Multiple sequence alignment - TraesCS1D01G407300

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G407300 chr1D 100.000 4525 0 0 1 4525 470409039 470413563 0.000000e+00 8357.0
1 TraesCS1D01G407300 chr1D 99.506 405 2 0 4008 4412 392820970 392820566 0.000000e+00 737.0
2 TraesCS1D01G407300 chr1D 90.164 122 12 0 1 122 14632378 14632499 4.690000e-35 159.0
3 TraesCS1D01G407300 chr1D 97.183 71 2 0 436 506 305224618 305224688 2.210000e-23 121.0
4 TraesCS1D01G407300 chr1D 97.778 45 1 0 3874 3918 47024813 47024769 1.350000e-10 78.7
5 TraesCS1D01G407300 chr1D 97.778 45 1 0 3874 3918 49171422 49171378 1.350000e-10 78.7
6 TraesCS1D01G407300 chr1B 90.926 3185 203 44 1389 4525 653046053 653049199 0.000000e+00 4202.0
7 TraesCS1D01G407300 chr1B 88.668 653 22 22 750 1390 653045367 653045979 0.000000e+00 749.0
8 TraesCS1D01G407300 chr1B 97.368 152 4 0 977 1128 684903801 684903650 4.490000e-65 259.0
9 TraesCS1D01G407300 chr1B 90.678 118 11 0 3 120 451326676 451326793 1.690000e-34 158.0
10 TraesCS1D01G407300 chr1A 92.962 1634 101 7 2152 3779 564086125 564087750 0.000000e+00 2368.0
11 TraesCS1D01G407300 chr1A 94.817 328 17 0 3778 4105 564087813 564088140 3.120000e-141 512.0
12 TraesCS1D01G407300 chr1A 80.408 735 70 27 1388 2089 564085420 564086113 4.070000e-135 492.0
13 TraesCS1D01G407300 chr1A 91.791 268 8 3 866 1119 564084593 564084860 1.200000e-95 361.0
14 TraesCS1D01G407300 chr1A 90.678 118 11 0 3 120 239496839 239496722 1.690000e-34 158.0
15 TraesCS1D01G407300 chr1A 90.678 118 11 0 3 120 295312834 295312717 1.690000e-34 158.0
16 TraesCS1D01G407300 chr5D 98.604 573 8 0 3840 4412 503906109 503906681 0.000000e+00 1014.0
17 TraesCS1D01G407300 chr5D 99.506 405 2 0 4008 4412 74862182 74861778 0.000000e+00 737.0
18 TraesCS1D01G407300 chr5D 78.049 574 91 16 2823 3383 428436067 428436618 3.370000e-86 329.0
19 TraesCS1D01G407300 chr5D 77.672 524 82 22 2823 3333 25469835 25470336 2.060000e-73 287.0
20 TraesCS1D01G407300 chr5D 100.000 45 0 0 3874 3918 74862266 74862222 2.900000e-12 84.2
21 TraesCS1D01G407300 chr5D 100.000 33 0 0 253 285 464129770 464129802 1.360000e-05 62.1
22 TraesCS1D01G407300 chr3D 99.753 405 1 0 4008 4412 525208776 525208372 0.000000e+00 743.0
23 TraesCS1D01G407300 chr3D 97.297 74 2 0 433 506 4973366 4973439 4.750000e-25 126.0
24 TraesCS1D01G407300 chr3D 97.183 71 2 0 436 506 551629576 551629646 2.210000e-23 121.0
25 TraesCS1D01G407300 chr2D 99.753 405 1 0 4008 4412 380986799 380986395 0.000000e+00 743.0
26 TraesCS1D01G407300 chr2D 99.753 405 1 0 4008 4412 393343500 393343096 0.000000e+00 743.0
27 TraesCS1D01G407300 chr2D 88.976 127 13 1 3 129 376861408 376861283 6.060000e-34 156.0
28 TraesCS1D01G407300 chr6D 99.506 405 2 0 4008 4412 25071997 25071593 0.000000e+00 737.0
29 TraesCS1D01G407300 chr6D 99.506 405 2 0 4008 4412 40663293 40662889 0.000000e+00 737.0
30 TraesCS1D01G407300 chr6D 97.778 45 1 0 3874 3918 19765151 19765195 1.350000e-10 78.7
31 TraesCS1D01G407300 chr6D 97.778 45 1 0 3874 3918 40663377 40663333 1.350000e-10 78.7
32 TraesCS1D01G407300 chr6D 97.778 45 1 0 3874 3918 250864307 250864263 1.350000e-10 78.7
33 TraesCS1D01G407300 chr6A 78.049 574 91 21 2826 3386 17019458 17018907 3.370000e-86 329.0
34 TraesCS1D01G407300 chr6A 93.925 214 11 2 977 1189 409919862 409920074 5.650000e-84 322.0
35 TraesCS1D01G407300 chr7A 95.025 201 9 1 977 1177 641530216 641530017 9.450000e-82 315.0
36 TraesCS1D01G407300 chr7A 95.025 201 9 1 977 1177 646921710 646921511 9.450000e-82 315.0
37 TraesCS1D01G407300 chr7A 78.056 319 56 8 3080 3386 728284907 728284591 5.980000e-44 189.0
38 TraesCS1D01G407300 chr7A 78.182 275 49 8 3083 3348 728286371 728286099 1.010000e-36 165.0
39 TraesCS1D01G407300 chr7A 90.083 121 12 0 3 123 523271011 523270891 1.690000e-34 158.0
40 TraesCS1D01G407300 chr3B 77.720 579 84 31 2826 3386 743116320 743115769 3.400000e-81 313.0
41 TraesCS1D01G407300 chr3B 86.250 80 7 3 284 361 59180859 59180936 2.900000e-12 84.2
42 TraesCS1D01G407300 chr3A 92.523 214 13 3 977 1189 19078016 19077805 2.050000e-78 303.0
43 TraesCS1D01G407300 chr3A 88.889 126 13 1 3 128 562879601 562879725 2.180000e-33 154.0
44 TraesCS1D01G407300 chr4A 96.711 152 5 0 977 1128 66162377 66162528 2.090000e-63 254.0
45 TraesCS1D01G407300 chr4B 96.053 152 6 0 977 1128 19064342 19064191 9.720000e-62 248.0
46 TraesCS1D01G407300 chr4B 88.550 131 11 4 1 128 223149602 223149731 6.060000e-34 156.0
47 TraesCS1D01G407300 chr4B 97.101 69 2 0 436 504 343592944 343593012 2.860000e-22 117.0
48 TraesCS1D01G407300 chr5A 94.194 155 8 1 1036 1189 579649931 579649777 7.570000e-58 235.0
49 TraesCS1D01G407300 chr5A 97.222 72 2 0 434 505 46367386 46367457 6.150000e-24 122.0
50 TraesCS1D01G407300 chr5A 93.671 79 4 1 4438 4516 564599471 564599394 2.860000e-22 117.0
51 TraesCS1D01G407300 chr2A 90.833 120 10 1 1 120 389221053 389221171 4.690000e-35 159.0
52 TraesCS1D01G407300 chr4D 93.182 88 1 3 436 523 465072472 465072390 1.710000e-24 124.0
53 TraesCS1D01G407300 chr7B 97.143 70 2 0 435 504 281946377 281946446 7.950000e-23 119.0
54 TraesCS1D01G407300 chr7B 92.045 88 2 3 436 523 600565363 600565281 7.950000e-23 119.0
55 TraesCS1D01G407300 chr7B 95.000 40 1 1 308 347 218815287 218815249 1.360000e-05 62.1
56 TraesCS1D01G407300 chr7D 95.775 71 3 0 436 506 25036263 25036333 1.030000e-21 115.0
57 TraesCS1D01G407300 chr5B 92.500 40 2 1 308 347 660592568 660592606 6.320000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G407300 chr1D 470409039 470413563 4524 False 8357.00 8357 100.0000 1 4525 1 chr1D.!!$F3 4524
1 TraesCS1D01G407300 chr1B 653045367 653049199 3832 False 2475.50 4202 89.7970 750 4525 2 chr1B.!!$F2 3775
2 TraesCS1D01G407300 chr1A 564084593 564088140 3547 False 933.25 2368 89.9945 866 4105 4 chr1A.!!$F1 3239
3 TraesCS1D01G407300 chr5D 503906109 503906681 572 False 1014.00 1014 98.6040 3840 4412 1 chr5D.!!$F4 572
4 TraesCS1D01G407300 chr5D 428436067 428436618 551 False 329.00 329 78.0490 2823 3383 1 chr5D.!!$F2 560
5 TraesCS1D01G407300 chr5D 25469835 25470336 501 False 287.00 287 77.6720 2823 3333 1 chr5D.!!$F1 510
6 TraesCS1D01G407300 chr6A 17018907 17019458 551 True 329.00 329 78.0490 2826 3386 1 chr6A.!!$R1 560
7 TraesCS1D01G407300 chr3B 743115769 743116320 551 True 313.00 313 77.7200 2826 3386 1 chr3B.!!$R1 560

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
513 514 0.029567 GTGCTATAGCGTCTCGTGCT 59.970 55.0 19.55 0.0 45.83 4.40 F
756 757 0.033228 CTGCATCTGTCCGATCCCTC 59.967 60.0 0.00 0.0 0.00 4.30 F
1463 1786 0.164647 CACTCGCCTTTTTCTGCTCG 59.835 55.0 0.00 0.0 0.00 5.03 F
1675 2011 0.456221 AGAGCGGACTGTTACATCGG 59.544 55.0 0.00 0.0 0.00 4.18 F
2204 2570 0.721718 GCGTCCAAGGTTCTTCATCG 59.278 55.0 0.00 0.0 0.00 3.84 F
2256 2622 1.530013 GCATCACCCACTGCAGCTTT 61.530 55.0 15.27 0.0 38.28 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1368 1613 0.376502 GATTTGCAAGAGCTCCTCGC 59.623 55.000 10.93 11.33 42.74 5.03 R
1647 1983 0.445436 CAGTCCGCTCTGCAATTGTC 59.555 55.000 7.40 0.07 0.00 3.18 R
2275 2641 0.737804 GACTGATCTGCGCAGAGAGA 59.262 55.000 37.26 26.49 41.33 3.10 R
3017 3392 1.192428 ACCCGGACACAGATTAGGAC 58.808 55.000 0.73 0.00 0.00 3.85 R
3458 3852 2.882137 GGCCGCAATTATAGCCTGTTTA 59.118 45.455 4.89 0.00 42.34 2.01 R
3604 4001 6.040842 ACATGAAATACAACCAGCAGACTTTT 59.959 34.615 0.00 0.00 0.00 2.27 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 9.740239 ACGTACGAATGTATGTAGACATATTTT 57.260 29.630 24.41 3.44 46.45 1.82
58 59 9.624697 TTTATTGTGTAGATTCACTCATTTTGC 57.375 29.630 0.00 0.00 38.90 3.68
59 60 6.882610 TTGTGTAGATTCACTCATTTTGCT 57.117 33.333 0.00 0.00 38.90 3.91
60 61 6.882610 TGTGTAGATTCACTCATTTTGCTT 57.117 33.333 0.00 0.00 38.90 3.91
61 62 7.275888 TGTGTAGATTCACTCATTTTGCTTT 57.724 32.000 0.00 0.00 38.90 3.51
62 63 7.140705 TGTGTAGATTCACTCATTTTGCTTTG 58.859 34.615 0.00 0.00 38.90 2.77
63 64 7.141363 GTGTAGATTCACTCATTTTGCTTTGT 58.859 34.615 0.00 0.00 35.68 2.83
64 65 8.289618 GTGTAGATTCACTCATTTTGCTTTGTA 58.710 33.333 0.00 0.00 35.68 2.41
65 66 9.013229 TGTAGATTCACTCATTTTGCTTTGTAT 57.987 29.630 0.00 0.00 0.00 2.29
66 67 9.282247 GTAGATTCACTCATTTTGCTTTGTATG 57.718 33.333 0.00 0.00 0.00 2.39
67 68 7.889469 AGATTCACTCATTTTGCTTTGTATGT 58.111 30.769 0.00 0.00 0.00 2.29
68 69 9.013229 AGATTCACTCATTTTGCTTTGTATGTA 57.987 29.630 0.00 0.00 0.00 2.29
69 70 9.624697 GATTCACTCATTTTGCTTTGTATGTAA 57.375 29.630 0.00 0.00 0.00 2.41
71 72 9.624697 TTCACTCATTTTGCTTTGTATGTAATC 57.375 29.630 0.00 0.00 0.00 1.75
72 73 8.791675 TCACTCATTTTGCTTTGTATGTAATCA 58.208 29.630 0.00 0.00 0.00 2.57
73 74 9.577110 CACTCATTTTGCTTTGTATGTAATCAT 57.423 29.630 0.00 0.00 38.00 2.45
80 81 8.531622 TTGCTTTGTATGTAATCATTTGTTGG 57.468 30.769 0.00 0.00 35.70 3.77
81 82 7.890515 TGCTTTGTATGTAATCATTTGTTGGA 58.109 30.769 0.00 0.00 35.70 3.53
82 83 8.363390 TGCTTTGTATGTAATCATTTGTTGGAA 58.637 29.630 0.00 0.00 35.70 3.53
83 84 9.369904 GCTTTGTATGTAATCATTTGTTGGAAT 57.630 29.630 0.00 0.00 35.70 3.01
87 88 9.685276 TGTATGTAATCATTTGTTGGAATCTCT 57.315 29.630 0.00 0.00 35.70 3.10
96 97 9.354673 TCATTTGTTGGAATCTCTAAAAAGACT 57.645 29.630 0.00 0.00 0.00 3.24
97 98 9.971922 CATTTGTTGGAATCTCTAAAAAGACTT 57.028 29.630 0.00 0.00 0.00 3.01
100 101 9.621629 TTGTTGGAATCTCTAAAAAGACTTACA 57.378 29.630 0.00 0.00 0.00 2.41
101 102 9.793259 TGTTGGAATCTCTAAAAAGACTTACAT 57.207 29.630 0.00 0.00 0.00 2.29
104 105 9.151471 TGGAATCTCTAAAAAGACTTACATTCG 57.849 33.333 0.00 0.00 0.00 3.34
105 106 8.604890 GGAATCTCTAAAAAGACTTACATTCGG 58.395 37.037 0.00 0.00 0.00 4.30
106 107 8.494016 AATCTCTAAAAAGACTTACATTCGGG 57.506 34.615 0.00 0.00 0.00 5.14
107 108 7.235935 TCTCTAAAAAGACTTACATTCGGGA 57.764 36.000 0.00 0.00 0.00 5.14
108 109 7.673180 TCTCTAAAAAGACTTACATTCGGGAA 58.327 34.615 0.00 0.00 0.00 3.97
109 110 7.601508 TCTCTAAAAAGACTTACATTCGGGAAC 59.398 37.037 0.00 0.00 0.00 3.62
122 123 3.245732 GGGAACGGAGGGGGTATAA 57.754 57.895 0.00 0.00 0.00 0.98
123 124 1.738474 GGGAACGGAGGGGGTATAAT 58.262 55.000 0.00 0.00 0.00 1.28
124 125 2.906568 GGGAACGGAGGGGGTATAATA 58.093 52.381 0.00 0.00 0.00 0.98
125 126 3.250617 GGGAACGGAGGGGGTATAATAA 58.749 50.000 0.00 0.00 0.00 1.40
126 127 3.848377 GGGAACGGAGGGGGTATAATAAT 59.152 47.826 0.00 0.00 0.00 1.28
127 128 5.032170 GGGAACGGAGGGGGTATAATAATA 58.968 45.833 0.00 0.00 0.00 0.98
128 129 5.104776 GGGAACGGAGGGGGTATAATAATAC 60.105 48.000 0.00 0.00 37.78 1.89
129 130 5.394553 GGAACGGAGGGGGTATAATAATACG 60.395 48.000 0.00 0.00 39.16 3.06
130 131 4.677182 ACGGAGGGGGTATAATAATACGT 58.323 43.478 0.00 0.00 39.16 3.57
131 132 5.826643 ACGGAGGGGGTATAATAATACGTA 58.173 41.667 0.00 0.00 39.16 3.57
132 133 5.652452 ACGGAGGGGGTATAATAATACGTAC 59.348 44.000 0.00 0.00 39.16 3.67
133 134 5.888161 CGGAGGGGGTATAATAATACGTACT 59.112 44.000 0.00 0.00 39.16 2.73
134 135 6.038714 CGGAGGGGGTATAATAATACGTACTC 59.961 46.154 0.00 0.00 39.16 2.59
135 136 6.322456 GGAGGGGGTATAATAATACGTACTCC 59.678 46.154 0.00 0.70 40.69 3.85
138 139 7.340122 GGGGTATAATAATACGTACTCCCTC 57.660 44.000 0.00 0.00 39.16 4.30
139 140 6.322456 GGGGTATAATAATACGTACTCCCTCC 59.678 46.154 0.00 0.00 39.16 4.30
140 141 6.322456 GGGTATAATAATACGTACTCCCTCCC 59.678 46.154 0.00 0.29 39.16 4.30
141 142 6.891908 GGTATAATAATACGTACTCCCTCCCA 59.108 42.308 0.00 0.00 39.16 4.37
142 143 7.562821 GGTATAATAATACGTACTCCCTCCCAT 59.437 40.741 0.00 0.00 39.16 4.00
143 144 5.997384 AATAATACGTACTCCCTCCCATC 57.003 43.478 0.00 0.00 0.00 3.51
144 145 2.305858 ATACGTACTCCCTCCCATCC 57.694 55.000 0.00 0.00 0.00 3.51
145 146 0.928505 TACGTACTCCCTCCCATCCA 59.071 55.000 0.00 0.00 0.00 3.41
146 147 0.042131 ACGTACTCCCTCCCATCCAA 59.958 55.000 0.00 0.00 0.00 3.53
147 148 1.200519 CGTACTCCCTCCCATCCAAA 58.799 55.000 0.00 0.00 0.00 3.28
148 149 1.768870 CGTACTCCCTCCCATCCAAAT 59.231 52.381 0.00 0.00 0.00 2.32
149 150 2.172717 CGTACTCCCTCCCATCCAAATT 59.827 50.000 0.00 0.00 0.00 1.82
150 151 3.389983 CGTACTCCCTCCCATCCAAATTA 59.610 47.826 0.00 0.00 0.00 1.40
151 152 4.041691 CGTACTCCCTCCCATCCAAATTAT 59.958 45.833 0.00 0.00 0.00 1.28
152 153 5.456186 CGTACTCCCTCCCATCCAAATTATT 60.456 44.000 0.00 0.00 0.00 1.40
153 154 5.487861 ACTCCCTCCCATCCAAATTATTT 57.512 39.130 0.00 0.00 0.00 1.40
154 155 5.211201 ACTCCCTCCCATCCAAATTATTTG 58.789 41.667 10.46 10.46 40.32 2.32
155 156 5.043432 ACTCCCTCCCATCCAAATTATTTGA 60.043 40.000 18.13 5.89 43.26 2.69
156 157 5.848004 TCCCTCCCATCCAAATTATTTGAA 58.152 37.500 18.13 0.00 43.26 2.69
157 158 6.267635 TCCCTCCCATCCAAATTATTTGAAA 58.732 36.000 18.13 7.13 43.26 2.69
158 159 6.908029 TCCCTCCCATCCAAATTATTTGAAAT 59.092 34.615 18.13 8.95 43.26 2.17
159 160 7.405565 TCCCTCCCATCCAAATTATTTGAAATT 59.594 33.333 18.13 0.00 43.26 1.82
160 161 8.054572 CCCTCCCATCCAAATTATTTGAAATTT 58.945 33.333 18.13 0.00 43.26 1.82
161 162 9.465199 CCTCCCATCCAAATTATTTGAAATTTT 57.535 29.630 18.13 0.00 43.26 1.82
163 164 8.738106 TCCCATCCAAATTATTTGAAATTTTGC 58.262 29.630 18.13 0.00 43.26 3.68
164 165 8.521176 CCCATCCAAATTATTTGAAATTTTGCA 58.479 29.630 18.13 0.00 43.26 4.08
175 176 6.847956 TTGAAATTTTGCATTTGTCTGAGG 57.152 33.333 0.00 0.00 0.00 3.86
176 177 5.916318 TGAAATTTTGCATTTGTCTGAGGT 58.084 33.333 0.00 0.00 0.00 3.85
177 178 5.754406 TGAAATTTTGCATTTGTCTGAGGTG 59.246 36.000 0.00 0.00 0.00 4.00
178 179 5.534207 AATTTTGCATTTGTCTGAGGTGA 57.466 34.783 0.00 0.00 0.00 4.02
179 180 4.998671 TTTTGCATTTGTCTGAGGTGAA 57.001 36.364 0.00 0.00 0.00 3.18
180 181 4.998671 TTTGCATTTGTCTGAGGTGAAA 57.001 36.364 0.00 0.00 0.00 2.69
181 182 3.988379 TGCATTTGTCTGAGGTGAAAC 57.012 42.857 0.00 0.00 0.00 2.78
182 183 3.554934 TGCATTTGTCTGAGGTGAAACT 58.445 40.909 0.00 0.00 36.74 2.66
183 184 3.953612 TGCATTTGTCTGAGGTGAAACTT 59.046 39.130 0.00 0.00 36.74 2.66
184 185 4.036734 TGCATTTGTCTGAGGTGAAACTTC 59.963 41.667 0.00 0.00 44.22 3.01
185 186 4.276926 GCATTTGTCTGAGGTGAAACTTCT 59.723 41.667 0.00 0.00 44.28 2.85
186 187 5.755813 CATTTGTCTGAGGTGAAACTTCTG 58.244 41.667 0.00 0.00 44.28 3.02
187 188 4.487714 TTGTCTGAGGTGAAACTTCTGT 57.512 40.909 0.00 0.00 44.28 3.41
188 189 4.487714 TGTCTGAGGTGAAACTTCTGTT 57.512 40.909 0.00 0.00 44.28 3.16
189 190 5.607939 TGTCTGAGGTGAAACTTCTGTTA 57.392 39.130 0.00 0.00 44.28 2.41
190 191 5.984725 TGTCTGAGGTGAAACTTCTGTTAA 58.015 37.500 0.00 0.00 44.28 2.01
191 192 6.049149 TGTCTGAGGTGAAACTTCTGTTAAG 58.951 40.000 0.00 0.00 44.28 1.85
192 193 6.049790 GTCTGAGGTGAAACTTCTGTTAAGT 58.950 40.000 0.00 0.00 44.28 2.24
193 194 6.201234 GTCTGAGGTGAAACTTCTGTTAAGTC 59.799 42.308 0.00 0.00 44.28 3.01
194 195 6.098409 TCTGAGGTGAAACTTCTGTTAAGTCT 59.902 38.462 0.00 0.00 44.28 3.24
195 196 6.049149 TGAGGTGAAACTTCTGTTAAGTCTG 58.951 40.000 0.00 0.00 44.28 3.51
196 197 6.127168 TGAGGTGAAACTTCTGTTAAGTCTGA 60.127 38.462 0.00 0.00 44.28 3.27
197 198 6.831976 AGGTGAAACTTCTGTTAAGTCTGAT 58.168 36.000 0.00 0.00 34.96 2.90
198 199 6.931840 AGGTGAAACTTCTGTTAAGTCTGATC 59.068 38.462 0.00 0.00 34.96 2.92
199 200 6.706270 GGTGAAACTTCTGTTAAGTCTGATCA 59.294 38.462 0.00 0.00 34.96 2.92
200 201 7.226720 GGTGAAACTTCTGTTAAGTCTGATCAA 59.773 37.037 0.00 0.00 34.96 2.57
201 202 8.778358 GTGAAACTTCTGTTAAGTCTGATCAAT 58.222 33.333 0.00 0.00 34.96 2.57
202 203 9.342308 TGAAACTTCTGTTAAGTCTGATCAATT 57.658 29.630 0.00 0.00 34.96 2.32
203 204 9.818796 GAAACTTCTGTTAAGTCTGATCAATTC 57.181 33.333 0.00 0.00 34.96 2.17
204 205 9.566432 AAACTTCTGTTAAGTCTGATCAATTCT 57.434 29.630 0.00 0.00 34.96 2.40
206 207 9.646427 ACTTCTGTTAAGTCTGATCAATTCTAC 57.354 33.333 0.00 0.00 0.00 2.59
207 208 9.645059 CTTCTGTTAAGTCTGATCAATTCTACA 57.355 33.333 0.00 0.00 0.00 2.74
208 209 9.996554 TTCTGTTAAGTCTGATCAATTCTACAA 57.003 29.630 0.00 0.00 0.00 2.41
209 210 9.996554 TCTGTTAAGTCTGATCAATTCTACAAA 57.003 29.630 0.00 0.00 0.00 2.83
211 212 9.554395 TGTTAAGTCTGATCAATTCTACAAACA 57.446 29.630 0.00 5.29 0.00 2.83
224 225 9.722056 CAATTCTACAAACAAATATGCTACTCC 57.278 33.333 0.00 0.00 0.00 3.85
225 226 7.859325 TTCTACAAACAAATATGCTACTCCC 57.141 36.000 0.00 0.00 0.00 4.30
226 227 7.195374 TCTACAAACAAATATGCTACTCCCT 57.805 36.000 0.00 0.00 0.00 4.20
227 228 7.630082 TCTACAAACAAATATGCTACTCCCTT 58.370 34.615 0.00 0.00 0.00 3.95
228 229 8.107095 TCTACAAACAAATATGCTACTCCCTTT 58.893 33.333 0.00 0.00 0.00 3.11
229 230 6.924111 ACAAACAAATATGCTACTCCCTTTG 58.076 36.000 0.00 0.00 0.00 2.77
230 231 6.493458 ACAAACAAATATGCTACTCCCTTTGT 59.507 34.615 0.00 0.00 38.17 2.83
231 232 7.668052 ACAAACAAATATGCTACTCCCTTTGTA 59.332 33.333 0.00 0.00 36.20 2.41
232 233 8.519526 CAAACAAATATGCTACTCCCTTTGTAA 58.480 33.333 0.00 0.00 36.20 2.41
233 234 8.644374 AACAAATATGCTACTCCCTTTGTAAA 57.356 30.769 0.00 0.00 36.20 2.01
234 235 8.281212 ACAAATATGCTACTCCCTTTGTAAAG 57.719 34.615 0.00 0.00 35.66 1.85
235 236 7.888546 ACAAATATGCTACTCCCTTTGTAAAGT 59.111 33.333 3.90 0.00 35.66 2.66
236 237 9.391006 CAAATATGCTACTCCCTTTGTAAAGTA 57.609 33.333 3.90 0.00 34.20 2.24
237 238 9.969001 AAATATGCTACTCCCTTTGTAAAGTAA 57.031 29.630 3.90 0.00 34.20 2.24
238 239 8.959705 ATATGCTACTCCCTTTGTAAAGTAAC 57.040 34.615 3.90 0.00 34.20 2.50
239 240 6.429521 TGCTACTCCCTTTGTAAAGTAACT 57.570 37.500 3.90 0.00 34.20 2.24
240 241 7.543359 TGCTACTCCCTTTGTAAAGTAACTA 57.457 36.000 3.90 0.00 34.20 2.24
241 242 7.965718 TGCTACTCCCTTTGTAAAGTAACTAA 58.034 34.615 3.90 0.00 34.20 2.24
242 243 8.431222 TGCTACTCCCTTTGTAAAGTAACTAAA 58.569 33.333 3.90 0.00 34.20 1.85
243 244 9.276590 GCTACTCCCTTTGTAAAGTAACTAAAA 57.723 33.333 3.90 0.00 34.20 1.52
279 280 8.928270 AAACGTCTTATATTAGTTCACAGAGG 57.072 34.615 0.00 0.00 0.00 3.69
280 281 7.642082 ACGTCTTATATTAGTTCACAGAGGT 57.358 36.000 0.00 0.00 0.00 3.85
281 282 8.743085 ACGTCTTATATTAGTTCACAGAGGTA 57.257 34.615 0.00 0.00 0.00 3.08
282 283 8.838365 ACGTCTTATATTAGTTCACAGAGGTAG 58.162 37.037 0.00 0.00 0.00 3.18
283 284 8.838365 CGTCTTATATTAGTTCACAGAGGTAGT 58.162 37.037 0.00 0.00 0.00 2.73
333 334 7.833285 ATGAAACTAATTTGGTGTTGTAGGT 57.167 32.000 0.00 0.00 0.00 3.08
334 335 7.033530 TGAAACTAATTTGGTGTTGTAGGTG 57.966 36.000 0.00 0.00 0.00 4.00
335 336 6.603997 TGAAACTAATTTGGTGTTGTAGGTGT 59.396 34.615 0.00 0.00 0.00 4.16
336 337 7.122948 TGAAACTAATTTGGTGTTGTAGGTGTT 59.877 33.333 0.00 0.00 0.00 3.32
337 338 6.385649 ACTAATTTGGTGTTGTAGGTGTTG 57.614 37.500 0.00 0.00 0.00 3.33
338 339 4.664150 AATTTGGTGTTGTAGGTGTTGG 57.336 40.909 0.00 0.00 0.00 3.77
339 340 2.810870 TTGGTGTTGTAGGTGTTGGT 57.189 45.000 0.00 0.00 0.00 3.67
340 341 2.810870 TGGTGTTGTAGGTGTTGGTT 57.189 45.000 0.00 0.00 0.00 3.67
341 342 3.928005 TGGTGTTGTAGGTGTTGGTTA 57.072 42.857 0.00 0.00 0.00 2.85
342 343 4.440826 TGGTGTTGTAGGTGTTGGTTAT 57.559 40.909 0.00 0.00 0.00 1.89
343 344 5.563876 TGGTGTTGTAGGTGTTGGTTATA 57.436 39.130 0.00 0.00 0.00 0.98
344 345 6.129414 TGGTGTTGTAGGTGTTGGTTATAT 57.871 37.500 0.00 0.00 0.00 0.86
345 346 6.544650 TGGTGTTGTAGGTGTTGGTTATATT 58.455 36.000 0.00 0.00 0.00 1.28
346 347 7.005296 TGGTGTTGTAGGTGTTGGTTATATTT 58.995 34.615 0.00 0.00 0.00 1.40
347 348 8.162085 TGGTGTTGTAGGTGTTGGTTATATTTA 58.838 33.333 0.00 0.00 0.00 1.40
348 349 9.181061 GGTGTTGTAGGTGTTGGTTATATTTAT 57.819 33.333 0.00 0.00 0.00 1.40
362 363 8.995220 TGGTTATATTTATATTGAGTTGGTCGC 58.005 33.333 0.00 0.00 0.00 5.19
363 364 8.995220 GGTTATATTTATATTGAGTTGGTCGCA 58.005 33.333 0.00 0.00 0.00 5.10
364 365 9.807386 GTTATATTTATATTGAGTTGGTCGCAC 57.193 33.333 0.00 0.00 0.00 5.34
365 366 9.772973 TTATATTTATATTGAGTTGGTCGCACT 57.227 29.630 0.00 0.00 0.00 4.40
366 367 8.677148 ATATTTATATTGAGTTGGTCGCACTT 57.323 30.769 0.00 0.00 0.00 3.16
367 368 9.772973 ATATTTATATTGAGTTGGTCGCACTTA 57.227 29.630 0.00 0.00 0.00 2.24
368 369 7.908827 TTTATATTGAGTTGGTCGCACTTAA 57.091 32.000 0.00 0.00 0.00 1.85
369 370 7.534085 TTATATTGAGTTGGTCGCACTTAAG 57.466 36.000 0.00 0.00 0.00 1.85
370 371 1.508632 TGAGTTGGTCGCACTTAAGC 58.491 50.000 1.29 0.00 0.00 3.09
371 372 1.202592 TGAGTTGGTCGCACTTAAGCA 60.203 47.619 1.29 0.00 0.00 3.91
372 373 1.194772 GAGTTGGTCGCACTTAAGCAC 59.805 52.381 1.29 0.00 0.00 4.40
373 374 0.941542 GTTGGTCGCACTTAAGCACA 59.058 50.000 1.29 0.00 0.00 4.57
374 375 1.332375 GTTGGTCGCACTTAAGCACAA 59.668 47.619 1.29 0.00 0.00 3.33
375 376 1.669604 TGGTCGCACTTAAGCACAAA 58.330 45.000 1.29 0.00 0.00 2.83
376 377 1.332375 TGGTCGCACTTAAGCACAAAC 59.668 47.619 1.29 0.00 0.00 2.93
377 378 1.334689 GGTCGCACTTAAGCACAAACC 60.335 52.381 1.29 0.86 0.00 3.27
378 379 0.948678 TCGCACTTAAGCACAAACCC 59.051 50.000 1.29 0.00 0.00 4.11
379 380 0.665835 CGCACTTAAGCACAAACCCA 59.334 50.000 1.29 0.00 0.00 4.51
380 381 1.066303 CGCACTTAAGCACAAACCCAA 59.934 47.619 1.29 0.00 0.00 4.12
381 382 2.480416 CGCACTTAAGCACAAACCCAAA 60.480 45.455 1.29 0.00 0.00 3.28
382 383 3.526534 GCACTTAAGCACAAACCCAAAA 58.473 40.909 1.29 0.00 0.00 2.44
383 384 3.308595 GCACTTAAGCACAAACCCAAAAC 59.691 43.478 1.29 0.00 0.00 2.43
384 385 4.754322 CACTTAAGCACAAACCCAAAACT 58.246 39.130 1.29 0.00 0.00 2.66
385 386 5.175127 CACTTAAGCACAAACCCAAAACTT 58.825 37.500 1.29 0.00 0.00 2.66
386 387 5.290885 CACTTAAGCACAAACCCAAAACTTC 59.709 40.000 1.29 0.00 0.00 3.01
387 388 3.971245 AAGCACAAACCCAAAACTTCA 57.029 38.095 0.00 0.00 0.00 3.02
388 389 3.245518 AGCACAAACCCAAAACTTCAC 57.754 42.857 0.00 0.00 0.00 3.18
389 390 2.093711 AGCACAAACCCAAAACTTCACC 60.094 45.455 0.00 0.00 0.00 4.02
390 391 2.354203 GCACAAACCCAAAACTTCACCA 60.354 45.455 0.00 0.00 0.00 4.17
391 392 3.866449 GCACAAACCCAAAACTTCACCAA 60.866 43.478 0.00 0.00 0.00 3.67
392 393 4.319177 CACAAACCCAAAACTTCACCAAA 58.681 39.130 0.00 0.00 0.00 3.28
393 394 4.391523 CACAAACCCAAAACTTCACCAAAG 59.608 41.667 0.00 0.00 41.08 2.77
394 395 3.904800 AACCCAAAACTTCACCAAAGG 57.095 42.857 0.00 0.00 39.47 3.11
395 396 2.115427 ACCCAAAACTTCACCAAAGGG 58.885 47.619 0.00 0.00 39.47 3.95
405 406 3.683937 CCAAAGGGTGCGCTTGGG 61.684 66.667 15.61 7.84 36.70 4.12
406 407 2.597217 CAAAGGGTGCGCTTGGGA 60.597 61.111 9.73 0.00 0.00 4.37
407 408 1.978617 CAAAGGGTGCGCTTGGGAT 60.979 57.895 9.73 0.00 0.00 3.85
408 409 1.228862 AAAGGGTGCGCTTGGGATT 60.229 52.632 9.73 0.00 0.00 3.01
409 410 0.831711 AAAGGGTGCGCTTGGGATTT 60.832 50.000 9.73 0.00 0.00 2.17
410 411 1.535204 AAGGGTGCGCTTGGGATTTG 61.535 55.000 9.73 0.00 0.00 2.32
411 412 1.976474 GGGTGCGCTTGGGATTTGA 60.976 57.895 9.73 0.00 0.00 2.69
412 413 1.508088 GGTGCGCTTGGGATTTGAG 59.492 57.895 9.73 0.00 0.00 3.02
413 414 0.960364 GGTGCGCTTGGGATTTGAGA 60.960 55.000 9.73 0.00 0.00 3.27
414 415 0.881118 GTGCGCTTGGGATTTGAGAA 59.119 50.000 9.73 0.00 0.00 2.87
415 416 1.135575 GTGCGCTTGGGATTTGAGAAG 60.136 52.381 9.73 0.00 0.00 2.85
416 417 0.453390 GCGCTTGGGATTTGAGAAGG 59.547 55.000 0.00 0.00 0.00 3.46
417 418 1.950484 GCGCTTGGGATTTGAGAAGGA 60.950 52.381 0.00 0.00 0.00 3.36
418 419 2.436417 CGCTTGGGATTTGAGAAGGAA 58.564 47.619 0.00 0.00 0.00 3.36
419 420 2.819608 CGCTTGGGATTTGAGAAGGAAA 59.180 45.455 0.00 0.00 0.00 3.13
420 421 3.445096 CGCTTGGGATTTGAGAAGGAAAT 59.555 43.478 0.00 0.00 0.00 2.17
421 422 4.082026 CGCTTGGGATTTGAGAAGGAAATT 60.082 41.667 0.00 0.00 0.00 1.82
422 423 5.567423 CGCTTGGGATTTGAGAAGGAAATTT 60.567 40.000 0.00 0.00 0.00 1.82
423 424 6.350110 CGCTTGGGATTTGAGAAGGAAATTTA 60.350 38.462 0.00 0.00 0.00 1.40
424 425 7.559486 GCTTGGGATTTGAGAAGGAAATTTAT 58.441 34.615 0.00 0.00 0.00 1.40
425 426 7.493645 GCTTGGGATTTGAGAAGGAAATTTATG 59.506 37.037 0.00 0.00 0.00 1.90
426 427 8.663209 TTGGGATTTGAGAAGGAAATTTATGA 57.337 30.769 0.00 0.00 0.00 2.15
427 428 8.663209 TGGGATTTGAGAAGGAAATTTATGAA 57.337 30.769 0.00 0.00 0.00 2.57
428 429 9.270707 TGGGATTTGAGAAGGAAATTTATGAAT 57.729 29.630 0.00 0.00 0.00 2.57
462 463 4.413495 AAAAATTAGCGCGCTACAGAAA 57.587 36.364 38.48 26.50 0.00 2.52
463 464 4.413495 AAAATTAGCGCGCTACAGAAAA 57.587 36.364 38.48 25.75 0.00 2.29
464 465 4.616181 AAATTAGCGCGCTACAGAAAAT 57.384 36.364 38.48 26.78 0.00 1.82
465 466 5.728351 AAATTAGCGCGCTACAGAAAATA 57.272 34.783 38.48 22.55 0.00 1.40
466 467 4.974103 ATTAGCGCGCTACAGAAAATAG 57.026 40.909 38.48 0.00 0.00 1.73
467 468 0.931005 AGCGCGCTACAGAAAATAGC 59.069 50.000 35.79 0.00 41.43 2.97
472 473 0.042100 GCTACAGAAAATAGCGCGGC 60.042 55.000 8.83 0.00 36.02 6.53
473 474 0.582005 CTACAGAAAATAGCGCGGCC 59.418 55.000 8.83 0.00 0.00 6.13
474 475 0.812412 TACAGAAAATAGCGCGGCCC 60.812 55.000 8.83 0.00 0.00 5.80
475 476 2.516225 AGAAAATAGCGCGGCCCC 60.516 61.111 8.83 0.00 0.00 5.80
476 477 2.516225 GAAAATAGCGCGGCCCCT 60.516 61.111 8.83 0.00 0.00 4.79
477 478 2.828549 AAAATAGCGCGGCCCCTG 60.829 61.111 8.83 0.00 0.00 4.45
478 479 3.338275 AAAATAGCGCGGCCCCTGA 62.338 57.895 8.83 0.00 0.00 3.86
479 480 2.830186 AAAATAGCGCGGCCCCTGAA 62.830 55.000 8.83 0.00 0.00 3.02
480 481 2.830186 AAATAGCGCGGCCCCTGAAA 62.830 55.000 8.83 0.00 0.00 2.69
481 482 2.830186 AATAGCGCGGCCCCTGAAAA 62.830 55.000 8.83 0.00 0.00 2.29
482 483 2.624674 ATAGCGCGGCCCCTGAAAAT 62.625 55.000 8.83 0.00 0.00 1.82
483 484 1.973816 TAGCGCGGCCCCTGAAAATA 61.974 55.000 8.83 0.00 0.00 1.40
484 485 2.193536 GCGCGGCCCCTGAAAATAT 61.194 57.895 8.83 0.00 0.00 1.28
485 486 1.654220 CGCGGCCCCTGAAAATATG 59.346 57.895 0.00 0.00 0.00 1.78
486 487 1.363807 GCGGCCCCTGAAAATATGC 59.636 57.895 0.00 0.00 0.00 3.14
487 488 1.109323 GCGGCCCCTGAAAATATGCT 61.109 55.000 0.00 0.00 0.00 3.79
488 489 1.817740 GCGGCCCCTGAAAATATGCTA 60.818 52.381 0.00 0.00 0.00 3.49
489 490 2.795329 CGGCCCCTGAAAATATGCTAT 58.205 47.619 0.00 0.00 0.00 2.97
490 491 3.157087 CGGCCCCTGAAAATATGCTATT 58.843 45.455 0.00 0.00 0.00 1.73
491 492 4.331968 CGGCCCCTGAAAATATGCTATTA 58.668 43.478 0.00 0.00 0.00 0.98
492 493 4.396166 CGGCCCCTGAAAATATGCTATTAG 59.604 45.833 0.00 0.00 0.00 1.73
493 494 4.158579 GGCCCCTGAAAATATGCTATTAGC 59.841 45.833 8.80 8.80 42.82 3.09
494 495 4.142600 GCCCCTGAAAATATGCTATTAGCG 60.143 45.833 10.94 0.00 46.26 4.26
495 496 5.003804 CCCCTGAAAATATGCTATTAGCGT 58.996 41.667 14.53 14.53 46.26 5.07
496 497 5.106555 CCCCTGAAAATATGCTATTAGCGTG 60.107 44.000 18.61 2.19 46.26 5.34
497 498 5.385617 CCTGAAAATATGCTATTAGCGTGC 58.614 41.667 18.61 5.49 46.26 5.34
498 499 5.180117 CCTGAAAATATGCTATTAGCGTGCT 59.820 40.000 18.61 0.00 46.26 4.40
499 500 6.368791 CCTGAAAATATGCTATTAGCGTGCTA 59.631 38.462 18.61 0.00 46.26 3.49
500 501 7.065085 CCTGAAAATATGCTATTAGCGTGCTAT 59.935 37.037 18.61 5.81 46.26 2.97
501 502 8.996024 TGAAAATATGCTATTAGCGTGCTATA 57.004 30.769 18.61 7.66 46.26 1.31
502 503 9.087424 TGAAAATATGCTATTAGCGTGCTATAG 57.913 33.333 18.61 7.85 46.26 1.31
503 504 7.470289 AAATATGCTATTAGCGTGCTATAGC 57.530 36.000 18.18 18.18 46.26 2.97
504 505 2.863739 TGCTATTAGCGTGCTATAGCG 58.136 47.619 19.55 7.69 46.26 4.26
505 506 2.228103 TGCTATTAGCGTGCTATAGCGT 59.772 45.455 19.55 7.04 46.26 5.07
506 507 2.847133 GCTATTAGCGTGCTATAGCGTC 59.153 50.000 19.55 13.68 45.83 5.19
507 508 3.426426 GCTATTAGCGTGCTATAGCGTCT 60.426 47.826 19.55 16.75 45.83 4.18
508 509 2.682952 TTAGCGTGCTATAGCGTCTC 57.317 50.000 19.55 10.27 45.83 3.36
509 510 0.511653 TAGCGTGCTATAGCGTCTCG 59.488 55.000 19.55 19.46 45.83 4.04
510 511 1.009900 GCGTGCTATAGCGTCTCGT 60.010 57.895 19.55 0.00 45.83 4.18
511 512 1.262824 GCGTGCTATAGCGTCTCGTG 61.263 60.000 19.55 5.45 45.83 4.35
512 513 1.262824 CGTGCTATAGCGTCTCGTGC 61.263 60.000 19.55 2.18 45.83 5.34
513 514 0.029567 GTGCTATAGCGTCTCGTGCT 59.970 55.000 19.55 0.00 45.83 4.40
515 516 1.263484 TGCTATAGCGTCTCGTGCTAC 59.737 52.381 19.55 0.00 46.81 3.58
516 517 1.263484 GCTATAGCGTCTCGTGCTACA 59.737 52.381 9.40 0.00 46.81 2.74
517 518 2.286831 GCTATAGCGTCTCGTGCTACAA 60.287 50.000 9.40 0.00 46.81 2.41
518 519 2.190325 ATAGCGTCTCGTGCTACAAC 57.810 50.000 0.00 0.00 46.81 3.32
519 520 0.179207 TAGCGTCTCGTGCTACAACG 60.179 55.000 0.00 0.00 43.71 4.10
520 521 1.728426 GCGTCTCGTGCTACAACGT 60.728 57.895 0.00 0.00 43.96 3.99
521 522 1.930816 GCGTCTCGTGCTACAACGTG 61.931 60.000 0.00 0.00 43.96 4.49
522 523 1.773496 GTCTCGTGCTACAACGTGC 59.227 57.895 0.00 0.00 43.96 5.34
523 524 1.372499 TCTCGTGCTACAACGTGCC 60.372 57.895 0.00 0.00 43.96 5.01
524 525 1.663388 CTCGTGCTACAACGTGCCA 60.663 57.895 0.00 0.00 43.96 4.92
525 526 1.617755 CTCGTGCTACAACGTGCCAG 61.618 60.000 0.00 0.00 43.96 4.85
526 527 2.667318 CGTGCTACAACGTGCCAGG 61.667 63.158 0.00 0.00 38.74 4.45
527 528 1.301401 GTGCTACAACGTGCCAGGA 60.301 57.895 0.00 0.00 0.00 3.86
528 529 1.301401 TGCTACAACGTGCCAGGAC 60.301 57.895 0.00 0.00 0.00 3.85
529 530 2.380410 GCTACAACGTGCCAGGACG 61.380 63.158 10.28 10.28 45.09 4.79
530 531 1.736645 CTACAACGTGCCAGGACGG 60.737 63.158 16.08 1.80 43.84 4.79
531 532 2.149803 CTACAACGTGCCAGGACGGA 62.150 60.000 16.08 0.00 43.84 4.69
532 533 2.149803 TACAACGTGCCAGGACGGAG 62.150 60.000 16.08 9.86 43.84 4.63
533 534 4.003788 AACGTGCCAGGACGGAGG 62.004 66.667 16.08 0.00 43.84 4.30
535 536 3.066190 CGTGCCAGGACGGAGGTA 61.066 66.667 3.55 0.00 36.56 3.08
536 537 2.893398 GTGCCAGGACGGAGGTAG 59.107 66.667 0.00 0.00 36.56 3.18
537 538 1.982938 GTGCCAGGACGGAGGTAGT 60.983 63.158 0.00 0.00 36.56 2.73
538 539 0.682209 GTGCCAGGACGGAGGTAGTA 60.682 60.000 0.00 0.00 36.56 1.82
539 540 0.040058 TGCCAGGACGGAGGTAGTAA 59.960 55.000 0.00 0.00 36.56 2.24
540 541 0.745468 GCCAGGACGGAGGTAGTAAG 59.255 60.000 0.00 0.00 36.56 2.34
541 542 1.959028 GCCAGGACGGAGGTAGTAAGT 60.959 57.143 0.00 0.00 36.56 2.24
542 543 2.684927 GCCAGGACGGAGGTAGTAAGTA 60.685 54.545 0.00 0.00 36.56 2.24
543 544 3.830121 CCAGGACGGAGGTAGTAAGTAT 58.170 50.000 0.00 0.00 36.56 2.12
544 545 4.213513 CCAGGACGGAGGTAGTAAGTATT 58.786 47.826 0.00 0.00 36.56 1.89
545 546 5.380043 CCAGGACGGAGGTAGTAAGTATTA 58.620 45.833 0.00 0.00 36.56 0.98
546 547 5.240403 CCAGGACGGAGGTAGTAAGTATTAC 59.760 48.000 0.00 0.00 44.82 1.89
574 575 4.416505 CGAAGGTTAACTCTACACTCGT 57.583 45.455 5.42 0.00 0.00 4.18
575 576 4.401714 CGAAGGTTAACTCTACACTCGTC 58.598 47.826 5.42 0.00 0.00 4.20
576 577 4.083643 CGAAGGTTAACTCTACACTCGTCA 60.084 45.833 5.42 0.00 0.00 4.35
577 578 5.373981 AAGGTTAACTCTACACTCGTCAG 57.626 43.478 5.42 0.00 0.00 3.51
578 579 4.396522 AGGTTAACTCTACACTCGTCAGT 58.603 43.478 5.42 0.00 0.00 3.41
589 590 3.238108 ACTCGTCAGTGATGACCAATC 57.762 47.619 11.11 0.00 35.52 2.67
590 591 2.562738 ACTCGTCAGTGATGACCAATCA 59.437 45.455 11.11 0.00 43.24 2.57
591 592 3.185330 CTCGTCAGTGATGACCAATCAG 58.815 50.000 11.11 0.00 46.09 2.90
599 600 6.053632 AGTGATGACCAATCAGTGATAACA 57.946 37.500 5.94 5.16 46.09 2.41
600 601 6.475504 AGTGATGACCAATCAGTGATAACAA 58.524 36.000 5.94 0.00 46.09 2.83
601 602 7.114754 AGTGATGACCAATCAGTGATAACAAT 58.885 34.615 5.94 0.00 46.09 2.71
602 603 7.613022 AGTGATGACCAATCAGTGATAACAATT 59.387 33.333 5.94 0.00 46.09 2.32
603 604 8.246180 GTGATGACCAATCAGTGATAACAATTT 58.754 33.333 5.94 0.00 46.09 1.82
604 605 8.805175 TGATGACCAATCAGTGATAACAATTTT 58.195 29.630 5.94 0.00 40.50 1.82
605 606 9.294030 GATGACCAATCAGTGATAACAATTTTC 57.706 33.333 5.94 0.00 38.57 2.29
606 607 8.408043 TGACCAATCAGTGATAACAATTTTCT 57.592 30.769 5.94 0.00 0.00 2.52
607 608 9.513906 TGACCAATCAGTGATAACAATTTTCTA 57.486 29.630 5.94 0.00 0.00 2.10
646 647 5.391577 TGGTAACAGTTTTCTAGGGGTTT 57.608 39.130 0.00 0.00 46.17 3.27
647 648 5.768752 TGGTAACAGTTTTCTAGGGGTTTT 58.231 37.500 0.00 0.00 46.17 2.43
648 649 5.829391 TGGTAACAGTTTTCTAGGGGTTTTC 59.171 40.000 0.00 0.00 46.17 2.29
649 650 6.066690 GGTAACAGTTTTCTAGGGGTTTTCT 58.933 40.000 0.00 0.00 0.00 2.52
650 651 7.147337 TGGTAACAGTTTTCTAGGGGTTTTCTA 60.147 37.037 0.00 0.00 46.17 2.10
651 652 7.389884 GGTAACAGTTTTCTAGGGGTTTTCTAG 59.610 40.741 0.00 0.00 36.46 2.43
652 653 6.758806 ACAGTTTTCTAGGGGTTTTCTAGA 57.241 37.500 0.00 0.00 40.77 2.43
653 654 7.145474 ACAGTTTTCTAGGGGTTTTCTAGAA 57.855 36.000 0.00 0.00 46.18 2.10
654 655 6.996879 ACAGTTTTCTAGGGGTTTTCTAGAAC 59.003 38.462 4.18 0.00 46.95 3.01
655 656 6.996282 CAGTTTTCTAGGGGTTTTCTAGAACA 59.004 38.462 4.18 0.00 46.95 3.18
656 657 7.501225 CAGTTTTCTAGGGGTTTTCTAGAACAA 59.499 37.037 4.18 0.57 46.95 2.83
657 658 7.501559 AGTTTTCTAGGGGTTTTCTAGAACAAC 59.498 37.037 4.18 12.16 46.95 3.32
658 659 6.503560 TTCTAGGGGTTTTCTAGAACAACA 57.496 37.500 21.48 2.70 44.29 3.33
659 660 6.110411 TCTAGGGGTTTTCTAGAACAACAG 57.890 41.667 21.48 14.62 39.90 3.16
660 661 4.790718 AGGGGTTTTCTAGAACAACAGT 57.209 40.909 21.48 4.37 0.00 3.55
661 662 5.125367 AGGGGTTTTCTAGAACAACAGTT 57.875 39.130 21.48 10.51 0.00 3.16
662 663 5.516044 AGGGGTTTTCTAGAACAACAGTTT 58.484 37.500 21.48 9.41 0.00 2.66
663 664 5.955959 AGGGGTTTTCTAGAACAACAGTTTT 59.044 36.000 21.48 8.32 0.00 2.43
664 665 6.096423 AGGGGTTTTCTAGAACAACAGTTTTC 59.904 38.462 21.48 10.42 0.00 2.29
665 666 6.270815 GGGTTTTCTAGAACAACAGTTTTCC 58.729 40.000 21.48 13.64 0.00 3.13
666 667 6.096423 GGGTTTTCTAGAACAACAGTTTTCCT 59.904 38.462 21.48 0.00 0.00 3.36
667 668 7.363530 GGGTTTTCTAGAACAACAGTTTTCCTT 60.364 37.037 21.48 0.00 0.00 3.36
668 669 7.701078 GGTTTTCTAGAACAACAGTTTTCCTTC 59.299 37.037 21.48 6.61 0.00 3.46
669 670 8.459635 GTTTTCTAGAACAACAGTTTTCCTTCT 58.540 33.333 4.18 0.00 0.00 2.85
670 671 8.575649 TTTCTAGAACAACAGTTTTCCTTCTT 57.424 30.769 4.18 0.00 0.00 2.52
671 672 8.575649 TTCTAGAACAACAGTTTTCCTTCTTT 57.424 30.769 0.00 0.00 0.00 2.52
672 673 8.575649 TCTAGAACAACAGTTTTCCTTCTTTT 57.424 30.769 0.00 0.00 0.00 2.27
673 674 9.020731 TCTAGAACAACAGTTTTCCTTCTTTTT 57.979 29.630 0.00 0.00 0.00 1.94
693 694 6.607004 TTTTTAGGGACAAACAGTTTTCCA 57.393 33.333 20.11 6.46 0.00 3.53
694 695 5.845391 TTTAGGGACAAACAGTTTTCCAG 57.155 39.130 20.11 5.08 0.00 3.86
695 696 2.666317 AGGGACAAACAGTTTTCCAGG 58.334 47.619 20.11 4.79 0.00 4.45
696 697 2.024369 AGGGACAAACAGTTTTCCAGGT 60.024 45.455 20.11 7.36 0.00 4.00
697 698 2.764010 GGGACAAACAGTTTTCCAGGTT 59.236 45.455 20.11 0.00 0.00 3.50
698 699 3.196901 GGGACAAACAGTTTTCCAGGTTT 59.803 43.478 20.11 0.00 34.03 3.27
699 700 4.323180 GGGACAAACAGTTTTCCAGGTTTT 60.323 41.667 20.11 0.00 31.57 2.43
700 701 5.242434 GGACAAACAGTTTTCCAGGTTTTT 58.758 37.500 16.40 0.00 31.57 1.94
727 728 7.404671 TTTTAGGGAATTGGTGAGAATTAGC 57.595 36.000 0.00 0.00 0.00 3.09
728 729 4.591321 AGGGAATTGGTGAGAATTAGCA 57.409 40.909 0.00 0.00 0.00 3.49
729 730 4.530875 AGGGAATTGGTGAGAATTAGCAG 58.469 43.478 0.00 0.00 0.00 4.24
730 731 4.228210 AGGGAATTGGTGAGAATTAGCAGA 59.772 41.667 0.00 0.00 0.00 4.26
731 732 4.578105 GGGAATTGGTGAGAATTAGCAGAG 59.422 45.833 0.00 0.00 0.00 3.35
732 733 5.431765 GGAATTGGTGAGAATTAGCAGAGA 58.568 41.667 0.00 0.00 0.00 3.10
733 734 6.060788 GGAATTGGTGAGAATTAGCAGAGAT 58.939 40.000 0.00 0.00 0.00 2.75
734 735 6.017275 GGAATTGGTGAGAATTAGCAGAGATG 60.017 42.308 0.00 0.00 0.00 2.90
735 736 4.412796 TGGTGAGAATTAGCAGAGATGG 57.587 45.455 0.00 0.00 0.00 3.51
736 737 3.135348 TGGTGAGAATTAGCAGAGATGGG 59.865 47.826 0.00 0.00 0.00 4.00
737 738 3.137533 GTGAGAATTAGCAGAGATGGGC 58.862 50.000 0.00 0.00 0.00 5.36
738 739 3.044156 TGAGAATTAGCAGAGATGGGCT 58.956 45.455 0.00 0.00 43.94 5.19
739 740 3.181457 TGAGAATTAGCAGAGATGGGCTG 60.181 47.826 0.00 0.00 41.25 4.85
745 746 3.008141 CAGAGATGGGCTGCATCTG 57.992 57.895 10.45 5.67 39.29 2.90
746 747 0.180642 CAGAGATGGGCTGCATCTGT 59.819 55.000 10.45 4.58 39.29 3.41
747 748 0.469070 AGAGATGGGCTGCATCTGTC 59.531 55.000 10.45 0.00 39.29 3.51
748 749 0.534652 GAGATGGGCTGCATCTGTCC 60.535 60.000 10.45 0.00 39.29 4.02
749 750 1.890979 GATGGGCTGCATCTGTCCG 60.891 63.158 0.50 0.00 29.45 4.79
750 751 2.315781 GATGGGCTGCATCTGTCCGA 62.316 60.000 0.50 0.00 29.45 4.55
751 752 1.703014 ATGGGCTGCATCTGTCCGAT 61.703 55.000 0.50 0.00 29.45 4.18
752 753 1.596477 GGGCTGCATCTGTCCGATC 60.596 63.158 0.50 0.00 0.00 3.69
753 754 1.596477 GGCTGCATCTGTCCGATCC 60.596 63.158 0.50 0.00 0.00 3.36
754 755 1.596477 GCTGCATCTGTCCGATCCC 60.596 63.158 0.00 0.00 0.00 3.85
755 756 2.037620 GCTGCATCTGTCCGATCCCT 62.038 60.000 0.00 0.00 0.00 4.20
756 757 0.033228 CTGCATCTGTCCGATCCCTC 59.967 60.000 0.00 0.00 0.00 4.30
757 758 1.369321 GCATCTGTCCGATCCCTCC 59.631 63.158 0.00 0.00 0.00 4.30
758 759 1.662608 CATCTGTCCGATCCCTCCG 59.337 63.158 0.00 0.00 0.00 4.63
784 785 3.428282 GCAACAACGGGCCGGTAG 61.428 66.667 31.78 20.42 0.00 3.18
785 786 2.744709 CAACAACGGGCCGGTAGG 60.745 66.667 31.78 15.99 41.62 3.18
805 806 3.463728 AATTATACCGGCCCGCGCA 62.464 57.895 8.75 0.00 36.38 6.09
826 827 0.986019 AACCACCAGTCAGTCCACCA 60.986 55.000 0.00 0.00 0.00 4.17
827 828 1.372683 CCACCAGTCAGTCCACCAG 59.627 63.158 0.00 0.00 0.00 4.00
828 829 1.302033 CACCAGTCAGTCCACCAGC 60.302 63.158 0.00 0.00 0.00 4.85
829 830 2.047844 CCAGTCAGTCCACCAGCG 60.048 66.667 0.00 0.00 0.00 5.18
856 857 2.722201 AAGCGGATCCACGTCCCTC 61.722 63.158 13.41 0.00 34.67 4.30
964 971 3.068691 CCGCCCCTCGAGTCAAGA 61.069 66.667 12.31 0.00 41.67 3.02
993 1006 2.758327 CCCACCGATCTCCGTCCA 60.758 66.667 0.00 0.00 36.31 4.02
1137 1157 1.764854 CCCCGCCCAGTACCAGTAT 60.765 63.158 0.00 0.00 0.00 2.12
1329 1574 2.378038 CCAGGTACAATTCCCCACATG 58.622 52.381 0.00 0.00 0.00 3.21
1340 1585 1.565759 TCCCCACATGCTCTTGCTTAT 59.434 47.619 0.00 0.00 40.48 1.73
1364 1609 1.268032 CGATGCTTATGTTTGGTCGGC 60.268 52.381 0.00 0.00 0.00 5.54
1368 1613 1.268032 GCTTATGTTTGGTCGGCGATG 60.268 52.381 14.79 0.00 0.00 3.84
1407 1730 7.620215 CAAATCGATCAGAATTCAGAAGTCTC 58.380 38.462 10.23 0.00 32.79 3.36
1409 1732 4.706962 TCGATCAGAATTCAGAAGTCTCCA 59.293 41.667 10.23 1.07 32.79 3.86
1418 1741 7.506938 AGAATTCAGAAGTCTCCAATCCAAAAA 59.493 33.333 7.32 0.00 27.98 1.94
1421 1744 6.546484 TCAGAAGTCTCCAATCCAAAAATCT 58.454 36.000 0.00 0.00 0.00 2.40
1422 1745 6.432162 TCAGAAGTCTCCAATCCAAAAATCTG 59.568 38.462 0.00 0.00 0.00 2.90
1423 1746 5.184671 AGAAGTCTCCAATCCAAAAATCTGC 59.815 40.000 0.00 0.00 0.00 4.26
1424 1747 3.441572 AGTCTCCAATCCAAAAATCTGCG 59.558 43.478 0.00 0.00 0.00 5.18
1425 1748 3.191371 GTCTCCAATCCAAAAATCTGCGT 59.809 43.478 0.00 0.00 0.00 5.24
1440 1763 2.492881 TCTGCGTGCATGATCCAAATTT 59.507 40.909 10.93 0.00 0.00 1.82
1441 1764 2.601314 CTGCGTGCATGATCCAAATTTG 59.399 45.455 10.93 11.40 0.00 2.32
1443 1766 3.252400 GCGTGCATGATCCAAATTTGAA 58.748 40.909 19.86 0.00 0.00 2.69
1449 1772 4.560035 GCATGATCCAAATTTGAACACTCG 59.440 41.667 19.86 1.00 0.00 4.18
1456 1779 4.570369 CCAAATTTGAACACTCGCCTTTTT 59.430 37.500 19.86 0.00 0.00 1.94
1459 1782 3.691049 TTGAACACTCGCCTTTTTCTG 57.309 42.857 0.00 0.00 0.00 3.02
1461 1784 1.604278 GAACACTCGCCTTTTTCTGCT 59.396 47.619 0.00 0.00 0.00 4.24
1462 1785 1.230324 ACACTCGCCTTTTTCTGCTC 58.770 50.000 0.00 0.00 0.00 4.26
1463 1786 0.164647 CACTCGCCTTTTTCTGCTCG 59.835 55.000 0.00 0.00 0.00 5.03
1466 1789 1.966451 CGCCTTTTTCTGCTCGGGT 60.966 57.895 0.00 0.00 0.00 5.28
1467 1790 0.672401 CGCCTTTTTCTGCTCGGGTA 60.672 55.000 0.00 0.00 0.00 3.69
1468 1791 0.803117 GCCTTTTTCTGCTCGGGTAC 59.197 55.000 0.00 0.00 0.00 3.34
1475 1798 0.463295 TCTGCTCGGGTACTAGTCCG 60.463 60.000 15.15 15.15 46.89 4.79
1477 1800 1.452833 GCTCGGGTACTAGTCCGGT 60.453 63.158 19.61 0.00 45.69 5.28
1543 1869 5.809562 AGCTGAACTAGAATTCATCAACTCG 59.190 40.000 8.44 0.00 37.93 4.18
1555 1884 2.961526 TCAACTCGCCTGGATTCTAC 57.038 50.000 0.00 0.00 0.00 2.59
1578 1907 3.063588 GCTAAACGGGCTACTGATGTTTC 59.936 47.826 0.00 0.00 34.80 2.78
1596 1925 7.602644 TGATGTTTCAACTGGAACACTAGATAC 59.397 37.037 5.70 0.00 34.56 2.24
1629 1961 9.148879 ACTGTATATGCTCCTTTAGTCTAACAT 57.851 33.333 0.00 0.00 0.00 2.71
1656 1992 2.352225 GGTATTTGTGGCGACAATTGCA 60.352 45.455 15.36 0.42 46.06 4.08
1664 2000 1.421485 CGACAATTGCAGAGCGGAC 59.579 57.895 5.05 0.00 0.00 4.79
1675 2011 0.456221 AGAGCGGACTGTTACATCGG 59.544 55.000 0.00 0.00 0.00 4.18
1683 2019 4.612943 GGACTGTTACATCGGAGAGAATC 58.387 47.826 0.00 0.00 43.63 2.52
1684 2020 4.098044 GGACTGTTACATCGGAGAGAATCA 59.902 45.833 0.00 0.00 43.63 2.57
1693 2029 1.871408 CGGAGAGAATCATTGGGAGCG 60.871 57.143 0.00 0.00 37.82 5.03
1695 2031 2.208431 GAGAGAATCATTGGGAGCGTG 58.792 52.381 0.00 0.00 37.82 5.34
1698 2034 3.126831 GAGAATCATTGGGAGCGTGTAG 58.873 50.000 0.00 0.00 33.17 2.74
1705 2041 0.817654 TGGGAGCGTGTAGAGACATG 59.182 55.000 0.00 0.00 44.24 3.21
1711 2055 5.221185 GGGAGCGTGTAGAGACATGTAATTA 60.221 44.000 0.00 0.00 43.46 1.40
1747 2091 3.503363 TGTGCTGAATTCACTAGCCAAAG 59.497 43.478 13.74 0.00 36.64 2.77
1852 2196 2.799126 TTCGCATCAATTACTGGGGT 57.201 45.000 4.37 0.00 0.00 4.95
1872 2216 4.407945 GGGTAAACAGATAGGTGCCTAGAA 59.592 45.833 4.17 0.00 31.45 2.10
1914 2258 4.412843 TGGACCCCCAAGACTAATTTTTC 58.587 43.478 0.00 0.00 40.09 2.29
1927 2273 5.566469 ACTAATTTTTCCCCGATCAACAGA 58.434 37.500 0.00 0.00 0.00 3.41
1930 2276 2.489938 TTTCCCCGATCAACAGAAGG 57.510 50.000 0.00 0.00 0.00 3.46
1965 2311 7.393234 TGGTTCCATCTTTCATAGAAAAACGAT 59.607 33.333 0.00 0.00 36.22 3.73
2019 2382 4.887071 ACAAATGCAAAGACAACTCCTACA 59.113 37.500 0.00 0.00 0.00 2.74
2020 2383 5.536161 ACAAATGCAAAGACAACTCCTACAT 59.464 36.000 0.00 0.00 0.00 2.29
2070 2433 4.082125 AGAGCAATTACCAAAGGACCTTG 58.918 43.478 7.72 0.00 0.00 3.61
2082 2445 1.202976 AGGACCTTGCAGCAAGAACAT 60.203 47.619 32.94 20.90 43.42 2.71
2085 2448 3.445096 GGACCTTGCAGCAAGAACATAAT 59.555 43.478 32.94 11.28 43.42 1.28
2089 2452 5.105756 ACCTTGCAGCAAGAACATAATTACC 60.106 40.000 32.94 0.00 43.42 2.85
2090 2453 5.105797 CCTTGCAGCAAGAACATAATTACCA 60.106 40.000 32.94 0.00 43.42 3.25
2091 2454 6.406177 CCTTGCAGCAAGAACATAATTACCAT 60.406 38.462 32.94 0.00 43.42 3.55
2093 2456 5.887598 TGCAGCAAGAACATAATTACCATCT 59.112 36.000 0.00 0.00 0.00 2.90
2094 2457 7.053498 TGCAGCAAGAACATAATTACCATCTA 58.947 34.615 0.00 0.00 0.00 1.98
2095 2458 7.555914 TGCAGCAAGAACATAATTACCATCTAA 59.444 33.333 0.00 0.00 0.00 2.10
2096 2459 8.072567 GCAGCAAGAACATAATTACCATCTAAG 58.927 37.037 0.00 0.00 0.00 2.18
2097 2460 8.072567 CAGCAAGAACATAATTACCATCTAAGC 58.927 37.037 0.00 1.04 0.00 3.09
2102 2468 9.988815 AGAACATAATTACCATCTAAGCAGTAG 57.011 33.333 0.00 0.00 0.00 2.57
2137 2503 4.040461 CACTTCTTCAAAGAGGGGACTACA 59.960 45.833 6.80 0.00 44.43 2.74
2138 2504 4.040584 ACTTCTTCAAAGAGGGGACTACAC 59.959 45.833 6.80 0.00 44.43 2.90
2140 2506 5.006896 TCTTCAAAGAGGGGACTACACTA 57.993 43.478 0.00 0.00 44.43 2.74
2204 2570 0.721718 GCGTCCAAGGTTCTTCATCG 59.278 55.000 0.00 0.00 0.00 3.84
2205 2571 1.671850 GCGTCCAAGGTTCTTCATCGA 60.672 52.381 0.00 0.00 0.00 3.59
2214 2580 4.087182 AGGTTCTTCATCGAGTACTCCAA 58.913 43.478 17.23 6.20 0.00 3.53
2255 2621 1.975407 GCATCACCCACTGCAGCTT 60.975 57.895 15.27 0.00 38.28 3.74
2256 2622 1.530013 GCATCACCCACTGCAGCTTT 61.530 55.000 15.27 0.00 38.28 3.51
2263 2629 1.542492 CCACTGCAGCTTTTCAGGAT 58.458 50.000 15.27 0.00 34.76 3.24
2421 2787 2.917713 ACCCACTATCAAATGCCCAA 57.082 45.000 0.00 0.00 0.00 4.12
2487 2853 4.248058 CATTTCTGCAAATCCAAAGTCCC 58.752 43.478 0.00 0.00 28.97 4.46
2551 2917 3.301794 TGTTCCATAGCCAATGAGCAT 57.698 42.857 0.00 0.00 37.86 3.79
2623 2989 6.715347 TCACTTCATATAGCTCTAGCAACA 57.285 37.500 4.54 0.00 45.16 3.33
2677 3051 9.539825 GATTCAATCTCAGTACAGTGAATACAT 57.460 33.333 6.59 0.00 36.20 2.29
2685 3059 6.663523 TCAGTACAGTGAATACATTCCAGAGA 59.336 38.462 0.00 0.00 35.97 3.10
2729 3103 8.772250 TCCTAAATCCTAAGATTGTCACAAGAT 58.228 33.333 0.00 0.00 42.03 2.40
2730 3104 8.834465 CCTAAATCCTAAGATTGTCACAAGATG 58.166 37.037 0.00 0.00 42.03 2.90
2738 3112 9.565213 CTAAGATTGTCACAAGATGGAAAAATC 57.435 33.333 0.00 0.00 0.00 2.17
2934 3308 4.351874 TCTGAAGTTAAACCAGTCCCTG 57.648 45.455 0.00 0.00 0.00 4.45
3017 3392 2.286833 CCGTGGTATATTGGTGCTTTCG 59.713 50.000 0.00 0.00 0.00 3.46
3115 3490 7.231467 ACCTTTCTGATACAACCACAATACTT 58.769 34.615 0.00 0.00 0.00 2.24
3291 3684 8.700973 AGTTAAAATATTGGTATGCCCGAATTT 58.299 29.630 0.00 0.00 35.15 1.82
3292 3685 9.320352 GTTAAAATATTGGTATGCCCGAATTTT 57.680 29.630 15.36 15.36 34.78 1.82
3295 3688 3.859411 TTGGTATGCCCGAATTTTGAC 57.141 42.857 0.00 0.00 35.15 3.18
3402 3796 3.846360 ACGAGCTATAACCTGTCACAAC 58.154 45.455 0.00 0.00 0.00 3.32
3458 3852 1.096967 TGGAATTCGCTGCATCGCAT 61.097 50.000 4.79 0.00 38.13 4.73
3604 4001 4.724798 AGGCCCAGTTACATGATAGGTTAA 59.275 41.667 0.00 0.00 0.00 2.01
4435 4896 3.281240 CATTCTGTGCCAGTGCCC 58.719 61.111 2.68 0.00 36.33 5.36
4436 4897 1.604308 CATTCTGTGCCAGTGCCCA 60.604 57.895 2.68 0.00 36.33 5.36
4437 4898 1.303888 ATTCTGTGCCAGTGCCCAG 60.304 57.895 2.68 0.00 43.47 4.45
4438 4899 2.072874 ATTCTGTGCCAGTGCCCAGT 62.073 55.000 2.68 0.00 42.77 4.00
4439 4900 2.963928 TTCTGTGCCAGTGCCCAGTG 62.964 60.000 2.68 0.00 42.77 3.66
4482 4943 5.593010 AGTTTTATGTTTTAAGTTGCCGCA 58.407 33.333 0.00 0.00 0.00 5.69
4517 4978 4.202357 GCATCCCATCTCTATGTTGTGGTA 60.202 45.833 0.00 0.00 0.00 3.25
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 7.148423 TGTCTACATACATTCGTACGTTGTAGT 60.148 37.037 25.85 23.87 30.03 2.73
4 5 7.071014 TGTCTACATACATTCGTACGTTGTA 57.929 36.000 24.89 24.89 0.00 2.41
6 7 8.723777 ATATGTCTACATACATTCGTACGTTG 57.276 34.615 16.05 15.95 41.15 4.10
7 8 9.740239 AAATATGTCTACATACATTCGTACGTT 57.260 29.630 16.05 1.09 41.15 3.99
8 9 9.740239 AAAATATGTCTACATACATTCGTACGT 57.260 29.630 16.05 0.00 41.15 3.57
32 33 9.624697 GCAAAATGAGTGAATCTACACAATAAA 57.375 29.630 0.00 0.00 42.45 1.40
33 34 9.013229 AGCAAAATGAGTGAATCTACACAATAA 57.987 29.630 0.00 0.00 42.45 1.40
34 35 8.565896 AGCAAAATGAGTGAATCTACACAATA 57.434 30.769 0.00 0.00 42.45 1.90
35 36 7.458409 AGCAAAATGAGTGAATCTACACAAT 57.542 32.000 0.00 0.00 42.45 2.71
36 37 6.882610 AGCAAAATGAGTGAATCTACACAA 57.117 33.333 0.00 0.00 42.45 3.33
37 38 6.882610 AAGCAAAATGAGTGAATCTACACA 57.117 33.333 0.00 0.00 42.45 3.72
38 39 7.141363 ACAAAGCAAAATGAGTGAATCTACAC 58.859 34.615 0.00 0.00 40.60 2.90
39 40 7.275888 ACAAAGCAAAATGAGTGAATCTACA 57.724 32.000 0.00 0.00 0.00 2.74
40 41 9.282247 CATACAAAGCAAAATGAGTGAATCTAC 57.718 33.333 0.00 0.00 0.00 2.59
41 42 9.013229 ACATACAAAGCAAAATGAGTGAATCTA 57.987 29.630 0.00 0.00 0.00 1.98
42 43 7.889469 ACATACAAAGCAAAATGAGTGAATCT 58.111 30.769 0.00 0.00 0.00 2.40
43 44 9.624697 TTACATACAAAGCAAAATGAGTGAATC 57.375 29.630 0.00 0.00 0.00 2.52
45 46 9.624697 GATTACATACAAAGCAAAATGAGTGAA 57.375 29.630 0.00 0.00 0.00 3.18
46 47 8.791675 TGATTACATACAAAGCAAAATGAGTGA 58.208 29.630 0.00 0.00 0.00 3.41
47 48 8.969121 TGATTACATACAAAGCAAAATGAGTG 57.031 30.769 0.00 0.00 0.00 3.51
54 55 8.986847 CCAACAAATGATTACATACAAAGCAAA 58.013 29.630 0.00 0.00 35.50 3.68
55 56 8.363390 TCCAACAAATGATTACATACAAAGCAA 58.637 29.630 0.00 0.00 35.50 3.91
56 57 7.890515 TCCAACAAATGATTACATACAAAGCA 58.109 30.769 0.00 0.00 35.50 3.91
57 58 8.755696 TTCCAACAAATGATTACATACAAAGC 57.244 30.769 0.00 0.00 35.50 3.51
61 62 9.685276 AGAGATTCCAACAAATGATTACATACA 57.315 29.630 0.00 0.00 35.50 2.29
70 71 9.354673 AGTCTTTTTAGAGATTCCAACAAATGA 57.645 29.630 0.00 0.00 0.00 2.57
71 72 9.971922 AAGTCTTTTTAGAGATTCCAACAAATG 57.028 29.630 0.00 0.00 0.00 2.32
74 75 9.621629 TGTAAGTCTTTTTAGAGATTCCAACAA 57.378 29.630 0.00 0.00 0.00 2.83
75 76 9.793259 ATGTAAGTCTTTTTAGAGATTCCAACA 57.207 29.630 0.00 0.00 0.00 3.33
78 79 9.151471 CGAATGTAAGTCTTTTTAGAGATTCCA 57.849 33.333 0.00 0.00 0.00 3.53
79 80 8.604890 CCGAATGTAAGTCTTTTTAGAGATTCC 58.395 37.037 0.00 0.00 0.00 3.01
80 81 8.604890 CCCGAATGTAAGTCTTTTTAGAGATTC 58.395 37.037 0.00 0.00 0.00 2.52
81 82 8.319146 TCCCGAATGTAAGTCTTTTTAGAGATT 58.681 33.333 0.00 0.00 0.00 2.40
82 83 7.848128 TCCCGAATGTAAGTCTTTTTAGAGAT 58.152 34.615 0.00 0.00 0.00 2.75
83 84 7.235935 TCCCGAATGTAAGTCTTTTTAGAGA 57.764 36.000 0.00 0.00 0.00 3.10
84 85 7.411588 CGTTCCCGAATGTAAGTCTTTTTAGAG 60.412 40.741 0.00 0.00 35.63 2.43
85 86 6.366877 CGTTCCCGAATGTAAGTCTTTTTAGA 59.633 38.462 0.00 0.00 35.63 2.10
86 87 6.401796 CCGTTCCCGAATGTAAGTCTTTTTAG 60.402 42.308 0.00 0.00 35.63 1.85
87 88 5.409214 CCGTTCCCGAATGTAAGTCTTTTTA 59.591 40.000 0.00 0.00 35.63 1.52
88 89 4.214758 CCGTTCCCGAATGTAAGTCTTTTT 59.785 41.667 0.00 0.00 35.63 1.94
89 90 3.749609 CCGTTCCCGAATGTAAGTCTTTT 59.250 43.478 0.00 0.00 35.63 2.27
90 91 3.007182 TCCGTTCCCGAATGTAAGTCTTT 59.993 43.478 0.00 0.00 35.63 2.52
91 92 2.564062 TCCGTTCCCGAATGTAAGTCTT 59.436 45.455 0.00 0.00 35.63 3.01
92 93 2.165845 CTCCGTTCCCGAATGTAAGTCT 59.834 50.000 0.00 0.00 35.63 3.24
93 94 2.537401 CTCCGTTCCCGAATGTAAGTC 58.463 52.381 0.00 0.00 35.63 3.01
94 95 1.206371 CCTCCGTTCCCGAATGTAAGT 59.794 52.381 0.00 0.00 35.63 2.24
95 96 1.472728 CCCTCCGTTCCCGAATGTAAG 60.473 57.143 0.00 0.00 35.63 2.34
96 97 0.538118 CCCTCCGTTCCCGAATGTAA 59.462 55.000 0.00 0.00 35.63 2.41
97 98 1.332144 CCCCTCCGTTCCCGAATGTA 61.332 60.000 0.00 0.00 35.63 2.29
98 99 2.666098 CCCCTCCGTTCCCGAATGT 61.666 63.158 0.00 0.00 35.63 2.71
99 100 2.189521 CCCCTCCGTTCCCGAATG 59.810 66.667 0.00 0.00 35.63 2.67
100 101 2.534594 TACCCCCTCCGTTCCCGAAT 62.535 60.000 0.00 0.00 35.63 3.34
101 102 2.534594 ATACCCCCTCCGTTCCCGAA 62.535 60.000 0.00 0.00 35.63 4.30
102 103 1.654137 TATACCCCCTCCGTTCCCGA 61.654 60.000 0.00 0.00 35.63 5.14
103 104 0.760189 TTATACCCCCTCCGTTCCCG 60.760 60.000 0.00 0.00 0.00 5.14
104 105 1.738474 ATTATACCCCCTCCGTTCCC 58.262 55.000 0.00 0.00 0.00 3.97
105 106 5.394553 CGTATTATTATACCCCCTCCGTTCC 60.395 48.000 0.00 0.00 34.37 3.62
106 107 5.185828 ACGTATTATTATACCCCCTCCGTTC 59.814 44.000 0.00 0.00 34.37 3.95
107 108 5.086621 ACGTATTATTATACCCCCTCCGTT 58.913 41.667 0.00 0.00 34.37 4.44
108 109 4.677182 ACGTATTATTATACCCCCTCCGT 58.323 43.478 0.00 0.00 34.37 4.69
109 110 5.888161 AGTACGTATTATTATACCCCCTCCG 59.112 44.000 0.00 0.00 34.37 4.63
110 111 6.322456 GGAGTACGTATTATTATACCCCCTCC 59.678 46.154 0.00 1.41 35.61 4.30
111 112 6.322456 GGGAGTACGTATTATTATACCCCCTC 59.678 46.154 0.00 0.00 34.37 4.30
112 113 6.010381 AGGGAGTACGTATTATTATACCCCCT 60.010 42.308 0.00 0.00 35.74 4.79
113 114 6.197903 AGGGAGTACGTATTATTATACCCCC 58.802 44.000 0.00 0.00 35.74 5.40
114 115 6.322456 GGAGGGAGTACGTATTATTATACCCC 59.678 46.154 0.00 0.00 35.53 4.95
115 116 6.322456 GGGAGGGAGTACGTATTATTATACCC 59.678 46.154 0.00 0.10 34.37 3.69
116 117 6.891908 TGGGAGGGAGTACGTATTATTATACC 59.108 42.308 0.00 0.00 34.37 2.73
117 118 7.944729 TGGGAGGGAGTACGTATTATTATAC 57.055 40.000 0.00 0.00 34.51 1.47
118 119 7.781693 GGATGGGAGGGAGTACGTATTATTATA 59.218 40.741 0.00 0.00 0.00 0.98
119 120 6.610425 GGATGGGAGGGAGTACGTATTATTAT 59.390 42.308 0.00 0.00 0.00 1.28
120 121 5.954150 GGATGGGAGGGAGTACGTATTATTA 59.046 44.000 0.00 0.00 0.00 0.98
121 122 4.776308 GGATGGGAGGGAGTACGTATTATT 59.224 45.833 0.00 0.00 0.00 1.40
122 123 4.202749 TGGATGGGAGGGAGTACGTATTAT 60.203 45.833 0.00 0.00 0.00 1.28
123 124 3.140707 TGGATGGGAGGGAGTACGTATTA 59.859 47.826 0.00 0.00 0.00 0.98
124 125 2.090943 TGGATGGGAGGGAGTACGTATT 60.091 50.000 0.00 0.00 0.00 1.89
125 126 1.502039 TGGATGGGAGGGAGTACGTAT 59.498 52.381 0.00 0.00 0.00 3.06
126 127 0.928505 TGGATGGGAGGGAGTACGTA 59.071 55.000 0.00 0.00 0.00 3.57
127 128 0.042131 TTGGATGGGAGGGAGTACGT 59.958 55.000 0.00 0.00 0.00 3.57
128 129 1.200519 TTTGGATGGGAGGGAGTACG 58.799 55.000 0.00 0.00 0.00 3.67
129 130 3.953542 AATTTGGATGGGAGGGAGTAC 57.046 47.619 0.00 0.00 0.00 2.73
130 131 6.161348 TCAAATAATTTGGATGGGAGGGAGTA 59.839 38.462 0.00 0.00 40.98 2.59
131 132 5.043432 TCAAATAATTTGGATGGGAGGGAGT 60.043 40.000 0.00 0.00 40.98 3.85
132 133 5.457686 TCAAATAATTTGGATGGGAGGGAG 58.542 41.667 0.00 0.00 40.98 4.30
133 134 5.480058 TCAAATAATTTGGATGGGAGGGA 57.520 39.130 0.00 0.00 40.98 4.20
134 135 6.558488 TTTCAAATAATTTGGATGGGAGGG 57.442 37.500 0.00 0.00 40.98 4.30
135 136 9.465199 AAAATTTCAAATAATTTGGATGGGAGG 57.535 29.630 0.00 0.00 40.98 4.30
137 138 8.738106 GCAAAATTTCAAATAATTTGGATGGGA 58.262 29.630 8.65 0.00 40.98 4.37
138 139 8.521176 TGCAAAATTTCAAATAATTTGGATGGG 58.479 29.630 8.65 0.00 40.98 4.00
149 150 8.991026 CCTCAGACAAATGCAAAATTTCAAATA 58.009 29.630 0.00 0.00 0.00 1.40
150 151 7.499895 ACCTCAGACAAATGCAAAATTTCAAAT 59.500 29.630 0.00 0.00 0.00 2.32
151 152 6.822676 ACCTCAGACAAATGCAAAATTTCAAA 59.177 30.769 0.00 0.00 0.00 2.69
152 153 6.258287 CACCTCAGACAAATGCAAAATTTCAA 59.742 34.615 0.00 0.00 0.00 2.69
153 154 5.754406 CACCTCAGACAAATGCAAAATTTCA 59.246 36.000 0.00 0.00 0.00 2.69
154 155 5.984926 TCACCTCAGACAAATGCAAAATTTC 59.015 36.000 0.00 0.00 0.00 2.17
155 156 5.916318 TCACCTCAGACAAATGCAAAATTT 58.084 33.333 0.00 0.00 0.00 1.82
156 157 5.534207 TCACCTCAGACAAATGCAAAATT 57.466 34.783 0.00 0.00 0.00 1.82
157 158 5.534207 TTCACCTCAGACAAATGCAAAAT 57.466 34.783 0.00 0.00 0.00 1.82
158 159 4.998671 TTCACCTCAGACAAATGCAAAA 57.001 36.364 0.00 0.00 0.00 2.44
159 160 4.402155 AGTTTCACCTCAGACAAATGCAAA 59.598 37.500 0.00 0.00 0.00 3.68
160 161 3.953612 AGTTTCACCTCAGACAAATGCAA 59.046 39.130 0.00 0.00 0.00 4.08
161 162 3.554934 AGTTTCACCTCAGACAAATGCA 58.445 40.909 0.00 0.00 0.00 3.96
162 163 4.276926 AGAAGTTTCACCTCAGACAAATGC 59.723 41.667 0.00 0.00 0.00 3.56
163 164 5.297776 ACAGAAGTTTCACCTCAGACAAATG 59.702 40.000 0.00 0.00 0.00 2.32
164 165 5.440610 ACAGAAGTTTCACCTCAGACAAAT 58.559 37.500 0.00 0.00 0.00 2.32
165 166 4.843728 ACAGAAGTTTCACCTCAGACAAA 58.156 39.130 0.00 0.00 0.00 2.83
166 167 4.487714 ACAGAAGTTTCACCTCAGACAA 57.512 40.909 0.00 0.00 0.00 3.18
167 168 4.487714 AACAGAAGTTTCACCTCAGACA 57.512 40.909 0.00 0.00 33.11 3.41
168 169 6.049790 ACTTAACAGAAGTTTCACCTCAGAC 58.950 40.000 0.00 0.00 39.15 3.51
169 170 6.098409 AGACTTAACAGAAGTTTCACCTCAGA 59.902 38.462 0.00 0.00 39.15 3.27
170 171 6.201806 CAGACTTAACAGAAGTTTCACCTCAG 59.798 42.308 0.00 0.00 39.15 3.35
171 172 6.049149 CAGACTTAACAGAAGTTTCACCTCA 58.951 40.000 0.00 0.00 39.15 3.86
172 173 6.281405 TCAGACTTAACAGAAGTTTCACCTC 58.719 40.000 0.00 0.00 39.15 3.85
173 174 6.235231 TCAGACTTAACAGAAGTTTCACCT 57.765 37.500 0.00 0.00 39.15 4.00
174 175 6.706270 TGATCAGACTTAACAGAAGTTTCACC 59.294 38.462 0.00 0.00 39.15 4.02
175 176 7.715265 TGATCAGACTTAACAGAAGTTTCAC 57.285 36.000 0.00 0.00 39.15 3.18
176 177 8.908786 ATTGATCAGACTTAACAGAAGTTTCA 57.091 30.769 0.00 0.00 39.15 2.69
177 178 9.818796 GAATTGATCAGACTTAACAGAAGTTTC 57.181 33.333 0.00 0.00 39.15 2.78
178 179 9.566432 AGAATTGATCAGACTTAACAGAAGTTT 57.434 29.630 0.00 0.00 39.15 2.66
180 181 9.646427 GTAGAATTGATCAGACTTAACAGAAGT 57.354 33.333 0.00 0.00 0.00 3.01
181 182 9.645059 TGTAGAATTGATCAGACTTAACAGAAG 57.355 33.333 0.00 0.00 0.00 2.85
182 183 9.996554 TTGTAGAATTGATCAGACTTAACAGAA 57.003 29.630 0.00 0.00 0.00 3.02
183 184 9.996554 TTTGTAGAATTGATCAGACTTAACAGA 57.003 29.630 0.00 0.00 0.00 3.41
185 186 9.554395 TGTTTGTAGAATTGATCAGACTTAACA 57.446 29.630 0.00 6.28 0.00 2.41
198 199 9.722056 GGAGTAGCATATTTGTTTGTAGAATTG 57.278 33.333 0.00 0.00 0.00 2.32
199 200 8.903820 GGGAGTAGCATATTTGTTTGTAGAATT 58.096 33.333 0.00 0.00 0.00 2.17
200 201 8.275040 AGGGAGTAGCATATTTGTTTGTAGAAT 58.725 33.333 0.00 0.00 0.00 2.40
201 202 7.630082 AGGGAGTAGCATATTTGTTTGTAGAA 58.370 34.615 0.00 0.00 0.00 2.10
202 203 7.195374 AGGGAGTAGCATATTTGTTTGTAGA 57.805 36.000 0.00 0.00 0.00 2.59
203 204 7.865706 AAGGGAGTAGCATATTTGTTTGTAG 57.134 36.000 0.00 0.00 0.00 2.74
204 205 7.668052 ACAAAGGGAGTAGCATATTTGTTTGTA 59.332 33.333 0.00 0.00 37.54 2.41
205 206 6.493458 ACAAAGGGAGTAGCATATTTGTTTGT 59.507 34.615 0.00 0.00 37.54 2.83
206 207 6.924111 ACAAAGGGAGTAGCATATTTGTTTG 58.076 36.000 0.00 0.00 37.54 2.93
207 208 8.644374 TTACAAAGGGAGTAGCATATTTGTTT 57.356 30.769 6.45 0.00 40.33 2.83
208 209 8.644374 TTTACAAAGGGAGTAGCATATTTGTT 57.356 30.769 6.45 0.00 40.33 2.83
209 210 7.888546 ACTTTACAAAGGGAGTAGCATATTTGT 59.111 33.333 6.66 6.39 41.97 2.83
210 211 8.281212 ACTTTACAAAGGGAGTAGCATATTTG 57.719 34.615 6.66 0.00 40.31 2.32
211 212 9.969001 TTACTTTACAAAGGGAGTAGCATATTT 57.031 29.630 6.66 0.00 40.31 1.40
212 213 9.392259 GTTACTTTACAAAGGGAGTAGCATATT 57.608 33.333 6.66 0.00 40.31 1.28
213 214 8.769359 AGTTACTTTACAAAGGGAGTAGCATAT 58.231 33.333 6.66 0.00 40.31 1.78
214 215 8.142485 AGTTACTTTACAAAGGGAGTAGCATA 57.858 34.615 6.66 0.00 40.31 3.14
215 216 7.017319 AGTTACTTTACAAAGGGAGTAGCAT 57.983 36.000 6.66 0.00 40.31 3.79
216 217 6.429521 AGTTACTTTACAAAGGGAGTAGCA 57.570 37.500 6.66 0.00 40.31 3.49
217 218 8.837788 TTTAGTTACTTTACAAAGGGAGTAGC 57.162 34.615 6.66 0.00 40.31 3.58
253 254 9.367444 CCTCTGTGAACTAATATAAGACGTTTT 57.633 33.333 0.00 0.00 0.00 2.43
254 255 8.529476 ACCTCTGTGAACTAATATAAGACGTTT 58.471 33.333 0.00 0.00 0.00 3.60
255 256 8.064336 ACCTCTGTGAACTAATATAAGACGTT 57.936 34.615 0.00 0.00 0.00 3.99
256 257 7.642082 ACCTCTGTGAACTAATATAAGACGT 57.358 36.000 0.00 0.00 0.00 4.34
257 258 8.838365 ACTACCTCTGTGAACTAATATAAGACG 58.162 37.037 0.00 0.00 0.00 4.18
307 308 9.357161 ACCTACAACACCAAATTAGTTTCATTA 57.643 29.630 0.00 0.00 0.00 1.90
308 309 8.141268 CACCTACAACACCAAATTAGTTTCATT 58.859 33.333 0.00 0.00 0.00 2.57
309 310 7.286775 ACACCTACAACACCAAATTAGTTTCAT 59.713 33.333 0.00 0.00 0.00 2.57
310 311 6.603997 ACACCTACAACACCAAATTAGTTTCA 59.396 34.615 0.00 0.00 0.00 2.69
311 312 7.034685 ACACCTACAACACCAAATTAGTTTC 57.965 36.000 0.00 0.00 0.00 2.78
312 313 7.262048 CAACACCTACAACACCAAATTAGTTT 58.738 34.615 0.00 0.00 0.00 2.66
313 314 6.183360 CCAACACCTACAACACCAAATTAGTT 60.183 38.462 0.00 0.00 0.00 2.24
314 315 5.300792 CCAACACCTACAACACCAAATTAGT 59.699 40.000 0.00 0.00 0.00 2.24
315 316 5.300792 ACCAACACCTACAACACCAAATTAG 59.699 40.000 0.00 0.00 0.00 1.73
316 317 5.202004 ACCAACACCTACAACACCAAATTA 58.798 37.500 0.00 0.00 0.00 1.40
317 318 4.027437 ACCAACACCTACAACACCAAATT 58.973 39.130 0.00 0.00 0.00 1.82
318 319 3.637769 ACCAACACCTACAACACCAAAT 58.362 40.909 0.00 0.00 0.00 2.32
319 320 3.088789 ACCAACACCTACAACACCAAA 57.911 42.857 0.00 0.00 0.00 3.28
320 321 2.810870 ACCAACACCTACAACACCAA 57.189 45.000 0.00 0.00 0.00 3.67
321 322 2.810870 AACCAACACCTACAACACCA 57.189 45.000 0.00 0.00 0.00 4.17
322 323 7.457024 AAATATAACCAACACCTACAACACC 57.543 36.000 0.00 0.00 0.00 4.16
336 337 8.995220 GCGACCAACTCAATATAAATATAACCA 58.005 33.333 0.00 0.00 0.00 3.67
337 338 8.995220 TGCGACCAACTCAATATAAATATAACC 58.005 33.333 0.00 0.00 0.00 2.85
338 339 9.807386 GTGCGACCAACTCAATATAAATATAAC 57.193 33.333 0.00 0.00 0.00 1.89
339 340 9.772973 AGTGCGACCAACTCAATATAAATATAA 57.227 29.630 0.00 0.00 0.00 0.98
340 341 9.772973 AAGTGCGACCAACTCAATATAAATATA 57.227 29.630 0.00 0.00 0.00 0.86
341 342 8.677148 AAGTGCGACCAACTCAATATAAATAT 57.323 30.769 0.00 0.00 0.00 1.28
342 343 9.602568 TTAAGTGCGACCAACTCAATATAAATA 57.397 29.630 0.00 0.00 0.00 1.40
343 344 8.500753 TTAAGTGCGACCAACTCAATATAAAT 57.499 30.769 0.00 0.00 0.00 1.40
344 345 7.413657 GCTTAAGTGCGACCAACTCAATATAAA 60.414 37.037 4.02 0.00 0.00 1.40
345 346 6.036735 GCTTAAGTGCGACCAACTCAATATAA 59.963 38.462 4.02 0.00 0.00 0.98
346 347 5.522460 GCTTAAGTGCGACCAACTCAATATA 59.478 40.000 4.02 0.00 0.00 0.86
347 348 4.332819 GCTTAAGTGCGACCAACTCAATAT 59.667 41.667 4.02 0.00 0.00 1.28
348 349 3.682858 GCTTAAGTGCGACCAACTCAATA 59.317 43.478 4.02 0.00 0.00 1.90
349 350 2.484264 GCTTAAGTGCGACCAACTCAAT 59.516 45.455 4.02 0.00 0.00 2.57
350 351 1.871039 GCTTAAGTGCGACCAACTCAA 59.129 47.619 4.02 0.00 0.00 3.02
351 352 1.202592 TGCTTAAGTGCGACCAACTCA 60.203 47.619 4.02 0.00 35.36 3.41
352 353 1.194772 GTGCTTAAGTGCGACCAACTC 59.805 52.381 4.02 0.00 35.36 3.01
353 354 1.226746 GTGCTTAAGTGCGACCAACT 58.773 50.000 4.02 0.00 35.36 3.16
354 355 0.941542 TGTGCTTAAGTGCGACCAAC 59.058 50.000 4.02 0.00 35.36 3.77
355 356 1.669604 TTGTGCTTAAGTGCGACCAA 58.330 45.000 4.02 0.00 35.36 3.67
356 357 1.332375 GTTTGTGCTTAAGTGCGACCA 59.668 47.619 4.02 0.00 35.36 4.02
357 358 1.334689 GGTTTGTGCTTAAGTGCGACC 60.335 52.381 4.02 6.27 35.36 4.79
358 359 1.334689 GGGTTTGTGCTTAAGTGCGAC 60.335 52.381 4.02 0.00 35.36 5.19
359 360 0.948678 GGGTTTGTGCTTAAGTGCGA 59.051 50.000 4.02 0.00 35.36 5.10
360 361 0.665835 TGGGTTTGTGCTTAAGTGCG 59.334 50.000 4.02 0.00 35.36 5.34
361 362 2.880963 TTGGGTTTGTGCTTAAGTGC 57.119 45.000 4.02 0.00 0.00 4.40
362 363 4.754322 AGTTTTGGGTTTGTGCTTAAGTG 58.246 39.130 4.02 0.00 0.00 3.16
363 364 5.046950 TGAAGTTTTGGGTTTGTGCTTAAGT 60.047 36.000 4.02 0.00 0.00 2.24
364 365 5.290885 GTGAAGTTTTGGGTTTGTGCTTAAG 59.709 40.000 0.00 0.00 0.00 1.85
365 366 5.172205 GTGAAGTTTTGGGTTTGTGCTTAA 58.828 37.500 0.00 0.00 0.00 1.85
366 367 4.382147 GGTGAAGTTTTGGGTTTGTGCTTA 60.382 41.667 0.00 0.00 0.00 3.09
367 368 3.595173 GTGAAGTTTTGGGTTTGTGCTT 58.405 40.909 0.00 0.00 0.00 3.91
368 369 2.093711 GGTGAAGTTTTGGGTTTGTGCT 60.094 45.455 0.00 0.00 0.00 4.40
369 370 2.276201 GGTGAAGTTTTGGGTTTGTGC 58.724 47.619 0.00 0.00 0.00 4.57
370 371 3.601443 TGGTGAAGTTTTGGGTTTGTG 57.399 42.857 0.00 0.00 0.00 3.33
371 372 4.564613 CCTTTGGTGAAGTTTTGGGTTTGT 60.565 41.667 0.00 0.00 33.29 2.83
372 373 3.938334 CCTTTGGTGAAGTTTTGGGTTTG 59.062 43.478 0.00 0.00 33.29 2.93
373 374 3.054728 CCCTTTGGTGAAGTTTTGGGTTT 60.055 43.478 0.00 0.00 33.29 3.27
374 375 2.503765 CCCTTTGGTGAAGTTTTGGGTT 59.496 45.455 0.00 0.00 33.29 4.11
375 376 2.115427 CCCTTTGGTGAAGTTTTGGGT 58.885 47.619 0.00 0.00 33.29 4.51
376 377 2.115427 ACCCTTTGGTGAAGTTTTGGG 58.885 47.619 0.00 0.00 45.58 4.12
388 389 3.683937 CCCAAGCGCACCCTTTGG 61.684 66.667 16.28 16.28 37.80 3.28
389 390 1.535204 AATCCCAAGCGCACCCTTTG 61.535 55.000 11.47 4.53 0.00 2.77
390 391 0.831711 AAATCCCAAGCGCACCCTTT 60.832 50.000 11.47 0.00 0.00 3.11
391 392 1.228862 AAATCCCAAGCGCACCCTT 60.229 52.632 11.47 0.00 0.00 3.95
392 393 1.978617 CAAATCCCAAGCGCACCCT 60.979 57.895 11.47 0.00 0.00 4.34
393 394 1.937546 CTCAAATCCCAAGCGCACCC 61.938 60.000 11.47 0.00 0.00 4.61
394 395 0.960364 TCTCAAATCCCAAGCGCACC 60.960 55.000 11.47 0.00 0.00 5.01
395 396 0.881118 TTCTCAAATCCCAAGCGCAC 59.119 50.000 11.47 0.00 0.00 5.34
396 397 1.167851 CTTCTCAAATCCCAAGCGCA 58.832 50.000 11.47 0.00 0.00 6.09
397 398 0.453390 CCTTCTCAAATCCCAAGCGC 59.547 55.000 0.00 0.00 0.00 5.92
398 399 2.113860 TCCTTCTCAAATCCCAAGCG 57.886 50.000 0.00 0.00 0.00 4.68
399 400 5.411831 AATTTCCTTCTCAAATCCCAAGC 57.588 39.130 0.00 0.00 0.00 4.01
400 401 8.752187 TCATAAATTTCCTTCTCAAATCCCAAG 58.248 33.333 0.00 0.00 0.00 3.61
401 402 8.663209 TCATAAATTTCCTTCTCAAATCCCAA 57.337 30.769 0.00 0.00 0.00 4.12
402 403 8.663209 TTCATAAATTTCCTTCTCAAATCCCA 57.337 30.769 0.00 0.00 0.00 4.37
441 442 4.413495 TTTCTGTAGCGCGCTAATTTTT 57.587 36.364 39.73 17.34 0.00 1.94
442 443 4.413495 TTTTCTGTAGCGCGCTAATTTT 57.587 36.364 39.73 18.14 0.00 1.82
443 444 4.616181 ATTTTCTGTAGCGCGCTAATTT 57.384 36.364 39.73 18.95 0.00 1.82
444 445 4.318831 GCTATTTTCTGTAGCGCGCTAATT 60.319 41.667 39.73 23.77 35.68 1.40
445 446 3.184581 GCTATTTTCTGTAGCGCGCTAAT 59.815 43.478 39.73 30.53 35.68 1.73
446 447 2.538449 GCTATTTTCTGTAGCGCGCTAA 59.462 45.455 39.73 26.50 35.68 3.09
447 448 2.124903 GCTATTTTCTGTAGCGCGCTA 58.875 47.619 35.48 35.48 35.68 4.26
448 449 0.931005 GCTATTTTCTGTAGCGCGCT 59.069 50.000 38.01 38.01 35.68 5.92
449 450 3.422646 GCTATTTTCTGTAGCGCGC 57.577 52.632 26.66 26.66 35.68 6.86
453 454 0.042100 GCCGCGCTATTTTCTGTAGC 60.042 55.000 5.56 0.00 40.83 3.58
454 455 0.582005 GGCCGCGCTATTTTCTGTAG 59.418 55.000 5.56 0.00 0.00 2.74
455 456 0.812412 GGGCCGCGCTATTTTCTGTA 60.812 55.000 5.56 0.00 0.00 2.74
456 457 2.112815 GGGCCGCGCTATTTTCTGT 61.113 57.895 5.56 0.00 0.00 3.41
457 458 2.715624 GGGCCGCGCTATTTTCTG 59.284 61.111 5.56 0.00 0.00 3.02
458 459 2.516225 GGGGCCGCGCTATTTTCT 60.516 61.111 3.09 0.00 0.00 2.52
459 460 2.516225 AGGGGCCGCGCTATTTTC 60.516 61.111 15.00 0.00 0.00 2.29
460 461 2.828549 CAGGGGCCGCGCTATTTT 60.829 61.111 15.00 0.00 0.00 1.82
461 462 2.830186 TTTCAGGGGCCGCGCTATTT 62.830 55.000 15.00 0.00 0.00 1.40
462 463 2.830186 TTTTCAGGGGCCGCGCTATT 62.830 55.000 15.00 0.00 0.00 1.73
463 464 2.624674 ATTTTCAGGGGCCGCGCTAT 62.625 55.000 15.00 2.36 0.00 2.97
464 465 1.973816 TATTTTCAGGGGCCGCGCTA 61.974 55.000 15.00 0.55 0.00 4.26
465 466 2.624674 ATATTTTCAGGGGCCGCGCT 62.625 55.000 15.00 0.00 0.00 5.92
466 467 2.193536 ATATTTTCAGGGGCCGCGC 61.194 57.895 15.00 0.00 0.00 6.86
467 468 1.654220 CATATTTTCAGGGGCCGCG 59.346 57.895 15.00 9.64 0.00 6.46
468 469 1.109323 AGCATATTTTCAGGGGCCGC 61.109 55.000 12.88 12.88 0.00 6.53
469 470 2.270352 TAGCATATTTTCAGGGGCCG 57.730 50.000 0.00 0.00 0.00 6.13
470 471 4.158579 GCTAATAGCATATTTTCAGGGGCC 59.841 45.833 7.49 0.00 41.89 5.80
471 472 4.142600 CGCTAATAGCATATTTTCAGGGGC 60.143 45.833 13.15 0.00 42.58 5.80
472 473 5.003804 ACGCTAATAGCATATTTTCAGGGG 58.996 41.667 13.15 0.00 42.58 4.79
473 474 5.617751 GCACGCTAATAGCATATTTTCAGGG 60.618 44.000 13.15 0.00 42.58 4.45
474 475 5.180117 AGCACGCTAATAGCATATTTTCAGG 59.820 40.000 13.15 0.00 42.58 3.86
475 476 6.233430 AGCACGCTAATAGCATATTTTCAG 57.767 37.500 13.15 0.00 42.58 3.02
476 477 7.905604 ATAGCACGCTAATAGCATATTTTCA 57.094 32.000 13.15 0.00 42.58 2.69
477 478 8.058915 GCTATAGCACGCTAATAGCATATTTTC 58.941 37.037 20.01 0.00 40.38 2.29
478 479 7.254117 CGCTATAGCACGCTAATAGCATATTTT 60.254 37.037 23.99 0.00 40.58 1.82
479 480 6.199154 CGCTATAGCACGCTAATAGCATATTT 59.801 38.462 23.99 0.00 40.58 1.40
480 481 5.687730 CGCTATAGCACGCTAATAGCATATT 59.312 40.000 23.99 0.00 40.58 1.28
481 482 5.215903 CGCTATAGCACGCTAATAGCATAT 58.784 41.667 23.99 7.17 40.58 1.78
482 483 4.095932 ACGCTATAGCACGCTAATAGCATA 59.904 41.667 23.99 1.56 40.58 3.14
483 484 3.119459 ACGCTATAGCACGCTAATAGCAT 60.119 43.478 23.99 15.58 40.58 3.79
484 485 2.228103 ACGCTATAGCACGCTAATAGCA 59.772 45.455 23.99 0.00 40.58 3.49
485 486 2.847133 GACGCTATAGCACGCTAATAGC 59.153 50.000 23.99 19.62 42.21 2.97
486 487 4.336101 GAGACGCTATAGCACGCTAATAG 58.664 47.826 23.99 7.18 42.21 1.73
487 488 3.181523 CGAGACGCTATAGCACGCTAATA 60.182 47.826 23.99 0.00 42.21 0.98
488 489 2.412977 CGAGACGCTATAGCACGCTAAT 60.413 50.000 23.99 2.73 42.21 1.73
489 490 1.070108 CGAGACGCTATAGCACGCTAA 60.070 52.381 23.99 0.00 42.21 3.09
490 491 0.511653 CGAGACGCTATAGCACGCTA 59.488 55.000 23.99 0.39 42.21 4.26
491 492 1.280142 CGAGACGCTATAGCACGCT 59.720 57.895 23.99 16.43 42.21 5.07
492 493 1.009900 ACGAGACGCTATAGCACGC 60.010 57.895 23.99 16.54 42.21 5.34
493 494 1.262824 GCACGAGACGCTATAGCACG 61.263 60.000 23.99 21.94 42.21 5.34
494 495 0.029567 AGCACGAGACGCTATAGCAC 59.970 55.000 23.99 16.39 42.21 4.40
495 496 1.263484 GTAGCACGAGACGCTATAGCA 59.737 52.381 23.99 0.00 43.50 3.49
496 497 1.263484 TGTAGCACGAGACGCTATAGC 59.737 52.381 15.09 15.09 43.50 2.97
497 498 3.289911 GTTGTAGCACGAGACGCTATAG 58.710 50.000 0.00 0.00 43.50 1.31
498 499 2.286008 CGTTGTAGCACGAGACGCTATA 60.286 50.000 0.00 0.00 43.50 1.31
499 500 1.531264 CGTTGTAGCACGAGACGCTAT 60.531 52.381 0.00 0.00 43.50 2.97
500 501 0.179207 CGTTGTAGCACGAGACGCTA 60.179 55.000 0.00 0.00 43.15 4.26
501 502 1.442184 CGTTGTAGCACGAGACGCT 60.442 57.895 0.00 0.00 43.15 5.07
502 503 1.728426 ACGTTGTAGCACGAGACGC 60.728 57.895 0.90 0.00 43.15 5.19
503 504 1.930816 GCACGTTGTAGCACGAGACG 61.931 60.000 0.90 0.06 43.15 4.18
504 505 1.615107 GGCACGTTGTAGCACGAGAC 61.615 60.000 0.90 0.00 43.15 3.36
505 506 1.372499 GGCACGTTGTAGCACGAGA 60.372 57.895 0.90 0.00 43.15 4.04
506 507 1.617755 CTGGCACGTTGTAGCACGAG 61.618 60.000 0.90 0.00 43.15 4.18
507 508 1.663388 CTGGCACGTTGTAGCACGA 60.663 57.895 0.90 0.00 43.15 4.35
508 509 2.667318 CCTGGCACGTTGTAGCACG 61.667 63.158 0.00 0.00 46.04 5.34
509 510 1.301401 TCCTGGCACGTTGTAGCAC 60.301 57.895 0.00 0.00 0.00 4.40
510 511 1.301401 GTCCTGGCACGTTGTAGCA 60.301 57.895 0.00 0.00 0.00 3.49
511 512 2.380410 CGTCCTGGCACGTTGTAGC 61.380 63.158 9.54 0.00 34.95 3.58
512 513 1.736645 CCGTCCTGGCACGTTGTAG 60.737 63.158 14.47 0.00 38.14 2.74
513 514 2.149803 CTCCGTCCTGGCACGTTGTA 62.150 60.000 14.47 1.50 38.14 2.41
514 515 3.515316 CTCCGTCCTGGCACGTTGT 62.515 63.158 14.47 0.00 38.14 3.32
515 516 2.738521 CTCCGTCCTGGCACGTTG 60.739 66.667 14.47 6.10 38.14 4.10
516 517 4.003788 CCTCCGTCCTGGCACGTT 62.004 66.667 14.47 0.00 38.14 3.99
517 518 3.873679 TACCTCCGTCCTGGCACGT 62.874 63.158 14.47 0.00 38.14 4.49
518 519 3.064987 CTACCTCCGTCCTGGCACG 62.065 68.421 10.44 10.44 39.61 5.34
519 520 0.682209 TACTACCTCCGTCCTGGCAC 60.682 60.000 0.00 0.00 37.80 5.01
520 521 0.040058 TTACTACCTCCGTCCTGGCA 59.960 55.000 0.00 0.00 37.80 4.92
521 522 0.745468 CTTACTACCTCCGTCCTGGC 59.255 60.000 0.00 0.00 37.80 4.85
522 523 2.140839 ACTTACTACCTCCGTCCTGG 57.859 55.000 0.00 0.00 40.09 4.45
523 524 6.060788 AGTAATACTTACTACCTCCGTCCTG 58.939 44.000 0.00 0.00 44.30 3.86
524 525 6.259346 AGTAATACTTACTACCTCCGTCCT 57.741 41.667 0.00 0.00 44.30 3.85
525 526 6.951062 AAGTAATACTTACTACCTCCGTCC 57.049 41.667 3.48 0.00 45.33 4.79
527 528 9.508642 GGTATAAGTAATACTTACTACCTCCGT 57.491 37.037 24.84 10.76 45.33 4.69
528 529 8.660373 CGGTATAAGTAATACTTACTACCTCCG 58.340 40.741 26.60 21.83 45.33 4.63
529 530 9.726438 TCGGTATAAGTAATACTTACTACCTCC 57.274 37.037 26.60 17.77 45.33 4.30
543 544 9.461312 TGTAGAGTTAACCTTCGGTATAAGTAA 57.539 33.333 0.88 0.00 33.12 2.24
544 545 8.893727 GTGTAGAGTTAACCTTCGGTATAAGTA 58.106 37.037 0.88 0.00 33.12 2.24
545 546 7.613411 AGTGTAGAGTTAACCTTCGGTATAAGT 59.387 37.037 0.88 0.00 33.12 2.24
546 547 7.994194 AGTGTAGAGTTAACCTTCGGTATAAG 58.006 38.462 0.88 0.00 33.12 1.73
547 548 7.201644 CGAGTGTAGAGTTAACCTTCGGTATAA 60.202 40.741 0.88 0.00 33.12 0.98
548 549 6.258727 CGAGTGTAGAGTTAACCTTCGGTATA 59.741 42.308 0.88 0.00 33.12 1.47
549 550 5.065731 CGAGTGTAGAGTTAACCTTCGGTAT 59.934 44.000 0.88 0.00 33.12 2.73
550 551 4.393062 CGAGTGTAGAGTTAACCTTCGGTA 59.607 45.833 0.88 0.00 33.12 4.02
551 552 3.190118 CGAGTGTAGAGTTAACCTTCGGT 59.810 47.826 0.88 0.00 37.65 4.69
552 553 3.190118 ACGAGTGTAGAGTTAACCTTCGG 59.810 47.826 0.88 0.00 0.00 4.30
553 554 4.083643 TGACGAGTGTAGAGTTAACCTTCG 60.084 45.833 0.88 7.87 0.00 3.79
554 555 5.048852 ACTGACGAGTGTAGAGTTAACCTTC 60.049 44.000 0.88 0.00 0.00 3.46
555 556 4.826183 ACTGACGAGTGTAGAGTTAACCTT 59.174 41.667 0.88 0.00 0.00 3.50
556 557 4.215827 CACTGACGAGTGTAGAGTTAACCT 59.784 45.833 0.88 2.01 44.15 3.50
557 558 4.474113 CACTGACGAGTGTAGAGTTAACC 58.526 47.826 0.88 0.00 44.15 2.85
574 575 4.831674 ATCACTGATTGGTCATCACTGA 57.168 40.909 0.00 0.00 38.41 3.41
575 576 5.876460 TGTTATCACTGATTGGTCATCACTG 59.124 40.000 0.00 0.00 36.94 3.66
576 577 6.053632 TGTTATCACTGATTGGTCATCACT 57.946 37.500 0.00 0.00 36.94 3.41
577 578 6.741992 TTGTTATCACTGATTGGTCATCAC 57.258 37.500 0.00 0.00 36.94 3.06
578 579 7.943079 AATTGTTATCACTGATTGGTCATCA 57.057 32.000 0.00 0.00 39.82 3.07
579 580 9.294030 GAAAATTGTTATCACTGATTGGTCATC 57.706 33.333 0.00 0.00 32.98 2.92
580 581 9.028284 AGAAAATTGTTATCACTGATTGGTCAT 57.972 29.630 0.00 0.00 32.98 3.06
581 582 8.408043 AGAAAATTGTTATCACTGATTGGTCA 57.592 30.769 0.00 0.00 0.00 4.02
607 608 8.626526 ACTGTTACCACGTTCTCAATTATTTTT 58.373 29.630 0.00 0.00 0.00 1.94
608 609 8.161699 ACTGTTACCACGTTCTCAATTATTTT 57.838 30.769 0.00 0.00 0.00 1.82
609 610 7.739498 ACTGTTACCACGTTCTCAATTATTT 57.261 32.000 0.00 0.00 0.00 1.40
610 611 7.739498 AACTGTTACCACGTTCTCAATTATT 57.261 32.000 0.00 0.00 0.00 1.40
611 612 7.739498 AAACTGTTACCACGTTCTCAATTAT 57.261 32.000 0.00 0.00 0.00 1.28
612 613 7.496591 AGAAAACTGTTACCACGTTCTCAATTA 59.503 33.333 0.00 0.00 0.00 1.40
613 614 6.317893 AGAAAACTGTTACCACGTTCTCAATT 59.682 34.615 0.00 0.00 0.00 2.32
614 615 5.820947 AGAAAACTGTTACCACGTTCTCAAT 59.179 36.000 0.00 0.00 0.00 2.57
615 616 5.180271 AGAAAACTGTTACCACGTTCTCAA 58.820 37.500 0.00 0.00 0.00 3.02
616 617 4.761975 AGAAAACTGTTACCACGTTCTCA 58.238 39.130 0.00 0.00 0.00 3.27
617 618 5.404667 CCTAGAAAACTGTTACCACGTTCTC 59.595 44.000 6.26 0.00 0.00 2.87
618 619 5.295152 CCTAGAAAACTGTTACCACGTTCT 58.705 41.667 7.72 7.72 0.00 3.01
619 620 4.450080 CCCTAGAAAACTGTTACCACGTTC 59.550 45.833 0.00 0.00 0.00 3.95
620 621 4.383173 CCCTAGAAAACTGTTACCACGTT 58.617 43.478 0.00 0.00 0.00 3.99
621 622 3.244318 CCCCTAGAAAACTGTTACCACGT 60.244 47.826 0.00 0.00 0.00 4.49
622 623 3.244318 ACCCCTAGAAAACTGTTACCACG 60.244 47.826 0.00 0.00 0.00 4.94
623 624 4.362470 ACCCCTAGAAAACTGTTACCAC 57.638 45.455 0.00 0.00 0.00 4.16
624 625 5.391577 AAACCCCTAGAAAACTGTTACCA 57.608 39.130 0.00 0.00 0.00 3.25
625 626 6.066690 AGAAAACCCCTAGAAAACTGTTACC 58.933 40.000 0.00 0.00 0.00 2.85
626 627 8.152898 TCTAGAAAACCCCTAGAAAACTGTTAC 58.847 37.037 0.00 0.00 39.51 2.50
627 628 8.266363 TCTAGAAAACCCCTAGAAAACTGTTA 57.734 34.615 0.00 0.00 39.51 2.41
628 629 7.145474 TCTAGAAAACCCCTAGAAAACTGTT 57.855 36.000 0.00 0.00 39.51 3.16
629 630 6.758806 TCTAGAAAACCCCTAGAAAACTGT 57.241 37.500 0.00 0.00 39.51 3.55
635 636 6.100714 ACTGTTGTTCTAGAAAACCCCTAGAA 59.899 38.462 6.78 8.13 45.65 2.10
636 637 5.605488 ACTGTTGTTCTAGAAAACCCCTAGA 59.395 40.000 6.78 0.00 40.40 2.43
637 638 5.866207 ACTGTTGTTCTAGAAAACCCCTAG 58.134 41.667 6.78 9.40 35.97 3.02
638 639 5.899631 ACTGTTGTTCTAGAAAACCCCTA 57.100 39.130 6.78 0.00 0.00 3.53
639 640 4.790718 ACTGTTGTTCTAGAAAACCCCT 57.209 40.909 6.78 0.00 0.00 4.79
640 641 5.847111 AAACTGTTGTTCTAGAAAACCCC 57.153 39.130 6.78 0.00 34.96 4.95
641 642 6.096423 AGGAAAACTGTTGTTCTAGAAAACCC 59.904 38.462 6.78 9.07 34.96 4.11
642 643 7.096884 AGGAAAACTGTTGTTCTAGAAAACC 57.903 36.000 6.78 0.00 34.96 3.27
643 644 8.459635 AGAAGGAAAACTGTTGTTCTAGAAAAC 58.540 33.333 6.78 13.54 34.96 2.43
644 645 8.575649 AGAAGGAAAACTGTTGTTCTAGAAAA 57.424 30.769 6.78 0.00 34.96 2.29
645 646 8.575649 AAGAAGGAAAACTGTTGTTCTAGAAA 57.424 30.769 6.78 0.00 34.96 2.52
646 647 8.575649 AAAGAAGGAAAACTGTTGTTCTAGAA 57.424 30.769 0.00 0.00 34.96 2.10
647 648 8.575649 AAAAGAAGGAAAACTGTTGTTCTAGA 57.424 30.769 0.00 0.00 34.96 2.43
670 671 6.351456 CCTGGAAAACTGTTTGTCCCTAAAAA 60.351 38.462 21.16 9.13 0.00 1.94
671 672 5.128008 CCTGGAAAACTGTTTGTCCCTAAAA 59.872 40.000 21.16 9.58 0.00 1.52
672 673 4.647399 CCTGGAAAACTGTTTGTCCCTAAA 59.353 41.667 21.16 9.81 0.00 1.85
673 674 4.211920 CCTGGAAAACTGTTTGTCCCTAA 58.788 43.478 21.16 10.03 0.00 2.69
674 675 3.203487 ACCTGGAAAACTGTTTGTCCCTA 59.797 43.478 21.16 10.49 0.00 3.53
675 676 2.024369 ACCTGGAAAACTGTTTGTCCCT 60.024 45.455 21.16 3.87 0.00 4.20
676 677 2.384828 ACCTGGAAAACTGTTTGTCCC 58.615 47.619 21.16 16.38 0.00 4.46
677 678 4.465632 AAACCTGGAAAACTGTTTGTCC 57.534 40.909 19.03 19.03 0.00 4.02
701 702 9.131791 GCTAATTCTCACCAATTCCCTAAAATA 57.868 33.333 0.00 0.00 0.00 1.40
702 703 7.619302 TGCTAATTCTCACCAATTCCCTAAAAT 59.381 33.333 0.00 0.00 0.00 1.82
703 704 6.951198 TGCTAATTCTCACCAATTCCCTAAAA 59.049 34.615 0.00 0.00 0.00 1.52
704 705 6.489603 TGCTAATTCTCACCAATTCCCTAAA 58.510 36.000 0.00 0.00 0.00 1.85
705 706 6.069673 TCTGCTAATTCTCACCAATTCCCTAA 60.070 38.462 0.00 0.00 0.00 2.69
706 707 5.428457 TCTGCTAATTCTCACCAATTCCCTA 59.572 40.000 0.00 0.00 0.00 3.53
707 708 4.228210 TCTGCTAATTCTCACCAATTCCCT 59.772 41.667 0.00 0.00 0.00 4.20
708 709 4.526970 TCTGCTAATTCTCACCAATTCCC 58.473 43.478 0.00 0.00 0.00 3.97
709 710 5.431765 TCTCTGCTAATTCTCACCAATTCC 58.568 41.667 0.00 0.00 0.00 3.01
710 711 6.017275 CCATCTCTGCTAATTCTCACCAATTC 60.017 42.308 0.00 0.00 0.00 2.17
711 712 5.826737 CCATCTCTGCTAATTCTCACCAATT 59.173 40.000 0.00 0.00 0.00 2.32
712 713 5.374921 CCATCTCTGCTAATTCTCACCAAT 58.625 41.667 0.00 0.00 0.00 3.16
713 714 4.384537 CCCATCTCTGCTAATTCTCACCAA 60.385 45.833 0.00 0.00 0.00 3.67
714 715 3.135348 CCCATCTCTGCTAATTCTCACCA 59.865 47.826 0.00 0.00 0.00 4.17
715 716 3.737850 CCCATCTCTGCTAATTCTCACC 58.262 50.000 0.00 0.00 0.00 4.02
716 717 3.137533 GCCCATCTCTGCTAATTCTCAC 58.862 50.000 0.00 0.00 0.00 3.51
717 718 3.044156 AGCCCATCTCTGCTAATTCTCA 58.956 45.455 0.00 0.00 35.69 3.27
718 719 3.401182 CAGCCCATCTCTGCTAATTCTC 58.599 50.000 0.00 0.00 35.69 2.87
719 720 3.488778 CAGCCCATCTCTGCTAATTCT 57.511 47.619 0.00 0.00 35.69 2.40
732 733 1.703014 ATCGGACAGATGCAGCCCAT 61.703 55.000 0.00 0.00 38.36 4.00
733 734 2.315781 GATCGGACAGATGCAGCCCA 62.316 60.000 0.00 0.00 40.26 5.36
734 735 1.596477 GATCGGACAGATGCAGCCC 60.596 63.158 0.00 0.00 40.26 5.19
735 736 1.596477 GGATCGGACAGATGCAGCC 60.596 63.158 0.00 0.00 45.64 4.85
736 737 4.040068 GGATCGGACAGATGCAGC 57.960 61.111 0.00 0.00 45.64 5.25
739 740 1.369321 GGAGGGATCGGACAGATGC 59.631 63.158 0.00 0.00 45.62 3.91
740 741 1.662608 CGGAGGGATCGGACAGATG 59.337 63.158 0.00 0.00 40.26 2.90
741 742 2.203771 GCGGAGGGATCGGACAGAT 61.204 63.158 0.00 0.00 43.51 2.90
742 743 2.833582 GCGGAGGGATCGGACAGA 60.834 66.667 0.00 0.00 0.00 3.41
743 744 3.917760 GGCGGAGGGATCGGACAG 61.918 72.222 0.00 0.00 0.00 3.51
744 745 4.770362 TGGCGGAGGGATCGGACA 62.770 66.667 0.00 0.00 0.00 4.02
745 746 3.917760 CTGGCGGAGGGATCGGAC 61.918 72.222 0.00 0.00 0.00 4.79
767 768 3.428282 CTACCGGCCCGTTGTTGC 61.428 66.667 0.00 0.00 0.00 4.17
780 781 1.612462 GGGCCGGTATAATTGCCTACC 60.612 57.143 1.90 3.63 43.50 3.18
781 782 1.817357 GGGCCGGTATAATTGCCTAC 58.183 55.000 1.90 0.00 43.50 3.18
782 783 0.322322 CGGGCCGGTATAATTGCCTA 59.678 55.000 20.56 0.00 43.50 3.93
783 784 1.072505 CGGGCCGGTATAATTGCCT 59.927 57.895 20.56 0.00 43.50 4.75
784 785 2.622962 GCGGGCCGGTATAATTGCC 61.623 63.158 29.48 2.10 43.26 4.52
785 786 2.951458 GCGGGCCGGTATAATTGC 59.049 61.111 29.48 2.82 0.00 3.56
805 806 0.180406 GTGGACTGACTGGTGGTTGT 59.820 55.000 0.00 0.00 0.00 3.32
828 829 4.143333 ATCCGCTTGGGTCGGTCG 62.143 66.667 1.22 0.00 46.49 4.79
829 830 2.202892 GATCCGCTTGGGTCGGTC 60.203 66.667 1.22 0.00 46.49 4.79
856 857 0.109342 GATGTGATGTAGCCAGGGGG 59.891 60.000 0.00 0.00 37.18 5.40
954 961 1.340248 GTGGGTTGACTCTTGACTCGA 59.660 52.381 0.00 0.00 0.00 4.04
964 971 2.923837 GGTGGGTGTGGGTTGACT 59.076 61.111 0.00 0.00 0.00 3.41
993 1006 3.550431 CCGGCTCCCATGGTCGAT 61.550 66.667 11.73 0.00 0.00 3.59
1240 1481 2.871099 CTTCTGCTGCTGCTGCTG 59.129 61.111 27.67 26.32 40.48 4.41
1241 1482 3.056938 GCTTCTGCTGCTGCTGCT 61.057 61.111 27.67 0.00 40.48 4.24
1242 1483 3.329688 CTGCTTCTGCTGCTGCTGC 62.330 63.158 22.51 22.51 40.48 5.25
1243 1484 2.871099 CTGCTTCTGCTGCTGCTG 59.129 61.111 17.00 15.94 40.48 4.41
1329 1574 1.797635 GCATCGGAGATAAGCAAGAGC 59.202 52.381 0.00 0.00 45.12 4.09
1340 1585 3.531538 GACCAAACATAAGCATCGGAGA 58.468 45.455 0.00 0.00 45.75 3.71
1364 1609 2.236382 GCAAGAGCTCCTCGCATCG 61.236 63.158 10.93 0.00 42.61 3.84
1368 1613 0.376502 GATTTGCAAGAGCTCCTCGC 59.623 55.000 10.93 11.33 42.74 5.03
1379 1624 6.149973 ACTTCTGAATTCTGATCGATTTGCAA 59.850 34.615 14.89 0.00 0.00 4.08
1407 1730 1.994779 GCACGCAGATTTTTGGATTGG 59.005 47.619 0.00 0.00 0.00 3.16
1409 1732 3.056678 TCATGCACGCAGATTTTTGGATT 60.057 39.130 0.00 0.00 0.00 3.01
1418 1741 1.753930 TTTGGATCATGCACGCAGAT 58.246 45.000 0.00 1.09 0.00 2.90
1421 1744 2.230750 TCAAATTTGGATCATGCACGCA 59.769 40.909 17.90 0.00 0.00 5.24
1422 1745 2.878580 TCAAATTTGGATCATGCACGC 58.121 42.857 17.90 0.00 0.00 5.34
1423 1746 4.090354 GTGTTCAAATTTGGATCATGCACG 59.910 41.667 17.90 0.00 0.00 5.34
1424 1747 5.232463 AGTGTTCAAATTTGGATCATGCAC 58.768 37.500 17.90 12.59 0.00 4.57
1425 1748 5.471556 AGTGTTCAAATTTGGATCATGCA 57.528 34.783 17.90 0.57 0.00 3.96
1440 1763 1.333619 GCAGAAAAAGGCGAGTGTTCA 59.666 47.619 0.00 0.00 0.00 3.18
1441 1764 1.604278 AGCAGAAAAAGGCGAGTGTTC 59.396 47.619 0.00 0.00 34.54 3.18
1443 1766 1.230324 GAGCAGAAAAAGGCGAGTGT 58.770 50.000 0.00 0.00 34.54 3.55
1449 1772 0.803117 GTACCCGAGCAGAAAAAGGC 59.197 55.000 0.00 0.00 0.00 4.35
1456 1779 3.491208 GGACTAGTACCCGAGCAGA 57.509 57.895 0.00 0.00 0.00 4.26
1462 1785 1.709147 CGTCACCGGACTAGTACCCG 61.709 65.000 9.46 14.51 42.05 5.28
1463 1786 0.392998 TCGTCACCGGACTAGTACCC 60.393 60.000 9.46 0.00 42.05 3.69
1466 1789 3.614092 AGAATTCGTCACCGGACTAGTA 58.386 45.455 9.46 0.00 42.05 1.82
1467 1790 2.444421 AGAATTCGTCACCGGACTAGT 58.556 47.619 9.46 0.00 42.05 2.57
1468 1791 3.875727 TCTAGAATTCGTCACCGGACTAG 59.124 47.826 9.46 6.74 42.05 2.57
1475 1798 6.984474 TCCATTTACATCTAGAATTCGTCACC 59.016 38.462 0.00 0.00 0.00 4.02
1477 1800 6.984474 GGTCCATTTACATCTAGAATTCGTCA 59.016 38.462 0.00 0.00 0.00 4.35
1490 1813 4.881157 AAAGCCTAGGGTCCATTTACAT 57.119 40.909 15.24 0.00 0.00 2.29
1515 1838 9.160496 AGTTGATGAATTCTAGTTCAGCTAAAG 57.840 33.333 7.05 0.00 43.10 1.85
1517 1840 7.489435 CGAGTTGATGAATTCTAGTTCAGCTAA 59.511 37.037 7.05 3.77 43.10 3.09
1518 1841 6.975197 CGAGTTGATGAATTCTAGTTCAGCTA 59.025 38.462 7.05 3.09 43.10 3.32
1519 1842 5.809562 CGAGTTGATGAATTCTAGTTCAGCT 59.190 40.000 7.05 11.02 43.10 4.24
1520 1843 5.501574 GCGAGTTGATGAATTCTAGTTCAGC 60.502 44.000 7.05 4.79 43.02 4.26
1521 1844 5.006165 GGCGAGTTGATGAATTCTAGTTCAG 59.994 44.000 7.05 0.00 41.05 3.02
1522 1845 4.870426 GGCGAGTTGATGAATTCTAGTTCA 59.130 41.667 7.05 0.00 41.88 3.18
1523 1846 5.006165 CAGGCGAGTTGATGAATTCTAGTTC 59.994 44.000 7.05 0.00 0.00 3.01
1533 1859 1.833630 AGAATCCAGGCGAGTTGATGA 59.166 47.619 0.00 0.00 0.00 2.92
1543 1869 1.859080 CGTTTAGCGTAGAATCCAGGC 59.141 52.381 0.00 0.00 35.54 4.85
1555 1884 1.209128 CATCAGTAGCCCGTTTAGCG 58.791 55.000 0.00 0.00 40.95 4.26
1572 1901 7.680730 AGTATCTAGTGTTCCAGTTGAAACAT 58.319 34.615 0.00 0.00 33.94 2.71
1578 1907 9.517609 GTACATAAGTATCTAGTGTTCCAGTTG 57.482 37.037 0.00 0.00 31.84 3.16
1609 1938 9.817809 CTTGTTATGTTAGACTAAAGGAGCATA 57.182 33.333 0.00 0.00 0.00 3.14
1622 1954 6.092944 CGCCACAAATACCTTGTTATGTTAGA 59.907 38.462 0.00 0.00 46.49 2.10
1629 1961 3.741249 TGTCGCCACAAATACCTTGTTA 58.259 40.909 0.00 0.00 46.49 2.41
1630 1962 2.577700 TGTCGCCACAAATACCTTGTT 58.422 42.857 0.00 0.00 46.49 2.83
1633 1965 3.613910 GCAATTGTCGCCACAAATACCTT 60.614 43.478 7.40 0.00 45.78 3.50
1634 1966 2.094752 GCAATTGTCGCCACAAATACCT 60.095 45.455 7.40 0.00 45.78 3.08
1643 1979 2.679934 CGCTCTGCAATTGTCGCCA 61.680 57.895 7.40 0.00 0.00 5.69
1647 1983 0.445436 CAGTCCGCTCTGCAATTGTC 59.555 55.000 7.40 0.07 0.00 3.18
1656 1992 0.456221 CCGATGTAACAGTCCGCTCT 59.544 55.000 0.00 0.00 0.00 4.09
1664 2000 5.464722 CCAATGATTCTCTCCGATGTAACAG 59.535 44.000 0.00 0.00 0.00 3.16
1675 2011 2.208431 CACGCTCCCAATGATTCTCTC 58.792 52.381 0.00 0.00 0.00 3.20
1683 2019 1.204704 TGTCTCTACACGCTCCCAATG 59.795 52.381 0.00 0.00 0.00 2.82
1684 2020 1.557099 TGTCTCTACACGCTCCCAAT 58.443 50.000 0.00 0.00 0.00 3.16
1711 2055 8.196771 TGAATTCAGCACACTAAGAATTTGTTT 58.803 29.630 3.38 0.00 39.88 2.83
1747 2091 7.547227 ACTGCAATAACCTTCCAAACATTATC 58.453 34.615 0.00 0.00 0.00 1.75
1852 2196 6.382859 TGTGATTCTAGGCACCTATCTGTTTA 59.617 38.462 0.00 0.00 34.19 2.01
1907 2251 4.220602 CCTTCTGTTGATCGGGGAAAAATT 59.779 41.667 0.00 0.00 0.00 1.82
1914 2258 0.462759 GAGCCTTCTGTTGATCGGGG 60.463 60.000 0.00 0.00 0.00 5.73
1927 2273 2.665603 GAACCAGGAGCGAGCCTT 59.334 61.111 0.00 0.00 35.66 4.35
1930 2276 1.522580 GATGGAACCAGGAGCGAGC 60.523 63.158 0.00 0.00 0.00 5.03
1965 2311 1.897133 ACCTGACGCTGTATGTTGGTA 59.103 47.619 0.00 0.00 0.00 3.25
2019 2382 1.238439 CTTTGCCGTGTTGGTGAGAT 58.762 50.000 0.00 0.00 41.21 2.75
2020 2383 0.817634 CCTTTGCCGTGTTGGTGAGA 60.818 55.000 0.00 0.00 41.21 3.27
2045 2408 4.783227 AGGTCCTTTGGTAATTGCTCTAGA 59.217 41.667 0.00 0.00 0.00 2.43
2070 2433 6.382869 AGATGGTAATTATGTTCTTGCTGC 57.617 37.500 0.00 0.00 0.00 5.25
2082 2445 6.489022 TCTCGCTACTGCTTAGATGGTAATTA 59.511 38.462 0.00 0.00 36.97 1.40
2085 2448 4.036498 GTCTCGCTACTGCTTAGATGGTAA 59.964 45.833 0.00 0.00 36.97 2.85
2089 2452 2.359214 TGGTCTCGCTACTGCTTAGATG 59.641 50.000 0.00 0.00 36.97 2.90
2090 2453 2.621055 CTGGTCTCGCTACTGCTTAGAT 59.379 50.000 0.00 0.00 36.97 1.98
2091 2454 2.017782 CTGGTCTCGCTACTGCTTAGA 58.982 52.381 0.00 0.00 36.97 2.10
2093 2456 2.124277 TCTGGTCTCGCTACTGCTTA 57.876 50.000 0.00 0.00 36.97 3.09
2094 2457 1.407258 GATCTGGTCTCGCTACTGCTT 59.593 52.381 0.00 0.00 36.97 3.91
2095 2458 1.028905 GATCTGGTCTCGCTACTGCT 58.971 55.000 0.00 0.00 36.97 4.24
2096 2459 0.741326 TGATCTGGTCTCGCTACTGC 59.259 55.000 0.00 0.00 0.00 4.40
2097 2460 2.020720 AGTGATCTGGTCTCGCTACTG 58.979 52.381 0.00 0.00 31.90 2.74
2102 2468 2.094494 TGAAGAAGTGATCTGGTCTCGC 60.094 50.000 0.00 0.00 38.79 5.03
2148 2514 3.326588 TGTGTTCAGGGTGTAACTAGCAT 59.673 43.478 0.00 0.00 36.74 3.79
2149 2515 2.701423 TGTGTTCAGGGTGTAACTAGCA 59.299 45.455 0.00 0.00 36.74 3.49
2204 2570 3.181498 GGAGCTACTTCGTTGGAGTACTC 60.181 52.174 14.87 14.87 0.00 2.59
2205 2571 2.754002 GGAGCTACTTCGTTGGAGTACT 59.246 50.000 0.00 0.00 0.00 2.73
2214 2580 1.557099 TCATGTGGGAGCTACTTCGT 58.443 50.000 0.00 0.00 0.00 3.85
2255 2621 5.427806 AGAGAATGATGGACTCATCCTGAAA 59.572 40.000 4.22 0.00 46.92 2.69
2256 2622 4.967442 AGAGAATGATGGACTCATCCTGAA 59.033 41.667 4.22 0.00 46.92 3.02
2263 2629 2.100418 CGCAGAGAGAATGATGGACTCA 59.900 50.000 0.00 0.00 38.53 3.41
2275 2641 0.737804 GACTGATCTGCGCAGAGAGA 59.262 55.000 37.26 26.49 41.33 3.10
2300 2666 2.359230 GGTCACCACTGGAGCTGC 60.359 66.667 0.71 0.00 0.00 5.25
2377 2743 1.145571 AGTGGACTGGGCAAAACCTA 58.854 50.000 0.00 0.00 39.10 3.08
2448 2814 7.148086 TGCAGAAATGCCTTAGTATTTAACAGG 60.148 37.037 0.00 0.00 38.27 4.00
2487 2853 2.945008 TGTTTCTTCTGCAGTTCTGTGG 59.055 45.455 14.67 0.00 0.00 4.17
2677 3051 2.717639 GCCTAGCCAAATCTCTGGAA 57.282 50.000 0.00 0.00 38.96 3.53
2934 3308 4.320788 CCAGCAAGAGAATGGAACTTTGTC 60.321 45.833 0.00 0.00 36.09 3.18
3017 3392 1.192428 ACCCGGACACAGATTAGGAC 58.808 55.000 0.73 0.00 0.00 3.85
3115 3490 9.719355 TTCTATGTGAAATCTTAACAGTAGCAA 57.281 29.630 0.00 0.00 0.00 3.91
3202 3585 5.559035 GCACCTAAGTATATGCTTTTGAGCG 60.559 44.000 11.50 1.39 37.69 5.03
3220 3613 4.188247 CTGTAAGTGTAAGCAGCACCTA 57.812 45.455 0.00 0.00 37.56 3.08
3291 3684 7.566760 TCTATGTTGAAAGAGCTTTTGTCAA 57.433 32.000 9.15 9.15 32.11 3.18
3292 3685 7.283127 ACTTCTATGTTGAAAGAGCTTTTGTCA 59.717 33.333 0.00 0.00 32.11 3.58
3295 3688 8.993121 TCTACTTCTATGTTGAAAGAGCTTTTG 58.007 33.333 0.00 0.00 32.11 2.44
3458 3852 2.882137 GGCCGCAATTATAGCCTGTTTA 59.118 45.455 4.89 0.00 42.34 2.01
3604 4001 6.040842 ACATGAAATACAACCAGCAGACTTTT 59.959 34.615 0.00 0.00 0.00 2.27
3880 4341 8.282592 CACCACTTATATTCATCAACATAACCG 58.717 37.037 0.00 0.00 0.00 4.44
4432 4893 3.384532 CCCAACATGGCACTGGGC 61.385 66.667 15.91 0.00 43.35 5.36
4434 4895 1.047002 TTTTCCCAACATGGCACTGG 58.953 50.000 0.00 5.35 35.79 4.00
4435 4896 2.906691 TTTTTCCCAACATGGCACTG 57.093 45.000 0.00 0.00 35.79 3.66
4436 4897 3.647590 AGAATTTTTCCCAACATGGCACT 59.352 39.130 0.00 0.00 35.79 4.40
4437 4898 4.006780 AGAATTTTTCCCAACATGGCAC 57.993 40.909 0.00 0.00 35.79 5.01
4438 4899 4.837860 ACTAGAATTTTTCCCAACATGGCA 59.162 37.500 0.00 0.00 35.79 4.92
4439 4900 5.405935 ACTAGAATTTTTCCCAACATGGC 57.594 39.130 0.00 0.00 35.79 4.40
4440 4901 9.942850 ATAAAACTAGAATTTTTCCCAACATGG 57.057 29.630 0.00 0.00 33.82 3.66
4482 4943 1.078143 GGGATGCAGAGAAACCGCT 60.078 57.895 0.00 0.00 0.00 5.52
4486 4947 3.557228 AGAGATGGGATGCAGAGAAAC 57.443 47.619 0.00 0.00 0.00 2.78
4496 4957 6.101734 ACATTACCACAACATAGAGATGGGAT 59.898 38.462 0.00 0.00 37.39 3.85
4497 4958 5.428457 ACATTACCACAACATAGAGATGGGA 59.572 40.000 0.00 0.00 37.39 4.37


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.