Multiple sequence alignment - TraesCS1D01G409900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G409900 chr1D 100.000 2770 0 0 1 2770 471607857 471605088 0.000000e+00 5116.0
1 TraesCS1D01G409900 chr1D 100.000 29 0 0 912 940 471606902 471606874 1.000000e-03 54.7
2 TraesCS1D01G409900 chr1D 100.000 29 0 0 956 984 471606946 471606918 1.000000e-03 54.7
3 TraesCS1D01G409900 chr1B 90.252 913 46 27 337 1231 655779782 655778895 0.000000e+00 1153.0
4 TraesCS1D01G409900 chr1B 93.125 320 11 2 1639 1948 655778561 655778243 2.510000e-125 459.0
5 TraesCS1D01G409900 chr1B 82.520 246 16 14 179 424 655780002 655779784 1.010000e-44 191.0
6 TraesCS1D01G409900 chr1B 94.215 121 7 0 1533 1653 113565123 113565243 4.710000e-43 185.0
7 TraesCS1D01G409900 chr1B 91.597 119 8 2 3 119 476016020 476016138 2.210000e-36 163.0
8 TraesCS1D01G409900 chr1A 90.661 514 32 6 1639 2139 566007056 566006546 0.000000e+00 669.0
9 TraesCS1D01G409900 chr1A 89.858 493 27 13 743 1231 566008056 566007583 1.820000e-171 612.0
10 TraesCS1D01G409900 chr1A 85.983 478 38 8 2322 2770 566006301 566005824 4.150000e-133 484.0
11 TraesCS1D01G409900 chr1A 91.633 251 17 2 1290 1536 566007304 566007054 7.340000e-91 344.0
12 TraesCS1D01G409900 chr1A 98.305 59 1 0 1228 1286 566007434 566007376 1.360000e-18 104.0
13 TraesCS1D01G409900 chr1A 81.188 101 11 7 173 267 591371384 591371482 1.060000e-09 75.0
14 TraesCS1D01G409900 chr5D 85.176 398 43 8 179 574 557781771 557781388 7.190000e-106 394.0
15 TraesCS1D01G409900 chr5D 93.750 112 7 0 1 112 555341061 555341172 4.740000e-38 169.0
16 TraesCS1D01G409900 chr3D 91.200 250 17 3 1290 1536 308266170 308265923 4.420000e-88 335.0
17 TraesCS1D01G409900 chr3D 88.182 220 22 3 1015 1231 308266647 308266429 2.740000e-65 259.0
18 TraesCS1D01G409900 chr3D 88.742 151 8 4 1780 1923 308265495 308265347 2.840000e-40 176.0
19 TraesCS1D01G409900 chr3D 96.552 58 2 0 1229 1286 308266292 308266235 2.270000e-16 97.1
20 TraesCS1D01G409900 chr3B 90.800 250 18 3 1290 1536 413040732 413040979 2.060000e-86 329.0
21 TraesCS1D01G409900 chr3B 87.783 221 22 4 1015 1231 413040254 413040473 1.270000e-63 254.0
22 TraesCS1D01G409900 chr3B 87.755 147 12 4 1780 1923 413041405 413041548 1.710000e-37 167.0
23 TraesCS1D01G409900 chr3B 96.552 58 2 0 1229 1286 413040610 413040667 2.270000e-16 97.1
24 TraesCS1D01G409900 chr3A 90.800 250 16 5 1290 1536 427761310 427761065 7.400000e-86 327.0
25 TraesCS1D01G409900 chr3A 88.182 220 22 3 1015 1231 427761787 427761569 2.740000e-65 259.0
26 TraesCS1D01G409900 chr3A 84.106 151 9 5 1780 1923 427760637 427760495 6.220000e-27 132.0
27 TraesCS1D01G409900 chr3A 94.828 58 3 0 1229 1286 427761432 427761375 1.060000e-14 91.6
28 TraesCS1D01G409900 chr2D 96.610 118 2 2 1530 1646 111321518 111321402 7.830000e-46 195.0
29 TraesCS1D01G409900 chr2D 97.321 112 3 0 1534 1645 529636492 529636381 1.010000e-44 191.0
30 TraesCS1D01G409900 chr2D 96.491 114 4 0 1534 1647 176518118 176518005 3.640000e-44 189.0
31 TraesCS1D01G409900 chr2D 96.522 115 3 1 1530 1643 420568623 420568737 3.640000e-44 189.0
32 TraesCS1D01G409900 chr2D 94.643 112 5 1 2 112 420568739 420568628 3.670000e-39 172.0
33 TraesCS1D01G409900 chr7B 95.763 118 5 0 1524 1641 723903784 723903901 1.010000e-44 191.0
34 TraesCS1D01G409900 chr4D 95.763 118 4 1 1529 1646 16450342 16450226 3.640000e-44 189.0
35 TraesCS1D01G409900 chr5B 94.958 119 5 1 1529 1647 671299379 671299496 4.710000e-43 185.0
36 TraesCS1D01G409900 chr5B 92.373 118 7 1 3 118 474610258 474610375 1.710000e-37 167.0
37 TraesCS1D01G409900 chr5B 92.982 114 6 2 1 112 632580516 632580629 6.140000e-37 165.0
38 TraesCS1D01G409900 chr2B 97.248 109 3 0 1532 1640 779185821 779185929 4.710000e-43 185.0
39 TraesCS1D01G409900 chr6D 94.643 112 6 0 2 113 397359926 397359815 1.020000e-39 174.0
40 TraesCS1D01G409900 chrUn 93.043 115 7 1 6 119 317331263 317331149 1.710000e-37 167.0
41 TraesCS1D01G409900 chrUn 93.750 112 6 1 6 116 349067387 349067498 1.710000e-37 167.0
42 TraesCS1D01G409900 chr6A 92.982 114 8 0 6 119 101998560 101998447 1.710000e-37 167.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G409900 chr1D 471605088 471607857 2769 True 1741.800 5116 100.000000 1 2770 3 chr1D.!!$R1 2769
1 TraesCS1D01G409900 chr1B 655778243 655780002 1759 True 601.000 1153 88.632333 179 1948 3 chr1B.!!$R1 1769
2 TraesCS1D01G409900 chr1A 566005824 566008056 2232 True 442.600 669 91.288000 743 2770 5 chr1A.!!$R1 2027
3 TraesCS1D01G409900 chr3D 308265347 308266647 1300 True 216.775 335 91.169000 1015 1923 4 chr3D.!!$R1 908
4 TraesCS1D01G409900 chr3B 413040254 413041548 1294 False 211.775 329 90.722500 1015 1923 4 chr3B.!!$F1 908
5 TraesCS1D01G409900 chr3A 427760495 427761787 1292 True 202.400 327 89.479000 1015 1923 4 chr3A.!!$R1 908

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
231 232 0.241749 TTAGGCCTGACACACGTACG 59.758 55.0 17.99 15.01 0.0 3.67 F
235 236 0.389426 GCCTGACACACGTACGGATT 60.389 55.0 21.06 0.00 0.0 3.01 F
1543 1885 0.179097 GCTGCTTTCTACTCCCTCCG 60.179 60.0 0.00 0.00 0.0 4.63 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1094 1200 0.031716 AGGATCTAGCACAGGCCTCA 60.032 55.0 0.0 0.0 42.56 3.86 R
1625 1967 0.172803 CAAGGTACTCCCTCCGTTCG 59.827 60.0 0.0 0.0 45.47 3.95 R
2596 3334 0.179234 TCAACCTGCACTTCGTTCCA 59.821 50.0 0.0 0.0 0.00 3.53 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.719739 TGTAGTACTCCCTCTGTTCGG 58.280 52.381 0.00 0.00 0.00 4.30
21 22 2.306805 TGTAGTACTCCCTCTGTTCGGA 59.693 50.000 0.00 0.00 0.00 4.55
22 23 2.599408 AGTACTCCCTCTGTTCGGAA 57.401 50.000 0.00 0.00 0.00 4.30
23 24 3.103080 AGTACTCCCTCTGTTCGGAAT 57.897 47.619 0.00 0.00 0.00 3.01
24 25 3.442076 AGTACTCCCTCTGTTCGGAATT 58.558 45.455 0.00 0.00 0.00 2.17
25 26 4.607239 AGTACTCCCTCTGTTCGGAATTA 58.393 43.478 0.00 0.00 0.00 1.40
26 27 3.889520 ACTCCCTCTGTTCGGAATTAC 57.110 47.619 0.00 0.00 0.00 1.89
27 28 3.442076 ACTCCCTCTGTTCGGAATTACT 58.558 45.455 0.00 0.00 0.00 2.24
28 29 3.447944 ACTCCCTCTGTTCGGAATTACTC 59.552 47.826 0.00 0.00 0.00 2.59
29 30 2.426024 TCCCTCTGTTCGGAATTACTCG 59.574 50.000 0.00 0.00 0.00 4.18
30 31 2.165845 CCCTCTGTTCGGAATTACTCGT 59.834 50.000 0.00 0.00 0.00 4.18
31 32 3.436496 CCTCTGTTCGGAATTACTCGTC 58.564 50.000 0.00 0.00 0.00 4.20
32 33 3.436496 CTCTGTTCGGAATTACTCGTCC 58.564 50.000 0.00 0.00 0.00 4.79
33 34 2.821378 TCTGTTCGGAATTACTCGTCCA 59.179 45.455 0.00 0.00 33.10 4.02
34 35 3.256383 TCTGTTCGGAATTACTCGTCCAA 59.744 43.478 0.00 0.00 33.10 3.53
35 36 3.581755 TGTTCGGAATTACTCGTCCAAG 58.418 45.455 0.00 0.00 33.10 3.61
36 37 3.256383 TGTTCGGAATTACTCGTCCAAGA 59.744 43.478 0.00 0.00 33.10 3.02
37 38 4.240096 GTTCGGAATTACTCGTCCAAGAA 58.760 43.478 0.00 0.00 33.10 2.52
38 39 4.524316 TCGGAATTACTCGTCCAAGAAA 57.476 40.909 0.00 0.00 33.10 2.52
39 40 5.080969 TCGGAATTACTCGTCCAAGAAAT 57.919 39.130 0.00 0.00 33.10 2.17
40 41 4.868171 TCGGAATTACTCGTCCAAGAAATG 59.132 41.667 0.00 0.00 33.10 2.32
41 42 4.868171 CGGAATTACTCGTCCAAGAAATGA 59.132 41.667 0.00 0.00 33.10 2.57
42 43 5.350365 CGGAATTACTCGTCCAAGAAATGAA 59.650 40.000 0.00 0.00 33.10 2.57
43 44 6.543736 GGAATTACTCGTCCAAGAAATGAAC 58.456 40.000 0.00 0.00 33.79 3.18
44 45 5.779806 ATTACTCGTCCAAGAAATGAACG 57.220 39.130 0.00 0.00 34.80 3.95
45 46 3.107642 ACTCGTCCAAGAAATGAACGT 57.892 42.857 0.00 0.00 35.04 3.99
46 47 4.247267 ACTCGTCCAAGAAATGAACGTA 57.753 40.909 0.00 0.00 35.04 3.57
47 48 4.817517 ACTCGTCCAAGAAATGAACGTAT 58.182 39.130 0.00 0.00 35.04 3.06
48 49 4.625742 ACTCGTCCAAGAAATGAACGTATG 59.374 41.667 0.00 0.00 35.04 2.39
49 50 4.562082 TCGTCCAAGAAATGAACGTATGT 58.438 39.130 0.00 0.00 35.04 2.29
50 51 5.712004 TCGTCCAAGAAATGAACGTATGTA 58.288 37.500 0.00 0.00 35.04 2.29
51 52 5.803461 TCGTCCAAGAAATGAACGTATGTAG 59.197 40.000 0.00 0.00 35.04 2.74
52 53 5.803461 CGTCCAAGAAATGAACGTATGTAGA 59.197 40.000 0.00 0.00 0.00 2.59
53 54 6.475727 CGTCCAAGAAATGAACGTATGTAGAT 59.524 38.462 0.00 0.00 0.00 1.98
54 55 7.515215 CGTCCAAGAAATGAACGTATGTAGATG 60.515 40.741 0.00 0.00 0.00 2.90
55 56 7.277981 GTCCAAGAAATGAACGTATGTAGATGT 59.722 37.037 0.00 0.00 0.00 3.06
56 57 8.471609 TCCAAGAAATGAACGTATGTAGATGTA 58.528 33.333 0.00 0.00 0.00 2.29
57 58 9.261180 CCAAGAAATGAACGTATGTAGATGTAT 57.739 33.333 0.00 0.00 0.00 2.29
86 87 8.731275 AATCGTAGATACATCCATTTTTGTGA 57.269 30.769 0.00 0.00 45.12 3.58
87 88 7.534085 TCGTAGATACATCCATTTTTGTGAC 57.466 36.000 0.00 0.00 0.00 3.67
88 89 7.100409 TCGTAGATACATCCATTTTTGTGACA 58.900 34.615 0.00 0.00 0.00 3.58
89 90 7.604545 TCGTAGATACATCCATTTTTGTGACAA 59.395 33.333 0.00 0.00 0.00 3.18
90 91 7.904977 CGTAGATACATCCATTTTTGTGACAAG 59.095 37.037 0.00 0.00 0.00 3.16
91 92 7.765695 AGATACATCCATTTTTGTGACAAGT 57.234 32.000 0.00 0.00 0.00 3.16
92 93 8.862325 AGATACATCCATTTTTGTGACAAGTA 57.138 30.769 0.00 0.00 0.00 2.24
93 94 9.295825 AGATACATCCATTTTTGTGACAAGTAA 57.704 29.630 0.00 0.00 0.00 2.24
96 97 8.816640 ACATCCATTTTTGTGACAAGTAATTC 57.183 30.769 0.00 0.00 0.00 2.17
97 98 7.872483 ACATCCATTTTTGTGACAAGTAATTCC 59.128 33.333 0.00 0.00 0.00 3.01
98 99 6.442952 TCCATTTTTGTGACAAGTAATTCCG 58.557 36.000 0.00 0.00 0.00 4.30
99 100 6.263392 TCCATTTTTGTGACAAGTAATTCCGA 59.737 34.615 0.00 0.00 0.00 4.55
100 101 6.920758 CCATTTTTGTGACAAGTAATTCCGAA 59.079 34.615 0.00 0.00 0.00 4.30
101 102 7.096230 CCATTTTTGTGACAAGTAATTCCGAAC 60.096 37.037 0.00 0.00 0.00 3.95
102 103 6.438259 TTTTGTGACAAGTAATTCCGAACA 57.562 33.333 0.00 0.00 0.00 3.18
103 104 5.666969 TTGTGACAAGTAATTCCGAACAG 57.333 39.130 0.00 0.00 0.00 3.16
104 105 4.951254 TGTGACAAGTAATTCCGAACAGA 58.049 39.130 0.00 0.00 0.00 3.41
105 106 4.988540 TGTGACAAGTAATTCCGAACAGAG 59.011 41.667 0.00 0.00 0.00 3.35
106 107 4.389077 GTGACAAGTAATTCCGAACAGAGG 59.611 45.833 0.00 0.00 0.00 3.69
107 108 3.933332 GACAAGTAATTCCGAACAGAGGG 59.067 47.826 0.00 0.00 0.00 4.30
108 109 3.581332 ACAAGTAATTCCGAACAGAGGGA 59.419 43.478 0.00 0.00 0.00 4.20
109 110 4.184629 CAAGTAATTCCGAACAGAGGGAG 58.815 47.826 0.00 0.00 33.01 4.30
110 111 3.442076 AGTAATTCCGAACAGAGGGAGT 58.558 45.455 0.00 0.00 33.01 3.85
111 112 4.607239 AGTAATTCCGAACAGAGGGAGTA 58.393 43.478 0.00 0.00 33.01 2.59
112 113 5.021458 AGTAATTCCGAACAGAGGGAGTAA 58.979 41.667 0.00 0.00 33.01 2.24
113 114 5.661759 AGTAATTCCGAACAGAGGGAGTAAT 59.338 40.000 0.00 0.00 33.01 1.89
114 115 5.437191 AATTCCGAACAGAGGGAGTAATT 57.563 39.130 0.00 0.00 33.01 1.40
115 116 4.903045 TTCCGAACAGAGGGAGTAATTT 57.097 40.909 0.00 0.00 33.01 1.82
116 117 6.555463 ATTCCGAACAGAGGGAGTAATTTA 57.445 37.500 0.00 0.00 33.01 1.40
117 118 6.555463 TTCCGAACAGAGGGAGTAATTTAT 57.445 37.500 0.00 0.00 33.01 1.40
118 119 7.664552 TTCCGAACAGAGGGAGTAATTTATA 57.335 36.000 0.00 0.00 33.01 0.98
119 120 7.047460 TCCGAACAGAGGGAGTAATTTATAC 57.953 40.000 0.00 0.00 0.00 1.47
120 121 5.919141 CCGAACAGAGGGAGTAATTTATACG 59.081 44.000 0.00 0.00 0.00 3.06
121 122 5.919141 CGAACAGAGGGAGTAATTTATACGG 59.081 44.000 0.00 0.00 0.00 4.02
122 123 5.211174 ACAGAGGGAGTAATTTATACGGC 57.789 43.478 0.00 0.00 0.00 5.68
123 124 4.040095 ACAGAGGGAGTAATTTATACGGCC 59.960 45.833 0.00 0.00 0.00 6.13
124 125 4.039973 CAGAGGGAGTAATTTATACGGCCA 59.960 45.833 2.24 0.00 0.00 5.36
125 126 4.657039 AGAGGGAGTAATTTATACGGCCAA 59.343 41.667 2.24 0.00 0.00 4.52
126 127 4.711399 AGGGAGTAATTTATACGGCCAAC 58.289 43.478 2.24 0.00 0.00 3.77
127 128 4.411212 AGGGAGTAATTTATACGGCCAACT 59.589 41.667 2.24 0.00 0.00 3.16
128 129 4.514066 GGGAGTAATTTATACGGCCAACTG 59.486 45.833 2.24 0.00 0.00 3.16
129 130 5.362263 GGAGTAATTTATACGGCCAACTGA 58.638 41.667 2.24 0.00 0.00 3.41
130 131 5.995897 GGAGTAATTTATACGGCCAACTGAT 59.004 40.000 2.24 0.00 0.00 2.90
131 132 6.147328 GGAGTAATTTATACGGCCAACTGATC 59.853 42.308 2.24 0.00 0.00 2.92
132 133 5.995897 AGTAATTTATACGGCCAACTGATCC 59.004 40.000 2.24 0.00 0.00 3.36
136 137 4.104143 CGGCCAACTGATCCGTAC 57.896 61.111 2.24 0.00 38.47 3.67
137 138 1.515954 CGGCCAACTGATCCGTACT 59.484 57.895 2.24 0.00 38.47 2.73
138 139 0.806102 CGGCCAACTGATCCGTACTG 60.806 60.000 2.24 0.00 38.47 2.74
139 140 1.090052 GGCCAACTGATCCGTACTGC 61.090 60.000 0.00 0.00 0.00 4.40
140 141 0.391130 GCCAACTGATCCGTACTGCA 60.391 55.000 0.00 0.00 0.00 4.41
141 142 1.359848 CCAACTGATCCGTACTGCAC 58.640 55.000 0.00 0.00 0.00 4.57
142 143 1.066858 CCAACTGATCCGTACTGCACT 60.067 52.381 0.00 0.00 0.00 4.40
143 144 2.165641 CCAACTGATCCGTACTGCACTA 59.834 50.000 0.00 0.00 0.00 2.74
144 145 3.439293 CAACTGATCCGTACTGCACTAG 58.561 50.000 0.00 0.00 0.00 2.57
145 146 2.724454 ACTGATCCGTACTGCACTAGT 58.276 47.619 0.00 0.00 43.56 2.57
146 147 3.882444 ACTGATCCGTACTGCACTAGTA 58.118 45.455 0.00 0.00 40.89 1.82
147 148 4.267536 ACTGATCCGTACTGCACTAGTAA 58.732 43.478 0.00 0.00 43.24 2.24
148 149 4.335874 ACTGATCCGTACTGCACTAGTAAG 59.664 45.833 0.00 0.00 43.24 2.34
149 150 3.066342 TGATCCGTACTGCACTAGTAAGC 59.934 47.826 0.00 0.00 43.24 3.09
150 151 2.719739 TCCGTACTGCACTAGTAAGCT 58.280 47.619 6.73 0.00 43.24 3.74
151 152 2.422479 TCCGTACTGCACTAGTAAGCTG 59.578 50.000 9.61 9.61 43.24 4.24
152 153 2.186076 CGTACTGCACTAGTAAGCTGC 58.814 52.381 10.73 4.07 43.24 5.25
153 154 2.415491 CGTACTGCACTAGTAAGCTGCA 60.415 50.000 1.02 8.06 43.24 4.41
157 158 3.401033 TGCACTAGTAAGCTGCAGAAA 57.599 42.857 20.43 0.00 35.92 2.52
158 159 3.942829 TGCACTAGTAAGCTGCAGAAAT 58.057 40.909 20.43 4.61 35.92 2.17
159 160 5.084818 TGCACTAGTAAGCTGCAGAAATA 57.915 39.130 20.43 3.51 35.92 1.40
160 161 4.870426 TGCACTAGTAAGCTGCAGAAATAC 59.130 41.667 20.43 15.82 35.92 1.89
161 162 5.112686 GCACTAGTAAGCTGCAGAAATACT 58.887 41.667 20.43 21.53 32.99 2.12
162 163 5.582665 GCACTAGTAAGCTGCAGAAATACTT 59.417 40.000 20.43 13.12 32.99 2.24
163 164 6.456181 GCACTAGTAAGCTGCAGAAATACTTG 60.456 42.308 20.43 21.29 32.99 3.16
164 165 6.813649 CACTAGTAAGCTGCAGAAATACTTGA 59.186 38.462 26.05 14.17 0.00 3.02
165 166 7.009999 CACTAGTAAGCTGCAGAAATACTTGAG 59.990 40.741 26.05 20.70 0.00 3.02
166 167 5.799213 AGTAAGCTGCAGAAATACTTGAGT 58.201 37.500 20.43 0.00 0.00 3.41
167 168 6.234177 AGTAAGCTGCAGAAATACTTGAGTT 58.766 36.000 20.43 0.00 0.00 3.01
168 169 5.619625 AAGCTGCAGAAATACTTGAGTTC 57.380 39.130 20.43 0.00 32.12 3.01
169 170 3.681897 AGCTGCAGAAATACTTGAGTTCG 59.318 43.478 20.43 0.00 37.22 3.95
170 171 3.181516 GCTGCAGAAATACTTGAGTTCGG 60.182 47.826 20.43 0.00 37.22 4.30
171 172 3.334691 TGCAGAAATACTTGAGTTCGGG 58.665 45.455 0.00 0.00 37.22 5.14
172 173 2.096013 GCAGAAATACTTGAGTTCGGGC 59.904 50.000 0.00 0.00 37.22 6.13
173 174 3.334691 CAGAAATACTTGAGTTCGGGCA 58.665 45.455 0.00 0.00 37.22 5.36
174 175 3.751175 CAGAAATACTTGAGTTCGGGCAA 59.249 43.478 0.00 0.00 37.22 4.52
175 176 4.396166 CAGAAATACTTGAGTTCGGGCAAT 59.604 41.667 0.00 0.00 37.22 3.56
176 177 4.636206 AGAAATACTTGAGTTCGGGCAATC 59.364 41.667 0.00 0.00 37.22 2.67
177 178 2.004583 TACTTGAGTTCGGGCAATCG 57.995 50.000 0.00 0.00 0.00 3.34
218 219 9.127277 TCACAAATATGTAACCTAAATTAGGCC 57.873 33.333 18.39 7.81 43.41 5.19
227 228 2.936498 CCTAAATTAGGCCTGACACACG 59.064 50.000 17.99 0.00 39.48 4.49
228 229 2.561478 AAATTAGGCCTGACACACGT 57.439 45.000 17.99 0.00 0.00 4.49
229 230 3.688694 AAATTAGGCCTGACACACGTA 57.311 42.857 17.99 0.00 0.00 3.57
230 231 2.667473 ATTAGGCCTGACACACGTAC 57.333 50.000 17.99 0.00 0.00 3.67
231 232 0.241749 TTAGGCCTGACACACGTACG 59.758 55.000 17.99 15.01 0.00 3.67
232 233 1.588824 TAGGCCTGACACACGTACGG 61.589 60.000 17.99 11.05 0.00 4.02
233 234 2.646719 GCCTGACACACGTACGGA 59.353 61.111 21.06 0.00 0.00 4.69
234 235 1.214589 GCCTGACACACGTACGGAT 59.785 57.895 21.06 3.70 0.00 4.18
235 236 0.389426 GCCTGACACACGTACGGATT 60.389 55.000 21.06 0.00 0.00 3.01
236 237 1.625616 CCTGACACACGTACGGATTC 58.374 55.000 21.06 10.46 0.00 2.52
237 238 1.201647 CCTGACACACGTACGGATTCT 59.798 52.381 21.06 0.00 0.00 2.40
238 239 2.516923 CTGACACACGTACGGATTCTC 58.483 52.381 21.06 7.64 0.00 2.87
239 240 2.156917 TGACACACGTACGGATTCTCT 58.843 47.619 21.06 0.00 0.00 3.10
240 241 2.555325 TGACACACGTACGGATTCTCTT 59.445 45.455 21.06 0.00 0.00 2.85
241 242 2.915463 GACACACGTACGGATTCTCTTG 59.085 50.000 21.06 8.42 0.00 3.02
242 243 2.295349 ACACACGTACGGATTCTCTTGT 59.705 45.455 21.06 9.10 0.00 3.16
243 244 3.243636 ACACACGTACGGATTCTCTTGTT 60.244 43.478 21.06 1.15 0.00 2.83
244 245 3.739300 CACACGTACGGATTCTCTTGTTT 59.261 43.478 21.06 0.00 0.00 2.83
250 251 5.121768 CGTACGGATTCTCTTGTTTGGATTT 59.878 40.000 7.57 0.00 0.00 2.17
252 253 7.148540 CGTACGGATTCTCTTGTTTGGATTTAA 60.149 37.037 7.57 0.00 0.00 1.52
255 256 8.244113 ACGGATTCTCTTGTTTGGATTTAATTC 58.756 33.333 0.00 0.00 0.00 2.17
260 261 5.933790 TCTTGTTTGGATTTAATTCGTCCG 58.066 37.500 0.00 0.00 34.72 4.79
267 268 4.152759 TGGATTTAATTCGTCCGTTGTCAC 59.847 41.667 0.00 0.00 34.72 3.67
274 275 0.790207 CGTCCGTTGTCACCAATCTG 59.210 55.000 0.00 0.00 32.11 2.90
283 284 5.116983 CGTTGTCACCAATCTGTATTTTTGC 59.883 40.000 0.00 0.00 32.11 3.68
299 300 2.474712 GCGTTTGCGTAGTCCTGC 59.525 61.111 0.00 0.00 40.81 4.85
302 303 0.438830 CGTTTGCGTAGTCCTGCTTC 59.561 55.000 0.00 0.00 0.00 3.86
307 308 1.550524 TGCGTAGTCCTGCTTCATCTT 59.449 47.619 0.00 0.00 0.00 2.40
313 314 2.909006 AGTCCTGCTTCATCTTCTTGGA 59.091 45.455 0.00 0.00 0.00 3.53
316 317 5.190528 AGTCCTGCTTCATCTTCTTGGATTA 59.809 40.000 0.00 0.00 0.00 1.75
317 318 6.060788 GTCCTGCTTCATCTTCTTGGATTAT 58.939 40.000 0.00 0.00 0.00 1.28
318 319 6.204495 GTCCTGCTTCATCTTCTTGGATTATC 59.796 42.308 0.00 0.00 0.00 1.75
347 348 5.062934 CGTCAAAGTTTAGTTCTGACACACA 59.937 40.000 4.49 0.00 36.95 3.72
349 350 5.584649 TCAAAGTTTAGTTCTGACACACAGG 59.415 40.000 0.00 0.00 45.76 4.00
377 462 9.112725 TCTAGCGTCAAATATGTACTACTGTAA 57.887 33.333 0.00 0.00 0.00 2.41
398 483 8.893219 TGTAAATTAGGCATGAGACTAGATTG 57.107 34.615 0.00 0.00 36.52 2.67
399 484 8.704668 TGTAAATTAGGCATGAGACTAGATTGA 58.295 33.333 0.00 0.00 36.52 2.57
400 485 9.717942 GTAAATTAGGCATGAGACTAGATTGAT 57.282 33.333 0.00 0.00 36.52 2.57
415 500 4.265073 AGATTGATCTAGCGCCAAAGTTT 58.735 39.130 2.29 0.00 34.85 2.66
427 512 4.142600 GCGCCAAAGTTTAGTTCTGATGAT 60.143 41.667 0.00 0.00 0.00 2.45
428 513 5.064707 GCGCCAAAGTTTAGTTCTGATGATA 59.935 40.000 0.00 0.00 0.00 2.15
429 514 6.238484 GCGCCAAAGTTTAGTTCTGATGATAT 60.238 38.462 0.00 0.00 0.00 1.63
464 549 5.102953 TGATCTTCCTGGTAATCACAAGG 57.897 43.478 0.00 0.00 46.30 3.61
471 556 3.131046 CCTGGTAATCACAAGGCCAATTC 59.869 47.826 5.01 0.00 39.10 2.17
480 565 7.716799 ATCACAAGGCCAATTCAAACTAATA 57.283 32.000 5.01 0.00 0.00 0.98
561 647 9.853555 AGAAATATTATCGTGTTTGCAAATTGA 57.146 25.926 16.21 13.47 0.00 2.57
574 665 8.838365 TGTTTGCAAATTGAAATGCTAGATTTT 58.162 25.926 16.21 0.00 42.97 1.82
685 777 7.609532 AGATTAGCTGCTGTTGTTTCTTCTATT 59.390 33.333 13.43 0.00 0.00 1.73
757 849 6.767902 TGATGCTTATTAAGTTGCTCCCTTAG 59.232 38.462 5.38 0.00 0.00 2.18
759 851 6.481643 TGCTTATTAAGTTGCTCCCTTAGTT 58.518 36.000 5.38 0.00 0.00 2.24
761 853 7.450323 TGCTTATTAAGTTGCTCCCTTAGTTTT 59.550 33.333 5.38 0.00 0.00 2.43
762 854 8.304596 GCTTATTAAGTTGCTCCCTTAGTTTTT 58.695 33.333 5.38 0.00 0.00 1.94
775 867 9.516546 CTCCCTTAGTTTTTAATTCCTGTAACT 57.483 33.333 0.00 0.00 0.00 2.24
862 954 6.939730 TCTAGATTTTGGTGATGCAAGTTGTA 59.060 34.615 4.48 0.00 0.00 2.41
863 955 6.017400 AGATTTTGGTGATGCAAGTTGTAG 57.983 37.500 4.48 0.00 0.00 2.74
864 956 5.536161 AGATTTTGGTGATGCAAGTTGTAGT 59.464 36.000 4.48 0.00 0.00 2.73
865 957 6.714810 AGATTTTGGTGATGCAAGTTGTAGTA 59.285 34.615 4.48 0.00 0.00 1.82
866 958 6.892658 TTTTGGTGATGCAAGTTGTAGTAT 57.107 33.333 4.48 0.00 0.00 2.12
867 959 6.494893 TTTGGTGATGCAAGTTGTAGTATC 57.505 37.500 4.48 4.98 0.00 2.24
946 1038 4.732285 ATTGTTGTCACTTCTTACTGCG 57.268 40.909 0.00 0.00 0.00 5.18
972 1064 9.088512 GGTCACTACTGATAACTCAACTTATTG 57.911 37.037 0.00 0.00 37.14 1.90
1020 1112 5.688823 TGAATGCTCACACATTTAACTTCG 58.311 37.500 0.00 0.00 40.31 3.79
1047 1141 2.691409 TGATCCTCGGAAATGGTGTC 57.309 50.000 0.00 0.00 0.00 3.67
1055 1149 1.340017 CGGAAATGGTGTCCCTGATGT 60.340 52.381 0.00 0.00 0.00 3.06
1094 1200 3.241530 TGCACTGGCCCTCGACTT 61.242 61.111 0.00 0.00 40.13 3.01
1095 1201 2.743928 GCACTGGCCCTCGACTTG 60.744 66.667 0.00 0.00 0.00 3.16
1299 1630 1.379044 CTTTGAGCCCGCCCTTGAT 60.379 57.895 0.00 0.00 0.00 2.57
1307 1641 1.442769 CCCGCCCTTGATATTCATCG 58.557 55.000 0.00 0.00 33.51 3.84
1332 1670 7.274033 CGCATTGATGAGTTTGACATTTGTAAT 59.726 33.333 0.00 0.00 0.00 1.89
1365 1707 7.651808 ACATTCTTCTCTTGTATGGTTTGTTG 58.348 34.615 0.00 0.00 0.00 3.33
1444 1786 3.620821 TCGCTCATTCGTCATATGCAAAA 59.379 39.130 0.00 0.00 0.00 2.44
1536 1878 1.301293 GGGGCTGCTGCTTTCTACT 59.699 57.895 15.64 0.00 39.59 2.57
1537 1879 0.746204 GGGGCTGCTGCTTTCTACTC 60.746 60.000 15.64 0.00 39.59 2.59
1538 1880 0.746204 GGGCTGCTGCTTTCTACTCC 60.746 60.000 15.64 1.62 39.59 3.85
1539 1881 0.746204 GGCTGCTGCTTTCTACTCCC 60.746 60.000 15.64 0.00 39.59 4.30
1540 1882 0.251634 GCTGCTGCTTTCTACTCCCT 59.748 55.000 8.53 0.00 36.03 4.20
1541 1883 1.742071 GCTGCTGCTTTCTACTCCCTC 60.742 57.143 8.53 0.00 36.03 4.30
1542 1884 0.905357 TGCTGCTTTCTACTCCCTCC 59.095 55.000 0.00 0.00 0.00 4.30
1543 1885 0.179097 GCTGCTTTCTACTCCCTCCG 60.179 60.000 0.00 0.00 0.00 4.63
1544 1886 1.187087 CTGCTTTCTACTCCCTCCGT 58.813 55.000 0.00 0.00 0.00 4.69
1545 1887 1.550976 CTGCTTTCTACTCCCTCCGTT 59.449 52.381 0.00 0.00 0.00 4.44
1546 1888 1.549170 TGCTTTCTACTCCCTCCGTTC 59.451 52.381 0.00 0.00 0.00 3.95
1547 1889 1.469423 GCTTTCTACTCCCTCCGTTCG 60.469 57.143 0.00 0.00 0.00 3.95
1548 1890 1.134560 CTTTCTACTCCCTCCGTTCGG 59.865 57.143 4.74 4.74 0.00 4.30
1549 1891 0.329261 TTCTACTCCCTCCGTTCGGA 59.671 55.000 13.34 13.34 0.00 4.55
1550 1892 0.329261 TCTACTCCCTCCGTTCGGAA 59.671 55.000 14.79 0.04 33.41 4.30
1551 1893 1.064166 TCTACTCCCTCCGTTCGGAAT 60.064 52.381 14.79 2.09 33.41 3.01
1552 1894 1.755380 CTACTCCCTCCGTTCGGAATT 59.245 52.381 14.79 0.00 33.41 2.17
1553 1895 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
1554 1896 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
1555 1897 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
1556 1898 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
1557 1899 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
1558 1900 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
1559 1901 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
1560 1902 3.581755 CTCCGTTCGGAATTACTTGTCA 58.418 45.455 14.79 0.00 33.41 3.58
1561 1903 3.319755 TCCGTTCGGAATTACTTGTCAC 58.680 45.455 11.66 0.00 0.00 3.67
1562 1904 3.061322 CCGTTCGGAATTACTTGTCACA 58.939 45.455 5.19 0.00 0.00 3.58
1563 1905 3.495377 CCGTTCGGAATTACTTGTCACAA 59.505 43.478 5.19 0.00 0.00 3.33
1564 1906 4.024725 CCGTTCGGAATTACTTGTCACAAA 60.025 41.667 5.19 0.00 0.00 2.83
1565 1907 5.503498 CGTTCGGAATTACTTGTCACAAAA 58.497 37.500 0.00 0.00 0.00 2.44
1566 1908 5.966503 CGTTCGGAATTACTTGTCACAAAAA 59.033 36.000 0.00 0.00 0.00 1.94
1567 1909 6.635239 CGTTCGGAATTACTTGTCACAAAAAT 59.365 34.615 0.00 0.00 0.00 1.82
1568 1910 7.357206 CGTTCGGAATTACTTGTCACAAAAATG 60.357 37.037 0.00 0.00 0.00 2.32
1569 1911 6.442952 TCGGAATTACTTGTCACAAAAATGG 58.557 36.000 0.00 0.00 0.00 3.16
1570 1912 6.263392 TCGGAATTACTTGTCACAAAAATGGA 59.737 34.615 0.00 0.00 0.00 3.41
1571 1913 7.040062 TCGGAATTACTTGTCACAAAAATGGAT 60.040 33.333 0.00 0.00 0.00 3.41
1572 1914 7.062138 CGGAATTACTTGTCACAAAAATGGATG 59.938 37.037 0.00 0.00 0.00 3.51
1573 1915 7.872483 GGAATTACTTGTCACAAAAATGGATGT 59.128 33.333 0.00 0.00 0.00 3.06
1574 1916 9.906660 GAATTACTTGTCACAAAAATGGATGTA 57.093 29.630 0.00 0.00 0.00 2.29
1577 1919 7.765695 ACTTGTCACAAAAATGGATGTATCT 57.234 32.000 0.00 0.00 0.00 1.98
1578 1920 8.862325 ACTTGTCACAAAAATGGATGTATCTA 57.138 30.769 0.00 0.00 0.00 1.98
1579 1921 8.730680 ACTTGTCACAAAAATGGATGTATCTAC 58.269 33.333 0.00 0.00 0.00 2.59
1580 1922 8.628630 TTGTCACAAAAATGGATGTATCTACA 57.371 30.769 0.00 0.00 40.98 2.74
1581 1923 8.628630 TGTCACAAAAATGGATGTATCTACAA 57.371 30.769 0.00 0.00 39.99 2.41
1582 1924 8.511321 TGTCACAAAAATGGATGTATCTACAAC 58.489 33.333 0.00 0.00 39.99 3.32
1583 1925 8.730680 GTCACAAAAATGGATGTATCTACAACT 58.269 33.333 0.00 0.00 39.99 3.16
1584 1926 9.952030 TCACAAAAATGGATGTATCTACAACTA 57.048 29.630 0.00 0.00 39.99 2.24
1615 1957 9.469807 ACATCTAGATACATTCATTTCTCGAAC 57.530 33.333 4.54 0.00 0.00 3.95
1616 1958 8.634265 CATCTAGATACATTCATTTCTCGAACG 58.366 37.037 4.54 0.00 0.00 3.95
1617 1959 7.927048 TCTAGATACATTCATTTCTCGAACGA 58.073 34.615 0.00 0.00 0.00 3.85
1618 1960 8.070769 TCTAGATACATTCATTTCTCGAACGAG 58.929 37.037 16.63 16.63 43.21 4.18
1619 1961 6.565234 AGATACATTCATTTCTCGAACGAGT 58.435 36.000 20.76 2.55 42.49 4.18
1620 1962 7.704271 AGATACATTCATTTCTCGAACGAGTA 58.296 34.615 20.76 11.10 42.49 2.59
1621 1963 8.188799 AGATACATTCATTTCTCGAACGAGTAA 58.811 33.333 20.76 18.19 42.49 2.24
1622 1964 8.873215 ATACATTCATTTCTCGAACGAGTAAT 57.127 30.769 20.76 19.38 40.97 1.89
1623 1965 7.596749 ACATTCATTTCTCGAACGAGTAATT 57.403 32.000 20.25 8.90 39.22 1.40
1624 1966 7.676393 ACATTCATTTCTCGAACGAGTAATTC 58.324 34.615 20.25 0.00 39.22 2.17
1625 1967 6.642683 TTCATTTCTCGAACGAGTAATTCC 57.357 37.500 20.25 0.00 39.22 3.01
1626 1968 4.796830 TCATTTCTCGAACGAGTAATTCCG 59.203 41.667 20.25 12.86 39.22 4.30
1627 1969 4.424061 TTTCTCGAACGAGTAATTCCGA 57.576 40.909 20.76 0.16 42.49 4.55
1628 1970 4.424061 TTCTCGAACGAGTAATTCCGAA 57.576 40.909 20.76 5.83 42.49 4.30
1629 1971 3.751621 TCTCGAACGAGTAATTCCGAAC 58.248 45.455 20.76 0.00 42.49 3.95
1630 1972 2.508867 TCGAACGAGTAATTCCGAACG 58.491 47.619 0.00 0.00 0.00 3.95
1631 1973 1.580704 CGAACGAGTAATTCCGAACGG 59.419 52.381 6.94 6.94 0.00 4.44
1632 1974 2.728846 CGAACGAGTAATTCCGAACGGA 60.729 50.000 12.04 12.04 43.52 4.69
1633 1975 2.556534 ACGAGTAATTCCGAACGGAG 57.443 50.000 15.34 5.60 46.06 4.63
1634 1976 1.133790 ACGAGTAATTCCGAACGGAGG 59.866 52.381 15.34 4.28 46.06 4.30
1635 1977 1.535437 CGAGTAATTCCGAACGGAGGG 60.535 57.143 15.34 0.00 46.06 4.30
1636 1978 1.753073 GAGTAATTCCGAACGGAGGGA 59.247 52.381 15.34 2.49 46.06 4.20
1637 1979 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
1638 1980 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
1639 1981 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
1640 1982 1.109609 ATTCCGAACGGAGGGAGTAC 58.890 55.000 15.34 0.00 46.06 2.73
1773 2115 5.047802 TCTGAATTTGGGCTTTCTTGATCAC 60.048 40.000 0.00 0.00 0.00 3.06
1839 2472 1.697982 ACCTTGTTACTGGAGTGGACC 59.302 52.381 2.50 0.00 0.00 4.46
1928 2571 6.184580 AGAGTATAGTCGACTTGTTCACAG 57.815 41.667 25.44 0.00 0.00 3.66
1988 2631 8.879759 ACTACATACATATACACAAACACAAGC 58.120 33.333 0.00 0.00 0.00 4.01
1997 2640 3.812609 ACACAAACACAAGCGTGATGATA 59.187 39.130 6.65 0.00 46.80 2.15
2001 2644 5.048782 ACAAACACAAGCGTGATGATAACAT 60.049 36.000 6.65 0.00 46.80 2.71
2030 2673 1.888512 AGTTAAGCGTCGGTCCACTTA 59.111 47.619 0.00 0.00 0.00 2.24
2056 2699 0.693767 CATCTTCTCCCTCTGCCCCT 60.694 60.000 0.00 0.00 0.00 4.79
2061 2706 2.040606 TCCCTCTGCCCCTACACC 59.959 66.667 0.00 0.00 0.00 4.16
2126 2771 0.693049 GTGGTGTGGAAGTGGATCCT 59.307 55.000 14.23 0.00 40.35 3.24
2127 2772 0.692476 TGGTGTGGAAGTGGATCCTG 59.308 55.000 14.23 0.00 40.35 3.86
2136 2781 0.625683 AGTGGATCCTGGGGAAGCAT 60.626 55.000 14.23 0.00 34.34 3.79
2139 2784 0.179006 GGATCCTGGGGAAGCATGAC 60.179 60.000 3.84 0.00 34.34 3.06
2140 2785 0.179006 GATCCTGGGGAAGCATGACC 60.179 60.000 0.00 0.00 34.34 4.02
2161 2839 0.896226 GGAGGCCGAGTAGTTGTCTT 59.104 55.000 0.00 0.00 0.00 3.01
2165 2843 1.351153 GCCGAGTAGTTGTCTTGCTC 58.649 55.000 0.00 0.00 0.00 4.26
2175 2853 3.565214 TCTTGCTCGTTGGGGCCA 61.565 61.111 4.39 0.00 0.00 5.36
2188 2866 4.785453 GGCCAAGGAGGGACGCAG 62.785 72.222 0.00 0.00 38.09 5.18
2217 2895 2.044946 AATCTTGCCACCCGCTCC 60.045 61.111 0.00 0.00 38.78 4.70
2267 2945 3.576648 GAGATATGCCAACGGTACTAGC 58.423 50.000 0.00 0.00 0.00 3.42
2268 2946 3.231818 AGATATGCCAACGGTACTAGCT 58.768 45.455 0.00 0.00 0.00 3.32
2269 2947 4.404640 AGATATGCCAACGGTACTAGCTA 58.595 43.478 0.00 0.00 0.00 3.32
2270 2948 4.459685 AGATATGCCAACGGTACTAGCTAG 59.540 45.833 19.44 19.44 0.00 3.42
2311 2989 4.736896 GGGCGACGTGGACCTGTC 62.737 72.222 16.33 7.22 0.00 3.51
2315 2993 4.240049 GACGTGGACCTGTCGAAC 57.760 61.111 0.00 0.00 0.00 3.95
2316 2994 1.728426 GACGTGGACCTGTCGAACG 60.728 63.158 17.31 17.31 42.34 3.95
2317 2995 2.430244 CGTGGACCTGTCGAACGG 60.430 66.667 13.29 0.00 36.98 4.44
2325 3003 3.530910 CTGTCGAACGGGTGGCCTT 62.531 63.158 3.32 0.00 0.00 4.35
2326 3004 2.281276 GTCGAACGGGTGGCCTTT 60.281 61.111 3.32 0.00 0.00 3.11
2327 3005 2.281208 TCGAACGGGTGGCCTTTG 60.281 61.111 3.32 0.00 0.00 2.77
2406 3118 1.079405 GTCGGATGACCTGCGGAAA 60.079 57.895 0.00 0.00 39.47 3.13
2414 3126 3.358111 TGACCTGCGGAAAATTATGGA 57.642 42.857 0.00 0.00 0.00 3.41
2417 3129 1.338020 CCTGCGGAAAATTATGGAGCC 59.662 52.381 0.00 0.00 0.00 4.70
2436 3148 2.497138 CCGACATGCATCACACCATAT 58.503 47.619 0.00 0.00 0.00 1.78
2513 3230 1.518367 TGGAGTTTCTTCACCCCTGT 58.482 50.000 0.00 0.00 0.00 4.00
2514 3231 2.696775 TGGAGTTTCTTCACCCCTGTA 58.303 47.619 0.00 0.00 0.00 2.74
2515 3232 3.256704 TGGAGTTTCTTCACCCCTGTAT 58.743 45.455 0.00 0.00 0.00 2.29
2531 3249 9.586435 CACCCCTGTATTTTAAATCTGAAAATC 57.414 33.333 0.00 0.00 37.59 2.17
2544 3262 8.924511 AAATCTGAAAATCCAACTCAGAGTTA 57.075 30.769 15.73 1.69 46.74 2.24
2548 3266 8.816894 TCTGAAAATCCAACTCAGAGTTATAGT 58.183 33.333 15.73 3.57 40.44 2.12
2574 3312 6.266103 TCTGTTTCTCATCCTTTTGAATTGCT 59.734 34.615 0.00 0.00 0.00 3.91
2575 3313 7.448161 TCTGTTTCTCATCCTTTTGAATTGCTA 59.552 33.333 0.00 0.00 0.00 3.49
2581 3319 9.466497 TCTCATCCTTTTGAATTGCTAGTTATT 57.534 29.630 0.00 0.00 0.00 1.40
2596 3334 4.825199 AGTTATTAGCCCCTCTCTCTCT 57.175 45.455 0.00 0.00 0.00 3.10
2601 3339 0.325203 AGCCCCTCTCTCTCTGGAAC 60.325 60.000 0.00 0.00 0.00 3.62
2619 3357 1.800805 ACGAAGTGCAGGTTGATGAG 58.199 50.000 0.00 0.00 42.51 2.90
2636 3374 1.202794 TGAGCTGCAACATTGGACAGA 60.203 47.619 1.02 0.00 31.67 3.41
2642 3380 1.952367 GCAACATTGGACAGAGAGGGG 60.952 57.143 0.00 0.00 0.00 4.79
2654 3392 3.715097 GAGGGGTGCAGCAGCTCT 61.715 66.667 27.31 27.31 45.98 4.09
2655 3393 2.284921 AGGGGTGCAGCAGCTCTA 60.285 61.111 25.90 0.00 41.19 2.43
2656 3394 2.188994 GGGGTGCAGCAGCTCTAG 59.811 66.667 23.44 0.00 42.74 2.43
2657 3395 2.362369 GGGGTGCAGCAGCTCTAGA 61.362 63.158 23.44 0.00 42.74 2.43
2658 3396 1.599047 GGGTGCAGCAGCTCTAGAA 59.401 57.895 23.44 0.00 42.74 2.10
2659 3397 0.742635 GGGTGCAGCAGCTCTAGAAC 60.743 60.000 23.44 1.82 42.74 3.01
2735 3476 0.955178 ATCGATCGATCTCAGCCGTT 59.045 50.000 24.60 0.00 0.00 4.44
2736 3477 0.029433 TCGATCGATCTCAGCCGTTG 59.971 55.000 22.43 4.50 0.00 4.10
2738 3479 1.335415 CGATCGATCTCAGCCGTTGAT 60.335 52.381 22.43 0.00 34.68 2.57
2741 3482 3.946950 GATCTCAGCCGTTGATCGA 57.053 52.632 0.00 0.00 42.86 3.59
2745 3486 1.667154 CTCAGCCGTTGATCGAGGGA 61.667 60.000 23.33 3.94 42.86 4.20
2757 3498 2.670148 CGAGGGACCCAAGGGAAGG 61.670 68.421 14.60 0.00 38.96 3.46
2758 3499 1.229853 GAGGGACCCAAGGGAAGGA 60.230 63.158 14.60 0.00 38.96 3.36
2761 3502 2.269241 GACCCAAGGGAAGGAGCG 59.731 66.667 13.15 0.00 38.96 5.03
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.306805 TCCGAACAGAGGGAGTACTACA 59.693 50.000 7.57 0.00 0.00 2.74
1 2 2.996631 TCCGAACAGAGGGAGTACTAC 58.003 52.381 0.00 0.00 0.00 2.73
2 3 3.726557 TTCCGAACAGAGGGAGTACTA 57.273 47.619 0.00 0.00 33.01 1.82
3 4 2.599408 TTCCGAACAGAGGGAGTACT 57.401 50.000 0.00 0.00 33.01 2.73
4 5 3.889520 AATTCCGAACAGAGGGAGTAC 57.110 47.619 0.00 0.00 33.01 2.73
5 6 4.607239 AGTAATTCCGAACAGAGGGAGTA 58.393 43.478 0.00 0.00 33.01 2.59
6 7 3.442076 AGTAATTCCGAACAGAGGGAGT 58.558 45.455 0.00 0.00 33.01 3.85
7 8 3.489398 CGAGTAATTCCGAACAGAGGGAG 60.489 52.174 0.00 0.00 33.01 4.30
8 9 2.426024 CGAGTAATTCCGAACAGAGGGA 59.574 50.000 0.00 0.00 0.00 4.20
9 10 2.165845 ACGAGTAATTCCGAACAGAGGG 59.834 50.000 0.00 0.00 0.00 4.30
10 11 3.436496 GACGAGTAATTCCGAACAGAGG 58.564 50.000 0.00 0.00 0.00 3.69
11 12 3.119602 TGGACGAGTAATTCCGAACAGAG 60.120 47.826 0.00 0.00 0.00 3.35
12 13 2.821378 TGGACGAGTAATTCCGAACAGA 59.179 45.455 0.00 0.00 0.00 3.41
13 14 3.226346 TGGACGAGTAATTCCGAACAG 57.774 47.619 0.00 0.00 0.00 3.16
14 15 3.256383 TCTTGGACGAGTAATTCCGAACA 59.744 43.478 0.00 0.00 0.00 3.18
15 16 3.841643 TCTTGGACGAGTAATTCCGAAC 58.158 45.455 0.00 0.00 0.00 3.95
16 17 4.524316 TTCTTGGACGAGTAATTCCGAA 57.476 40.909 0.00 0.00 0.00 4.30
17 18 4.524316 TTTCTTGGACGAGTAATTCCGA 57.476 40.909 0.00 0.00 0.00 4.55
18 19 4.868171 TCATTTCTTGGACGAGTAATTCCG 59.132 41.667 0.00 0.00 0.00 4.30
19 20 6.543736 GTTCATTTCTTGGACGAGTAATTCC 58.456 40.000 0.00 0.00 0.00 3.01
29 30 7.277981 ACATCTACATACGTTCATTTCTTGGAC 59.722 37.037 0.00 0.00 0.00 4.02
30 31 7.327975 ACATCTACATACGTTCATTTCTTGGA 58.672 34.615 0.00 0.00 0.00 3.53
31 32 7.539712 ACATCTACATACGTTCATTTCTTGG 57.460 36.000 0.00 0.00 0.00 3.61
60 61 9.825109 TCACAAAAATGGATGTATCTACGATTA 57.175 29.630 0.00 0.00 0.00 1.75
61 62 8.612619 GTCACAAAAATGGATGTATCTACGATT 58.387 33.333 0.00 0.00 0.00 3.34
62 63 7.768582 TGTCACAAAAATGGATGTATCTACGAT 59.231 33.333 0.00 0.00 0.00 3.73
63 64 7.100409 TGTCACAAAAATGGATGTATCTACGA 58.900 34.615 0.00 0.00 0.00 3.43
64 65 7.302350 TGTCACAAAAATGGATGTATCTACG 57.698 36.000 0.00 0.00 0.00 3.51
65 66 8.730680 ACTTGTCACAAAAATGGATGTATCTAC 58.269 33.333 0.00 0.00 0.00 2.59
66 67 8.862325 ACTTGTCACAAAAATGGATGTATCTA 57.138 30.769 0.00 0.00 0.00 1.98
67 68 7.765695 ACTTGTCACAAAAATGGATGTATCT 57.234 32.000 0.00 0.00 0.00 1.98
70 71 9.906660 GAATTACTTGTCACAAAAATGGATGTA 57.093 29.630 0.00 0.00 0.00 2.29
71 72 7.872483 GGAATTACTTGTCACAAAAATGGATGT 59.128 33.333 0.00 0.00 0.00 3.06
72 73 7.062138 CGGAATTACTTGTCACAAAAATGGATG 59.938 37.037 0.00 0.00 0.00 3.51
73 74 7.040062 TCGGAATTACTTGTCACAAAAATGGAT 60.040 33.333 0.00 0.00 0.00 3.41
74 75 6.263392 TCGGAATTACTTGTCACAAAAATGGA 59.737 34.615 0.00 0.00 0.00 3.41
75 76 6.442952 TCGGAATTACTTGTCACAAAAATGG 58.557 36.000 0.00 0.00 0.00 3.16
76 77 7.433719 TGTTCGGAATTACTTGTCACAAAAATG 59.566 33.333 0.00 0.00 0.00 2.32
77 78 7.484975 TGTTCGGAATTACTTGTCACAAAAAT 58.515 30.769 0.00 0.00 0.00 1.82
78 79 6.853720 TGTTCGGAATTACTTGTCACAAAAA 58.146 32.000 0.00 0.00 0.00 1.94
79 80 6.316640 TCTGTTCGGAATTACTTGTCACAAAA 59.683 34.615 0.00 0.00 0.00 2.44
80 81 5.818336 TCTGTTCGGAATTACTTGTCACAAA 59.182 36.000 0.00 0.00 0.00 2.83
81 82 5.361427 TCTGTTCGGAATTACTTGTCACAA 58.639 37.500 0.00 0.00 0.00 3.33
82 83 4.951254 TCTGTTCGGAATTACTTGTCACA 58.049 39.130 0.00 0.00 0.00 3.58
83 84 4.389077 CCTCTGTTCGGAATTACTTGTCAC 59.611 45.833 0.00 0.00 0.00 3.67
84 85 4.562757 CCCTCTGTTCGGAATTACTTGTCA 60.563 45.833 0.00 0.00 0.00 3.58
85 86 3.933332 CCCTCTGTTCGGAATTACTTGTC 59.067 47.826 0.00 0.00 0.00 3.18
86 87 3.581332 TCCCTCTGTTCGGAATTACTTGT 59.419 43.478 0.00 0.00 0.00 3.16
87 88 4.184629 CTCCCTCTGTTCGGAATTACTTG 58.815 47.826 0.00 0.00 0.00 3.16
88 89 3.838903 ACTCCCTCTGTTCGGAATTACTT 59.161 43.478 0.00 0.00 0.00 2.24
89 90 3.442076 ACTCCCTCTGTTCGGAATTACT 58.558 45.455 0.00 0.00 0.00 2.24
90 91 3.889520 ACTCCCTCTGTTCGGAATTAC 57.110 47.619 0.00 0.00 0.00 1.89
91 92 6.555463 AATTACTCCCTCTGTTCGGAATTA 57.445 37.500 0.00 0.00 0.00 1.40
92 93 5.437191 AATTACTCCCTCTGTTCGGAATT 57.563 39.130 0.00 0.00 0.00 2.17
93 94 5.437191 AAATTACTCCCTCTGTTCGGAAT 57.563 39.130 0.00 0.00 0.00 3.01
94 95 4.903045 AAATTACTCCCTCTGTTCGGAA 57.097 40.909 0.00 0.00 0.00 4.30
95 96 6.238842 CGTATAAATTACTCCCTCTGTTCGGA 60.239 42.308 0.00 0.00 0.00 4.55
96 97 5.919141 CGTATAAATTACTCCCTCTGTTCGG 59.081 44.000 0.00 0.00 0.00 4.30
97 98 5.919141 CCGTATAAATTACTCCCTCTGTTCG 59.081 44.000 0.00 0.00 0.00 3.95
98 99 5.695363 GCCGTATAAATTACTCCCTCTGTTC 59.305 44.000 0.00 0.00 0.00 3.18
99 100 5.454329 GGCCGTATAAATTACTCCCTCTGTT 60.454 44.000 0.00 0.00 0.00 3.16
100 101 4.040095 GGCCGTATAAATTACTCCCTCTGT 59.960 45.833 0.00 0.00 0.00 3.41
101 102 4.039973 TGGCCGTATAAATTACTCCCTCTG 59.960 45.833 0.00 0.00 0.00 3.35
102 103 4.228824 TGGCCGTATAAATTACTCCCTCT 58.771 43.478 0.00 0.00 0.00 3.69
103 104 4.612264 TGGCCGTATAAATTACTCCCTC 57.388 45.455 0.00 0.00 0.00 4.30
104 105 4.411212 AGTTGGCCGTATAAATTACTCCCT 59.589 41.667 0.00 0.00 0.00 4.20
105 106 4.514066 CAGTTGGCCGTATAAATTACTCCC 59.486 45.833 0.00 0.00 0.00 4.30
106 107 5.362263 TCAGTTGGCCGTATAAATTACTCC 58.638 41.667 0.00 0.00 0.00 3.85
107 108 6.147328 GGATCAGTTGGCCGTATAAATTACTC 59.853 42.308 0.00 0.00 0.00 2.59
108 109 5.995897 GGATCAGTTGGCCGTATAAATTACT 59.004 40.000 0.00 0.00 0.00 2.24
109 110 5.107220 CGGATCAGTTGGCCGTATAAATTAC 60.107 44.000 0.00 0.00 40.17 1.89
110 111 4.992319 CGGATCAGTTGGCCGTATAAATTA 59.008 41.667 0.00 0.00 40.17 1.40
111 112 3.813166 CGGATCAGTTGGCCGTATAAATT 59.187 43.478 0.00 0.00 40.17 1.82
112 113 3.399330 CGGATCAGTTGGCCGTATAAAT 58.601 45.455 0.00 0.00 40.17 1.40
113 114 2.828877 CGGATCAGTTGGCCGTATAAA 58.171 47.619 0.00 0.00 40.17 1.40
114 115 2.519377 CGGATCAGTTGGCCGTATAA 57.481 50.000 0.00 0.00 40.17 0.98
120 121 1.090052 GCAGTACGGATCAGTTGGCC 61.090 60.000 3.18 0.00 0.00 5.36
121 122 0.391130 TGCAGTACGGATCAGTTGGC 60.391 55.000 3.18 6.55 0.00 4.52
122 123 1.066858 AGTGCAGTACGGATCAGTTGG 60.067 52.381 3.18 0.00 0.00 3.77
123 124 2.370281 AGTGCAGTACGGATCAGTTG 57.630 50.000 3.18 0.00 0.00 3.16
124 125 3.090037 ACTAGTGCAGTACGGATCAGTT 58.910 45.455 3.18 0.00 34.98 3.16
125 126 2.724454 ACTAGTGCAGTACGGATCAGT 58.276 47.619 3.43 3.43 34.98 3.41
126 127 4.790123 GCTTACTAGTGCAGTACGGATCAG 60.790 50.000 5.39 0.00 39.52 2.90
127 128 3.066342 GCTTACTAGTGCAGTACGGATCA 59.934 47.826 5.39 0.00 39.52 2.92
128 129 3.315749 AGCTTACTAGTGCAGTACGGATC 59.684 47.826 5.39 0.00 39.52 3.36
129 130 3.066900 CAGCTTACTAGTGCAGTACGGAT 59.933 47.826 5.39 0.00 39.52 4.18
130 131 2.422479 CAGCTTACTAGTGCAGTACGGA 59.578 50.000 5.39 0.00 39.52 4.69
131 132 2.798680 CAGCTTACTAGTGCAGTACGG 58.201 52.381 5.39 0.00 39.52 4.02
132 133 2.186076 GCAGCTTACTAGTGCAGTACG 58.814 52.381 5.39 0.00 39.52 3.67
133 134 3.232213 TGCAGCTTACTAGTGCAGTAC 57.768 47.619 5.39 0.00 42.20 2.73
137 138 3.401033 TTTCTGCAGCTTACTAGTGCA 57.599 42.857 9.47 5.18 44.80 4.57
138 139 5.112686 AGTATTTCTGCAGCTTACTAGTGC 58.887 41.667 9.47 0.66 37.73 4.40
139 140 6.813649 TCAAGTATTTCTGCAGCTTACTAGTG 59.186 38.462 9.47 11.11 0.00 2.74
140 141 6.936279 TCAAGTATTTCTGCAGCTTACTAGT 58.064 36.000 9.47 0.00 0.00 2.57
141 142 7.038659 ACTCAAGTATTTCTGCAGCTTACTAG 58.961 38.462 9.47 12.15 0.00 2.57
142 143 6.936279 ACTCAAGTATTTCTGCAGCTTACTA 58.064 36.000 9.47 1.64 0.00 1.82
143 144 5.799213 ACTCAAGTATTTCTGCAGCTTACT 58.201 37.500 9.47 12.34 0.00 2.24
144 145 6.487689 AACTCAAGTATTTCTGCAGCTTAC 57.512 37.500 9.47 10.26 0.00 2.34
145 146 5.348724 CGAACTCAAGTATTTCTGCAGCTTA 59.651 40.000 9.47 0.00 0.00 3.09
146 147 4.153117 CGAACTCAAGTATTTCTGCAGCTT 59.847 41.667 9.47 3.02 0.00 3.74
147 148 3.681897 CGAACTCAAGTATTTCTGCAGCT 59.318 43.478 9.47 0.00 0.00 4.24
148 149 3.181516 CCGAACTCAAGTATTTCTGCAGC 60.182 47.826 9.47 0.00 0.00 5.25
149 150 3.372206 CCCGAACTCAAGTATTTCTGCAG 59.628 47.826 7.63 7.63 0.00 4.41
150 151 3.334691 CCCGAACTCAAGTATTTCTGCA 58.665 45.455 0.00 0.00 0.00 4.41
151 152 2.096013 GCCCGAACTCAAGTATTTCTGC 59.904 50.000 0.00 0.00 0.00 4.26
152 153 3.334691 TGCCCGAACTCAAGTATTTCTG 58.665 45.455 0.00 0.00 0.00 3.02
153 154 3.695830 TGCCCGAACTCAAGTATTTCT 57.304 42.857 0.00 0.00 0.00 2.52
154 155 4.494199 CGATTGCCCGAACTCAAGTATTTC 60.494 45.833 0.00 0.00 0.00 2.17
155 156 3.374058 CGATTGCCCGAACTCAAGTATTT 59.626 43.478 0.00 0.00 0.00 1.40
156 157 2.936498 CGATTGCCCGAACTCAAGTATT 59.064 45.455 0.00 0.00 0.00 1.89
157 158 2.093658 ACGATTGCCCGAACTCAAGTAT 60.094 45.455 0.00 0.00 0.00 2.12
158 159 1.274167 ACGATTGCCCGAACTCAAGTA 59.726 47.619 0.00 0.00 0.00 2.24
159 160 0.034896 ACGATTGCCCGAACTCAAGT 59.965 50.000 0.00 0.00 0.00 3.16
160 161 1.156736 AACGATTGCCCGAACTCAAG 58.843 50.000 0.00 0.00 0.00 3.02
161 162 1.533731 GAAACGATTGCCCGAACTCAA 59.466 47.619 0.00 0.00 0.00 3.02
162 163 1.153353 GAAACGATTGCCCGAACTCA 58.847 50.000 0.00 0.00 0.00 3.41
163 164 1.439679 AGAAACGATTGCCCGAACTC 58.560 50.000 0.00 0.00 0.00 3.01
164 165 1.535462 CAAGAAACGATTGCCCGAACT 59.465 47.619 0.00 0.00 0.00 3.01
165 166 1.265905 ACAAGAAACGATTGCCCGAAC 59.734 47.619 0.00 0.00 0.00 3.95
166 167 1.600023 ACAAGAAACGATTGCCCGAA 58.400 45.000 0.00 0.00 0.00 4.30
167 168 1.600023 AACAAGAAACGATTGCCCGA 58.400 45.000 0.00 0.00 0.00 5.14
168 169 2.415697 AAACAAGAAACGATTGCCCG 57.584 45.000 0.00 0.00 0.00 6.13
169 170 4.157840 AGGATAAACAAGAAACGATTGCCC 59.842 41.667 0.00 0.00 0.00 5.36
170 171 5.106317 TGAGGATAAACAAGAAACGATTGCC 60.106 40.000 0.00 0.00 0.00 4.52
171 172 5.795441 GTGAGGATAAACAAGAAACGATTGC 59.205 40.000 0.00 0.00 0.00 3.56
172 173 6.898041 TGTGAGGATAAACAAGAAACGATTG 58.102 36.000 0.00 0.00 0.00 2.67
173 174 7.504924 TTGTGAGGATAAACAAGAAACGATT 57.495 32.000 0.00 0.00 32.66 3.34
174 175 7.504924 TTTGTGAGGATAAACAAGAAACGAT 57.495 32.000 0.00 0.00 37.57 3.73
175 176 6.928979 TTTGTGAGGATAAACAAGAAACGA 57.071 33.333 0.00 0.00 37.57 3.85
176 177 9.277565 CATATTTGTGAGGATAAACAAGAAACG 57.722 33.333 0.00 0.00 37.57 3.60
207 208 3.596214 ACGTGTGTCAGGCCTAATTTAG 58.404 45.455 3.98 0.00 0.00 1.85
218 219 2.161808 AGAGAATCCGTACGTGTGTCAG 59.838 50.000 15.21 0.00 33.66 3.51
227 228 6.496338 AAATCCAAACAAGAGAATCCGTAC 57.504 37.500 0.00 0.00 33.66 3.67
228 229 8.801882 ATTAAATCCAAACAAGAGAATCCGTA 57.198 30.769 0.00 0.00 33.66 4.02
229 230 7.703058 ATTAAATCCAAACAAGAGAATCCGT 57.297 32.000 0.00 0.00 33.66 4.69
230 231 7.429340 CGAATTAAATCCAAACAAGAGAATCCG 59.571 37.037 0.00 0.00 33.66 4.18
231 232 8.244113 ACGAATTAAATCCAAACAAGAGAATCC 58.756 33.333 0.00 0.00 33.66 3.01
232 233 9.278734 GACGAATTAAATCCAAACAAGAGAATC 57.721 33.333 0.00 0.00 0.00 2.52
233 234 8.244113 GGACGAATTAAATCCAAACAAGAGAAT 58.756 33.333 0.00 0.00 32.35 2.40
234 235 7.572353 CGGACGAATTAAATCCAAACAAGAGAA 60.572 37.037 0.00 0.00 32.35 2.87
235 236 6.128391 CGGACGAATTAAATCCAAACAAGAGA 60.128 38.462 0.00 0.00 32.35 3.10
236 237 6.021596 CGGACGAATTAAATCCAAACAAGAG 58.978 40.000 0.00 0.00 32.35 2.85
237 238 5.470777 ACGGACGAATTAAATCCAAACAAGA 59.529 36.000 0.00 0.00 32.35 3.02
238 239 5.695818 ACGGACGAATTAAATCCAAACAAG 58.304 37.500 0.00 0.00 32.35 3.16
239 240 5.692613 ACGGACGAATTAAATCCAAACAA 57.307 34.783 0.00 0.00 32.35 2.83
240 241 5.008811 ACAACGGACGAATTAAATCCAAACA 59.991 36.000 0.00 0.00 32.35 2.83
241 242 5.454520 ACAACGGACGAATTAAATCCAAAC 58.545 37.500 0.00 0.00 32.35 2.93
242 243 5.238868 TGACAACGGACGAATTAAATCCAAA 59.761 36.000 0.00 0.00 32.35 3.28
243 244 4.755629 TGACAACGGACGAATTAAATCCAA 59.244 37.500 0.00 0.00 32.35 3.53
244 245 4.152759 GTGACAACGGACGAATTAAATCCA 59.847 41.667 0.00 0.00 32.35 3.41
250 251 2.816204 TGGTGACAACGGACGAATTA 57.184 45.000 0.00 0.00 37.44 1.40
267 268 4.432762 CGCAAACGCAAAAATACAGATTGG 60.433 41.667 0.00 0.00 0.00 3.16
274 275 3.600786 GGACTACGCAAACGCAAAAATAC 59.399 43.478 0.00 0.00 45.53 1.89
299 300 7.601886 ACGCTATGATAATCCAAGAAGATGAAG 59.398 37.037 0.00 0.00 0.00 3.02
302 303 6.870439 TGACGCTATGATAATCCAAGAAGATG 59.130 38.462 0.00 0.00 0.00 2.90
307 308 6.582636 ACTTTGACGCTATGATAATCCAAGA 58.417 36.000 0.00 0.00 0.00 3.02
313 314 9.601217 AGAACTAAACTTTGACGCTATGATAAT 57.399 29.630 0.00 0.00 0.00 1.28
316 317 7.063544 GTCAGAACTAAACTTTGACGCTATGAT 59.936 37.037 0.00 0.00 0.00 2.45
317 318 6.365247 GTCAGAACTAAACTTTGACGCTATGA 59.635 38.462 0.00 0.00 0.00 2.15
318 319 6.145534 TGTCAGAACTAAACTTTGACGCTATG 59.854 38.462 0.00 0.00 40.67 2.23
347 348 6.466885 AGTACATATTTGACGCTAGAACCT 57.533 37.500 0.00 0.00 0.00 3.50
349 350 7.914346 ACAGTAGTACATATTTGACGCTAGAAC 59.086 37.037 2.52 0.00 0.00 3.01
377 462 8.204903 AGATCAATCTAGTCTCATGCCTAATT 57.795 34.615 0.00 0.00 34.85 1.40
398 483 4.870991 AGAACTAAACTTTGGCGCTAGATC 59.129 41.667 7.64 3.56 0.00 2.75
399 484 4.631813 CAGAACTAAACTTTGGCGCTAGAT 59.368 41.667 7.64 0.00 0.00 1.98
400 485 3.994392 CAGAACTAAACTTTGGCGCTAGA 59.006 43.478 7.64 0.00 0.00 2.43
428 513 8.943085 ACCAGGAAGATCAAAGATGTCTATAAT 58.057 33.333 0.00 0.00 0.00 1.28
429 514 8.324191 ACCAGGAAGATCAAAGATGTCTATAA 57.676 34.615 0.00 0.00 0.00 0.98
432 517 7.733773 TTACCAGGAAGATCAAAGATGTCTA 57.266 36.000 0.00 0.00 0.00 2.59
433 518 6.627087 TTACCAGGAAGATCAAAGATGTCT 57.373 37.500 0.00 0.00 0.00 3.41
434 519 7.011857 GTGATTACCAGGAAGATCAAAGATGTC 59.988 40.741 0.00 0.00 31.01 3.06
435 520 6.825721 GTGATTACCAGGAAGATCAAAGATGT 59.174 38.462 0.00 0.00 31.01 3.06
436 521 6.825213 TGTGATTACCAGGAAGATCAAAGATG 59.175 38.462 0.00 0.00 31.01 2.90
437 522 6.962182 TGTGATTACCAGGAAGATCAAAGAT 58.038 36.000 0.00 0.00 31.01 2.40
439 524 6.094603 CCTTGTGATTACCAGGAAGATCAAAG 59.905 42.308 1.69 6.48 41.17 2.77
440 525 5.945784 CCTTGTGATTACCAGGAAGATCAAA 59.054 40.000 1.69 0.00 41.17 2.69
441 526 5.500234 CCTTGTGATTACCAGGAAGATCAA 58.500 41.667 1.69 0.00 41.17 2.57
442 527 4.626287 GCCTTGTGATTACCAGGAAGATCA 60.626 45.833 11.57 0.00 41.17 2.92
443 528 3.879892 GCCTTGTGATTACCAGGAAGATC 59.120 47.826 11.57 0.00 41.17 2.75
444 529 3.372025 GGCCTTGTGATTACCAGGAAGAT 60.372 47.826 11.57 0.00 41.17 2.40
445 530 2.026262 GGCCTTGTGATTACCAGGAAGA 60.026 50.000 11.57 0.00 41.17 2.87
446 531 2.290896 TGGCCTTGTGATTACCAGGAAG 60.291 50.000 11.57 0.00 41.17 3.46
447 532 1.707989 TGGCCTTGTGATTACCAGGAA 59.292 47.619 11.57 0.00 41.17 3.36
450 535 3.763360 TGAATTGGCCTTGTGATTACCAG 59.237 43.478 3.32 0.00 0.00 4.00
464 549 9.328721 GTTGCATTTTTATTAGTTTGAATTGGC 57.671 29.630 0.00 0.00 0.00 4.52
547 633 6.768029 TCTAGCATTTCAATTTGCAAACAC 57.232 33.333 15.41 0.00 41.35 3.32
613 705 4.200283 GTCGAGGAGAGCAGCGGG 62.200 72.222 0.00 0.00 0.00 6.13
648 740 2.169352 GCAGCTAATCTCTGTTCCCTCA 59.831 50.000 0.00 0.00 34.21 3.86
649 741 2.433970 AGCAGCTAATCTCTGTTCCCTC 59.566 50.000 0.00 0.00 34.21 4.30
685 777 6.538742 CAGTTCCTGTAAGTTGAGAGACAAAA 59.461 38.462 0.00 0.00 40.36 2.44
725 817 9.196552 GAGCAACTTAATAAGCATCAACTTTTT 57.803 29.630 0.00 0.00 0.00 1.94
757 849 8.573035 TCCATCACAGTTACAGGAATTAAAAAC 58.427 33.333 0.00 0.00 0.00 2.43
759 851 7.094975 CGTCCATCACAGTTACAGGAATTAAAA 60.095 37.037 0.00 0.00 0.00 1.52
761 853 5.872617 CGTCCATCACAGTTACAGGAATTAA 59.127 40.000 0.00 0.00 0.00 1.40
762 854 5.416083 CGTCCATCACAGTTACAGGAATTA 58.584 41.667 0.00 0.00 0.00 1.40
775 867 1.001974 CTTCAACTCCCGTCCATCACA 59.998 52.381 0.00 0.00 0.00 3.58
852 944 6.091718 TGTACACAGATACTACAACTTGCA 57.908 37.500 0.00 0.00 0.00 4.08
853 945 7.974501 ACTATGTACACAGATACTACAACTTGC 59.025 37.037 8.45 0.00 0.00 4.01
862 954 9.258826 CTACGTAGAACTATGTACACAGATACT 57.741 37.037 17.95 6.47 36.71 2.12
863 955 9.039870 ACTACGTAGAACTATGTACACAGATAC 57.960 37.037 28.74 6.95 36.71 2.24
864 956 9.605275 AACTACGTAGAACTATGTACACAGATA 57.395 33.333 28.74 0.00 36.71 1.98
865 957 8.503458 AACTACGTAGAACTATGTACACAGAT 57.497 34.615 28.74 0.00 36.71 2.90
866 958 7.912056 AACTACGTAGAACTATGTACACAGA 57.088 36.000 28.74 0.00 36.71 3.41
867 959 8.449397 AGAAACTACGTAGAACTATGTACACAG 58.551 37.037 28.74 0.00 36.71 3.66
946 1038 9.088512 CAATAAGTTGAGTTATCAGTAGTGACC 57.911 37.037 1.37 0.00 37.53 4.02
972 1064 5.708877 ACCTCTGTACTAGAAGTGACAAC 57.291 43.478 0.00 0.00 34.32 3.32
1003 1095 4.090066 CGAGACCGAAGTTAAATGTGTGAG 59.910 45.833 0.00 0.00 38.22 3.51
1020 1112 1.319541 TTCCGAGGATCATCGAGACC 58.680 55.000 29.63 0.00 45.56 3.85
1047 1141 3.813724 GGGGCTGGGACATCAGGG 61.814 72.222 0.00 0.00 38.20 4.45
1094 1200 0.031716 AGGATCTAGCACAGGCCTCA 60.032 55.000 0.00 0.00 42.56 3.86
1095 1201 1.892474 CTAGGATCTAGCACAGGCCTC 59.108 57.143 0.00 0.00 42.56 4.70
1232 1495 8.960591 CAAGTGAAACCATTTAGAGGAACATAT 58.039 33.333 0.00 0.00 37.80 1.78
1286 1549 0.773644 ATGAATATCAAGGGCGGGCT 59.226 50.000 0.26 0.00 0.00 5.19
1287 1550 1.168714 GATGAATATCAAGGGCGGGC 58.831 55.000 0.00 0.00 33.38 6.13
1307 1641 7.872163 TTACAAATGTCAAACTCATCAATGC 57.128 32.000 0.00 0.00 0.00 3.56
1365 1707 6.128254 GGAGTTAAAGAGCATTCCTACAACAC 60.128 42.308 0.00 0.00 0.00 3.32
1444 1786 3.253188 AGCAACGCATTGAATGTAGTTGT 59.747 39.130 29.65 21.03 44.61 3.32
1475 1817 0.468029 ACTTGTGGTTTGGAGGCTGG 60.468 55.000 0.00 0.00 0.00 4.85
1536 1878 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
1537 1879 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
1538 1880 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
1539 1881 3.367025 GTGACAAGTAATTCCGAACGGAG 59.633 47.826 15.34 5.60 46.06 4.63
1540 1882 3.243805 TGTGACAAGTAATTCCGAACGGA 60.244 43.478 12.04 12.04 43.52 4.69
1541 1883 3.061322 TGTGACAAGTAATTCCGAACGG 58.939 45.455 6.94 6.94 0.00 4.44
1542 1884 4.718858 TTGTGACAAGTAATTCCGAACG 57.281 40.909 0.00 0.00 0.00 3.95
1543 1885 7.096230 CCATTTTTGTGACAAGTAATTCCGAAC 60.096 37.037 0.00 0.00 0.00 3.95
1544 1886 6.920758 CCATTTTTGTGACAAGTAATTCCGAA 59.079 34.615 0.00 0.00 0.00 4.30
1545 1887 6.263392 TCCATTTTTGTGACAAGTAATTCCGA 59.737 34.615 0.00 0.00 0.00 4.55
1546 1888 6.442952 TCCATTTTTGTGACAAGTAATTCCG 58.557 36.000 0.00 0.00 0.00 4.30
1547 1889 7.872483 ACATCCATTTTTGTGACAAGTAATTCC 59.128 33.333 0.00 0.00 0.00 3.01
1548 1890 8.816640 ACATCCATTTTTGTGACAAGTAATTC 57.183 30.769 0.00 0.00 0.00 2.17
1551 1893 9.295825 AGATACATCCATTTTTGTGACAAGTAA 57.704 29.630 0.00 0.00 0.00 2.24
1552 1894 8.862325 AGATACATCCATTTTTGTGACAAGTA 57.138 30.769 0.00 0.00 0.00 2.24
1553 1895 7.765695 AGATACATCCATTTTTGTGACAAGT 57.234 32.000 0.00 0.00 0.00 3.16
1554 1896 8.729756 TGTAGATACATCCATTTTTGTGACAAG 58.270 33.333 0.00 0.00 0.00 3.16
1555 1897 8.628630 TGTAGATACATCCATTTTTGTGACAA 57.371 30.769 0.00 0.00 0.00 3.18
1556 1898 8.511321 GTTGTAGATACATCCATTTTTGTGACA 58.489 33.333 0.00 0.00 35.89 3.58
1557 1899 8.730680 AGTTGTAGATACATCCATTTTTGTGAC 58.269 33.333 0.00 0.00 35.89 3.67
1558 1900 8.862325 AGTTGTAGATACATCCATTTTTGTGA 57.138 30.769 0.00 0.00 35.89 3.58
1589 1931 9.469807 GTTCGAGAAATGAATGTATCTAGATGT 57.530 33.333 15.79 0.00 0.00 3.06
1590 1932 8.634265 CGTTCGAGAAATGAATGTATCTAGATG 58.366 37.037 15.79 0.00 0.00 2.90
1591 1933 8.568794 TCGTTCGAGAAATGAATGTATCTAGAT 58.431 33.333 10.73 10.73 34.65 1.98
1592 1934 7.927048 TCGTTCGAGAAATGAATGTATCTAGA 58.073 34.615 0.00 0.00 34.65 2.43
1593 1935 7.858382 ACTCGTTCGAGAAATGAATGTATCTAG 59.142 37.037 25.45 0.00 36.24 2.43
1594 1936 7.704271 ACTCGTTCGAGAAATGAATGTATCTA 58.296 34.615 25.45 0.00 36.24 1.98
1595 1937 6.565234 ACTCGTTCGAGAAATGAATGTATCT 58.435 36.000 25.45 0.00 36.24 1.98
1596 1938 6.814076 ACTCGTTCGAGAAATGAATGTATC 57.186 37.500 25.45 0.00 36.24 2.24
1597 1939 8.873215 ATTACTCGTTCGAGAAATGAATGTAT 57.127 30.769 25.45 4.44 36.24 2.29
1598 1940 8.697846 AATTACTCGTTCGAGAAATGAATGTA 57.302 30.769 25.45 5.40 36.24 2.29
1599 1941 7.201530 GGAATTACTCGTTCGAGAAATGAATGT 60.202 37.037 25.45 6.27 36.24 2.71
1600 1942 7.119997 GGAATTACTCGTTCGAGAAATGAATG 58.880 38.462 25.45 0.71 36.24 2.67
1601 1943 6.019801 CGGAATTACTCGTTCGAGAAATGAAT 60.020 38.462 25.45 13.87 36.24 2.57
1602 1944 5.287752 CGGAATTACTCGTTCGAGAAATGAA 59.712 40.000 25.45 12.56 36.24 2.57
1603 1945 4.796830 CGGAATTACTCGTTCGAGAAATGA 59.203 41.667 25.45 8.95 36.24 2.57
1604 1946 4.796830 TCGGAATTACTCGTTCGAGAAATG 59.203 41.667 25.45 10.32 36.24 2.32
1605 1947 4.990257 TCGGAATTACTCGTTCGAGAAAT 58.010 39.130 25.45 10.64 36.24 2.17
1606 1948 4.424061 TCGGAATTACTCGTTCGAGAAA 57.576 40.909 25.45 12.16 36.24 2.52
1607 1949 4.161333 GTTCGGAATTACTCGTTCGAGAA 58.839 43.478 25.45 15.99 36.24 2.87
1608 1950 3.725895 CGTTCGGAATTACTCGTTCGAGA 60.726 47.826 25.45 7.53 36.24 4.04
1609 1951 2.525096 CGTTCGGAATTACTCGTTCGAG 59.475 50.000 18.66 18.66 38.17 4.04
1610 1952 2.508867 CGTTCGGAATTACTCGTTCGA 58.491 47.619 0.00 0.00 0.00 3.71
1611 1953 1.580704 CCGTTCGGAATTACTCGTTCG 59.419 52.381 5.19 0.00 0.00 3.95
1612 1954 2.850647 CTCCGTTCGGAATTACTCGTTC 59.149 50.000 14.79 0.00 33.41 3.95
1613 1955 2.416431 CCTCCGTTCGGAATTACTCGTT 60.416 50.000 14.79 0.00 33.41 3.85
1614 1956 1.133790 CCTCCGTTCGGAATTACTCGT 59.866 52.381 14.79 0.00 33.41 4.18
1615 1957 1.535437 CCCTCCGTTCGGAATTACTCG 60.535 57.143 14.79 1.97 33.41 4.18
1616 1958 1.753073 TCCCTCCGTTCGGAATTACTC 59.247 52.381 14.79 0.00 33.41 2.59
1617 1959 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
1618 1960 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
1619 1961 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
1620 1962 1.479730 GTACTCCCTCCGTTCGGAATT 59.520 52.381 14.79 0.00 33.41 2.17
1621 1963 1.109609 GTACTCCCTCCGTTCGGAAT 58.890 55.000 14.79 2.09 33.41 3.01
1622 1964 0.967380 GGTACTCCCTCCGTTCGGAA 60.967 60.000 14.79 0.04 33.41 4.30
1623 1965 1.379044 GGTACTCCCTCCGTTCGGA 60.379 63.158 13.34 13.34 0.00 4.55
1624 1966 0.969409 AAGGTACTCCCTCCGTTCGG 60.969 60.000 4.74 4.74 45.47 4.30
1625 1967 0.172803 CAAGGTACTCCCTCCGTTCG 59.827 60.000 0.00 0.00 45.47 3.95
1626 1968 1.264295 ACAAGGTACTCCCTCCGTTC 58.736 55.000 0.00 0.00 45.47 3.95
1627 1969 2.042162 TCTACAAGGTACTCCCTCCGTT 59.958 50.000 0.00 0.00 45.47 4.44
1628 1970 1.637553 TCTACAAGGTACTCCCTCCGT 59.362 52.381 0.00 0.00 45.47 4.69
1629 1971 2.431954 TCTACAAGGTACTCCCTCCG 57.568 55.000 0.00 0.00 45.47 4.63
1630 1972 3.181464 GCATTCTACAAGGTACTCCCTCC 60.181 52.174 0.00 0.00 45.47 4.30
1631 1973 3.451178 TGCATTCTACAAGGTACTCCCTC 59.549 47.826 0.00 0.00 45.47 4.30
1633 1975 3.906720 TGCATTCTACAAGGTACTCCC 57.093 47.619 0.00 0.00 38.49 4.30
1634 1976 5.065218 CACAATGCATTCTACAAGGTACTCC 59.935 44.000 9.53 0.00 38.49 3.85
1635 1977 5.874810 TCACAATGCATTCTACAAGGTACTC 59.125 40.000 9.53 0.00 38.49 2.59
1637 1979 6.314784 GTTCACAATGCATTCTACAAGGTAC 58.685 40.000 9.53 0.00 0.00 3.34
1638 1980 5.414454 GGTTCACAATGCATTCTACAAGGTA 59.586 40.000 9.53 0.00 0.00 3.08
1639 1981 4.218417 GGTTCACAATGCATTCTACAAGGT 59.782 41.667 9.53 0.00 0.00 3.50
1640 1982 4.380867 GGGTTCACAATGCATTCTACAAGG 60.381 45.833 9.53 0.00 0.00 3.61
1773 2115 4.833390 ACCCTGAAGAAAATTAGTCCTCG 58.167 43.478 0.00 0.00 0.00 4.63
1839 2472 4.697514 ACATCAACGGAGGTGATATTCAG 58.302 43.478 0.00 0.00 36.55 3.02
1968 2611 5.927115 TCACGCTTGTGTTTGTGTATATGTA 59.073 36.000 0.00 0.00 44.22 2.29
1970 2613 5.276240 TCACGCTTGTGTTTGTGTATATG 57.724 39.130 0.00 0.00 44.22 1.78
1972 2615 4.991687 TCATCACGCTTGTGTTTGTGTATA 59.008 37.500 0.00 0.00 44.22 1.47
1974 2617 3.198872 TCATCACGCTTGTGTTTGTGTA 58.801 40.909 0.00 0.00 44.22 2.90
1976 2619 2.753989 TCATCACGCTTGTGTTTGTG 57.246 45.000 0.00 0.00 44.22 3.33
1977 2620 4.274705 TGTTATCATCACGCTTGTGTTTGT 59.725 37.500 0.00 0.00 44.22 2.83
1978 2621 4.782156 TGTTATCATCACGCTTGTGTTTG 58.218 39.130 0.00 0.00 44.22 2.93
1997 2640 6.360329 CGACGCTTAACTTTAACTTGATGTT 58.640 36.000 0.00 0.00 42.31 2.71
2001 2644 4.370917 ACCGACGCTTAACTTTAACTTGA 58.629 39.130 0.00 0.00 0.00 3.02
2030 2673 2.301296 CAGAGGGAGAAGATGTGTGTGT 59.699 50.000 0.00 0.00 0.00 3.72
2056 2699 4.710324 CTTGTTAGGGTTTGTCAGGTGTA 58.290 43.478 0.00 0.00 0.00 2.90
2061 2706 2.218603 ACGCTTGTTAGGGTTTGTCAG 58.781 47.619 0.00 0.00 44.32 3.51
2117 2762 0.625683 ATGCTTCCCCAGGATCCACT 60.626 55.000 15.82 0.00 0.00 4.00
2126 2771 3.727258 CCCGGTCATGCTTCCCCA 61.727 66.667 0.00 0.00 0.00 4.96
2127 2772 3.406595 CTCCCGGTCATGCTTCCCC 62.407 68.421 0.00 0.00 0.00 4.81
2150 2828 2.548067 CCCAACGAGCAAGACAACTACT 60.548 50.000 0.00 0.00 0.00 2.57
2161 2839 4.659172 CCTTGGCCCCAACGAGCA 62.659 66.667 0.00 0.00 0.00 4.26
2165 2843 4.740822 CCCTCCTTGGCCCCAACG 62.741 72.222 0.00 0.00 0.00 4.10
2185 2863 1.831580 AGATTGAGAAGTTGGGCTGC 58.168 50.000 0.00 0.00 0.00 5.25
2188 2866 1.203287 GGCAAGATTGAGAAGTTGGGC 59.797 52.381 0.00 0.00 0.00 5.36
2194 2872 1.089920 CGGGTGGCAAGATTGAGAAG 58.910 55.000 0.00 0.00 0.00 2.85
2234 2912 1.422388 CATATCTCCACGCCGATGTG 58.578 55.000 0.00 0.58 39.60 3.21
2257 2935 2.012673 CCGTGTTCTAGCTAGTACCGT 58.987 52.381 23.09 0.00 0.00 4.83
2267 2945 2.267961 GGGGTGCCCGTGTTCTAG 59.732 66.667 0.54 0.00 36.85 2.43
2290 2968 4.404098 GGTCCACGTCGCCCCATT 62.404 66.667 0.00 0.00 0.00 3.16
2298 2976 1.728426 CGTTCGACAGGTCCACGTC 60.728 63.158 9.50 0.00 31.71 4.34
2308 2986 3.109592 AAAGGCCACCCGTTCGACA 62.110 57.895 5.01 0.00 35.76 4.35
2310 2988 2.281208 CAAAGGCCACCCGTTCGA 60.281 61.111 5.01 0.00 35.76 3.71
2311 2989 3.361977 CCAAAGGCCACCCGTTCG 61.362 66.667 5.01 0.00 35.76 3.95
2313 2991 3.503839 TCCCAAAGGCCACCCGTT 61.504 61.111 5.01 0.00 35.76 4.44
2314 2992 3.966543 CTCCCAAAGGCCACCCGT 61.967 66.667 5.01 0.00 35.76 5.28
2315 2993 2.893682 GATCTCCCAAAGGCCACCCG 62.894 65.000 5.01 0.00 35.76 5.28
2316 2994 1.076705 GATCTCCCAAAGGCCACCC 60.077 63.158 5.01 0.00 0.00 4.61
2317 2995 0.039618 TTGATCTCCCAAAGGCCACC 59.960 55.000 5.01 0.00 0.00 4.61
2318 2996 1.177401 GTTGATCTCCCAAAGGCCAC 58.823 55.000 5.01 0.00 0.00 5.01
2319 2997 0.322456 CGTTGATCTCCCAAAGGCCA 60.322 55.000 5.01 0.00 0.00 5.36
2320 2998 0.322546 ACGTTGATCTCCCAAAGGCC 60.323 55.000 0.00 0.00 31.37 5.19
2374 3086 3.641436 TCATCCGACCATAGTGCATAAGT 59.359 43.478 0.00 0.00 0.00 2.24
2376 3088 3.990092 GTCATCCGACCATAGTGCATAA 58.010 45.455 0.00 0.00 36.02 1.90
2406 3118 2.346766 TGCATGTCGGCTCCATAATT 57.653 45.000 0.00 0.00 34.04 1.40
2414 3126 1.746615 GGTGTGATGCATGTCGGCT 60.747 57.895 2.46 0.00 34.04 5.52
2417 3129 3.132925 TGATATGGTGTGATGCATGTCG 58.867 45.455 2.46 0.00 0.00 4.35
2531 3249 8.091449 AGAAACAGAACTATAACTCTGAGTTGG 58.909 37.037 28.46 20.30 41.38 3.77
2544 3262 8.924511 TTCAAAAGGATGAGAAACAGAACTAT 57.075 30.769 0.00 0.00 0.00 2.12
2548 3266 6.925165 GCAATTCAAAAGGATGAGAAACAGAA 59.075 34.615 0.00 0.00 0.00 3.02
2574 3312 5.458362 CCAGAGAGAGAGGGGCTAATAACTA 60.458 48.000 0.00 0.00 0.00 2.24
2575 3313 4.479158 CAGAGAGAGAGGGGCTAATAACT 58.521 47.826 0.00 0.00 0.00 2.24
2581 3319 1.063567 GTTCCAGAGAGAGAGGGGCTA 60.064 57.143 0.00 0.00 0.00 3.93
2586 3324 2.163412 CACTTCGTTCCAGAGAGAGAGG 59.837 54.545 0.00 0.00 0.00 3.69
2595 3333 0.588252 CAACCTGCACTTCGTTCCAG 59.412 55.000 0.00 0.00 0.00 3.86
2596 3334 0.179234 TCAACCTGCACTTCGTTCCA 59.821 50.000 0.00 0.00 0.00 3.53
2601 3339 0.445436 GCTCATCAACCTGCACTTCG 59.555 55.000 0.00 0.00 0.00 3.79
2619 3357 1.467734 CTCTCTGTCCAATGTTGCAGC 59.532 52.381 0.00 0.00 0.00 5.25
2636 3374 2.812218 TAGAGCTGCTGCACCCCTCT 62.812 60.000 18.42 19.87 42.74 3.69
2642 3380 0.742635 GGGTTCTAGAGCTGCTGCAC 60.743 60.000 18.42 11.70 42.74 4.57
2654 3392 1.073548 GTTGTTGGCCCGGGTTCTA 59.926 57.895 24.63 9.21 0.00 2.10
2655 3393 2.203437 GTTGTTGGCCCGGGTTCT 60.203 61.111 24.63 0.00 0.00 3.01
2656 3394 2.519780 TGTTGTTGGCCCGGGTTC 60.520 61.111 24.63 15.66 0.00 3.62
2657 3395 2.520741 CTGTTGTTGGCCCGGGTT 60.521 61.111 24.63 0.00 0.00 4.11
2735 3476 1.689233 CCCTTGGGTCCCTCGATCA 60.689 63.158 10.00 0.00 0.00 2.92
2736 3477 0.981277 TTCCCTTGGGTCCCTCGATC 60.981 60.000 10.00 0.00 0.00 3.69
2738 3479 1.612442 CTTCCCTTGGGTCCCTCGA 60.612 63.158 10.00 0.00 0.00 4.04
2741 3482 1.229984 CTCCTTCCCTTGGGTCCCT 60.230 63.158 10.00 0.00 0.00 4.20
2745 3486 2.203938 TCGCTCCTTCCCTTGGGT 60.204 61.111 5.51 0.00 0.00 4.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.