Multiple sequence alignment - TraesCS1D01G414000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G414000 chr1D 100.000 3098 0 0 1 3098 474236350 474233253 0.000000e+00 5722.0
1 TraesCS1D01G414000 chr1D 80.660 1334 202 34 818 2107 475237810 475236489 0.000000e+00 983.0
2 TraesCS1D01G414000 chr1D 81.594 1016 172 10 771 1777 475280578 475279569 0.000000e+00 826.0
3 TraesCS1D01G414000 chr1D 94.725 436 22 1 19 453 282721362 282721797 0.000000e+00 676.0
4 TraesCS1D01G414000 chr1D 89.655 116 11 1 2736 2851 474233499 474233385 2.490000e-31 147.0
5 TraesCS1D01G414000 chr1D 89.655 116 11 1 2852 2966 474233615 474233500 2.490000e-31 147.0
6 TraesCS1D01G414000 chr1D 95.402 87 4 0 491 577 236260186 236260272 4.170000e-29 139.0
7 TraesCS1D01G414000 chr1D 83.333 102 17 0 2750 2851 1235425 1235324 9.150000e-16 95.3
8 TraesCS1D01G414000 chrUn 98.014 2518 42 7 586 3098 150139288 150141802 0.000000e+00 4366.0
9 TraesCS1D01G414000 chrUn 98.014 2518 42 7 586 3098 321411986 321414500 0.000000e+00 4366.0
10 TraesCS1D01G414000 chrUn 97.975 2518 44 6 586 3098 172388830 172386315 0.000000e+00 4361.0
11 TraesCS1D01G414000 chrUn 98.029 1725 32 2 586 2309 172395937 172394214 0.000000e+00 2996.0
12 TraesCS1D01G414000 chrUn 97.653 852 19 1 586 1436 366677538 366676687 0.000000e+00 1461.0
13 TraesCS1D01G414000 chrUn 88.696 115 13 0 2852 2966 150141440 150141554 1.160000e-29 141.0
14 TraesCS1D01G414000 chrUn 88.793 116 12 1 2736 2851 150141555 150141669 1.160000e-29 141.0
15 TraesCS1D01G414000 chrUn 88.793 116 12 1 2736 2851 172386562 172386448 1.160000e-29 141.0
16 TraesCS1D01G414000 chrUn 88.793 116 12 1 2736 2851 321414253 321414367 1.160000e-29 141.0
17 TraesCS1D01G414000 chrUn 90.722 97 7 2 490 585 213242777 213242872 9.020000e-26 128.0
18 TraesCS1D01G414000 chr1B 80.910 1341 210 24 818 2117 661135947 661134612 0.000000e+00 1016.0
19 TraesCS1D01G414000 chr1B 94.833 329 13 2 126 453 368677719 368677394 7.660000e-141 510.0
20 TraesCS1D01G414000 chr1B 91.045 67 6 0 3032 3098 608855085 608855151 1.180000e-14 91.6
21 TraesCS1D01G414000 chr1A 79.590 1514 228 43 655 2110 570924291 570922801 0.000000e+00 1009.0
22 TraesCS1D01G414000 chr1A 82.000 150 25 2 2853 3001 33895214 33895362 3.240000e-25 126.0
23 TraesCS1D01G414000 chr1A 81.250 128 19 5 2700 2826 33895179 33895302 7.070000e-17 99.0
24 TraesCS1D01G414000 chr1A 100.000 35 0 0 460 494 568052386 568052420 7.170000e-07 65.8
25 TraesCS1D01G414000 chr5A 94.495 436 22 2 19 453 491697124 491697558 0.000000e+00 671.0
26 TraesCS1D01G414000 chr5A 90.828 338 25 5 126 459 491703366 491703701 6.090000e-122 448.0
27 TraesCS1D01G414000 chr5B 93.626 455 18 4 1 453 473119697 473120142 0.000000e+00 669.0
28 TraesCS1D01G414000 chr5B 93.803 355 18 3 99 452 36738210 36738561 5.880000e-147 531.0
29 TraesCS1D01G414000 chr5B 86.173 405 45 9 2182 2577 643859760 643859358 7.940000e-116 427.0
30 TraesCS1D01G414000 chr5B 85.432 405 49 8 2182 2577 643826160 643825757 2.220000e-111 412.0
31 TraesCS1D01G414000 chr5B 94.318 88 5 0 491 578 527068320 527068407 5.390000e-28 135.0
32 TraesCS1D01G414000 chr5B 93.023 43 3 0 452 494 527068093 527068135 2.580000e-06 63.9
33 TraesCS1D01G414000 chr3D 91.868 455 29 7 3 453 286900101 286900551 2.030000e-176 628.0
34 TraesCS1D01G414000 chr3D 82.927 410 54 13 2173 2577 582850606 582850208 3.800000e-94 355.0
35 TraesCS1D01G414000 chr3D 84.739 249 31 4 2852 3098 582995243 582995486 3.090000e-60 243.0
36 TraesCS1D01G414000 chr3D 85.430 151 21 1 2852 3002 447162013 447162162 4.140000e-34 156.0
37 TraesCS1D01G414000 chr3D 91.139 79 5 2 3020 3098 447133329 447133405 4.230000e-19 106.0
38 TraesCS1D01G414000 chr3A 90.870 471 16 7 1 453 681395206 681395667 9.500000e-170 606.0
39 TraesCS1D01G414000 chr2A 90.638 470 19 10 1 453 322826894 322826433 4.420000e-168 601.0
40 TraesCS1D01G414000 chr2A 97.674 43 1 0 452 494 200338375 200338417 1.190000e-09 75.0
41 TraesCS1D01G414000 chr5D 90.708 452 36 5 3 452 507219200 507218753 5.720000e-167 597.0
42 TraesCS1D01G414000 chr2B 88.445 476 29 12 3 453 564848056 564848530 4.520000e-153 551.0
43 TraesCS1D01G414000 chr2B 95.000 40 2 0 454 493 749857857 749857896 2.580000e-06 63.9
44 TraesCS1D01G414000 chr7B 88.470 451 46 4 3 451 387826761 387826315 9.770000e-150 540.0
45 TraesCS1D01G414000 chr7B 93.617 94 4 2 491 583 215973093 215973001 4.170000e-29 139.0
46 TraesCS1D01G414000 chr6D 83.824 408 55 9 2174 2577 10777653 10778053 8.110000e-101 377.0
47 TraesCS1D01G414000 chr6D 95.402 87 4 0 491 577 295044454 295044540 4.170000e-29 139.0
48 TraesCS1D01G414000 chr2D 83.292 407 56 8 2175 2576 620203931 620204330 6.310000e-97 364.0
49 TraesCS1D01G414000 chr2D 84.103 390 44 15 2196 2577 385571207 385570828 8.170000e-96 361.0
50 TraesCS1D01G414000 chr2D 97.701 87 2 0 491 577 645008135 645008221 1.920000e-32 150.0
51 TraesCS1D01G414000 chr2D 88.889 117 7 4 465 577 114513140 114513254 4.170000e-29 139.0
52 TraesCS1D01G414000 chr2D 95.294 85 4 0 494 578 644480332 644480248 5.390000e-28 135.0
53 TraesCS1D01G414000 chr7D 80.952 231 35 7 2870 3098 55926719 55926496 1.140000e-39 174.0
54 TraesCS1D01G414000 chr4D 96.552 87 3 0 491 577 8191941 8192027 8.950000e-31 145.0
55 TraesCS1D01G414000 chr6A 77.703 148 22 7 2706 2851 108673365 108673227 2.560000e-11 80.5
56 TraesCS1D01G414000 chr6B 97.500 40 1 0 456 495 76801919 76801880 5.540000e-08 69.4
57 TraesCS1D01G414000 chr6B 93.023 43 3 0 452 494 135365069 135365111 2.580000e-06 63.9
58 TraesCS1D01G414000 chr7A 93.023 43 3 0 452 494 5477040 5477082 2.580000e-06 63.9
59 TraesCS1D01G414000 chr3B 93.023 43 3 0 452 494 815370137 815370179 2.580000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G414000 chr1D 474233253 474236350 3097 True 2005.333333 5722 93.103333 1 3098 3 chr1D.!!$R4 3097
1 TraesCS1D01G414000 chr1D 475236489 475237810 1321 True 983.000000 983 80.660000 818 2107 1 chr1D.!!$R2 1289
2 TraesCS1D01G414000 chr1D 475279569 475280578 1009 True 826.000000 826 81.594000 771 1777 1 chr1D.!!$R3 1006
3 TraesCS1D01G414000 chrUn 172394214 172395937 1723 True 2996.000000 2996 98.029000 586 2309 1 chrUn.!!$R1 1723
4 TraesCS1D01G414000 chrUn 321411986 321414500 2514 False 2253.500000 4366 93.403500 586 3098 2 chrUn.!!$F3 2512
5 TraesCS1D01G414000 chrUn 172386315 172388830 2515 True 2251.000000 4361 93.384000 586 3098 2 chrUn.!!$R3 2512
6 TraesCS1D01G414000 chrUn 150139288 150141802 2514 False 1549.333333 4366 91.834333 586 3098 3 chrUn.!!$F2 2512
7 TraesCS1D01G414000 chrUn 366676687 366677538 851 True 1461.000000 1461 97.653000 586 1436 1 chrUn.!!$R2 850
8 TraesCS1D01G414000 chr1B 661134612 661135947 1335 True 1016.000000 1016 80.910000 818 2117 1 chr1B.!!$R2 1299
9 TraesCS1D01G414000 chr1A 570922801 570924291 1490 True 1009.000000 1009 79.590000 655 2110 1 chr1A.!!$R1 1455

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
28 29 0.033991 AGCTCCGCCTTCTCTCTGTA 60.034 55.0 0.0 0.0 0.0 2.74 F
29 30 0.101579 GCTCCGCCTTCTCTCTGTAC 59.898 60.0 0.0 0.0 0.0 2.90 F
181 182 0.403271 AGGACCTTGACATGCTTGCT 59.597 50.0 0.0 0.0 0.0 3.91 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1289 1335 0.310854 CAGCGACAAAAGACCCAACC 59.689 55.000 0.00 0.00 0.00 3.77 R
2017 2099 4.472108 TCGGGGGTTGTAATAGACAGATTT 59.528 41.667 0.00 0.00 39.88 2.17 R
2182 2264 4.026475 GCGTTTGAGCTCATGTGTAGATAC 60.026 45.833 19.04 4.23 0.00 2.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.366469 TTCTTCTTGAGCTCCGCCT 58.634 52.632 12.15 0.00 0.00 5.52
19 20 0.687354 TTCTTCTTGAGCTCCGCCTT 59.313 50.000 12.15 0.00 0.00 4.35
20 21 0.247736 TCTTCTTGAGCTCCGCCTTC 59.752 55.000 12.15 0.00 0.00 3.46
21 22 0.248843 CTTCTTGAGCTCCGCCTTCT 59.751 55.000 12.15 0.00 0.00 2.85
22 23 0.247736 TTCTTGAGCTCCGCCTTCTC 59.752 55.000 12.15 0.00 0.00 2.87
23 24 0.613292 TCTTGAGCTCCGCCTTCTCT 60.613 55.000 12.15 0.00 0.00 3.10
24 25 0.179113 CTTGAGCTCCGCCTTCTCTC 60.179 60.000 12.15 0.00 0.00 3.20
25 26 0.613292 TTGAGCTCCGCCTTCTCTCT 60.613 55.000 12.15 0.00 0.00 3.10
26 27 1.318886 TGAGCTCCGCCTTCTCTCTG 61.319 60.000 12.15 0.00 0.00 3.35
27 28 1.304879 AGCTCCGCCTTCTCTCTGT 60.305 57.895 0.00 0.00 0.00 3.41
28 29 0.033991 AGCTCCGCCTTCTCTCTGTA 60.034 55.000 0.00 0.00 0.00 2.74
29 30 0.101579 GCTCCGCCTTCTCTCTGTAC 59.898 60.000 0.00 0.00 0.00 2.90
30 31 1.757682 CTCCGCCTTCTCTCTGTACT 58.242 55.000 0.00 0.00 0.00 2.73
31 32 2.920524 CTCCGCCTTCTCTCTGTACTA 58.079 52.381 0.00 0.00 0.00 1.82
32 33 3.482436 CTCCGCCTTCTCTCTGTACTAT 58.518 50.000 0.00 0.00 0.00 2.12
33 34 3.215151 TCCGCCTTCTCTCTGTACTATG 58.785 50.000 0.00 0.00 0.00 2.23
34 35 2.952978 CCGCCTTCTCTCTGTACTATGT 59.047 50.000 0.00 0.00 0.00 2.29
35 36 3.243234 CCGCCTTCTCTCTGTACTATGTG 60.243 52.174 0.00 0.00 0.00 3.21
36 37 3.378742 CGCCTTCTCTCTGTACTATGTGT 59.621 47.826 0.00 0.00 0.00 3.72
37 38 4.142359 CGCCTTCTCTCTGTACTATGTGTT 60.142 45.833 0.00 0.00 0.00 3.32
38 39 5.105752 GCCTTCTCTCTGTACTATGTGTTG 58.894 45.833 0.00 0.00 0.00 3.33
39 40 5.336849 GCCTTCTCTCTGTACTATGTGTTGT 60.337 44.000 0.00 0.00 0.00 3.32
40 41 6.096036 CCTTCTCTCTGTACTATGTGTTGTG 58.904 44.000 0.00 0.00 0.00 3.33
41 42 5.060662 TCTCTCTGTACTATGTGTTGTGC 57.939 43.478 0.00 0.00 0.00 4.57
42 43 4.767409 TCTCTCTGTACTATGTGTTGTGCT 59.233 41.667 0.00 0.00 0.00 4.40
43 44 5.243954 TCTCTCTGTACTATGTGTTGTGCTT 59.756 40.000 0.00 0.00 0.00 3.91
44 45 5.230182 TCTCTGTACTATGTGTTGTGCTTG 58.770 41.667 0.00 0.00 0.00 4.01
45 46 4.314961 TCTGTACTATGTGTTGTGCTTGG 58.685 43.478 0.00 0.00 0.00 3.61
46 47 4.065088 CTGTACTATGTGTTGTGCTTGGT 58.935 43.478 0.00 0.00 0.00 3.67
47 48 4.456535 TGTACTATGTGTTGTGCTTGGTT 58.543 39.130 0.00 0.00 0.00 3.67
48 49 4.884744 TGTACTATGTGTTGTGCTTGGTTT 59.115 37.500 0.00 0.00 0.00 3.27
49 50 5.358442 TGTACTATGTGTTGTGCTTGGTTTT 59.642 36.000 0.00 0.00 0.00 2.43
50 51 5.337578 ACTATGTGTTGTGCTTGGTTTTT 57.662 34.783 0.00 0.00 0.00 1.94
51 52 6.458232 ACTATGTGTTGTGCTTGGTTTTTA 57.542 33.333 0.00 0.00 0.00 1.52
52 53 7.049799 ACTATGTGTTGTGCTTGGTTTTTAT 57.950 32.000 0.00 0.00 0.00 1.40
53 54 7.496747 ACTATGTGTTGTGCTTGGTTTTTATT 58.503 30.769 0.00 0.00 0.00 1.40
54 55 6.843069 ATGTGTTGTGCTTGGTTTTTATTC 57.157 33.333 0.00 0.00 0.00 1.75
55 56 4.800993 TGTGTTGTGCTTGGTTTTTATTCG 59.199 37.500 0.00 0.00 0.00 3.34
56 57 4.801516 GTGTTGTGCTTGGTTTTTATTCGT 59.198 37.500 0.00 0.00 0.00 3.85
57 58 5.289917 GTGTTGTGCTTGGTTTTTATTCGTT 59.710 36.000 0.00 0.00 0.00 3.85
58 59 5.869888 TGTTGTGCTTGGTTTTTATTCGTTT 59.130 32.000 0.00 0.00 0.00 3.60
59 60 5.957910 TGTGCTTGGTTTTTATTCGTTTG 57.042 34.783 0.00 0.00 0.00 2.93
60 61 4.268884 TGTGCTTGGTTTTTATTCGTTTGC 59.731 37.500 0.00 0.00 0.00 3.68
61 62 4.268884 GTGCTTGGTTTTTATTCGTTTGCA 59.731 37.500 0.00 0.00 0.00 4.08
62 63 4.505922 TGCTTGGTTTTTATTCGTTTGCAG 59.494 37.500 0.00 0.00 0.00 4.41
63 64 4.742659 GCTTGGTTTTTATTCGTTTGCAGA 59.257 37.500 0.00 0.00 0.00 4.26
64 65 5.405269 GCTTGGTTTTTATTCGTTTGCAGAT 59.595 36.000 0.00 0.00 0.00 2.90
65 66 6.399986 GCTTGGTTTTTATTCGTTTGCAGATC 60.400 38.462 0.00 0.00 0.00 2.75
66 67 6.325919 TGGTTTTTATTCGTTTGCAGATCT 57.674 33.333 0.00 0.00 0.00 2.75
67 68 6.744112 TGGTTTTTATTCGTTTGCAGATCTT 58.256 32.000 0.00 0.00 0.00 2.40
68 69 7.206687 TGGTTTTTATTCGTTTGCAGATCTTT 58.793 30.769 0.00 0.00 0.00 2.52
69 70 7.168972 TGGTTTTTATTCGTTTGCAGATCTTTG 59.831 33.333 0.00 0.00 0.00 2.77
70 71 7.359181 GGTTTTTATTCGTTTGCAGATCTTTGG 60.359 37.037 0.00 0.00 0.00 3.28
71 72 6.567687 TTTATTCGTTTGCAGATCTTTGGA 57.432 33.333 0.00 0.00 0.00 3.53
72 73 4.691860 ATTCGTTTGCAGATCTTTGGAG 57.308 40.909 0.00 0.00 0.00 3.86
73 74 3.126001 TCGTTTGCAGATCTTTGGAGT 57.874 42.857 0.00 0.00 0.00 3.85
74 75 3.476552 TCGTTTGCAGATCTTTGGAGTT 58.523 40.909 0.00 0.00 0.00 3.01
75 76 3.882888 TCGTTTGCAGATCTTTGGAGTTT 59.117 39.130 0.00 0.00 0.00 2.66
76 77 3.976942 CGTTTGCAGATCTTTGGAGTTTG 59.023 43.478 0.00 0.00 0.00 2.93
77 78 4.261155 CGTTTGCAGATCTTTGGAGTTTGA 60.261 41.667 0.00 0.00 0.00 2.69
78 79 5.563475 CGTTTGCAGATCTTTGGAGTTTGAT 60.563 40.000 0.00 0.00 0.00 2.57
79 80 5.381174 TTGCAGATCTTTGGAGTTTGATG 57.619 39.130 0.00 0.00 0.00 3.07
80 81 3.192001 TGCAGATCTTTGGAGTTTGATGC 59.808 43.478 0.00 0.00 0.00 3.91
81 82 3.442977 GCAGATCTTTGGAGTTTGATGCT 59.557 43.478 0.00 0.00 0.00 3.79
82 83 4.637534 GCAGATCTTTGGAGTTTGATGCTA 59.362 41.667 0.00 0.00 0.00 3.49
83 84 5.298777 GCAGATCTTTGGAGTTTGATGCTAT 59.701 40.000 0.00 0.00 0.00 2.97
84 85 6.484643 GCAGATCTTTGGAGTTTGATGCTATA 59.515 38.462 0.00 0.00 0.00 1.31
85 86 7.174599 GCAGATCTTTGGAGTTTGATGCTATAT 59.825 37.037 0.00 0.00 0.00 0.86
86 87 8.719648 CAGATCTTTGGAGTTTGATGCTATATC 58.280 37.037 0.00 0.00 0.00 1.63
87 88 7.601886 AGATCTTTGGAGTTTGATGCTATATCG 59.398 37.037 0.00 0.00 0.00 2.92
88 89 5.466728 TCTTTGGAGTTTGATGCTATATCGC 59.533 40.000 0.00 0.00 0.00 4.58
89 90 3.317150 TGGAGTTTGATGCTATATCGCG 58.683 45.455 0.00 0.00 0.00 5.87
90 91 3.005367 TGGAGTTTGATGCTATATCGCGA 59.995 43.478 13.09 13.09 0.00 5.87
91 92 3.987868 GGAGTTTGATGCTATATCGCGAA 59.012 43.478 15.24 2.68 0.00 4.70
92 93 4.090642 GGAGTTTGATGCTATATCGCGAAG 59.909 45.833 15.24 7.54 0.00 3.79
110 111 5.149054 CGAAGCTGGAGTACATCAATTTC 57.851 43.478 0.00 0.00 0.00 2.17
111 112 4.872691 CGAAGCTGGAGTACATCAATTTCT 59.127 41.667 0.00 0.00 0.00 2.52
112 113 5.352569 CGAAGCTGGAGTACATCAATTTCTT 59.647 40.000 0.00 0.00 0.00 2.52
113 114 6.535150 CGAAGCTGGAGTACATCAATTTCTTA 59.465 38.462 0.00 0.00 0.00 2.10
114 115 7.225538 CGAAGCTGGAGTACATCAATTTCTTAT 59.774 37.037 0.00 0.00 0.00 1.73
115 116 8.814038 AAGCTGGAGTACATCAATTTCTTATT 57.186 30.769 0.00 0.00 0.00 1.40
116 117 8.814038 AGCTGGAGTACATCAATTTCTTATTT 57.186 30.769 0.00 0.00 0.00 1.40
117 118 9.247861 AGCTGGAGTACATCAATTTCTTATTTT 57.752 29.630 0.00 0.00 0.00 1.82
118 119 9.294030 GCTGGAGTACATCAATTTCTTATTTTG 57.706 33.333 0.00 0.00 0.00 2.44
119 120 9.294030 CTGGAGTACATCAATTTCTTATTTTGC 57.706 33.333 0.00 0.00 0.00 3.68
120 121 8.801299 TGGAGTACATCAATTTCTTATTTTGCA 58.199 29.630 0.00 0.00 0.00 4.08
121 122 9.294030 GGAGTACATCAATTTCTTATTTTGCAG 57.706 33.333 0.00 0.00 0.00 4.41
122 123 9.294030 GAGTACATCAATTTCTTATTTTGCAGG 57.706 33.333 0.00 0.00 0.00 4.85
123 124 8.253113 AGTACATCAATTTCTTATTTTGCAGGG 58.747 33.333 0.00 0.00 0.00 4.45
124 125 7.008021 ACATCAATTTCTTATTTTGCAGGGT 57.992 32.000 0.00 0.00 0.00 4.34
125 126 7.452562 ACATCAATTTCTTATTTTGCAGGGTT 58.547 30.769 0.00 0.00 0.00 4.11
126 127 7.938490 ACATCAATTTCTTATTTTGCAGGGTTT 59.062 29.630 0.00 0.00 0.00 3.27
127 128 8.785946 CATCAATTTCTTATTTTGCAGGGTTTT 58.214 29.630 0.00 0.00 0.00 2.43
128 129 8.376889 TCAATTTCTTATTTTGCAGGGTTTTC 57.623 30.769 0.00 0.00 0.00 2.29
129 130 7.989741 TCAATTTCTTATTTTGCAGGGTTTTCA 59.010 29.630 0.00 0.00 0.00 2.69
130 131 8.785946 CAATTTCTTATTTTGCAGGGTTTTCAT 58.214 29.630 0.00 0.00 0.00 2.57
131 132 7.961325 TTTCTTATTTTGCAGGGTTTTCATC 57.039 32.000 0.00 0.00 0.00 2.92
132 133 6.916360 TCTTATTTTGCAGGGTTTTCATCT 57.084 33.333 0.00 0.00 0.00 2.90
133 134 7.301868 TCTTATTTTGCAGGGTTTTCATCTT 57.698 32.000 0.00 0.00 0.00 2.40
134 135 7.153985 TCTTATTTTGCAGGGTTTTCATCTTG 58.846 34.615 0.00 0.00 0.00 3.02
135 136 3.749665 TTTGCAGGGTTTTCATCTTGG 57.250 42.857 0.00 0.00 0.00 3.61
136 137 2.380064 TGCAGGGTTTTCATCTTGGT 57.620 45.000 0.00 0.00 0.00 3.67
137 138 2.676748 TGCAGGGTTTTCATCTTGGTT 58.323 42.857 0.00 0.00 0.00 3.67
138 139 2.364970 TGCAGGGTTTTCATCTTGGTTG 59.635 45.455 0.00 0.00 0.00 3.77
139 140 2.867647 GCAGGGTTTTCATCTTGGTTGC 60.868 50.000 0.00 0.00 0.00 4.17
140 141 2.364970 CAGGGTTTTCATCTTGGTTGCA 59.635 45.455 0.00 0.00 0.00 4.08
141 142 2.629617 AGGGTTTTCATCTTGGTTGCAG 59.370 45.455 0.00 0.00 0.00 4.41
142 143 2.627699 GGGTTTTCATCTTGGTTGCAGA 59.372 45.455 0.00 0.00 0.00 4.26
143 144 3.259123 GGGTTTTCATCTTGGTTGCAGAT 59.741 43.478 0.00 0.00 0.00 2.90
144 145 4.240096 GGTTTTCATCTTGGTTGCAGATG 58.760 43.478 6.56 6.56 46.32 2.90
145 146 4.262164 GGTTTTCATCTTGGTTGCAGATGT 60.262 41.667 11.38 0.00 45.50 3.06
146 147 5.048083 GGTTTTCATCTTGGTTGCAGATGTA 60.048 40.000 11.38 1.50 45.50 2.29
147 148 6.350445 GGTTTTCATCTTGGTTGCAGATGTAT 60.350 38.462 11.38 0.00 45.50 2.29
148 149 6.839124 TTTCATCTTGGTTGCAGATGTATT 57.161 33.333 11.38 0.00 45.50 1.89
149 150 6.839124 TTCATCTTGGTTGCAGATGTATTT 57.161 33.333 11.38 0.00 45.50 1.40
150 151 6.839124 TCATCTTGGTTGCAGATGTATTTT 57.161 33.333 11.38 0.00 45.50 1.82
151 152 6.623486 TCATCTTGGTTGCAGATGTATTTTG 58.377 36.000 11.38 0.00 45.50 2.44
152 153 4.808558 TCTTGGTTGCAGATGTATTTTGC 58.191 39.130 0.00 0.00 38.30 3.68
153 154 4.523943 TCTTGGTTGCAGATGTATTTTGCT 59.476 37.500 0.00 0.00 38.60 3.91
154 155 4.177165 TGGTTGCAGATGTATTTTGCTG 57.823 40.909 0.00 0.00 38.60 4.41
155 156 3.573538 TGGTTGCAGATGTATTTTGCTGT 59.426 39.130 0.00 0.00 38.60 4.40
156 157 4.039004 TGGTTGCAGATGTATTTTGCTGTT 59.961 37.500 0.00 0.00 38.60 3.16
157 158 4.990426 GGTTGCAGATGTATTTTGCTGTTT 59.010 37.500 0.00 0.00 38.60 2.83
158 159 5.119125 GGTTGCAGATGTATTTTGCTGTTTC 59.881 40.000 0.00 0.00 38.60 2.78
159 160 5.710513 TGCAGATGTATTTTGCTGTTTCT 57.289 34.783 0.00 0.00 38.60 2.52
160 161 6.816134 TGCAGATGTATTTTGCTGTTTCTA 57.184 33.333 0.00 0.00 38.60 2.10
161 162 6.611381 TGCAGATGTATTTTGCTGTTTCTAC 58.389 36.000 0.00 0.00 38.60 2.59
162 163 6.206438 TGCAGATGTATTTTGCTGTTTCTACA 59.794 34.615 0.00 0.00 38.60 2.74
173 174 4.336889 CTGTTTCTACAGGACCTTGACA 57.663 45.455 0.00 0.00 46.52 3.58
174 175 4.899502 CTGTTTCTACAGGACCTTGACAT 58.100 43.478 0.00 0.00 46.52 3.06
175 176 4.641396 TGTTTCTACAGGACCTTGACATG 58.359 43.478 0.00 0.00 0.00 3.21
176 177 3.334583 TTCTACAGGACCTTGACATGC 57.665 47.619 0.00 0.00 0.00 4.06
177 178 2.540383 TCTACAGGACCTTGACATGCT 58.460 47.619 0.00 0.00 0.00 3.79
178 179 2.906389 TCTACAGGACCTTGACATGCTT 59.094 45.455 0.00 0.00 0.00 3.91
179 180 1.901591 ACAGGACCTTGACATGCTTG 58.098 50.000 0.00 0.00 0.00 4.01
180 181 0.524862 CAGGACCTTGACATGCTTGC 59.475 55.000 0.00 0.00 0.00 4.01
181 182 0.403271 AGGACCTTGACATGCTTGCT 59.597 50.000 0.00 0.00 0.00 3.91
182 183 1.202976 AGGACCTTGACATGCTTGCTT 60.203 47.619 0.00 0.00 0.00 3.91
183 184 1.200948 GGACCTTGACATGCTTGCTTC 59.799 52.381 0.00 0.00 0.00 3.86
184 185 1.881973 GACCTTGACATGCTTGCTTCA 59.118 47.619 0.00 0.00 0.00 3.02
185 186 2.294233 GACCTTGACATGCTTGCTTCAA 59.706 45.455 0.00 2.92 0.00 2.69
186 187 2.295349 ACCTTGACATGCTTGCTTCAAG 59.705 45.455 18.60 18.60 43.57 3.02
187 188 2.555325 CCTTGACATGCTTGCTTCAAGA 59.445 45.455 23.55 1.51 43.42 3.02
188 189 3.005050 CCTTGACATGCTTGCTTCAAGAA 59.995 43.478 23.55 0.12 43.42 2.52
189 190 4.500205 CCTTGACATGCTTGCTTCAAGAAA 60.500 41.667 23.55 0.00 43.42 2.52
190 191 4.233123 TGACATGCTTGCTTCAAGAAAG 57.767 40.909 0.00 0.00 43.42 2.62
191 192 3.884693 TGACATGCTTGCTTCAAGAAAGA 59.115 39.130 9.62 0.00 43.42 2.52
192 193 4.521639 TGACATGCTTGCTTCAAGAAAGAT 59.478 37.500 9.62 0.00 43.42 2.40
193 194 4.806330 ACATGCTTGCTTCAAGAAAGATG 58.194 39.130 9.62 11.51 43.42 2.90
194 195 3.928727 TGCTTGCTTCAAGAAAGATGG 57.071 42.857 9.62 0.00 43.42 3.51
195 196 2.029649 TGCTTGCTTCAAGAAAGATGGC 60.030 45.455 9.62 0.00 43.42 4.40
196 197 2.230750 GCTTGCTTCAAGAAAGATGGCT 59.769 45.455 9.62 0.00 43.42 4.75
197 198 3.672781 GCTTGCTTCAAGAAAGATGGCTC 60.673 47.826 9.62 0.00 43.42 4.70
198 199 3.144657 TGCTTCAAGAAAGATGGCTCA 57.855 42.857 0.00 0.00 37.12 4.26
199 200 3.693807 TGCTTCAAGAAAGATGGCTCAT 58.306 40.909 0.00 0.00 37.12 2.90
200 201 3.693085 TGCTTCAAGAAAGATGGCTCATC 59.307 43.478 6.98 6.98 40.80 2.92
201 202 3.693085 GCTTCAAGAAAGATGGCTCATCA 59.307 43.478 14.93 0.00 42.72 3.07
202 203 4.201930 GCTTCAAGAAAGATGGCTCATCAG 60.202 45.833 14.93 4.95 42.72 2.90
203 204 4.564782 TCAAGAAAGATGGCTCATCAGT 57.435 40.909 14.93 4.77 42.72 3.41
204 205 5.682234 TCAAGAAAGATGGCTCATCAGTA 57.318 39.130 14.93 0.00 42.72 2.74
205 206 5.668471 TCAAGAAAGATGGCTCATCAGTAG 58.332 41.667 14.93 3.45 42.72 2.57
206 207 5.188555 TCAAGAAAGATGGCTCATCAGTAGT 59.811 40.000 14.93 0.00 42.72 2.73
207 208 5.021033 AGAAAGATGGCTCATCAGTAGTG 57.979 43.478 14.93 0.00 42.72 2.74
208 209 4.713814 AGAAAGATGGCTCATCAGTAGTGA 59.286 41.667 14.93 1.95 42.72 3.41
209 210 5.188555 AGAAAGATGGCTCATCAGTAGTGAA 59.811 40.000 3.93 0.00 42.72 3.18
210 211 4.669206 AGATGGCTCATCAGTAGTGAAG 57.331 45.455 3.93 0.00 42.72 3.02
211 212 2.680312 TGGCTCATCAGTAGTGAAGC 57.320 50.000 13.68 13.68 35.88 3.86
212 213 1.901833 TGGCTCATCAGTAGTGAAGCA 59.098 47.619 20.62 8.58 35.88 3.91
213 214 2.302733 TGGCTCATCAGTAGTGAAGCAA 59.697 45.455 20.62 10.81 35.88 3.91
214 215 3.244526 TGGCTCATCAGTAGTGAAGCAAA 60.245 43.478 20.62 9.52 35.88 3.68
215 216 3.753272 GGCTCATCAGTAGTGAAGCAAAA 59.247 43.478 20.62 0.00 35.88 2.44
216 217 4.142730 GGCTCATCAGTAGTGAAGCAAAAG 60.143 45.833 20.62 5.93 35.88 2.27
217 218 4.142730 GCTCATCAGTAGTGAAGCAAAAGG 60.143 45.833 16.18 0.07 35.88 3.11
218 219 3.753272 TCATCAGTAGTGAAGCAAAAGGC 59.247 43.478 3.93 0.00 35.88 4.35
219 220 3.503363 CATCAGTAGTGAAGCAAAAGGCA 59.497 43.478 3.93 0.00 38.86 4.75
220 221 4.022935 CATCAGTAGTGAAGCAAAAGGCAA 60.023 41.667 3.93 0.00 38.86 4.52
221 222 4.022849 ATCAGTAGTGAAGCAAAAGGCAAC 60.023 41.667 3.93 0.00 38.86 4.17
222 223 6.440052 ATCAGTAGTGAAGCAAAAGGCAACA 61.440 40.000 3.93 0.00 38.86 3.33
223 224 8.173410 ATCAGTAGTGAAGCAAAAGGCAACAG 62.173 42.308 3.93 0.00 38.86 3.16
228 229 3.367678 GCAAAAGGCAACAGCAACT 57.632 47.368 0.00 0.00 43.97 3.16
229 230 1.655484 GCAAAAGGCAACAGCAACTT 58.345 45.000 0.00 0.00 43.97 2.66
230 231 1.594397 GCAAAAGGCAACAGCAACTTC 59.406 47.619 0.00 0.00 43.97 3.01
231 232 2.739609 GCAAAAGGCAACAGCAACTTCT 60.740 45.455 0.00 0.00 43.97 2.85
232 233 3.490761 GCAAAAGGCAACAGCAACTTCTA 60.491 43.478 0.00 0.00 43.97 2.10
233 234 4.293415 CAAAAGGCAACAGCAACTTCTAG 58.707 43.478 0.00 0.00 41.41 2.43
234 235 2.938956 AGGCAACAGCAACTTCTAGT 57.061 45.000 0.00 0.00 41.41 2.57
235 236 3.214696 AGGCAACAGCAACTTCTAGTT 57.785 42.857 0.00 0.00 37.91 2.24
236 237 3.555966 AGGCAACAGCAACTTCTAGTTT 58.444 40.909 0.00 0.00 35.75 2.66
237 238 3.565902 AGGCAACAGCAACTTCTAGTTTC 59.434 43.478 0.00 0.00 35.75 2.78
238 239 3.315191 GGCAACAGCAACTTCTAGTTTCA 59.685 43.478 0.00 0.00 36.03 2.69
239 240 4.531332 GCAACAGCAACTTCTAGTTTCAG 58.469 43.478 0.00 0.00 36.03 3.02
240 241 4.273480 GCAACAGCAACTTCTAGTTTCAGA 59.727 41.667 0.00 0.00 36.03 3.27
241 242 5.049129 GCAACAGCAACTTCTAGTTTCAGAT 60.049 40.000 0.00 0.00 36.03 2.90
242 243 6.514048 GCAACAGCAACTTCTAGTTTCAGATT 60.514 38.462 0.00 0.00 36.03 2.40
243 244 6.793492 ACAGCAACTTCTAGTTTCAGATTC 57.207 37.500 0.00 0.00 36.03 2.52
244 245 6.291377 ACAGCAACTTCTAGTTTCAGATTCA 58.709 36.000 0.00 0.00 36.03 2.57
245 246 6.426328 ACAGCAACTTCTAGTTTCAGATTCAG 59.574 38.462 0.00 0.00 36.03 3.02
246 247 6.648310 CAGCAACTTCTAGTTTCAGATTCAGA 59.352 38.462 0.00 0.00 36.03 3.27
247 248 6.873076 AGCAACTTCTAGTTTCAGATTCAGAG 59.127 38.462 0.00 0.00 36.03 3.35
248 249 6.648725 GCAACTTCTAGTTTCAGATTCAGAGT 59.351 38.462 0.00 0.00 36.03 3.24
249 250 7.359933 GCAACTTCTAGTTTCAGATTCAGAGTG 60.360 40.741 0.00 0.00 36.03 3.51
250 251 7.296628 ACTTCTAGTTTCAGATTCAGAGTGT 57.703 36.000 0.00 0.00 0.00 3.55
251 252 7.731054 ACTTCTAGTTTCAGATTCAGAGTGTT 58.269 34.615 0.00 0.00 0.00 3.32
252 253 7.870445 ACTTCTAGTTTCAGATTCAGAGTGTTC 59.130 37.037 0.00 0.00 0.00 3.18
253 254 6.692486 TCTAGTTTCAGATTCAGAGTGTTCC 58.308 40.000 0.00 0.00 0.00 3.62
254 255 5.559148 AGTTTCAGATTCAGAGTGTTCCT 57.441 39.130 0.00 0.00 0.00 3.36
255 256 5.546526 AGTTTCAGATTCAGAGTGTTCCTC 58.453 41.667 0.00 0.00 40.80 3.71
266 267 3.843999 GAGTGTTCCTCTGCTAGTTCTG 58.156 50.000 0.00 0.00 37.22 3.02
267 268 3.501349 AGTGTTCCTCTGCTAGTTCTGA 58.499 45.455 0.00 0.00 0.00 3.27
268 269 3.257127 AGTGTTCCTCTGCTAGTTCTGAC 59.743 47.826 0.00 0.00 0.00 3.51
269 270 2.563179 TGTTCCTCTGCTAGTTCTGACC 59.437 50.000 0.00 0.00 0.00 4.02
270 271 2.563179 GTTCCTCTGCTAGTTCTGACCA 59.437 50.000 0.00 0.00 0.00 4.02
271 272 3.107402 TCCTCTGCTAGTTCTGACCAT 57.893 47.619 0.00 0.00 0.00 3.55
272 273 2.762887 TCCTCTGCTAGTTCTGACCATG 59.237 50.000 0.00 0.00 0.00 3.66
273 274 2.499289 CCTCTGCTAGTTCTGACCATGT 59.501 50.000 0.00 0.00 0.00 3.21
274 275 3.055530 CCTCTGCTAGTTCTGACCATGTT 60.056 47.826 0.00 0.00 0.00 2.71
275 276 3.930336 TCTGCTAGTTCTGACCATGTTG 58.070 45.455 0.00 0.00 0.00 3.33
276 277 3.578282 TCTGCTAGTTCTGACCATGTTGA 59.422 43.478 0.00 0.00 0.00 3.18
277 278 4.223700 TCTGCTAGTTCTGACCATGTTGAT 59.776 41.667 0.00 0.00 0.00 2.57
278 279 4.507710 TGCTAGTTCTGACCATGTTGATC 58.492 43.478 0.00 0.00 0.00 2.92
279 280 4.020307 TGCTAGTTCTGACCATGTTGATCA 60.020 41.667 0.00 0.00 0.00 2.92
280 281 5.121811 GCTAGTTCTGACCATGTTGATCAT 58.878 41.667 0.00 0.00 37.22 2.45
291 292 4.574674 ATGTTGATCATGGTGTAGTGGT 57.425 40.909 0.00 0.00 35.19 4.16
292 293 3.937814 TGTTGATCATGGTGTAGTGGTC 58.062 45.455 0.00 0.00 0.00 4.02
293 294 3.326297 TGTTGATCATGGTGTAGTGGTCA 59.674 43.478 0.00 0.00 33.88 4.02
294 295 4.019411 TGTTGATCATGGTGTAGTGGTCAT 60.019 41.667 0.00 0.00 35.56 3.06
295 296 4.842531 TGATCATGGTGTAGTGGTCATT 57.157 40.909 0.00 0.00 30.91 2.57
296 297 5.178096 TGATCATGGTGTAGTGGTCATTT 57.822 39.130 0.00 0.00 30.91 2.32
297 298 5.185454 TGATCATGGTGTAGTGGTCATTTC 58.815 41.667 0.00 0.00 30.91 2.17
298 299 3.950397 TCATGGTGTAGTGGTCATTTCC 58.050 45.455 0.00 0.00 0.00 3.13
299 300 3.329225 TCATGGTGTAGTGGTCATTTCCA 59.671 43.478 0.00 0.00 34.85 3.53
307 308 2.380064 TGGTCATTTCCACTTTGCCT 57.620 45.000 0.00 0.00 31.96 4.75
308 309 2.238521 TGGTCATTTCCACTTTGCCTC 58.761 47.619 0.00 0.00 31.96 4.70
309 310 2.238521 GGTCATTTCCACTTTGCCTCA 58.761 47.619 0.00 0.00 0.00 3.86
310 311 2.827921 GGTCATTTCCACTTTGCCTCAT 59.172 45.455 0.00 0.00 0.00 2.90
311 312 4.016444 GGTCATTTCCACTTTGCCTCATA 58.984 43.478 0.00 0.00 0.00 2.15
312 313 4.646492 GGTCATTTCCACTTTGCCTCATAT 59.354 41.667 0.00 0.00 0.00 1.78
313 314 5.827797 GGTCATTTCCACTTTGCCTCATATA 59.172 40.000 0.00 0.00 0.00 0.86
314 315 6.016777 GGTCATTTCCACTTTGCCTCATATAG 60.017 42.308 0.00 0.00 0.00 1.31
316 317 4.437682 TTCCACTTTGCCTCATATAGGG 57.562 45.455 0.00 0.00 46.65 3.53
317 318 3.393687 TCCACTTTGCCTCATATAGGGT 58.606 45.455 0.00 0.00 46.65 4.34
318 319 3.391296 TCCACTTTGCCTCATATAGGGTC 59.609 47.826 0.00 0.00 46.65 4.46
319 320 3.392616 CCACTTTGCCTCATATAGGGTCT 59.607 47.826 0.00 0.00 46.65 3.85
320 321 4.141390 CCACTTTGCCTCATATAGGGTCTT 60.141 45.833 0.00 0.00 46.65 3.01
321 322 5.440610 CACTTTGCCTCATATAGGGTCTTT 58.559 41.667 0.00 0.00 46.65 2.52
322 323 5.529060 CACTTTGCCTCATATAGGGTCTTTC 59.471 44.000 0.00 0.00 46.65 2.62
323 324 5.430089 ACTTTGCCTCATATAGGGTCTTTCT 59.570 40.000 0.00 0.00 46.65 2.52
324 325 5.975988 TTGCCTCATATAGGGTCTTTCTT 57.024 39.130 0.00 0.00 46.65 2.52
325 326 5.552870 TGCCTCATATAGGGTCTTTCTTC 57.447 43.478 0.00 0.00 46.65 2.87
326 327 4.968719 TGCCTCATATAGGGTCTTTCTTCA 59.031 41.667 0.00 0.00 46.65 3.02
327 328 5.070981 TGCCTCATATAGGGTCTTTCTTCAG 59.929 44.000 0.00 0.00 46.65 3.02
328 329 5.546526 CCTCATATAGGGTCTTTCTTCAGC 58.453 45.833 0.00 0.00 42.32 4.26
329 330 5.306678 CCTCATATAGGGTCTTTCTTCAGCT 59.693 44.000 0.00 0.00 42.32 4.24
330 331 6.412362 TCATATAGGGTCTTTCTTCAGCTC 57.588 41.667 0.00 0.00 0.00 4.09
331 332 6.139671 TCATATAGGGTCTTTCTTCAGCTCT 58.860 40.000 0.00 0.00 0.00 4.09
332 333 6.266558 TCATATAGGGTCTTTCTTCAGCTCTC 59.733 42.308 0.00 0.00 0.00 3.20
333 334 2.901291 AGGGTCTTTCTTCAGCTCTCT 58.099 47.619 0.00 0.00 0.00 3.10
334 335 3.247162 AGGGTCTTTCTTCAGCTCTCTT 58.753 45.455 0.00 0.00 0.00 2.85
335 336 3.650461 AGGGTCTTTCTTCAGCTCTCTTT 59.350 43.478 0.00 0.00 0.00 2.52
336 337 4.103943 AGGGTCTTTCTTCAGCTCTCTTTT 59.896 41.667 0.00 0.00 0.00 2.27
337 338 4.454161 GGGTCTTTCTTCAGCTCTCTTTTC 59.546 45.833 0.00 0.00 0.00 2.29
338 339 5.304778 GGTCTTTCTTCAGCTCTCTTTTCT 58.695 41.667 0.00 0.00 0.00 2.52
339 340 6.459923 GGTCTTTCTTCAGCTCTCTTTTCTA 58.540 40.000 0.00 0.00 0.00 2.10
340 341 6.589907 GGTCTTTCTTCAGCTCTCTTTTCTAG 59.410 42.308 0.00 0.00 0.00 2.43
341 342 7.375053 GTCTTTCTTCAGCTCTCTTTTCTAGA 58.625 38.462 0.00 0.00 0.00 2.43
342 343 8.034804 GTCTTTCTTCAGCTCTCTTTTCTAGAT 58.965 37.037 0.00 0.00 30.92 1.98
343 344 9.249053 TCTTTCTTCAGCTCTCTTTTCTAGATA 57.751 33.333 0.00 0.00 30.92 1.98
344 345 9.301153 CTTTCTTCAGCTCTCTTTTCTAGATAC 57.699 37.037 0.00 0.00 30.92 2.24
345 346 8.588290 TTCTTCAGCTCTCTTTTCTAGATACT 57.412 34.615 0.00 0.00 30.92 2.12
346 347 7.995289 TCTTCAGCTCTCTTTTCTAGATACTG 58.005 38.462 0.00 0.00 32.43 2.74
347 348 6.142818 TCAGCTCTCTTTTCTAGATACTGC 57.857 41.667 0.00 0.00 31.78 4.40
348 349 5.890985 TCAGCTCTCTTTTCTAGATACTGCT 59.109 40.000 0.00 0.00 31.78 4.24
349 350 5.978919 CAGCTCTCTTTTCTAGATACTGCTG 59.021 44.000 0.00 4.49 36.39 4.41
350 351 4.744631 GCTCTCTTTTCTAGATACTGCTGC 59.255 45.833 0.00 0.00 30.92 5.25
351 352 5.451798 GCTCTCTTTTCTAGATACTGCTGCT 60.452 44.000 0.00 0.00 30.92 4.24
352 353 6.238897 GCTCTCTTTTCTAGATACTGCTGCTA 60.239 42.308 0.00 0.00 30.92 3.49
353 354 7.033530 TCTCTTTTCTAGATACTGCTGCTAC 57.966 40.000 0.00 0.00 30.92 3.58
354 355 6.831353 TCTCTTTTCTAGATACTGCTGCTACT 59.169 38.462 0.00 0.00 30.92 2.57
355 356 7.012894 TCTCTTTTCTAGATACTGCTGCTACTC 59.987 40.741 0.00 0.00 30.92 2.59
356 357 5.776173 TTTCTAGATACTGCTGCTACTCC 57.224 43.478 0.00 0.00 0.00 3.85
357 358 4.715534 TCTAGATACTGCTGCTACTCCT 57.284 45.455 0.00 0.00 0.00 3.69
358 359 4.647611 TCTAGATACTGCTGCTACTCCTC 58.352 47.826 0.00 0.00 0.00 3.71
359 360 3.593442 AGATACTGCTGCTACTCCTCT 57.407 47.619 0.00 0.00 0.00 3.69
360 361 3.486383 AGATACTGCTGCTACTCCTCTC 58.514 50.000 0.00 0.00 0.00 3.20
361 362 3.138283 AGATACTGCTGCTACTCCTCTCT 59.862 47.826 0.00 0.00 0.00 3.10
362 363 4.349636 AGATACTGCTGCTACTCCTCTCTA 59.650 45.833 0.00 0.00 0.00 2.43
363 364 3.593442 ACTGCTGCTACTCCTCTCTAT 57.407 47.619 0.00 0.00 0.00 1.98
364 365 4.715534 ACTGCTGCTACTCCTCTCTATA 57.284 45.455 0.00 0.00 0.00 1.31
365 366 5.255397 ACTGCTGCTACTCCTCTCTATAT 57.745 43.478 0.00 0.00 0.00 0.86
366 367 5.253330 ACTGCTGCTACTCCTCTCTATATC 58.747 45.833 0.00 0.00 0.00 1.63
367 368 5.014123 ACTGCTGCTACTCCTCTCTATATCT 59.986 44.000 0.00 0.00 0.00 1.98
368 369 5.886609 TGCTGCTACTCCTCTCTATATCTT 58.113 41.667 0.00 0.00 0.00 2.40
369 370 5.943416 TGCTGCTACTCCTCTCTATATCTTC 59.057 44.000 0.00 0.00 0.00 2.87
370 371 5.943416 GCTGCTACTCCTCTCTATATCTTCA 59.057 44.000 0.00 0.00 0.00 3.02
371 372 6.094048 GCTGCTACTCCTCTCTATATCTTCAG 59.906 46.154 0.00 0.00 0.00 3.02
372 373 7.085476 TGCTACTCCTCTCTATATCTTCAGT 57.915 40.000 0.00 0.00 0.00 3.41
373 374 8.208575 TGCTACTCCTCTCTATATCTTCAGTA 57.791 38.462 0.00 0.00 0.00 2.74
374 375 8.318412 TGCTACTCCTCTCTATATCTTCAGTAG 58.682 40.741 0.00 0.00 35.78 2.57
375 376 8.537016 GCTACTCCTCTCTATATCTTCAGTAGA 58.463 40.741 6.49 0.00 35.01 2.59
378 379 9.338968 ACTCCTCTCTATATCTTCAGTAGATCT 57.661 37.037 0.00 0.00 42.69 2.75
406 407 9.622004 TGTAATTCTCTTTGTACTTTCTCTACG 57.378 33.333 0.00 0.00 0.00 3.51
407 408 9.837525 GTAATTCTCTTTGTACTTTCTCTACGA 57.162 33.333 0.00 0.00 0.00 3.43
408 409 8.973835 AATTCTCTTTGTACTTTCTCTACGAG 57.026 34.615 0.00 0.00 0.00 4.18
409 410 5.940595 TCTCTTTGTACTTTCTCTACGAGC 58.059 41.667 0.00 0.00 0.00 5.03
410 411 5.706369 TCTCTTTGTACTTTCTCTACGAGCT 59.294 40.000 0.00 0.00 0.00 4.09
411 412 5.700846 TCTTTGTACTTTCTCTACGAGCTG 58.299 41.667 0.00 0.00 0.00 4.24
412 413 5.472478 TCTTTGTACTTTCTCTACGAGCTGA 59.528 40.000 0.00 0.00 0.00 4.26
413 414 5.700722 TTGTACTTTCTCTACGAGCTGAA 57.299 39.130 0.00 0.00 0.00 3.02
414 415 5.899120 TGTACTTTCTCTACGAGCTGAAT 57.101 39.130 0.00 0.00 0.00 2.57
415 416 5.641709 TGTACTTTCTCTACGAGCTGAATG 58.358 41.667 0.00 0.00 0.00 2.67
416 417 5.414765 TGTACTTTCTCTACGAGCTGAATGA 59.585 40.000 0.00 0.00 0.00 2.57
417 418 5.392767 ACTTTCTCTACGAGCTGAATGAA 57.607 39.130 0.00 0.00 0.00 2.57
418 419 5.971763 ACTTTCTCTACGAGCTGAATGAAT 58.028 37.500 0.00 0.00 0.00 2.57
419 420 6.402222 ACTTTCTCTACGAGCTGAATGAATT 58.598 36.000 0.00 0.00 0.00 2.17
420 421 6.876257 ACTTTCTCTACGAGCTGAATGAATTT 59.124 34.615 0.00 0.00 0.00 1.82
421 422 6.653273 TTCTCTACGAGCTGAATGAATTTG 57.347 37.500 0.00 0.00 0.00 2.32
422 423 5.111989 TCTCTACGAGCTGAATGAATTTGG 58.888 41.667 0.00 0.00 0.00 3.28
423 424 2.927553 ACGAGCTGAATGAATTTGGC 57.072 45.000 0.00 0.00 0.00 4.52
424 425 2.161855 ACGAGCTGAATGAATTTGGCA 58.838 42.857 0.00 0.00 0.00 4.92
425 426 2.095059 ACGAGCTGAATGAATTTGGCAC 60.095 45.455 0.00 0.00 0.00 5.01
426 427 2.163010 CGAGCTGAATGAATTTGGCACT 59.837 45.455 0.00 0.00 0.00 4.40
427 428 3.366679 CGAGCTGAATGAATTTGGCACTT 60.367 43.478 0.00 0.00 0.00 3.16
428 429 4.171754 GAGCTGAATGAATTTGGCACTTC 58.828 43.478 0.00 0.00 0.00 3.01
429 430 3.056322 AGCTGAATGAATTTGGCACTTCC 60.056 43.478 6.54 0.00 0.00 3.46
430 431 3.306225 GCTGAATGAATTTGGCACTTCCA 60.306 43.478 6.54 0.00 44.85 3.53
431 432 4.622220 GCTGAATGAATTTGGCACTTCCAT 60.622 41.667 6.54 0.00 46.04 3.41
432 433 4.823157 TGAATGAATTTGGCACTTCCATG 58.177 39.130 6.54 0.00 46.04 3.66
433 434 2.747396 TGAATTTGGCACTTCCATGC 57.253 45.000 6.54 0.00 46.04 4.06
442 443 2.680577 GCACTTCCATGCCTTTTCTTG 58.319 47.619 0.00 0.00 39.86 3.02
443 444 2.036346 GCACTTCCATGCCTTTTCTTGT 59.964 45.455 0.00 0.00 39.86 3.16
444 445 3.493176 GCACTTCCATGCCTTTTCTTGTT 60.493 43.478 0.00 0.00 39.86 2.83
445 446 4.261994 GCACTTCCATGCCTTTTCTTGTTA 60.262 41.667 0.00 0.00 39.86 2.41
446 447 5.738783 GCACTTCCATGCCTTTTCTTGTTAA 60.739 40.000 0.00 0.00 39.86 2.01
447 448 6.279882 CACTTCCATGCCTTTTCTTGTTAAA 58.720 36.000 0.00 0.00 0.00 1.52
448 449 6.760770 CACTTCCATGCCTTTTCTTGTTAAAA 59.239 34.615 0.00 0.00 0.00 1.52
449 450 7.279758 CACTTCCATGCCTTTTCTTGTTAAAAA 59.720 33.333 0.00 0.00 0.00 1.94
496 497 9.220635 GAACATTTTTAAAATTTGTGAACAGGC 57.779 29.630 14.35 0.00 0.00 4.85
497 498 7.405769 ACATTTTTAAAATTTGTGAACAGGCG 58.594 30.769 13.35 0.00 0.00 5.52
498 499 5.975410 TTTTAAAATTTGTGAACAGGCGG 57.025 34.783 0.00 0.00 0.00 6.13
499 500 1.864565 AAAATTTGTGAACAGGCGGC 58.135 45.000 0.00 0.00 0.00 6.53
500 501 0.749649 AAATTTGTGAACAGGCGGCA 59.250 45.000 13.08 0.00 0.00 5.69
501 502 0.968405 AATTTGTGAACAGGCGGCAT 59.032 45.000 13.08 0.00 0.00 4.40
502 503 0.527565 ATTTGTGAACAGGCGGCATC 59.472 50.000 13.08 7.13 0.00 3.91
503 504 1.523154 TTTGTGAACAGGCGGCATCC 61.523 55.000 13.08 0.00 0.00 3.51
504 505 3.134127 GTGAACAGGCGGCATCCC 61.134 66.667 13.08 0.00 0.00 3.85
515 516 3.520862 GCATCCCGGCCACACATG 61.521 66.667 2.24 0.00 0.00 3.21
534 535 4.168291 GCCGGCCCAGAAGAGGAG 62.168 72.222 18.11 0.00 0.00 3.69
535 536 4.168291 CCGGCCCAGAAGAGGAGC 62.168 72.222 0.00 0.00 0.00 4.70
536 537 4.521062 CGGCCCAGAAGAGGAGCG 62.521 72.222 0.00 0.00 0.00 5.03
537 538 4.168291 GGCCCAGAAGAGGAGCGG 62.168 72.222 0.00 0.00 0.00 5.52
538 539 4.168291 GCCCAGAAGAGGAGCGGG 62.168 72.222 0.00 0.00 40.11 6.13
539 540 3.474570 CCCAGAAGAGGAGCGGGG 61.475 72.222 0.00 0.00 32.88 5.73
540 541 3.474570 CCAGAAGAGGAGCGGGGG 61.475 72.222 0.00 0.00 0.00 5.40
712 714 1.841556 GTGTCCACCTCCACCTCCA 60.842 63.158 0.00 0.00 0.00 3.86
713 715 1.841556 TGTCCACCTCCACCTCCAC 60.842 63.158 0.00 0.00 0.00 4.02
758 760 6.049149 TCGATCCTTTATAAGCAACAAGAGG 58.951 40.000 0.00 0.00 0.00 3.69
839 876 3.066814 GGACCGACTGCTACCCGT 61.067 66.667 0.00 0.00 0.00 5.28
1022 1059 4.457834 TGGAACTCTCGGAATTCTTCTC 57.542 45.455 5.23 0.00 0.00 2.87
1057 1094 4.214383 CGGCAATCTCACGCAGCG 62.214 66.667 14.82 14.82 0.00 5.18
1606 1652 6.350949 CCGTCAAGTTTATTTGGGGAAATCAT 60.351 38.462 0.00 0.00 0.00 2.45
2017 2099 4.479158 AGAAAAGCTAAACCCAATGACCA 58.521 39.130 0.00 0.00 0.00 4.02
2192 2274 3.628008 ACGGACATGGAGTATCTACACA 58.372 45.455 0.00 0.00 33.73 3.72
2228 2310 5.007724 GCTCCCTTATGAACAGTAAAATCGG 59.992 44.000 0.00 0.00 0.00 4.18
2805 2890 1.338674 CCCTGTATGCACACCGAGAAA 60.339 52.381 0.00 0.00 0.00 2.52
2823 2908 6.038271 CCGAGAAAGAACATTTAGGTTATGGG 59.962 42.308 0.00 0.00 0.00 4.00
2840 2925 6.324819 GTTATGGGTTTCATCATGTGTGAAG 58.675 40.000 13.27 0.00 38.01 3.02
2947 3032 3.695830 TTAGGTTCTGAGTTTCGCCAT 57.304 42.857 0.00 0.00 0.00 4.40
3044 3129 6.739331 TTTAGATCATGGGTTTTGTTTGGT 57.261 33.333 0.00 0.00 0.00 3.67
3067 3152 1.500396 GCACGTTAAAGAAGGCCCG 59.500 57.895 0.00 0.00 0.00 6.13
3068 3153 1.500396 CACGTTAAAGAAGGCCCGC 59.500 57.895 0.00 0.00 0.00 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 1.757682 AGTACAGAGAGAAGGCGGAG 58.242 55.000 0.00 0.00 0.00 4.63
12 13 3.215151 CATAGTACAGAGAGAAGGCGGA 58.785 50.000 0.00 0.00 0.00 5.54
13 14 2.952978 ACATAGTACAGAGAGAAGGCGG 59.047 50.000 0.00 0.00 0.00 6.13
14 15 3.378742 ACACATAGTACAGAGAGAAGGCG 59.621 47.826 0.00 0.00 0.00 5.52
15 16 4.993029 ACACATAGTACAGAGAGAAGGC 57.007 45.455 0.00 0.00 0.00 4.35
16 17 6.096036 CACAACACATAGTACAGAGAGAAGG 58.904 44.000 0.00 0.00 0.00 3.46
17 18 5.574830 GCACAACACATAGTACAGAGAGAAG 59.425 44.000 0.00 0.00 0.00 2.85
18 19 5.243954 AGCACAACACATAGTACAGAGAGAA 59.756 40.000 0.00 0.00 0.00 2.87
19 20 4.767409 AGCACAACACATAGTACAGAGAGA 59.233 41.667 0.00 0.00 0.00 3.10
20 21 5.065704 AGCACAACACATAGTACAGAGAG 57.934 43.478 0.00 0.00 0.00 3.20
21 22 5.230182 CAAGCACAACACATAGTACAGAGA 58.770 41.667 0.00 0.00 0.00 3.10
22 23 4.389992 CCAAGCACAACACATAGTACAGAG 59.610 45.833 0.00 0.00 0.00 3.35
23 24 4.202315 ACCAAGCACAACACATAGTACAGA 60.202 41.667 0.00 0.00 0.00 3.41
24 25 4.065088 ACCAAGCACAACACATAGTACAG 58.935 43.478 0.00 0.00 0.00 2.74
25 26 4.079980 ACCAAGCACAACACATAGTACA 57.920 40.909 0.00 0.00 0.00 2.90
26 27 5.432885 AAACCAAGCACAACACATAGTAC 57.567 39.130 0.00 0.00 0.00 2.73
27 28 6.458232 AAAAACCAAGCACAACACATAGTA 57.542 33.333 0.00 0.00 0.00 1.82
28 29 5.337578 AAAAACCAAGCACAACACATAGT 57.662 34.783 0.00 0.00 0.00 2.12
29 30 7.148983 CGAATAAAAACCAAGCACAACACATAG 60.149 37.037 0.00 0.00 0.00 2.23
30 31 6.638873 CGAATAAAAACCAAGCACAACACATA 59.361 34.615 0.00 0.00 0.00 2.29
31 32 5.461737 CGAATAAAAACCAAGCACAACACAT 59.538 36.000 0.00 0.00 0.00 3.21
32 33 4.800993 CGAATAAAAACCAAGCACAACACA 59.199 37.500 0.00 0.00 0.00 3.72
33 34 4.801516 ACGAATAAAAACCAAGCACAACAC 59.198 37.500 0.00 0.00 0.00 3.32
34 35 5.000012 ACGAATAAAAACCAAGCACAACA 58.000 34.783 0.00 0.00 0.00 3.33
35 36 5.959652 AACGAATAAAAACCAAGCACAAC 57.040 34.783 0.00 0.00 0.00 3.32
36 37 5.220491 GCAAACGAATAAAAACCAAGCACAA 60.220 36.000 0.00 0.00 0.00 3.33
37 38 4.268884 GCAAACGAATAAAAACCAAGCACA 59.731 37.500 0.00 0.00 0.00 4.57
38 39 4.268884 TGCAAACGAATAAAAACCAAGCAC 59.731 37.500 0.00 0.00 0.00 4.40
39 40 4.433615 TGCAAACGAATAAAAACCAAGCA 58.566 34.783 0.00 0.00 0.00 3.91
40 41 4.742659 TCTGCAAACGAATAAAAACCAAGC 59.257 37.500 0.00 0.00 0.00 4.01
41 42 6.863126 AGATCTGCAAACGAATAAAAACCAAG 59.137 34.615 0.00 0.00 0.00 3.61
42 43 6.744112 AGATCTGCAAACGAATAAAAACCAA 58.256 32.000 0.00 0.00 0.00 3.67
43 44 6.325919 AGATCTGCAAACGAATAAAAACCA 57.674 33.333 0.00 0.00 0.00 3.67
44 45 7.359181 CCAAAGATCTGCAAACGAATAAAAACC 60.359 37.037 0.00 0.00 0.00 3.27
45 46 7.381139 TCCAAAGATCTGCAAACGAATAAAAAC 59.619 33.333 0.00 0.00 0.00 2.43
46 47 7.429633 TCCAAAGATCTGCAAACGAATAAAAA 58.570 30.769 0.00 0.00 0.00 1.94
47 48 6.976088 TCCAAAGATCTGCAAACGAATAAAA 58.024 32.000 0.00 0.00 0.00 1.52
48 49 6.206634 ACTCCAAAGATCTGCAAACGAATAAA 59.793 34.615 0.00 0.00 0.00 1.40
49 50 5.705441 ACTCCAAAGATCTGCAAACGAATAA 59.295 36.000 0.00 0.00 0.00 1.40
50 51 5.245531 ACTCCAAAGATCTGCAAACGAATA 58.754 37.500 0.00 0.00 0.00 1.75
51 52 4.074970 ACTCCAAAGATCTGCAAACGAAT 58.925 39.130 0.00 0.00 0.00 3.34
52 53 3.476552 ACTCCAAAGATCTGCAAACGAA 58.523 40.909 0.00 0.00 0.00 3.85
53 54 3.126001 ACTCCAAAGATCTGCAAACGA 57.874 42.857 0.00 0.00 0.00 3.85
54 55 3.904136 AACTCCAAAGATCTGCAAACG 57.096 42.857 0.00 0.00 0.00 3.60
55 56 5.186996 TCAAACTCCAAAGATCTGCAAAC 57.813 39.130 0.00 0.00 0.00 2.93
56 57 5.775686 CATCAAACTCCAAAGATCTGCAAA 58.224 37.500 0.00 0.00 0.00 3.68
57 58 4.321452 GCATCAAACTCCAAAGATCTGCAA 60.321 41.667 0.00 0.00 0.00 4.08
58 59 3.192001 GCATCAAACTCCAAAGATCTGCA 59.808 43.478 0.00 0.00 0.00 4.41
59 60 3.442977 AGCATCAAACTCCAAAGATCTGC 59.557 43.478 0.00 0.00 0.00 4.26
60 61 6.939132 ATAGCATCAAACTCCAAAGATCTG 57.061 37.500 0.00 0.00 0.00 2.90
61 62 7.601886 CGATATAGCATCAAACTCCAAAGATCT 59.398 37.037 0.00 0.00 0.00 2.75
62 63 7.623089 GCGATATAGCATCAAACTCCAAAGATC 60.623 40.741 2.59 0.00 37.05 2.75
63 64 6.148480 GCGATATAGCATCAAACTCCAAAGAT 59.852 38.462 2.59 0.00 37.05 2.40
64 65 5.466728 GCGATATAGCATCAAACTCCAAAGA 59.533 40.000 2.59 0.00 37.05 2.52
65 66 5.613360 CGCGATATAGCATCAAACTCCAAAG 60.613 44.000 0.00 0.00 36.85 2.77
66 67 4.211164 CGCGATATAGCATCAAACTCCAAA 59.789 41.667 0.00 0.00 36.85 3.28
67 68 3.740832 CGCGATATAGCATCAAACTCCAA 59.259 43.478 0.00 0.00 36.85 3.53
68 69 3.005367 TCGCGATATAGCATCAAACTCCA 59.995 43.478 3.71 0.00 36.85 3.86
69 70 3.575630 TCGCGATATAGCATCAAACTCC 58.424 45.455 3.71 0.00 36.85 3.85
70 71 4.433544 GCTTCGCGATATAGCATCAAACTC 60.434 45.833 22.80 0.00 36.85 3.01
71 72 3.430218 GCTTCGCGATATAGCATCAAACT 59.570 43.478 22.80 0.00 36.85 2.66
72 73 3.430218 AGCTTCGCGATATAGCATCAAAC 59.570 43.478 27.60 2.62 37.37 2.93
73 74 3.429881 CAGCTTCGCGATATAGCATCAAA 59.570 43.478 27.60 1.50 37.37 2.69
74 75 2.989166 CAGCTTCGCGATATAGCATCAA 59.011 45.455 27.60 2.02 37.37 2.57
75 76 2.599659 CAGCTTCGCGATATAGCATCA 58.400 47.619 27.60 2.75 37.37 3.07
76 77 1.923204 CCAGCTTCGCGATATAGCATC 59.077 52.381 27.60 1.75 37.37 3.91
77 78 1.546029 TCCAGCTTCGCGATATAGCAT 59.454 47.619 27.60 13.56 37.37 3.79
78 79 0.958822 TCCAGCTTCGCGATATAGCA 59.041 50.000 27.60 9.37 37.37 3.49
79 80 1.068194 ACTCCAGCTTCGCGATATAGC 60.068 52.381 20.79 20.79 35.16 2.97
80 81 2.999507 ACTCCAGCTTCGCGATATAG 57.000 50.000 10.88 5.64 0.00 1.31
81 82 3.143728 TGTACTCCAGCTTCGCGATATA 58.856 45.455 10.88 0.00 0.00 0.86
82 83 1.954382 TGTACTCCAGCTTCGCGATAT 59.046 47.619 10.88 0.00 0.00 1.63
83 84 1.385528 TGTACTCCAGCTTCGCGATA 58.614 50.000 10.88 0.00 0.00 2.92
84 85 0.747255 ATGTACTCCAGCTTCGCGAT 59.253 50.000 10.88 0.00 0.00 4.58
85 86 0.100682 GATGTACTCCAGCTTCGCGA 59.899 55.000 3.71 3.71 0.00 5.87
86 87 0.179137 TGATGTACTCCAGCTTCGCG 60.179 55.000 0.00 0.00 0.00 5.87
87 88 2.010145 TTGATGTACTCCAGCTTCGC 57.990 50.000 0.00 0.00 0.00 4.70
88 89 4.872691 AGAAATTGATGTACTCCAGCTTCG 59.127 41.667 0.00 0.00 0.00 3.79
89 90 6.749923 AAGAAATTGATGTACTCCAGCTTC 57.250 37.500 0.00 0.13 0.00 3.86
90 91 8.814038 AATAAGAAATTGATGTACTCCAGCTT 57.186 30.769 0.00 0.00 0.00 3.74
91 92 8.814038 AAATAAGAAATTGATGTACTCCAGCT 57.186 30.769 0.00 0.00 0.00 4.24
92 93 9.294030 CAAAATAAGAAATTGATGTACTCCAGC 57.706 33.333 0.00 0.00 0.00 4.85
93 94 9.294030 GCAAAATAAGAAATTGATGTACTCCAG 57.706 33.333 0.00 0.00 0.00 3.86
94 95 8.801299 TGCAAAATAAGAAATTGATGTACTCCA 58.199 29.630 0.00 0.00 0.00 3.86
95 96 9.294030 CTGCAAAATAAGAAATTGATGTACTCC 57.706 33.333 0.00 0.00 0.00 3.85
96 97 9.294030 CCTGCAAAATAAGAAATTGATGTACTC 57.706 33.333 0.00 0.00 0.00 2.59
97 98 8.253113 CCCTGCAAAATAAGAAATTGATGTACT 58.747 33.333 0.00 0.00 0.00 2.73
98 99 8.034804 ACCCTGCAAAATAAGAAATTGATGTAC 58.965 33.333 0.00 0.00 0.00 2.90
99 100 8.133024 ACCCTGCAAAATAAGAAATTGATGTA 57.867 30.769 0.00 0.00 0.00 2.29
100 101 7.008021 ACCCTGCAAAATAAGAAATTGATGT 57.992 32.000 0.00 0.00 0.00 3.06
101 102 7.910441 AACCCTGCAAAATAAGAAATTGATG 57.090 32.000 0.00 0.00 0.00 3.07
102 103 8.922931 AAAACCCTGCAAAATAAGAAATTGAT 57.077 26.923 0.00 0.00 0.00 2.57
103 104 7.989741 TGAAAACCCTGCAAAATAAGAAATTGA 59.010 29.630 0.00 0.00 0.00 2.57
104 105 8.152309 TGAAAACCCTGCAAAATAAGAAATTG 57.848 30.769 0.00 0.00 0.00 2.32
105 106 8.922931 ATGAAAACCCTGCAAAATAAGAAATT 57.077 26.923 0.00 0.00 0.00 1.82
106 107 8.377799 AGATGAAAACCCTGCAAAATAAGAAAT 58.622 29.630 0.00 0.00 0.00 2.17
107 108 7.734942 AGATGAAAACCCTGCAAAATAAGAAA 58.265 30.769 0.00 0.00 0.00 2.52
108 109 7.301868 AGATGAAAACCCTGCAAAATAAGAA 57.698 32.000 0.00 0.00 0.00 2.52
109 110 6.916360 AGATGAAAACCCTGCAAAATAAGA 57.084 33.333 0.00 0.00 0.00 2.10
110 111 6.369615 CCAAGATGAAAACCCTGCAAAATAAG 59.630 38.462 0.00 0.00 0.00 1.73
111 112 6.183361 ACCAAGATGAAAACCCTGCAAAATAA 60.183 34.615 0.00 0.00 0.00 1.40
112 113 5.306678 ACCAAGATGAAAACCCTGCAAAATA 59.693 36.000 0.00 0.00 0.00 1.40
113 114 4.102996 ACCAAGATGAAAACCCTGCAAAAT 59.897 37.500 0.00 0.00 0.00 1.82
114 115 3.454082 ACCAAGATGAAAACCCTGCAAAA 59.546 39.130 0.00 0.00 0.00 2.44
115 116 3.037549 ACCAAGATGAAAACCCTGCAAA 58.962 40.909 0.00 0.00 0.00 3.68
116 117 2.676748 ACCAAGATGAAAACCCTGCAA 58.323 42.857 0.00 0.00 0.00 4.08
117 118 2.364970 CAACCAAGATGAAAACCCTGCA 59.635 45.455 0.00 0.00 0.00 4.41
118 119 2.867647 GCAACCAAGATGAAAACCCTGC 60.868 50.000 0.00 0.00 0.00 4.85
119 120 2.364970 TGCAACCAAGATGAAAACCCTG 59.635 45.455 0.00 0.00 0.00 4.45
120 121 2.629617 CTGCAACCAAGATGAAAACCCT 59.370 45.455 0.00 0.00 0.00 4.34
121 122 2.627699 TCTGCAACCAAGATGAAAACCC 59.372 45.455 0.00 0.00 0.00 4.11
122 123 4.240096 CATCTGCAACCAAGATGAAAACC 58.760 43.478 6.99 0.00 41.20 3.27
123 124 4.874970 ACATCTGCAACCAAGATGAAAAC 58.125 39.130 17.09 0.00 41.20 2.43
124 125 6.839124 ATACATCTGCAACCAAGATGAAAA 57.161 33.333 17.09 5.31 41.20 2.29
125 126 6.839124 AATACATCTGCAACCAAGATGAAA 57.161 33.333 17.09 7.28 41.20 2.69
126 127 6.839124 AAATACATCTGCAACCAAGATGAA 57.161 33.333 17.09 0.00 41.20 2.57
127 128 6.623486 CAAAATACATCTGCAACCAAGATGA 58.377 36.000 17.09 4.42 41.20 2.92
128 129 5.290158 GCAAAATACATCTGCAACCAAGATG 59.710 40.000 10.44 10.44 43.47 2.90
129 130 5.186409 AGCAAAATACATCTGCAACCAAGAT 59.814 36.000 0.00 0.00 38.58 2.40
130 131 4.523943 AGCAAAATACATCTGCAACCAAGA 59.476 37.500 0.00 0.00 38.58 3.02
131 132 4.624024 CAGCAAAATACATCTGCAACCAAG 59.376 41.667 0.00 0.00 38.58 3.61
132 133 4.039004 ACAGCAAAATACATCTGCAACCAA 59.961 37.500 0.00 0.00 38.58 3.67
133 134 3.573538 ACAGCAAAATACATCTGCAACCA 59.426 39.130 0.00 0.00 38.58 3.67
134 135 4.178545 ACAGCAAAATACATCTGCAACC 57.821 40.909 0.00 0.00 38.58 3.77
135 136 5.922544 AGAAACAGCAAAATACATCTGCAAC 59.077 36.000 0.00 0.00 38.58 4.17
136 137 6.088016 AGAAACAGCAAAATACATCTGCAA 57.912 33.333 0.00 0.00 38.58 4.08
137 138 5.710513 AGAAACAGCAAAATACATCTGCA 57.289 34.783 0.00 0.00 38.58 4.41
138 139 6.611381 TGTAGAAACAGCAAAATACATCTGC 58.389 36.000 0.00 0.00 36.29 4.26
153 154 4.641396 CATGTCAAGGTCCTGTAGAAACA 58.359 43.478 0.00 0.00 0.00 2.83
154 155 3.437049 GCATGTCAAGGTCCTGTAGAAAC 59.563 47.826 0.00 0.00 0.00 2.78
155 156 3.327757 AGCATGTCAAGGTCCTGTAGAAA 59.672 43.478 0.00 0.00 0.00 2.52
156 157 2.906389 AGCATGTCAAGGTCCTGTAGAA 59.094 45.455 0.00 0.00 0.00 2.10
157 158 2.540383 AGCATGTCAAGGTCCTGTAGA 58.460 47.619 0.00 0.00 0.00 2.59
158 159 3.005554 CAAGCATGTCAAGGTCCTGTAG 58.994 50.000 0.00 0.00 0.00 2.74
159 160 2.875672 GCAAGCATGTCAAGGTCCTGTA 60.876 50.000 0.00 0.00 0.00 2.74
160 161 1.901591 CAAGCATGTCAAGGTCCTGT 58.098 50.000 0.00 0.00 0.00 4.00
161 162 0.524862 GCAAGCATGTCAAGGTCCTG 59.475 55.000 0.00 0.00 0.00 3.86
162 163 0.403271 AGCAAGCATGTCAAGGTCCT 59.597 50.000 0.00 0.00 0.00 3.85
163 164 1.200948 GAAGCAAGCATGTCAAGGTCC 59.799 52.381 0.00 0.00 0.00 4.46
164 165 1.881973 TGAAGCAAGCATGTCAAGGTC 59.118 47.619 0.00 0.00 0.00 3.85
165 166 1.985473 TGAAGCAAGCATGTCAAGGT 58.015 45.000 0.00 0.00 0.00 3.50
166 167 2.555325 TCTTGAAGCAAGCATGTCAAGG 59.445 45.455 21.98 11.30 40.84 3.61
167 168 3.909776 TCTTGAAGCAAGCATGTCAAG 57.090 42.857 18.92 18.92 40.84 3.02
168 169 4.338964 TCTTTCTTGAAGCAAGCATGTCAA 59.661 37.500 0.00 0.76 40.84 3.18
169 170 3.884693 TCTTTCTTGAAGCAAGCATGTCA 59.115 39.130 0.00 0.00 40.84 3.58
170 171 4.494350 TCTTTCTTGAAGCAAGCATGTC 57.506 40.909 0.00 0.00 40.84 3.06
171 172 4.321750 CCATCTTTCTTGAAGCAAGCATGT 60.322 41.667 0.00 0.00 40.84 3.21
172 173 4.174009 CCATCTTTCTTGAAGCAAGCATG 58.826 43.478 0.00 5.28 40.84 4.06
173 174 3.368116 GCCATCTTTCTTGAAGCAAGCAT 60.368 43.478 0.00 0.00 40.84 3.79
174 175 2.029649 GCCATCTTTCTTGAAGCAAGCA 60.030 45.455 0.00 0.00 40.84 3.91
175 176 2.230750 AGCCATCTTTCTTGAAGCAAGC 59.769 45.455 0.00 0.00 40.84 4.01
176 177 3.504906 TGAGCCATCTTTCTTGAAGCAAG 59.495 43.478 0.00 0.00 42.25 4.01
177 178 3.489355 TGAGCCATCTTTCTTGAAGCAA 58.511 40.909 0.00 0.00 35.24 3.91
178 179 3.144657 TGAGCCATCTTTCTTGAAGCA 57.855 42.857 0.00 0.00 35.24 3.91
179 180 3.693085 TGATGAGCCATCTTTCTTGAAGC 59.307 43.478 13.94 0.00 41.06 3.86
180 181 4.942483 ACTGATGAGCCATCTTTCTTGAAG 59.058 41.667 13.94 0.00 41.06 3.02
181 182 4.914983 ACTGATGAGCCATCTTTCTTGAA 58.085 39.130 13.94 0.00 41.06 2.69
182 183 4.564782 ACTGATGAGCCATCTTTCTTGA 57.435 40.909 13.94 0.00 41.06 3.02
183 184 5.293814 CACTACTGATGAGCCATCTTTCTTG 59.706 44.000 13.94 5.21 41.06 3.02
184 185 5.188555 TCACTACTGATGAGCCATCTTTCTT 59.811 40.000 13.94 0.94 41.06 2.52
185 186 4.713814 TCACTACTGATGAGCCATCTTTCT 59.286 41.667 13.94 0.86 41.06 2.52
186 187 5.016051 TCACTACTGATGAGCCATCTTTC 57.984 43.478 13.94 0.00 41.06 2.62
187 188 5.426504 CTTCACTACTGATGAGCCATCTTT 58.573 41.667 13.94 5.87 41.06 2.52
188 189 4.682859 GCTTCACTACTGATGAGCCATCTT 60.683 45.833 13.94 6.13 41.06 2.40
189 190 3.181467 GCTTCACTACTGATGAGCCATCT 60.181 47.826 13.94 1.22 41.06 2.90
190 191 3.129871 GCTTCACTACTGATGAGCCATC 58.870 50.000 7.90 7.90 40.88 3.51
191 192 2.502947 TGCTTCACTACTGATGAGCCAT 59.497 45.455 0.00 0.00 0.00 4.40
192 193 1.901833 TGCTTCACTACTGATGAGCCA 59.098 47.619 0.00 0.00 0.00 4.75
193 194 2.680312 TGCTTCACTACTGATGAGCC 57.320 50.000 0.00 0.00 0.00 4.70
194 195 4.142730 CCTTTTGCTTCACTACTGATGAGC 60.143 45.833 0.00 0.00 0.00 4.26
195 196 4.142730 GCCTTTTGCTTCACTACTGATGAG 60.143 45.833 0.00 0.00 36.87 2.90
196 197 3.753272 GCCTTTTGCTTCACTACTGATGA 59.247 43.478 0.00 0.00 36.87 2.92
197 198 3.503363 TGCCTTTTGCTTCACTACTGATG 59.497 43.478 0.00 0.00 42.00 3.07
198 199 3.754965 TGCCTTTTGCTTCACTACTGAT 58.245 40.909 0.00 0.00 42.00 2.90
199 200 3.207265 TGCCTTTTGCTTCACTACTGA 57.793 42.857 0.00 0.00 42.00 3.41
200 201 3.066621 TGTTGCCTTTTGCTTCACTACTG 59.933 43.478 0.00 0.00 42.00 2.74
201 202 3.287222 TGTTGCCTTTTGCTTCACTACT 58.713 40.909 0.00 0.00 42.00 2.57
202 203 3.632189 CTGTTGCCTTTTGCTTCACTAC 58.368 45.455 0.00 0.00 42.00 2.73
203 204 2.034558 GCTGTTGCCTTTTGCTTCACTA 59.965 45.455 0.00 0.00 42.00 2.74
204 205 1.202452 GCTGTTGCCTTTTGCTTCACT 60.202 47.619 0.00 0.00 42.00 3.41
205 206 1.211743 GCTGTTGCCTTTTGCTTCAC 58.788 50.000 0.00 0.00 42.00 3.18
206 207 0.822811 TGCTGTTGCCTTTTGCTTCA 59.177 45.000 0.00 0.00 42.00 3.02
207 208 1.594397 GTTGCTGTTGCCTTTTGCTTC 59.406 47.619 0.00 0.00 42.00 3.86
208 209 1.207811 AGTTGCTGTTGCCTTTTGCTT 59.792 42.857 0.00 0.00 42.00 3.91
209 210 0.826062 AGTTGCTGTTGCCTTTTGCT 59.174 45.000 0.00 0.00 42.00 3.91
210 211 1.594397 GAAGTTGCTGTTGCCTTTTGC 59.406 47.619 0.00 0.00 38.71 3.68
211 212 3.169355 AGAAGTTGCTGTTGCCTTTTG 57.831 42.857 0.00 0.00 38.71 2.44
212 213 3.954258 ACTAGAAGTTGCTGTTGCCTTTT 59.046 39.130 0.00 0.00 38.71 2.27
213 214 3.555966 ACTAGAAGTTGCTGTTGCCTTT 58.444 40.909 0.00 0.00 38.71 3.11
214 215 3.214696 ACTAGAAGTTGCTGTTGCCTT 57.785 42.857 0.00 0.00 38.71 4.35
215 216 2.938956 ACTAGAAGTTGCTGTTGCCT 57.061 45.000 0.00 0.00 38.71 4.75
216 217 3.315191 TGAAACTAGAAGTTGCTGTTGCC 59.685 43.478 0.00 0.00 38.66 4.52
217 218 4.273480 TCTGAAACTAGAAGTTGCTGTTGC 59.727 41.667 0.00 0.00 38.66 4.17
218 219 5.991328 TCTGAAACTAGAAGTTGCTGTTG 57.009 39.130 0.00 0.00 38.66 3.33
219 220 6.767902 TGAATCTGAAACTAGAAGTTGCTGTT 59.232 34.615 0.00 0.00 38.66 3.16
220 221 6.291377 TGAATCTGAAACTAGAAGTTGCTGT 58.709 36.000 0.00 0.00 38.66 4.40
221 222 6.648310 TCTGAATCTGAAACTAGAAGTTGCTG 59.352 38.462 0.00 0.00 38.66 4.41
222 223 6.763355 TCTGAATCTGAAACTAGAAGTTGCT 58.237 36.000 0.00 0.00 38.66 3.91
223 224 6.648725 ACTCTGAATCTGAAACTAGAAGTTGC 59.351 38.462 0.00 0.00 38.66 4.17
224 225 7.655328 ACACTCTGAATCTGAAACTAGAAGTTG 59.345 37.037 0.00 0.00 38.66 3.16
225 226 7.731054 ACACTCTGAATCTGAAACTAGAAGTT 58.269 34.615 0.00 0.00 40.80 2.66
226 227 7.296628 ACACTCTGAATCTGAAACTAGAAGT 57.703 36.000 0.00 0.00 0.00 3.01
227 228 7.330700 GGAACACTCTGAATCTGAAACTAGAAG 59.669 40.741 0.00 0.00 0.00 2.85
228 229 7.015682 AGGAACACTCTGAATCTGAAACTAGAA 59.984 37.037 0.00 0.00 0.00 2.10
229 230 6.495181 AGGAACACTCTGAATCTGAAACTAGA 59.505 38.462 0.00 0.00 0.00 2.43
230 231 6.696411 AGGAACACTCTGAATCTGAAACTAG 58.304 40.000 0.00 0.00 0.00 2.57
231 232 6.672266 AGGAACACTCTGAATCTGAAACTA 57.328 37.500 0.00 0.00 0.00 2.24
232 233 5.546526 GAGGAACACTCTGAATCTGAAACT 58.453 41.667 0.00 0.00 43.14 2.66
233 234 5.854431 GAGGAACACTCTGAATCTGAAAC 57.146 43.478 0.00 0.00 43.14 2.78
245 246 3.508012 TCAGAACTAGCAGAGGAACACTC 59.492 47.826 0.00 0.00 46.98 3.51
246 247 3.257127 GTCAGAACTAGCAGAGGAACACT 59.743 47.826 0.00 0.00 0.00 3.55
247 248 3.580731 GTCAGAACTAGCAGAGGAACAC 58.419 50.000 0.00 0.00 0.00 3.32
248 249 2.563179 GGTCAGAACTAGCAGAGGAACA 59.437 50.000 0.00 0.00 0.00 3.18
249 250 2.563179 TGGTCAGAACTAGCAGAGGAAC 59.437 50.000 0.00 0.00 0.00 3.62
250 251 2.889512 TGGTCAGAACTAGCAGAGGAA 58.110 47.619 0.00 0.00 0.00 3.36
251 252 2.604912 TGGTCAGAACTAGCAGAGGA 57.395 50.000 0.00 0.00 0.00 3.71
252 253 2.499289 ACATGGTCAGAACTAGCAGAGG 59.501 50.000 0.00 0.00 0.00 3.69
253 254 3.883830 ACATGGTCAGAACTAGCAGAG 57.116 47.619 0.00 0.00 0.00 3.35
254 255 3.578282 TCAACATGGTCAGAACTAGCAGA 59.422 43.478 0.00 0.00 0.00 4.26
255 256 3.930336 TCAACATGGTCAGAACTAGCAG 58.070 45.455 0.00 0.00 0.00 4.24
256 257 4.020307 TGATCAACATGGTCAGAACTAGCA 60.020 41.667 0.00 0.00 31.53 3.49
257 258 4.507710 TGATCAACATGGTCAGAACTAGC 58.492 43.478 0.00 0.00 31.53 3.42
270 271 4.019411 TGACCACTACACCATGATCAACAT 60.019 41.667 0.00 0.00 40.17 2.71
271 272 3.326297 TGACCACTACACCATGATCAACA 59.674 43.478 0.00 0.00 0.00 3.33
272 273 3.937814 TGACCACTACACCATGATCAAC 58.062 45.455 0.00 0.00 0.00 3.18
273 274 4.842531 ATGACCACTACACCATGATCAA 57.157 40.909 0.00 0.00 0.00 2.57
274 275 4.842531 AATGACCACTACACCATGATCA 57.157 40.909 0.00 0.00 0.00 2.92
275 276 4.576463 GGAAATGACCACTACACCATGATC 59.424 45.833 0.00 0.00 0.00 2.92
276 277 4.018506 TGGAAATGACCACTACACCATGAT 60.019 41.667 0.00 0.00 34.77 2.45
277 278 3.329225 TGGAAATGACCACTACACCATGA 59.671 43.478 0.00 0.00 34.77 3.07
278 279 3.684908 TGGAAATGACCACTACACCATG 58.315 45.455 0.00 0.00 34.77 3.66
288 289 2.238521 GAGGCAAAGTGGAAATGACCA 58.761 47.619 0.00 0.00 37.63 4.02
289 290 2.238521 TGAGGCAAAGTGGAAATGACC 58.761 47.619 0.00 0.00 0.00 4.02
290 291 5.841957 ATATGAGGCAAAGTGGAAATGAC 57.158 39.130 0.00 0.00 0.00 3.06
291 292 6.064060 CCTATATGAGGCAAAGTGGAAATGA 58.936 40.000 0.00 0.00 38.96 2.57
292 293 5.242393 CCCTATATGAGGCAAAGTGGAAATG 59.758 44.000 0.00 0.00 45.17 2.32
293 294 5.103515 ACCCTATATGAGGCAAAGTGGAAAT 60.104 40.000 0.00 0.00 45.17 2.17
294 295 4.229582 ACCCTATATGAGGCAAAGTGGAAA 59.770 41.667 0.00 0.00 45.17 3.13
295 296 3.785887 ACCCTATATGAGGCAAAGTGGAA 59.214 43.478 0.00 0.00 45.17 3.53
296 297 3.391296 GACCCTATATGAGGCAAAGTGGA 59.609 47.826 0.00 0.00 45.17 4.02
297 298 3.392616 AGACCCTATATGAGGCAAAGTGG 59.607 47.826 0.00 0.00 45.17 4.00
298 299 4.696479 AGACCCTATATGAGGCAAAGTG 57.304 45.455 0.00 0.00 45.17 3.16
299 300 5.430089 AGAAAGACCCTATATGAGGCAAAGT 59.570 40.000 0.00 0.00 45.17 2.66
300 301 5.934781 AGAAAGACCCTATATGAGGCAAAG 58.065 41.667 0.00 0.00 45.17 2.77
301 302 5.975988 AGAAAGACCCTATATGAGGCAAA 57.024 39.130 0.00 0.00 45.17 3.68
302 303 5.428457 TGAAGAAAGACCCTATATGAGGCAA 59.572 40.000 0.00 0.00 45.17 4.52
303 304 4.968719 TGAAGAAAGACCCTATATGAGGCA 59.031 41.667 0.00 0.00 45.17 4.75
304 305 5.546526 CTGAAGAAAGACCCTATATGAGGC 58.453 45.833 0.00 0.00 45.17 4.70
305 306 5.306678 AGCTGAAGAAAGACCCTATATGAGG 59.693 44.000 0.00 0.00 46.25 3.86
306 307 6.267471 AGAGCTGAAGAAAGACCCTATATGAG 59.733 42.308 0.00 0.00 0.00 2.90
307 308 6.139671 AGAGCTGAAGAAAGACCCTATATGA 58.860 40.000 0.00 0.00 0.00 2.15
308 309 6.267471 AGAGAGCTGAAGAAAGACCCTATATG 59.733 42.308 0.00 0.00 0.00 1.78
309 310 6.381250 AGAGAGCTGAAGAAAGACCCTATAT 58.619 40.000 0.00 0.00 0.00 0.86
310 311 5.772004 AGAGAGCTGAAGAAAGACCCTATA 58.228 41.667 0.00 0.00 0.00 1.31
311 312 4.619679 AGAGAGCTGAAGAAAGACCCTAT 58.380 43.478 0.00 0.00 0.00 2.57
312 313 4.054359 AGAGAGCTGAAGAAAGACCCTA 57.946 45.455 0.00 0.00 0.00 3.53
313 314 2.901291 AGAGAGCTGAAGAAAGACCCT 58.099 47.619 0.00 0.00 0.00 4.34
314 315 3.694043 AAGAGAGCTGAAGAAAGACCC 57.306 47.619 0.00 0.00 0.00 4.46
315 316 5.304778 AGAAAAGAGAGCTGAAGAAAGACC 58.695 41.667 0.00 0.00 0.00 3.85
316 317 7.375053 TCTAGAAAAGAGAGCTGAAGAAAGAC 58.625 38.462 0.00 0.00 0.00 3.01
317 318 7.531857 TCTAGAAAAGAGAGCTGAAGAAAGA 57.468 36.000 0.00 0.00 0.00 2.52
318 319 9.301153 GTATCTAGAAAAGAGAGCTGAAGAAAG 57.699 37.037 0.00 0.00 37.74 2.62
319 320 9.030452 AGTATCTAGAAAAGAGAGCTGAAGAAA 57.970 33.333 0.00 0.00 37.74 2.52
320 321 8.465999 CAGTATCTAGAAAAGAGAGCTGAAGAA 58.534 37.037 0.00 0.00 37.74 2.52
321 322 7.416213 GCAGTATCTAGAAAAGAGAGCTGAAGA 60.416 40.741 0.00 0.00 37.74 2.87
322 323 6.697019 GCAGTATCTAGAAAAGAGAGCTGAAG 59.303 42.308 0.00 0.00 37.74 3.02
323 324 6.379703 AGCAGTATCTAGAAAAGAGAGCTGAA 59.620 38.462 0.00 0.00 37.74 3.02
324 325 5.890985 AGCAGTATCTAGAAAAGAGAGCTGA 59.109 40.000 0.00 0.00 37.74 4.26
325 326 5.978919 CAGCAGTATCTAGAAAAGAGAGCTG 59.021 44.000 13.54 13.54 39.73 4.24
326 327 5.451798 GCAGCAGTATCTAGAAAAGAGAGCT 60.452 44.000 0.00 0.00 37.74 4.09
327 328 4.744631 GCAGCAGTATCTAGAAAAGAGAGC 59.255 45.833 0.00 0.00 37.74 4.09
328 329 6.147864 AGCAGCAGTATCTAGAAAAGAGAG 57.852 41.667 0.00 0.00 37.74 3.20
329 330 6.831353 AGTAGCAGCAGTATCTAGAAAAGAGA 59.169 38.462 0.00 0.00 37.74 3.10
330 331 7.038154 AGTAGCAGCAGTATCTAGAAAAGAG 57.962 40.000 0.00 0.00 37.74 2.85
331 332 6.039941 GGAGTAGCAGCAGTATCTAGAAAAGA 59.960 42.308 0.00 0.00 39.02 2.52
332 333 6.040391 AGGAGTAGCAGCAGTATCTAGAAAAG 59.960 42.308 0.00 0.00 0.00 2.27
333 334 5.894393 AGGAGTAGCAGCAGTATCTAGAAAA 59.106 40.000 0.00 0.00 0.00 2.29
334 335 5.450453 AGGAGTAGCAGCAGTATCTAGAAA 58.550 41.667 0.00 0.00 0.00 2.52
335 336 5.055265 AGGAGTAGCAGCAGTATCTAGAA 57.945 43.478 0.00 0.00 0.00 2.10
336 337 4.349636 AGAGGAGTAGCAGCAGTATCTAGA 59.650 45.833 0.00 0.00 0.00 2.43
337 338 4.651778 AGAGGAGTAGCAGCAGTATCTAG 58.348 47.826 0.00 0.00 0.00 2.43
338 339 4.349636 AGAGAGGAGTAGCAGCAGTATCTA 59.650 45.833 0.00 0.00 0.00 1.98
339 340 3.138283 AGAGAGGAGTAGCAGCAGTATCT 59.862 47.826 0.00 0.00 0.00 1.98
340 341 3.486383 AGAGAGGAGTAGCAGCAGTATC 58.514 50.000 0.00 0.00 0.00 2.24
341 342 3.593442 AGAGAGGAGTAGCAGCAGTAT 57.407 47.619 0.00 0.00 0.00 2.12
342 343 4.715534 ATAGAGAGGAGTAGCAGCAGTA 57.284 45.455 0.00 0.00 0.00 2.74
343 344 3.593442 ATAGAGAGGAGTAGCAGCAGT 57.407 47.619 0.00 0.00 0.00 4.40
344 345 5.500234 AGATATAGAGAGGAGTAGCAGCAG 58.500 45.833 0.00 0.00 0.00 4.24
345 346 5.512942 AGATATAGAGAGGAGTAGCAGCA 57.487 43.478 0.00 0.00 0.00 4.41
346 347 5.943416 TGAAGATATAGAGAGGAGTAGCAGC 59.057 44.000 0.00 0.00 0.00 5.25
347 348 7.168219 ACTGAAGATATAGAGAGGAGTAGCAG 58.832 42.308 0.00 0.00 0.00 4.24
348 349 7.085476 ACTGAAGATATAGAGAGGAGTAGCA 57.915 40.000 0.00 0.00 0.00 3.49
349 350 8.537016 TCTACTGAAGATATAGAGAGGAGTAGC 58.463 40.741 0.00 0.00 33.45 3.58
352 353 9.338968 AGATCTACTGAAGATATAGAGAGGAGT 57.661 37.037 0.00 0.00 45.35 3.85
380 381 9.622004 CGTAGAGAAAGTACAAAGAGAATTACA 57.378 33.333 0.00 0.00 0.00 2.41
381 382 9.837525 TCGTAGAGAAAGTACAAAGAGAATTAC 57.162 33.333 0.00 0.00 0.00 1.89
401 402 3.623060 GCCAAATTCATTCAGCTCGTAGA 59.377 43.478 0.00 0.00 0.00 2.59
402 403 3.374988 TGCCAAATTCATTCAGCTCGTAG 59.625 43.478 0.00 0.00 0.00 3.51
403 404 3.126858 GTGCCAAATTCATTCAGCTCGTA 59.873 43.478 0.00 0.00 0.00 3.43
404 405 2.095059 GTGCCAAATTCATTCAGCTCGT 60.095 45.455 0.00 0.00 0.00 4.18
405 406 2.163010 AGTGCCAAATTCATTCAGCTCG 59.837 45.455 0.00 0.00 0.00 5.03
406 407 3.863142 AGTGCCAAATTCATTCAGCTC 57.137 42.857 0.00 0.00 0.00 4.09
407 408 3.056322 GGAAGTGCCAAATTCATTCAGCT 60.056 43.478 0.00 0.00 36.34 4.24
408 409 3.256558 GGAAGTGCCAAATTCATTCAGC 58.743 45.455 0.00 0.00 36.34 4.26
409 410 4.524316 TGGAAGTGCCAAATTCATTCAG 57.476 40.909 0.00 0.00 45.87 3.02
422 423 2.036346 ACAAGAAAAGGCATGGAAGTGC 59.964 45.455 0.00 0.00 44.31 4.40
423 424 4.326504 AACAAGAAAAGGCATGGAAGTG 57.673 40.909 0.00 0.00 0.00 3.16
424 425 6.478512 TTTAACAAGAAAAGGCATGGAAGT 57.521 33.333 0.00 0.00 0.00 3.01
425 426 7.784633 TTTTTAACAAGAAAAGGCATGGAAG 57.215 32.000 0.00 0.00 30.30 3.46
470 471 9.220635 GCCTGTTCACAAATTTTAAAAATGTTC 57.779 29.630 15.98 11.61 0.00 3.18
471 472 7.907563 CGCCTGTTCACAAATTTTAAAAATGTT 59.092 29.630 15.98 5.04 0.00 2.71
472 473 7.405769 CGCCTGTTCACAAATTTTAAAAATGT 58.594 30.769 13.87 13.87 0.00 2.71
473 474 6.850317 CCGCCTGTTCACAAATTTTAAAAATG 59.150 34.615 4.44 9.68 0.00 2.32
474 475 6.512578 GCCGCCTGTTCACAAATTTTAAAAAT 60.513 34.615 4.44 0.00 0.00 1.82
475 476 5.220681 GCCGCCTGTTCACAAATTTTAAAAA 60.221 36.000 4.44 0.00 0.00 1.94
476 477 4.271291 GCCGCCTGTTCACAAATTTTAAAA 59.729 37.500 2.51 2.51 0.00 1.52
477 478 3.804873 GCCGCCTGTTCACAAATTTTAAA 59.195 39.130 0.00 0.00 0.00 1.52
478 479 3.181475 TGCCGCCTGTTCACAAATTTTAA 60.181 39.130 0.00 0.00 0.00 1.52
479 480 2.362397 TGCCGCCTGTTCACAAATTTTA 59.638 40.909 0.00 0.00 0.00 1.52
480 481 1.137872 TGCCGCCTGTTCACAAATTTT 59.862 42.857 0.00 0.00 0.00 1.82
481 482 0.749649 TGCCGCCTGTTCACAAATTT 59.250 45.000 0.00 0.00 0.00 1.82
482 483 0.968405 ATGCCGCCTGTTCACAAATT 59.032 45.000 0.00 0.00 0.00 1.82
483 484 0.527565 GATGCCGCCTGTTCACAAAT 59.472 50.000 0.00 0.00 0.00 2.32
484 485 1.523154 GGATGCCGCCTGTTCACAAA 61.523 55.000 0.00 0.00 0.00 2.83
485 486 1.971167 GGATGCCGCCTGTTCACAA 60.971 57.895 0.00 0.00 0.00 3.33
486 487 2.359850 GGATGCCGCCTGTTCACA 60.360 61.111 0.00 0.00 0.00 3.58
487 488 3.134127 GGGATGCCGCCTGTTCAC 61.134 66.667 0.00 0.00 0.00 3.18
488 489 4.776322 CGGGATGCCGCCTGTTCA 62.776 66.667 14.38 0.00 0.00 3.18
498 499 3.520862 CATGTGTGGCCGGGATGC 61.521 66.667 2.18 0.00 0.00 3.91
499 500 2.829914 CCATGTGTGGCCGGGATG 60.830 66.667 2.18 0.00 39.01 3.51
500 501 4.127744 CCCATGTGTGGCCGGGAT 62.128 66.667 2.18 0.00 44.62 3.85
517 518 4.168291 CTCCTCTTCTGGGCCGGC 62.168 72.222 21.18 21.18 0.00 6.13
518 519 4.168291 GCTCCTCTTCTGGGCCGG 62.168 72.222 5.83 5.83 0.00 6.13
519 520 4.521062 CGCTCCTCTTCTGGGCCG 62.521 72.222 0.00 0.00 0.00 6.13
520 521 4.168291 CCGCTCCTCTTCTGGGCC 62.168 72.222 0.00 0.00 0.00 5.80
521 522 4.168291 CCCGCTCCTCTTCTGGGC 62.168 72.222 0.00 0.00 32.09 5.36
522 523 3.474570 CCCCGCTCCTCTTCTGGG 61.475 72.222 0.00 0.00 39.69 4.45
523 524 3.474570 CCCCCGCTCCTCTTCTGG 61.475 72.222 0.00 0.00 0.00 3.86
570 571 1.845809 GAATATTGGGAGCGGCGCAG 61.846 60.000 35.02 6.41 40.81 5.18
571 572 1.891919 GAATATTGGGAGCGGCGCA 60.892 57.895 35.02 13.72 37.71 6.09
572 573 1.891919 TGAATATTGGGAGCGGCGC 60.892 57.895 26.86 26.86 0.00 6.53
573 574 1.831389 CGTGAATATTGGGAGCGGCG 61.831 60.000 0.51 0.51 0.00 6.46
574 575 0.814010 ACGTGAATATTGGGAGCGGC 60.814 55.000 0.00 0.00 0.00 6.53
575 576 2.519377 TACGTGAATATTGGGAGCGG 57.481 50.000 0.00 0.00 0.00 5.52
576 577 3.807622 ACAATACGTGAATATTGGGAGCG 59.192 43.478 12.18 0.00 43.84 5.03
577 578 5.065988 ACAACAATACGTGAATATTGGGAGC 59.934 40.000 12.18 0.00 43.84 4.70
578 579 6.315144 TCACAACAATACGTGAATATTGGGAG 59.685 38.462 12.18 5.28 43.84 4.30
579 580 6.092944 GTCACAACAATACGTGAATATTGGGA 59.907 38.462 12.18 7.68 43.84 4.37
580 581 6.093495 AGTCACAACAATACGTGAATATTGGG 59.907 38.462 12.18 5.74 43.84 4.12
581 582 7.072177 AGTCACAACAATACGTGAATATTGG 57.928 36.000 12.18 0.32 43.84 3.16
582 583 7.180079 GGAGTCACAACAATACGTGAATATTG 58.820 38.462 0.00 2.38 43.40 1.90
583 584 6.035650 CGGAGTCACAACAATACGTGAATATT 59.964 38.462 0.00 0.00 43.40 1.28
584 585 5.518847 CGGAGTCACAACAATACGTGAATAT 59.481 40.000 0.00 0.00 43.40 1.28
617 618 0.240945 CTCGAGCACCGCCAATTTTT 59.759 50.000 0.00 0.00 38.37 1.94
758 760 3.011635 TTCCTCGCTGCTGCCTCTC 62.012 63.158 10.24 0.00 35.36 3.20
839 876 2.126618 CGTCCGCGAGCACTACAA 60.127 61.111 8.23 0.00 41.33 2.41
1022 1059 4.430765 CCGGGTCGTTGACGGGAG 62.431 72.222 3.48 0.00 43.69 4.30
1057 1094 3.139077 CGTCAATTATACCAAGGAGGCC 58.861 50.000 0.00 0.00 43.14 5.19
1289 1335 0.310854 CAGCGACAAAAGACCCAACC 59.689 55.000 0.00 0.00 0.00 3.77
2017 2099 4.472108 TCGGGGGTTGTAATAGACAGATTT 59.528 41.667 0.00 0.00 39.88 2.17
2182 2264 4.026475 GCGTTTGAGCTCATGTGTAGATAC 60.026 45.833 19.04 4.23 0.00 2.24
2357 2439 8.447053 TGTTTTCAAAACTAGCATTTTTGGAAC 58.553 29.630 14.10 16.28 39.88 3.62
2416 2500 1.376609 AATGACATTCGCGGAAGGCC 61.377 55.000 6.13 0.00 38.94 5.19
2538 2623 0.649475 CGAGCTCAAATGCTTCCTCG 59.351 55.000 15.40 0.00 44.17 4.63
2650 2735 3.628017 AGCAAAGTTAATTCACACACGC 58.372 40.909 0.00 0.00 0.00 5.34
2791 2876 2.254546 TGTTCTTTCTCGGTGTGCAT 57.745 45.000 0.00 0.00 0.00 3.96
2805 2890 7.893302 TGATGAAACCCATAACCTAAATGTTCT 59.107 33.333 0.00 0.00 35.17 3.01
2823 2908 9.282247 GATTGATTACTTCACACATGATGAAAC 57.718 33.333 14.98 7.73 35.70 2.78
2840 2925 9.807649 AATGCTCACTATTTTTGGATTGATTAC 57.192 29.630 0.00 0.00 0.00 1.89
2947 3032 4.888917 TGACGGATTGATTACTTCACACA 58.111 39.130 0.00 0.00 32.84 3.72
3044 3129 1.730064 GCCTTCTTTAACGTGCGATGA 59.270 47.619 0.00 0.00 0.00 2.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.