Multiple sequence alignment - TraesCS1D01G413100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G413100 chr1D 100.000 2267 0 0 1 2267 473965061 473967327 0.000000e+00 4187.0
1 TraesCS1D01G413100 chr1D 81.400 1000 93 47 1328 2250 473992713 473993696 0.000000e+00 730.0
2 TraesCS1D01G413100 chr1D 83.816 760 77 34 820 1542 473987175 473987925 0.000000e+00 680.0
3 TraesCS1D01G413100 chr1D 84.500 600 52 14 1702 2265 473987959 473988553 2.540000e-154 555.0
4 TraesCS1D01G413100 chr1D 83.897 621 56 16 681 1284 473879518 473880111 9.150000e-154 553.0
5 TraesCS1D01G413100 chr1D 81.339 493 55 17 1792 2262 473998120 473998597 1.280000e-97 366.0
6 TraesCS1D01G413100 chr1D 84.304 395 38 10 1559 1950 473997746 473998119 4.600000e-97 364.0
7 TraesCS1D01G413100 chr1A 94.231 1716 79 14 563 2267 568383051 568384757 0.000000e+00 2603.0
8 TraesCS1D01G413100 chr1A 90.547 677 47 6 661 1330 568376809 568377475 0.000000e+00 880.0
9 TraesCS1D01G413100 chr1A 81.740 931 87 37 1327 2218 568377539 568378425 0.000000e+00 701.0
10 TraesCS1D01G413100 chr1A 87.719 627 42 14 1663 2262 568394614 568395232 0.000000e+00 699.0
11 TraesCS1D01G413100 chr1A 83.171 719 72 19 1572 2262 568399333 568400030 1.490000e-171 612.0
12 TraesCS1D01G413100 chr1A 85.664 572 58 13 756 1308 568327762 568328328 4.200000e-162 580.0
13 TraesCS1D01G413100 chr1A 88.525 427 28 13 1390 1814 568328597 568329004 4.350000e-137 497.0
14 TraesCS1D01G413100 chr1A 90.305 361 35 0 906 1266 568388898 568389258 7.330000e-130 473.0
15 TraesCS1D01G413100 chr1A 86.126 382 33 12 1622 1999 568389628 568389993 5.870000e-106 394.0
16 TraesCS1D01G413100 chr1A 88.554 332 16 3 1 332 568382354 568382663 1.270000e-102 383.0
17 TraesCS1D01G413100 chr1A 89.535 258 18 6 2015 2265 568390050 568390305 3.630000e-83 318.0
18 TraesCS1D01G413100 chr1A 89.655 174 12 3 1336 1505 568266470 568266641 1.360000e-52 217.0
19 TraesCS1D01G413100 chr1A 97.143 35 1 0 789 823 568121952 568121986 2.430000e-05 60.2
20 TraesCS1D01G413100 chr7B 91.932 533 23 9 1292 1822 152914011 152913497 0.000000e+00 728.0
21 TraesCS1D01G413100 chr7B 93.309 269 17 1 1290 1558 65395624 65395891 1.630000e-106 396.0
22 TraesCS1D01G413100 chr1B 80.796 1005 97 44 1328 2262 659322061 659323039 0.000000e+00 699.0
23 TraesCS1D01G413100 chr1B 82.466 730 82 20 1559 2262 659327039 659327748 4.170000e-167 597.0
24 TraesCS1D01G413100 chr1B 87.199 539 50 9 763 1284 659316616 659317152 1.500000e-166 595.0
25 TraesCS1D01G413100 chr1B 88.453 459 31 10 842 1284 659002558 659003010 3.310000e-148 534.0
26 TraesCS1D01G413100 chr1B 83.646 587 66 17 1694 2262 658969819 658970393 1.990000e-145 525.0
27 TraesCS1D01G413100 chr1B 83.646 587 66 17 1694 2262 659003402 659003976 1.990000e-145 525.0
28 TraesCS1D01G413100 chr1B 86.837 471 51 7 822 1284 659294545 659295012 1.200000e-142 516.0
29 TraesCS1D01G413100 chr1B 87.696 382 29 11 1622 1999 659317827 659318194 1.610000e-116 429.0
30 TraesCS1D01G413100 chr1B 89.615 260 20 5 278 531 659301736 659301994 7.810000e-85 324.0
31 TraesCS1D01G413100 chr1B 89.683 252 20 3 2020 2265 659318254 659318505 1.310000e-82 316.0
32 TraesCS1D01G413100 chr1B 85.811 148 13 2 1391 1530 659074054 659074201 1.400000e-32 150.0
33 TraesCS1D01G413100 chr1B 85.235 149 14 2 1391 1531 659295172 659295320 1.810000e-31 147.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G413100 chr1D 473965061 473967327 2266 False 4187.00 4187 100.000000 1 2267 1 chr1D.!!$F2 2266
1 TraesCS1D01G413100 chr1D 473992713 473993696 983 False 730.00 730 81.400000 1328 2250 1 chr1D.!!$F3 922
2 TraesCS1D01G413100 chr1D 473987175 473988553 1378 False 617.50 680 84.158000 820 2265 2 chr1D.!!$F4 1445
3 TraesCS1D01G413100 chr1D 473879518 473880111 593 False 553.00 553 83.897000 681 1284 1 chr1D.!!$F1 603
4 TraesCS1D01G413100 chr1D 473997746 473998597 851 False 365.00 366 82.821500 1559 2262 2 chr1D.!!$F5 703
5 TraesCS1D01G413100 chr1A 568376809 568384757 7948 False 1141.75 2603 88.768000 1 2267 4 chr1A.!!$F6 2266
6 TraesCS1D01G413100 chr1A 568394614 568395232 618 False 699.00 699 87.719000 1663 2262 1 chr1A.!!$F3 599
7 TraesCS1D01G413100 chr1A 568399333 568400030 697 False 612.00 612 83.171000 1572 2262 1 chr1A.!!$F4 690
8 TraesCS1D01G413100 chr1A 568327762 568329004 1242 False 538.50 580 87.094500 756 1814 2 chr1A.!!$F5 1058
9 TraesCS1D01G413100 chr1A 568388898 568390305 1407 False 395.00 473 88.655333 906 2265 3 chr1A.!!$F7 1359
10 TraesCS1D01G413100 chr7B 152913497 152914011 514 True 728.00 728 91.932000 1292 1822 1 chr7B.!!$R1 530
11 TraesCS1D01G413100 chr1B 659327039 659327748 709 False 597.00 597 82.466000 1559 2262 1 chr1B.!!$F4 703
12 TraesCS1D01G413100 chr1B 659002558 659003976 1418 False 529.50 534 86.049500 842 2262 2 chr1B.!!$F5 1420
13 TraesCS1D01G413100 chr1B 658969819 658970393 574 False 525.00 525 83.646000 1694 2262 1 chr1B.!!$F1 568
14 TraesCS1D01G413100 chr1B 659316616 659323039 6423 False 509.75 699 86.343500 763 2265 4 chr1B.!!$F7 1502
15 TraesCS1D01G413100 chr1B 659294545 659295320 775 False 331.50 516 86.036000 822 1531 2 chr1B.!!$F6 709

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
472 473 0.036022 CCAGATAGCAAGCTAGGGCC 59.964 60.0 7.91 0.0 39.73 5.8 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1605 8658 0.828022 TAGGCGAATGGGTGTGTAGG 59.172 55.0 0.0 0.0 0.0 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 2.128226 AGGGAGCCTGGGACCAAT 59.872 61.111 0.00 0.00 29.57 3.16
23 24 2.276740 GGGAGCCTGGGACCAATG 59.723 66.667 0.00 0.00 0.00 2.82
24 25 2.276740 GGAGCCTGGGACCAATGG 59.723 66.667 0.00 0.00 0.00 3.16
25 26 2.440980 GAGCCTGGGACCAATGGC 60.441 66.667 12.38 12.38 45.21 4.40
26 27 4.066139 AGCCTGGGACCAATGGCC 62.066 66.667 15.66 0.00 45.94 5.36
27 28 4.066139 GCCTGGGACCAATGGCCT 62.066 66.667 3.32 0.00 39.49 5.19
28 29 2.043652 CCTGGGACCAATGGCCTG 60.044 66.667 3.32 0.00 0.00 4.85
29 30 2.615465 CCTGGGACCAATGGCCTGA 61.615 63.158 3.32 0.00 0.00 3.86
30 31 1.077212 CTGGGACCAATGGCCTGAG 60.077 63.158 3.32 0.00 0.00 3.35
31 32 1.541118 TGGGACCAATGGCCTGAGA 60.541 57.895 3.32 0.00 0.00 3.27
32 33 1.225704 GGGACCAATGGCCTGAGAG 59.774 63.158 3.32 0.00 0.00 3.20
33 34 1.225704 GGACCAATGGCCTGAGAGG 59.774 63.158 3.32 1.15 38.80 3.69
34 35 1.225704 GACCAATGGCCTGAGAGGG 59.774 63.158 3.32 0.00 35.37 4.30
35 36 1.542375 ACCAATGGCCTGAGAGGGT 60.542 57.895 3.32 0.00 35.37 4.34
36 37 1.077212 CCAATGGCCTGAGAGGGTG 60.077 63.158 3.32 0.00 35.37 4.61
37 38 1.751927 CAATGGCCTGAGAGGGTGC 60.752 63.158 3.32 0.00 35.37 5.01
38 39 2.233566 AATGGCCTGAGAGGGTGCA 61.234 57.895 3.32 0.00 35.37 4.57
39 40 1.578215 AATGGCCTGAGAGGGTGCAT 61.578 55.000 3.32 0.00 35.37 3.96
40 41 2.124403 GGCCTGAGAGGGTGCATG 60.124 66.667 0.00 0.00 35.37 4.06
41 42 2.827642 GCCTGAGAGGGTGCATGC 60.828 66.667 11.82 11.82 35.37 4.06
42 43 2.672908 CCTGAGAGGGTGCATGCA 59.327 61.111 18.46 18.46 0.00 3.96
43 44 1.748122 CCTGAGAGGGTGCATGCAC 60.748 63.158 37.29 37.29 45.49 4.57
44 45 1.298993 CTGAGAGGGTGCATGCACT 59.701 57.895 40.86 27.90 45.52 4.40
64 65 4.329831 GCACCGGCCATCCTTTTA 57.670 55.556 0.00 0.00 0.00 1.52
65 66 1.807226 GCACCGGCCATCCTTTTAC 59.193 57.895 0.00 0.00 0.00 2.01
66 67 0.963355 GCACCGGCCATCCTTTTACA 60.963 55.000 0.00 0.00 0.00 2.41
67 68 1.540267 CACCGGCCATCCTTTTACAA 58.460 50.000 0.00 0.00 0.00 2.41
68 69 1.472480 CACCGGCCATCCTTTTACAAG 59.528 52.381 0.00 0.00 0.00 3.16
69 70 1.074889 ACCGGCCATCCTTTTACAAGT 59.925 47.619 0.00 0.00 0.00 3.16
70 71 2.167662 CCGGCCATCCTTTTACAAGTT 58.832 47.619 2.24 0.00 0.00 2.66
71 72 2.560981 CCGGCCATCCTTTTACAAGTTT 59.439 45.455 2.24 0.00 0.00 2.66
72 73 3.759618 CCGGCCATCCTTTTACAAGTTTA 59.240 43.478 2.24 0.00 0.00 2.01
73 74 4.218852 CCGGCCATCCTTTTACAAGTTTAA 59.781 41.667 2.24 0.00 0.00 1.52
74 75 5.105513 CCGGCCATCCTTTTACAAGTTTAAT 60.106 40.000 2.24 0.00 0.00 1.40
75 76 6.394809 CGGCCATCCTTTTACAAGTTTAATT 58.605 36.000 2.24 0.00 0.00 1.40
76 77 6.871492 CGGCCATCCTTTTACAAGTTTAATTT 59.129 34.615 2.24 0.00 0.00 1.82
77 78 7.148656 CGGCCATCCTTTTACAAGTTTAATTTG 60.149 37.037 2.24 0.00 0.00 2.32
78 79 7.659799 GGCCATCCTTTTACAAGTTTAATTTGT 59.340 33.333 10.48 10.48 41.36 2.83
79 80 9.699703 GCCATCCTTTTACAAGTTTAATTTGTA 57.300 29.630 8.62 8.62 39.36 2.41
98 99 6.715344 TTGTAAGGATTAGTAACTGTTGCG 57.285 37.500 2.69 0.00 0.00 4.85
99 100 5.786311 TGTAAGGATTAGTAACTGTTGCGT 58.214 37.500 2.69 0.00 0.00 5.24
100 101 6.923012 TGTAAGGATTAGTAACTGTTGCGTA 58.077 36.000 2.69 0.00 0.00 4.42
101 102 7.031372 TGTAAGGATTAGTAACTGTTGCGTAG 58.969 38.462 2.69 0.00 0.00 3.51
102 103 5.656213 AGGATTAGTAACTGTTGCGTAGT 57.344 39.130 2.69 0.00 0.00 2.73
103 104 5.408356 AGGATTAGTAACTGTTGCGTAGTG 58.592 41.667 2.69 0.00 0.00 2.74
104 105 5.184479 AGGATTAGTAACTGTTGCGTAGTGA 59.816 40.000 2.69 0.00 0.00 3.41
105 106 6.040878 GGATTAGTAACTGTTGCGTAGTGAT 58.959 40.000 2.69 0.00 0.00 3.06
106 107 6.019801 GGATTAGTAACTGTTGCGTAGTGATG 60.020 42.308 2.69 0.00 0.00 3.07
107 108 4.514781 AGTAACTGTTGCGTAGTGATGA 57.485 40.909 2.69 0.00 0.00 2.92
108 109 4.878439 AGTAACTGTTGCGTAGTGATGAA 58.122 39.130 2.69 0.00 0.00 2.57
109 110 4.684703 AGTAACTGTTGCGTAGTGATGAAC 59.315 41.667 2.69 0.00 0.00 3.18
110 111 3.106242 ACTGTTGCGTAGTGATGAACA 57.894 42.857 0.00 0.00 0.00 3.18
111 112 3.059884 ACTGTTGCGTAGTGATGAACAG 58.940 45.455 0.00 0.00 45.86 3.16
112 113 3.059884 CTGTTGCGTAGTGATGAACAGT 58.940 45.455 0.00 0.00 39.01 3.55
113 114 3.462982 TGTTGCGTAGTGATGAACAGTT 58.537 40.909 0.00 0.00 33.78 3.16
114 115 3.247411 TGTTGCGTAGTGATGAACAGTTG 59.753 43.478 0.00 0.00 33.78 3.16
115 116 3.106242 TGCGTAGTGATGAACAGTTGT 57.894 42.857 0.00 0.00 33.78 3.32
116 117 3.057019 TGCGTAGTGATGAACAGTTGTC 58.943 45.455 0.00 0.00 33.78 3.18
117 118 2.412089 GCGTAGTGATGAACAGTTGTCC 59.588 50.000 0.00 0.00 33.78 4.02
118 119 3.649073 CGTAGTGATGAACAGTTGTCCA 58.351 45.455 0.00 0.00 33.78 4.02
119 120 4.055360 CGTAGTGATGAACAGTTGTCCAA 58.945 43.478 0.00 0.00 33.78 3.53
120 121 4.690748 CGTAGTGATGAACAGTTGTCCAAT 59.309 41.667 0.00 0.00 33.78 3.16
121 122 5.389830 CGTAGTGATGAACAGTTGTCCAATG 60.390 44.000 0.00 0.00 33.78 2.82
122 123 3.254166 AGTGATGAACAGTTGTCCAATGC 59.746 43.478 0.00 0.00 0.00 3.56
123 124 3.004629 GTGATGAACAGTTGTCCAATGCA 59.995 43.478 0.00 0.00 0.00 3.96
124 125 3.827876 TGATGAACAGTTGTCCAATGCAT 59.172 39.130 0.00 0.00 0.00 3.96
125 126 3.646611 TGAACAGTTGTCCAATGCATG 57.353 42.857 0.00 0.00 0.00 4.06
126 127 2.288334 TGAACAGTTGTCCAATGCATGC 60.288 45.455 11.82 11.82 0.00 4.06
127 128 1.330234 ACAGTTGTCCAATGCATGCA 58.670 45.000 25.04 25.04 0.00 3.96
128 129 1.687660 ACAGTTGTCCAATGCATGCAA 59.312 42.857 26.68 4.80 0.00 4.08
129 130 2.288579 ACAGTTGTCCAATGCATGCAAG 60.289 45.455 26.68 19.65 0.00 4.01
130 131 1.965643 AGTTGTCCAATGCATGCAAGT 59.034 42.857 26.68 13.24 0.00 3.16
131 132 2.366266 AGTTGTCCAATGCATGCAAGTT 59.634 40.909 26.68 13.01 0.00 2.66
132 133 3.573538 AGTTGTCCAATGCATGCAAGTTA 59.426 39.130 26.68 8.30 0.00 2.24
133 134 3.574284 TGTCCAATGCATGCAAGTTAC 57.426 42.857 26.68 19.85 0.00 2.50
134 135 3.156293 TGTCCAATGCATGCAAGTTACT 58.844 40.909 26.68 3.45 0.00 2.24
135 136 4.331108 TGTCCAATGCATGCAAGTTACTA 58.669 39.130 26.68 6.09 0.00 1.82
136 137 4.395854 TGTCCAATGCATGCAAGTTACTAG 59.604 41.667 26.68 7.87 0.00 2.57
137 138 3.378112 TCCAATGCATGCAAGTTACTAGC 59.622 43.478 26.68 0.00 0.00 3.42
138 139 3.379372 CCAATGCATGCAAGTTACTAGCT 59.621 43.478 26.68 0.00 0.00 3.32
139 140 4.576053 CCAATGCATGCAAGTTACTAGCTA 59.424 41.667 26.68 0.00 0.00 3.32
140 141 5.277683 CCAATGCATGCAAGTTACTAGCTAG 60.278 44.000 26.68 19.44 0.00 3.42
141 142 3.797039 TGCATGCAAGTTACTAGCTAGG 58.203 45.455 24.35 6.87 0.00 3.02
142 143 3.450817 TGCATGCAAGTTACTAGCTAGGA 59.549 43.478 24.35 14.30 0.00 2.94
143 144 3.804873 GCATGCAAGTTACTAGCTAGGAC 59.195 47.826 24.35 20.31 0.00 3.85
144 145 4.680708 GCATGCAAGTTACTAGCTAGGACA 60.681 45.833 24.35 10.45 0.00 4.02
145 146 4.451629 TGCAAGTTACTAGCTAGGACAC 57.548 45.455 24.35 16.35 0.00 3.67
146 147 3.830178 TGCAAGTTACTAGCTAGGACACA 59.170 43.478 24.35 16.72 0.00 3.72
147 148 4.466370 TGCAAGTTACTAGCTAGGACACAT 59.534 41.667 24.35 8.18 0.00 3.21
148 149 5.046591 TGCAAGTTACTAGCTAGGACACATT 60.047 40.000 24.35 10.20 0.00 2.71
149 150 5.292101 GCAAGTTACTAGCTAGGACACATTG 59.708 44.000 24.35 19.61 0.00 2.82
150 151 5.012328 AGTTACTAGCTAGGACACATTGC 57.988 43.478 24.35 4.64 0.00 3.56
151 152 4.466370 AGTTACTAGCTAGGACACATTGCA 59.534 41.667 24.35 0.00 0.00 4.08
152 153 3.533606 ACTAGCTAGGACACATTGCAG 57.466 47.619 24.35 0.00 0.00 4.41
153 154 3.099905 ACTAGCTAGGACACATTGCAGA 58.900 45.455 24.35 0.00 0.00 4.26
154 155 2.687700 AGCTAGGACACATTGCAGAG 57.312 50.000 0.00 0.00 0.00 3.35
155 156 2.182827 AGCTAGGACACATTGCAGAGA 58.817 47.619 0.00 0.00 0.00 3.10
156 157 2.770802 AGCTAGGACACATTGCAGAGAT 59.229 45.455 0.00 0.00 0.00 2.75
157 158 2.871022 GCTAGGACACATTGCAGAGATG 59.129 50.000 0.00 0.00 0.00 2.90
158 159 3.431346 GCTAGGACACATTGCAGAGATGA 60.431 47.826 3.89 0.00 0.00 2.92
159 160 2.983229 AGGACACATTGCAGAGATGAC 58.017 47.619 3.89 0.00 0.00 3.06
160 161 2.303890 AGGACACATTGCAGAGATGACA 59.696 45.455 3.89 0.00 0.00 3.58
161 162 2.417933 GGACACATTGCAGAGATGACAC 59.582 50.000 3.89 0.00 0.00 3.67
162 163 2.417933 GACACATTGCAGAGATGACACC 59.582 50.000 3.89 0.00 0.00 4.16
163 164 2.224597 ACACATTGCAGAGATGACACCA 60.225 45.455 3.89 0.00 0.00 4.17
164 165 2.161012 CACATTGCAGAGATGACACCAC 59.839 50.000 3.89 0.00 0.00 4.16
165 166 1.741706 CATTGCAGAGATGACACCACC 59.258 52.381 0.00 0.00 0.00 4.61
166 167 0.764271 TTGCAGAGATGACACCACCA 59.236 50.000 0.00 0.00 0.00 4.17
167 168 0.986527 TGCAGAGATGACACCACCAT 59.013 50.000 0.00 0.00 0.00 3.55
168 169 1.352017 TGCAGAGATGACACCACCATT 59.648 47.619 0.00 0.00 0.00 3.16
169 170 1.741706 GCAGAGATGACACCACCATTG 59.258 52.381 0.00 0.00 0.00 2.82
170 171 1.741706 CAGAGATGACACCACCATTGC 59.258 52.381 0.00 0.00 0.00 3.56
171 172 1.098050 GAGATGACACCACCATTGCC 58.902 55.000 0.00 0.00 0.00 4.52
172 173 0.405198 AGATGACACCACCATTGCCA 59.595 50.000 0.00 0.00 0.00 4.92
173 174 1.006281 AGATGACACCACCATTGCCAT 59.994 47.619 0.00 0.00 0.00 4.40
174 175 1.826720 GATGACACCACCATTGCCATT 59.173 47.619 0.00 0.00 0.00 3.16
175 176 1.714541 TGACACCACCATTGCCATTT 58.285 45.000 0.00 0.00 0.00 2.32
176 177 1.343789 TGACACCACCATTGCCATTTG 59.656 47.619 0.00 0.00 0.00 2.32
177 178 1.344114 GACACCACCATTGCCATTTGT 59.656 47.619 0.00 0.00 0.00 2.83
178 179 2.560542 GACACCACCATTGCCATTTGTA 59.439 45.455 0.00 0.00 0.00 2.41
179 180 2.968574 ACACCACCATTGCCATTTGTAA 59.031 40.909 0.00 0.00 0.00 2.41
180 181 3.006752 ACACCACCATTGCCATTTGTAAG 59.993 43.478 0.00 0.00 0.00 2.34
181 182 3.006752 CACCACCATTGCCATTTGTAAGT 59.993 43.478 0.00 0.00 0.00 2.24
182 183 3.006752 ACCACCATTGCCATTTGTAAGTG 59.993 43.478 0.00 0.00 0.00 3.16
183 184 3.587923 CACCATTGCCATTTGTAAGTGG 58.412 45.455 2.11 2.11 38.55 4.00
189 190 2.298411 CCATTTGTAAGTGGCCATGC 57.702 50.000 9.72 0.00 0.00 4.06
190 191 1.549620 CCATTTGTAAGTGGCCATGCA 59.450 47.619 9.72 0.00 0.00 3.96
191 192 2.168936 CCATTTGTAAGTGGCCATGCAT 59.831 45.455 9.72 0.00 0.00 3.96
192 193 3.191669 CATTTGTAAGTGGCCATGCATG 58.808 45.455 20.19 20.19 0.00 4.06
193 194 0.531657 TTGTAAGTGGCCATGCATGC 59.468 50.000 21.69 11.82 0.00 4.06
194 195 0.611340 TGTAAGTGGCCATGCATGCA 60.611 50.000 25.04 25.04 0.00 3.96
195 196 0.748450 GTAAGTGGCCATGCATGCAT 59.252 50.000 27.46 27.46 37.08 3.96
209 210 3.136123 GCATGGGCACGCTGACAT 61.136 61.111 0.00 0.00 40.72 3.06
210 211 3.104766 CATGGGCACGCTGACATC 58.895 61.111 0.00 0.00 0.00 3.06
211 212 2.512286 ATGGGCACGCTGACATCG 60.512 61.111 0.00 0.00 0.00 3.84
212 213 4.758251 TGGGCACGCTGACATCGG 62.758 66.667 3.49 0.00 0.00 4.18
214 215 4.760047 GGCACGCTGACATCGGGT 62.760 66.667 2.55 0.00 32.06 5.28
215 216 3.490759 GCACGCTGACATCGGGTG 61.491 66.667 2.55 5.30 44.99 4.61
216 217 3.490759 CACGCTGACATCGGGTGC 61.491 66.667 3.49 0.00 38.26 5.01
217 218 4.760047 ACGCTGACATCGGGTGCC 62.760 66.667 3.49 0.00 0.00 5.01
219 220 4.408821 GCTGACATCGGGTGCCCA 62.409 66.667 8.14 0.00 35.37 5.36
220 221 2.124983 CTGACATCGGGTGCCCAG 60.125 66.667 8.14 0.73 35.37 4.45
221 222 4.408821 TGACATCGGGTGCCCAGC 62.409 66.667 8.14 0.00 35.37 4.85
238 239 4.748144 CCCAGCCCAGCCCAAGTC 62.748 72.222 0.00 0.00 0.00 3.01
239 240 3.970410 CCAGCCCAGCCCAAGTCA 61.970 66.667 0.00 0.00 0.00 3.41
240 241 2.674380 CAGCCCAGCCCAAGTCAC 60.674 66.667 0.00 0.00 0.00 3.67
241 242 3.971702 AGCCCAGCCCAAGTCACC 61.972 66.667 0.00 0.00 0.00 4.02
242 243 3.971702 GCCCAGCCCAAGTCACCT 61.972 66.667 0.00 0.00 0.00 4.00
243 244 2.352805 CCCAGCCCAAGTCACCTC 59.647 66.667 0.00 0.00 0.00 3.85
244 245 2.352805 CCAGCCCAAGTCACCTCC 59.647 66.667 0.00 0.00 0.00 4.30
245 246 2.528818 CCAGCCCAAGTCACCTCCA 61.529 63.158 0.00 0.00 0.00 3.86
246 247 1.687612 CAGCCCAAGTCACCTCCAT 59.312 57.895 0.00 0.00 0.00 3.41
247 248 0.393537 CAGCCCAAGTCACCTCCATC 60.394 60.000 0.00 0.00 0.00 3.51
248 249 0.548682 AGCCCAAGTCACCTCCATCT 60.549 55.000 0.00 0.00 0.00 2.90
249 250 1.204146 GCCCAAGTCACCTCCATCTA 58.796 55.000 0.00 0.00 0.00 1.98
250 251 1.134371 GCCCAAGTCACCTCCATCTAC 60.134 57.143 0.00 0.00 0.00 2.59
251 252 1.486726 CCCAAGTCACCTCCATCTACC 59.513 57.143 0.00 0.00 0.00 3.18
252 253 2.472029 CCAAGTCACCTCCATCTACCT 58.528 52.381 0.00 0.00 0.00 3.08
253 254 2.169352 CCAAGTCACCTCCATCTACCTG 59.831 54.545 0.00 0.00 0.00 4.00
254 255 3.099905 CAAGTCACCTCCATCTACCTGA 58.900 50.000 0.00 0.00 0.00 3.86
255 256 3.025322 AGTCACCTCCATCTACCTGAG 57.975 52.381 0.00 0.00 0.00 3.35
256 257 2.583101 AGTCACCTCCATCTACCTGAGA 59.417 50.000 0.00 0.00 39.01 3.27
257 258 3.011821 AGTCACCTCCATCTACCTGAGAA 59.988 47.826 0.00 0.00 37.85 2.87
258 259 3.964031 GTCACCTCCATCTACCTGAGAAT 59.036 47.826 0.00 0.00 37.85 2.40
259 260 5.103473 AGTCACCTCCATCTACCTGAGAATA 60.103 44.000 0.00 0.00 37.85 1.75
260 261 5.777732 GTCACCTCCATCTACCTGAGAATAT 59.222 44.000 0.00 0.00 37.85 1.28
261 262 6.013379 TCACCTCCATCTACCTGAGAATATC 58.987 44.000 0.00 0.00 37.85 1.63
262 263 6.015918 CACCTCCATCTACCTGAGAATATCT 58.984 44.000 0.00 0.00 37.85 1.98
263 264 6.152661 CACCTCCATCTACCTGAGAATATCTC 59.847 46.154 0.39 0.39 43.65 2.75
264 265 5.356751 CCTCCATCTACCTGAGAATATCTCG 59.643 48.000 3.17 0.00 46.25 4.04
265 266 5.882040 TCCATCTACCTGAGAATATCTCGT 58.118 41.667 3.17 0.00 46.25 4.18
266 267 5.707764 TCCATCTACCTGAGAATATCTCGTG 59.292 44.000 3.17 0.00 46.25 4.35
267 268 5.105957 CCATCTACCTGAGAATATCTCGTGG 60.106 48.000 13.91 13.91 46.25 4.94
268 269 4.399219 TCTACCTGAGAATATCTCGTGGG 58.601 47.826 17.51 13.96 46.25 4.61
269 270 3.314307 ACCTGAGAATATCTCGTGGGA 57.686 47.619 17.51 0.00 46.25 4.37
270 271 3.643237 ACCTGAGAATATCTCGTGGGAA 58.357 45.455 17.51 0.00 46.25 3.97
271 272 3.385111 ACCTGAGAATATCTCGTGGGAAC 59.615 47.826 17.51 0.00 46.25 3.62
273 274 3.014604 GAGAATATCTCGTGGGAACCG 57.985 52.381 0.00 0.00 42.86 4.44
274 275 2.288273 GAGAATATCTCGTGGGAACCGG 60.288 54.545 0.00 0.00 42.86 5.28
275 276 4.807783 GAGAATATCTCGTGGGAACCGGT 61.808 52.174 0.00 0.00 42.86 5.28
276 277 6.806209 GAGAATATCTCGTGGGAACCGGTG 62.806 54.167 8.52 0.00 42.86 4.94
283 284 4.583086 GGGAACCGGTGAAAACCA 57.417 55.556 8.52 0.00 40.86 3.67
284 285 2.035421 GGGAACCGGTGAAAACCAC 58.965 57.895 8.52 0.00 41.94 4.16
285 286 0.752376 GGGAACCGGTGAAAACCACA 60.752 55.000 8.52 0.00 43.71 4.17
286 287 2.094080 GGGAACCGGTGAAAACCACAT 61.094 52.381 8.52 0.00 43.71 3.21
287 288 4.224678 GGGAACCGGTGAAAACCACATG 62.225 54.545 8.52 0.00 43.71 3.21
299 300 8.419076 GTGAAAACCACATGAAAACTATGTTT 57.581 30.769 0.00 0.00 45.03 2.83
300 301 8.539674 GTGAAAACCACATGAAAACTATGTTTC 58.460 33.333 0.00 0.00 45.03 2.78
301 302 8.474025 TGAAAACCACATGAAAACTATGTTTCT 58.526 29.630 0.00 0.00 36.67 2.52
302 303 8.647143 AAAACCACATGAAAACTATGTTTCTG 57.353 30.769 0.00 0.00 36.67 3.02
303 304 6.331369 ACCACATGAAAACTATGTTTCTGG 57.669 37.500 0.00 0.00 36.67 3.86
304 305 6.068010 ACCACATGAAAACTATGTTTCTGGA 58.932 36.000 0.00 0.00 36.67 3.86
305 306 6.207417 ACCACATGAAAACTATGTTTCTGGAG 59.793 38.462 0.00 0.00 36.67 3.86
306 307 6.207417 CCACATGAAAACTATGTTTCTGGAGT 59.793 38.462 0.00 0.00 36.67 3.85
307 308 7.255590 CCACATGAAAACTATGTTTCTGGAGTT 60.256 37.037 0.00 0.00 36.67 3.01
308 309 7.805071 CACATGAAAACTATGTTTCTGGAGTTC 59.195 37.037 0.00 0.00 36.67 3.01
309 310 7.721399 ACATGAAAACTATGTTTCTGGAGTTCT 59.279 33.333 0.00 0.00 38.17 3.01
310 311 7.496529 TGAAAACTATGTTTCTGGAGTTCTG 57.503 36.000 0.00 0.00 38.17 3.02
311 312 5.948992 AAACTATGTTTCTGGAGTTCTGC 57.051 39.130 0.00 0.00 30.98 4.26
312 313 4.623932 ACTATGTTTCTGGAGTTCTGCA 57.376 40.909 0.00 0.00 0.00 4.41
313 314 4.973168 ACTATGTTTCTGGAGTTCTGCAA 58.027 39.130 0.00 0.00 0.00 4.08
314 315 5.376625 ACTATGTTTCTGGAGTTCTGCAAA 58.623 37.500 0.00 0.00 0.00 3.68
315 316 5.827797 ACTATGTTTCTGGAGTTCTGCAAAA 59.172 36.000 0.00 0.00 0.00 2.44
316 317 5.796424 ATGTTTCTGGAGTTCTGCAAAAT 57.204 34.783 0.00 0.00 0.00 1.82
317 318 5.596836 TGTTTCTGGAGTTCTGCAAAATT 57.403 34.783 0.00 0.00 0.00 1.82
318 319 5.591099 TGTTTCTGGAGTTCTGCAAAATTC 58.409 37.500 0.00 0.00 0.00 2.17
319 320 5.360714 TGTTTCTGGAGTTCTGCAAAATTCT 59.639 36.000 0.00 0.00 0.00 2.40
320 321 5.695851 TTCTGGAGTTCTGCAAAATTCTC 57.304 39.130 0.00 0.00 0.00 2.87
321 322 4.717877 TCTGGAGTTCTGCAAAATTCTCA 58.282 39.130 0.00 0.00 0.00 3.27
322 323 5.132502 TCTGGAGTTCTGCAAAATTCTCAA 58.867 37.500 0.00 0.00 0.00 3.02
323 324 5.593909 TCTGGAGTTCTGCAAAATTCTCAAA 59.406 36.000 0.00 0.00 0.00 2.69
324 325 6.096705 TCTGGAGTTCTGCAAAATTCTCAAAA 59.903 34.615 0.00 0.00 0.00 2.44
325 326 6.275335 TGGAGTTCTGCAAAATTCTCAAAAG 58.725 36.000 0.00 0.00 0.00 2.27
326 327 5.693555 GGAGTTCTGCAAAATTCTCAAAAGG 59.306 40.000 0.00 0.00 0.00 3.11
327 328 5.052481 AGTTCTGCAAAATTCTCAAAAGGC 58.948 37.500 0.00 0.00 0.00 4.35
328 329 4.942761 TCTGCAAAATTCTCAAAAGGCT 57.057 36.364 0.00 0.00 0.00 4.58
329 330 6.040842 AGTTCTGCAAAATTCTCAAAAGGCTA 59.959 34.615 0.00 0.00 0.00 3.93
330 331 5.772521 TCTGCAAAATTCTCAAAAGGCTAC 58.227 37.500 0.00 0.00 0.00 3.58
331 332 5.536161 TCTGCAAAATTCTCAAAAGGCTACT 59.464 36.000 0.00 0.00 0.00 2.57
332 333 5.531634 TGCAAAATTCTCAAAAGGCTACTG 58.468 37.500 0.00 0.00 0.00 2.74
333 334 4.925646 GCAAAATTCTCAAAAGGCTACTGG 59.074 41.667 0.00 0.00 0.00 4.00
334 335 5.278957 GCAAAATTCTCAAAAGGCTACTGGA 60.279 40.000 0.00 0.00 0.00 3.86
335 336 6.573094 GCAAAATTCTCAAAAGGCTACTGGAT 60.573 38.462 0.00 0.00 0.00 3.41
336 337 7.362920 GCAAAATTCTCAAAAGGCTACTGGATA 60.363 37.037 0.00 0.00 0.00 2.59
337 338 7.872113 AAATTCTCAAAAGGCTACTGGATAG 57.128 36.000 0.00 0.00 0.00 2.08
338 339 6.567602 ATTCTCAAAAGGCTACTGGATAGT 57.432 37.500 0.00 0.00 40.99 2.12
339 340 6.374417 TTCTCAAAAGGCTACTGGATAGTT 57.626 37.500 0.00 0.00 38.36 2.24
340 341 6.374417 TCTCAAAAGGCTACTGGATAGTTT 57.626 37.500 0.00 0.00 38.36 2.66
341 342 6.779860 TCTCAAAAGGCTACTGGATAGTTTT 58.220 36.000 0.00 0.00 38.36 2.43
342 343 6.879458 TCTCAAAAGGCTACTGGATAGTTTTC 59.121 38.462 0.00 0.00 38.36 2.29
343 344 6.779860 TCAAAAGGCTACTGGATAGTTTTCT 58.220 36.000 0.00 0.00 38.36 2.52
344 345 7.913789 TCAAAAGGCTACTGGATAGTTTTCTA 58.086 34.615 0.00 0.00 38.36 2.10
345 346 8.548877 TCAAAAGGCTACTGGATAGTTTTCTAT 58.451 33.333 0.00 0.00 44.79 1.98
346 347 9.832445 CAAAAGGCTACTGGATAGTTTTCTATA 57.168 33.333 0.00 0.00 42.49 1.31
349 350 8.728596 AGGCTACTGGATAGTTTTCTATATGT 57.271 34.615 0.00 0.00 42.49 2.29
350 351 8.589338 AGGCTACTGGATAGTTTTCTATATGTG 58.411 37.037 0.00 0.00 42.49 3.21
351 352 7.819900 GGCTACTGGATAGTTTTCTATATGTGG 59.180 40.741 0.00 0.00 42.49 4.17
352 353 8.585881 GCTACTGGATAGTTTTCTATATGTGGA 58.414 37.037 0.00 0.00 42.49 4.02
353 354 9.915629 CTACTGGATAGTTTTCTATATGTGGAC 57.084 37.037 0.00 0.00 42.49 4.02
354 355 8.319057 ACTGGATAGTTTTCTATATGTGGACA 57.681 34.615 0.00 0.00 42.49 4.02
355 356 8.938883 ACTGGATAGTTTTCTATATGTGGACAT 58.061 33.333 0.00 0.00 42.49 3.06
356 357 9.212641 CTGGATAGTTTTCTATATGTGGACATG 57.787 37.037 2.38 0.00 42.49 3.21
357 358 8.713971 TGGATAGTTTTCTATATGTGGACATGT 58.286 33.333 0.00 0.00 42.49 3.21
371 372 8.816640 ATGTGGACATGTAAAATTTCAAGTTC 57.183 30.769 0.00 0.00 34.83 3.01
372 373 7.776107 TGTGGACATGTAAAATTTCAAGTTCA 58.224 30.769 0.00 0.00 0.00 3.18
373 374 8.253810 TGTGGACATGTAAAATTTCAAGTTCAA 58.746 29.630 0.00 0.00 0.00 2.69
374 375 9.092876 GTGGACATGTAAAATTTCAAGTTCAAA 57.907 29.630 0.00 0.00 0.00 2.69
375 376 9.092876 TGGACATGTAAAATTTCAAGTTCAAAC 57.907 29.630 0.00 0.00 0.00 2.93
376 377 9.092876 GGACATGTAAAATTTCAAGTTCAAACA 57.907 29.630 0.00 0.00 0.00 2.83
394 395 9.788960 GTTCAAACATAGATTCATTTACTTCCC 57.211 33.333 0.00 0.00 0.00 3.97
395 396 8.208718 TCAAACATAGATTCATTTACTTCCCG 57.791 34.615 0.00 0.00 0.00 5.14
396 397 8.044309 TCAAACATAGATTCATTTACTTCCCGA 58.956 33.333 0.00 0.00 0.00 5.14
397 398 8.673711 CAAACATAGATTCATTTACTTCCCGAA 58.326 33.333 0.00 0.00 0.00 4.30
398 399 8.801882 AACATAGATTCATTTACTTCCCGAAA 57.198 30.769 0.00 0.00 0.00 3.46
399 400 8.801882 ACATAGATTCATTTACTTCCCGAAAA 57.198 30.769 0.00 0.00 0.00 2.29
400 401 9.238368 ACATAGATTCATTTACTTCCCGAAAAA 57.762 29.630 0.00 0.00 0.00 1.94
455 456 7.701539 ACAAATTCAGTAATGAATAGTGCCA 57.298 32.000 17.99 0.00 37.52 4.92
456 457 7.765307 ACAAATTCAGTAATGAATAGTGCCAG 58.235 34.615 17.99 6.68 37.52 4.85
457 458 7.611467 ACAAATTCAGTAATGAATAGTGCCAGA 59.389 33.333 17.99 0.00 37.52 3.86
458 459 8.627403 CAAATTCAGTAATGAATAGTGCCAGAT 58.373 33.333 17.99 0.00 37.52 2.90
459 460 9.851686 AAATTCAGTAATGAATAGTGCCAGATA 57.148 29.630 17.99 0.00 37.52 1.98
460 461 9.499479 AATTCAGTAATGAATAGTGCCAGATAG 57.501 33.333 17.99 0.00 37.52 2.08
461 462 6.459066 TCAGTAATGAATAGTGCCAGATAGC 58.541 40.000 0.00 0.00 35.30 2.97
462 463 6.041979 TCAGTAATGAATAGTGCCAGATAGCA 59.958 38.462 0.00 0.00 41.46 3.49
463 464 6.707608 CAGTAATGAATAGTGCCAGATAGCAA 59.292 38.462 0.00 0.00 46.19 3.91
464 465 6.933521 AGTAATGAATAGTGCCAGATAGCAAG 59.066 38.462 0.00 0.00 46.19 4.01
465 466 3.470709 TGAATAGTGCCAGATAGCAAGC 58.529 45.455 0.00 0.00 46.19 4.01
466 467 3.135348 TGAATAGTGCCAGATAGCAAGCT 59.865 43.478 0.00 0.00 46.19 3.74
467 468 4.344968 TGAATAGTGCCAGATAGCAAGCTA 59.655 41.667 4.00 4.00 46.19 3.32
468 469 2.906691 AGTGCCAGATAGCAAGCTAG 57.093 50.000 7.91 0.00 46.19 3.42
469 470 1.415659 AGTGCCAGATAGCAAGCTAGG 59.584 52.381 7.91 4.92 46.19 3.02
470 471 0.761187 TGCCAGATAGCAAGCTAGGG 59.239 55.000 7.91 9.68 40.56 3.53
471 472 0.605050 GCCAGATAGCAAGCTAGGGC 60.605 60.000 19.49 19.49 37.17 5.19
472 473 0.036022 CCAGATAGCAAGCTAGGGCC 59.964 60.000 7.91 0.00 39.73 5.80
473 474 0.761187 CAGATAGCAAGCTAGGGCCA 59.239 55.000 6.18 0.00 39.73 5.36
474 475 1.055040 AGATAGCAAGCTAGGGCCAG 58.945 55.000 6.18 2.03 39.73 4.85
475 476 1.051812 GATAGCAAGCTAGGGCCAGA 58.948 55.000 6.18 0.00 39.73 3.86
476 477 1.417890 GATAGCAAGCTAGGGCCAGAA 59.582 52.381 6.18 0.00 39.73 3.02
477 478 1.511613 TAGCAAGCTAGGGCCAGAAT 58.488 50.000 6.18 0.00 39.73 2.40
478 479 1.511613 AGCAAGCTAGGGCCAGAATA 58.488 50.000 6.18 0.00 39.73 1.75
479 480 2.061061 AGCAAGCTAGGGCCAGAATAT 58.939 47.619 6.18 0.00 39.73 1.28
480 481 2.157738 GCAAGCTAGGGCCAGAATATG 58.842 52.381 6.18 0.00 39.73 1.78
481 482 2.157738 CAAGCTAGGGCCAGAATATGC 58.842 52.381 6.18 0.00 39.73 3.14
482 483 1.438469 AGCTAGGGCCAGAATATGCA 58.562 50.000 6.18 0.00 39.73 3.96
483 484 1.072965 AGCTAGGGCCAGAATATGCAC 59.927 52.381 6.18 0.00 39.73 4.57
484 485 1.202806 GCTAGGGCCAGAATATGCACA 60.203 52.381 6.18 0.00 31.77 4.57
485 486 2.498167 CTAGGGCCAGAATATGCACAC 58.502 52.381 6.18 0.00 31.77 3.82
486 487 0.625316 AGGGCCAGAATATGCACACA 59.375 50.000 6.18 0.00 31.77 3.72
487 488 1.027357 GGGCCAGAATATGCACACAG 58.973 55.000 4.39 0.00 0.00 3.66
488 489 1.027357 GGCCAGAATATGCACACAGG 58.973 55.000 0.00 0.00 0.00 4.00
489 490 1.408683 GGCCAGAATATGCACACAGGA 60.409 52.381 0.00 0.00 0.00 3.86
490 491 2.368439 GCCAGAATATGCACACAGGAA 58.632 47.619 0.00 0.00 0.00 3.36
491 492 2.754552 GCCAGAATATGCACACAGGAAA 59.245 45.455 0.00 0.00 0.00 3.13
492 493 3.193267 GCCAGAATATGCACACAGGAAAA 59.807 43.478 0.00 0.00 0.00 2.29
493 494 4.321899 GCCAGAATATGCACACAGGAAAAA 60.322 41.667 0.00 0.00 0.00 1.94
530 531 8.980481 AAAGAAGAGTGTATTTCCTTTTGAGA 57.020 30.769 0.00 0.00 0.00 3.27
531 532 9.579932 AAAGAAGAGTGTATTTCCTTTTGAGAT 57.420 29.630 0.00 0.00 0.00 2.75
532 533 8.558973 AGAAGAGTGTATTTCCTTTTGAGATG 57.441 34.615 0.00 0.00 0.00 2.90
533 534 8.378565 AGAAGAGTGTATTTCCTTTTGAGATGA 58.621 33.333 0.00 0.00 0.00 2.92
534 535 8.924511 AAGAGTGTATTTCCTTTTGAGATGAA 57.075 30.769 0.00 0.00 0.00 2.57
535 536 8.558973 AGAGTGTATTTCCTTTTGAGATGAAG 57.441 34.615 0.00 0.00 0.00 3.02
536 537 7.120432 AGAGTGTATTTCCTTTTGAGATGAAGC 59.880 37.037 0.00 0.00 0.00 3.86
537 538 6.151817 AGTGTATTTCCTTTTGAGATGAAGCC 59.848 38.462 0.00 0.00 0.00 4.35
538 539 6.151817 GTGTATTTCCTTTTGAGATGAAGCCT 59.848 38.462 0.00 0.00 0.00 4.58
539 540 7.336931 GTGTATTTCCTTTTGAGATGAAGCCTA 59.663 37.037 0.00 0.00 0.00 3.93
540 541 7.888021 TGTATTTCCTTTTGAGATGAAGCCTAA 59.112 33.333 0.00 0.00 0.00 2.69
541 542 6.575162 TTTCCTTTTGAGATGAAGCCTAAC 57.425 37.500 0.00 0.00 0.00 2.34
542 543 4.589908 TCCTTTTGAGATGAAGCCTAACC 58.410 43.478 0.00 0.00 0.00 2.85
543 544 4.042809 TCCTTTTGAGATGAAGCCTAACCA 59.957 41.667 0.00 0.00 0.00 3.67
544 545 4.397417 CCTTTTGAGATGAAGCCTAACCAG 59.603 45.833 0.00 0.00 0.00 4.00
545 546 4.640771 TTTGAGATGAAGCCTAACCAGT 57.359 40.909 0.00 0.00 0.00 4.00
546 547 5.755409 TTTGAGATGAAGCCTAACCAGTA 57.245 39.130 0.00 0.00 0.00 2.74
547 548 5.755409 TTGAGATGAAGCCTAACCAGTAA 57.245 39.130 0.00 0.00 0.00 2.24
548 549 5.086104 TGAGATGAAGCCTAACCAGTAAC 57.914 43.478 0.00 0.00 0.00 2.50
549 550 4.777896 TGAGATGAAGCCTAACCAGTAACT 59.222 41.667 0.00 0.00 0.00 2.24
550 551 5.248477 TGAGATGAAGCCTAACCAGTAACTT 59.752 40.000 0.00 0.00 0.00 2.66
551 552 6.439375 TGAGATGAAGCCTAACCAGTAACTTA 59.561 38.462 0.00 0.00 0.00 2.24
552 553 6.641474 AGATGAAGCCTAACCAGTAACTTAC 58.359 40.000 0.00 0.00 0.00 2.34
553 554 4.813027 TGAAGCCTAACCAGTAACTTACG 58.187 43.478 0.00 0.00 0.00 3.18
554 555 4.281688 TGAAGCCTAACCAGTAACTTACGT 59.718 41.667 0.00 0.00 0.00 3.57
555 556 4.446994 AGCCTAACCAGTAACTTACGTC 57.553 45.455 0.00 0.00 0.00 4.34
556 557 3.828451 AGCCTAACCAGTAACTTACGTCA 59.172 43.478 0.00 0.00 0.00 4.35
557 558 4.281688 AGCCTAACCAGTAACTTACGTCAA 59.718 41.667 0.00 0.00 0.00 3.18
558 559 4.990426 GCCTAACCAGTAACTTACGTCAAA 59.010 41.667 0.00 0.00 0.00 2.69
559 560 5.107337 GCCTAACCAGTAACTTACGTCAAAC 60.107 44.000 0.00 0.00 0.00 2.93
560 561 5.406477 CCTAACCAGTAACTTACGTCAAACC 59.594 44.000 0.00 0.00 0.00 3.27
561 562 4.405116 ACCAGTAACTTACGTCAAACCA 57.595 40.909 0.00 0.00 0.00 3.67
562 563 4.768583 ACCAGTAACTTACGTCAAACCAA 58.231 39.130 0.00 0.00 0.00 3.67
563 564 5.184711 ACCAGTAACTTACGTCAAACCAAA 58.815 37.500 0.00 0.00 0.00 3.28
564 565 5.065090 ACCAGTAACTTACGTCAAACCAAAC 59.935 40.000 0.00 0.00 0.00 2.93
565 566 5.192496 CAGTAACTTACGTCAAACCAAACG 58.808 41.667 0.00 0.00 44.22 3.60
566 567 5.005586 CAGTAACTTACGTCAAACCAAACGA 59.994 40.000 0.00 0.00 41.29 3.85
567 568 3.931285 ACTTACGTCAAACCAAACGAC 57.069 42.857 0.00 0.00 41.29 4.34
568 569 3.524541 ACTTACGTCAAACCAAACGACT 58.475 40.909 0.00 0.00 41.29 4.18
569 570 4.681744 ACTTACGTCAAACCAAACGACTA 58.318 39.130 0.00 0.00 41.29 2.59
570 571 5.108517 ACTTACGTCAAACCAAACGACTAA 58.891 37.500 0.00 0.00 41.29 2.24
571 572 5.754890 ACTTACGTCAAACCAAACGACTAAT 59.245 36.000 0.00 0.00 41.29 1.73
572 573 6.258507 ACTTACGTCAAACCAAACGACTAATT 59.741 34.615 0.00 0.00 41.29 1.40
573 574 5.086888 ACGTCAAACCAAACGACTAATTC 57.913 39.130 1.52 0.00 41.29 2.17
574 575 4.571580 ACGTCAAACCAAACGACTAATTCA 59.428 37.500 1.52 0.00 41.29 2.57
575 576 5.137403 CGTCAAACCAAACGACTAATTCAG 58.863 41.667 0.00 0.00 41.29 3.02
576 577 5.050634 CGTCAAACCAAACGACTAATTCAGA 60.051 40.000 0.00 0.00 41.29 3.27
577 578 6.347402 CGTCAAACCAAACGACTAATTCAGAT 60.347 38.462 0.00 0.00 41.29 2.90
578 579 7.360361 GTCAAACCAAACGACTAATTCAGATT 58.640 34.615 0.00 0.00 0.00 2.40
579 580 7.534239 GTCAAACCAAACGACTAATTCAGATTC 59.466 37.037 0.00 0.00 0.00 2.52
580 581 7.227711 TCAAACCAAACGACTAATTCAGATTCA 59.772 33.333 0.00 0.00 0.00 2.57
581 582 6.727824 ACCAAACGACTAATTCAGATTCAG 57.272 37.500 0.00 0.00 0.00 3.02
582 583 6.464222 ACCAAACGACTAATTCAGATTCAGA 58.536 36.000 0.00 0.00 0.00 3.27
583 584 7.106239 ACCAAACGACTAATTCAGATTCAGAT 58.894 34.615 0.00 0.00 0.00 2.90
584 585 8.258007 ACCAAACGACTAATTCAGATTCAGATA 58.742 33.333 0.00 0.00 0.00 1.98
585 586 8.543774 CCAAACGACTAATTCAGATTCAGATAC 58.456 37.037 0.00 0.00 0.00 2.24
586 587 7.916128 AACGACTAATTCAGATTCAGATACG 57.084 36.000 0.00 0.00 0.00 3.06
587 588 7.260558 ACGACTAATTCAGATTCAGATACGA 57.739 36.000 0.00 0.00 0.00 3.43
588 589 7.133513 ACGACTAATTCAGATTCAGATACGAC 58.866 38.462 0.00 0.00 0.00 4.34
589 590 6.301137 CGACTAATTCAGATTCAGATACGACG 59.699 42.308 0.00 0.00 0.00 5.12
590 591 6.439599 ACTAATTCAGATTCAGATACGACGG 58.560 40.000 0.00 0.00 0.00 4.79
591 592 5.515797 AATTCAGATTCAGATACGACGGA 57.484 39.130 0.00 0.00 0.00 4.69
592 593 5.713792 ATTCAGATTCAGATACGACGGAT 57.286 39.130 0.00 0.00 0.00 4.18
593 594 5.515797 TTCAGATTCAGATACGACGGATT 57.484 39.130 0.00 0.00 0.00 3.01
594 595 5.109662 TCAGATTCAGATACGACGGATTC 57.890 43.478 0.00 0.00 0.00 2.52
595 596 4.578928 TCAGATTCAGATACGACGGATTCA 59.421 41.667 0.00 0.00 0.00 2.57
596 597 5.067283 TCAGATTCAGATACGACGGATTCAA 59.933 40.000 0.00 0.00 0.00 2.69
597 598 5.400782 CAGATTCAGATACGACGGATTCAAG 59.599 44.000 0.00 0.00 0.00 3.02
598 599 4.976224 TTCAGATACGACGGATTCAAGA 57.024 40.909 0.00 0.00 0.00 3.02
599 600 4.553756 TCAGATACGACGGATTCAAGAG 57.446 45.455 0.00 0.00 0.00 2.85
600 601 3.945921 TCAGATACGACGGATTCAAGAGT 59.054 43.478 0.00 0.00 0.00 3.24
601 602 4.398358 TCAGATACGACGGATTCAAGAGTT 59.602 41.667 0.00 0.00 0.00 3.01
602 603 5.587443 TCAGATACGACGGATTCAAGAGTTA 59.413 40.000 0.00 0.00 0.00 2.24
603 604 6.094464 TCAGATACGACGGATTCAAGAGTTAA 59.906 38.462 0.00 0.00 0.00 2.01
604 605 6.918569 CAGATACGACGGATTCAAGAGTTAAT 59.081 38.462 0.00 0.00 0.00 1.40
605 606 7.435488 CAGATACGACGGATTCAAGAGTTAATT 59.565 37.037 0.00 0.00 0.00 1.40
606 607 7.980099 AGATACGACGGATTCAAGAGTTAATTT 59.020 33.333 0.00 0.00 0.00 1.82
607 608 6.165659 ACGACGGATTCAAGAGTTAATTTG 57.834 37.500 0.00 0.00 0.00 2.32
608 609 5.022021 CGACGGATTCAAGAGTTAATTTGC 58.978 41.667 0.00 0.00 0.00 3.68
609 610 5.390461 CGACGGATTCAAGAGTTAATTTGCA 60.390 40.000 0.00 0.00 0.00 4.08
610 611 6.515272 ACGGATTCAAGAGTTAATTTGCAT 57.485 33.333 0.00 0.00 0.00 3.96
611 612 6.924111 ACGGATTCAAGAGTTAATTTGCATT 58.076 32.000 0.00 0.00 0.00 3.56
612 613 7.378181 ACGGATTCAAGAGTTAATTTGCATTT 58.622 30.769 0.00 0.00 0.00 2.32
613 614 7.872483 ACGGATTCAAGAGTTAATTTGCATTTT 59.128 29.630 0.00 0.00 0.00 1.82
614 615 9.352784 CGGATTCAAGAGTTAATTTGCATTTTA 57.647 29.630 0.00 0.00 0.00 1.52
618 619 9.474920 TTCAAGAGTTAATTTGCATTTTAGGTG 57.525 29.630 0.00 0.00 0.00 4.00
619 620 8.855110 TCAAGAGTTAATTTGCATTTTAGGTGA 58.145 29.630 0.00 0.00 0.00 4.02
620 621 9.643693 CAAGAGTTAATTTGCATTTTAGGTGAT 57.356 29.630 0.00 0.00 0.00 3.06
625 626 9.221775 GTTAATTTGCATTTTAGGTGATACTCG 57.778 33.333 0.00 0.00 0.00 4.18
626 627 7.391148 AATTTGCATTTTAGGTGATACTCGT 57.609 32.000 0.00 0.00 0.00 4.18
627 628 8.500753 AATTTGCATTTTAGGTGATACTCGTA 57.499 30.769 0.00 0.00 0.00 3.43
628 629 8.677148 ATTTGCATTTTAGGTGATACTCGTAT 57.323 30.769 0.00 0.00 0.00 3.06
629 630 9.772973 ATTTGCATTTTAGGTGATACTCGTATA 57.227 29.630 0.00 0.00 0.00 1.47
630 631 9.602568 TTTGCATTTTAGGTGATACTCGTATAA 57.397 29.630 0.00 0.00 0.00 0.98
631 632 9.772973 TTGCATTTTAGGTGATACTCGTATAAT 57.227 29.630 0.00 0.00 0.00 1.28
632 633 9.203421 TGCATTTTAGGTGATACTCGTATAATG 57.797 33.333 0.00 0.00 32.93 1.90
633 634 9.204570 GCATTTTAGGTGATACTCGTATAATGT 57.795 33.333 0.00 0.00 32.67 2.71
654 655 4.811555 TTGAAAACATCTCAGGACAACG 57.188 40.909 0.00 0.00 0.00 4.10
655 656 3.804036 TGAAAACATCTCAGGACAACGT 58.196 40.909 0.00 0.00 0.00 3.99
656 657 3.807622 TGAAAACATCTCAGGACAACGTC 59.192 43.478 0.00 0.00 0.00 4.34
657 658 3.469008 AAACATCTCAGGACAACGTCA 57.531 42.857 0.00 0.00 33.68 4.35
658 659 3.685139 AACATCTCAGGACAACGTCAT 57.315 42.857 0.00 0.00 33.68 3.06
659 660 2.964740 ACATCTCAGGACAACGTCATG 58.035 47.619 2.50 2.50 44.30 3.07
664 665 2.754472 TCAGGACAACGTCATGAGTTG 58.246 47.619 24.36 24.36 46.08 3.16
716 717 5.122396 CCTAATTACTCAAACAGGCTGTCAC 59.878 44.000 22.31 0.00 0.00 3.67
718 719 0.546122 ACTCAAACAGGCTGTCACCA 59.454 50.000 22.31 4.53 0.00 4.17
719 720 1.064758 ACTCAAACAGGCTGTCACCAA 60.065 47.619 22.31 4.41 0.00 3.67
749 750 0.732571 CACAAACACCACACGCTTCT 59.267 50.000 0.00 0.00 0.00 2.85
810 826 2.039624 TCCTCTCCTCAGCCACCC 59.960 66.667 0.00 0.00 0.00 4.61
824 7185 3.054361 CAGCCACCCTTTAACCTACAGAT 60.054 47.826 0.00 0.00 0.00 2.90
828 7189 5.684291 GCCACCCTTTAACCTACAGATAGAC 60.684 48.000 0.00 0.00 0.00 2.59
866 7237 2.716424 TGGCCTATAAATAGCAGCCCTT 59.284 45.455 3.32 0.00 37.08 3.95
919 7297 1.251251 CCTCCCCAAGAGCAAACAAG 58.749 55.000 0.00 0.00 41.74 3.16
971 7354 3.495193 CACACGAAAGCTAGCGTTAGTA 58.505 45.455 23.76 0.00 38.92 1.82
1170 7556 1.203187 ACCAAGTCTGCTGAGGAGGTA 60.203 52.381 0.00 0.00 0.00 3.08
1195 7581 0.461961 CCACTTCCAGATCCTCGTCC 59.538 60.000 0.00 0.00 0.00 4.79
1440 8460 5.744300 GCACCATTAACTCTCTATGAGCCAT 60.744 44.000 0.00 0.00 46.41 4.40
1454 8474 2.237143 TGAGCCATACTGCTTAACTGCT 59.763 45.455 0.00 0.00 42.95 4.24
1605 8658 1.593196 TTTGTGCAGCTCCACACTAC 58.407 50.000 10.78 0.00 44.72 2.73
1802 8880 8.677148 ACAGTGAACAAAGATGTACAAACTAT 57.323 30.769 0.00 0.00 39.40 2.12
1898 9132 6.153510 GGAAGGAAAGGAGCATTGTCTATTTT 59.846 38.462 0.00 0.00 0.00 1.82
1985 9228 5.538118 TCGTCTACATTCATGAACTGTGTT 58.462 37.500 22.83 9.31 0.00 3.32
1986 9229 5.405269 TCGTCTACATTCATGAACTGTGTTG 59.595 40.000 22.83 18.19 0.00 3.33
2055 9347 2.433868 TGTAAGAAGTCGTGCCTGTC 57.566 50.000 0.00 0.00 0.00 3.51
2098 9391 1.322538 GGTTTAGCTGGCCACCATGG 61.323 60.000 11.19 11.19 41.55 3.66
2144 9439 1.800805 AGCACACAGAATCCTTGTCG 58.199 50.000 0.00 0.00 0.00 4.35
2148 9443 1.081892 CACAGAATCCTTGTCGCCAG 58.918 55.000 0.00 0.00 0.00 4.85
2240 9548 3.389329 TCTGAGCCCACCAATATTCTCTC 59.611 47.826 0.00 0.00 0.00 3.20
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 2.128226 ATTGGTCCCAGGCTCCCT 59.872 61.111 0.00 0.00 0.00 4.20
6 7 2.276740 CATTGGTCCCAGGCTCCC 59.723 66.667 0.00 0.00 0.00 4.30
7 8 2.276740 CCATTGGTCCCAGGCTCC 59.723 66.667 0.00 0.00 0.00 4.70
8 9 2.440980 GCCATTGGTCCCAGGCTC 60.441 66.667 4.26 0.00 43.70 4.70
9 10 4.066139 GGCCATTGGTCCCAGGCT 62.066 66.667 14.25 0.00 46.23 4.58
10 11 4.066139 AGGCCATTGGTCCCAGGC 62.066 66.667 5.01 7.83 46.28 4.85
11 12 2.043652 CAGGCCATTGGTCCCAGG 60.044 66.667 5.01 0.00 0.00 4.45
12 13 1.077212 CTCAGGCCATTGGTCCCAG 60.077 63.158 5.01 0.00 0.00 4.45
13 14 1.541118 TCTCAGGCCATTGGTCCCA 60.541 57.895 5.01 0.00 0.00 4.37
14 15 1.225704 CTCTCAGGCCATTGGTCCC 59.774 63.158 5.01 0.00 0.00 4.46
15 16 1.225704 CCTCTCAGGCCATTGGTCC 59.774 63.158 5.01 5.88 0.00 4.46
16 17 1.225704 CCCTCTCAGGCCATTGGTC 59.774 63.158 5.01 0.00 32.73 4.02
17 18 1.542375 ACCCTCTCAGGCCATTGGT 60.542 57.895 5.01 0.00 32.73 3.67
18 19 1.077212 CACCCTCTCAGGCCATTGG 60.077 63.158 5.01 0.00 32.73 3.16
19 20 1.751927 GCACCCTCTCAGGCCATTG 60.752 63.158 5.01 0.00 32.73 2.82
20 21 1.578215 ATGCACCCTCTCAGGCCATT 61.578 55.000 5.01 0.00 32.73 3.16
21 22 2.005266 ATGCACCCTCTCAGGCCAT 61.005 57.895 5.01 0.00 32.73 4.40
22 23 2.611800 ATGCACCCTCTCAGGCCA 60.612 61.111 5.01 0.00 32.73 5.36
23 24 2.124403 CATGCACCCTCTCAGGCC 60.124 66.667 0.00 0.00 32.73 5.19
24 25 2.827642 GCATGCACCCTCTCAGGC 60.828 66.667 14.21 0.00 32.73 4.85
25 26 1.748122 GTGCATGCACCCTCTCAGG 60.748 63.158 35.69 0.00 40.79 3.86
26 27 3.900855 GTGCATGCACCCTCTCAG 58.099 61.111 35.69 0.00 40.79 3.35
47 48 0.963355 TGTAAAAGGATGGCCGGTGC 60.963 55.000 1.90 0.00 39.96 5.01
48 49 1.472480 CTTGTAAAAGGATGGCCGGTG 59.528 52.381 1.90 0.00 39.96 4.94
49 50 1.074889 ACTTGTAAAAGGATGGCCGGT 59.925 47.619 1.90 0.00 39.96 5.28
50 51 1.834188 ACTTGTAAAAGGATGGCCGG 58.166 50.000 0.00 0.00 39.96 6.13
51 52 3.934457 AAACTTGTAAAAGGATGGCCG 57.066 42.857 0.00 0.00 39.96 6.13
52 53 7.659799 ACAAATTAAACTTGTAAAAGGATGGCC 59.340 33.333 0.00 0.00 35.26 5.36
53 54 8.601845 ACAAATTAAACTTGTAAAAGGATGGC 57.398 30.769 0.00 0.00 35.26 4.40
72 73 8.234546 CGCAACAGTTACTAATCCTTACAAATT 58.765 33.333 0.00 0.00 0.00 1.82
73 74 7.389607 ACGCAACAGTTACTAATCCTTACAAAT 59.610 33.333 0.00 0.00 0.00 2.32
74 75 6.707161 ACGCAACAGTTACTAATCCTTACAAA 59.293 34.615 0.00 0.00 0.00 2.83
75 76 6.225318 ACGCAACAGTTACTAATCCTTACAA 58.775 36.000 0.00 0.00 0.00 2.41
76 77 5.786311 ACGCAACAGTTACTAATCCTTACA 58.214 37.500 0.00 0.00 0.00 2.41
77 78 7.008992 CACTACGCAACAGTTACTAATCCTTAC 59.991 40.741 0.00 0.00 0.00 2.34
78 79 7.031372 CACTACGCAACAGTTACTAATCCTTA 58.969 38.462 0.00 0.00 0.00 2.69
79 80 5.867716 CACTACGCAACAGTTACTAATCCTT 59.132 40.000 0.00 0.00 0.00 3.36
80 81 5.184479 TCACTACGCAACAGTTACTAATCCT 59.816 40.000 0.00 0.00 0.00 3.24
81 82 5.404946 TCACTACGCAACAGTTACTAATCC 58.595 41.667 0.00 0.00 0.00 3.01
82 83 6.750501 TCATCACTACGCAACAGTTACTAATC 59.249 38.462 0.00 0.00 0.00 1.75
83 84 6.627243 TCATCACTACGCAACAGTTACTAAT 58.373 36.000 0.00 0.00 0.00 1.73
84 85 6.016213 TCATCACTACGCAACAGTTACTAA 57.984 37.500 0.00 0.00 0.00 2.24
85 86 5.632244 TCATCACTACGCAACAGTTACTA 57.368 39.130 0.00 0.00 0.00 1.82
86 87 4.514781 TCATCACTACGCAACAGTTACT 57.485 40.909 0.00 0.00 0.00 2.24
87 88 4.446385 TGTTCATCACTACGCAACAGTTAC 59.554 41.667 0.00 0.00 0.00 2.50
88 89 4.623002 TGTTCATCACTACGCAACAGTTA 58.377 39.130 0.00 0.00 0.00 2.24
89 90 3.462982 TGTTCATCACTACGCAACAGTT 58.537 40.909 0.00 0.00 0.00 3.16
90 91 3.059884 CTGTTCATCACTACGCAACAGT 58.940 45.455 0.00 0.00 39.32 3.55
91 92 3.059884 ACTGTTCATCACTACGCAACAG 58.940 45.455 8.26 8.26 46.24 3.16
92 93 3.106242 ACTGTTCATCACTACGCAACA 57.894 42.857 0.00 0.00 0.00 3.33
93 94 3.247648 ACAACTGTTCATCACTACGCAAC 59.752 43.478 0.00 0.00 0.00 4.17
94 95 3.462982 ACAACTGTTCATCACTACGCAA 58.537 40.909 0.00 0.00 0.00 4.85
95 96 3.057019 GACAACTGTTCATCACTACGCA 58.943 45.455 0.00 0.00 0.00 5.24
96 97 2.412089 GGACAACTGTTCATCACTACGC 59.588 50.000 0.00 0.00 0.00 4.42
97 98 3.649073 TGGACAACTGTTCATCACTACG 58.351 45.455 0.00 0.00 0.00 3.51
98 99 5.617751 GCATTGGACAACTGTTCATCACTAC 60.618 44.000 0.00 0.00 32.75 2.73
99 100 4.455533 GCATTGGACAACTGTTCATCACTA 59.544 41.667 0.00 0.00 32.75 2.74
100 101 3.254166 GCATTGGACAACTGTTCATCACT 59.746 43.478 0.00 0.00 32.75 3.41
101 102 3.004629 TGCATTGGACAACTGTTCATCAC 59.995 43.478 0.00 0.00 32.75 3.06
102 103 3.220940 TGCATTGGACAACTGTTCATCA 58.779 40.909 0.00 0.00 32.75 3.07
103 104 3.921119 TGCATTGGACAACTGTTCATC 57.079 42.857 0.00 0.00 32.75 2.92
104 105 3.615592 GCATGCATTGGACAACTGTTCAT 60.616 43.478 14.21 0.00 32.75 2.57
105 106 2.288334 GCATGCATTGGACAACTGTTCA 60.288 45.455 14.21 0.00 0.00 3.18
106 107 2.288334 TGCATGCATTGGACAACTGTTC 60.288 45.455 18.46 0.00 0.00 3.18
107 108 1.687660 TGCATGCATTGGACAACTGTT 59.312 42.857 18.46 0.00 0.00 3.16
108 109 1.330234 TGCATGCATTGGACAACTGT 58.670 45.000 18.46 0.00 0.00 3.55
109 110 2.288579 ACTTGCATGCATTGGACAACTG 60.289 45.455 23.37 4.53 0.00 3.16
110 111 1.965643 ACTTGCATGCATTGGACAACT 59.034 42.857 23.37 0.00 0.00 3.16
111 112 2.443887 ACTTGCATGCATTGGACAAC 57.556 45.000 23.37 0.00 0.00 3.32
112 113 3.573538 AGTAACTTGCATGCATTGGACAA 59.426 39.130 23.37 3.14 0.00 3.18
113 114 3.156293 AGTAACTTGCATGCATTGGACA 58.844 40.909 23.37 3.98 0.00 4.02
114 115 3.855689 AGTAACTTGCATGCATTGGAC 57.144 42.857 23.37 16.88 0.00 4.02
115 116 3.378112 GCTAGTAACTTGCATGCATTGGA 59.622 43.478 23.37 5.27 32.87 3.53
116 117 3.379372 AGCTAGTAACTTGCATGCATTGG 59.621 43.478 23.37 16.62 34.89 3.16
117 118 4.627611 AGCTAGTAACTTGCATGCATTG 57.372 40.909 23.37 19.23 34.89 2.82
118 119 4.818546 CCTAGCTAGTAACTTGCATGCATT 59.181 41.667 23.37 16.40 34.89 3.56
119 120 4.101585 TCCTAGCTAGTAACTTGCATGCAT 59.898 41.667 23.37 9.62 34.89 3.96
120 121 3.450817 TCCTAGCTAGTAACTTGCATGCA 59.549 43.478 18.46 18.46 34.89 3.96
121 122 3.804873 GTCCTAGCTAGTAACTTGCATGC 59.195 47.826 19.31 11.82 34.89 4.06
122 123 4.806247 GTGTCCTAGCTAGTAACTTGCATG 59.194 45.833 19.31 0.00 34.89 4.06
123 124 4.466370 TGTGTCCTAGCTAGTAACTTGCAT 59.534 41.667 19.31 0.00 34.89 3.96
124 125 3.830178 TGTGTCCTAGCTAGTAACTTGCA 59.170 43.478 19.31 13.16 34.89 4.08
125 126 4.451629 TGTGTCCTAGCTAGTAACTTGC 57.548 45.455 19.31 11.26 32.79 4.01
126 127 5.292101 GCAATGTGTCCTAGCTAGTAACTTG 59.708 44.000 19.31 15.86 0.00 3.16
127 128 5.046591 TGCAATGTGTCCTAGCTAGTAACTT 60.047 40.000 19.31 9.44 0.00 2.66
128 129 4.466370 TGCAATGTGTCCTAGCTAGTAACT 59.534 41.667 19.31 0.00 0.00 2.24
129 130 4.755411 TGCAATGTGTCCTAGCTAGTAAC 58.245 43.478 19.31 16.22 0.00 2.50
130 131 4.709886 TCTGCAATGTGTCCTAGCTAGTAA 59.290 41.667 19.31 4.55 0.00 2.24
131 132 4.278310 TCTGCAATGTGTCCTAGCTAGTA 58.722 43.478 19.31 0.04 0.00 1.82
132 133 3.099905 TCTGCAATGTGTCCTAGCTAGT 58.900 45.455 19.31 0.00 0.00 2.57
133 134 3.382865 TCTCTGCAATGTGTCCTAGCTAG 59.617 47.826 14.20 14.20 0.00 3.42
134 135 3.365472 TCTCTGCAATGTGTCCTAGCTA 58.635 45.455 0.00 0.00 0.00 3.32
135 136 2.182827 TCTCTGCAATGTGTCCTAGCT 58.817 47.619 0.00 0.00 0.00 3.32
136 137 2.680312 TCTCTGCAATGTGTCCTAGC 57.320 50.000 0.00 0.00 0.00 3.42
137 138 4.118410 GTCATCTCTGCAATGTGTCCTAG 58.882 47.826 0.00 0.00 0.00 3.02
138 139 3.515104 TGTCATCTCTGCAATGTGTCCTA 59.485 43.478 0.00 0.00 0.00 2.94
139 140 2.303890 TGTCATCTCTGCAATGTGTCCT 59.696 45.455 0.00 0.00 0.00 3.85
140 141 2.417933 GTGTCATCTCTGCAATGTGTCC 59.582 50.000 0.00 0.00 0.00 4.02
141 142 2.417933 GGTGTCATCTCTGCAATGTGTC 59.582 50.000 0.00 0.00 0.00 3.67
142 143 2.224597 TGGTGTCATCTCTGCAATGTGT 60.225 45.455 0.00 0.00 0.00 3.72
143 144 2.161012 GTGGTGTCATCTCTGCAATGTG 59.839 50.000 0.00 0.00 0.00 3.21
144 145 2.430465 GTGGTGTCATCTCTGCAATGT 58.570 47.619 0.00 0.00 0.00 2.71
145 146 1.741706 GGTGGTGTCATCTCTGCAATG 59.258 52.381 0.00 0.00 0.00 2.82
146 147 1.352017 TGGTGGTGTCATCTCTGCAAT 59.648 47.619 0.00 0.00 0.00 3.56
147 148 0.764271 TGGTGGTGTCATCTCTGCAA 59.236 50.000 0.00 0.00 0.00 4.08
148 149 0.986527 ATGGTGGTGTCATCTCTGCA 59.013 50.000 0.00 0.00 0.00 4.41
149 150 1.741706 CAATGGTGGTGTCATCTCTGC 59.258 52.381 0.00 0.00 0.00 4.26
150 151 1.741706 GCAATGGTGGTGTCATCTCTG 59.258 52.381 0.00 0.00 0.00 3.35
151 152 1.340405 GGCAATGGTGGTGTCATCTCT 60.340 52.381 0.00 0.00 0.00 3.10
152 153 1.098050 GGCAATGGTGGTGTCATCTC 58.902 55.000 0.00 0.00 0.00 2.75
153 154 0.405198 TGGCAATGGTGGTGTCATCT 59.595 50.000 0.00 0.00 0.00 2.90
154 155 1.477553 ATGGCAATGGTGGTGTCATC 58.522 50.000 0.00 0.00 36.61 2.92
155 156 1.941377 AATGGCAATGGTGGTGTCAT 58.059 45.000 0.00 0.00 43.03 3.06
156 157 1.343789 CAAATGGCAATGGTGGTGTCA 59.656 47.619 0.00 0.00 34.56 3.58
157 158 1.344114 ACAAATGGCAATGGTGGTGTC 59.656 47.619 8.29 0.00 0.00 3.67
158 159 1.422531 ACAAATGGCAATGGTGGTGT 58.577 45.000 8.29 0.00 0.00 4.16
159 160 3.006752 ACTTACAAATGGCAATGGTGGTG 59.993 43.478 8.29 0.00 0.00 4.17
160 161 3.006752 CACTTACAAATGGCAATGGTGGT 59.993 43.478 8.29 0.00 0.00 4.16
161 162 3.587923 CACTTACAAATGGCAATGGTGG 58.412 45.455 8.29 0.00 0.00 4.61
162 163 3.587923 CCACTTACAAATGGCAATGGTG 58.412 45.455 8.29 6.58 0.00 4.17
163 164 3.959535 CCACTTACAAATGGCAATGGT 57.040 42.857 8.29 0.00 0.00 3.55
170 171 1.549620 TGCATGGCCACTTACAAATGG 59.450 47.619 8.16 0.00 39.16 3.16
171 172 3.191669 CATGCATGGCCACTTACAAATG 58.808 45.455 19.40 0.00 0.00 2.32
172 173 2.419021 GCATGCATGGCCACTTACAAAT 60.419 45.455 27.34 0.00 0.00 2.32
173 174 1.067000 GCATGCATGGCCACTTACAAA 60.067 47.619 27.34 0.00 0.00 2.83
174 175 0.531657 GCATGCATGGCCACTTACAA 59.468 50.000 27.34 0.00 0.00 2.41
175 176 0.611340 TGCATGCATGGCCACTTACA 60.611 50.000 27.34 11.60 0.00 2.41
176 177 0.748450 ATGCATGCATGGCCACTTAC 59.252 50.000 31.74 9.08 35.03 2.34
177 178 3.210733 ATGCATGCATGGCCACTTA 57.789 47.368 31.74 0.21 35.03 2.24
178 179 4.043859 ATGCATGCATGGCCACTT 57.956 50.000 31.74 6.34 35.03 3.16
192 193 3.117175 GATGTCAGCGTGCCCATGC 62.117 63.158 4.34 4.34 43.42 4.06
193 194 2.816360 CGATGTCAGCGTGCCCATG 61.816 63.158 1.45 0.00 0.00 3.66
194 195 2.512286 CGATGTCAGCGTGCCCAT 60.512 61.111 1.45 0.00 0.00 4.00
195 196 4.758251 CCGATGTCAGCGTGCCCA 62.758 66.667 9.95 0.00 0.00 5.36
197 198 4.760047 ACCCGATGTCAGCGTGCC 62.760 66.667 9.95 0.00 0.00 5.01
198 199 3.490759 CACCCGATGTCAGCGTGC 61.491 66.667 9.95 0.00 0.00 5.34
199 200 3.490759 GCACCCGATGTCAGCGTG 61.491 66.667 9.95 0.00 0.00 5.34
200 201 4.760047 GGCACCCGATGTCAGCGT 62.760 66.667 9.95 0.00 31.05 5.07
221 222 4.748144 GACTTGGGCTGGGCTGGG 62.748 72.222 0.00 0.00 0.00 4.45
222 223 3.970410 TGACTTGGGCTGGGCTGG 61.970 66.667 0.00 0.00 0.00 4.85
223 224 2.674380 GTGACTTGGGCTGGGCTG 60.674 66.667 0.00 0.00 0.00 4.85
224 225 3.971702 GGTGACTTGGGCTGGGCT 61.972 66.667 0.00 0.00 0.00 5.19
225 226 3.927481 GAGGTGACTTGGGCTGGGC 62.927 68.421 0.00 0.00 44.43 5.36
226 227 2.352805 GAGGTGACTTGGGCTGGG 59.647 66.667 0.00 0.00 44.43 4.45
227 228 1.856539 ATGGAGGTGACTTGGGCTGG 61.857 60.000 0.00 0.00 44.43 4.85
228 229 0.393537 GATGGAGGTGACTTGGGCTG 60.394 60.000 0.00 0.00 44.43 4.85
229 230 0.548682 AGATGGAGGTGACTTGGGCT 60.549 55.000 0.00 0.00 44.43 5.19
230 231 1.134371 GTAGATGGAGGTGACTTGGGC 60.134 57.143 0.00 0.00 44.43 5.36
231 232 1.486726 GGTAGATGGAGGTGACTTGGG 59.513 57.143 0.00 0.00 44.43 4.12
232 233 2.169352 CAGGTAGATGGAGGTGACTTGG 59.831 54.545 0.00 0.00 44.43 3.61
233 234 3.099905 TCAGGTAGATGGAGGTGACTTG 58.900 50.000 0.00 0.00 44.43 3.16
234 235 3.011821 TCTCAGGTAGATGGAGGTGACTT 59.988 47.826 0.00 0.00 44.43 3.01
235 236 3.011821 TTCTCAGGTAGATGGAGGTGACT 59.988 47.826 0.00 0.00 37.49 3.41
236 237 3.019799 TCTCAGGTAGATGGAGGTGAC 57.980 52.381 0.00 0.00 0.00 3.67
237 238 3.757947 TTCTCAGGTAGATGGAGGTGA 57.242 47.619 0.00 0.00 33.05 4.02
238 239 6.015918 AGATATTCTCAGGTAGATGGAGGTG 58.984 44.000 0.00 0.00 33.05 4.00
239 240 6.226272 AGATATTCTCAGGTAGATGGAGGT 57.774 41.667 0.00 0.00 33.05 3.85
240 241 5.356751 CGAGATATTCTCAGGTAGATGGAGG 59.643 48.000 5.46 0.00 43.55 4.30
241 242 5.943416 ACGAGATATTCTCAGGTAGATGGAG 59.057 44.000 5.46 0.00 43.55 3.86
242 243 5.707764 CACGAGATATTCTCAGGTAGATGGA 59.292 44.000 5.46 0.00 43.55 3.41
243 244 5.105957 CCACGAGATATTCTCAGGTAGATGG 60.106 48.000 5.46 0.00 43.55 3.51
244 245 5.105957 CCCACGAGATATTCTCAGGTAGATG 60.106 48.000 5.46 0.00 43.55 2.90
245 246 5.013547 CCCACGAGATATTCTCAGGTAGAT 58.986 45.833 5.46 0.00 43.55 1.98
246 247 4.104261 TCCCACGAGATATTCTCAGGTAGA 59.896 45.833 5.46 0.00 43.55 2.59
247 248 4.399219 TCCCACGAGATATTCTCAGGTAG 58.601 47.826 5.46 0.00 43.55 3.18
248 249 4.448720 TCCCACGAGATATTCTCAGGTA 57.551 45.455 5.46 0.00 43.55 3.08
249 250 3.314307 TCCCACGAGATATTCTCAGGT 57.686 47.619 5.46 0.00 43.55 4.00
250 251 3.243907 GGTTCCCACGAGATATTCTCAGG 60.244 52.174 5.46 5.86 43.55 3.86
251 252 3.551046 CGGTTCCCACGAGATATTCTCAG 60.551 52.174 5.46 1.31 43.55 3.35
252 253 2.361119 CGGTTCCCACGAGATATTCTCA 59.639 50.000 5.46 0.00 43.55 3.27
253 254 2.288273 CCGGTTCCCACGAGATATTCTC 60.288 54.545 0.00 0.00 40.06 2.87
254 255 1.687123 CCGGTTCCCACGAGATATTCT 59.313 52.381 0.00 0.00 0.00 2.40
255 256 1.411612 ACCGGTTCCCACGAGATATTC 59.588 52.381 0.00 0.00 0.00 1.75
256 257 1.138266 CACCGGTTCCCACGAGATATT 59.862 52.381 2.97 0.00 0.00 1.28
257 258 0.750850 CACCGGTTCCCACGAGATAT 59.249 55.000 2.97 0.00 0.00 1.63
258 259 0.323633 TCACCGGTTCCCACGAGATA 60.324 55.000 2.97 0.00 0.00 1.98
259 260 1.189524 TTCACCGGTTCCCACGAGAT 61.190 55.000 2.97 0.00 0.00 2.75
260 261 1.401318 TTTCACCGGTTCCCACGAGA 61.401 55.000 2.97 0.00 0.00 4.04
261 262 0.533308 TTTTCACCGGTTCCCACGAG 60.533 55.000 2.97 0.00 0.00 4.18
262 263 0.814812 GTTTTCACCGGTTCCCACGA 60.815 55.000 2.97 0.00 0.00 4.35
263 264 1.650363 GTTTTCACCGGTTCCCACG 59.350 57.895 2.97 0.00 0.00 4.94
264 265 2.035421 GGTTTTCACCGGTTCCCAC 58.965 57.895 2.97 0.00 31.60 4.61
265 266 4.583086 GGTTTTCACCGGTTCCCA 57.417 55.556 2.97 0.00 31.60 4.37
273 274 6.512297 ACATAGTTTTCATGTGGTTTTCACC 58.488 36.000 0.00 0.00 45.48 4.02
274 275 8.419076 AAACATAGTTTTCATGTGGTTTTCAC 57.581 30.769 0.00 0.00 46.23 3.18
275 276 8.474025 AGAAACATAGTTTTCATGTGGTTTTCA 58.526 29.630 0.00 0.00 37.86 2.69
276 277 8.755018 CAGAAACATAGTTTTCATGTGGTTTTC 58.245 33.333 0.00 0.00 37.86 2.29
277 278 7.710475 CCAGAAACATAGTTTTCATGTGGTTTT 59.290 33.333 0.00 0.00 37.86 2.43
278 279 7.069331 TCCAGAAACATAGTTTTCATGTGGTTT 59.931 33.333 0.00 0.00 37.86 3.27
279 280 6.549364 TCCAGAAACATAGTTTTCATGTGGTT 59.451 34.615 0.00 0.00 37.86 3.67
280 281 6.068010 TCCAGAAACATAGTTTTCATGTGGT 58.932 36.000 0.00 0.00 37.86 4.16
281 282 6.207417 ACTCCAGAAACATAGTTTTCATGTGG 59.793 38.462 0.00 0.00 37.86 4.17
282 283 7.206981 ACTCCAGAAACATAGTTTTCATGTG 57.793 36.000 0.00 0.00 37.86 3.21
283 284 7.721399 AGAACTCCAGAAACATAGTTTTCATGT 59.279 33.333 0.00 0.00 37.86 3.21
284 285 8.019669 CAGAACTCCAGAAACATAGTTTTCATG 58.980 37.037 0.00 0.00 37.86 3.07
285 286 7.308830 GCAGAACTCCAGAAACATAGTTTTCAT 60.309 37.037 0.00 0.00 37.86 2.57
286 287 6.017109 GCAGAACTCCAGAAACATAGTTTTCA 60.017 38.462 0.00 0.00 37.86 2.69
287 288 6.017109 TGCAGAACTCCAGAAACATAGTTTTC 60.017 38.462 0.00 0.00 35.97 2.29
288 289 5.827797 TGCAGAACTCCAGAAACATAGTTTT 59.172 36.000 0.00 0.00 32.51 2.43
289 290 5.376625 TGCAGAACTCCAGAAACATAGTTT 58.623 37.500 0.00 0.00 32.51 2.66
290 291 4.973168 TGCAGAACTCCAGAAACATAGTT 58.027 39.130 0.00 0.00 34.96 2.24
291 292 4.623932 TGCAGAACTCCAGAAACATAGT 57.376 40.909 0.00 0.00 0.00 2.12
292 293 5.947228 TTTGCAGAACTCCAGAAACATAG 57.053 39.130 0.00 0.00 0.00 2.23
293 294 6.899393 ATTTTGCAGAACTCCAGAAACATA 57.101 33.333 0.00 0.00 0.00 2.29
294 295 5.796424 ATTTTGCAGAACTCCAGAAACAT 57.204 34.783 0.00 0.00 0.00 2.71
295 296 5.360714 AGAATTTTGCAGAACTCCAGAAACA 59.639 36.000 0.00 0.00 0.00 2.83
296 297 5.836347 AGAATTTTGCAGAACTCCAGAAAC 58.164 37.500 0.00 0.00 0.00 2.78
297 298 5.593909 TGAGAATTTTGCAGAACTCCAGAAA 59.406 36.000 0.00 0.00 0.00 2.52
298 299 5.132502 TGAGAATTTTGCAGAACTCCAGAA 58.867 37.500 0.00 0.00 0.00 3.02
299 300 4.717877 TGAGAATTTTGCAGAACTCCAGA 58.282 39.130 0.00 0.00 0.00 3.86
300 301 5.443185 TTGAGAATTTTGCAGAACTCCAG 57.557 39.130 0.00 0.00 0.00 3.86
301 302 5.850557 TTTGAGAATTTTGCAGAACTCCA 57.149 34.783 0.00 0.00 0.00 3.86
302 303 5.693555 CCTTTTGAGAATTTTGCAGAACTCC 59.306 40.000 0.00 0.00 0.00 3.85
303 304 5.176406 GCCTTTTGAGAATTTTGCAGAACTC 59.824 40.000 0.00 0.00 0.00 3.01
304 305 5.052481 GCCTTTTGAGAATTTTGCAGAACT 58.948 37.500 0.00 0.00 0.00 3.01
305 306 5.052481 AGCCTTTTGAGAATTTTGCAGAAC 58.948 37.500 0.00 0.00 0.00 3.01
306 307 5.280654 AGCCTTTTGAGAATTTTGCAGAA 57.719 34.783 0.00 0.00 0.00 3.02
307 308 4.942761 AGCCTTTTGAGAATTTTGCAGA 57.057 36.364 0.00 0.00 0.00 4.26
308 309 5.632347 CAGTAGCCTTTTGAGAATTTTGCAG 59.368 40.000 0.00 0.00 0.00 4.41
309 310 5.509501 CCAGTAGCCTTTTGAGAATTTTGCA 60.510 40.000 0.00 0.00 0.00 4.08
310 311 4.925646 CCAGTAGCCTTTTGAGAATTTTGC 59.074 41.667 0.00 0.00 0.00 3.68
311 312 6.331369 TCCAGTAGCCTTTTGAGAATTTTG 57.669 37.500 0.00 0.00 0.00 2.44
312 313 7.890655 ACTATCCAGTAGCCTTTTGAGAATTTT 59.109 33.333 0.00 0.00 33.47 1.82
313 314 7.406104 ACTATCCAGTAGCCTTTTGAGAATTT 58.594 34.615 0.00 0.00 33.47 1.82
314 315 6.963322 ACTATCCAGTAGCCTTTTGAGAATT 58.037 36.000 0.00 0.00 33.47 2.17
315 316 6.567602 ACTATCCAGTAGCCTTTTGAGAAT 57.432 37.500 0.00 0.00 33.47 2.40
316 317 6.374417 AACTATCCAGTAGCCTTTTGAGAA 57.626 37.500 0.00 0.00 33.48 2.87
317 318 6.374417 AAACTATCCAGTAGCCTTTTGAGA 57.626 37.500 0.00 0.00 33.48 3.27
318 319 6.881602 AGAAAACTATCCAGTAGCCTTTTGAG 59.118 38.462 0.00 0.00 33.48 3.02
319 320 6.779860 AGAAAACTATCCAGTAGCCTTTTGA 58.220 36.000 0.00 0.00 33.48 2.69
320 321 8.738645 ATAGAAAACTATCCAGTAGCCTTTTG 57.261 34.615 0.00 0.00 33.48 2.44
323 324 9.160412 ACATATAGAAAACTATCCAGTAGCCTT 57.840 33.333 0.00 0.00 33.48 4.35
324 325 8.589338 CACATATAGAAAACTATCCAGTAGCCT 58.411 37.037 0.00 0.00 33.48 4.58
325 326 7.819900 CCACATATAGAAAACTATCCAGTAGCC 59.180 40.741 0.00 0.00 33.48 3.93
326 327 8.585881 TCCACATATAGAAAACTATCCAGTAGC 58.414 37.037 0.00 0.00 33.48 3.58
327 328 9.915629 GTCCACATATAGAAAACTATCCAGTAG 57.084 37.037 0.00 0.00 33.48 2.57
328 329 9.429109 TGTCCACATATAGAAAACTATCCAGTA 57.571 33.333 0.00 0.00 33.48 2.74
329 330 8.319057 TGTCCACATATAGAAAACTATCCAGT 57.681 34.615 0.00 0.00 36.19 4.00
330 331 9.212641 CATGTCCACATATAGAAAACTATCCAG 57.787 37.037 0.00 0.00 34.26 3.86
331 332 8.713971 ACATGTCCACATATAGAAAACTATCCA 58.286 33.333 0.00 0.00 34.26 3.41
345 346 9.906660 GAACTTGAAATTTTACATGTCCACATA 57.093 29.630 0.00 0.00 34.26 2.29
346 347 8.420222 TGAACTTGAAATTTTACATGTCCACAT 58.580 29.630 0.00 0.00 36.96 3.21
347 348 7.776107 TGAACTTGAAATTTTACATGTCCACA 58.224 30.769 0.00 0.00 0.00 4.17
348 349 8.641499 TTGAACTTGAAATTTTACATGTCCAC 57.359 30.769 0.00 0.00 0.00 4.02
349 350 9.092876 GTTTGAACTTGAAATTTTACATGTCCA 57.907 29.630 0.00 0.00 0.00 4.02
350 351 9.092876 TGTTTGAACTTGAAATTTTACATGTCC 57.907 29.630 0.00 0.00 0.00 4.02
368 369 9.788960 GGGAAGTAAATGAATCTATGTTTGAAC 57.211 33.333 0.00 0.00 0.00 3.18
369 370 8.673711 CGGGAAGTAAATGAATCTATGTTTGAA 58.326 33.333 0.00 0.00 0.00 2.69
370 371 8.044309 TCGGGAAGTAAATGAATCTATGTTTGA 58.956 33.333 0.00 0.00 0.00 2.69
371 372 8.208718 TCGGGAAGTAAATGAATCTATGTTTG 57.791 34.615 0.00 0.00 0.00 2.93
372 373 8.801882 TTCGGGAAGTAAATGAATCTATGTTT 57.198 30.769 0.00 0.00 0.00 2.83
373 374 8.801882 TTTCGGGAAGTAAATGAATCTATGTT 57.198 30.769 0.00 0.00 0.00 2.71
374 375 8.801882 TTTTCGGGAAGTAAATGAATCTATGT 57.198 30.769 0.00 0.00 0.00 2.29
436 437 6.931281 GCTATCTGGCACTATTCATTACTGAA 59.069 38.462 0.00 0.00 45.15 3.02
437 438 6.041979 TGCTATCTGGCACTATTCATTACTGA 59.958 38.462 0.00 0.00 37.29 3.41
438 439 6.226052 TGCTATCTGGCACTATTCATTACTG 58.774 40.000 0.00 0.00 37.29 2.74
439 440 6.425210 TGCTATCTGGCACTATTCATTACT 57.575 37.500 0.00 0.00 37.29 2.24
440 441 6.348050 GCTTGCTATCTGGCACTATTCATTAC 60.348 42.308 0.00 0.00 42.27 1.89
441 442 5.702670 GCTTGCTATCTGGCACTATTCATTA 59.297 40.000 0.00 0.00 42.27 1.90
442 443 4.518211 GCTTGCTATCTGGCACTATTCATT 59.482 41.667 0.00 0.00 42.27 2.57
443 444 4.070716 GCTTGCTATCTGGCACTATTCAT 58.929 43.478 0.00 0.00 42.27 2.57
444 445 3.135348 AGCTTGCTATCTGGCACTATTCA 59.865 43.478 0.00 0.00 42.27 2.57
445 446 3.737850 AGCTTGCTATCTGGCACTATTC 58.262 45.455 0.00 0.00 42.27 1.75
446 447 3.853355 AGCTTGCTATCTGGCACTATT 57.147 42.857 0.00 0.00 42.27 1.73
447 448 3.260380 CCTAGCTTGCTATCTGGCACTAT 59.740 47.826 2.59 0.00 42.27 2.12
448 449 2.630098 CCTAGCTTGCTATCTGGCACTA 59.370 50.000 2.59 0.00 42.27 2.74
449 450 1.415659 CCTAGCTTGCTATCTGGCACT 59.584 52.381 2.59 0.00 42.27 4.40
450 451 1.542108 CCCTAGCTTGCTATCTGGCAC 60.542 57.143 2.59 0.00 42.27 5.01
451 452 0.761187 CCCTAGCTTGCTATCTGGCA 59.239 55.000 2.59 0.00 40.74 4.92
452 453 0.605050 GCCCTAGCTTGCTATCTGGC 60.605 60.000 16.48 16.48 35.50 4.85
453 454 0.036022 GGCCCTAGCTTGCTATCTGG 59.964 60.000 2.59 5.88 39.73 3.86
454 455 0.761187 TGGCCCTAGCTTGCTATCTG 59.239 55.000 0.00 0.00 39.73 2.90
455 456 1.055040 CTGGCCCTAGCTTGCTATCT 58.945 55.000 0.00 0.00 39.73 1.98
456 457 1.051812 TCTGGCCCTAGCTTGCTATC 58.948 55.000 0.00 0.00 39.73 2.08
457 458 1.511613 TTCTGGCCCTAGCTTGCTAT 58.488 50.000 0.00 0.00 39.73 2.97
458 459 1.511613 ATTCTGGCCCTAGCTTGCTA 58.488 50.000 0.00 2.19 39.73 3.49
459 460 1.511613 TATTCTGGCCCTAGCTTGCT 58.488 50.000 0.00 0.00 39.73 3.91
460 461 2.157738 CATATTCTGGCCCTAGCTTGC 58.842 52.381 0.00 0.00 39.73 4.01
461 462 2.157738 GCATATTCTGGCCCTAGCTTG 58.842 52.381 0.00 0.00 39.73 4.01
462 463 1.776667 TGCATATTCTGGCCCTAGCTT 59.223 47.619 0.00 0.00 39.73 3.74
463 464 1.072965 GTGCATATTCTGGCCCTAGCT 59.927 52.381 0.00 0.00 39.73 3.32
464 465 1.202806 TGTGCATATTCTGGCCCTAGC 60.203 52.381 0.00 0.00 38.76 3.42
465 466 2.158769 TGTGTGCATATTCTGGCCCTAG 60.159 50.000 0.00 0.00 0.00 3.02
466 467 1.843206 TGTGTGCATATTCTGGCCCTA 59.157 47.619 0.00 0.00 0.00 3.53
467 468 0.625316 TGTGTGCATATTCTGGCCCT 59.375 50.000 0.00 0.00 0.00 5.19
468 469 1.027357 CTGTGTGCATATTCTGGCCC 58.973 55.000 0.00 0.00 0.00 5.80
469 470 1.027357 CCTGTGTGCATATTCTGGCC 58.973 55.000 0.00 0.00 0.00 5.36
470 471 2.042686 TCCTGTGTGCATATTCTGGC 57.957 50.000 0.00 0.00 0.00 4.85
471 472 5.389859 TTTTTCCTGTGTGCATATTCTGG 57.610 39.130 0.00 0.00 0.00 3.86
504 505 9.408648 TCTCAAAAGGAAATACACTCTTCTTTT 57.591 29.630 0.00 0.00 33.69 2.27
505 506 8.980481 TCTCAAAAGGAAATACACTCTTCTTT 57.020 30.769 0.00 0.00 0.00 2.52
506 507 9.007901 CATCTCAAAAGGAAATACACTCTTCTT 57.992 33.333 0.00 0.00 0.00 2.52
507 508 8.378565 TCATCTCAAAAGGAAATACACTCTTCT 58.621 33.333 0.00 0.00 0.00 2.85
508 509 8.553459 TCATCTCAAAAGGAAATACACTCTTC 57.447 34.615 0.00 0.00 0.00 2.87
509 510 8.924511 TTCATCTCAAAAGGAAATACACTCTT 57.075 30.769 0.00 0.00 0.00 2.85
510 511 7.120432 GCTTCATCTCAAAAGGAAATACACTCT 59.880 37.037 0.00 0.00 0.00 3.24
511 512 7.247019 GCTTCATCTCAAAAGGAAATACACTC 58.753 38.462 0.00 0.00 0.00 3.51
512 513 6.151817 GGCTTCATCTCAAAAGGAAATACACT 59.848 38.462 0.00 0.00 0.00 3.55
513 514 6.151817 AGGCTTCATCTCAAAAGGAAATACAC 59.848 38.462 0.00 0.00 0.00 2.90
514 515 6.248433 AGGCTTCATCTCAAAAGGAAATACA 58.752 36.000 0.00 0.00 0.00 2.29
515 516 6.765915 AGGCTTCATCTCAAAAGGAAATAC 57.234 37.500 0.00 0.00 0.00 1.89
516 517 7.339466 GGTTAGGCTTCATCTCAAAAGGAAATA 59.661 37.037 0.00 0.00 0.00 1.40
517 518 6.153510 GGTTAGGCTTCATCTCAAAAGGAAAT 59.846 38.462 0.00 0.00 0.00 2.17
518 519 5.476945 GGTTAGGCTTCATCTCAAAAGGAAA 59.523 40.000 0.00 0.00 0.00 3.13
519 520 5.010282 GGTTAGGCTTCATCTCAAAAGGAA 58.990 41.667 0.00 0.00 0.00 3.36
520 521 4.042809 TGGTTAGGCTTCATCTCAAAAGGA 59.957 41.667 0.00 0.00 0.00 3.36
521 522 4.335416 TGGTTAGGCTTCATCTCAAAAGG 58.665 43.478 0.00 0.00 0.00 3.11
522 523 5.006386 ACTGGTTAGGCTTCATCTCAAAAG 58.994 41.667 0.00 0.00 0.00 2.27
523 524 4.985538 ACTGGTTAGGCTTCATCTCAAAA 58.014 39.130 0.00 0.00 0.00 2.44
524 525 4.640771 ACTGGTTAGGCTTCATCTCAAA 57.359 40.909 0.00 0.00 0.00 2.69
525 526 5.248477 AGTTACTGGTTAGGCTTCATCTCAA 59.752 40.000 0.00 0.00 0.00 3.02
526 527 4.777896 AGTTACTGGTTAGGCTTCATCTCA 59.222 41.667 0.00 0.00 0.00 3.27
527 528 5.346181 AGTTACTGGTTAGGCTTCATCTC 57.654 43.478 0.00 0.00 0.00 2.75
528 529 5.763876 AAGTTACTGGTTAGGCTTCATCT 57.236 39.130 0.00 0.00 0.00 2.90
529 530 5.519206 CGTAAGTTACTGGTTAGGCTTCATC 59.481 44.000 11.17 0.00 0.00 2.92
530 531 5.416947 CGTAAGTTACTGGTTAGGCTTCAT 58.583 41.667 11.17 0.00 0.00 2.57
531 532 4.813027 CGTAAGTTACTGGTTAGGCTTCA 58.187 43.478 11.17 0.00 0.00 3.02
548 549 5.640218 TTAGTCGTTTGGTTTGACGTAAG 57.360 39.130 0.00 0.00 40.03 2.34
549 550 6.257411 TGAATTAGTCGTTTGGTTTGACGTAA 59.743 34.615 0.00 0.00 40.03 3.18
550 551 5.752472 TGAATTAGTCGTTTGGTTTGACGTA 59.248 36.000 0.00 0.00 40.03 3.57
551 552 4.571580 TGAATTAGTCGTTTGGTTTGACGT 59.428 37.500 0.00 0.00 40.03 4.34
552 553 5.050634 TCTGAATTAGTCGTTTGGTTTGACG 60.051 40.000 0.00 0.00 40.43 4.35
553 554 6.295039 TCTGAATTAGTCGTTTGGTTTGAC 57.705 37.500 0.00 0.00 0.00 3.18
554 555 7.227711 TGAATCTGAATTAGTCGTTTGGTTTGA 59.772 33.333 0.00 0.00 0.00 2.69
555 556 7.359595 TGAATCTGAATTAGTCGTTTGGTTTG 58.640 34.615 0.00 0.00 0.00 2.93
556 557 7.444183 TCTGAATCTGAATTAGTCGTTTGGTTT 59.556 33.333 0.00 0.00 0.00 3.27
557 558 6.934645 TCTGAATCTGAATTAGTCGTTTGGTT 59.065 34.615 0.00 0.00 0.00 3.67
558 559 6.464222 TCTGAATCTGAATTAGTCGTTTGGT 58.536 36.000 0.00 0.00 0.00 3.67
559 560 6.968131 TCTGAATCTGAATTAGTCGTTTGG 57.032 37.500 0.00 0.00 0.00 3.28
560 561 8.262588 CGTATCTGAATCTGAATTAGTCGTTTG 58.737 37.037 0.00 0.00 0.00 2.93
561 562 8.188799 TCGTATCTGAATCTGAATTAGTCGTTT 58.811 33.333 0.00 0.00 0.00 3.60
562 563 7.644551 GTCGTATCTGAATCTGAATTAGTCGTT 59.355 37.037 0.00 0.00 0.00 3.85
563 564 7.133513 GTCGTATCTGAATCTGAATTAGTCGT 58.866 38.462 0.00 0.00 0.00 4.34
564 565 6.301137 CGTCGTATCTGAATCTGAATTAGTCG 59.699 42.308 0.00 0.00 0.00 4.18
565 566 6.579292 CCGTCGTATCTGAATCTGAATTAGTC 59.421 42.308 0.00 0.00 0.00 2.59
566 567 6.262496 TCCGTCGTATCTGAATCTGAATTAGT 59.738 38.462 0.00 0.00 0.00 2.24
567 568 6.669278 TCCGTCGTATCTGAATCTGAATTAG 58.331 40.000 0.00 0.00 0.00 1.73
568 569 6.628919 TCCGTCGTATCTGAATCTGAATTA 57.371 37.500 0.00 0.00 0.00 1.40
569 570 5.515797 TCCGTCGTATCTGAATCTGAATT 57.484 39.130 0.00 0.00 0.00 2.17
570 571 5.713792 ATCCGTCGTATCTGAATCTGAAT 57.286 39.130 0.00 0.00 0.00 2.57
571 572 5.067283 TGAATCCGTCGTATCTGAATCTGAA 59.933 40.000 0.00 0.00 0.00 3.02
572 573 4.578928 TGAATCCGTCGTATCTGAATCTGA 59.421 41.667 0.00 0.00 0.00 3.27
573 574 4.860072 TGAATCCGTCGTATCTGAATCTG 58.140 43.478 0.00 0.00 0.00 2.90
574 575 5.299531 TCTTGAATCCGTCGTATCTGAATCT 59.700 40.000 0.00 0.00 0.00 2.40
575 576 5.520632 TCTTGAATCCGTCGTATCTGAATC 58.479 41.667 0.00 0.00 0.00 2.52
576 577 5.067936 ACTCTTGAATCCGTCGTATCTGAAT 59.932 40.000 0.00 0.00 0.00 2.57
577 578 4.398358 ACTCTTGAATCCGTCGTATCTGAA 59.602 41.667 0.00 0.00 0.00 3.02
578 579 3.945921 ACTCTTGAATCCGTCGTATCTGA 59.054 43.478 0.00 0.00 0.00 3.27
579 580 4.294416 ACTCTTGAATCCGTCGTATCTG 57.706 45.455 0.00 0.00 0.00 2.90
580 581 4.985538 AACTCTTGAATCCGTCGTATCT 57.014 40.909 0.00 0.00 0.00 1.98
581 582 7.695869 AATTAACTCTTGAATCCGTCGTATC 57.304 36.000 0.00 0.00 0.00 2.24
582 583 7.465513 GCAAATTAACTCTTGAATCCGTCGTAT 60.466 37.037 0.00 0.00 0.00 3.06
583 584 6.183360 GCAAATTAACTCTTGAATCCGTCGTA 60.183 38.462 0.00 0.00 0.00 3.43
584 585 5.390567 GCAAATTAACTCTTGAATCCGTCGT 60.391 40.000 0.00 0.00 0.00 4.34
585 586 5.022021 GCAAATTAACTCTTGAATCCGTCG 58.978 41.667 0.00 0.00 0.00 5.12
586 587 5.938322 TGCAAATTAACTCTTGAATCCGTC 58.062 37.500 0.00 0.00 0.00 4.79
587 588 5.957842 TGCAAATTAACTCTTGAATCCGT 57.042 34.783 0.00 0.00 0.00 4.69
588 589 7.816945 AAATGCAAATTAACTCTTGAATCCG 57.183 32.000 0.00 0.00 0.00 4.18
592 593 9.474920 CACCTAAAATGCAAATTAACTCTTGAA 57.525 29.630 0.00 0.00 0.00 2.69
593 594 8.855110 TCACCTAAAATGCAAATTAACTCTTGA 58.145 29.630 0.00 0.00 0.00 3.02
594 595 9.643693 ATCACCTAAAATGCAAATTAACTCTTG 57.356 29.630 0.00 0.00 0.00 3.02
599 600 9.221775 CGAGTATCACCTAAAATGCAAATTAAC 57.778 33.333 0.00 0.00 33.17 2.01
600 601 8.952278 ACGAGTATCACCTAAAATGCAAATTAA 58.048 29.630 0.00 0.00 33.17 1.40
601 602 8.500753 ACGAGTATCACCTAAAATGCAAATTA 57.499 30.769 0.00 0.00 33.17 1.40
602 603 7.391148 ACGAGTATCACCTAAAATGCAAATT 57.609 32.000 0.00 0.00 33.17 1.82
603 604 8.677148 ATACGAGTATCACCTAAAATGCAAAT 57.323 30.769 0.00 0.00 33.17 2.32
604 605 9.602568 TTATACGAGTATCACCTAAAATGCAAA 57.397 29.630 0.00 0.00 33.17 3.68
605 606 9.772973 ATTATACGAGTATCACCTAAAATGCAA 57.227 29.630 0.00 0.00 33.17 4.08
606 607 9.203421 CATTATACGAGTATCACCTAAAATGCA 57.797 33.333 0.00 0.00 33.17 3.96
607 608 9.204570 ACATTATACGAGTATCACCTAAAATGC 57.795 33.333 0.00 0.00 33.17 3.56
614 615 9.095065 GTTTTCAACATTATACGAGTATCACCT 57.905 33.333 0.00 0.00 33.17 4.00
615 616 8.875803 TGTTTTCAACATTATACGAGTATCACC 58.124 33.333 0.00 0.00 36.25 4.02
631 632 4.035091 CGTTGTCCTGAGATGTTTTCAACA 59.965 41.667 0.00 0.00 46.94 3.33
632 633 4.035208 ACGTTGTCCTGAGATGTTTTCAAC 59.965 41.667 0.00 0.00 0.00 3.18
633 634 4.196193 ACGTTGTCCTGAGATGTTTTCAA 58.804 39.130 0.00 0.00 0.00 2.69
634 635 3.804036 ACGTTGTCCTGAGATGTTTTCA 58.196 40.909 0.00 0.00 0.00 2.69
635 636 3.807622 TGACGTTGTCCTGAGATGTTTTC 59.192 43.478 0.00 0.00 0.00 2.29
636 637 3.804036 TGACGTTGTCCTGAGATGTTTT 58.196 40.909 0.00 0.00 0.00 2.43
637 638 3.469008 TGACGTTGTCCTGAGATGTTT 57.531 42.857 0.00 0.00 0.00 2.83
638 639 3.006859 TCATGACGTTGTCCTGAGATGTT 59.993 43.478 0.00 0.00 33.59 2.71
639 640 2.562738 TCATGACGTTGTCCTGAGATGT 59.437 45.455 0.00 0.00 33.59 3.06
640 641 3.236632 TCATGACGTTGTCCTGAGATG 57.763 47.619 0.00 0.00 33.59 2.90
644 645 2.547855 CCAACTCATGACGTTGTCCTGA 60.548 50.000 24.08 5.12 39.98 3.86
645 646 1.800586 CCAACTCATGACGTTGTCCTG 59.199 52.381 24.08 13.01 39.98 3.86
646 647 1.270839 CCCAACTCATGACGTTGTCCT 60.271 52.381 24.08 1.18 39.98 3.85
647 648 1.156736 CCCAACTCATGACGTTGTCC 58.843 55.000 24.08 0.00 39.98 4.02
648 649 1.156736 CCCCAACTCATGACGTTGTC 58.843 55.000 24.08 0.00 39.98 3.18
649 650 0.250727 CCCCCAACTCATGACGTTGT 60.251 55.000 24.08 7.99 39.98 3.32
650 651 1.586154 GCCCCCAACTCATGACGTTG 61.586 60.000 21.47 21.47 40.98 4.10
651 652 1.303317 GCCCCCAACTCATGACGTT 60.303 57.895 0.00 0.00 0.00 3.99
652 653 2.351276 GCCCCCAACTCATGACGT 59.649 61.111 0.00 0.00 0.00 4.34
653 654 2.040544 GTGCCCCCAACTCATGACG 61.041 63.158 0.00 0.00 0.00 4.35
654 655 1.678970 GGTGCCCCCAACTCATGAC 60.679 63.158 0.00 0.00 0.00 3.06
655 656 2.763215 GGTGCCCCCAACTCATGA 59.237 61.111 0.00 0.00 0.00 3.07
656 657 2.751436 CGGTGCCCCCAACTCATG 60.751 66.667 0.00 0.00 0.00 3.07
657 658 4.047125 CCGGTGCCCCCAACTCAT 62.047 66.667 0.00 0.00 0.00 2.90
662 663 4.629958 ATTTGCCGGTGCCCCCAA 62.630 61.111 1.90 0.00 36.33 4.12
719 720 6.183360 CGTGTGGTGTTTGTGATGAAATTTTT 60.183 34.615 0.00 0.00 0.00 1.94
728 729 1.333619 GAAGCGTGTGGTGTTTGTGAT 59.666 47.619 0.00 0.00 0.00 3.06
749 750 2.158608 TCGAGCTAGGGATCAGACATGA 60.159 50.000 0.00 0.00 40.50 3.07
810 826 8.251026 TGTCATGTGTCTATCTGTAGGTTAAAG 58.749 37.037 0.00 0.00 0.00 1.85
824 7185 0.981183 GGGGGTGTGTCATGTGTCTA 59.019 55.000 0.00 0.00 0.00 2.59
828 7189 0.966875 CCATGGGGGTGTGTCATGTG 60.967 60.000 2.85 0.00 37.24 3.21
866 7237 2.037251 GGTTGGTGTCTCTCTTGCTGTA 59.963 50.000 0.00 0.00 0.00 2.74
919 7297 2.034221 GGTGTGGGCTCCTGGAAC 59.966 66.667 0.00 0.00 0.00 3.62
971 7354 5.247110 AGGTGAGATGTGATGTTCTACTTGT 59.753 40.000 0.00 0.00 0.00 3.16
1170 7556 3.665675 GATCTGGAAGTGGCGGCGT 62.666 63.158 9.37 0.00 33.76 5.68
1399 8400 2.705220 CCAGTCGTCATGCATGCG 59.295 61.111 26.88 26.88 0.00 4.73
1440 8460 1.610624 GGTGGCAGCAGTTAAGCAGTA 60.611 52.381 12.58 0.00 36.85 2.74
1605 8658 0.828022 TAGGCGAATGGGTGTGTAGG 59.172 55.000 0.00 0.00 0.00 3.18
1802 8880 9.702253 ACAGTCCATTCTTACTTCTTAGAGATA 57.298 33.333 0.00 0.00 0.00 1.98
1898 9132 8.779303 CATGACCTAACAATACTTTGTACACAA 58.221 33.333 0.00 0.00 45.30 3.33
1985 9228 8.669946 TGACAGTTTACTGATAATGAACAACA 57.330 30.769 16.31 0.00 46.59 3.33
1986 9229 9.546909 CATGACAGTTTACTGATAATGAACAAC 57.453 33.333 16.31 0.00 46.59 3.32
2098 9391 1.141053 ACCTGTGGAGTCCAAACTGAC 59.859 52.381 15.09 0.18 35.28 3.51
2144 9439 3.097614 TCTCTTGTAGGAAGGTACTGGC 58.902 50.000 0.00 0.00 40.86 4.85
2148 9443 5.477637 AGTGACTTCTCTTGTAGGAAGGTAC 59.522 44.000 0.00 0.00 42.05 3.34
2240 9548 5.998454 ACCTCGATTCAATGATGCTTAAG 57.002 39.130 0.00 0.00 0.00 1.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.