTG 57.640 40.909 9.06 6.67 0.00 3.02
236 237 3.129113 TGAAACCGCAATGATCATCTTGG 59.871 43.478 9.06 12.80 0.00 3.61
237 238 2.425143 ACCGCAATGATCATCTTGGT 57.575 45.000 9.06 13.43 0.00 3.67
238 239 2.292267 ACCGCAATGATCATCTTGGTC 58.708 47.619 9.06 0.00 0.00 4.02
239 240 1.262417 CCGCAATGATCATCTTGGTCG 59.738 52.381 9.06 5.53 27.66 4.79
240 241 1.935873 CGCAATGATCATCTTGGTCGT 59.064 47.619 9.06 0.00 27.66 4.34
241 242 2.033407 CGCAATGATCATCTTGGTCGTC 60.033 50.000 9.06 0.00 27.66 4.20
242 243 3.201290 GCAATGATCATCTTGGTCGTCT 58.799 45.455 9.06 0.00 27.66 4.18
243 244 3.624861 GCAATGATCATCTTGGTCGTCTT 59.375 43.478 9.06 0.00 27.66 3.01
244 245 4.495349 GCAATGATCATCTTGGTCGTCTTG 60.495 45.833 9.06 0.83 27.66 3.02
245 246 3.251479 TGATCATCTTGGTCGTCTTGG 57.749 47.619 0.00 0.00 27.66 3.61
246 247 2.567169 TGATCATCTTGGTCGTCTTGGT 59.433 45.455 0.00 0.00 27.66 3.67
247 248 2.743636 TCATCTTGGTCGTCTTGGTC 57.256 50.000 0.00 0.00 0.00 4.02
248 249 1.067846 TCATCTTGGTCGTCTTGGTCG 60.068 52.381 0.00 0.00 0.00 4.79
249 250 0.389948 ATCTTGGTCGTCTTGGTCGC 60.390 55.000 0.00 0.00 0.00 5.19
250 251 1.006102 CTTGGTCGTCTTGGTCGCT 60.006 57.895 0.00 0.00 0.00 4.93
251 252 1.006571 TTGGTCGTCTTGGTCGCTC 60.007 57.895 0.00 0.00 0.00 5.03
252 253 1.740332 TTGGTCGTCTTGGTCGCTCA 61.740 55.000 0.00 0.00 0.00 4.26
253 254 1.444553 GGTCGTCTTGGTCGCTCAG 60.445 63.158 0.00 0.00 0.00 3.35
254 255 2.089349 GTCGTCTTGGTCGCTCAGC 61.089 63.158 0.00 0.00 0.00 4.26
255 256 2.259818 CGTCTTGGTCGCTCAGCT 59.740 61.111 0.00 0.00 0.00 4.24
256 257 1.803519 CGTCTTGGTCGCTCAGCTC 60.804 63.158 0.00 0.00 0.00 4.09
257 258 1.446966 GTCTTGGTCGCTCAGCTCC 60.447 63.158 0.00 0.00 0.00 4.70
258 259 1.607756 TCTTGGTCGCTCAGCTCCT 60.608 57.895 8.81 0.00 0.00 3.69
259 260 1.447489 CTTGGTCGCTCAGCTCCTG 60.447 63.158 8.81 0.00 0.00 3.86
260 261 1.881903 CTTGGTCGCTCAGCTCCTGA 61.882 60.000 8.81 0.00 38.25 3.86
261 262 1.260538 TTGGTCGCTCAGCTCCTGAT 61.261 55.000 8.81 0.00 39.92 2.90
262 263 1.260538 TGGTCGCTCAGCTCCTGATT 61.261 55.000 8.81 0.00 39.92 2.57
263 264 0.529555 GGTCGCTCAGCTCCTGATTC 60.530 60.000 0.00 0.00 39.92 2.52
264 265 0.459489 GTCGCTCAGCTCCTGATTCT 59.541 55.000 0.00 0.00 39.92 2.40
265 266 0.459078 TCGCTCAGCTCCTGATTCTG 59.541 55.000 0.00 0.00 39.92 3.02
266 267 0.459078 CGCTCAGCTCCTGATTCTGA 59.541 55.000 0.00 0.00 39.92 3.27
267 268 1.068895 CGCTCAGCTCCTGATTCTGAT 59.931 52.381 0.00 0.00 39.92 2.90
268 269 2.483363 CGCTCAGCTCCTGATTCTGATT 60.483 50.000 0.00 0.00 39.92 2.57
269 270 3.132925 GCTCAGCTCCTGATTCTGATTC 58.867 50.000 0.00 0.00 39.92 2.52
270 271 3.382855 CTCAGCTCCTGATTCTGATTCG 58.617 50.000 0.00 0.00 39.92 3.34
271 272 2.102084 TCAGCTCCTGATTCTGATTCGG 59.898 50.000 2.16 2.16 35.39 4.30
272 273 2.114616 AGCTCCTGATTCTGATTCGGT 58.885 47.619 7.41 0.00 0.00 4.69
273 274 2.158986 AGCTCCTGATTCTGATTCGGTG 60.159 50.000 7.41 7.45 0.00 4.94
274 275 2.419297 GCTCCTGATTCTGATTCGGTGT 60.419 50.000 7.41 0.00 0.00 4.16
275 276 3.452474 CTCCTGATTCTGATTCGGTGTC 58.548 50.000 7.41 0.00 0.00 3.67
276 277 2.159240 TCCTGATTCTGATTCGGTGTCG 60.159 50.000 7.41 0.00 37.82 4.35
277 278 2.417379 CCTGATTCTGATTCGGTGTCGT 60.417 50.000 7.41 0.00 37.69 4.34
278 279 2.600420 CTGATTCTGATTCGGTGTCGTG 59.400 50.000 1.17 0.00 37.69 4.35
279 280 2.230266 TGATTCTGATTCGGTGTCGTGA 59.770 45.455 0.00 0.00 37.69 4.35
280 281 2.060326 TTCTGATTCGGTGTCGTGAC 57.940 50.000 0.00 0.00 37.69 3.67
281 282 1.244816 TCTGATTCGGTGTCGTGACT 58.755 50.000 1.23 0.00 37.69 3.41
282 283 1.199327 TCTGATTCGGTGTCGTGACTC 59.801 52.381 1.23 0.00 37.69 3.36
283 284 0.109919 TGATTCGGTGTCGTGACTCG 60.110 55.000 1.23 5.90 41.41 4.18
284 285 0.109873 GATTCGGTGTCGTGACTCGT 60.110 55.000 12.96 0.24 40.80 4.18
285 286 0.386858 ATTCGGTGTCGTGACTCGTG 60.387 55.000 12.96 2.85 40.80 4.35
286 287 1.438562 TTCGGTGTCGTGACTCGTGA 61.439 55.000 12.96 4.67 40.80 4.35
287 288 1.440518 CGGTGTCGTGACTCGTGAG 60.441 63.158 1.23 0.00 40.80 3.51
288 289 1.081376 GGTGTCGTGACTCGTGAGG 60.081 63.158 1.43 0.00 40.80 3.86
289 290 1.081376 GTGTCGTGACTCGTGAGGG 60.081 63.158 1.43 0.00 40.80 4.30
290 291 1.228033 TGTCGTGACTCGTGAGGGA 60.228 57.895 1.43 0.00 40.80 4.20
291 292 1.209640 GTCGTGACTCGTGAGGGAC 59.790 63.158 1.43 0.33 40.80 4.46
328 329 4.166011 GCGCGGGCAAAGCAGTAG 62.166 66.667 20.76 0.00 39.62 2.57
329 330 4.166011 CGCGGGCAAAGCAGTAGC 62.166 66.667 0.00 0.00 42.56 3.58
330 331 3.055719 GCGGGCAAAGCAGTAGCA 61.056 61.111 0.00 0.00 45.49 3.49
331 332 2.625823 GCGGGCAAAGCAGTAGCAA 61.626 57.895 0.00 0.00 45.49 3.91
332 333 1.956043 CGGGCAAAGCAGTAGCAAA 59.044 52.632 0.00 0.00 45.49 3.68
333 334 0.313672 CGGGCAAAGCAGTAGCAAAA 59.686 50.000 0.00 0.00 45.49 2.44
334 335 1.783284 GGGCAAAGCAGTAGCAAAAC 58.217 50.000 0.00 0.00 45.49 2.43
335 336 1.605457 GGGCAAAGCAGTAGCAAAACC 60.605 52.381 0.00 0.00 45.49 3.27
336 337 1.068434 GGCAAAGCAGTAGCAAAACCA 59.932 47.619 0.00 0.00 45.49 3.67
337 338 2.127251 GCAAAGCAGTAGCAAAACCAC 58.873 47.619 0.00 0.00 45.49 4.16
338 339 2.384382 CAAAGCAGTAGCAAAACCACG 58.616 47.619 0.00 0.00 45.49 4.94
339 340 0.951558 AAGCAGTAGCAAAACCACGG 59.048 50.000 0.00 0.00 45.49 4.94
340 341 1.081442 GCAGTAGCAAAACCACGGC 60.081 57.895 0.00 0.00 41.58 5.68
341 342 1.791103 GCAGTAGCAAAACCACGGCA 61.791 55.000 0.00 0.00 41.58 5.69
342 343 0.238289 CAGTAGCAAAACCACGGCAG 59.762 55.000 0.00 0.00 0.00 4.85
343 344 0.889186 AGTAGCAAAACCACGGCAGG 60.889 55.000 0.00 0.00 0.00 4.85
344 345 2.265182 TAGCAAAACCACGGCAGGC 61.265 57.895 0.00 0.00 0.00 4.85
345 346 2.967507 TAGCAAAACCACGGCAGGCA 62.968 55.000 0.00 0.00 0.00 4.75
346 347 2.027460 CAAAACCACGGCAGGCAC 59.973 61.111 0.00 0.00 0.00 5.01
347 348 2.441164 AAAACCACGGCAGGCACA 60.441 55.556 0.00 0.00 0.00 4.57
348 349 2.489275 AAAACCACGGCAGGCACAG 61.489 57.895 0.00 0.00 0.00 3.66
349 350 3.714487 AAACCACGGCAGGCACAGT 62.714 57.895 0.00 0.00 0.00 3.55
350 351 4.935495 ACCACGGCAGGCACAGTG 62.935 66.667 0.00 0.00 0.00 3.66
351 352 4.624364 CCACGGCAGGCACAGTGA 62.624 66.667 4.15 0.00 36.79 3.41
352 353 3.046087 CACGGCAGGCACAGTGAG 61.046 66.667 4.15 0.00 36.79 3.51
353 354 4.320456 ACGGCAGGCACAGTGAGG 62.320 66.667 4.15 0.00 0.00 3.86
355 356 3.640407 GGCAGGCACAGTGAGGGA 61.640 66.667 4.15 0.00 0.00 4.20
356 357 2.431683 GCAGGCACAGTGAGGGAA 59.568 61.111 4.15 0.00 0.00 3.97
357 358 1.001641 GCAGGCACAGTGAGGGAAT 60.002 57.895 4.15 0.00 0.00 3.01
358 359 1.028868 GCAGGCACAGTGAGGGAATC 61.029 60.000 4.15 0.00 0.00 2.52
359 360 0.617413 CAGGCACAGTGAGGGAATCT 59.383 55.000 4.15 0.00 0.00 2.40
360 361 1.004044 CAGGCACAGTGAGGGAATCTT 59.996 52.381 4.15 0.00 0.00 2.40
361 362 1.707427 AGGCACAGTGAGGGAATCTTT 59.293 47.619 4.15 0.00 0.00 2.52
362 363 2.108952 AGGCACAGTGAGGGAATCTTTT 59.891 45.455 4.15 0.00 0.00 2.27
363 364 2.893489 GGCACAGTGAGGGAATCTTTTT 59.107 45.455 4.15 0.00 0.00 1.94
364 365 3.057245 GGCACAGTGAGGGAATCTTTTTC 60.057 47.826 4.15 0.00 0.00 2.29
365 366 3.823304 GCACAGTGAGGGAATCTTTTTCT 59.177 43.478 4.15 0.00 0.00 2.52
366 367 4.083057 GCACAGTGAGGGAATCTTTTTCTC 60.083 45.833 4.15 0.00 0.00 2.87
367 368 5.312079 CACAGTGAGGGAATCTTTTTCTCT 58.688 41.667 0.00 0.00 30.59 3.10
368 369 5.411053 CACAGTGAGGGAATCTTTTTCTCTC 59.589 44.000 8.04 8.04 44.32 3.20
369 370 5.309282 ACAGTGAGGGAATCTTTTTCTCTCT 59.691 40.000 14.46 0.59 44.36 3.10
370 371 6.183361 ACAGTGAGGGAATCTTTTTCTCTCTT 60.183 38.462 14.46 2.99 44.36 2.85
371 372 6.149142 CAGTGAGGGAATCTTTTTCTCTCTTG 59.851 42.308 14.46 9.92 44.36 3.02
372 373 6.000840 GTGAGGGAATCTTTTTCTCTCTTGT 58.999 40.000 14.46 0.00 44.36 3.16
373 374 6.148645 GTGAGGGAATCTTTTTCTCTCTTGTC 59.851 42.308 14.46 2.37 44.36 3.18
374 375 5.241662 AGGGAATCTTTTTCTCTCTTGTCG 58.758 41.667 0.00 0.00 0.00 4.35
375 376 4.142795 GGGAATCTTTTTCTCTCTTGTCGC 60.143 45.833 0.00 0.00 0.00 5.19
376 377 4.434857 GGAATCTTTTTCTCTCTTGTCGCG 60.435 45.833 0.00 0.00 0.00 5.87
377 378 2.404215 TCTTTTTCTCTCTTGTCGCGG 58.596 47.619 6.13 0.00 0.00 6.46
378 379 2.135933 CTTTTTCTCTCTTGTCGCGGT 58.864 47.619 6.13 0.00 0.00 5.68
379 380 2.234300 TTTTCTCTCTTGTCGCGGTT 57.766 45.000 6.13 0.00 0.00 4.44
380 381 1.497991 TTTCTCTCTTGTCGCGGTTG 58.502 50.000 6.13 0.00 0.00 3.77
381 382 0.944311 TTCTCTCTTGTCGCGGTTGC 60.944 55.000 6.13 0.00 37.91 4.17
382 383 2.357034 TCTCTTGTCGCGGTTGCC 60.357 61.111 6.13 0.00 38.08 4.52
383 384 2.664851 CTCTTGTCGCGGTTGCCA 60.665 61.111 6.13 0.00 38.08 4.92
384 385 2.664851 TCTTGTCGCGGTTGCCAG 60.665 61.111 6.13 0.00 38.08 4.85
385 386 4.389576 CTTGTCGCGGTTGCCAGC 62.390 66.667 6.13 0.00 38.08 4.85
393 394 4.338710 GGTTGCCAGCCACGGGTA 62.339 66.667 0.00 0.00 0.00 3.69
394 395 3.053896 GTTGCCAGCCACGGGTAC 61.054 66.667 0.00 0.00 0.00 3.34
398 399 4.446413 CCAGCCACGGGTACGGAC 62.446 72.222 0.00 0.00 46.48 4.79
399 400 3.379445 CAGCCACGGGTACGGACT 61.379 66.667 0.00 0.00 46.48 3.85
400 401 2.048023 CAGCCACGGGTACGGACTA 61.048 63.158 0.00 0.00 46.48 2.59
401 402 1.076485 AGCCACGGGTACGGACTAT 60.076 57.895 0.00 0.00 46.48 2.12
402 403 1.066918 GCCACGGGTACGGACTATG 59.933 63.158 0.00 0.00 46.48 2.23
403 404 1.737816 CCACGGGTACGGACTATGG 59.262 63.158 0.00 0.00 46.48 2.74
404 405 0.752743 CCACGGGTACGGACTATGGA 60.753 60.000 9.19 0.00 46.48 3.41
405 406 0.666913 CACGGGTACGGACTATGGAG 59.333 60.000 0.00 0.00 46.48 3.86
406 407 0.548031 ACGGGTACGGACTATGGAGA 59.452 55.000 0.00 0.00 46.48 3.71
407 408 1.236628 CGGGTACGGACTATGGAGAG 58.763 60.000 0.00 0.00 36.18 3.20
408 409 1.202734 CGGGTACGGACTATGGAGAGA 60.203 57.143 0.00 0.00 36.18 3.10
409 410 2.552591 CGGGTACGGACTATGGAGAGAT 60.553 54.545 0.00 0.00 36.18 2.75
410 411 2.820787 GGGTACGGACTATGGAGAGATG 59.179 54.545 0.00 0.00 0.00 2.90
411 412 2.820787 GGTACGGACTATGGAGAGATGG 59.179 54.545 0.00 0.00 0.00 3.51
412 413 3.498121 GGTACGGACTATGGAGAGATGGA 60.498 52.174 0.00 0.00 0.00 3.41
413 414 2.870175 ACGGACTATGGAGAGATGGAG 58.130 52.381 0.00 0.00 0.00 3.86
414 415 1.543802 CGGACTATGGAGAGATGGAGC 59.456 57.143 0.00 0.00 0.00 4.70
415 416 2.603021 GGACTATGGAGAGATGGAGCA 58.397 52.381 0.00 0.00 0.00 4.26
416 417 2.968574 GGACTATGGAGAGATGGAGCAA 59.031 50.000 0.00 0.00 0.00 3.91
417 418 3.006752 GGACTATGGAGAGATGGAGCAAG 59.993 52.174 0.00 0.00 0.00 4.01
418 419 2.368221 ACTATGGAGAGATGGAGCAAGC 59.632 50.000 0.00 0.00 0.00 4.01
419 420 0.106335 ATGGAGAGATGGAGCAAGCG 59.894 55.000 0.00 0.00 0.00 4.68
420 421 0.972471 TGGAGAGATGGAGCAAGCGA 60.972 55.000 0.00 0.00 0.00 4.93
421 422 0.529555 GGAGAGATGGAGCAAGCGAC 60.530 60.000 0.00 0.00 0.00 5.19
422 423 0.869454 GAGAGATGGAGCAAGCGACG 60.869 60.000 0.00 0.00 0.00 5.12
423 424 2.510238 AGATGGAGCAAGCGACGC 60.510 61.111 13.03 13.03 0.00 5.19
424 425 2.815211 GATGGAGCAAGCGACGCA 60.815 61.111 23.70 0.00 0.00 5.24
425 426 2.358615 ATGGAGCAAGCGACGCAA 60.359 55.556 23.70 0.00 0.00 4.85
427 428 4.451652 GGAGCAAGCGACGCAAGC 62.452 66.667 23.70 23.56 45.62 4.01
428 429 3.716006 GAGCAAGCGACGCAAGCA 61.716 61.111 29.40 0.00 45.62 3.91
429 430 3.642008 GAGCAAGCGACGCAAGCAG 62.642 63.158 29.40 13.80 45.62 4.24
434 435 4.436448 GCGACGCAAGCAGCTCAC 62.436 66.667 16.42 0.00 42.61 3.51
435 436 4.126390 CGACGCAAGCAGCTCACG 62.126 66.667 13.90 13.90 42.61 4.35
436 437 3.782244 GACGCAAGCAGCTCACGG 61.782 66.667 18.33 2.32 42.61 4.94
439 440 2.669569 GCAAGCAGCTCACGGGAA 60.670 61.111 0.00 0.00 41.15 3.97
440 441 2.970974 GCAAGCAGCTCACGGGAAC 61.971 63.158 0.00 0.00 41.15 3.62
452 453 3.658422 GGGAACGGGAGGGGCTTT 61.658 66.667 0.00 0.00 0.00 3.51
453 454 2.045242 GGAACGGGAGGGGCTTTC 60.045 66.667 0.00 0.00 0.00 2.62
454 455 2.436115 GAACGGGAGGGGCTTTCG 60.436 66.667 0.00 0.00 0.00 3.46
455 456 3.246880 AACGGGAGGGGCTTTCGT 61.247 61.111 0.00 0.00 35.48 3.85
456 457 3.249837 AACGGGAGGGGCTTTCGTC 62.250 63.158 0.00 0.00 33.34 4.20
457 458 4.814294 CGGGAGGGGCTTTCGTCG 62.814 72.222 0.00 0.00 0.00 5.12
458 459 4.468689 GGGAGGGGCTTTCGTCGG 62.469 72.222 0.00 0.00 0.00 4.79
459 460 3.703127 GGAGGGGCTTTCGTCGGT 61.703 66.667 0.00 0.00 0.00 4.69
460 461 2.434359 GAGGGGCTTTCGTCGGTG 60.434 66.667 0.00 0.00 0.00 4.94
461 462 4.699522 AGGGGCTTTCGTCGGTGC 62.700 66.667 0.00 0.00 0.00 5.01
462 463 4.699522 GGGGCTTTCGTCGGTGCT 62.700 66.667 0.00 0.00 0.00 4.40
463 464 3.119096 GGGCTTTCGTCGGTGCTC 61.119 66.667 0.00 0.00 0.00 4.26
464 465 3.119096 GGCTTTCGTCGGTGCTCC 61.119 66.667 0.00 0.00 0.00 4.70
474 475 3.655481 GGTGCTCCGTCCAACTTG 58.345 61.111 0.00 0.00 0.00 3.16
475 476 1.966451 GGTGCTCCGTCCAACTTGG 60.966 63.158 0.74 0.74 39.43 3.61
476 477 2.281484 TGCTCCGTCCAACTTGGC 60.281 61.111 2.52 0.00 37.47 4.52
477 478 3.423154 GCTCCGTCCAACTTGGCG 61.423 66.667 14.24 14.24 37.47 5.69
478 479 2.030562 CTCCGTCCAACTTGGCGT 59.969 61.111 17.69 0.00 37.47 5.68
479 480 2.280524 TCCGTCCAACTTGGCGTG 60.281 61.111 17.69 11.94 37.47 5.34
480 481 3.353836 CCGTCCAACTTGGCGTGG 61.354 66.667 17.69 9.82 37.47 4.94
481 482 4.025401 CGTCCAACTTGGCGTGGC 62.025 66.667 13.40 0.00 37.47 5.01
482 483 4.025401 GTCCAACTTGGCGTGGCG 62.025 66.667 2.52 0.00 37.47 5.69
483 484 4.555709 TCCAACTTGGCGTGGCGT 62.556 61.111 2.52 0.00 37.47 5.68
484 485 4.326766 CCAACTTGGCGTGGCGTG 62.327 66.667 0.00 0.00 0.00 5.34
485 486 4.980903 CAACTTGGCGTGGCGTGC 62.981 66.667 0.00 0.00 0.00 5.34
502 503 2.436646 CCCGTGCGAGCCAGAATT 60.437 61.111 0.00 0.00 0.00 2.17
503 504 2.040544 CCCGTGCGAGCCAGAATTT 61.041 57.895 0.00 0.00 0.00 1.82
504 505 1.586154 CCCGTGCGAGCCAGAATTTT 61.586 55.000 0.00 0.00 0.00 1.82
505 506 0.179189 CCGTGCGAGCCAGAATTTTC 60.179 55.000 0.00 0.00 0.00 2.29
506 507 0.179189 CGTGCGAGCCAGAATTTTCC 60.179 55.000 0.00 0.00 0.00 3.13
507 508 0.179189 GTGCGAGCCAGAATTTTCCG 60.179 55.000 0.00 0.00 0.00 4.30
508 509 0.321210 TGCGAGCCAGAATTTTCCGA 60.321 50.000 0.00 0.00 0.00 4.55
509 510 1.017387 GCGAGCCAGAATTTTCCGAT 58.983 50.000 0.00 0.00 0.00 4.18
510 511 1.401905 GCGAGCCAGAATTTTCCGATT 59.598 47.619 0.00 0.00 0.00 3.34
511 512 2.792542 GCGAGCCAGAATTTTCCGATTG 60.793 50.000 0.00 0.00 0.00 2.67
512 513 2.677836 CGAGCCAGAATTTTCCGATTGA 59.322 45.455 0.00 0.00 0.00 2.57
513 514 3.485877 CGAGCCAGAATTTTCCGATTGAC 60.486 47.826 0.00 0.00 0.00 3.18
514 515 2.420022 AGCCAGAATTTTCCGATTGACG 59.580 45.455 0.00 0.00 42.18 4.35
531 532 2.935955 GGCGTCACCGTTGTTCTG 59.064 61.111 0.00 0.00 36.15 3.02
532 533 2.248431 GCGTCACCGTTGTTCTGC 59.752 61.111 0.00 0.00 36.15 4.26
533 534 2.244651 GCGTCACCGTTGTTCTGCT 61.245 57.895 0.00 0.00 36.15 4.24
534 535 1.853319 CGTCACCGTTGTTCTGCTC 59.147 57.895 0.00 0.00 0.00 4.26
535 536 0.597637 CGTCACCGTTGTTCTGCTCT 60.598 55.000 0.00 0.00 0.00 4.09
536 537 1.583054 GTCACCGTTGTTCTGCTCTT 58.417 50.000 0.00 0.00 0.00 2.85
537 538 1.940613 GTCACCGTTGTTCTGCTCTTT 59.059 47.619 0.00 0.00 0.00 2.52
538 539 2.032808 GTCACCGTTGTTCTGCTCTTTC 60.033 50.000 0.00 0.00 0.00 2.62
539 540 1.264288 CACCGTTGTTCTGCTCTTTCC 59.736 52.381 0.00 0.00 0.00 3.13
540 541 0.875059 CCGTTGTTCTGCTCTTTCCC 59.125 55.000 0.00 0.00 0.00 3.97
541 542 1.543429 CCGTTGTTCTGCTCTTTCCCT 60.543 52.381 0.00 0.00 0.00 4.20
542 543 2.222027 CGTTGTTCTGCTCTTTCCCTT 58.778 47.619 0.00 0.00 0.00 3.95
543 544 2.618709 CGTTGTTCTGCTCTTTCCCTTT 59.381 45.455 0.00 0.00 0.00 3.11
544 545 3.548818 CGTTGTTCTGCTCTTTCCCTTTG 60.549 47.826 0.00 0.00 0.00 2.77
545 546 3.576078 TGTTCTGCTCTTTCCCTTTGA 57.424 42.857 0.00 0.00 0.00 2.69
546 547 4.104383 TGTTCTGCTCTTTCCCTTTGAT 57.896 40.909 0.00 0.00 0.00 2.57
547 548 3.822735 TGTTCTGCTCTTTCCCTTTGATG 59.177 43.478 0.00 0.00 0.00 3.07
548 549 4.074970 GTTCTGCTCTTTCCCTTTGATGA 58.925 43.478 0.00 0.00 0.00 2.92
549 550 4.581309 TCTGCTCTTTCCCTTTGATGAT 57.419 40.909 0.00 0.00 0.00 2.45
550 551 4.267536 TCTGCTCTTTCCCTTTGATGATG 58.732 43.478 0.00 0.00 0.00 3.07
551 552 4.019051 TCTGCTCTTTCCCTTTGATGATGA 60.019 41.667 0.00 0.00 0.00 2.92
552 553 4.863548 TGCTCTTTCCCTTTGATGATGAT 58.136 39.130 0.00 0.00 0.00 2.45
553 554 4.643334 TGCTCTTTCCCTTTGATGATGATG 59.357 41.667 0.00 0.00 0.00 3.07
554 555 4.885907 GCTCTTTCCCTTTGATGATGATGA 59.114 41.667 0.00 0.00 0.00 2.92
555 556 5.535406 GCTCTTTCCCTTTGATGATGATGAT 59.465 40.000 0.00 0.00 0.00 2.45
556 557 6.515200 GCTCTTTCCCTTTGATGATGATGATG 60.515 42.308 0.00 0.00 0.00 3.07
557 558 6.665695 TCTTTCCCTTTGATGATGATGATGA 58.334 36.000 0.00 0.00 0.00 2.92
558 559 6.771267 TCTTTCCCTTTGATGATGATGATGAG 59.229 38.462 0.00 0.00 0.00 2.90
559 560 5.899631 TCCCTTTGATGATGATGATGAGA 57.100 39.130 0.00 0.00 0.00 3.27
560 561 6.449830 TCCCTTTGATGATGATGATGAGAT 57.550 37.500 0.00 0.00 0.00 2.75
561 562 6.238648 TCCCTTTGATGATGATGATGAGATG 58.761 40.000 0.00 0.00 0.00 2.90
562 563 6.043938 TCCCTTTGATGATGATGATGAGATGA 59.956 38.462 0.00 0.00 0.00 2.92
563 564 6.372937 CCCTTTGATGATGATGATGAGATGAG 59.627 42.308 0.00 0.00 0.00 2.90
564 565 7.162082 CCTTTGATGATGATGATGAGATGAGA 58.838 38.462 0.00 0.00 0.00 3.27
565 566 7.118535 CCTTTGATGATGATGATGAGATGAGAC 59.881 40.741 0.00 0.00 0.00 3.36
566 567 5.710984 TGATGATGATGATGAGATGAGACG 58.289 41.667 0.00 0.00 0.00 4.18
567 568 5.475909 TGATGATGATGATGAGATGAGACGA 59.524 40.000 0.00 0.00 0.00 4.20
568 569 5.373981 TGATGATGATGAGATGAGACGAG 57.626 43.478 0.00 0.00 0.00 4.18
569 570 3.639716 TGATGATGAGATGAGACGAGC 57.360 47.619 0.00 0.00 0.00 5.03
570 571 2.954318 TGATGATGAGATGAGACGAGCA 59.046 45.455 0.00 0.00 0.00 4.26
571 572 3.004524 TGATGATGAGATGAGACGAGCAG 59.995 47.826 0.00 0.00 0.00 4.24
572 573 2.648059 TGATGAGATGAGACGAGCAGA 58.352 47.619 0.00 0.00 0.00 4.26
573 574 2.617774 TGATGAGATGAGACGAGCAGAG 59.382 50.000 0.00 0.00 0.00 3.35
574 575 0.737804 TGAGATGAGACGAGCAGAGC 59.262 55.000 0.00 0.00 0.00 4.09
575 576 0.316937 GAGATGAGACGAGCAGAGCG 60.317 60.000 0.00 0.00 0.00 5.03
576 577 1.299014 GATGAGACGAGCAGAGCGG 60.299 63.158 0.00 0.00 0.00 5.52
577 578 1.999071 GATGAGACGAGCAGAGCGGT 61.999 60.000 0.00 0.00 0.00 5.68
578 579 1.599606 ATGAGACGAGCAGAGCGGTT 61.600 55.000 0.00 0.00 0.00 4.44
579 580 1.515304 GAGACGAGCAGAGCGGTTC 60.515 63.158 0.00 0.00 0.00 3.62
580 581 2.507324 GACGAGCAGAGCGGTTCC 60.507 66.667 0.00 0.00 0.00 3.62
581 582 4.421479 ACGAGCAGAGCGGTTCCG 62.421 66.667 6.90 6.90 0.00 4.30
582 583 4.421479 CGAGCAGAGCGGTTCCGT 62.421 66.667 12.81 0.00 0.00 4.69
583 584 2.507324 GAGCAGAGCGGTTCCGTC 60.507 66.667 12.81 8.90 0.00 4.79
584 585 2.992114 AGCAGAGCGGTTCCGTCT 60.992 61.111 12.81 9.95 0.00 4.18
585 586 1.654954 GAGCAGAGCGGTTCCGTCTA 61.655 60.000 12.81 0.00 0.00 2.59
586 587 1.516603 GCAGAGCGGTTCCGTCTAC 60.517 63.158 12.81 5.89 0.00 2.59
587 588 1.226323 CAGAGCGGTTCCGTCTACG 60.226 63.158 12.81 0.00 39.44 3.51
588 589 1.673665 AGAGCGGTTCCGTCTACGT 60.674 57.895 12.81 0.00 37.74 3.57
589 590 0.391661 AGAGCGGTTCCGTCTACGTA 60.392 55.000 12.81 0.00 37.74 3.57
590 591 0.247854 GAGCGGTTCCGTCTACGTAC 60.248 60.000 12.81 0.00 37.74 3.67
591 592 1.581147 GCGGTTCCGTCTACGTACG 60.581 63.158 15.01 15.01 42.49 3.67
592 593 1.787847 CGGTTCCGTCTACGTACGT 59.212 57.895 25.98 25.98 41.27 3.57
593 594 0.996462 CGGTTCCGTCTACGTACGTA 59.004 55.000 25.41 25.41 41.27 3.57
594 595 1.266891 CGGTTCCGTCTACGTACGTAC 60.267 57.143 23.60 16.70 41.27 3.67
614 615 4.933064 CGCGGCCGACCTGATCTC 62.933 72.222 33.48 6.41 36.29 2.75
615 616 3.838271 GCGGCCGACCTGATCTCA 61.838 66.667 33.48 0.00 0.00 3.27
616 617 2.105128 CGGCCGACCTGATCTCAC 59.895 66.667 24.07 0.00 0.00 3.51
617 618 2.501610 GGCCGACCTGATCTCACC 59.498 66.667 0.00 0.00 0.00 4.02
618 619 2.501610 GCCGACCTGATCTCACCC 59.498 66.667 0.00 0.00 0.00 4.61
619 620 2.808315 CCGACCTGATCTCACCCG 59.192 66.667 0.00 0.00 0.00 5.28
620 621 1.753078 CCGACCTGATCTCACCCGA 60.753 63.158 0.00 0.00 0.00 5.14
621 622 1.433879 CGACCTGATCTCACCCGAC 59.566 63.158 0.00 0.00 0.00 4.79
622 623 1.817209 GACCTGATCTCACCCGACC 59.183 63.158 0.00 0.00 0.00 4.79
623 624 2.005960 GACCTGATCTCACCCGACCG 62.006 65.000 0.00 0.00 0.00 4.79
624 625 2.105128 CTGATCTCACCCGACCGC 59.895 66.667 0.00 0.00 0.00 5.68
625 626 3.758088 CTGATCTCACCCGACCGCG 62.758 68.421 0.00 0.00 37.24 6.46
649 650 3.488090 CCGAGCCGAGCCGAAAAC 61.488 66.667 7.80 0.00 0.00 2.43
650 651 3.488090 CGAGCCGAGCCGAAAACC 61.488 66.667 0.00 0.00 0.00 3.27
651 652 3.125573 GAGCCGAGCCGAAAACCC 61.126 66.667 0.00 0.00 0.00 4.11
652 653 3.894547 GAGCCGAGCCGAAAACCCA 62.895 63.158 0.00 0.00 0.00 4.51
653 654 3.431725 GCCGAGCCGAAAACCCAG 61.432 66.667 0.00 0.00 0.00 4.45
654 655 2.746277 CCGAGCCGAAAACCCAGG 60.746 66.667 0.00 0.00 0.00 4.45
655 656 2.345991 CGAGCCGAAAACCCAGGA 59.654 61.111 0.00 0.00 0.00 3.86
656 657 2.033194 CGAGCCGAAAACCCAGGAC 61.033 63.158 0.00 0.00 0.00 3.85
657 658 1.072505 GAGCCGAAAACCCAGGACA 59.927 57.895 0.00 0.00 0.00 4.02
658 659 0.955919 GAGCCGAAAACCCAGGACAG 60.956 60.000 0.00 0.00 0.00 3.51
659 660 1.971695 GCCGAAAACCCAGGACAGG 60.972 63.158 0.00 0.00 0.00 4.00
660 661 1.454539 CCGAAAACCCAGGACAGGT 59.545 57.895 0.00 0.00 40.14 4.00
661 662 0.889186 CCGAAAACCCAGGACAGGTG 60.889 60.000 0.00 0.00 37.78 4.00
662 663 0.889186 CGAAAACCCAGGACAGGTGG 60.889 60.000 0.00 0.00 37.78 4.61
663 664 0.476771 GAAAACCCAGGACAGGTGGA 59.523 55.000 0.00 0.00 37.78 4.02
664 665 0.185175 AAAACCCAGGACAGGTGGAC 59.815 55.000 0.00 0.00 37.78 4.02
665 666 1.716028 AAACCCAGGACAGGTGGACC 61.716 60.000 0.00 0.00 37.78 4.46
1239 1252 5.720041 AGTCTCTGTACTTGTATTTGCCCTA 59.280 40.000 0.00 0.00 0.00 3.53
1443 1475 6.493116 CAATCTGTAAAGATGGAGATGCAAC 58.507 40.000 0.00 0.00 0.00 4.17
1508 1579 1.886542 CTGGTGTTAGGAAAGGGTTGC 59.113 52.381 0.00 0.00 0.00 4.17
1668 1766 7.606858 TTTGTTTGAATGAAATGCAGTTTGA 57.393 28.000 0.00 0.00 29.90 2.69
1806 2000 7.810766 CAGTGTAAACAGTGTGAATTTTTGT 57.189 32.000 9.36 0.00 41.23 2.83
1807 2001 7.884668 CAGTGTAAACAGTGTGAATTTTTGTC 58.115 34.615 9.36 0.00 41.23 3.18
1808 2002 7.540400 CAGTGTAAACAGTGTGAATTTTTGTCA 59.460 33.333 9.36 0.00 41.23 3.58
1809 2003 7.754924 AGTGTAAACAGTGTGAATTTTTGTCAG 59.245 33.333 0.00 0.00 0.00 3.51
1810 2004 7.009174 GTGTAAACAGTGTGAATTTTTGTCAGG 59.991 37.037 0.00 0.00 0.00 3.86
1811 2005 5.659440 AACAGTGTGAATTTTTGTCAGGT 57.341 34.783 0.00 0.00 0.00 4.00
1812 2006 5.659440 ACAGTGTGAATTTTTGTCAGGTT 57.341 34.783 0.00 0.00 0.00 3.50
1813 2007 6.036577 ACAGTGTGAATTTTTGTCAGGTTT 57.963 33.333 0.00 0.00 0.00 3.27
1814 2008 5.868801 ACAGTGTGAATTTTTGTCAGGTTTG 59.131 36.000 0.00 0.00 0.00 2.93
1815 2009 6.098679 CAGTGTGAATTTTTGTCAGGTTTGA 58.901 36.000 0.00 0.00 0.00 2.69
1816 2010 6.589523 CAGTGTGAATTTTTGTCAGGTTTGAA 59.410 34.615 0.00 0.00 34.49 2.69
1817 2011 6.813152 AGTGTGAATTTTTGTCAGGTTTGAAG 59.187 34.615 0.00 0.00 34.49 3.02
1818 2012 6.589907 GTGTGAATTTTTGTCAGGTTTGAAGT 59.410 34.615 0.00 0.00 34.49 3.01
1819 2013 6.589523 TGTGAATTTTTGTCAGGTTTGAAGTG 59.410 34.615 0.00 0.00 34.49 3.16
1820 2014 6.589907 GTGAATTTTTGTCAGGTTTGAAGTGT 59.410 34.615 0.00 0.00 34.49 3.55
1821 2015 6.811170 TGAATTTTTGTCAGGTTTGAAGTGTC 59.189 34.615 0.00 0.00 34.49 3.67
1822 2016 5.713792 TTTTTGTCAGGTTTGAAGTGTCA 57.286 34.783 0.00 0.00 34.49 3.58
1823 2017 5.913137 TTTTGTCAGGTTTGAAGTGTCAT 57.087 34.783 0.00 0.00 34.49 3.06
1824 2018 5.913137 TTTGTCAGGTTTGAAGTGTCATT 57.087 34.783 0.00 0.00 34.49 2.57
1825 2019 5.913137 TTGTCAGGTTTGAAGTGTCATTT 57.087 34.783 0.00 0.00 34.49 2.32
1826 2020 5.913137 TGTCAGGTTTGAAGTGTCATTTT 57.087 34.783 0.00 0.00 34.49 1.82
1827 2021 6.279513 TGTCAGGTTTGAAGTGTCATTTTT 57.720 33.333 0.00 0.00 34.49 1.94
1828 2022 7.397892 TGTCAGGTTTGAAGTGTCATTTTTA 57.602 32.000 0.00 0.00 34.49 1.52
1829 2023 7.831753 TGTCAGGTTTGAAGTGTCATTTTTAA 58.168 30.769 0.00 0.00 34.49 1.52
1830 2024 7.757624 TGTCAGGTTTGAAGTGTCATTTTTAAC 59.242 33.333 0.00 0.00 34.49 2.01
1831 2025 7.973944 GTCAGGTTTGAAGTGTCATTTTTAACT 59.026 33.333 0.00 0.00 34.49 2.24
1832 2026 7.973388 TCAGGTTTGAAGTGTCATTTTTAACTG 59.027 33.333 0.00 0.00 32.48 3.16
1833 2027 6.756542 AGGTTTGAAGTGTCATTTTTAACTGC 59.243 34.615 0.00 0.00 32.48 4.40
1834 2028 6.756542 GGTTTGAAGTGTCATTTTTAACTGCT 59.243 34.615 0.00 0.00 32.48 4.24
1835 2029 7.918562 GGTTTGAAGTGTCATTTTTAACTGCTA 59.081 33.333 0.00 0.00 32.48 3.49
1836 2030 9.296400 GTTTGAAGTGTCATTTTTAACTGCTAA 57.704 29.630 0.00 0.00 32.48 3.09
1838 2032 9.462174 TTGAAGTGTCATTTTTAACTGCTAATG 57.538 29.630 0.00 0.00 32.48 1.90
1839 2033 8.629158 TGAAGTGTCATTTTTAACTGCTAATGT 58.371 29.630 0.00 0.00 31.59 2.71
1841 2035 9.893305 AAGTGTCATTTTTAACTGCTAATGTAC 57.107 29.630 0.00 0.00 31.59 2.90
1842 2036 9.284968 AGTGTCATTTTTAACTGCTAATGTACT 57.715 29.630 0.00 0.00 31.59 2.73
1843 2037 9.329913 GTGTCATTTTTAACTGCTAATGTACTG 57.670 33.333 0.00 0.00 31.59 2.74
1844 2038 9.278978 TGTCATTTTTAACTGCTAATGTACTGA 57.721 29.630 0.00 0.00 31.59 3.41
2061 2380 2.663119 GCAGCAAAAATAAGTGAAGCCG 59.337 45.455 0.00 0.00 0.00 5.52
2277 2645 6.623486 TGCATATGGATCAAAAGAAACACAG 58.377 36.000 4.56 0.00 0.00 3.66
2354 2802 0.837691 TCTTCCTCTGCCTCTGCCAA 60.838 55.000 0.00 0.00 36.33 4.52
2466 2914 1.338484 TGCTGCATGTTGAGAGGACTC 60.338 52.381 0.00 0.00 42.88 3.36
2569 3017 6.800892 GCTGCAATCAAAGAAAAACAACAAAA 59.199 30.769 0.00 0.00 0.00 2.44
2570 3018 7.007636 GCTGCAATCAAAGAAAAACAACAAAAG 59.992 33.333 0.00 0.00 0.00 2.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.091441 TGCAACAACAATAACTGAACAAAACC 59.909 34.615 0.00 0.00 0.00 3.27
1 2 6.953189 GTGCAACAACAATAACTGAACAAAAC 59.047 34.615 0.00 0.00 36.32 2.43
2 3 6.091441 GGTGCAACAACAATAACTGAACAAAA 59.909 34.615 0.00 0.00 39.98 2.44
3 4 5.578727 GGTGCAACAACAATAACTGAACAAA 59.421 36.000 0.00 0.00 39.98 2.83
4 5 5.105554 AGGTGCAACAACAATAACTGAACAA 60.106 36.000 3.64 0.00 39.98 2.83
5 6 4.400884 AGGTGCAACAACAATAACTGAACA 59.599 37.500 3.64 0.00 39.98 3.18
6 7 4.932146 AGGTGCAACAACAATAACTGAAC 58.068 39.130 3.64 0.00 39.98 3.18
7 8 5.126222 TCAAGGTGCAACAACAATAACTGAA 59.874 36.000 3.64 0.00 39.98 3.02
8 9 4.642437 TCAAGGTGCAACAACAATAACTGA 59.358 37.500 3.64 0.00 39.98 3.41
9 10 4.930963 TCAAGGTGCAACAACAATAACTG 58.069 39.130 3.64 0.00 39.98 3.16
10 11 5.348164 GTTCAAGGTGCAACAACAATAACT 58.652 37.500 3.64 0.00 39.98 2.24
11 12 4.206200 CGTTCAAGGTGCAACAACAATAAC 59.794 41.667 3.64 0.00 39.98 1.89
12 13 4.096532 TCGTTCAAGGTGCAACAACAATAA 59.903 37.500 3.64 0.00 39.98 1.40
13 14 3.628032 TCGTTCAAGGTGCAACAACAATA 59.372 39.130 3.64 0.00 39.98 1.90
14 15 2.425312 TCGTTCAAGGTGCAACAACAAT 59.575 40.909 3.64 0.00 39.98 2.71
15 16 1.813178 TCGTTCAAGGTGCAACAACAA 59.187 42.857 3.64 0.00 39.98 2.83
16 17 1.454201 TCGTTCAAGGTGCAACAACA 58.546 45.000 3.64 0.00 39.98 3.33
17 18 2.450160 CTTCGTTCAAGGTGCAACAAC 58.550 47.619 3.64 0.00 39.98 3.32
18 19 1.403679 CCTTCGTTCAAGGTGCAACAA 59.596 47.619 3.64 0.00 46.36 2.83
19 20 1.021202 CCTTCGTTCAAGGTGCAACA 58.979 50.000 3.64 0.00 46.36 3.33
20 21 3.845625 CCTTCGTTCAAGGTGCAAC 57.154 52.632 0.00 0.00 46.36 4.17
27 28 3.855689 AATGGCATTCCTTCGTTCAAG 57.144 42.857 6.96 0.00 0.00 3.02
28 29 5.708948 CTTTAATGGCATTCCTTCGTTCAA 58.291 37.500 17.41 0.00 0.00 2.69
29 30 4.380444 GCTTTAATGGCATTCCTTCGTTCA 60.380 41.667 17.41 0.00 0.00 3.18
30 31 4.105486 GCTTTAATGGCATTCCTTCGTTC 58.895 43.478 17.41 0.00 0.00 3.95
31 32 3.119137 GGCTTTAATGGCATTCCTTCGTT 60.119 43.478 17.41 0.00 0.00 3.85
32 33 2.427095 GGCTTTAATGGCATTCCTTCGT 59.573 45.455 17.41 0.00 0.00 3.85
33 34 2.541588 CGGCTTTAATGGCATTCCTTCG 60.542 50.000 17.41 11.46 0.00 3.79
34 35 2.687935 TCGGCTTTAATGGCATTCCTTC 59.312 45.455 17.41 5.07 0.00 3.46
35 36 2.733956 TCGGCTTTAATGGCATTCCTT 58.266 42.857 17.41 0.00 0.00 3.36
36 37 2.435372 TCGGCTTTAATGGCATTCCT 57.565 45.000 17.41 0.00 0.00 3.36
37 38 2.622942 TCATCGGCTTTAATGGCATTCC 59.377 45.455 17.41 10.67 0.00 3.01
38 39 3.988379 TCATCGGCTTTAATGGCATTC 57.012 42.857 17.41 1.75 0.00 2.67
39 40 4.081752 TGTTTCATCGGCTTTAATGGCATT 60.082 37.500 18.01 18.01 0.00 3.56
40 41 3.446873 TGTTTCATCGGCTTTAATGGCAT 59.553 39.130 14.14 0.00 0.00 4.40
41 42 2.822561 TGTTTCATCGGCTTTAATGGCA 59.177 40.909 14.14 0.00 0.00 4.92
42 43 3.502191 TGTTTCATCGGCTTTAATGGC 57.498 42.857 4.96 4.96 0.00 4.40
43 44 4.734854 CGAATGTTTCATCGGCTTTAATGG 59.265 41.667 0.00 0.00 35.49 3.16
44 45 5.568482 TCGAATGTTTCATCGGCTTTAATG 58.432 37.500 0.00 0.00 39.45 1.90
45 46 5.811399 TCGAATGTTTCATCGGCTTTAAT 57.189 34.783 0.00 0.00 39.45 1.40
46 47 5.811399 ATCGAATGTTTCATCGGCTTTAA 57.189 34.783 0.00 0.00 39.45 1.52
47 48 5.050363 GCTATCGAATGTTTCATCGGCTTTA 60.050 40.000 0.00 0.00 39.45 1.85
48 49 4.260784 GCTATCGAATGTTTCATCGGCTTT 60.261 41.667 0.00 0.00 39.45 3.51
49 50 3.248602 GCTATCGAATGTTTCATCGGCTT 59.751 43.478 0.00 0.00 39.45 4.35
50 51 2.802816 GCTATCGAATGTTTCATCGGCT 59.197 45.455 0.00 0.00 39.45 5.52
51 52 2.096218 GGCTATCGAATGTTTCATCGGC 60.096 50.000 0.00 0.00 39.45 5.54
52 53 2.155732 CGGCTATCGAATGTTTCATCGG 59.844 50.000 0.00 0.00 42.43 4.18
53 54 3.049912 TCGGCTATCGAATGTTTCATCG 58.950 45.455 0.00 0.00 45.86 3.84
64 65 3.592814 CAGCGGGTCGGCTATCGA 61.593 66.667 2.77 0.00 46.77 3.59
66 67 3.850095 GAGCAGCGGGTCGGCTATC 62.850 68.421 0.00 1.95 46.17 2.08
67 68 3.917760 GAGCAGCGGGTCGGCTAT 61.918 66.667 0.00 0.00 46.17 2.97
73 74 4.373116 TTCACGGAGCAGCGGGTC 62.373 66.667 7.57 7.57 40.81 4.46
74 75 4.379243 CTTCACGGAGCAGCGGGT 62.379 66.667 0.00 0.00 0.00 5.28
75 76 4.379243 ACTTCACGGAGCAGCGGG 62.379 66.667 0.00 0.00 0.00 6.13
76 77 3.114616 CACTTCACGGAGCAGCGG 61.115 66.667 0.00 0.00 0.00 5.52
77 78 3.114616 CCACTTCACGGAGCAGCG 61.115 66.667 0.00 0.00 0.00 5.18
78 79 2.029844 GTCCACTTCACGGAGCAGC 61.030 63.158 0.00 0.00 31.65 5.25
79 80 0.946221 GTGTCCACTTCACGGAGCAG 60.946 60.000 0.00 0.00 31.65 4.24
80 81 1.069090 GTGTCCACTTCACGGAGCA 59.931 57.895 0.00 0.00 31.65 4.26
81 82 3.952811 GTGTCCACTTCACGGAGC 58.047 61.111 0.00 0.00 31.65 4.70
86 87 1.337071 TCACTCTCGTGTCCACTTCAC 59.663 52.381 0.00 0.00 41.89 3.18
87 88 1.609072 CTCACTCTCGTGTCCACTTCA 59.391 52.381 0.00 0.00 41.89 3.02
88 89 1.880675 TCTCACTCTCGTGTCCACTTC 59.119 52.381 0.00 0.00 41.89 3.01
89 90 1.883275 CTCTCACTCTCGTGTCCACTT 59.117 52.381 0.00 0.00 41.89 3.16
90 91 1.072489 TCTCTCACTCTCGTGTCCACT 59.928 52.381 0.00 0.00 41.89 4.00
91 92 1.466950 CTCTCTCACTCTCGTGTCCAC 59.533 57.143 0.00 0.00 41.89 4.02
92 93 1.348036 TCTCTCTCACTCTCGTGTCCA 59.652 52.381 0.00 0.00 41.89 4.02
93 94 2.006888 CTCTCTCTCACTCTCGTGTCC 58.993 57.143 0.00 0.00 41.89 4.02
94 95 1.396996 GCTCTCTCTCACTCTCGTGTC 59.603 57.143 0.00 0.00 41.89 3.67
95 96 1.448985 GCTCTCTCTCACTCTCGTGT 58.551 55.000 0.00 0.00 41.89 4.49
96 97 0.732571 GGCTCTCTCTCACTCTCGTG 59.267 60.000 0.00 0.00 42.59 4.35
97 98 0.742990 CGGCTCTCTCTCACTCTCGT 60.743 60.000 0.00 0.00 0.00 4.18
98 99 1.436195 CCGGCTCTCTCTCACTCTCG 61.436 65.000 0.00 0.00 0.00 4.04
99 100 1.724582 GCCGGCTCTCTCTCACTCTC 61.725 65.000 22.15 0.00 0.00 3.20
100 101 1.752694 GCCGGCTCTCTCTCACTCT 60.753 63.158 22.15 0.00 0.00 3.24
101 102 2.804856 GCCGGCTCTCTCTCACTC 59.195 66.667 22.15 0.00 0.00 3.51
102 103 3.137459 CGCCGGCTCTCTCTCACT 61.137 66.667 26.68 0.00 0.00 3.41
103 104 3.444805 ACGCCGGCTCTCTCTCAC 61.445 66.667 26.68 0.00 0.00 3.51
104 105 3.443925 CACGCCGGCTCTCTCTCA 61.444 66.667 26.68 0.00 0.00 3.27
105 106 3.134792 TCACGCCGGCTCTCTCTC 61.135 66.667 26.68 0.00 0.00 3.20
106 107 3.444805 GTCACGCCGGCTCTCTCT 61.445 66.667 26.68 0.00 0.00 3.10
107 108 4.838486 CGTCACGCCGGCTCTCTC 62.838 72.222 26.68 9.97 0.00 3.20
109 110 4.719369 AACGTCACGCCGGCTCTC 62.719 66.667 26.68 11.06 0.00 3.20
114 115 3.403057 CTGTCAACGTCACGCCGG 61.403 66.667 0.00 0.00 0.00 6.13
115 116 1.282248 ATTCTGTCAACGTCACGCCG 61.282 55.000 0.00 0.00 0.00 6.46
116 117 0.163788 CATTCTGTCAACGTCACGCC 59.836 55.000 0.00 0.00 0.00 5.68
117 118 0.163788 CCATTCTGTCAACGTCACGC 59.836 55.000 0.00 0.00 0.00 5.34
118 119 0.163788 GCCATTCTGTCAACGTCACG 59.836 55.000 0.00 0.00 0.00 4.35
119 120 1.195448 CTGCCATTCTGTCAACGTCAC 59.805 52.381 0.00 0.00 0.00 3.67
120 121 1.511850 CTGCCATTCTGTCAACGTCA 58.488 50.000 0.00 0.00 0.00 4.35
121 122 0.798776 CCTGCCATTCTGTCAACGTC 59.201 55.000 0.00 0.00 0.00 4.34
122 123 1.237285 GCCTGCCATTCTGTCAACGT 61.237 55.000 0.00 0.00 0.00 3.99
123 124 1.236616 TGCCTGCCATTCTGTCAACG 61.237 55.000 0.00 0.00 0.00 4.10
124 125 0.524862 CTGCCTGCCATTCTGTCAAC 59.475 55.000 0.00 0.00 0.00 3.18
125 126 0.609957 CCTGCCTGCCATTCTGTCAA 60.610 55.000 0.00 0.00 0.00 3.18
126 127 1.001764 CCTGCCTGCCATTCTGTCA 60.002 57.895 0.00 0.00 0.00 3.58
127 128 2.413142 GCCTGCCTGCCATTCTGTC 61.413 63.158 0.00 0.00 0.00 3.51
128 129 2.362120 GCCTGCCTGCCATTCTGT 60.362 61.111 0.00 0.00 0.00 3.41
129 130 1.756950 ATGCCTGCCTGCCATTCTG 60.757 57.895 0.00 0.00 0.00 3.02
130 131 1.756950 CATGCCTGCCTGCCATTCT 60.757 57.895 0.00 0.00 0.00 2.40
131 132 1.113517 ATCATGCCTGCCTGCCATTC 61.114 55.000 0.00 0.00 0.00 2.67
132 133 1.075525 ATCATGCCTGCCTGCCATT 60.076 52.632 0.00 0.00 0.00 3.16
133 134 1.530891 GATCATGCCTGCCTGCCAT 60.531 57.895 0.00 0.00 0.00 4.40
134 135 2.124024 GATCATGCCTGCCTGCCA 60.124 61.111 0.00 0.00 0.00 4.92
135 136 1.524863 GATGATCATGCCTGCCTGCC 61.525 60.000 14.30 0.00 0.00 4.85
136 137 1.853114 CGATGATCATGCCTGCCTGC 61.853 60.000 14.30 0.00 0.00 4.85
137 138 0.534427 ACGATGATCATGCCTGCCTG 60.534 55.000 14.30 0.00 0.00 4.85
138 139 0.250209 GACGATGATCATGCCTGCCT 60.250 55.000 14.30 0.00 0.00 4.75
139 140 0.250209 AGACGATGATCATGCCTGCC 60.250 55.000 14.30 0.00 0.00 4.85
140 141 1.146637 GAGACGATGATCATGCCTGC 58.853 55.000 14.30 0.00 0.00 4.85
141 142 1.793258 GGAGACGATGATCATGCCTG 58.207 55.000 14.30 2.69 0.00 4.85
161 162 0.240945 CCCATCAGTTTTCACGGCAC 59.759 55.000 0.00 0.00 0.00 5.01
162 163 0.109532 TCCCATCAGTTTTCACGGCA 59.890 50.000 0.00 0.00 0.00 5.69
163 164 0.804989 CTCCCATCAGTTTTCACGGC 59.195 55.000 0.00 0.00 0.00 5.68
164 165 0.804989 GCTCCCATCAGTTTTCACGG 59.195 55.000 0.00 0.00 0.00 4.94
165 166 1.466167 CTGCTCCCATCAGTTTTCACG 59.534 52.381 0.00 0.00 0.00 4.35
166 167 1.815003 CCTGCTCCCATCAGTTTTCAC 59.185 52.381 0.00 0.00 0.00 3.18
167 168 1.704628 TCCTGCTCCCATCAGTTTTCA 59.295 47.619 0.00 0.00 0.00 2.69
168 169 2.363683 CTCCTGCTCCCATCAGTTTTC 58.636 52.381 0.00 0.00 0.00 2.29
169 170 1.615384 GCTCCTGCTCCCATCAGTTTT 60.615 52.381 0.00 0.00 36.03 2.43
170 171 0.034670 GCTCCTGCTCCCATCAGTTT 60.035 55.000 0.00 0.00 36.03 2.66
171 172 1.606531 GCTCCTGCTCCCATCAGTT 59.393 57.895 0.00 0.00 36.03 3.16
172 173 3.318191 GCTCCTGCTCCCATCAGT 58.682 61.111 0.00 0.00 36.03 3.41
182 183 1.268079 GTTTTGGTCTCAAGCTCCTGC 59.732 52.381 0.00 0.00 40.05 4.85
183 184 2.551459 CTGTTTTGGTCTCAAGCTCCTG 59.449 50.000 0.00 0.00 33.98 3.86
184 185 2.856222 CTGTTTTGGTCTCAAGCTCCT 58.144 47.619 0.00 0.00 33.98 3.69
185 186 1.268079 GCTGTTTTGGTCTCAAGCTCC 59.732 52.381 0.00 0.00 33.98 4.70
186 187 1.268079 GGCTGTTTTGGTCTCAAGCTC 59.732 52.381 0.00 0.00 33.98 4.09
187 188 1.322442 GGCTGTTTTGGTCTCAAGCT 58.678 50.000 0.00 0.00 33.98 3.74
188 189 0.315251 GGGCTGTTTTGGTCTCAAGC 59.685 55.000 0.00 0.00 33.98 4.01
189 190 0.593128 CGGGCTGTTTTGGTCTCAAG 59.407 55.000 0.00 0.00 33.98 3.02
190 191 0.106918 ACGGGCTGTTTTGGTCTCAA 60.107 50.000 0.00 0.00 0.00 3.02
191 192 0.817634 CACGGGCTGTTTTGGTCTCA 60.818 55.000 0.00 0.00 0.00 3.27
192 193 0.818040 ACACGGGCTGTTTTGGTCTC 60.818 55.000 0.00 0.00 0.00 3.36
193 194 1.101049 CACACGGGCTGTTTTGGTCT 61.101 55.000 0.00 0.00 0.00 3.85
194 195 1.098712 TCACACGGGCTGTTTTGGTC 61.099 55.000 0.00 0.00 0.00 4.02
195 196 0.467290 ATCACACGGGCTGTTTTGGT 60.467 50.000 0.00 0.00 0.00 3.67
196 197 0.039256 CATCACACGGGCTGTTTTGG 60.039 55.000 0.00 0.00 0.00 3.28
197 198 0.950836 TCATCACACGGGCTGTTTTG 59.049 50.000 0.00 0.00 0.00 2.44
198 199 1.686355 TTCATCACACGGGCTGTTTT 58.314 45.000 0.00 0.00 0.00 2.43
199 200 1.336755 GTTTCATCACACGGGCTGTTT 59.663 47.619 0.00 0.00 0.00 2.83
200 201 0.951558 GTTTCATCACACGGGCTGTT 59.048 50.000 0.00 0.00 0.00 3.16
201 202 0.889186 GGTTTCATCACACGGGCTGT 60.889 55.000 0.00 0.00 0.00 4.40
202 203 1.875963 GGTTTCATCACACGGGCTG 59.124 57.895 0.00 0.00 0.00 4.85
203 204 1.671054 CGGTTTCATCACACGGGCT 60.671 57.895 0.00 0.00 0.00 5.19
204 205 2.867472 CGGTTTCATCACACGGGC 59.133 61.111 0.00 0.00 0.00 6.13
205 206 1.511318 TTGCGGTTTCATCACACGGG 61.511 55.000 0.00 0.00 0.00 5.28
206 207 0.521291 ATTGCGGTTTCATCACACGG 59.479 50.000 0.00 0.00 0.00 4.94
207 208 1.196581 TCATTGCGGTTTCATCACACG 59.803 47.619 0.00 0.00 0.00 4.49
208 209 2.987413 TCATTGCGGTTTCATCACAC 57.013 45.000 0.00 0.00 0.00 3.82
209 210 3.080319 TGATCATTGCGGTTTCATCACA 58.920 40.909 0.00 0.00 0.00 3.58
210 211 3.763097 TGATCATTGCGGTTTCATCAC 57.237 42.857 0.00 0.00 0.00 3.06
211 212 4.201657 AGATGATCATTGCGGTTTCATCA 58.798 39.130 10.14 3.35 43.19 3.07
212 213 4.825546 AGATGATCATTGCGGTTTCATC 57.174 40.909 10.14 0.00 41.81 2.92
213 214 4.202080 CCAAGATGATCATTGCGGTTTCAT 60.202 41.667 10.14 0.00 0.00 2.57
214 215 3.129113 CCAAGATGATCATTGCGGTTTCA 59.871 43.478 10.14 0.00 0.00 2.69
215 216 3.129287 ACCAAGATGATCATTGCGGTTTC 59.871 43.478 10.14 0.00 0.00 2.78
216 217 3.091545 ACCAAGATGATCATTGCGGTTT 58.908 40.909 10.14 0.00 0.00 3.27
217 218 2.684881 GACCAAGATGATCATTGCGGTT 59.315 45.455 19.16 8.30 0.00 4.44
218 219 2.292267 GACCAAGATGATCATTGCGGT 58.708 47.619 18.55 18.55 0.00 5.68
219 220 1.262417 CGACCAAGATGATCATTGCGG 59.738 52.381 10.14 12.37 0.00 5.69
220 221 1.935873 ACGACCAAGATGATCATTGCG 59.064 47.619 10.14 8.30 0.00 4.85
221 222 3.201290 AGACGACCAAGATGATCATTGC 58.799 45.455 10.14 0.00 0.00 3.56
222 223 4.034858 CCAAGACGACCAAGATGATCATTG 59.965 45.833 10.14 5.86 0.00 2.82
223 224 4.194640 CCAAGACGACCAAGATGATCATT 58.805 43.478 10.14 0.00 0.00 2.57
224 225 3.198635 ACCAAGACGACCAAGATGATCAT 59.801 43.478 8.25 8.25 0.00 2.45
225 226 2.567169 ACCAAGACGACCAAGATGATCA 59.433 45.455 0.00 0.00 0.00 2.92
226 227 3.190874 GACCAAGACGACCAAGATGATC 58.809 50.000 0.00 0.00 0.00 2.92
227 228 2.417379 CGACCAAGACGACCAAGATGAT 60.417 50.000 0.00 0.00 0.00 2.45
228 229 1.067846 CGACCAAGACGACCAAGATGA 60.068 52.381 0.00 0.00 0.00 2.92
229 230 1.350193 CGACCAAGACGACCAAGATG 58.650 55.000 0.00 0.00 0.00 2.90
230 231 0.389948 GCGACCAAGACGACCAAGAT 60.390 55.000 0.00 0.00 0.00 2.40
231 232 1.006571 GCGACCAAGACGACCAAGA 60.007 57.895 0.00 0.00 0.00 3.02
232 233 1.006102 AGCGACCAAGACGACCAAG 60.006 57.895 0.00 0.00 0.00 3.61
233 234 1.006571 GAGCGACCAAGACGACCAA 60.007 57.895 0.00 0.00 0.00 3.67
234 235 2.142357 CTGAGCGACCAAGACGACCA 62.142 60.000 0.00 0.00 0.00 4.02
235 236 1.444553 CTGAGCGACCAAGACGACC 60.445 63.158 0.00 0.00 0.00 4.79
236 237 2.089349 GCTGAGCGACCAAGACGAC 61.089 63.158 0.00 0.00 0.00 4.34
237 238 2.201436 GAGCTGAGCGACCAAGACGA 62.201 60.000 0.00 0.00 0.00 4.20
238 239 1.803519 GAGCTGAGCGACCAAGACG 60.804 63.158 0.00 0.00 0.00 4.18
239 240 1.446966 GGAGCTGAGCGACCAAGAC 60.447 63.158 16.14 0.00 32.47 3.01
240 241 1.607756 AGGAGCTGAGCGACCAAGA 60.608 57.895 21.14 0.00 33.94 3.02
241 242 1.447489 CAGGAGCTGAGCGACCAAG 60.447 63.158 21.14 12.00 32.44 3.61
242 243 1.260538 ATCAGGAGCTGAGCGACCAA 61.261 55.000 21.14 11.86 44.08 3.67
243 244 1.260538 AATCAGGAGCTGAGCGACCA 61.261 55.000 21.14 6.40 44.08 4.02
244 245 0.529555 GAATCAGGAGCTGAGCGACC 60.530 60.000 13.94 13.94 44.08 4.79
245 246 0.459489 AGAATCAGGAGCTGAGCGAC 59.541 55.000 0.00 0.00 44.08 5.19
246 247 0.459078 CAGAATCAGGAGCTGAGCGA 59.541 55.000 0.00 0.00 44.08 4.93
247 248 0.459078 TCAGAATCAGGAGCTGAGCG 59.541 55.000 0.00 0.00 44.08 5.03
248 249 2.914695 ATCAGAATCAGGAGCTGAGC 57.085 50.000 0.00 0.00 44.08 4.26
249 250 3.382855 CGAATCAGAATCAGGAGCTGAG 58.617 50.000 0.00 0.00 44.08 3.35
250 251 2.102084 CCGAATCAGAATCAGGAGCTGA 59.898 50.000 0.00 0.00 44.99 4.26
251 252 2.158986 ACCGAATCAGAATCAGGAGCTG 60.159 50.000 0.00 0.00 0.00 4.24
252 253 2.114616 ACCGAATCAGAATCAGGAGCT 58.885 47.619 0.00 0.00 0.00 4.09
253 254 2.208431 CACCGAATCAGAATCAGGAGC 58.792 52.381 4.07 0.00 0.00 4.70
254 255 3.452474 GACACCGAATCAGAATCAGGAG 58.548 50.000 4.07 0.00 0.00 3.69
255 256 2.159240 CGACACCGAATCAGAATCAGGA 60.159 50.000 4.07 0.00 38.22 3.86
256 257 2.196749 CGACACCGAATCAGAATCAGG 58.803 52.381 0.00 0.00 38.22 3.86
257 258 2.600420 CACGACACCGAATCAGAATCAG 59.400 50.000 0.00 0.00 39.50 2.90
258 259 2.230266 TCACGACACCGAATCAGAATCA 59.770 45.455 0.00 0.00 39.50 2.57
259 260 2.599082 GTCACGACACCGAATCAGAATC 59.401 50.000 0.00 0.00 39.50 2.52
260 261 2.231478 AGTCACGACACCGAATCAGAAT 59.769 45.455 0.00 0.00 39.50 2.40
261 262 1.611977 AGTCACGACACCGAATCAGAA 59.388 47.619 0.00 0.00 39.50 3.02
262 263 1.199327 GAGTCACGACACCGAATCAGA 59.801 52.381 0.00 0.00 39.50 3.27
263 264 1.618861 GAGTCACGACACCGAATCAG 58.381 55.000 0.00 0.00 39.50 2.90
264 265 0.109919 CGAGTCACGACACCGAATCA 60.110 55.000 0.00 0.00 45.77 2.57
265 266 0.109873 ACGAGTCACGACACCGAATC 60.110 55.000 15.52 0.00 45.77 2.52
266 267 0.386858 CACGAGTCACGACACCGAAT 60.387 55.000 15.52 0.00 45.77 3.34
267 268 1.009335 CACGAGTCACGACACCGAA 60.009 57.895 15.52 0.00 45.77 4.30
268 269 1.838568 CTCACGAGTCACGACACCGA 61.839 60.000 15.52 1.66 45.77 4.69
269 270 1.440518 CTCACGAGTCACGACACCG 60.441 63.158 0.00 5.36 45.77 4.94
270 271 1.081376 CCTCACGAGTCACGACACC 60.081 63.158 0.00 0.00 45.77 4.16
271 272 1.081376 CCCTCACGAGTCACGACAC 60.081 63.158 0.00 0.00 45.77 3.67
272 273 1.228033 TCCCTCACGAGTCACGACA 60.228 57.895 0.00 0.00 45.77 4.35
273 274 1.209640 GTCCCTCACGAGTCACGAC 59.790 63.158 0.00 0.00 45.77 4.34
274 275 3.664495 GTCCCTCACGAGTCACGA 58.336 61.111 0.00 0.00 45.77 4.35
283 284 2.737376 GCGTGAACCGTCCCTCAC 60.737 66.667 0.00 0.00 38.87 3.51
284 285 3.228017 TGCGTGAACCGTCCCTCA 61.228 61.111 0.00 0.00 39.32 3.86
285 286 2.737376 GTGCGTGAACCGTCCCTC 60.737 66.667 0.00 0.00 39.32 4.30
286 287 4.657824 CGTGCGTGAACCGTCCCT 62.658 66.667 0.00 0.00 39.32 4.20
289 290 4.349871 GTGCGTGCGTGAACCGTC 62.350 66.667 0.00 0.00 39.32 4.79
311 312 4.166011 CTACTGCTTTGCCCGCGC 62.166 66.667 0.00 0.00 0.00 6.86
312 313 4.166011 GCTACTGCTTTGCCCGCG 62.166 66.667 0.00 0.00 36.03 6.46
313 314 2.141122 TTTGCTACTGCTTTGCCCGC 62.141 55.000 0.00 0.00 40.48 6.13
314 315 0.313672 TTTTGCTACTGCTTTGCCCG 59.686 50.000 0.00 0.00 40.48 6.13
315 316 1.605457 GGTTTTGCTACTGCTTTGCCC 60.605 52.381 0.00 0.00 40.48 5.36
316 317 1.068434 TGGTTTTGCTACTGCTTTGCC 59.932 47.619 0.00 0.00 40.48 4.52
317 318 2.127251 GTGGTTTTGCTACTGCTTTGC 58.873 47.619 0.00 0.00 40.48 3.68
318 319 2.384382 CGTGGTTTTGCTACTGCTTTG 58.616 47.619 0.00 0.00 40.48 2.77
319 320 1.336755 CCGTGGTTTTGCTACTGCTTT 59.663 47.619 0.00 0.00 40.48 3.51
320 321 0.951558 CCGTGGTTTTGCTACTGCTT 59.048 50.000 0.00 0.00 40.48 3.91
321 322 1.515521 GCCGTGGTTTTGCTACTGCT 61.516 55.000 0.00 0.00 36.26 4.24
322 323 1.081442 GCCGTGGTTTTGCTACTGC 60.081 57.895 0.00 0.00 40.20 4.40
323 324 0.238289 CTGCCGTGGTTTTGCTACTG 59.762 55.000 0.00 0.00 0.00 2.74
324 325 0.889186 CCTGCCGTGGTTTTGCTACT 60.889 55.000 0.00 0.00 0.00 2.57
325 326 1.579429 CCTGCCGTGGTTTTGCTAC 59.421 57.895 0.00 0.00 0.00 3.58
326 327 2.265182 GCCTGCCGTGGTTTTGCTA 61.265 57.895 0.00 0.00 0.00 3.49
327 328 3.605664 GCCTGCCGTGGTTTTGCT 61.606 61.111 0.00 0.00 0.00 3.91
328 329 3.910490 TGCCTGCCGTGGTTTTGC 61.910 61.111 0.00 0.00 0.00 3.68
329 330 2.027460 GTGCCTGCCGTGGTTTTG 59.973 61.111 0.00 0.00 0.00 2.44
330 331 2.441164 TGTGCCTGCCGTGGTTTT 60.441 55.556 0.00 0.00 0.00 2.43
331 332 2.906897 CTGTGCCTGCCGTGGTTT 60.907 61.111 0.00 0.00 0.00 3.27
332 333 4.189580 ACTGTGCCTGCCGTGGTT 62.190 61.111 0.00 0.00 0.00 3.67
333 334 4.935495 CACTGTGCCTGCCGTGGT 62.935 66.667 0.00 0.00 0.00 4.16
334 335 4.624364 TCACTGTGCCTGCCGTGG 62.624 66.667 2.12 0.00 0.00 4.94
335 336 3.046087 CTCACTGTGCCTGCCGTG 61.046 66.667 2.12 0.00 0.00 4.94
336 337 4.320456 CCTCACTGTGCCTGCCGT 62.320 66.667 2.12 0.00 0.00 5.68
338 339 2.490270 ATTCCCTCACTGTGCCTGCC 62.490 60.000 2.12 0.00 0.00 4.85
339 340 1.001641 ATTCCCTCACTGTGCCTGC 60.002 57.895 2.12 0.00 0.00 4.85
340 341 0.617413 AGATTCCCTCACTGTGCCTG 59.383 55.000 2.12 0.00 0.00 4.85
341 342 1.366319 AAGATTCCCTCACTGTGCCT 58.634 50.000 2.12 0.00 0.00 4.75
342 343 2.206576 AAAGATTCCCTCACTGTGCC 57.793 50.000 2.12 0.00 0.00 5.01
343 344 3.823304 AGAAAAAGATTCCCTCACTGTGC 59.177 43.478 2.12 0.00 0.00 4.57
344 345 5.312079 AGAGAAAAAGATTCCCTCACTGTG 58.688 41.667 0.17 0.17 0.00 3.66
345 346 5.309282 AGAGAGAAAAAGATTCCCTCACTGT 59.691 40.000 3.15 0.00 0.00 3.55
346 347 5.803552 AGAGAGAAAAAGATTCCCTCACTG 58.196 41.667 3.15 0.00 0.00 3.66
347 348 6.183361 ACAAGAGAGAAAAAGATTCCCTCACT 60.183 38.462 3.15 0.00 0.00 3.41
348 349 6.000840 ACAAGAGAGAAAAAGATTCCCTCAC 58.999 40.000 3.15 0.00 0.00 3.51
349 350 6.192970 ACAAGAGAGAAAAAGATTCCCTCA 57.807 37.500 3.15 0.00 0.00 3.86
350 351 5.350091 CGACAAGAGAGAAAAAGATTCCCTC 59.650 44.000 0.00 0.00 0.00 4.30
351 352 5.241662 CGACAAGAGAGAAAAAGATTCCCT 58.758 41.667 0.00 0.00 0.00 4.20
352 353 4.142795 GCGACAAGAGAGAAAAAGATTCCC 60.143 45.833 0.00 0.00 0.00 3.97
353 354 4.434857 CGCGACAAGAGAGAAAAAGATTCC 60.435 45.833 0.00 0.00 0.00 3.01
354 355 4.434857 CCGCGACAAGAGAGAAAAAGATTC 60.435 45.833 8.23 0.00 0.00 2.52
355 356 3.433615 CCGCGACAAGAGAGAAAAAGATT 59.566 43.478 8.23 0.00 0.00 2.40
356 357 2.996621 CCGCGACAAGAGAGAAAAAGAT 59.003 45.455 8.23 0.00 0.00 2.40
357 358 2.223971 ACCGCGACAAGAGAGAAAAAGA 60.224 45.455 8.23 0.00 0.00 2.52
358 359 2.135933 ACCGCGACAAGAGAGAAAAAG 58.864 47.619 8.23 0.00 0.00 2.27
359 360 2.234300 ACCGCGACAAGAGAGAAAAA 57.766 45.000 8.23 0.00 0.00 1.94
360 361 1.864711 CAACCGCGACAAGAGAGAAAA 59.135 47.619 8.23 0.00 0.00 2.29
361 362 1.497991 CAACCGCGACAAGAGAGAAA 58.502 50.000 8.23 0.00 0.00 2.52
362 363 0.944311 GCAACCGCGACAAGAGAGAA 60.944 55.000 8.23 0.00 0.00 2.87
363 364 1.372997 GCAACCGCGACAAGAGAGA 60.373 57.895 8.23 0.00 0.00 3.10
364 365 2.383527 GGCAACCGCGACAAGAGAG 61.384 63.158 8.23 0.00 39.92 3.20
365 366 2.357034 GGCAACCGCGACAAGAGA 60.357 61.111 8.23 0.00 39.92 3.10
366 367 2.664851 TGGCAACCGCGACAAGAG 60.665 61.111 8.23 0.00 39.92 2.85
367 368 2.664851 CTGGCAACCGCGACAAGA 60.665 61.111 8.23 0.00 39.92 3.02
368 369 4.389576 GCTGGCAACCGCGACAAG 62.390 66.667 8.23 0.00 39.92 3.16
376 377 4.338710 TACCCGTGGCTGGCAACC 62.339 66.667 5.14 0.00 0.00 3.77
377 378 3.053896 GTACCCGTGGCTGGCAAC 61.054 66.667 5.14 0.00 0.00 4.17
378 379 4.690719 CGTACCCGTGGCTGGCAA 62.691 66.667 5.14 0.00 0.00 4.52
381 382 4.446413 GTCCGTACCCGTGGCTGG 62.446 72.222 0.00 0.00 0.00 4.85
382 383 1.389609 ATAGTCCGTACCCGTGGCTG 61.390 60.000 0.00 0.00 0.00 4.85
383 384 1.076485 ATAGTCCGTACCCGTGGCT 60.076 57.895 0.00 0.00 0.00 4.75
384 385 1.066918 CATAGTCCGTACCCGTGGC 59.933 63.158 0.00 0.00 0.00 5.01
385 386 0.752743 TCCATAGTCCGTACCCGTGG 60.753 60.000 0.00 0.00 0.00 4.94
386 387 0.666913 CTCCATAGTCCGTACCCGTG 59.333 60.000 0.00 0.00 0.00 4.94
387 388 0.548031 TCTCCATAGTCCGTACCCGT 59.452 55.000 0.00 0.00 0.00 5.28
388 389 1.202734 TCTCTCCATAGTCCGTACCCG 60.203 57.143 0.00 0.00 0.00 5.28
389 390 2.653234 TCTCTCCATAGTCCGTACCC 57.347 55.000 0.00 0.00 0.00 3.69
390 391 2.820787 CCATCTCTCCATAGTCCGTACC 59.179 54.545 0.00 0.00 0.00 3.34
391 392 3.752665 TCCATCTCTCCATAGTCCGTAC 58.247 50.000 0.00 0.00 0.00 3.67
392 393 3.811098 GCTCCATCTCTCCATAGTCCGTA 60.811 52.174 0.00 0.00 0.00 4.02
393 394 2.870175 CTCCATCTCTCCATAGTCCGT 58.130 52.381 0.00 0.00 0.00 4.69
394 395 1.543802 GCTCCATCTCTCCATAGTCCG 59.456 57.143 0.00 0.00 0.00 4.79
395 396 2.603021 TGCTCCATCTCTCCATAGTCC 58.397 52.381 0.00 0.00 0.00 3.85
396 397 3.554752 GCTTGCTCCATCTCTCCATAGTC 60.555 52.174 0.00 0.00 0.00 2.59
397 398 2.368221 GCTTGCTCCATCTCTCCATAGT 59.632 50.000 0.00 0.00 0.00 2.12
398 399 2.609984 CGCTTGCTCCATCTCTCCATAG 60.610 54.545 0.00 0.00 0.00 2.23
399 400 1.342496 CGCTTGCTCCATCTCTCCATA 59.658 52.381 0.00 0.00 0.00 2.74
400 401 0.106335 CGCTTGCTCCATCTCTCCAT 59.894 55.000 0.00 0.00 0.00 3.41
401 402 0.972471 TCGCTTGCTCCATCTCTCCA 60.972 55.000 0.00 0.00 0.00 3.86
402 403 0.529555 GTCGCTTGCTCCATCTCTCC 60.530 60.000 0.00 0.00 0.00 3.71
403 404 0.869454 CGTCGCTTGCTCCATCTCTC 60.869 60.000 0.00 0.00 0.00 3.20
404 405 1.140589 CGTCGCTTGCTCCATCTCT 59.859 57.895 0.00 0.00 0.00 3.10
405 406 2.520904 GCGTCGCTTGCTCCATCTC 61.521 63.158 10.68 0.00 0.00 2.75
406 407 2.510238 GCGTCGCTTGCTCCATCT 60.510 61.111 10.68 0.00 0.00 2.90
407 408 2.301902 CTTGCGTCGCTTGCTCCATC 62.302 60.000 19.50 0.00 0.00 3.51
408 409 2.358615 TTGCGTCGCTTGCTCCAT 60.359 55.556 19.50 0.00 0.00 3.41
409 410 3.043713 CTTGCGTCGCTTGCTCCA 61.044 61.111 19.50 0.00 0.00 3.86
410 411 4.451652 GCTTGCGTCGCTTGCTCC 62.452 66.667 19.50 0.00 0.00 4.70
411 412 3.642008 CTGCTTGCGTCGCTTGCTC 62.642 63.158 25.98 10.91 0.00 4.26
412 413 3.720193 CTGCTTGCGTCGCTTGCT 61.720 61.111 25.98 0.00 0.00 3.91
422 423 2.669569 TTCCCGTGAGCTGCTTGC 60.670 61.111 2.53 0.00 43.29 4.01
423 424 2.671177 CGTTCCCGTGAGCTGCTTG 61.671 63.158 2.53 0.00 0.00 4.01
424 425 2.357517 CGTTCCCGTGAGCTGCTT 60.358 61.111 2.53 0.00 0.00 3.91
425 426 4.379243 CCGTTCCCGTGAGCTGCT 62.379 66.667 0.00 0.00 0.00 4.24
427 428 3.649277 CTCCCGTTCCCGTGAGCTG 62.649 68.421 0.00 0.00 31.98 4.24
428 429 3.382832 CTCCCGTTCCCGTGAGCT 61.383 66.667 0.00 0.00 31.98 4.09
429 430 4.452733 CCTCCCGTTCCCGTGAGC 62.453 72.222 0.00 0.00 37.27 4.26
430 431 3.771160 CCCTCCCGTTCCCGTGAG 61.771 72.222 0.00 0.00 38.18 3.51
435 436 3.640257 GAAAGCCCCTCCCGTTCCC 62.640 68.421 0.00 0.00 0.00 3.97
436 437 2.045242 GAAAGCCCCTCCCGTTCC 60.045 66.667 0.00 0.00 0.00 3.62
437 438 2.436115 CGAAAGCCCCTCCCGTTC 60.436 66.667 0.00 0.00 0.00 3.95
438 439 3.246880 ACGAAAGCCCCTCCCGTT 61.247 61.111 0.00 0.00 0.00 4.44
439 440 3.703127 GACGAAAGCCCCTCCCGT 61.703 66.667 0.00 0.00 36.08 5.28
440 441 4.814294 CGACGAAAGCCCCTCCCG 62.814 72.222 0.00 0.00 0.00 5.14
441 442 4.468689 CCGACGAAAGCCCCTCCC 62.469 72.222 0.00 0.00 0.00 4.30
442 443 3.703127 ACCGACGAAAGCCCCTCC 61.703 66.667 0.00 0.00 0.00 4.30
443 444 2.434359 CACCGACGAAAGCCCCTC 60.434 66.667 0.00 0.00 0.00 4.30
444 445 4.699522 GCACCGACGAAAGCCCCT 62.700 66.667 0.00 0.00 0.00 4.79
445 446 4.699522 AGCACCGACGAAAGCCCC 62.700 66.667 0.00 0.00 0.00 5.80
446 447 3.119096 GAGCACCGACGAAAGCCC 61.119 66.667 0.00 0.00 0.00 5.19
447 448 3.119096 GGAGCACCGACGAAAGCC 61.119 66.667 0.00 0.00 0.00 4.35
457 458 1.966451 CCAAGTTGGACGGAGCACC 60.966 63.158 17.60 0.00 40.96 5.01
458 459 2.617274 GCCAAGTTGGACGGAGCAC 61.617 63.158 26.52 0.87 40.96 4.40
459 460 2.281484 GCCAAGTTGGACGGAGCA 60.281 61.111 26.52 0.00 40.96 4.26
460 461 3.423154 CGCCAAGTTGGACGGAGC 61.423 66.667 26.52 7.75 40.96 4.70
461 462 2.030562 ACGCCAAGTTGGACGGAG 59.969 61.111 29.43 16.90 40.96 4.63
462 463 2.280524 CACGCCAAGTTGGACGGA 60.281 61.111 29.43 0.00 40.96 4.69
463 464 3.353836 CCACGCCAAGTTGGACGG 61.354 66.667 29.43 20.70 40.96 4.79
464 465 4.025401 GCCACGCCAAGTTGGACG 62.025 66.667 26.52 26.57 40.96 4.79
465 466 4.025401 CGCCACGCCAAGTTGGAC 62.025 66.667 26.52 15.20 40.96 4.02
466 467 4.555709 ACGCCACGCCAAGTTGGA 62.556 61.111 26.52 0.00 40.96 3.53
467 468 4.326766 CACGCCACGCCAAGTTGG 62.327 66.667 18.17 18.17 41.55 3.77
468 469 4.980903 GCACGCCACGCCAAGTTG 62.981 66.667 0.00 0.00 0.00 3.16
485 486 1.586154 AAAATTCTGGCTCGCACGGG 61.586 55.000 0.00 0.00 0.00 5.28
486 487 0.179189 GAAAATTCTGGCTCGCACGG 60.179 55.000 0.00 0.00 0.00 4.94
487 488 0.179189 GGAAAATTCTGGCTCGCACG 60.179 55.000 0.00 0.00 0.00 5.34
488 489 0.179189 CGGAAAATTCTGGCTCGCAC 60.179 55.000 0.00 0.00 0.00 5.34
489 490 0.321210 TCGGAAAATTCTGGCTCGCA 60.321 50.000 2.32 0.00 34.32 5.10
490 491 1.017387 ATCGGAAAATTCTGGCTCGC 58.983 50.000 2.32 0.00 34.32 5.03
491 492 2.677836 TCAATCGGAAAATTCTGGCTCG 59.322 45.455 2.32 0.00 34.32 5.03
492 493 3.485877 CGTCAATCGGAAAATTCTGGCTC 60.486 47.826 2.32 0.00 34.32 4.70
493 494 2.420022 CGTCAATCGGAAAATTCTGGCT 59.580 45.455 2.32 0.00 34.32 4.75
494 495 2.785679 CGTCAATCGGAAAATTCTGGC 58.214 47.619 2.32 0.00 34.32 4.85
517 518 1.583054 AAGAGCAGAACAACGGTGAC 58.417 50.000 7.88 0.00 0.00 3.67
518 519 2.210116 GAAAGAGCAGAACAACGGTGA 58.790 47.619 7.88 0.00 0.00 4.02
519 520 1.264288 GGAAAGAGCAGAACAACGGTG 59.736 52.381 0.00 0.00 0.00 4.94
520 521 1.594331 GGAAAGAGCAGAACAACGGT 58.406 50.000 0.00 0.00 0.00 4.83
521 522 0.875059 GGGAAAGAGCAGAACAACGG 59.125 55.000 0.00 0.00 0.00 4.44
522 523 1.884235 AGGGAAAGAGCAGAACAACG 58.116 50.000 0.00 0.00 0.00 4.10
523 524 3.632145 TCAAAGGGAAAGAGCAGAACAAC 59.368 43.478 0.00 0.00 0.00 3.32
524 525 3.897239 TCAAAGGGAAAGAGCAGAACAA 58.103 40.909 0.00 0.00 0.00 2.83
525 526 3.576078 TCAAAGGGAAAGAGCAGAACA 57.424 42.857 0.00 0.00 0.00 3.18
526 527 4.074970 TCATCAAAGGGAAAGAGCAGAAC 58.925 43.478 0.00 0.00 0.00 3.01
527 528 4.371624 TCATCAAAGGGAAAGAGCAGAA 57.628 40.909 0.00 0.00 0.00 3.02
528 529 4.019051 TCATCATCAAAGGGAAAGAGCAGA 60.019 41.667 0.00 0.00 0.00 4.26
529 530 4.267536 TCATCATCAAAGGGAAAGAGCAG 58.732 43.478 0.00 0.00 0.00 4.24
530 531 4.305539 TCATCATCAAAGGGAAAGAGCA 57.694 40.909 0.00 0.00 0.00 4.26
531 532 4.885907 TCATCATCATCAAAGGGAAAGAGC 59.114 41.667 0.00 0.00 0.00 4.09
532 533 6.771267 TCATCATCATCATCAAAGGGAAAGAG 59.229 38.462 0.00 0.00 0.00 2.85
533 534 6.665695 TCATCATCATCATCAAAGGGAAAGA 58.334 36.000 0.00 0.00 0.00 2.52
534 535 6.771267 TCTCATCATCATCATCAAAGGGAAAG 59.229 38.462 0.00 0.00 0.00 2.62
535 536 6.665695 TCTCATCATCATCATCAAAGGGAAA 58.334 36.000 0.00 0.00 0.00 3.13
536 537 6.256643 TCTCATCATCATCATCAAAGGGAA 57.743 37.500 0.00 0.00 0.00 3.97
537 538 5.899631 TCTCATCATCATCATCAAAGGGA 57.100 39.130 0.00 0.00 0.00 4.20
538 539 6.238648 TCATCTCATCATCATCATCAAAGGG 58.761 40.000 0.00 0.00 0.00 3.95
539 540 7.118535 GTCTCATCTCATCATCATCATCAAAGG 59.881 40.741 0.00 0.00 0.00 3.11
540 541 7.148722 CGTCTCATCTCATCATCATCATCAAAG 60.149 40.741 0.00 0.00 0.00 2.77
541 542 6.645415 CGTCTCATCTCATCATCATCATCAAA 59.355 38.462 0.00 0.00 0.00 2.69
542 543 6.015688 TCGTCTCATCTCATCATCATCATCAA 60.016 38.462 0.00 0.00 0.00 2.57
543 544 5.475909 TCGTCTCATCTCATCATCATCATCA 59.524 40.000 0.00 0.00 0.00 3.07
544 545 5.952033 TCGTCTCATCTCATCATCATCATC 58.048 41.667 0.00 0.00 0.00 2.92
545 546 5.622687 GCTCGTCTCATCTCATCATCATCAT 60.623 44.000 0.00 0.00 0.00 2.45
546 547 4.321082 GCTCGTCTCATCTCATCATCATCA 60.321 45.833 0.00 0.00 0.00 3.07
547 548 4.168014 GCTCGTCTCATCTCATCATCATC 58.832 47.826 0.00 0.00 0.00 2.92
548 549 3.573110 TGCTCGTCTCATCTCATCATCAT 59.427 43.478 0.00 0.00 0.00 2.45
549 550 2.954318 TGCTCGTCTCATCTCATCATCA 59.046 45.455 0.00 0.00 0.00 3.07
550 551 3.252944 TCTGCTCGTCTCATCTCATCATC 59.747 47.826 0.00 0.00 0.00 2.92
551 552 3.220940 TCTGCTCGTCTCATCTCATCAT 58.779 45.455 0.00 0.00 0.00 2.45
552 553 2.617774 CTCTGCTCGTCTCATCTCATCA 59.382 50.000 0.00 0.00 0.00 3.07
553 554 2.605338 GCTCTGCTCGTCTCATCTCATC 60.605 54.545 0.00 0.00 0.00 2.92
554 555 1.337703 GCTCTGCTCGTCTCATCTCAT 59.662 52.381 0.00 0.00 0.00 2.90
555 556 0.737804 GCTCTGCTCGTCTCATCTCA 59.262 55.000 0.00 0.00 0.00 3.27
556 557 0.316937 CGCTCTGCTCGTCTCATCTC 60.317 60.000 0.00 0.00 0.00 2.75
557 558 1.723608 CCGCTCTGCTCGTCTCATCT 61.724 60.000 0.00 0.00 0.00 2.90
558 559 1.299014 CCGCTCTGCTCGTCTCATC 60.299 63.158 0.00 0.00 0.00 2.92
559 560 1.599606 AACCGCTCTGCTCGTCTCAT 61.600 55.000 0.00 0.00 0.00 2.90
560 561 2.201436 GAACCGCTCTGCTCGTCTCA 62.201 60.000 0.00 0.00 0.00 3.27
561 562 1.515304 GAACCGCTCTGCTCGTCTC 60.515 63.158 0.00 0.00 0.00 3.36
562 563 2.569134 GAACCGCTCTGCTCGTCT 59.431 61.111 0.00 0.00 0.00 4.18
563 564 2.507324 GGAACCGCTCTGCTCGTC 60.507 66.667 0.00 0.00 0.00 4.20
564 565 4.421479 CGGAACCGCTCTGCTCGT 62.421 66.667 0.00 0.00 0.00 4.18
565 566 4.421479 ACGGAACCGCTCTGCTCG 62.421 66.667 13.32 0.00 44.19 5.03
566 567 1.654954 TAGACGGAACCGCTCTGCTC 61.655 60.000 19.91 8.95 44.19 4.26
567 568 1.677966 TAGACGGAACCGCTCTGCT 60.678 57.895 19.91 11.07 44.19 4.24
568 569 1.516603 GTAGACGGAACCGCTCTGC 60.517 63.158 19.91 16.81 44.19 4.26
569 570 1.226323 CGTAGACGGAACCGCTCTG 60.226 63.158 19.91 9.74 44.19 3.35
570 571 0.391661 TACGTAGACGGAACCGCTCT 60.392 55.000 13.32 15.66 44.95 4.09
571 572 0.247854 GTACGTAGACGGAACCGCTC 60.248 60.000 13.32 9.82 44.95 5.03
572 573 1.796796 GTACGTAGACGGAACCGCT 59.203 57.895 13.32 12.95 44.95 5.52
573 574 1.581147 CGTACGTAGACGGAACCGC 60.581 63.158 13.32 6.39 44.95 5.68
574 575 4.651317 CGTACGTAGACGGAACCG 57.349 61.111 7.22 11.83 44.95 4.44
575 576 4.413336 CCGTACGTACGTAGACGGAACC 62.413 59.091 40.05 21.93 46.99 3.62
576 577 1.266891 CCGTACGTACGTAGACGGAAC 60.267 57.143 40.05 24.78 46.99 3.62
577 578 0.996462 CCGTACGTACGTAGACGGAA 59.004 55.000 40.05 17.06 46.99 4.30
578 579 1.418342 GCCGTACGTACGTAGACGGA 61.418 60.000 43.78 21.29 46.99 4.69
579 580 1.012234 GCCGTACGTACGTAGACGG 60.012 63.158 39.18 39.18 46.84 4.79
597 598 4.933064 GAGATCAGGTCGGCCGCG 62.933 72.222 23.51 8.93 40.50 6.46
598 599 3.838271 TGAGATCAGGTCGGCCGC 61.838 66.667 23.51 16.04 40.50 6.53
599 600 2.105128 GTGAGATCAGGTCGGCCG 59.895 66.667 22.12 22.12 40.50 6.13
600 601 2.501610 GGTGAGATCAGGTCGGCC 59.498 66.667 0.00 0.00 0.00 6.13
601 602 2.501610 GGGTGAGATCAGGTCGGC 59.498 66.667 0.00 0.00 0.00 5.54
602 603 1.753078 TCGGGTGAGATCAGGTCGG 60.753 63.158 0.00 0.00 0.00 4.79
603 604 1.433879 GTCGGGTGAGATCAGGTCG 59.566 63.158 0.00 0.00 0.00 4.79
604 605 1.817209 GGTCGGGTGAGATCAGGTC 59.183 63.158 0.00 0.00 0.00 3.85
605 606 2.052690 CGGTCGGGTGAGATCAGGT 61.053 63.158 0.00 0.00 0.00 4.00
606 607 2.808315 CGGTCGGGTGAGATCAGG 59.192 66.667 0.00 0.00 0.00 3.86
607 608 2.105128 GCGGTCGGGTGAGATCAG 59.895 66.667 0.00 0.00 0.00 2.90
608 609 3.822192 CGCGGTCGGGTGAGATCA 61.822 66.667 0.00 0.00 0.00 2.92
632 633 3.488090 GTTTTCGGCTCGGCTCGG 61.488 66.667 0.00 0.00 0.00 4.63
633 634 3.488090 GGTTTTCGGCTCGGCTCG 61.488 66.667 0.00 0.00 0.00 5.03
634 635 3.125573 GGGTTTTCGGCTCGGCTC 61.126 66.667 0.00 0.00 0.00 4.70
635 636 3.901797 CTGGGTTTTCGGCTCGGCT 62.902 63.158 0.00 0.00 0.00 5.52
636 637 3.431725 CTGGGTTTTCGGCTCGGC 61.432 66.667 0.00 0.00 0.00 5.54
637 638 2.746277 CCTGGGTTTTCGGCTCGG 60.746 66.667 0.00 0.00 0.00 4.63
638 639 2.033194 GTCCTGGGTTTTCGGCTCG 61.033 63.158 0.00 0.00 0.00 5.03
639 640 0.955919 CTGTCCTGGGTTTTCGGCTC 60.956 60.000 0.00 0.00 0.00 4.70
640 641 1.073199 CTGTCCTGGGTTTTCGGCT 59.927 57.895 0.00 0.00 0.00 5.52
641 642 1.971695 CCTGTCCTGGGTTTTCGGC 60.972 63.158 0.00 0.00 0.00 5.54
642 643 0.889186 CACCTGTCCTGGGTTTTCGG 60.889 60.000 0.00 0.00 34.44 4.30
643 644 0.889186 CCACCTGTCCTGGGTTTTCG 60.889 60.000 0.00 0.00 34.44 3.46
644 645 0.476771 TCCACCTGTCCTGGGTTTTC 59.523 55.000 0.00 0.00 34.44 2.29
645 646 0.185175 GTCCACCTGTCCTGGGTTTT 59.815 55.000 0.00 0.00 34.44 2.43
646 647 1.716028 GGTCCACCTGTCCTGGGTTT 61.716 60.000 0.00 0.00 34.44 3.27
647 648 2.154074 GGTCCACCTGTCCTGGGTT 61.154 63.158 0.00 0.00 34.44 4.11
648 649 2.529389 GGTCCACCTGTCCTGGGT 60.529 66.667 0.00 0.00 37.59 4.51
649 650 2.203998 AGGTCCACCTGTCCTGGG 60.204 66.667 0.00 0.00 46.55 4.45
658 659 2.104170 CTTCACTCTAGGAGGTCCACC 58.896 57.143 0.00 0.00 38.89 4.61
659 660 2.756207 GACTTCACTCTAGGAGGTCCAC 59.244 54.545 0.00 0.00 35.90 4.02
660 661 2.650322 AGACTTCACTCTAGGAGGTCCA 59.350 50.000 0.00 0.00 40.94 4.02
661 662 3.020984 CAGACTTCACTCTAGGAGGTCC 58.979 54.545 6.25 0.00 40.94 4.46
662 663 3.958018 TCAGACTTCACTCTAGGAGGTC 58.042 50.000 0.00 0.00 40.51 3.85
663 664 4.390129 TTCAGACTTCACTCTAGGAGGT 57.610 45.455 0.00 0.00 33.35 3.85
664 665 4.524714 TGTTTCAGACTTCACTCTAGGAGG 59.475 45.833 0.00 0.00 33.35 4.30
665 666 5.475220 TCTGTTTCAGACTTCACTCTAGGAG 59.525 44.000 0.00 0.00 35.39 3.69
666 667 5.386060 TCTGTTTCAGACTTCACTCTAGGA 58.614 41.667 0.00 0.00 35.39 2.94
1042 1047 2.026301 GCCTCTCCGTCGAATCCG 59.974 66.667 0.00 0.00 37.07 4.18
1239 1252 4.960938 TGAGGTTCAGCGCATATAAGAAT 58.039 39.130 11.47 0.00 0.00 2.40
1443 1475 1.536496 CCACACACAATGCACCAACAG 60.536 52.381 0.00 0.00 0.00 3.16
1668 1766 5.301551 TCAGTATGTTGCCTGACAATTTTGT 59.698 36.000 0.00 0.00 41.27 2.83
1797 1991 6.811170 TGACACTTCAAACCTGACAAAAATTC 59.189 34.615 0.00 0.00 0.00 2.17
1803 1997 5.913137 AAATGACACTTCAAACCTGACAA 57.087 34.783 0.00 0.00 34.61 3.18
1804 1998 5.913137 AAAATGACACTTCAAACCTGACA 57.087 34.783 0.00 0.00 34.61 3.58
1805 1999 7.973944 AGTTAAAAATGACACTTCAAACCTGAC 59.026 33.333 0.00 0.00 34.61 3.51
1806 2000 7.973388 CAGTTAAAAATGACACTTCAAACCTGA 59.027 33.333 0.00 0.00 34.61 3.86
1807 2001 7.254084 GCAGTTAAAAATGACACTTCAAACCTG 60.254 37.037 0.00 0.00 34.61 4.00
1808 2002 6.756542 GCAGTTAAAAATGACACTTCAAACCT 59.243 34.615 0.00 0.00 34.61 3.50
1809 2003 6.756542 AGCAGTTAAAAATGACACTTCAAACC 59.243 34.615 0.00 0.00 34.61 3.27
1810 2004 7.755582 AGCAGTTAAAAATGACACTTCAAAC 57.244 32.000 0.00 0.00 34.61 2.93
1812 2006 9.462174 CATTAGCAGTTAAAAATGACACTTCAA 57.538 29.630 0.00 0.00 34.61 2.69
1813 2007 8.629158 ACATTAGCAGTTAAAAATGACACTTCA 58.371 29.630 0.00 0.00 34.26 3.02
1815 2009 9.893305 GTACATTAGCAGTTAAAAATGACACTT 57.107 29.630 0.00 0.00 34.26 3.16
1816 2010 9.284968 AGTACATTAGCAGTTAAAAATGACACT 57.715 29.630 0.00 0.00 34.26 3.55
1817 2011 9.329913 CAGTACATTAGCAGTTAAAAATGACAC 57.670 33.333 0.00 0.00 34.26 3.67
1818 2012 9.278978 TCAGTACATTAGCAGTTAAAAATGACA 57.721 29.630 0.00 0.00 34.26 3.58
1841 2035 8.881743 TGACAAAAATTTGGAAACTGAATTCAG 58.118 29.630 29.74 29.74 44.43 3.02
1842 2036 8.783833 TGACAAAAATTTGGAAACTGAATTCA 57.216 26.923 8.12 8.12 42.34 2.57
1843 2037 8.337532 CCTGACAAAAATTTGGAAACTGAATTC 58.662 33.333 10.38 0.00 42.34 2.17
1844 2038 7.828717 ACCTGACAAAAATTTGGAAACTGAATT 59.171 29.630 10.38 0.00 42.34 2.17
1845 2039 7.337938 ACCTGACAAAAATTTGGAAACTGAAT 58.662 30.769 10.38 0.00 42.34 2.57
1846 2040 6.706295 ACCTGACAAAAATTTGGAAACTGAA 58.294 32.000 10.38 0.00 42.34 3.02
1847 2041 6.293004 ACCTGACAAAAATTTGGAAACTGA 57.707 33.333 10.38 0.00 42.34 3.41
1848 2042 6.983474 AACCTGACAAAAATTTGGAAACTG 57.017 33.333 10.38 3.82 42.34 3.16
1849 2043 7.164803 TCAAACCTGACAAAAATTTGGAAACT 58.835 30.769 10.38 0.00 42.34 2.66
1850 2044 7.371126 TCAAACCTGACAAAAATTTGGAAAC 57.629 32.000 10.38 0.84 42.34 2.78
1851 2045 7.663493 ACTTCAAACCTGACAAAAATTTGGAAA 59.337 29.630 10.38 0.00 42.34 3.13
1852 2046 7.118971 CACTTCAAACCTGACAAAAATTTGGAA 59.881 33.333 10.38 1.67 42.34 3.53
1853 2047 6.593382 CACTTCAAACCTGACAAAAATTTGGA 59.407 34.615 10.38 0.00 42.34 3.53
1854 2048 6.371271 ACACTTCAAACCTGACAAAAATTTGG 59.629 34.615 10.38 0.00 42.34 3.28
1855 2049 7.117523 TGACACTTCAAACCTGACAAAAATTTG 59.882 33.333 4.40 4.40 43.62 2.32
1856 2050 7.158021 TGACACTTCAAACCTGACAAAAATTT 58.842 30.769 0.00 0.00 0.00 1.82
1857 2051 6.696411 TGACACTTCAAACCTGACAAAAATT 58.304 32.000 0.00 0.00 0.00 1.82
1858 2052 6.279513 TGACACTTCAAACCTGACAAAAAT 57.720 33.333 0.00 0.00 0.00 1.82
1859 2053 5.713792 TGACACTTCAAACCTGACAAAAA 57.286 34.783 0.00 0.00 0.00 1.94
1860 2054 5.913137 ATGACACTTCAAACCTGACAAAA 57.087 34.783 0.00 0.00 34.61 2.44
1861 2055 5.913137 AATGACACTTCAAACCTGACAAA 57.087 34.783 0.00 0.00 34.61 2.83
1942 2185 6.237915 GCTGCCAACAATTTTCTGTAATATGC 60.238 38.462 0.00 0.00 0.00 3.14
2061 2380 2.036346 AGTTGCTGACAAAAATGAGCCC 59.964 45.455 0.00 0.00 37.58 5.19
2277 2645 9.257651 ACTACTGAAGTTGTGTATTACTGAAAC 57.742 33.333 0.00 0.00 33.35 2.78
2354 2802 3.643792 GCACCTGGAGGAAGTACATCTAT 59.356 47.826 0.00 0.00 38.94 1.98


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.