Multiple sequence alignment - TraesCS1D01G409600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G409600 chr1D 100.000 5404 0 0 1 5404 471443008 471437605 0.000000e+00 9980.0
1 TraesCS1D01G409600 chr1D 99.103 2117 16 2 1894 4009 9328558 9330672 0.000000e+00 3801.0
2 TraesCS1D01G409600 chr1D 92.381 315 23 1 4010 4324 251025797 251025484 1.070000e-121 448.0
3 TraesCS1D01G409600 chr1D 91.772 316 24 2 4010 4324 183797005 183796691 6.430000e-119 438.0
4 TraesCS1D01G409600 chr2D 98.138 3438 34 8 600 4009 636124441 636121006 0.000000e+00 5967.0
5 TraesCS1D01G409600 chr2D 98.411 3336 40 6 688 4011 18982834 18986168 0.000000e+00 5854.0
6 TraesCS1D01G409600 chr2D 98.407 3328 40 6 696 4011 18878877 18882203 0.000000e+00 5840.0
7 TraesCS1D01G409600 chr2D 98.659 1491 15 3 640 2125 644491308 644489818 0.000000e+00 2638.0
8 TraesCS1D01G409600 chr2D 97.834 277 3 2 3736 4009 644489783 644489507 4.900000e-130 475.0
9 TraesCS1D01G409600 chr2D 100.000 51 0 0 600 650 18878454 18878504 1.600000e-15 95.3
10 TraesCS1D01G409600 chr2D 98.039 51 1 0 600 650 18982208 18982258 7.460000e-14 89.8
11 TraesCS1D01G409600 chr2D 98.039 51 1 0 600 650 644491364 644491314 7.460000e-14 89.8
12 TraesCS1D01G409600 chr5D 98.518 3374 42 4 641 4010 34152225 34148856 0.000000e+00 5947.0
13 TraesCS1D01G409600 chr5D 90.101 596 55 3 1 596 365451041 365451632 0.000000e+00 771.0
14 TraesCS1D01G409600 chr5D 100.000 51 0 0 600 650 34152283 34152233 1.600000e-15 95.3
15 TraesCS1D01G409600 chr3D 98.740 3333 35 3 681 4009 57388887 57392216 0.000000e+00 5915.0
16 TraesCS1D01G409600 chr3D 89.983 599 59 1 1 599 398641441 398642038 0.000000e+00 773.0
17 TraesCS1D01G409600 chr3D 89.833 600 58 3 1 599 422099612 422100209 0.000000e+00 767.0
18 TraesCS1D01G409600 chr3D 85.567 97 12 2 5308 5404 177015918 177016012 3.440000e-17 100.0
19 TraesCS1D01G409600 chr3D 100.000 35 0 0 641 675 57388825 57388859 1.260000e-06 65.8
20 TraesCS1D01G409600 chr6D 98.959 2978 24 4 1039 4009 426848826 426851803 0.000000e+00 5321.0
21 TraesCS1D01G409600 chr6D 86.057 2582 329 18 1292 3852 465188366 465190937 0.000000e+00 2745.0
22 TraesCS1D01G409600 chr6D 89.983 599 59 1 1 599 111483420 111482823 0.000000e+00 773.0
23 TraesCS1D01G409600 chr6D 92.013 313 22 3 4013 4324 295580847 295580537 2.310000e-118 436.0
24 TraesCS1D01G409600 chr6D 90.517 116 3 2 665 780 426848464 426848571 4.360000e-31 147.0
25 TraesCS1D01G409600 chr6D 97.101 69 2 0 746 814 426848591 426848659 3.420000e-22 117.0
26 TraesCS1D01G409600 chr6D 100.000 52 0 0 599 650 426848367 426848418 4.460000e-16 97.1
27 TraesCS1D01G409600 chr6D 100.000 35 0 0 641 675 426848426 426848460 1.260000e-06 65.8
28 TraesCS1D01G409600 chr5A 85.714 2674 326 36 1171 3823 608441244 608438606 0.000000e+00 2771.0
29 TraesCS1D01G409600 chr7D 98.663 823 11 0 665 1487 573964956 573965778 0.000000e+00 1459.0
30 TraesCS1D01G409600 chr7D 87.836 1192 134 6 2664 3852 180787669 180788852 0.000000e+00 1387.0
31 TraesCS1D01G409600 chr7D 90.134 598 56 3 1 598 312586578 312587172 0.000000e+00 774.0
32 TraesCS1D01G409600 chr7D 92.063 315 25 0 4010 4324 373886409 373886723 1.380000e-120 444.0
33 TraesCS1D01G409600 chr7D 91.746 315 26 0 4010 4324 198611542 198611228 6.430000e-119 438.0
34 TraesCS1D01G409600 chr7D 100.000 51 0 0 600 650 573964841 573964891 1.600000e-15 95.3
35 TraesCS1D01G409600 chr7D 100.000 30 0 0 646 675 573964903 573964932 7.560000e-04 56.5
36 TraesCS1D01G409600 chr1B 87.306 1095 97 17 4325 5402 655287776 655286707 0.000000e+00 1214.0
37 TraesCS1D01G409600 chr1B 90.301 598 56 2 1 598 271246020 271246615 0.000000e+00 782.0
38 TraesCS1D01G409600 chr1B 90.033 602 53 3 1 599 443320571 443319974 0.000000e+00 773.0
39 TraesCS1D01G409600 chr1B 82.184 696 86 19 4376 5048 655066642 655067322 1.020000e-156 564.0
40 TraesCS1D01G409600 chr1B 92.163 319 24 1 4007 4324 363183483 363183801 2.970000e-122 449.0
41 TraesCS1D01G409600 chr1B 93.103 58 4 0 5347 5404 655286730 655286673 9.640000e-13 86.1
42 TraesCS1D01G409600 chr5B 90.516 601 54 3 1 599 216769654 216769055 0.000000e+00 791.0
43 TraesCS1D01G409600 chr5B 80.473 169 27 4 5239 5404 333254832 333254997 2.040000e-24 124.0
44 TraesCS1D01G409600 chr7B 89.983 599 59 1 1 599 46039219 46038622 0.000000e+00 773.0
45 TraesCS1D01G409600 chr4D 92.381 315 24 0 4010 4324 223673535 223673221 2.970000e-122 449.0
46 TraesCS1D01G409600 chr4D 92.381 315 24 0 4010 4324 248893137 248892823 2.970000e-122 449.0
47 TraesCS1D01G409600 chr3B 92.405 316 21 3 4010 4324 524209013 524208700 1.070000e-121 448.0
48 TraesCS1D01G409600 chr3B 83.041 171 23 6 5235 5401 255983259 255983427 3.370000e-32 150.0
49 TraesCS1D01G409600 chr3B 81.034 174 31 2 5232 5404 670203868 670204040 2.630000e-28 137.0
50 TraesCS1D01G409600 chr6B 80.347 173 27 6 5237 5404 35632646 35632476 2.040000e-24 124.0
51 TraesCS1D01G409600 chr1A 80.503 159 25 6 5249 5404 519816917 519816762 3.420000e-22 117.0
52 TraesCS1D01G409600 chr2B 90.667 75 7 0 5329 5403 173570621 173570695 3.440000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G409600 chr1D 471437605 471443008 5403 True 9980.000000 9980 100.000000 1 5404 1 chr1D.!!$R3 5403
1 TraesCS1D01G409600 chr1D 9328558 9330672 2114 False 3801.000000 3801 99.103000 1894 4009 1 chr1D.!!$F1 2115
2 TraesCS1D01G409600 chr2D 636121006 636124441 3435 True 5967.000000 5967 98.138000 600 4009 1 chr2D.!!$R1 3409
3 TraesCS1D01G409600 chr2D 18982208 18986168 3960 False 2971.900000 5854 98.225000 600 4011 2 chr2D.!!$F2 3411
4 TraesCS1D01G409600 chr2D 18878454 18882203 3749 False 2967.650000 5840 99.203500 600 4011 2 chr2D.!!$F1 3411
5 TraesCS1D01G409600 chr2D 644489507 644491364 1857 True 1067.600000 2638 98.177333 600 4009 3 chr2D.!!$R2 3409
6 TraesCS1D01G409600 chr5D 34148856 34152283 3427 True 3021.150000 5947 99.259000 600 4010 2 chr5D.!!$R1 3410
7 TraesCS1D01G409600 chr5D 365451041 365451632 591 False 771.000000 771 90.101000 1 596 1 chr5D.!!$F1 595
8 TraesCS1D01G409600 chr3D 57388825 57392216 3391 False 2990.400000 5915 99.370000 641 4009 2 chr3D.!!$F4 3368
9 TraesCS1D01G409600 chr3D 398641441 398642038 597 False 773.000000 773 89.983000 1 599 1 chr3D.!!$F2 598
10 TraesCS1D01G409600 chr3D 422099612 422100209 597 False 767.000000 767 89.833000 1 599 1 chr3D.!!$F3 598
11 TraesCS1D01G409600 chr6D 465188366 465190937 2571 False 2745.000000 2745 86.057000 1292 3852 1 chr6D.!!$F1 2560
12 TraesCS1D01G409600 chr6D 426848367 426851803 3436 False 1149.580000 5321 97.315400 599 4009 5 chr6D.!!$F2 3410
13 TraesCS1D01G409600 chr6D 111482823 111483420 597 True 773.000000 773 89.983000 1 599 1 chr6D.!!$R1 598
14 TraesCS1D01G409600 chr5A 608438606 608441244 2638 True 2771.000000 2771 85.714000 1171 3823 1 chr5A.!!$R1 2652
15 TraesCS1D01G409600 chr7D 180787669 180788852 1183 False 1387.000000 1387 87.836000 2664 3852 1 chr7D.!!$F1 1188
16 TraesCS1D01G409600 chr7D 312586578 312587172 594 False 774.000000 774 90.134000 1 598 1 chr7D.!!$F2 597
17 TraesCS1D01G409600 chr7D 573964841 573965778 937 False 536.933333 1459 99.554333 600 1487 3 chr7D.!!$F4 887
18 TraesCS1D01G409600 chr1B 271246020 271246615 595 False 782.000000 782 90.301000 1 598 1 chr1B.!!$F1 597
19 TraesCS1D01G409600 chr1B 443319974 443320571 597 True 773.000000 773 90.033000 1 599 1 chr1B.!!$R1 598
20 TraesCS1D01G409600 chr1B 655286673 655287776 1103 True 650.050000 1214 90.204500 4325 5404 2 chr1B.!!$R2 1079
21 TraesCS1D01G409600 chr1B 655066642 655067322 680 False 564.000000 564 82.184000 4376 5048 1 chr1B.!!$F3 672
22 TraesCS1D01G409600 chr5B 216769055 216769654 599 True 791.000000 791 90.516000 1 599 1 chr5B.!!$R1 598
23 TraesCS1D01G409600 chr7B 46038622 46039219 597 True 773.000000 773 89.983000 1 599 1 chr7B.!!$R1 598

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
439 440 0.390124 CTGTTGTTGGCATGCCTGTT 59.610 50.000 35.53 0.00 36.94 3.16 F
910 1497 1.040646 CCTCCGAATCTCCGATCCAA 58.959 55.000 0.00 0.00 0.00 3.53 F
1981 2640 2.765699 AGGTTGCAAAGGAAAAAGAGCA 59.234 40.909 0.00 0.00 0.00 4.26 F
2198 2864 6.182627 TCATCATTATCTTGGCCATGGTATC 58.817 40.000 17.95 4.29 0.00 2.24 F
4017 4691 0.188587 ATCCGGCCCTGATAGAGACA 59.811 55.000 0.00 0.00 0.00 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1981 2640 3.118112 CCTGAGCAATACCTGTCTCCAAT 60.118 47.826 0.0 0.0 31.15 3.16 R
2537 3206 5.402398 GGATTAACTTCAAGCAAGCGATTT 58.598 37.500 0.0 0.0 35.17 2.17 R
3094 3763 1.032014 GCCCATATCCAACGCAATGT 58.968 50.000 0.0 0.0 0.00 2.71 R
4185 4859 1.065709 ACCAAAGTTGACACTGACCGT 60.066 47.619 0.0 0.0 31.60 4.83 R
5249 5968 0.248289 GATCGGTCGGTTGAAGGGAA 59.752 55.000 0.0 0.0 0.00 3.97 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
55 56 7.768120 AGATAGTAGCCTCTTTTTGTGAATCAG 59.232 37.037 0.00 0.00 0.00 2.90
59 60 6.225981 AGCCTCTTTTTGTGAATCAGTTTT 57.774 33.333 0.00 0.00 0.00 2.43
61 62 6.536224 AGCCTCTTTTTGTGAATCAGTTTTTG 59.464 34.615 0.00 0.00 0.00 2.44
116 117 8.967918 GTTTAAATATCATCCCCCTATTAAGGC 58.032 37.037 0.00 0.00 42.14 4.35
142 143 8.508875 CAGAAATTAAAGAACCGGTTTTAGCTA 58.491 33.333 23.22 5.77 0.00 3.32
147 148 4.761235 AGAACCGGTTTTAGCTAAAAGC 57.239 40.909 35.20 35.20 45.26 3.51
202 203 9.556030 GTTGTTCCTACTGCTTATATTGAAAAC 57.444 33.333 0.00 0.00 0.00 2.43
238 239 7.556275 CCTGTTAGGATAAAGGAACATGCTAAA 59.444 37.037 0.00 0.00 37.67 1.85
239 240 8.871629 TGTTAGGATAAAGGAACATGCTAAAA 57.128 30.769 0.00 0.00 36.99 1.52
241 242 9.736023 GTTAGGATAAAGGAACATGCTAAAATG 57.264 33.333 0.00 0.00 36.99 2.32
257 258 0.586319 AATGTCAACAGTGGTTCGCG 59.414 50.000 0.00 0.00 34.21 5.87
260 261 0.865769 GTCAACAGTGGTTCGCGAAT 59.134 50.000 26.23 5.73 34.21 3.34
307 308 8.792633 CCATCTGAACAAATTAAAGTAGAACCA 58.207 33.333 0.00 0.00 0.00 3.67
335 336 9.436957 GTGTTTCTATGGTTAAAGATCTCTTGA 57.563 33.333 0.00 0.00 36.12 3.02
362 363 9.956640 TTGAAAATATTGAAGGGCATGTTATTT 57.043 25.926 0.00 0.00 0.00 1.40
391 392 2.947652 TGATGAAGCAGCTAGAATTGCC 59.052 45.455 0.00 0.00 41.17 4.52
397 398 1.545582 GCAGCTAGAATTGCCAAACCA 59.454 47.619 0.00 0.00 34.28 3.67
402 403 3.445096 GCTAGAATTGCCAAACCAGACAT 59.555 43.478 0.00 0.00 0.00 3.06
439 440 0.390124 CTGTTGTTGGCATGCCTGTT 59.610 50.000 35.53 0.00 36.94 3.16
454 455 7.013274 GGCATGCCTGTTATCTCAGTTAAAATA 59.987 37.037 29.98 0.00 34.02 1.40
486 487 8.916062 TCATTGCTATCATGGTTTATGTGATTT 58.084 29.630 0.00 0.00 38.01 2.17
502 503 2.371841 TGATTTGGGTGCTAGTGTGAGT 59.628 45.455 0.00 0.00 0.00 3.41
504 505 1.128200 TTGGGTGCTAGTGTGAGTGT 58.872 50.000 0.00 0.00 0.00 3.55
506 507 1.202639 TGGGTGCTAGTGTGAGTGTTG 60.203 52.381 0.00 0.00 0.00 3.33
567 568 6.552445 AGCACCTACTGAAATAGAAGACAT 57.448 37.500 0.00 0.00 0.00 3.06
568 569 6.951971 AGCACCTACTGAAATAGAAGACATT 58.048 36.000 0.00 0.00 0.00 2.71
569 570 6.820656 AGCACCTACTGAAATAGAAGACATTG 59.179 38.462 0.00 0.00 0.00 2.82
570 571 6.818644 GCACCTACTGAAATAGAAGACATTGA 59.181 38.462 0.00 0.00 0.00 2.57
571 572 7.497249 GCACCTACTGAAATAGAAGACATTGAT 59.503 37.037 0.00 0.00 0.00 2.57
572 573 8.824781 CACCTACTGAAATAGAAGACATTGATG 58.175 37.037 0.00 0.00 0.00 3.07
573 574 8.543774 ACCTACTGAAATAGAAGACATTGATGT 58.456 33.333 0.00 0.00 45.16 3.06
574 575 9.388506 CCTACTGAAATAGAAGACATTGATGTT 57.611 33.333 0.00 0.00 41.95 2.71
577 578 9.950496 ACTGAAATAGAAGACATTGATGTTACT 57.050 29.630 0.00 2.08 41.95 2.24
585 586 9.950496 AGAAGACATTGATGTTACTATCAAACT 57.050 29.630 11.83 9.67 46.63 2.66
588 589 9.319143 AGACATTGATGTTACTATCAAACTAGC 57.681 33.333 11.83 0.00 46.63 3.42
589 590 9.319143 GACATTGATGTTACTATCAAACTAGCT 57.681 33.333 11.83 0.00 46.63 3.32
910 1497 1.040646 CCTCCGAATCTCCGATCCAA 58.959 55.000 0.00 0.00 0.00 3.53
1263 1859 8.435931 AAAGGGGCTCTAAAAATGTATTTTCT 57.564 30.769 3.30 0.00 38.92 2.52
1873 2532 4.757149 ACTCAAAGAACATGAGGTTAGTGC 59.243 41.667 0.00 0.00 46.81 4.40
1981 2640 2.765699 AGGTTGCAAAGGAAAAAGAGCA 59.234 40.909 0.00 0.00 0.00 4.26
2198 2864 6.182627 TCATCATTATCTTGGCCATGGTATC 58.817 40.000 17.95 4.29 0.00 2.24
3094 3763 8.514594 CAATTCTAGTATTGAAAGTGCCAAAGA 58.485 33.333 15.01 0.00 37.65 2.52
3510 4180 7.012327 CACTTGAGATTCTTCAGTTTGTTACCA 59.988 37.037 0.00 0.00 0.00 3.25
4011 4685 3.967326 CCAATATAGATCCGGCCCTGATA 59.033 47.826 0.00 0.00 0.00 2.15
4012 4686 4.039730 CCAATATAGATCCGGCCCTGATAG 59.960 50.000 0.00 0.00 0.00 2.08
4013 4687 4.816048 ATATAGATCCGGCCCTGATAGA 57.184 45.455 0.00 0.00 0.00 1.98
4014 4688 2.516227 TAGATCCGGCCCTGATAGAG 57.484 55.000 0.00 0.00 0.00 2.43
4015 4689 0.780637 AGATCCGGCCCTGATAGAGA 59.219 55.000 0.00 0.00 0.00 3.10
4016 4690 0.892063 GATCCGGCCCTGATAGAGAC 59.108 60.000 0.00 0.00 0.00 3.36
4017 4691 0.188587 ATCCGGCCCTGATAGAGACA 59.811 55.000 0.00 0.00 0.00 3.41
4018 4692 0.755698 TCCGGCCCTGATAGAGACAC 60.756 60.000 0.00 0.00 0.00 3.67
4019 4693 0.757188 CCGGCCCTGATAGAGACACT 60.757 60.000 0.00 0.00 0.00 3.55
4020 4694 1.478837 CCGGCCCTGATAGAGACACTA 60.479 57.143 0.00 0.00 35.42 2.74
4021 4695 2.520069 CGGCCCTGATAGAGACACTAT 58.480 52.381 0.00 0.00 43.60 2.12
4033 4707 5.745312 AGAGACACTATCACACCATTTGA 57.255 39.130 0.00 0.00 0.00 2.69
4034 4708 5.728471 AGAGACACTATCACACCATTTGAG 58.272 41.667 0.00 0.00 0.00 3.02
4035 4709 5.481824 AGAGACACTATCACACCATTTGAGA 59.518 40.000 0.00 0.00 0.00 3.27
4036 4710 6.155910 AGAGACACTATCACACCATTTGAGAT 59.844 38.462 0.00 0.00 38.83 2.75
4037 4711 6.715280 AGACACTATCACACCATTTGAGATT 58.285 36.000 0.00 0.00 36.90 2.40
4038 4712 6.596888 AGACACTATCACACCATTTGAGATTG 59.403 38.462 0.00 0.00 36.90 2.67
4039 4713 6.240894 ACACTATCACACCATTTGAGATTGT 58.759 36.000 0.00 0.00 40.18 2.71
4040 4714 6.716628 ACACTATCACACCATTTGAGATTGTT 59.283 34.615 0.00 0.00 38.52 2.83
4041 4715 7.882791 ACACTATCACACCATTTGAGATTGTTA 59.117 33.333 0.00 0.00 38.52 2.41
4042 4716 8.393366 CACTATCACACCATTTGAGATTGTTAG 58.607 37.037 0.00 0.00 38.52 2.34
4043 4717 8.321353 ACTATCACACCATTTGAGATTGTTAGA 58.679 33.333 0.00 0.00 37.78 2.10
4044 4718 7.621428 ATCACACCATTTGAGATTGTTAGAG 57.379 36.000 0.00 0.00 32.03 2.43
4045 4719 6.768483 TCACACCATTTGAGATTGTTAGAGA 58.232 36.000 0.00 0.00 0.00 3.10
4046 4720 7.397221 TCACACCATTTGAGATTGTTAGAGAT 58.603 34.615 0.00 0.00 0.00 2.75
4047 4721 7.335171 TCACACCATTTGAGATTGTTAGAGATG 59.665 37.037 0.00 0.00 0.00 2.90
4048 4722 7.120285 CACACCATTTGAGATTGTTAGAGATGT 59.880 37.037 0.00 0.00 0.00 3.06
4049 4723 7.667219 ACACCATTTGAGATTGTTAGAGATGTT 59.333 33.333 0.00 0.00 0.00 2.71
4050 4724 7.966753 CACCATTTGAGATTGTTAGAGATGTTG 59.033 37.037 0.00 0.00 0.00 3.33
4051 4725 7.884877 ACCATTTGAGATTGTTAGAGATGTTGA 59.115 33.333 0.00 0.00 0.00 3.18
4052 4726 8.733458 CCATTTGAGATTGTTAGAGATGTTGAA 58.267 33.333 0.00 0.00 0.00 2.69
4053 4727 9.770503 CATTTGAGATTGTTAGAGATGTTGAAG 57.229 33.333 0.00 0.00 0.00 3.02
4054 4728 8.908786 TTTGAGATTGTTAGAGATGTTGAAGT 57.091 30.769 0.00 0.00 0.00 3.01
4055 4729 8.539770 TTGAGATTGTTAGAGATGTTGAAGTC 57.460 34.615 0.00 0.00 0.00 3.01
4056 4730 7.901029 TGAGATTGTTAGAGATGTTGAAGTCT 58.099 34.615 0.00 0.00 0.00 3.24
4057 4731 8.370940 TGAGATTGTTAGAGATGTTGAAGTCTT 58.629 33.333 0.00 0.00 0.00 3.01
4058 4732 8.545229 AGATTGTTAGAGATGTTGAAGTCTTG 57.455 34.615 0.00 0.00 0.00 3.02
4059 4733 8.153550 AGATTGTTAGAGATGTTGAAGTCTTGT 58.846 33.333 0.00 0.00 0.00 3.16
4060 4734 7.482654 TTGTTAGAGATGTTGAAGTCTTGTG 57.517 36.000 0.00 0.00 0.00 3.33
4061 4735 6.582636 TGTTAGAGATGTTGAAGTCTTGTGT 58.417 36.000 0.00 0.00 0.00 3.72
4062 4736 6.479990 TGTTAGAGATGTTGAAGTCTTGTGTG 59.520 38.462 0.00 0.00 0.00 3.82
4063 4737 4.384056 AGAGATGTTGAAGTCTTGTGTGG 58.616 43.478 0.00 0.00 0.00 4.17
4064 4738 3.480470 AGATGTTGAAGTCTTGTGTGGG 58.520 45.455 0.00 0.00 0.00 4.61
4065 4739 3.136443 AGATGTTGAAGTCTTGTGTGGGA 59.864 43.478 0.00 0.00 0.00 4.37
4066 4740 3.358111 TGTTGAAGTCTTGTGTGGGAA 57.642 42.857 0.00 0.00 0.00 3.97
4067 4741 3.691575 TGTTGAAGTCTTGTGTGGGAAA 58.308 40.909 0.00 0.00 0.00 3.13
4068 4742 4.082845 TGTTGAAGTCTTGTGTGGGAAAA 58.917 39.130 0.00 0.00 0.00 2.29
4069 4743 4.709397 TGTTGAAGTCTTGTGTGGGAAAAT 59.291 37.500 0.00 0.00 0.00 1.82
4070 4744 5.888724 TGTTGAAGTCTTGTGTGGGAAAATA 59.111 36.000 0.00 0.00 0.00 1.40
4071 4745 6.378564 TGTTGAAGTCTTGTGTGGGAAAATAA 59.621 34.615 0.00 0.00 0.00 1.40
4072 4746 7.093727 TGTTGAAGTCTTGTGTGGGAAAATAAA 60.094 33.333 0.00 0.00 0.00 1.40
4073 4747 7.411486 TGAAGTCTTGTGTGGGAAAATAAAA 57.589 32.000 0.00 0.00 0.00 1.52
4074 4748 8.017418 TGAAGTCTTGTGTGGGAAAATAAAAT 57.983 30.769 0.00 0.00 0.00 1.82
4075 4749 9.137459 TGAAGTCTTGTGTGGGAAAATAAAATA 57.863 29.630 0.00 0.00 0.00 1.40
4076 4750 9.406828 GAAGTCTTGTGTGGGAAAATAAAATAC 57.593 33.333 0.00 0.00 0.00 1.89
4077 4751 7.590279 AGTCTTGTGTGGGAAAATAAAATACG 58.410 34.615 0.00 0.00 0.00 3.06
4078 4752 6.307077 GTCTTGTGTGGGAAAATAAAATACGC 59.693 38.462 0.00 0.00 0.00 4.42
4079 4753 5.968528 TGTGTGGGAAAATAAAATACGCT 57.031 34.783 0.00 0.00 0.00 5.07
4080 4754 7.390996 TCTTGTGTGGGAAAATAAAATACGCTA 59.609 33.333 0.00 0.00 0.00 4.26
4081 4755 6.844254 TGTGTGGGAAAATAAAATACGCTAC 58.156 36.000 0.00 0.00 0.00 3.58
4082 4756 6.655848 TGTGTGGGAAAATAAAATACGCTACT 59.344 34.615 0.00 0.00 0.00 2.57
4083 4757 6.964934 GTGTGGGAAAATAAAATACGCTACTG 59.035 38.462 0.00 0.00 0.00 2.74
4084 4758 6.879993 TGTGGGAAAATAAAATACGCTACTGA 59.120 34.615 0.00 0.00 0.00 3.41
4085 4759 7.554835 TGTGGGAAAATAAAATACGCTACTGAT 59.445 33.333 0.00 0.00 0.00 2.90
4086 4760 8.403236 GTGGGAAAATAAAATACGCTACTGATT 58.597 33.333 0.00 0.00 0.00 2.57
4087 4761 8.962679 TGGGAAAATAAAATACGCTACTGATTT 58.037 29.630 0.00 0.00 0.00 2.17
4088 4762 9.797556 GGGAAAATAAAATACGCTACTGATTTT 57.202 29.630 0.00 0.00 36.83 1.82
4096 4770 9.654663 AAAATACGCTACTGATTTTCTAGTTCT 57.345 29.630 0.00 0.00 28.93 3.01
4097 4771 9.654663 AAATACGCTACTGATTTTCTAGTTCTT 57.345 29.630 0.00 0.00 0.00 2.52
4098 4772 6.952935 ACGCTACTGATTTTCTAGTTCTTG 57.047 37.500 0.00 0.00 0.00 3.02
4099 4773 5.869888 ACGCTACTGATTTTCTAGTTCTTGG 59.130 40.000 0.00 0.00 0.00 3.61
4100 4774 5.869888 CGCTACTGATTTTCTAGTTCTTGGT 59.130 40.000 0.00 0.00 0.00 3.67
4101 4775 6.369065 CGCTACTGATTTTCTAGTTCTTGGTT 59.631 38.462 0.00 0.00 0.00 3.67
4102 4776 7.412020 CGCTACTGATTTTCTAGTTCTTGGTTC 60.412 40.741 0.00 0.00 0.00 3.62
4103 4777 7.604545 GCTACTGATTTTCTAGTTCTTGGTTCT 59.395 37.037 0.00 0.00 0.00 3.01
4104 4778 7.971183 ACTGATTTTCTAGTTCTTGGTTCTC 57.029 36.000 0.00 0.00 0.00 2.87
4105 4779 6.937465 ACTGATTTTCTAGTTCTTGGTTCTCC 59.063 38.462 0.00 0.00 0.00 3.71
4106 4780 6.837312 TGATTTTCTAGTTCTTGGTTCTCCA 58.163 36.000 0.00 0.00 42.66 3.86
4107 4781 6.710744 TGATTTTCTAGTTCTTGGTTCTCCAC 59.289 38.462 0.00 0.00 44.22 4.02
4108 4782 5.623956 TTTCTAGTTCTTGGTTCTCCACA 57.376 39.130 0.00 0.00 44.22 4.17
4109 4783 5.623956 TTCTAGTTCTTGGTTCTCCACAA 57.376 39.130 0.00 0.00 44.22 3.33
4110 4784 5.215252 TCTAGTTCTTGGTTCTCCACAAG 57.785 43.478 0.00 0.00 44.22 3.16
4115 4789 4.008074 TCTTGGTTCTCCACAAGATGAC 57.992 45.455 3.23 0.00 45.76 3.06
4116 4790 3.648067 TCTTGGTTCTCCACAAGATGACT 59.352 43.478 3.23 0.00 45.76 3.41
4117 4791 4.103153 TCTTGGTTCTCCACAAGATGACTT 59.897 41.667 3.23 0.00 45.76 3.01
4118 4792 4.437682 TGGTTCTCCACAAGATGACTTT 57.562 40.909 0.00 0.00 39.03 2.66
4119 4793 4.792068 TGGTTCTCCACAAGATGACTTTT 58.208 39.130 0.00 0.00 39.03 2.27
4120 4794 4.580167 TGGTTCTCCACAAGATGACTTTTG 59.420 41.667 0.00 0.00 39.03 2.44
4121 4795 4.580580 GGTTCTCCACAAGATGACTTTTGT 59.419 41.667 0.00 0.00 37.99 2.83
4122 4796 7.628286 TGGTTCTCCACAAGATGACTTTTGTC 61.628 42.308 0.00 0.00 43.20 3.18
4139 4813 9.403583 GACTTTTGTCCCATAATATTTGGTAGA 57.596 33.333 12.67 4.73 43.37 2.59
4140 4814 9.185680 ACTTTTGTCCCATAATATTTGGTAGAC 57.814 33.333 12.67 12.94 31.99 2.59
4141 4815 8.528044 TTTTGTCCCATAATATTTGGTAGACC 57.472 34.615 12.67 0.00 31.99 3.85
4142 4816 7.460214 TTGTCCCATAATATTTGGTAGACCT 57.540 36.000 12.67 0.00 36.82 3.85
4143 4817 7.460214 TGTCCCATAATATTTGGTAGACCTT 57.540 36.000 12.67 0.00 36.82 3.50
4144 4818 7.878495 TGTCCCATAATATTTGGTAGACCTTT 58.122 34.615 12.67 0.00 36.82 3.11
4145 4819 7.996644 TGTCCCATAATATTTGGTAGACCTTTC 59.003 37.037 12.67 0.00 36.82 2.62
4146 4820 8.218488 GTCCCATAATATTTGGTAGACCTTTCT 58.782 37.037 12.67 0.00 36.82 2.52
4147 4821 8.787818 TCCCATAATATTTGGTAGACCTTTCTT 58.212 33.333 12.67 0.00 36.82 2.52
4148 4822 8.850156 CCCATAATATTTGGTAGACCTTTCTTG 58.150 37.037 12.67 0.00 36.82 3.02
4149 4823 8.850156 CCATAATATTTGGTAGACCTTTCTTGG 58.150 37.037 0.00 0.00 36.82 3.61
4150 4824 9.627123 CATAATATTTGGTAGACCTTTCTTGGA 57.373 33.333 0.00 0.00 36.82 3.53
4151 4825 7.939784 AATATTTGGTAGACCTTTCTTGGAC 57.060 36.000 0.00 0.00 36.82 4.02
4152 4826 4.781775 TTTGGTAGACCTTTCTTGGACA 57.218 40.909 0.00 0.00 36.82 4.02
4153 4827 4.993705 TTGGTAGACCTTTCTTGGACAT 57.006 40.909 0.00 0.00 36.82 3.06
4154 4828 4.993705 TGGTAGACCTTTCTTGGACATT 57.006 40.909 0.00 0.00 36.82 2.71
4155 4829 4.651778 TGGTAGACCTTTCTTGGACATTG 58.348 43.478 0.00 0.00 36.82 2.82
4156 4830 4.104102 TGGTAGACCTTTCTTGGACATTGT 59.896 41.667 0.00 0.00 36.82 2.71
4157 4831 5.070685 GGTAGACCTTTCTTGGACATTGTT 58.929 41.667 0.00 0.00 32.75 2.83
4158 4832 6.183361 TGGTAGACCTTTCTTGGACATTGTTA 60.183 38.462 0.00 0.00 36.82 2.41
4159 4833 6.713450 GGTAGACCTTTCTTGGACATTGTTAA 59.287 38.462 0.00 0.00 32.75 2.01
4160 4834 7.393515 GGTAGACCTTTCTTGGACATTGTTAAT 59.606 37.037 0.00 0.00 32.75 1.40
4161 4835 7.219484 AGACCTTTCTTGGACATTGTTAATG 57.781 36.000 0.28 0.28 44.48 1.90
4162 4836 5.783111 ACCTTTCTTGGACATTGTTAATGC 58.217 37.500 1.68 0.00 42.69 3.56
4163 4837 5.539955 ACCTTTCTTGGACATTGTTAATGCT 59.460 36.000 1.68 0.00 42.69 3.79
4164 4838 6.719370 ACCTTTCTTGGACATTGTTAATGCTA 59.281 34.615 1.68 0.00 42.69 3.49
4165 4839 7.232534 ACCTTTCTTGGACATTGTTAATGCTAA 59.767 33.333 1.68 0.00 42.69 3.09
4166 4840 7.756722 CCTTTCTTGGACATTGTTAATGCTAAG 59.243 37.037 1.68 8.02 42.69 2.18
4167 4841 7.994425 TTCTTGGACATTGTTAATGCTAAGA 57.006 32.000 14.33 14.33 42.69 2.10
4168 4842 8.579850 TTCTTGGACATTGTTAATGCTAAGAT 57.420 30.769 16.73 0.00 42.69 2.40
4169 4843 9.679661 TTCTTGGACATTGTTAATGCTAAGATA 57.320 29.630 16.73 10.42 42.69 1.98
4170 4844 9.330063 TCTTGGACATTGTTAATGCTAAGATAG 57.670 33.333 14.33 0.00 42.69 2.08
4171 4845 9.330063 CTTGGACATTGTTAATGCTAAGATAGA 57.670 33.333 12.21 0.00 42.69 1.98
4172 4846 9.851686 TTGGACATTGTTAATGCTAAGATAGAT 57.148 29.630 1.68 0.00 42.69 1.98
4173 4847 9.851686 TGGACATTGTTAATGCTAAGATAGATT 57.148 29.630 1.68 0.00 42.69 2.40
4175 4849 9.604626 GACATTGTTAATGCTAAGATAGATTGC 57.395 33.333 1.68 0.00 42.69 3.56
4176 4850 8.571336 ACATTGTTAATGCTAAGATAGATTGCC 58.429 33.333 1.68 0.00 42.69 4.52
4177 4851 8.570488 CATTGTTAATGCTAAGATAGATTGCCA 58.430 33.333 0.00 0.00 31.20 4.92
4178 4852 8.696043 TTGTTAATGCTAAGATAGATTGCCAT 57.304 30.769 0.00 0.00 0.00 4.40
4179 4853 9.791801 TTGTTAATGCTAAGATAGATTGCCATA 57.208 29.630 0.00 0.00 0.00 2.74
4180 4854 9.791801 TGTTAATGCTAAGATAGATTGCCATAA 57.208 29.630 0.00 0.00 0.00 1.90
4184 4858 9.578576 AATGCTAAGATAGATTGCCATAAAGAA 57.421 29.630 0.00 0.00 0.00 2.52
4185 4859 8.978874 TGCTAAGATAGATTGCCATAAAGAAA 57.021 30.769 0.00 0.00 0.00 2.52
4186 4860 8.840321 TGCTAAGATAGATTGCCATAAAGAAAC 58.160 33.333 0.00 0.00 0.00 2.78
4187 4861 8.012241 GCTAAGATAGATTGCCATAAAGAAACG 58.988 37.037 0.00 0.00 0.00 3.60
4188 4862 6.867662 AGATAGATTGCCATAAAGAAACGG 57.132 37.500 0.00 0.00 0.00 4.44
4189 4863 6.357367 AGATAGATTGCCATAAAGAAACGGT 58.643 36.000 0.00 0.00 0.00 4.83
4190 4864 4.965119 AGATTGCCATAAAGAAACGGTC 57.035 40.909 0.00 0.00 0.00 4.79
4191 4865 4.331968 AGATTGCCATAAAGAAACGGTCA 58.668 39.130 0.00 0.00 0.00 4.02
4192 4866 4.396166 AGATTGCCATAAAGAAACGGTCAG 59.604 41.667 0.00 0.00 0.00 3.51
4193 4867 3.134574 TGCCATAAAGAAACGGTCAGT 57.865 42.857 0.00 0.00 0.00 3.41
4194 4868 2.811431 TGCCATAAAGAAACGGTCAGTG 59.189 45.455 0.00 0.00 0.00 3.66
4195 4869 2.812011 GCCATAAAGAAACGGTCAGTGT 59.188 45.455 0.00 0.00 0.00 3.55
4196 4870 3.120304 GCCATAAAGAAACGGTCAGTGTC 60.120 47.826 0.00 0.00 37.36 3.67
4197 4871 4.062293 CCATAAAGAAACGGTCAGTGTCA 58.938 43.478 0.00 0.00 39.60 3.58
4198 4872 4.513692 CCATAAAGAAACGGTCAGTGTCAA 59.486 41.667 0.00 0.00 39.60 3.18
4199 4873 5.440685 CATAAAGAAACGGTCAGTGTCAAC 58.559 41.667 0.00 0.00 39.60 3.18
4200 4874 2.981859 AGAAACGGTCAGTGTCAACT 57.018 45.000 0.00 0.00 39.60 3.16
4201 4875 3.261981 AGAAACGGTCAGTGTCAACTT 57.738 42.857 0.00 0.00 39.60 2.66
4202 4876 3.606687 AGAAACGGTCAGTGTCAACTTT 58.393 40.909 0.00 0.00 39.60 2.66
4203 4877 3.374058 AGAAACGGTCAGTGTCAACTTTG 59.626 43.478 0.00 0.00 39.60 2.77
4204 4878 1.663695 ACGGTCAGTGTCAACTTTGG 58.336 50.000 0.00 0.00 32.98 3.28
4205 4879 1.065709 ACGGTCAGTGTCAACTTTGGT 60.066 47.619 0.00 0.00 32.98 3.67
4206 4880 1.330521 CGGTCAGTGTCAACTTTGGTG 59.669 52.381 0.00 0.00 32.98 4.17
4207 4881 2.639065 GGTCAGTGTCAACTTTGGTGA 58.361 47.619 0.00 0.00 32.98 4.02
4208 4882 3.214328 GGTCAGTGTCAACTTTGGTGAT 58.786 45.455 0.00 0.00 32.98 3.06
4209 4883 3.003689 GGTCAGTGTCAACTTTGGTGATG 59.996 47.826 0.00 0.00 32.98 3.07
4210 4884 3.627577 GTCAGTGTCAACTTTGGTGATGT 59.372 43.478 0.00 0.00 32.98 3.06
4211 4885 3.627123 TCAGTGTCAACTTTGGTGATGTG 59.373 43.478 0.00 0.00 32.98 3.21
4212 4886 2.951642 AGTGTCAACTTTGGTGATGTGG 59.048 45.455 0.00 0.00 30.14 4.17
4213 4887 1.680735 TGTCAACTTTGGTGATGTGGC 59.319 47.619 0.00 0.00 0.00 5.01
4214 4888 1.956477 GTCAACTTTGGTGATGTGGCT 59.044 47.619 0.00 0.00 0.00 4.75
4215 4889 2.030805 GTCAACTTTGGTGATGTGGCTC 60.031 50.000 0.00 0.00 0.00 4.70
4216 4890 1.955778 CAACTTTGGTGATGTGGCTCA 59.044 47.619 0.00 0.00 0.00 4.26
4217 4891 2.559668 CAACTTTGGTGATGTGGCTCAT 59.440 45.455 0.94 0.94 39.77 2.90
4218 4892 2.165167 ACTTTGGTGATGTGGCTCATG 58.835 47.619 6.80 0.00 36.83 3.07
4219 4893 2.224843 ACTTTGGTGATGTGGCTCATGA 60.225 45.455 6.80 0.00 36.83 3.07
4220 4894 2.583024 TTGGTGATGTGGCTCATGAA 57.417 45.000 6.80 0.00 36.83 2.57
4221 4895 2.812836 TGGTGATGTGGCTCATGAAT 57.187 45.000 6.80 0.00 36.83 2.57
4222 4896 3.090210 TGGTGATGTGGCTCATGAATT 57.910 42.857 6.80 0.00 36.83 2.17
4223 4897 3.433343 TGGTGATGTGGCTCATGAATTT 58.567 40.909 6.80 0.00 36.83 1.82
4224 4898 4.598022 TGGTGATGTGGCTCATGAATTTA 58.402 39.130 6.80 0.00 36.83 1.40
4225 4899 5.015515 TGGTGATGTGGCTCATGAATTTAA 58.984 37.500 6.80 0.00 36.83 1.52
4226 4900 5.657745 TGGTGATGTGGCTCATGAATTTAAT 59.342 36.000 6.80 0.00 36.83 1.40
4227 4901 6.154877 TGGTGATGTGGCTCATGAATTTAATT 59.845 34.615 6.80 0.00 36.83 1.40
4228 4902 7.043565 GGTGATGTGGCTCATGAATTTAATTT 58.956 34.615 6.80 0.00 36.83 1.82
4229 4903 7.223387 GGTGATGTGGCTCATGAATTTAATTTC 59.777 37.037 6.80 3.62 36.83 2.17
4230 4904 7.977853 GTGATGTGGCTCATGAATTTAATTTCT 59.022 33.333 6.80 0.00 36.83 2.52
4231 4905 7.977293 TGATGTGGCTCATGAATTTAATTTCTG 59.023 33.333 6.80 7.17 36.83 3.02
4232 4906 7.230849 TGTGGCTCATGAATTTAATTTCTGT 57.769 32.000 10.54 0.00 0.00 3.41
4233 4907 8.347004 TGTGGCTCATGAATTTAATTTCTGTA 57.653 30.769 10.54 0.00 0.00 2.74
4234 4908 8.801299 TGTGGCTCATGAATTTAATTTCTGTAA 58.199 29.630 10.54 0.00 0.00 2.41
4235 4909 9.294030 GTGGCTCATGAATTTAATTTCTGTAAG 57.706 33.333 10.54 5.40 0.00 2.34
4236 4910 9.023962 TGGCTCATGAATTTAATTTCTGTAAGT 57.976 29.630 10.54 0.00 33.76 2.24
4237 4911 9.860898 GGCTCATGAATTTAATTTCTGTAAGTT 57.139 29.630 10.54 0.00 33.76 2.66
4250 4924 8.658499 ATTTCTGTAAGTTTCGTAGACAAACT 57.342 30.769 0.00 0.00 44.34 2.66
4251 4925 7.689953 TTCTGTAAGTTTCGTAGACAAACTC 57.310 36.000 0.28 0.00 42.14 3.01
4252 4926 6.798482 TCTGTAAGTTTCGTAGACAAACTCA 58.202 36.000 0.28 0.00 42.14 3.41
4253 4927 7.431249 TCTGTAAGTTTCGTAGACAAACTCAT 58.569 34.615 0.28 0.00 42.14 2.90
4254 4928 8.570488 TCTGTAAGTTTCGTAGACAAACTCATA 58.430 33.333 0.28 0.00 42.14 2.15
4255 4929 9.188588 CTGTAAGTTTCGTAGACAAACTCATAA 57.811 33.333 0.28 0.00 42.14 1.90
4256 4930 9.701098 TGTAAGTTTCGTAGACAAACTCATAAT 57.299 29.630 0.28 0.00 42.14 1.28
4294 4968 8.000780 AGTAAGGATGAAATTATTGGTCTTGC 57.999 34.615 0.00 0.00 0.00 4.01
4295 4969 7.836183 AGTAAGGATGAAATTATTGGTCTTGCT 59.164 33.333 0.00 0.00 0.00 3.91
4296 4970 7.486407 AAGGATGAAATTATTGGTCTTGCTT 57.514 32.000 0.00 0.00 0.00 3.91
4297 4971 7.105241 AGGATGAAATTATTGGTCTTGCTTC 57.895 36.000 0.00 0.00 0.00 3.86
4298 4972 6.894103 AGGATGAAATTATTGGTCTTGCTTCT 59.106 34.615 0.00 0.00 0.00 2.85
4299 4973 8.055181 AGGATGAAATTATTGGTCTTGCTTCTA 58.945 33.333 0.00 0.00 0.00 2.10
4300 4974 8.854117 GGATGAAATTATTGGTCTTGCTTCTAT 58.146 33.333 0.00 0.00 0.00 1.98
4303 4977 9.023962 TGAAATTATTGGTCTTGCTTCTATTGT 57.976 29.630 0.00 0.00 0.00 2.71
4304 4978 9.508567 GAAATTATTGGTCTTGCTTCTATTGTC 57.491 33.333 0.00 0.00 0.00 3.18
4305 4979 6.662414 TTATTGGTCTTGCTTCTATTGTCG 57.338 37.500 0.00 0.00 0.00 4.35
4306 4980 3.678056 TGGTCTTGCTTCTATTGTCGT 57.322 42.857 0.00 0.00 0.00 4.34
4307 4981 4.794278 TGGTCTTGCTTCTATTGTCGTA 57.206 40.909 0.00 0.00 0.00 3.43
4308 4982 4.491676 TGGTCTTGCTTCTATTGTCGTAC 58.508 43.478 0.00 0.00 0.00 3.67
4309 4983 3.864003 GGTCTTGCTTCTATTGTCGTACC 59.136 47.826 0.00 0.00 0.00 3.34
4310 4984 4.381718 GGTCTTGCTTCTATTGTCGTACCT 60.382 45.833 0.00 0.00 0.00 3.08
4311 4985 4.799428 GTCTTGCTTCTATTGTCGTACCTC 59.201 45.833 0.00 0.00 0.00 3.85
4312 4986 3.795623 TGCTTCTATTGTCGTACCTCC 57.204 47.619 0.00 0.00 0.00 4.30
4313 4987 3.362706 TGCTTCTATTGTCGTACCTCCT 58.637 45.455 0.00 0.00 0.00 3.69
4314 4988 4.529897 TGCTTCTATTGTCGTACCTCCTA 58.470 43.478 0.00 0.00 0.00 2.94
4315 4989 5.138276 TGCTTCTATTGTCGTACCTCCTAT 58.862 41.667 0.00 0.00 0.00 2.57
4316 4990 6.301486 TGCTTCTATTGTCGTACCTCCTATA 58.699 40.000 0.00 0.00 0.00 1.31
4317 4991 6.430308 TGCTTCTATTGTCGTACCTCCTATAG 59.570 42.308 0.00 0.00 0.00 1.31
4318 4992 6.654161 GCTTCTATTGTCGTACCTCCTATAGA 59.346 42.308 0.00 0.00 0.00 1.98
4319 4993 7.337436 GCTTCTATTGTCGTACCTCCTATAGAT 59.663 40.741 0.00 0.00 0.00 1.98
4320 4994 8.789825 TTCTATTGTCGTACCTCCTATAGATC 57.210 38.462 0.00 0.00 0.00 2.75
4321 4995 7.337167 TCTATTGTCGTACCTCCTATAGATCC 58.663 42.308 0.00 0.00 0.00 3.36
4322 4996 4.987963 TGTCGTACCTCCTATAGATCCA 57.012 45.455 0.00 0.00 0.00 3.41
4323 4997 4.649692 TGTCGTACCTCCTATAGATCCAC 58.350 47.826 0.00 0.00 0.00 4.02
4339 5013 2.567985 TCCACGTTTCTTTGACCTTCC 58.432 47.619 0.00 0.00 0.00 3.46
4342 5016 2.949644 CACGTTTCTTTGACCTTCCCTT 59.050 45.455 0.00 0.00 0.00 3.95
4347 5021 5.348986 GTTTCTTTGACCTTCCCTTTGTTC 58.651 41.667 0.00 0.00 0.00 3.18
4359 5033 2.955660 CCCTTTGTTCACCTTGTTGCTA 59.044 45.455 0.00 0.00 0.00 3.49
4393 5068 0.453793 CACCGGCGCCAATAAATTCA 59.546 50.000 28.98 0.00 0.00 2.57
4399 5074 3.489059 CGGCGCCAATAAATTCACATTCT 60.489 43.478 28.98 0.00 0.00 2.40
4426 5101 3.764434 GTCCTCTCCTACATGACTTGTCA 59.236 47.826 0.00 5.89 39.87 3.58
4458 5133 3.454375 CTTCACAGTAGTGTCCGTTGTT 58.546 45.455 0.00 0.00 46.01 2.83
4464 5139 2.166870 AGTAGTGTCCGTTGTTGTGTCA 59.833 45.455 0.00 0.00 0.00 3.58
4467 5142 1.937223 GTGTCCGTTGTTGTGTCATCA 59.063 47.619 0.00 0.00 0.00 3.07
4489 5165 1.701847 ACACAAGGGCAAGATGAGAGT 59.298 47.619 0.00 0.00 0.00 3.24
4531 5207 6.358991 TCATGCATTGAAGATGACTTGGATA 58.641 36.000 0.00 0.00 36.39 2.59
4532 5208 6.829811 TCATGCATTGAAGATGACTTGGATAA 59.170 34.615 0.00 0.00 36.39 1.75
4543 5219 7.429633 AGATGACTTGGATAATTCGAGTAGTG 58.570 38.462 0.00 0.00 0.00 2.74
4564 5240 1.271871 CCCATACTTGGAGTTGGCACA 60.272 52.381 0.00 0.00 46.92 4.57
4598 5281 3.132467 GTGTAGTAGACTCCATGTTCCCC 59.868 52.174 0.00 0.00 0.00 4.81
4629 5312 7.762588 ACTATAGGCTTGTTATCGATAGTGT 57.237 36.000 5.09 0.00 31.47 3.55
4630 5313 8.859236 ACTATAGGCTTGTTATCGATAGTGTA 57.141 34.615 5.09 0.00 31.47 2.90
4631 5314 8.728833 ACTATAGGCTTGTTATCGATAGTGTAC 58.271 37.037 5.09 1.76 31.47 2.90
4632 5315 7.762588 ATAGGCTTGTTATCGATAGTGTACT 57.237 36.000 5.09 4.45 37.40 2.73
4633 5316 6.074544 AGGCTTGTTATCGATAGTGTACTC 57.925 41.667 5.09 0.00 37.40 2.59
4634 5317 5.593095 AGGCTTGTTATCGATAGTGTACTCA 59.407 40.000 5.09 0.00 37.40 3.41
4635 5318 5.686397 GGCTTGTTATCGATAGTGTACTCAC 59.314 44.000 5.09 0.00 44.15 3.51
4636 5319 6.263344 GCTTGTTATCGATAGTGTACTCACA 58.737 40.000 5.09 1.94 46.01 3.58
4637 5320 6.750501 GCTTGTTATCGATAGTGTACTCACAA 59.249 38.462 5.09 9.48 46.01 3.33
4638 5321 7.043986 GCTTGTTATCGATAGTGTACTCACAAG 60.044 40.741 24.67 24.67 46.01 3.16
4639 5322 7.387119 TGTTATCGATAGTGTACTCACAAGT 57.613 36.000 5.09 0.00 46.01 3.16
4640 5323 8.496707 TGTTATCGATAGTGTACTCACAAGTA 57.503 34.615 5.09 0.00 46.01 2.24
4767 5484 8.263640 AGAATAGTCTTGAACTGATTGTGCTAT 58.736 33.333 0.00 0.00 39.11 2.97
4769 5486 9.890629 AATAGTCTTGAACTGATTGTGCTATTA 57.109 29.630 0.00 0.00 39.11 0.98
4772 5489 9.236006 AGTCTTGAACTGATTGTGCTATTAATT 57.764 29.630 0.00 0.00 36.65 1.40
4777 5496 7.916977 TGAACTGATTGTGCTATTAATTGATGC 59.083 33.333 0.77 0.00 0.00 3.91
4805 5524 7.928167 CCTCATGATAAGACTGCTACAACAATA 59.072 37.037 0.00 0.00 0.00 1.90
4841 5560 2.569657 CTAGTACACGGCGCCACA 59.430 61.111 28.98 4.48 0.00 4.17
4932 5651 2.239654 TCACTCCTCCCATTGGTCATTC 59.760 50.000 1.20 0.00 0.00 2.67
4966 5685 5.009631 ACACTTGTACCATGTATGCACATT 58.990 37.500 0.00 0.00 42.98 2.71
4972 5691 2.291475 ACCATGTATGCACATTGTGGGA 60.291 45.455 18.05 1.35 42.98 4.37
4975 5694 1.750206 TGTATGCACATTGTGGGATGC 59.250 47.619 18.05 9.55 38.59 3.91
4978 5697 2.440517 TGCACATTGTGGGATGCTAT 57.559 45.000 18.05 0.00 38.90 2.97
5039 5758 2.668457 GCGACACGACAAGATTGAAGAT 59.332 45.455 0.00 0.00 0.00 2.40
5050 5769 4.294416 AGATTGAAGATGAGGTACGTCG 57.706 45.455 10.75 0.00 39.31 5.12
5076 5795 3.717899 GCACTTGCACACGAGTCA 58.282 55.556 0.00 0.00 38.57 3.41
5078 5797 0.875908 GCACTTGCACACGAGTCAGA 60.876 55.000 0.00 0.00 38.57 3.27
5088 5807 2.959707 ACACGAGTCAGAAGAACTCCTT 59.040 45.455 0.00 0.00 37.93 3.36
5093 5812 1.048601 TCAGAAGAACTCCTTGCGGT 58.951 50.000 0.00 0.00 34.68 5.68
5096 5815 0.790814 GAAGAACTCCTTGCGGTTCG 59.209 55.000 0.00 0.00 44.33 3.95
5098 5817 1.301479 GAACTCCTTGCGGTTCGGT 60.301 57.895 0.00 0.00 33.69 4.69
5116 5835 1.581934 GTTGGCAAGGCTTCCAAAAC 58.418 50.000 23.58 14.53 43.25 2.43
5148 5867 4.813235 GCCCGGCCCAATAGCACA 62.813 66.667 0.00 0.00 0.00 4.57
5183 5902 4.682860 GGACACAAAAATGTCTGATTGCTG 59.317 41.667 5.92 0.00 46.85 4.41
5186 5905 5.163530 ACACAAAAATGTCTGATTGCTGTCA 60.164 36.000 0.00 0.00 0.00 3.58
5203 5922 4.210832 TGTCAATACTCGATAGCACTCG 57.789 45.455 1.86 1.86 39.99 4.18
5215 5934 4.201589 CGATAGCACTCGGTACAAAAACAG 60.202 45.833 0.00 0.00 35.03 3.16
5216 5935 1.602377 AGCACTCGGTACAAAAACAGC 59.398 47.619 0.00 0.00 0.00 4.40
5227 5946 4.391405 ACAAAAACAGCAGAGAAAAGGG 57.609 40.909 0.00 0.00 0.00 3.95
5230 5949 3.297134 AAACAGCAGAGAAAAGGGTCA 57.703 42.857 0.00 0.00 0.00 4.02
5246 5965 9.431887 GAAAAGGGTCATTTATTTAAGGGAAAC 57.568 33.333 0.00 0.00 0.00 2.78
5247 5966 8.499288 AAAGGGTCATTTATTTAAGGGAAACA 57.501 30.769 0.00 0.00 0.00 2.83
5249 5968 8.679344 AGGGTCATTTATTTAAGGGAAACAAT 57.321 30.769 0.00 0.00 0.00 2.71
5264 5983 1.905637 ACAATTCCCTTCAACCGACC 58.094 50.000 0.00 0.00 0.00 4.79
5301 6021 1.040893 TACGCCTCCATGTCCGTCAT 61.041 55.000 0.00 0.00 37.22 3.06
5303 6023 0.597637 CGCCTCCATGTCCGTCATAC 60.598 60.000 0.00 0.00 34.67 2.39
5305 6025 1.539065 GCCTCCATGTCCGTCATACAG 60.539 57.143 0.00 0.00 34.67 2.74
5306 6026 1.757118 CCTCCATGTCCGTCATACAGT 59.243 52.381 0.00 0.00 34.67 3.55
5321 6041 6.797513 CGTCATACAGTCTCTTAATCATACGG 59.202 42.308 0.00 0.00 0.00 4.02
5322 6042 7.520131 CGTCATACAGTCTCTTAATCATACGGT 60.520 40.741 0.00 0.00 0.00 4.83
5324 6044 7.501225 TCATACAGTCTCTTAATCATACGGTCA 59.499 37.037 0.00 0.00 0.00 4.02
5329 6049 2.367567 TCTTAATCATACGGTCAGGGGC 59.632 50.000 0.00 0.00 0.00 5.80
5347 6067 1.995626 CCAACCCCTCCGAGTCCAT 60.996 63.158 0.00 0.00 0.00 3.41
5395 6147 0.615850 AGAGGTTCTGCAACTAGCCC 59.384 55.000 0.00 0.00 44.83 5.19
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
12 13 7.094805 GCTACTATCTCAGAGTCAAGTCCATAG 60.095 44.444 0.00 0.00 0.00 2.23
55 56 4.219288 AGGGAGATCAACATGAGCAAAAAC 59.781 41.667 0.00 0.00 34.77 2.43
59 60 4.384537 CCTTAGGGAGATCAACATGAGCAA 60.385 45.833 0.00 0.00 34.77 3.91
61 62 3.389329 TCCTTAGGGAGATCAACATGAGC 59.611 47.826 0.00 0.00 36.57 4.26
114 115 4.514781 AACCGGTTCTTTAATTTCTGCC 57.485 40.909 15.86 0.00 0.00 4.85
116 117 7.368059 AGCTAAAACCGGTTCTTTAATTTCTG 58.632 34.615 22.53 7.17 0.00 3.02
202 203 1.368374 TCCTAACAGGGAAAGGTGGG 58.632 55.000 0.00 0.00 35.59 4.61
238 239 0.586319 CGCGAACCACTGTTGACATT 59.414 50.000 0.00 0.00 33.97 2.71
239 240 0.249699 TCGCGAACCACTGTTGACAT 60.250 50.000 6.20 0.00 33.97 3.06
241 242 0.865769 ATTCGCGAACCACTGTTGAC 59.134 50.000 26.00 0.00 33.97 3.18
260 261 9.914834 AGATGGTTTAGGTGCTTTAATATTACA 57.085 29.630 0.00 0.00 0.00 2.41
344 345 9.737844 ACAAAAATAAATAACATGCCCTTCAAT 57.262 25.926 0.00 0.00 0.00 2.57
349 350 8.538701 TCATCACAAAAATAAATAACATGCCCT 58.461 29.630 0.00 0.00 0.00 5.19
362 363 7.686438 TTCTAGCTGCTTCATCACAAAAATA 57.314 32.000 7.79 0.00 0.00 1.40
364 365 6.579666 ATTCTAGCTGCTTCATCACAAAAA 57.420 33.333 7.79 0.00 0.00 1.94
379 380 3.084786 GTCTGGTTTGGCAATTCTAGCT 58.915 45.455 0.00 0.00 0.00 3.32
454 455 5.579753 AACCATGATAGCAATGATCTCCT 57.420 39.130 0.00 0.00 0.00 3.69
461 462 8.974408 CAAATCACATAAACCATGATAGCAATG 58.026 33.333 0.00 0.00 38.10 2.82
486 487 1.128200 AACACTCACACTAGCACCCA 58.872 50.000 0.00 0.00 0.00 4.51
502 503 8.219178 TCTTGGTATAAGGTAAAAGGAACAACA 58.781 33.333 0.00 0.00 0.00 3.33
504 505 9.643735 TTTCTTGGTATAAGGTAAAAGGAACAA 57.356 29.630 0.00 0.00 0.00 2.83
551 552 9.950496 AGTAACATCAATGTCTTCTATTTCAGT 57.050 29.630 0.00 0.00 40.80 3.41
575 576 8.998277 TGGTCTCTATTAGCTAGTTTGATAGT 57.002 34.615 8.54 0.00 0.00 2.12
576 577 8.519526 CCTGGTCTCTATTAGCTAGTTTGATAG 58.480 40.741 0.00 0.00 0.00 2.08
577 578 7.451877 CCCTGGTCTCTATTAGCTAGTTTGATA 59.548 40.741 0.00 0.00 0.00 2.15
578 579 6.268847 CCCTGGTCTCTATTAGCTAGTTTGAT 59.731 42.308 0.00 0.00 0.00 2.57
579 580 5.598830 CCCTGGTCTCTATTAGCTAGTTTGA 59.401 44.000 0.00 0.00 0.00 2.69
580 581 5.740513 GCCCTGGTCTCTATTAGCTAGTTTG 60.741 48.000 0.00 0.00 0.00 2.93
581 582 4.345547 GCCCTGGTCTCTATTAGCTAGTTT 59.654 45.833 0.00 0.00 0.00 2.66
582 583 3.898741 GCCCTGGTCTCTATTAGCTAGTT 59.101 47.826 0.00 0.00 0.00 2.24
583 584 3.502356 GCCCTGGTCTCTATTAGCTAGT 58.498 50.000 0.00 0.00 0.00 2.57
584 585 2.829120 GGCCCTGGTCTCTATTAGCTAG 59.171 54.545 0.00 0.00 0.00 3.42
585 586 2.818216 CGGCCCTGGTCTCTATTAGCTA 60.818 54.545 0.00 0.00 0.00 3.32
586 587 1.723288 GGCCCTGGTCTCTATTAGCT 58.277 55.000 0.00 0.00 0.00 3.32
587 588 0.318762 CGGCCCTGGTCTCTATTAGC 59.681 60.000 0.00 0.00 0.00 3.09
588 589 0.969894 CCGGCCCTGGTCTCTATTAG 59.030 60.000 0.00 0.00 0.00 1.73
589 590 0.559205 TCCGGCCCTGGTCTCTATTA 59.441 55.000 0.00 0.00 0.00 0.98
590 591 0.104934 ATCCGGCCCTGGTCTCTATT 60.105 55.000 0.00 0.00 0.00 1.73
591 592 0.543174 GATCCGGCCCTGGTCTCTAT 60.543 60.000 0.00 0.00 0.00 1.98
592 593 1.152525 GATCCGGCCCTGGTCTCTA 60.153 63.158 0.00 0.00 0.00 2.43
593 594 2.444895 GATCCGGCCCTGGTCTCT 60.445 66.667 0.00 0.00 0.00 3.10
594 595 2.444895 AGATCCGGCCCTGGTCTC 60.445 66.667 0.00 0.00 0.00 3.36
595 596 2.765807 CAGATCCGGCCCTGGTCT 60.766 66.667 13.18 0.00 0.00 3.85
596 597 3.866582 CCAGATCCGGCCCTGGTC 61.867 72.222 25.08 4.97 43.71 4.02
879 1466 3.854669 CGGAGGCTGGAGGCGATT 61.855 66.667 0.00 0.00 46.23 3.34
910 1497 2.423446 GCCCTGGCGATCGAATCT 59.577 61.111 21.57 0.00 0.00 2.40
1212 1808 2.574006 TTCAGCAAGTGCAAGATCCT 57.426 45.000 6.00 0.00 45.16 3.24
1873 2532 7.870826 TGTATTCATGTTGGTAAAGTGTTCAG 58.129 34.615 0.00 0.00 0.00 3.02
1981 2640 3.118112 CCTGAGCAATACCTGTCTCCAAT 60.118 47.826 0.00 0.00 31.15 3.16
2198 2864 6.232581 AGAAGTAAGATCAACTCATCCTGG 57.767 41.667 0.00 0.00 0.00 4.45
2537 3206 5.402398 GGATTAACTTCAAGCAAGCGATTT 58.598 37.500 0.00 0.00 35.17 2.17
3094 3763 1.032014 GCCCATATCCAACGCAATGT 58.968 50.000 0.00 0.00 0.00 2.71
3955 4627 1.953686 CCAAGTAAATGGTATGGGCCG 59.046 52.381 0.00 0.00 35.65 6.13
4011 4685 5.481824 TCTCAAATGGTGTGATAGTGTCTCT 59.518 40.000 0.00 0.00 0.00 3.10
4012 4686 5.724328 TCTCAAATGGTGTGATAGTGTCTC 58.276 41.667 0.00 0.00 0.00 3.36
4013 4687 5.745312 TCTCAAATGGTGTGATAGTGTCT 57.255 39.130 0.00 0.00 0.00 3.41
4014 4688 6.372659 ACAATCTCAAATGGTGTGATAGTGTC 59.627 38.462 0.00 0.00 39.09 3.67
4015 4689 6.240894 ACAATCTCAAATGGTGTGATAGTGT 58.759 36.000 0.00 0.00 39.09 3.55
4016 4690 6.748333 ACAATCTCAAATGGTGTGATAGTG 57.252 37.500 0.00 0.00 39.09 2.74
4017 4691 8.321353 TCTAACAATCTCAAATGGTGTGATAGT 58.679 33.333 0.00 0.00 39.09 2.12
4018 4692 8.722480 TCTAACAATCTCAAATGGTGTGATAG 57.278 34.615 0.00 0.00 39.09 2.08
4019 4693 8.539544 TCTCTAACAATCTCAAATGGTGTGATA 58.460 33.333 0.00 0.00 39.09 2.15
4020 4694 7.397221 TCTCTAACAATCTCAAATGGTGTGAT 58.603 34.615 0.00 0.00 41.22 3.06
4021 4695 6.768483 TCTCTAACAATCTCAAATGGTGTGA 58.232 36.000 0.00 0.00 34.38 3.58
4022 4696 7.120285 ACATCTCTAACAATCTCAAATGGTGTG 59.880 37.037 0.00 0.00 0.00 3.82
4023 4697 7.170965 ACATCTCTAACAATCTCAAATGGTGT 58.829 34.615 0.00 0.00 0.00 4.16
4024 4698 7.621428 ACATCTCTAACAATCTCAAATGGTG 57.379 36.000 0.00 0.00 0.00 4.17
4025 4699 7.884877 TCAACATCTCTAACAATCTCAAATGGT 59.115 33.333 0.00 0.00 0.00 3.55
4026 4700 8.272545 TCAACATCTCTAACAATCTCAAATGG 57.727 34.615 0.00 0.00 0.00 3.16
4027 4701 9.770503 CTTCAACATCTCTAACAATCTCAAATG 57.229 33.333 0.00 0.00 0.00 2.32
4028 4702 9.512588 ACTTCAACATCTCTAACAATCTCAAAT 57.487 29.630 0.00 0.00 0.00 2.32
4029 4703 8.908786 ACTTCAACATCTCTAACAATCTCAAA 57.091 30.769 0.00 0.00 0.00 2.69
4030 4704 8.370940 AGACTTCAACATCTCTAACAATCTCAA 58.629 33.333 0.00 0.00 0.00 3.02
4031 4705 7.901029 AGACTTCAACATCTCTAACAATCTCA 58.099 34.615 0.00 0.00 0.00 3.27
4032 4706 8.655092 CAAGACTTCAACATCTCTAACAATCTC 58.345 37.037 0.00 0.00 0.00 2.75
4033 4707 8.153550 ACAAGACTTCAACATCTCTAACAATCT 58.846 33.333 0.00 0.00 0.00 2.40
4034 4708 8.226448 CACAAGACTTCAACATCTCTAACAATC 58.774 37.037 0.00 0.00 0.00 2.67
4035 4709 7.716998 ACACAAGACTTCAACATCTCTAACAAT 59.283 33.333 0.00 0.00 0.00 2.71
4036 4710 7.011389 CACACAAGACTTCAACATCTCTAACAA 59.989 37.037 0.00 0.00 0.00 2.83
4037 4711 6.479990 CACACAAGACTTCAACATCTCTAACA 59.520 38.462 0.00 0.00 0.00 2.41
4038 4712 6.073548 CCACACAAGACTTCAACATCTCTAAC 60.074 42.308 0.00 0.00 0.00 2.34
4039 4713 5.991606 CCACACAAGACTTCAACATCTCTAA 59.008 40.000 0.00 0.00 0.00 2.10
4040 4714 5.511373 CCCACACAAGACTTCAACATCTCTA 60.511 44.000 0.00 0.00 0.00 2.43
4041 4715 4.384056 CCACACAAGACTTCAACATCTCT 58.616 43.478 0.00 0.00 0.00 3.10
4042 4716 3.499918 CCCACACAAGACTTCAACATCTC 59.500 47.826 0.00 0.00 0.00 2.75
4043 4717 3.136443 TCCCACACAAGACTTCAACATCT 59.864 43.478 0.00 0.00 0.00 2.90
4044 4718 3.476552 TCCCACACAAGACTTCAACATC 58.523 45.455 0.00 0.00 0.00 3.06
4045 4719 3.576078 TCCCACACAAGACTTCAACAT 57.424 42.857 0.00 0.00 0.00 2.71
4046 4720 3.358111 TTCCCACACAAGACTTCAACA 57.642 42.857 0.00 0.00 0.00 3.33
4047 4721 4.712122 TTTTCCCACACAAGACTTCAAC 57.288 40.909 0.00 0.00 0.00 3.18
4048 4722 7.411486 TTTATTTTCCCACACAAGACTTCAA 57.589 32.000 0.00 0.00 0.00 2.69
4049 4723 7.411486 TTTTATTTTCCCACACAAGACTTCA 57.589 32.000 0.00 0.00 0.00 3.02
4050 4724 9.406828 GTATTTTATTTTCCCACACAAGACTTC 57.593 33.333 0.00 0.00 0.00 3.01
4051 4725 8.079809 CGTATTTTATTTTCCCACACAAGACTT 58.920 33.333 0.00 0.00 0.00 3.01
4052 4726 7.590279 CGTATTTTATTTTCCCACACAAGACT 58.410 34.615 0.00 0.00 0.00 3.24
4053 4727 6.307077 GCGTATTTTATTTTCCCACACAAGAC 59.693 38.462 0.00 0.00 0.00 3.01
4054 4728 6.207810 AGCGTATTTTATTTTCCCACACAAGA 59.792 34.615 0.00 0.00 0.00 3.02
4055 4729 6.386654 AGCGTATTTTATTTTCCCACACAAG 58.613 36.000 0.00 0.00 0.00 3.16
4056 4730 6.334102 AGCGTATTTTATTTTCCCACACAA 57.666 33.333 0.00 0.00 0.00 3.33
4057 4731 5.968528 AGCGTATTTTATTTTCCCACACA 57.031 34.783 0.00 0.00 0.00 3.72
4058 4732 6.964934 CAGTAGCGTATTTTATTTTCCCACAC 59.035 38.462 0.00 0.00 0.00 3.82
4059 4733 6.879993 TCAGTAGCGTATTTTATTTTCCCACA 59.120 34.615 0.00 0.00 0.00 4.17
4060 4734 7.311364 TCAGTAGCGTATTTTATTTTCCCAC 57.689 36.000 0.00 0.00 0.00 4.61
4061 4735 8.514330 AATCAGTAGCGTATTTTATTTTCCCA 57.486 30.769 0.00 0.00 0.00 4.37
4062 4736 9.797556 AAAATCAGTAGCGTATTTTATTTTCCC 57.202 29.630 0.00 0.00 32.51 3.97
4070 4744 9.654663 AGAACTAGAAAATCAGTAGCGTATTTT 57.345 29.630 0.00 0.00 35.95 1.82
4071 4745 9.654663 AAGAACTAGAAAATCAGTAGCGTATTT 57.345 29.630 0.00 0.00 0.00 1.40
4072 4746 9.088512 CAAGAACTAGAAAATCAGTAGCGTATT 57.911 33.333 0.00 0.00 0.00 1.89
4073 4747 7.707035 CCAAGAACTAGAAAATCAGTAGCGTAT 59.293 37.037 0.00 0.00 0.00 3.06
4074 4748 7.033791 CCAAGAACTAGAAAATCAGTAGCGTA 58.966 38.462 0.00 0.00 0.00 4.42
4075 4749 5.869888 CCAAGAACTAGAAAATCAGTAGCGT 59.130 40.000 0.00 0.00 0.00 5.07
4076 4750 5.869888 ACCAAGAACTAGAAAATCAGTAGCG 59.130 40.000 0.00 0.00 0.00 4.26
4077 4751 7.604545 AGAACCAAGAACTAGAAAATCAGTAGC 59.395 37.037 0.00 0.00 0.00 3.58
4078 4752 9.145865 GAGAACCAAGAACTAGAAAATCAGTAG 57.854 37.037 0.00 0.00 0.00 2.57
4079 4753 8.095169 GGAGAACCAAGAACTAGAAAATCAGTA 58.905 37.037 0.00 0.00 35.97 2.74
4080 4754 6.937465 GGAGAACCAAGAACTAGAAAATCAGT 59.063 38.462 0.00 0.00 35.97 3.41
4081 4755 6.936900 TGGAGAACCAAGAACTAGAAAATCAG 59.063 38.462 0.00 0.00 43.91 2.90
4082 4756 6.837312 TGGAGAACCAAGAACTAGAAAATCA 58.163 36.000 0.00 0.00 43.91 2.57
4092 4766 8.812189 AAAGTCATCTTGTGGAGAACCAAGAAC 61.812 40.741 6.22 2.14 39.33 3.01
4093 4767 6.860180 AAAGTCATCTTGTGGAGAACCAAGAA 60.860 38.462 6.22 0.00 39.33 2.52
4094 4768 5.397899 AAAGTCATCTTGTGGAGAACCAAGA 60.398 40.000 4.73 4.73 39.33 3.02
4095 4769 4.823989 AAAGTCATCTTGTGGAGAACCAAG 59.176 41.667 0.00 0.00 39.33 3.61
4096 4770 4.792068 AAAGTCATCTTGTGGAGAACCAA 58.208 39.130 0.00 0.00 39.33 3.67
4097 4771 4.437682 AAAGTCATCTTGTGGAGAACCA 57.562 40.909 0.00 0.00 38.06 3.67
4098 4772 4.580580 ACAAAAGTCATCTTGTGGAGAACC 59.419 41.667 3.69 0.00 41.73 3.62
4099 4773 5.278022 GGACAAAAGTCATCTTGTGGAGAAC 60.278 44.000 3.69 0.00 41.73 3.01
4100 4774 4.821805 GGACAAAAGTCATCTTGTGGAGAA 59.178 41.667 3.69 0.00 41.73 2.87
4101 4775 4.389374 GGACAAAAGTCATCTTGTGGAGA 58.611 43.478 3.69 0.00 41.73 3.71
4102 4776 3.503748 GGGACAAAAGTCATCTTGTGGAG 59.496 47.826 3.69 0.00 41.73 3.86
4103 4777 3.117701 TGGGACAAAAGTCATCTTGTGGA 60.118 43.478 3.69 0.00 41.73 4.02
4104 4778 3.221771 TGGGACAAAAGTCATCTTGTGG 58.778 45.455 3.69 0.00 41.73 4.17
4115 4789 8.630037 GGTCTACCAAATATTATGGGACAAAAG 58.370 37.037 16.24 7.61 42.48 2.27
4116 4790 8.340757 AGGTCTACCAAATATTATGGGACAAAA 58.659 33.333 16.24 0.47 42.48 2.44
4117 4791 7.878495 AGGTCTACCAAATATTATGGGACAAA 58.122 34.615 16.24 0.00 42.48 2.83
4118 4792 7.460214 AGGTCTACCAAATATTATGGGACAA 57.540 36.000 16.24 1.03 42.48 3.18
4119 4793 7.460214 AAGGTCTACCAAATATTATGGGACA 57.540 36.000 16.24 0.00 42.48 4.02
4120 4794 8.218488 AGAAAGGTCTACCAAATATTATGGGAC 58.782 37.037 16.24 14.14 42.48 4.46
4121 4795 8.344939 AGAAAGGTCTACCAAATATTATGGGA 57.655 34.615 16.24 9.99 42.48 4.37
4122 4796 8.850156 CAAGAAAGGTCTACCAAATATTATGGG 58.150 37.037 16.24 9.34 36.16 4.00
4123 4797 8.850156 CCAAGAAAGGTCTACCAAATATTATGG 58.150 37.037 12.43 12.43 37.24 2.74
4124 4798 9.627123 TCCAAGAAAGGTCTACCAAATATTATG 57.373 33.333 1.26 0.00 38.89 1.90
4125 4799 9.628500 GTCCAAGAAAGGTCTACCAAATATTAT 57.372 33.333 1.26 0.00 38.89 1.28
4126 4800 8.607713 TGTCCAAGAAAGGTCTACCAAATATTA 58.392 33.333 1.26 0.00 38.89 0.98
4127 4801 7.466804 TGTCCAAGAAAGGTCTACCAAATATT 58.533 34.615 1.26 0.00 38.89 1.28
4128 4802 7.027874 TGTCCAAGAAAGGTCTACCAAATAT 57.972 36.000 1.26 0.00 38.89 1.28
4129 4803 6.442541 TGTCCAAGAAAGGTCTACCAAATA 57.557 37.500 1.26 0.00 38.89 1.40
4130 4804 5.319043 TGTCCAAGAAAGGTCTACCAAAT 57.681 39.130 1.26 0.00 38.89 2.32
4131 4805 4.781775 TGTCCAAGAAAGGTCTACCAAA 57.218 40.909 1.26 0.00 38.89 3.28
4132 4806 4.993705 ATGTCCAAGAAAGGTCTACCAA 57.006 40.909 1.26 0.00 38.89 3.67
4133 4807 4.104102 ACAATGTCCAAGAAAGGTCTACCA 59.896 41.667 1.26 0.00 38.89 3.25
4134 4808 4.652822 ACAATGTCCAAGAAAGGTCTACC 58.347 43.478 0.00 0.00 32.16 3.18
4135 4809 7.739498 TTAACAATGTCCAAGAAAGGTCTAC 57.261 36.000 0.00 0.00 32.16 2.59
4136 4810 7.094377 GCATTAACAATGTCCAAGAAAGGTCTA 60.094 37.037 1.24 0.00 41.01 2.59
4137 4811 6.294731 GCATTAACAATGTCCAAGAAAGGTCT 60.295 38.462 1.24 0.00 41.01 3.85
4138 4812 5.863935 GCATTAACAATGTCCAAGAAAGGTC 59.136 40.000 1.24 0.00 41.01 3.85
4139 4813 5.539955 AGCATTAACAATGTCCAAGAAAGGT 59.460 36.000 1.24 0.00 41.01 3.50
4140 4814 6.029346 AGCATTAACAATGTCCAAGAAAGG 57.971 37.500 1.24 0.00 41.01 3.11
4141 4815 8.514594 TCTTAGCATTAACAATGTCCAAGAAAG 58.485 33.333 1.24 0.00 41.01 2.62
4142 4816 8.402798 TCTTAGCATTAACAATGTCCAAGAAA 57.597 30.769 1.24 0.00 41.01 2.52
4143 4817 7.994425 TCTTAGCATTAACAATGTCCAAGAA 57.006 32.000 1.24 0.00 41.01 2.52
4144 4818 9.330063 CTATCTTAGCATTAACAATGTCCAAGA 57.670 33.333 11.08 11.08 41.01 3.02
4145 4819 9.330063 TCTATCTTAGCATTAACAATGTCCAAG 57.670 33.333 1.24 3.11 41.01 3.61
4146 4820 9.851686 ATCTATCTTAGCATTAACAATGTCCAA 57.148 29.630 1.24 0.00 41.01 3.53
4147 4821 9.851686 AATCTATCTTAGCATTAACAATGTCCA 57.148 29.630 1.24 0.00 41.01 4.02
4149 4823 9.604626 GCAATCTATCTTAGCATTAACAATGTC 57.395 33.333 1.24 0.00 41.01 3.06
4150 4824 8.571336 GGCAATCTATCTTAGCATTAACAATGT 58.429 33.333 1.24 0.00 41.01 2.71
4151 4825 8.570488 TGGCAATCTATCTTAGCATTAACAATG 58.430 33.333 0.00 0.00 41.85 2.82
4152 4826 8.696043 TGGCAATCTATCTTAGCATTAACAAT 57.304 30.769 0.00 0.00 0.00 2.71
4153 4827 8.696043 ATGGCAATCTATCTTAGCATTAACAA 57.304 30.769 0.00 0.00 0.00 2.83
4154 4828 9.791801 TTATGGCAATCTATCTTAGCATTAACA 57.208 29.630 0.00 0.00 0.00 2.41
4158 4832 9.578576 TTCTTTATGGCAATCTATCTTAGCATT 57.421 29.630 0.00 0.00 0.00 3.56
4159 4833 9.578576 TTTCTTTATGGCAATCTATCTTAGCAT 57.421 29.630 0.00 0.00 0.00 3.79
4160 4834 8.840321 GTTTCTTTATGGCAATCTATCTTAGCA 58.160 33.333 0.00 0.00 0.00 3.49
4161 4835 8.012241 CGTTTCTTTATGGCAATCTATCTTAGC 58.988 37.037 0.00 0.00 0.00 3.09
4162 4836 8.499162 CCGTTTCTTTATGGCAATCTATCTTAG 58.501 37.037 0.00 0.00 0.00 2.18
4163 4837 7.990886 ACCGTTTCTTTATGGCAATCTATCTTA 59.009 33.333 0.00 0.00 0.00 2.10
4164 4838 6.828785 ACCGTTTCTTTATGGCAATCTATCTT 59.171 34.615 0.00 0.00 0.00 2.40
4165 4839 6.357367 ACCGTTTCTTTATGGCAATCTATCT 58.643 36.000 0.00 0.00 0.00 1.98
4166 4840 6.260050 TGACCGTTTCTTTATGGCAATCTATC 59.740 38.462 0.00 0.00 0.00 2.08
4167 4841 6.119536 TGACCGTTTCTTTATGGCAATCTAT 58.880 36.000 0.00 0.00 0.00 1.98
4168 4842 5.492895 TGACCGTTTCTTTATGGCAATCTA 58.507 37.500 0.00 0.00 0.00 1.98
4169 4843 4.331968 TGACCGTTTCTTTATGGCAATCT 58.668 39.130 0.00 0.00 0.00 2.40
4170 4844 4.156008 ACTGACCGTTTCTTTATGGCAATC 59.844 41.667 0.00 0.00 0.00 2.67
4171 4845 4.079253 ACTGACCGTTTCTTTATGGCAAT 58.921 39.130 0.00 0.00 0.00 3.56
4172 4846 3.252215 CACTGACCGTTTCTTTATGGCAA 59.748 43.478 0.00 0.00 0.00 4.52
4173 4847 2.811431 CACTGACCGTTTCTTTATGGCA 59.189 45.455 0.00 0.00 0.00 4.92
4174 4848 2.812011 ACACTGACCGTTTCTTTATGGC 59.188 45.455 0.00 0.00 0.00 4.40
4175 4849 4.062293 TGACACTGACCGTTTCTTTATGG 58.938 43.478 0.00 0.00 0.00 2.74
4176 4850 5.236478 AGTTGACACTGACCGTTTCTTTATG 59.764 40.000 0.00 0.00 0.00 1.90
4177 4851 5.365619 AGTTGACACTGACCGTTTCTTTAT 58.634 37.500 0.00 0.00 0.00 1.40
4178 4852 4.761975 AGTTGACACTGACCGTTTCTTTA 58.238 39.130 0.00 0.00 0.00 1.85
4179 4853 3.606687 AGTTGACACTGACCGTTTCTTT 58.393 40.909 0.00 0.00 0.00 2.52
4180 4854 3.261981 AGTTGACACTGACCGTTTCTT 57.738 42.857 0.00 0.00 0.00 2.52
4181 4855 2.981859 AGTTGACACTGACCGTTTCT 57.018 45.000 0.00 0.00 0.00 2.52
4182 4856 3.486875 CCAAAGTTGACACTGACCGTTTC 60.487 47.826 0.00 0.00 31.60 2.78
4183 4857 2.422127 CCAAAGTTGACACTGACCGTTT 59.578 45.455 0.00 0.00 31.60 3.60
4184 4858 2.014128 CCAAAGTTGACACTGACCGTT 58.986 47.619 0.00 0.00 31.60 4.44
4185 4859 1.065709 ACCAAAGTTGACACTGACCGT 60.066 47.619 0.00 0.00 31.60 4.83
4186 4860 1.330521 CACCAAAGTTGACACTGACCG 59.669 52.381 0.00 0.00 31.60 4.79
4187 4861 2.639065 TCACCAAAGTTGACACTGACC 58.361 47.619 0.00 0.00 31.60 4.02
4188 4862 3.627577 ACATCACCAAAGTTGACACTGAC 59.372 43.478 0.00 0.00 31.60 3.51
4189 4863 3.627123 CACATCACCAAAGTTGACACTGA 59.373 43.478 0.00 0.00 31.60 3.41
4190 4864 3.243168 CCACATCACCAAAGTTGACACTG 60.243 47.826 0.00 0.00 31.60 3.66
4191 4865 2.951642 CCACATCACCAAAGTTGACACT 59.048 45.455 0.00 0.00 33.11 3.55
4192 4866 2.543653 GCCACATCACCAAAGTTGACAC 60.544 50.000 0.00 0.00 0.00 3.67
4193 4867 1.680735 GCCACATCACCAAAGTTGACA 59.319 47.619 0.00 0.00 0.00 3.58
4194 4868 1.956477 AGCCACATCACCAAAGTTGAC 59.044 47.619 0.00 0.00 0.00 3.18
4195 4869 2.229792 GAGCCACATCACCAAAGTTGA 58.770 47.619 0.00 0.00 0.00 3.18
4196 4870 1.955778 TGAGCCACATCACCAAAGTTG 59.044 47.619 0.00 0.00 0.00 3.16
4197 4871 2.363306 TGAGCCACATCACCAAAGTT 57.637 45.000 0.00 0.00 0.00 2.66
4198 4872 2.165167 CATGAGCCACATCACCAAAGT 58.835 47.619 0.00 0.00 37.07 2.66
4199 4873 2.439409 TCATGAGCCACATCACCAAAG 58.561 47.619 0.00 0.00 37.07 2.77
4200 4874 2.583024 TCATGAGCCACATCACCAAA 57.417 45.000 0.00 0.00 37.07 3.28
4201 4875 2.583024 TTCATGAGCCACATCACCAA 57.417 45.000 0.00 0.00 37.07 3.67
4202 4876 2.812836 ATTCATGAGCCACATCACCA 57.187 45.000 0.00 0.00 37.07 4.17
4203 4877 5.581126 TTAAATTCATGAGCCACATCACC 57.419 39.130 0.00 0.00 37.07 4.02
4204 4878 7.977853 AGAAATTAAATTCATGAGCCACATCAC 59.022 33.333 6.07 0.00 37.07 3.06
4205 4879 7.977293 CAGAAATTAAATTCATGAGCCACATCA 59.023 33.333 6.07 0.00 37.07 3.07
4206 4880 7.977853 ACAGAAATTAAATTCATGAGCCACATC 59.022 33.333 6.07 0.00 37.07 3.06
4207 4881 7.844009 ACAGAAATTAAATTCATGAGCCACAT 58.156 30.769 6.07 0.00 40.17 3.21
4208 4882 7.230849 ACAGAAATTAAATTCATGAGCCACA 57.769 32.000 6.07 0.00 0.00 4.17
4209 4883 9.294030 CTTACAGAAATTAAATTCATGAGCCAC 57.706 33.333 6.07 0.00 0.00 5.01
4210 4884 9.023962 ACTTACAGAAATTAAATTCATGAGCCA 57.976 29.630 6.07 0.00 0.00 4.75
4211 4885 9.860898 AACTTACAGAAATTAAATTCATGAGCC 57.139 29.630 6.07 0.00 0.00 4.70
4224 4898 9.106070 AGTTTGTCTACGAAACTTACAGAAATT 57.894 29.630 0.00 0.00 40.04 1.82
4225 4899 8.658499 AGTTTGTCTACGAAACTTACAGAAAT 57.342 30.769 0.00 0.00 40.04 2.17
4226 4900 7.760794 TGAGTTTGTCTACGAAACTTACAGAAA 59.239 33.333 0.00 0.00 42.42 2.52
4227 4901 7.259882 TGAGTTTGTCTACGAAACTTACAGAA 58.740 34.615 0.00 0.00 42.42 3.02
4228 4902 6.798482 TGAGTTTGTCTACGAAACTTACAGA 58.202 36.000 0.00 0.00 42.42 3.41
4229 4903 7.639162 ATGAGTTTGTCTACGAAACTTACAG 57.361 36.000 0.00 0.00 42.42 2.74
4230 4904 9.701098 ATTATGAGTTTGTCTACGAAACTTACA 57.299 29.630 0.00 0.00 42.42 2.41
4265 4939 9.004231 AGACCAATAATTTCATCCTTACTAGGT 57.996 33.333 0.00 0.00 42.60 3.08
4266 4940 9.853177 AAGACCAATAATTTCATCCTTACTAGG 57.147 33.333 0.00 0.00 43.46 3.02
4268 4942 9.120538 GCAAGACCAATAATTTCATCCTTACTA 57.879 33.333 0.00 0.00 0.00 1.82
4269 4943 7.836183 AGCAAGACCAATAATTTCATCCTTACT 59.164 33.333 0.00 0.00 0.00 2.24
4270 4944 8.000780 AGCAAGACCAATAATTTCATCCTTAC 57.999 34.615 0.00 0.00 0.00 2.34
4271 4945 8.593945 AAGCAAGACCAATAATTTCATCCTTA 57.406 30.769 0.00 0.00 0.00 2.69
4272 4946 7.398332 AGAAGCAAGACCAATAATTTCATCCTT 59.602 33.333 0.00 0.00 0.00 3.36
4273 4947 6.894103 AGAAGCAAGACCAATAATTTCATCCT 59.106 34.615 0.00 0.00 0.00 3.24
4274 4948 7.105241 AGAAGCAAGACCAATAATTTCATCC 57.895 36.000 0.00 0.00 0.00 3.51
4277 4951 9.023962 ACAATAGAAGCAAGACCAATAATTTCA 57.976 29.630 0.00 0.00 0.00 2.69
4278 4952 9.508567 GACAATAGAAGCAAGACCAATAATTTC 57.491 33.333 0.00 0.00 0.00 2.17
4279 4953 8.184192 CGACAATAGAAGCAAGACCAATAATTT 58.816 33.333 0.00 0.00 0.00 1.82
4280 4954 7.336931 ACGACAATAGAAGCAAGACCAATAATT 59.663 33.333 0.00 0.00 0.00 1.40
4281 4955 6.823689 ACGACAATAGAAGCAAGACCAATAAT 59.176 34.615 0.00 0.00 0.00 1.28
4282 4956 6.170506 ACGACAATAGAAGCAAGACCAATAA 58.829 36.000 0.00 0.00 0.00 1.40
4283 4957 5.730550 ACGACAATAGAAGCAAGACCAATA 58.269 37.500 0.00 0.00 0.00 1.90
4284 4958 4.579869 ACGACAATAGAAGCAAGACCAAT 58.420 39.130 0.00 0.00 0.00 3.16
4285 4959 4.002906 ACGACAATAGAAGCAAGACCAA 57.997 40.909 0.00 0.00 0.00 3.67
4286 4960 3.678056 ACGACAATAGAAGCAAGACCA 57.322 42.857 0.00 0.00 0.00 4.02
4287 4961 3.864003 GGTACGACAATAGAAGCAAGACC 59.136 47.826 0.00 0.00 0.00 3.85
4288 4962 4.745649 AGGTACGACAATAGAAGCAAGAC 58.254 43.478 0.00 0.00 0.00 3.01
4289 4963 4.142227 GGAGGTACGACAATAGAAGCAAGA 60.142 45.833 0.00 0.00 0.00 3.02
4290 4964 4.113354 GGAGGTACGACAATAGAAGCAAG 58.887 47.826 0.00 0.00 0.00 4.01
4291 4965 3.767673 AGGAGGTACGACAATAGAAGCAA 59.232 43.478 0.00 0.00 0.00 3.91
4292 4966 3.362706 AGGAGGTACGACAATAGAAGCA 58.637 45.455 0.00 0.00 0.00 3.91
4293 4967 5.708877 ATAGGAGGTACGACAATAGAAGC 57.291 43.478 0.00 0.00 0.00 3.86
4294 4968 8.795842 ATCTATAGGAGGTACGACAATAGAAG 57.204 38.462 0.00 0.00 30.64 2.85
4295 4969 7.828223 GGATCTATAGGAGGTACGACAATAGAA 59.172 40.741 0.00 3.22 30.64 2.10
4296 4970 7.037802 TGGATCTATAGGAGGTACGACAATAGA 60.038 40.741 0.00 11.04 0.00 1.98
4297 4971 7.066043 GTGGATCTATAGGAGGTACGACAATAG 59.934 44.444 0.00 0.00 0.00 1.73
4298 4972 6.883217 GTGGATCTATAGGAGGTACGACAATA 59.117 42.308 0.00 0.00 0.00 1.90
4299 4973 5.711036 GTGGATCTATAGGAGGTACGACAAT 59.289 44.000 0.00 0.00 0.00 2.71
4300 4974 5.068636 GTGGATCTATAGGAGGTACGACAA 58.931 45.833 0.00 0.00 0.00 3.18
4301 4975 4.649692 GTGGATCTATAGGAGGTACGACA 58.350 47.826 0.00 0.00 0.00 4.35
4302 4976 3.683822 CGTGGATCTATAGGAGGTACGAC 59.316 52.174 0.00 0.00 32.75 4.34
4303 4977 3.326006 ACGTGGATCTATAGGAGGTACGA 59.674 47.826 17.66 0.00 34.09 3.43
4304 4978 3.672808 ACGTGGATCTATAGGAGGTACG 58.327 50.000 0.00 7.69 35.17 3.67
4305 4979 5.769162 AGAAACGTGGATCTATAGGAGGTAC 59.231 44.000 0.00 0.00 0.00 3.34
4306 4980 5.950023 AGAAACGTGGATCTATAGGAGGTA 58.050 41.667 0.00 0.00 0.00 3.08
4307 4981 4.805744 AGAAACGTGGATCTATAGGAGGT 58.194 43.478 0.00 0.00 0.00 3.85
4308 4982 5.793030 AAGAAACGTGGATCTATAGGAGG 57.207 43.478 0.00 0.00 0.00 4.30
4309 4983 6.697892 GTCAAAGAAACGTGGATCTATAGGAG 59.302 42.308 0.00 0.00 0.00 3.69
4310 4984 6.406624 GGTCAAAGAAACGTGGATCTATAGGA 60.407 42.308 0.00 0.00 0.00 2.94
4311 4985 5.753921 GGTCAAAGAAACGTGGATCTATAGG 59.246 44.000 0.00 0.00 0.00 2.57
4312 4986 6.574350 AGGTCAAAGAAACGTGGATCTATAG 58.426 40.000 0.00 0.00 0.00 1.31
4313 4987 6.540438 AGGTCAAAGAAACGTGGATCTATA 57.460 37.500 0.00 0.00 0.00 1.31
4314 4988 5.422214 AGGTCAAAGAAACGTGGATCTAT 57.578 39.130 0.00 0.00 0.00 1.98
4315 4989 4.884668 AGGTCAAAGAAACGTGGATCTA 57.115 40.909 0.00 0.00 0.00 1.98
4316 4990 3.771577 AGGTCAAAGAAACGTGGATCT 57.228 42.857 0.00 0.00 0.00 2.75
4317 4991 3.188667 GGAAGGTCAAAGAAACGTGGATC 59.811 47.826 0.00 0.00 0.00 3.36
4318 4992 3.146847 GGAAGGTCAAAGAAACGTGGAT 58.853 45.455 0.00 0.00 0.00 3.41
4319 4993 2.567985 GGAAGGTCAAAGAAACGTGGA 58.432 47.619 0.00 0.00 0.00 4.02
4320 4994 1.607148 GGGAAGGTCAAAGAAACGTGG 59.393 52.381 0.00 0.00 0.00 4.94
4321 4995 2.572290 AGGGAAGGTCAAAGAAACGTG 58.428 47.619 0.00 0.00 0.00 4.49
4322 4996 3.292492 AAGGGAAGGTCAAAGAAACGT 57.708 42.857 0.00 0.00 0.00 3.99
4323 4997 3.380320 ACAAAGGGAAGGTCAAAGAAACG 59.620 43.478 0.00 0.00 0.00 3.60
4339 5013 4.853924 ATAGCAACAAGGTGAACAAAGG 57.146 40.909 0.00 0.00 0.00 3.11
4342 5016 6.214191 TCAAAATAGCAACAAGGTGAACAA 57.786 33.333 0.00 0.00 0.00 2.83
4347 5021 6.183360 GCATGATTCAAAATAGCAACAAGGTG 60.183 38.462 0.00 0.00 0.00 4.00
4359 5033 2.674747 GCCGGTGTGCATGATTCAAAAT 60.675 45.455 1.90 0.00 0.00 1.82
4399 5074 4.614475 AGTCATGTAGGAGAGGACATTGA 58.386 43.478 0.00 0.00 34.01 2.57
4426 5101 2.622064 ACTGTGAAGGCGAAAAGACT 57.378 45.000 0.00 0.00 42.73 3.24
4435 5110 0.317479 ACGGACACTACTGTGAAGGC 59.683 55.000 3.03 0.00 46.55 4.35
4464 5139 3.499338 TCATCTTGCCCTTGTGTTTGAT 58.501 40.909 0.00 0.00 0.00 2.57
4467 5142 3.152341 CTCTCATCTTGCCCTTGTGTTT 58.848 45.455 0.00 0.00 0.00 2.83
4489 5165 3.500448 TGAGTGGGTGTTAAAGCATCA 57.500 42.857 0.00 0.00 0.00 3.07
4531 5207 4.442706 CAAGTATGGGCACTACTCGAATT 58.557 43.478 0.00 0.00 0.00 2.17
4532 5208 3.181465 CCAAGTATGGGCACTACTCGAAT 60.181 47.826 0.00 0.00 43.51 3.34
4564 5240 7.147355 TGGAGTCTACTACACCACTATCTATGT 60.147 40.741 0.00 0.00 43.09 2.29
4629 5312 8.753497 ATGATGATGTCTAGTACTTGTGAGTA 57.247 34.615 0.00 0.00 37.33 2.59
4630 5313 7.652524 ATGATGATGTCTAGTACTTGTGAGT 57.347 36.000 0.00 0.00 39.97 3.41
4636 5319 9.698309 CCGAAATAATGATGATGTCTAGTACTT 57.302 33.333 0.00 0.00 0.00 2.24
4637 5320 8.307483 CCCGAAATAATGATGATGTCTAGTACT 58.693 37.037 0.00 0.00 0.00 2.73
4638 5321 7.545965 CCCCGAAATAATGATGATGTCTAGTAC 59.454 40.741 0.00 0.00 0.00 2.73
4639 5322 7.310423 CCCCCGAAATAATGATGATGTCTAGTA 60.310 40.741 0.00 0.00 0.00 1.82
4640 5323 6.467677 CCCCGAAATAATGATGATGTCTAGT 58.532 40.000 0.00 0.00 0.00 2.57
4641 5324 5.877012 CCCCCGAAATAATGATGATGTCTAG 59.123 44.000 0.00 0.00 0.00 2.43
4642 5325 5.309543 ACCCCCGAAATAATGATGATGTCTA 59.690 40.000 0.00 0.00 0.00 2.59
4643 5326 4.104738 ACCCCCGAAATAATGATGATGTCT 59.895 41.667 0.00 0.00 0.00 3.41
4644 5327 4.398319 ACCCCCGAAATAATGATGATGTC 58.602 43.478 0.00 0.00 0.00 3.06
4645 5328 4.453480 ACCCCCGAAATAATGATGATGT 57.547 40.909 0.00 0.00 0.00 3.06
4646 5329 5.789643 AAACCCCCGAAATAATGATGATG 57.210 39.130 0.00 0.00 0.00 3.07
4647 5330 5.896678 TCAAAACCCCCGAAATAATGATGAT 59.103 36.000 0.00 0.00 0.00 2.45
4648 5331 5.265191 TCAAAACCCCCGAAATAATGATGA 58.735 37.500 0.00 0.00 0.00 2.92
4649 5332 5.590530 TCAAAACCCCCGAAATAATGATG 57.409 39.130 0.00 0.00 0.00 3.07
4731 5442 7.436673 CAGTTCAAGACTATTCTTATCCCTTCG 59.563 40.741 0.00 0.00 40.34 3.79
4732 5443 8.478877 TCAGTTCAAGACTATTCTTATCCCTTC 58.521 37.037 0.00 0.00 40.34 3.46
4750 5466 9.791820 CATCAATTAATAGCACAATCAGTTCAA 57.208 29.630 0.00 0.00 0.00 2.69
4767 5484 7.994911 AGTCTTATCATGAGGTGCATCAATTAA 59.005 33.333 0.00 0.00 34.15 1.40
4769 5486 6.262496 CAGTCTTATCATGAGGTGCATCAATT 59.738 38.462 0.00 0.00 34.15 2.32
4772 5489 4.700700 CAGTCTTATCATGAGGTGCATCA 58.299 43.478 0.00 0.00 34.15 3.07
4777 5496 5.268118 TGTAGCAGTCTTATCATGAGGTG 57.732 43.478 0.09 0.00 0.00 4.00
4782 5501 9.926751 CTTTATTGTTGTAGCAGTCTTATCATG 57.073 33.333 0.00 0.00 0.00 3.07
4841 5560 0.397816 ACTAGGAGATCCCAAGCGCT 60.398 55.000 2.64 2.64 37.41 5.92
4932 5651 3.114693 GTACAAGTGTACTCGTCGAGG 57.885 52.381 25.25 8.80 45.47 4.63
4972 5691 0.685097 AATACGGGCACGGATAGCAT 59.315 50.000 15.46 0.00 44.54 3.79
4975 5694 2.035449 TCTGAAATACGGGCACGGATAG 59.965 50.000 15.46 3.98 44.54 2.08
4978 5697 0.609151 TTCTGAAATACGGGCACGGA 59.391 50.000 15.46 3.28 46.48 4.69
4981 5700 2.093658 TCCTCTTCTGAAATACGGGCAC 60.094 50.000 0.00 0.00 0.00 5.01
5029 5748 3.695060 ACGACGTACCTCATCTTCAATCT 59.305 43.478 0.00 0.00 0.00 2.40
5088 5807 3.283684 CTTGCCAACCGAACCGCA 61.284 61.111 0.00 0.00 0.00 5.69
5093 5812 1.901464 GGAAGCCTTGCCAACCGAA 60.901 57.895 0.00 0.00 0.00 4.30
5096 5815 0.467804 TTTTGGAAGCCTTGCCAACC 59.532 50.000 7.57 0.00 43.40 3.77
5098 5817 0.467804 GGTTTTGGAAGCCTTGCCAA 59.532 50.000 4.80 4.80 42.11 4.52
5116 5835 1.831286 GGGCCTGATTGCTGATGGG 60.831 63.158 0.84 0.00 0.00 4.00
5170 5889 4.807834 CGAGTATTGACAGCAATCAGACAT 59.192 41.667 0.00 0.00 43.43 3.06
5183 5902 3.003482 ACCGAGTGCTATCGAGTATTGAC 59.997 47.826 11.91 0.00 45.56 3.18
5186 5905 4.132336 TGTACCGAGTGCTATCGAGTATT 58.868 43.478 11.91 0.00 45.56 1.89
5203 5922 5.281727 CCTTTTCTCTGCTGTTTTTGTACC 58.718 41.667 0.00 0.00 0.00 3.34
5215 5934 7.976175 CCTTAAATAAATGACCCTTTTCTCTGC 59.024 37.037 0.00 0.00 0.00 4.26
5216 5935 8.470002 CCCTTAAATAAATGACCCTTTTCTCTG 58.530 37.037 0.00 0.00 0.00 3.35
5246 5965 0.802494 CGGTCGGTTGAAGGGAATTG 59.198 55.000 0.00 0.00 0.00 2.32
5247 5966 0.688487 TCGGTCGGTTGAAGGGAATT 59.312 50.000 0.00 0.00 0.00 2.17
5249 5968 0.248289 GATCGGTCGGTTGAAGGGAA 59.752 55.000 0.00 0.00 0.00 3.97
5261 5980 2.100584 AGATGCTCTCACAAGATCGGTC 59.899 50.000 0.00 0.00 0.00 4.79
5264 5983 3.295785 CGTAGATGCTCTCACAAGATCG 58.704 50.000 0.00 0.00 0.00 3.69
5283 6002 1.040893 TATGACGGACATGGAGGCGT 61.041 55.000 3.21 0.00 39.77 5.68
5301 6021 6.262496 CCTGACCGTATGATTAAGAGACTGTA 59.738 42.308 0.00 0.00 0.00 2.74
5303 6023 5.508153 CCCTGACCGTATGATTAAGAGACTG 60.508 48.000 0.00 0.00 0.00 3.51
5305 6025 4.262079 CCCCTGACCGTATGATTAAGAGAC 60.262 50.000 0.00 0.00 0.00 3.36
5306 6026 3.895656 CCCCTGACCGTATGATTAAGAGA 59.104 47.826 0.00 0.00 0.00 3.10
5329 6049 1.995626 ATGGACTCGGAGGGGTTGG 60.996 63.158 10.23 0.00 0.00 3.77
5339 6059 1.462283 CAGTTGCAGAACATGGACTCG 59.538 52.381 0.00 0.00 34.17 4.18
5347 6067 1.955778 CAATGGACCAGTTGCAGAACA 59.044 47.619 0.00 0.00 34.17 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.