Multiple sequence alignment - TraesCS1D01G405100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G405100 chr1D 100.000 4433 0 0 1 4433 469808795 469813227 0.000000e+00 8187.0
1 TraesCS1D01G405100 chr1D 89.529 191 14 3 1484 1668 466010497 466010307 2.060000e-58 237.0
2 TraesCS1D01G405100 chr1D 75.877 228 44 5 2361 2587 81178526 81178743 6.060000e-19 106.0
3 TraesCS1D01G405100 chr1D 76.168 214 42 9 2437 2647 18079196 18078989 2.180000e-18 104.0
4 TraesCS1D01G405100 chr1D 72.251 382 86 12 2273 2639 18222685 18222309 2.820000e-17 100.0
5 TraesCS1D01G405100 chr1D 84.211 95 15 0 2485 2579 81288128 81288222 4.720000e-15 93.5
6 TraesCS1D01G405100 chr1B 93.177 1495 73 10 1465 2938 651282756 651284242 0.000000e+00 2169.0
7 TraesCS1D01G405100 chr1B 86.630 1279 125 24 3 1260 651281503 651282756 0.000000e+00 1373.0
8 TraesCS1D01G405100 chr1B 90.663 407 24 5 4029 4431 651284821 651285217 3.040000e-146 529.0
9 TraesCS1D01G405100 chr1B 85.976 328 27 9 3053 3377 651284244 651284555 2.560000e-87 333.0
10 TraesCS1D01G405100 chr1B 79.175 509 82 12 1457 1959 643027878 643027388 9.190000e-87 331.0
11 TraesCS1D01G405100 chr1B 88.372 172 18 1 1497 1668 643043858 643043689 5.810000e-49 206.0
12 TraesCS1D01G405100 chr1B 78.107 169 37 0 1046 1214 642924332 642924164 1.690000e-19 108.0
13 TraesCS1D01G405100 chr1B 75.546 229 43 8 2361 2587 134437638 134437855 2.820000e-17 100.0
14 TraesCS1D01G405100 chr1B 84.211 95 15 0 2485 2579 134575781 134575875 4.720000e-15 93.5
15 TraesCS1D01G405100 chr1A 93.064 966 37 5 1542 2500 562916542 562917484 0.000000e+00 1386.0
16 TraesCS1D01G405100 chr1A 76.986 1221 217 36 1457 2645 558334284 558333096 1.340000e-179 640.0
17 TraesCS1D01G405100 chr1A 89.956 229 13 6 4209 4430 562920896 562921121 2.020000e-73 287.0
18 TraesCS1D01G405100 chr1A 89.091 220 15 4 3991 4209 562920616 562920827 9.450000e-67 265.0
19 TraesCS1D01G405100 chr1A 86.364 220 30 0 3529 3748 562918616 562918835 1.590000e-59 241.0
20 TraesCS1D01G405100 chr1A 73.602 447 81 24 2227 2649 20245229 20244796 2.150000e-28 137.0
21 TraesCS1D01G405100 chr1A 76.018 221 40 7 2361 2579 99906197 99906406 7.840000e-18 102.0
22 TraesCS1D01G405100 chr1A 88.372 86 9 1 156 240 562915561 562915646 7.840000e-18 102.0
23 TraesCS1D01G405100 chr1A 72.010 393 86 13 2263 2637 20237004 20236618 1.310000e-15 95.3
24 TraesCS1D01G405100 chr7D 75.536 466 74 28 1523 1959 113107973 113108427 4.520000e-45 193.0
25 TraesCS1D01G405100 chr7D 74.194 465 81 24 1523 1959 113155423 113155876 1.650000e-34 158.0
26 TraesCS1D01G405100 chr7D 93.182 44 1 2 1387 1429 593273742 593273784 3.700000e-06 63.9
27 TraesCS1D01G405100 chr7B 75.216 464 75 24 1523 1959 72504234 72504684 2.720000e-42 183.0
28 TraesCS1D01G405100 chr6B 92.000 100 6 2 1543 1641 504074522 504074424 5.980000e-29 139.0
29 TraesCS1D01G405100 chr6B 74.825 286 64 5 1543 1821 14251801 14251517 6.020000e-24 122.0
30 TraesCS1D01G405100 chr6A 74.912 283 63 5 1543 1818 7732965 7732684 6.020000e-24 122.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G405100 chr1D 469808795 469813227 4432 False 8187.0 8187 100.0000 1 4433 1 chr1D.!!$F3 4432
1 TraesCS1D01G405100 chr1B 651281503 651285217 3714 False 1101.0 2169 89.1115 3 4431 4 chr1B.!!$F3 4428
2 TraesCS1D01G405100 chr1A 558333096 558334284 1188 True 640.0 640 76.9860 1457 2645 1 chr1A.!!$R3 1188
3 TraesCS1D01G405100 chr1A 562915561 562921121 5560 False 456.2 1386 89.3694 156 4430 5 chr1A.!!$F2 4274

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
861 1234 0.037605 CTTTCGTAACGGGAGGTGCT 60.038 55.0 0.0 0.0 0.00 4.40 F
1117 1493 0.031616 AGACCAGGAGGACCCATCTC 60.032 60.0 0.0 0.0 38.69 2.75 F
2602 3537 0.253327 GCTTCTGGAGATTTCCCGGT 59.747 55.0 0.0 0.0 43.33 5.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2742 3677 0.112995 ATGCACCCAGACACCAACAT 59.887 50.0 0.0 0.0 0.0 2.71 R
3049 4001 0.460284 CCTCAAGGGTTGTCGATCCG 60.460 60.0 0.0 0.0 0.0 4.18 R
3582 4664 0.030638 CCAGTTGTTGCCACTTTCCG 59.969 55.0 0.0 0.0 0.0 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 8.289618 TGAATGAAGCTTAGAACACAAATGTAC 58.710 33.333 0.00 0.00 38.45 2.90
32 33 7.986085 ATGAAGCTTAGAACACAAATGTACT 57.014 32.000 0.00 0.00 38.45 2.73
33 34 7.421530 TGAAGCTTAGAACACAAATGTACTC 57.578 36.000 0.00 0.00 38.45 2.59
34 35 6.426937 TGAAGCTTAGAACACAAATGTACTCC 59.573 38.462 0.00 0.00 38.45 3.85
35 36 5.865085 AGCTTAGAACACAAATGTACTCCA 58.135 37.500 0.00 0.00 38.45 3.86
68 71 6.681777 ACTGTTCTTTTTATGATGTTCCAGC 58.318 36.000 0.00 0.00 0.00 4.85
147 150 2.765699 TGTCTGATGATGATGACCGGAA 59.234 45.455 9.46 0.00 0.00 4.30
230 234 3.490348 GGGATGATATGTGTGAAAGGGG 58.510 50.000 0.00 0.00 0.00 4.79
245 249 6.435904 TGTGAAAGGGGTATTCGAAAATTGAT 59.564 34.615 0.00 0.00 0.00 2.57
389 400 7.494625 CCGACTATATTGAAGTTGGCTTAGAAA 59.505 37.037 0.00 0.00 40.74 2.52
392 403 9.740710 ACTATATTGAAGTTGGCTTAGAAAACT 57.259 29.630 0.00 0.00 35.70 2.66
402 413 5.887754 TGGCTTAGAAAACTATTGGGACTT 58.112 37.500 0.00 0.00 0.00 3.01
409 420 4.569719 AAACTATTGGGACTTGGTCGAT 57.430 40.909 0.00 0.00 32.65 3.59
412 423 2.113860 ATTGGGACTTGGTCGATGTG 57.886 50.000 0.00 0.00 32.65 3.21
431 442 0.171231 GGCTGAACCGCTGGATTTTC 59.829 55.000 1.50 0.00 0.00 2.29
438 449 0.447801 CCGCTGGATTTTCGTTGGAG 59.552 55.000 0.00 0.00 0.00 3.86
453 465 2.755103 GTTGGAGTCCCCTTATGCTTTG 59.245 50.000 6.74 0.00 35.38 2.77
469 481 0.476771 TTTGTTCTTCCTCCGGCCTT 59.523 50.000 0.00 0.00 0.00 4.35
479 491 1.926426 CTCCGGCCTTCCCTTCCATT 61.926 60.000 0.00 0.00 0.00 3.16
481 493 1.322538 CCGGCCTTCCCTTCCATTTG 61.323 60.000 0.00 0.00 0.00 2.32
484 496 0.615827 GCCTTCCCTTCCATTTGCCT 60.616 55.000 0.00 0.00 0.00 4.75
488 500 2.148446 TCCCTTCCATTTGCCTGATG 57.852 50.000 0.00 0.00 0.00 3.07
489 501 0.462789 CCCTTCCATTTGCCTGATGC 59.537 55.000 0.00 0.00 41.77 3.91
504 516 1.228245 ATGCAGCACCGGTTGAACT 60.228 52.632 2.97 0.00 0.00 3.01
514 526 1.789078 CGGTTGAACTGCTTGCTGCT 61.789 55.000 0.00 0.00 43.37 4.24
566 578 4.408821 ATCCTCGCTGCCGCCAAA 62.409 61.111 0.00 0.00 0.00 3.28
572 584 3.994853 GCTGCCGCCAAAGCCTTT 61.995 61.111 0.00 0.00 34.57 3.11
584 596 4.460263 CCAAAGCCTTTTAAGCCCTTTTT 58.540 39.130 0.00 0.00 29.51 1.94
585 597 4.515191 CCAAAGCCTTTTAAGCCCTTTTTC 59.485 41.667 0.00 0.00 29.51 2.29
590 603 7.316393 AGCCTTTTAAGCCCTTTTTCTAATT 57.684 32.000 0.00 0.00 0.00 1.40
623 989 9.985318 GAACTCACAAGAAATCATGAATCTTAG 57.015 33.333 20.50 17.46 32.38 2.18
818 1189 8.716646 AAACAAAAACTGAGAAAACCATAAGG 57.283 30.769 0.00 0.00 42.21 2.69
841 1213 3.902261 AAAAACCGTTAAGCGTTAGGG 57.098 42.857 0.00 0.00 39.32 3.53
857 1230 1.449070 GGGCTTTCGTAACGGGAGG 60.449 63.158 0.00 0.00 0.00 4.30
861 1234 0.037605 CTTTCGTAACGGGAGGTGCT 60.038 55.000 0.00 0.00 0.00 4.40
891 1266 2.590575 CCCACGACCACGCTTTGT 60.591 61.111 0.00 0.00 43.96 2.83
924 1299 2.331451 GCAACAAGACGCCACACC 59.669 61.111 0.00 0.00 0.00 4.16
1014 1390 4.802051 GCAATGCCGCCAGGAGGA 62.802 66.667 14.69 0.00 41.02 3.71
1015 1391 2.515523 CAATGCCGCCAGGAGGAG 60.516 66.667 14.69 0.00 41.02 3.69
1028 1404 1.293683 GGAGGAGGAGGAGGAGGAGT 61.294 65.000 0.00 0.00 0.00 3.85
1038 1414 1.571936 GGAGGAGGAGTAGGAGAAGGT 59.428 57.143 0.00 0.00 0.00 3.50
1044 1420 2.862597 AGGAGTAGGAGAAGGTGGAGAT 59.137 50.000 0.00 0.00 0.00 2.75
1059 1435 1.381872 AGATGGAGGAGACCACGGG 60.382 63.158 0.00 0.00 43.03 5.28
1102 1478 1.891616 GGAGACGGAGACCAAGACC 59.108 63.158 0.00 0.00 0.00 3.85
1117 1493 0.031616 AGACCAGGAGGACCCATCTC 60.032 60.000 0.00 0.00 38.69 2.75
1118 1494 1.381872 ACCAGGAGGACCCATCTCG 60.382 63.158 0.00 0.00 38.69 4.04
1119 1495 1.381872 CCAGGAGGACCCATCTCGT 60.382 63.158 0.00 0.00 36.89 4.18
1130 1506 2.900546 ACCCATCTCGTTCTTCTCTGTT 59.099 45.455 0.00 0.00 0.00 3.16
1140 1516 3.158537 TTCTCTGTTGCCGCCGTCA 62.159 57.895 0.00 0.00 0.00 4.35
1188 1564 1.654954 TAGAGTCTGAGGTTCGCGCC 61.655 60.000 0.00 0.00 0.00 6.53
1190 1566 4.373116 GTCTGAGGTTCGCGCCCA 62.373 66.667 15.61 5.80 0.00 5.36
1193 1569 4.467084 TGAGGTTCGCGCCCATCC 62.467 66.667 15.61 0.00 0.00 3.51
1202 1578 2.998097 CGCCCATCCTCTTTCCCA 59.002 61.111 0.00 0.00 0.00 4.37
1227 1603 9.331282 CATGATCGATCTGGTAGATGTACTATA 57.669 37.037 25.02 0.00 34.53 1.31
1232 1608 9.570468 TCGATCTGGTAGATGTACTATAAACTT 57.430 33.333 0.00 0.00 34.53 2.66
1239 1615 9.392259 GGTAGATGTACTATAAACTTTTGCCTT 57.608 33.333 0.00 0.00 33.39 4.35
1284 1660 8.454570 TTTAGGAACAAGAACCTAAACGAATT 57.545 30.769 12.44 0.00 46.82 2.17
1285 1661 6.313744 AGGAACAAGAACCTAAACGAATTG 57.686 37.500 0.00 0.00 34.47 2.32
1286 1662 5.240844 AGGAACAAGAACCTAAACGAATTGG 59.759 40.000 0.00 0.00 34.47 3.16
1287 1663 5.009310 GGAACAAGAACCTAAACGAATTGGT 59.991 40.000 0.00 0.00 0.00 3.67
1288 1664 6.459670 AACAAGAACCTAAACGAATTGGTT 57.540 33.333 0.00 0.00 44.43 3.67
1289 1665 6.459670 ACAAGAACCTAAACGAATTGGTTT 57.540 33.333 20.27 20.27 42.15 3.27
1290 1666 6.869695 ACAAGAACCTAAACGAATTGGTTTT 58.130 32.000 21.37 5.88 42.15 2.43
1291 1667 6.754675 ACAAGAACCTAAACGAATTGGTTTTG 59.245 34.615 21.37 18.72 42.15 2.44
1292 1668 6.459670 AGAACCTAAACGAATTGGTTTTGT 57.540 33.333 21.37 16.16 42.15 2.83
1293 1669 7.571080 AGAACCTAAACGAATTGGTTTTGTA 57.429 32.000 21.37 5.55 42.15 2.41
1294 1670 7.420002 AGAACCTAAACGAATTGGTTTTGTAC 58.580 34.615 21.37 12.88 42.15 2.90
1295 1671 6.696441 ACCTAAACGAATTGGTTTTGTACA 57.304 33.333 21.37 4.90 40.41 2.90
1296 1672 7.279750 ACCTAAACGAATTGGTTTTGTACAT 57.720 32.000 21.37 0.92 40.41 2.29
1297 1673 7.718525 ACCTAAACGAATTGGTTTTGTACATT 58.281 30.769 21.37 0.25 40.41 2.71
1298 1674 8.198778 ACCTAAACGAATTGGTTTTGTACATTT 58.801 29.630 21.37 0.00 40.41 2.32
1299 1675 9.036671 CCTAAACGAATTGGTTTTGTACATTTT 57.963 29.630 21.37 0.00 40.41 1.82
1301 1677 8.710835 AAACGAATTGGTTTTGTACATTTTCT 57.289 26.923 12.25 0.00 36.78 2.52
1302 1678 7.924103 ACGAATTGGTTTTGTACATTTTCTC 57.076 32.000 0.00 0.00 29.65 2.87
1303 1679 7.484975 ACGAATTGGTTTTGTACATTTTCTCA 58.515 30.769 0.00 0.00 29.65 3.27
1304 1680 7.976734 ACGAATTGGTTTTGTACATTTTCTCAA 59.023 29.630 0.00 0.00 29.65 3.02
1305 1681 8.977505 CGAATTGGTTTTGTACATTTTCTCAAT 58.022 29.630 0.00 0.66 0.00 2.57
1335 1711 6.783892 TGTTCATTAACACCGGTTTAGTAC 57.216 37.500 2.97 1.92 40.69 2.73
1336 1712 6.286758 TGTTCATTAACACCGGTTTAGTACA 58.713 36.000 2.97 4.34 40.69 2.90
1337 1713 6.935771 TGTTCATTAACACCGGTTTAGTACAT 59.064 34.615 2.97 0.00 40.69 2.29
1338 1714 7.118101 TGTTCATTAACACCGGTTTAGTACATC 59.882 37.037 2.97 0.00 40.69 3.06
1339 1715 6.938507 TCATTAACACCGGTTTAGTACATCT 58.061 36.000 2.97 0.00 38.45 2.90
1340 1716 7.388437 TCATTAACACCGGTTTAGTACATCTT 58.612 34.615 2.97 0.00 38.45 2.40
1341 1717 7.546667 TCATTAACACCGGTTTAGTACATCTTC 59.453 37.037 2.97 0.00 38.45 2.87
1342 1718 5.479124 AACACCGGTTTAGTACATCTTCT 57.521 39.130 2.97 0.00 31.83 2.85
1343 1719 5.069501 ACACCGGTTTAGTACATCTTCTC 57.930 43.478 2.97 0.00 0.00 2.87
1344 1720 4.525487 ACACCGGTTTAGTACATCTTCTCA 59.475 41.667 2.97 0.00 0.00 3.27
1345 1721 5.011329 ACACCGGTTTAGTACATCTTCTCAA 59.989 40.000 2.97 0.00 0.00 3.02
1346 1722 6.106673 CACCGGTTTAGTACATCTTCTCAAT 58.893 40.000 2.97 0.00 0.00 2.57
1347 1723 6.594159 CACCGGTTTAGTACATCTTCTCAATT 59.406 38.462 2.97 0.00 0.00 2.32
1348 1724 7.119262 CACCGGTTTAGTACATCTTCTCAATTT 59.881 37.037 2.97 0.00 0.00 1.82
1349 1725 7.333672 ACCGGTTTAGTACATCTTCTCAATTTC 59.666 37.037 0.00 0.00 0.00 2.17
1350 1726 7.333423 CCGGTTTAGTACATCTTCTCAATTTCA 59.667 37.037 0.00 0.00 0.00 2.69
1351 1727 8.383619 CGGTTTAGTACATCTTCTCAATTTCAG 58.616 37.037 0.00 0.00 0.00 3.02
1352 1728 9.436957 GGTTTAGTACATCTTCTCAATTTCAGA 57.563 33.333 0.00 0.00 0.00 3.27
1357 1733 9.512588 AGTACATCTTCTCAATTTCAGAATGTT 57.487 29.630 0.00 0.00 37.40 2.71
1358 1734 9.766277 GTACATCTTCTCAATTTCAGAATGTTC 57.234 33.333 7.82 2.40 37.40 3.18
1359 1735 8.400184 ACATCTTCTCAATTTCAGAATGTTCA 57.600 30.769 0.00 0.00 37.40 3.18
1360 1736 9.021807 ACATCTTCTCAATTTCAGAATGTTCAT 57.978 29.630 0.00 0.00 37.40 2.57
1361 1737 9.856488 CATCTTCTCAATTTCAGAATGTTCATT 57.144 29.630 0.00 0.00 37.40 2.57
1398 1774 9.511272 AAAAAGGGAGATGTATACTAAACGTTT 57.489 29.630 18.90 18.90 0.00 3.60
1399 1775 9.511272 AAAAGGGAGATGTATACTAAACGTTTT 57.489 29.630 20.19 4.50 0.00 2.43
1400 1776 8.488651 AAGGGAGATGTATACTAAACGTTTTG 57.511 34.615 20.19 19.40 0.00 2.44
1401 1777 7.046033 AGGGAGATGTATACTAAACGTTTTGG 58.954 38.462 20.19 14.48 0.00 3.28
1402 1778 6.238293 GGGAGATGTATACTAAACGTTTTGGC 60.238 42.308 20.19 9.62 0.00 4.52
1403 1779 6.314400 GGAGATGTATACTAAACGTTTTGGCA 59.686 38.462 20.19 14.34 0.00 4.92
1404 1780 7.303634 AGATGTATACTAAACGTTTTGGCAG 57.696 36.000 20.19 12.67 0.00 4.85
1405 1781 6.877322 AGATGTATACTAAACGTTTTGGCAGT 59.123 34.615 20.19 17.76 0.00 4.40
1406 1782 6.864360 TGTATACTAAACGTTTTGGCAGTT 57.136 33.333 20.19 9.44 0.00 3.16
1407 1783 6.890558 TGTATACTAAACGTTTTGGCAGTTC 58.109 36.000 20.19 10.37 0.00 3.01
1408 1784 6.482641 TGTATACTAAACGTTTTGGCAGTTCA 59.517 34.615 20.19 12.43 0.00 3.18
1409 1785 4.705337 ACTAAACGTTTTGGCAGTTCAA 57.295 36.364 20.19 0.00 0.00 2.69
1410 1786 5.257082 ACTAAACGTTTTGGCAGTTCAAT 57.743 34.783 20.19 0.00 0.00 2.57
1411 1787 5.656480 ACTAAACGTTTTGGCAGTTCAATT 58.344 33.333 20.19 0.00 0.00 2.32
1412 1788 6.797454 ACTAAACGTTTTGGCAGTTCAATTA 58.203 32.000 20.19 0.00 0.00 1.40
1413 1789 6.915843 ACTAAACGTTTTGGCAGTTCAATTAG 59.084 34.615 20.19 7.44 0.00 1.73
1414 1790 4.911514 ACGTTTTGGCAGTTCAATTAGT 57.088 36.364 0.00 0.00 0.00 2.24
1415 1791 5.257082 ACGTTTTGGCAGTTCAATTAGTT 57.743 34.783 0.00 0.00 0.00 2.24
1416 1792 5.278604 ACGTTTTGGCAGTTCAATTAGTTC 58.721 37.500 0.00 0.00 0.00 3.01
1417 1793 5.163602 ACGTTTTGGCAGTTCAATTAGTTCA 60.164 36.000 0.00 0.00 0.00 3.18
1418 1794 5.746245 CGTTTTGGCAGTTCAATTAGTTCAA 59.254 36.000 0.00 0.00 0.00 2.69
1419 1795 6.254589 CGTTTTGGCAGTTCAATTAGTTCAAA 59.745 34.615 0.00 0.00 0.00 2.69
1420 1796 7.042791 CGTTTTGGCAGTTCAATTAGTTCAAAT 60.043 33.333 0.00 0.00 0.00 2.32
1421 1797 8.611757 GTTTTGGCAGTTCAATTAGTTCAAATT 58.388 29.630 0.00 0.00 0.00 1.82
1422 1798 7.712264 TTGGCAGTTCAATTAGTTCAAATTG 57.288 32.000 3.48 3.48 44.61 2.32
1439 1815 7.621832 TCAAATTGAACTGCTAAACGAATTG 57.378 32.000 0.00 0.00 0.00 2.32
1440 1816 6.640499 TCAAATTGAACTGCTAAACGAATTGG 59.360 34.615 0.00 0.00 0.00 3.16
1441 1817 4.497473 TTGAACTGCTAAACGAATTGGG 57.503 40.909 0.00 0.00 0.00 4.12
1442 1818 3.482436 TGAACTGCTAAACGAATTGGGT 58.518 40.909 0.00 0.00 0.00 4.51
1443 1819 3.886505 TGAACTGCTAAACGAATTGGGTT 59.113 39.130 0.00 0.00 0.00 4.11
1444 1820 4.339814 TGAACTGCTAAACGAATTGGGTTT 59.660 37.500 0.00 3.00 40.45 3.27
1445 1821 4.929819 ACTGCTAAACGAATTGGGTTTT 57.070 36.364 8.91 0.00 38.47 2.43
1446 1822 4.616953 ACTGCTAAACGAATTGGGTTTTG 58.383 39.130 8.91 8.44 38.47 2.44
1447 1823 4.339814 ACTGCTAAACGAATTGGGTTTTGA 59.660 37.500 13.52 0.00 38.47 2.69
1448 1824 4.865776 TGCTAAACGAATTGGGTTTTGAG 58.134 39.130 13.52 7.02 38.47 3.02
1449 1825 4.234574 GCTAAACGAATTGGGTTTTGAGG 58.765 43.478 13.52 4.61 38.47 3.86
1450 1826 4.022676 GCTAAACGAATTGGGTTTTGAGGA 60.023 41.667 13.52 0.00 38.47 3.71
1451 1827 5.508320 GCTAAACGAATTGGGTTTTGAGGAA 60.508 40.000 13.52 0.00 38.47 3.36
1452 1828 5.545063 AAACGAATTGGGTTTTGAGGAAT 57.455 34.783 0.00 0.00 34.08 3.01
1453 1829 4.519540 ACGAATTGGGTTTTGAGGAATG 57.480 40.909 0.00 0.00 0.00 2.67
1454 1830 3.253230 CGAATTGGGTTTTGAGGAATGC 58.747 45.455 0.00 0.00 0.00 3.56
1455 1831 3.305950 CGAATTGGGTTTTGAGGAATGCA 60.306 43.478 0.00 0.00 0.00 3.96
1463 1839 5.394115 GGGTTTTGAGGAATGCATAAACGAT 60.394 40.000 0.00 0.00 0.00 3.73
1697 2086 4.043200 GGCTGGCGCTTCCACAAC 62.043 66.667 7.64 0.00 40.72 3.32
1698 2087 2.980233 GCTGGCGCTTCCACAACT 60.980 61.111 7.64 0.00 40.72 3.16
1699 2088 1.671054 GCTGGCGCTTCCACAACTA 60.671 57.895 7.64 0.00 40.72 2.24
1706 2101 2.484264 GCGCTTCCACAACTATTTGTCT 59.516 45.455 0.00 0.00 44.57 3.41
1757 2152 3.659092 CCTTTCTTGCGCGGCACA 61.659 61.111 8.83 0.00 38.71 4.57
1841 2236 1.480683 CCCCATCCTAAGCTACTCGGA 60.481 57.143 0.00 0.00 0.00 4.55
1904 2299 2.683465 GGGGGCTGAGGCTGATCAA 61.683 63.158 5.84 0.00 38.73 2.57
2204 2605 1.888512 TGCTTCTTTCTGAATGGCACC 59.111 47.619 0.00 0.00 32.99 5.01
2353 2757 2.472909 GCCTGTATGCTTGGCGGAC 61.473 63.158 3.21 0.00 37.11 4.79
2444 2857 1.136891 GTTGGCTGCCTTGAACTGTTT 59.863 47.619 21.03 0.00 0.00 2.83
2602 3537 0.253327 GCTTCTGGAGATTTCCCGGT 59.747 55.000 0.00 0.00 43.33 5.28
2659 3594 4.649692 ACATGAGATGCTTGTCTTGAGTT 58.350 39.130 16.11 0.00 29.69 3.01
2668 3603 2.234300 TGTCTTGAGTTCGTTGGGTC 57.766 50.000 0.00 0.00 0.00 4.46
2672 3607 3.927142 GTCTTGAGTTCGTTGGGTCTATG 59.073 47.826 0.00 0.00 0.00 2.23
2699 3634 6.699575 AATCTTGTAGTTTTGAAGCTGTGT 57.300 33.333 0.00 0.00 0.00 3.72
2703 3638 4.980590 TGTAGTTTTGAAGCTGTGTGTTG 58.019 39.130 0.00 0.00 0.00 3.33
2706 3641 3.119495 AGTTTTGAAGCTGTGTGTTGGTC 60.119 43.478 0.00 0.00 0.00 4.02
2735 3670 8.840833 TCTGTTGTATAAATGCACTTGAGTTA 57.159 30.769 0.00 0.00 0.00 2.24
2736 3671 9.448438 TCTGTTGTATAAATGCACTTGAGTTAT 57.552 29.630 0.00 0.00 0.00 1.89
2746 3681 8.891671 AATGCACTTGAGTTATTTTTCATGTT 57.108 26.923 0.00 0.00 31.65 2.71
2747 3682 7.697352 TGCACTTGAGTTATTTTTCATGTTG 57.303 32.000 0.00 0.00 31.65 3.33
2753 3689 7.581213 TGAGTTATTTTTCATGTTGGTGTCT 57.419 32.000 0.00 0.00 0.00 3.41
2785 3721 5.163364 TGCCCTTCTTTTGCTTTGAACAATA 60.163 36.000 0.00 0.00 0.00 1.90
2788 3724 6.642540 CCCTTCTTTTGCTTTGAACAATACTC 59.357 38.462 0.00 0.00 0.00 2.59
2789 3725 6.642540 CCTTCTTTTGCTTTGAACAATACTCC 59.357 38.462 0.00 0.00 0.00 3.85
2804 3755 5.482175 ACAATACTCCATATCACTAGCCCTC 59.518 44.000 0.00 0.00 0.00 4.30
2820 3771 5.096443 AGCCCTCTGATGAGAAAGTTTAG 57.904 43.478 0.00 0.00 42.73 1.85
2824 3775 5.486526 CCTCTGATGAGAAAGTTTAGCTGT 58.513 41.667 0.00 0.00 42.73 4.40
2836 3787 8.678199 AGAAAGTTTAGCTGTATGAATAAAGCC 58.322 33.333 8.58 0.00 43.22 4.35
2849 3800 4.082081 TGAATAAAGCCAGCCATTGTTCTG 60.082 41.667 12.88 0.00 0.00 3.02
2854 3805 1.337167 GCCAGCCATTGTTCTGTTTCC 60.337 52.381 3.51 0.00 0.00 3.13
2865 3816 6.445357 TTGTTCTGTTTCCTTTCCTGTAAC 57.555 37.500 0.00 0.00 0.00 2.50
2879 3830 9.289303 CCTTTCCTGTAACAATTATTGATTTCG 57.711 33.333 12.28 0.00 0.00 3.46
2886 3837 9.906660 TGTAACAATTATTGATTTCGCTCTTTT 57.093 25.926 12.28 0.00 0.00 2.27
2938 3890 1.603678 GCAACTTGCTGTCCACCAATG 60.604 52.381 6.50 0.00 40.96 2.82
2939 3891 1.682854 CAACTTGCTGTCCACCAATGT 59.317 47.619 0.00 0.00 0.00 2.71
2940 3892 1.609208 ACTTGCTGTCCACCAATGTC 58.391 50.000 0.00 0.00 0.00 3.06
2941 3893 1.133823 ACTTGCTGTCCACCAATGTCA 60.134 47.619 0.00 0.00 0.00 3.58
2942 3894 1.955778 CTTGCTGTCCACCAATGTCAA 59.044 47.619 0.00 0.00 0.00 3.18
2943 3895 2.064434 TGCTGTCCACCAATGTCAAA 57.936 45.000 0.00 0.00 0.00 2.69
2944 3896 2.596346 TGCTGTCCACCAATGTCAAAT 58.404 42.857 0.00 0.00 0.00 2.32
2945 3897 3.760738 TGCTGTCCACCAATGTCAAATA 58.239 40.909 0.00 0.00 0.00 1.40
2946 3898 4.343231 TGCTGTCCACCAATGTCAAATAT 58.657 39.130 0.00 0.00 0.00 1.28
2947 3899 4.771577 TGCTGTCCACCAATGTCAAATATT 59.228 37.500 0.00 0.00 0.00 1.28
2948 3900 5.245751 TGCTGTCCACCAATGTCAAATATTT 59.754 36.000 0.00 0.00 0.00 1.40
2949 3901 6.435591 TGCTGTCCACCAATGTCAAATATTTA 59.564 34.615 0.00 0.00 0.00 1.40
2950 3902 7.123997 TGCTGTCCACCAATGTCAAATATTTAT 59.876 33.333 0.00 0.00 0.00 1.40
2951 3903 7.649306 GCTGTCCACCAATGTCAAATATTTATC 59.351 37.037 0.00 0.00 0.00 1.75
2952 3904 8.821686 TGTCCACCAATGTCAAATATTTATCT 57.178 30.769 0.00 0.00 0.00 1.98
2953 3905 9.253832 TGTCCACCAATGTCAAATATTTATCTT 57.746 29.630 0.00 0.00 0.00 2.40
2956 3908 8.819974 CCACCAATGTCAAATATTTATCTTTGC 58.180 33.333 0.00 0.00 33.40 3.68
2957 3909 8.819974 CACCAATGTCAAATATTTATCTTTGCC 58.180 33.333 0.00 0.00 33.40 4.52
2958 3910 8.761689 ACCAATGTCAAATATTTATCTTTGCCT 58.238 29.630 0.00 0.00 33.40 4.75
2959 3911 9.037737 CCAATGTCAAATATTTATCTTTGCCTG 57.962 33.333 0.00 0.00 33.40 4.85
2960 3912 9.590451 CAATGTCAAATATTTATCTTTGCCTGT 57.410 29.630 0.00 0.00 33.40 4.00
2963 3915 9.638239 TGTCAAATATTTATCTTTGCCTGTTTC 57.362 29.630 0.00 0.00 33.40 2.78
2964 3916 9.860898 GTCAAATATTTATCTTTGCCTGTTTCT 57.139 29.630 0.00 0.00 33.40 2.52
2973 3925 9.747898 TTATCTTTGCCTGTTTCTTTTATAGGA 57.252 29.630 0.00 0.00 0.00 2.94
2974 3926 8.650143 ATCTTTGCCTGTTTCTTTTATAGGAA 57.350 30.769 0.00 0.00 0.00 3.36
2975 3927 8.110860 TCTTTGCCTGTTTCTTTTATAGGAAG 57.889 34.615 0.00 0.00 0.00 3.46
2976 3928 7.724061 TCTTTGCCTGTTTCTTTTATAGGAAGT 59.276 33.333 0.00 0.00 0.00 3.01
2977 3929 8.927675 TTTGCCTGTTTCTTTTATAGGAAGTA 57.072 30.769 0.00 0.00 0.00 2.24
2978 3930 8.561738 TTGCCTGTTTCTTTTATAGGAAGTAG 57.438 34.615 0.00 0.00 0.00 2.57
2979 3931 7.110155 TGCCTGTTTCTTTTATAGGAAGTAGG 58.890 38.462 0.00 0.00 33.52 3.18
2980 3932 7.037873 TGCCTGTTTCTTTTATAGGAAGTAGGA 60.038 37.037 11.10 0.00 32.84 2.94
2981 3933 7.827729 GCCTGTTTCTTTTATAGGAAGTAGGAA 59.172 37.037 11.10 0.00 32.84 3.36
2982 3934 9.384764 CCTGTTTCTTTTATAGGAAGTAGGAAG 57.615 37.037 0.00 0.00 32.84 3.46
2983 3935 9.945904 CTGTTTCTTTTATAGGAAGTAGGAAGT 57.054 33.333 0.00 0.00 0.00 3.01
2997 3949 9.327628 GGAAGTAGGAAGTAAAATGTTATCTCC 57.672 37.037 0.00 0.00 0.00 3.71
3003 3955 8.049721 AGGAAGTAAAATGTTATCTCCTTCTGG 58.950 37.037 3.62 0.00 32.88 3.86
3004 3956 8.047310 GGAAGTAAAATGTTATCTCCTTCTGGA 58.953 37.037 0.00 0.00 40.69 3.86
3005 3957 9.620259 GAAGTAAAATGTTATCTCCTTCTGGAT 57.380 33.333 0.00 0.00 42.29 3.41
3006 3958 9.981460 AAGTAAAATGTTATCTCCTTCTGGATT 57.019 29.630 0.00 0.00 42.29 3.01
3007 3959 9.401058 AGTAAAATGTTATCTCCTTCTGGATTG 57.599 33.333 0.00 0.00 42.29 2.67
3008 3960 9.178758 GTAAAATGTTATCTCCTTCTGGATTGT 57.821 33.333 0.00 0.00 42.29 2.71
3009 3961 7.636150 AAATGTTATCTCCTTCTGGATTGTG 57.364 36.000 0.00 0.00 42.29 3.33
3010 3962 5.762179 TGTTATCTCCTTCTGGATTGTGT 57.238 39.130 0.00 0.00 42.29 3.72
3011 3963 6.126863 TGTTATCTCCTTCTGGATTGTGTT 57.873 37.500 0.00 0.00 42.29 3.32
3012 3964 6.542821 TGTTATCTCCTTCTGGATTGTGTTT 58.457 36.000 0.00 0.00 42.29 2.83
3013 3965 7.004086 TGTTATCTCCTTCTGGATTGTGTTTT 58.996 34.615 0.00 0.00 42.29 2.43
3014 3966 7.505585 TGTTATCTCCTTCTGGATTGTGTTTTT 59.494 33.333 0.00 0.00 42.29 1.94
3041 3993 9.554395 TCATTTTTCACAAGTACTATGAAGTCA 57.446 29.630 17.42 9.65 37.15 3.41
3044 3996 8.902540 TTTTCACAAGTACTATGAAGTCATGT 57.097 30.769 17.42 4.42 37.15 3.21
3045 3997 8.902540 TTTCACAAGTACTATGAAGTCATGTT 57.097 30.769 17.42 0.00 37.15 2.71
3046 3998 8.902540 TTCACAAGTACTATGAAGTCATGTTT 57.097 30.769 15.25 0.00 37.15 2.83
3047 3999 8.534333 TCACAAGTACTATGAAGTCATGTTTC 57.466 34.615 7.18 0.00 37.15 2.78
3048 4000 8.367911 TCACAAGTACTATGAAGTCATGTTTCT 58.632 33.333 7.18 0.00 37.15 2.52
3049 4001 8.651588 CACAAGTACTATGAAGTCATGTTTCTC 58.348 37.037 0.00 0.00 37.15 2.87
3050 4002 7.542477 ACAAGTACTATGAAGTCATGTTTCTCG 59.458 37.037 0.00 5.34 37.15 4.04
3051 4003 6.565234 AGTACTATGAAGTCATGTTTCTCGG 58.435 40.000 4.00 6.27 37.15 4.63
3057 4009 3.152261 AGTCATGTTTCTCGGATCGAC 57.848 47.619 0.00 0.00 0.00 4.20
3061 4013 2.074547 TGTTTCTCGGATCGACAACC 57.925 50.000 0.00 0.00 0.00 3.77
3116 4068 8.955061 TTTTCTTCTTCAGATTTGCTAATTCG 57.045 30.769 0.00 0.00 0.00 3.34
3119 4071 5.221891 TCTTCAGATTTGCTAATTCGCAC 57.778 39.130 3.81 0.00 40.09 5.34
3158 4110 8.409358 AACAAATTCTCATATAACCCCTATGC 57.591 34.615 0.00 0.00 0.00 3.14
3172 4124 5.794894 ACCCCTATGCTATTTGATTCTACG 58.205 41.667 0.00 0.00 0.00 3.51
3240 4192 7.981789 TCCATTGTAATGTCACTTAGATGAGAC 59.018 37.037 4.12 0.00 34.60 3.36
3271 4223 6.839124 ATTCACATCTAGATGAGAGCTAGG 57.161 41.667 34.16 14.71 41.20 3.02
3278 4230 5.044179 ATCTAGATGAGAGCTAGGCATACCT 60.044 44.000 3.89 0.00 43.63 3.08
3293 4370 4.876679 GGCATACCTGTACTTCTTCCTTTC 59.123 45.833 0.00 0.00 0.00 2.62
3295 4372 5.721232 CATACCTGTACTTCTTCCTTTCGT 58.279 41.667 0.00 0.00 0.00 3.85
3314 4391 8.745837 CCTTTCGTAAAATGCATATGATGTTTC 58.254 33.333 6.97 0.00 0.00 2.78
3315 4392 9.288124 CTTTCGTAAAATGCATATGATGTTTCA 57.712 29.630 6.97 0.00 36.00 2.69
3331 4408 8.347004 TGATGTTTCAAGGCAATAAGTTATGA 57.653 30.769 0.00 0.00 0.00 2.15
3349 4426 9.787532 AAGTTATGATGGAATGAAAATTGTACG 57.212 29.630 0.00 0.00 0.00 3.67
3350 4427 8.405531 AGTTATGATGGAATGAAAATTGTACGG 58.594 33.333 0.00 0.00 0.00 4.02
3357 4434 5.798434 GGAATGAAAATTGTACGGTAAGTGC 59.202 40.000 0.00 0.00 35.92 4.40
3363 4440 6.476243 AAATTGTACGGTAAGTGCAGTAAG 57.524 37.500 0.00 0.00 45.82 2.34
3369 4446 7.250569 TGTACGGTAAGTGCAGTAAGTATAAC 58.749 38.462 0.00 0.00 40.53 1.89
3370 4447 6.271488 ACGGTAAGTGCAGTAAGTATAACA 57.729 37.500 0.00 0.00 0.00 2.41
3373 4450 6.810182 CGGTAAGTGCAGTAAGTATAACAACT 59.190 38.462 0.00 0.00 0.00 3.16
3374 4451 7.201410 CGGTAAGTGCAGTAAGTATAACAACTG 60.201 40.741 0.00 7.72 41.78 3.16
3375 4452 7.601508 GGTAAGTGCAGTAAGTATAACAACTGT 59.398 37.037 0.00 0.00 41.11 3.55
3394 4471 4.859245 ACTGTATATATCGTTCATGCTGCG 59.141 41.667 0.00 0.00 0.00 5.18
3419 4499 1.131883 GGCTCAAGCTTATGCACACTG 59.868 52.381 19.85 0.00 42.74 3.66
3424 4504 3.253188 TCAAGCTTATGCACACTGTTTCC 59.747 43.478 0.00 0.00 42.74 3.13
3426 4506 2.816087 AGCTTATGCACACTGTTTCCAG 59.184 45.455 3.16 0.00 42.37 3.86
3429 4509 1.609208 ATGCACACTGTTTCCAGGTC 58.391 50.000 0.00 0.00 43.36 3.85
3430 4510 0.546122 TGCACACTGTTTCCAGGTCT 59.454 50.000 0.00 0.00 43.36 3.85
3435 4515 3.251729 CACACTGTTTCCAGGTCTGATTG 59.748 47.826 0.00 0.00 43.36 2.67
3436 4516 2.227388 CACTGTTTCCAGGTCTGATTGC 59.773 50.000 0.00 0.00 43.36 3.56
3437 4517 1.466167 CTGTTTCCAGGTCTGATTGCG 59.534 52.381 0.00 0.00 34.90 4.85
3438 4518 1.202758 TGTTTCCAGGTCTGATTGCGT 60.203 47.619 0.00 0.00 0.00 5.24
3439 4519 1.880027 GTTTCCAGGTCTGATTGCGTT 59.120 47.619 0.00 0.00 0.00 4.84
3440 4520 1.522668 TTCCAGGTCTGATTGCGTTG 58.477 50.000 0.00 0.00 0.00 4.10
3442 4522 0.518636 CCAGGTCTGATTGCGTTGTG 59.481 55.000 0.00 0.00 0.00 3.33
3443 4523 1.229428 CAGGTCTGATTGCGTTGTGT 58.771 50.000 0.00 0.00 0.00 3.72
3444 4524 2.412870 CAGGTCTGATTGCGTTGTGTA 58.587 47.619 0.00 0.00 0.00 2.90
3447 4527 3.250040 AGGTCTGATTGCGTTGTGTAAAC 59.750 43.478 0.00 0.00 0.00 2.01
3449 4529 3.002862 GTCTGATTGCGTTGTGTAAACCA 59.997 43.478 0.00 0.00 0.00 3.67
3452 4532 3.628032 TGATTGCGTTGTGTAAACCAAGA 59.372 39.130 0.00 0.00 0.00 3.02
3453 4533 4.277174 TGATTGCGTTGTGTAAACCAAGAT 59.723 37.500 0.00 0.00 0.00 2.40
3454 4534 5.470437 TGATTGCGTTGTGTAAACCAAGATA 59.530 36.000 0.00 0.00 0.00 1.98
3455 4535 5.351233 TTGCGTTGTGTAAACCAAGATAG 57.649 39.130 0.00 0.00 0.00 2.08
3472 4554 9.333724 ACCAAGATAGGTATTTTATGTTTACGG 57.666 33.333 0.00 0.00 40.98 4.02
3475 4557 8.807667 AGATAGGTATTTTATGTTTACGGACG 57.192 34.615 0.00 0.00 0.00 4.79
3480 4562 6.257630 GGTATTTTATGTTTACGGACGGCTTA 59.742 38.462 0.00 0.00 0.00 3.09
3484 4566 1.888512 TGTTTACGGACGGCTTAGAGT 59.111 47.619 0.00 0.00 0.00 3.24
3486 4568 0.171903 TTACGGACGGCTTAGAGTGC 59.828 55.000 0.00 0.00 0.00 4.40
3495 4577 3.118775 ACGGCTTAGAGTGCACAATGATA 60.119 43.478 21.04 1.02 0.00 2.15
3496 4578 3.246226 CGGCTTAGAGTGCACAATGATAC 59.754 47.826 21.04 3.32 0.00 2.24
3505 4587 3.191162 GTGCACAATGATACCAAGCAGAA 59.809 43.478 13.17 0.00 0.00 3.02
3506 4588 3.825585 TGCACAATGATACCAAGCAGAAA 59.174 39.130 0.00 0.00 0.00 2.52
3507 4589 4.280425 TGCACAATGATACCAAGCAGAAAA 59.720 37.500 0.00 0.00 0.00 2.29
3508 4590 4.622740 GCACAATGATACCAAGCAGAAAAC 59.377 41.667 0.00 0.00 0.00 2.43
3509 4591 5.771469 CACAATGATACCAAGCAGAAAACA 58.229 37.500 0.00 0.00 0.00 2.83
3510 4592 5.860182 CACAATGATACCAAGCAGAAAACAG 59.140 40.000 0.00 0.00 0.00 3.16
3511 4593 5.047802 ACAATGATACCAAGCAGAAAACAGG 60.048 40.000 0.00 0.00 0.00 4.00
3513 4595 3.073798 TGATACCAAGCAGAAAACAGGGA 59.926 43.478 0.00 0.00 0.00 4.20
3514 4596 1.986882 ACCAAGCAGAAAACAGGGAG 58.013 50.000 0.00 0.00 0.00 4.30
3517 4599 1.000938 CAAGCAGAAAACAGGGAGCAC 60.001 52.381 0.00 0.00 0.00 4.40
3519 4601 1.133668 AGCAGAAAACAGGGAGCACTT 60.134 47.619 0.00 0.00 0.00 3.16
3520 4602 1.268079 GCAGAAAACAGGGAGCACTTC 59.732 52.381 0.00 0.00 0.00 3.01
3522 4604 2.551459 CAGAAAACAGGGAGCACTTCTG 59.449 50.000 0.00 0.00 35.33 3.02
3523 4605 2.439507 AGAAAACAGGGAGCACTTCTGA 59.560 45.455 10.60 0.00 33.19 3.27
3524 4606 2.262423 AAACAGGGAGCACTTCTGAC 57.738 50.000 10.60 0.00 33.19 3.51
3525 4607 1.131638 AACAGGGAGCACTTCTGACA 58.868 50.000 10.60 0.00 33.19 3.58
3526 4608 1.356124 ACAGGGAGCACTTCTGACAT 58.644 50.000 10.60 0.00 33.19 3.06
3527 4609 1.701847 ACAGGGAGCACTTCTGACATT 59.298 47.619 10.60 0.00 33.19 2.71
3528 4610 2.289945 ACAGGGAGCACTTCTGACATTC 60.290 50.000 10.60 0.00 33.19 2.67
3529 4611 2.027377 CAGGGAGCACTTCTGACATTCT 60.027 50.000 0.00 0.00 0.00 2.40
3530 4612 2.641815 AGGGAGCACTTCTGACATTCTT 59.358 45.455 0.00 0.00 0.00 2.52
3531 4613 3.006247 GGGAGCACTTCTGACATTCTTC 58.994 50.000 0.00 0.00 0.00 2.87
3532 4614 3.557898 GGGAGCACTTCTGACATTCTTCA 60.558 47.826 0.00 0.00 0.00 3.02
3533 4615 3.434984 GGAGCACTTCTGACATTCTTCAC 59.565 47.826 0.00 0.00 0.00 3.18
3534 4616 4.314121 GAGCACTTCTGACATTCTTCACT 58.686 43.478 0.00 0.00 0.00 3.41
3535 4617 4.712476 AGCACTTCTGACATTCTTCACTT 58.288 39.130 0.00 0.00 0.00 3.16
3536 4618 4.514441 AGCACTTCTGACATTCTTCACTTG 59.486 41.667 0.00 0.00 0.00 3.16
3537 4619 4.781071 CACTTCTGACATTCTTCACTTGC 58.219 43.478 0.00 0.00 0.00 4.01
3538 4620 4.274214 CACTTCTGACATTCTTCACTTGCA 59.726 41.667 0.00 0.00 0.00 4.08
3539 4621 5.048921 CACTTCTGACATTCTTCACTTGCAT 60.049 40.000 0.00 0.00 0.00 3.96
3540 4622 5.533903 ACTTCTGACATTCTTCACTTGCATT 59.466 36.000 0.00 0.00 0.00 3.56
3541 4623 6.712095 ACTTCTGACATTCTTCACTTGCATTA 59.288 34.615 0.00 0.00 0.00 1.90
3542 4624 7.392673 ACTTCTGACATTCTTCACTTGCATTAT 59.607 33.333 0.00 0.00 0.00 1.28
3543 4625 7.312657 TCTGACATTCTTCACTTGCATTATC 57.687 36.000 0.00 0.00 0.00 1.75
3544 4626 6.317140 TCTGACATTCTTCACTTGCATTATCC 59.683 38.462 0.00 0.00 0.00 2.59
3545 4627 6.182627 TGACATTCTTCACTTGCATTATCCT 58.817 36.000 0.00 0.00 0.00 3.24
3546 4628 6.094464 TGACATTCTTCACTTGCATTATCCTG 59.906 38.462 0.00 0.00 0.00 3.86
3552 4634 1.929494 ACTTGCATTATCCTGGGGGAA 59.071 47.619 0.00 0.00 45.78 3.97
3575 4657 3.006940 GTTGGGCTTGTAATGTCGATCA 58.993 45.455 0.00 0.00 0.00 2.92
3582 4664 3.416119 TGTAATGTCGATCACGGTCTC 57.584 47.619 0.00 0.00 40.21 3.36
3615 4697 4.207891 ACAACTGGTTCTCGCTTATGAT 57.792 40.909 0.00 0.00 0.00 2.45
3618 4700 4.744795 ACTGGTTCTCGCTTATGATCTT 57.255 40.909 0.00 0.00 0.00 2.40
3619 4701 5.854010 ACTGGTTCTCGCTTATGATCTTA 57.146 39.130 0.00 0.00 0.00 2.10
3636 4718 2.172717 TCTTAAGCCCCTTGGAGTATGC 59.827 50.000 0.00 0.00 0.00 3.14
3643 4725 0.179034 CCTTGGAGTATGCCTCTGCC 60.179 60.000 0.00 0.00 40.30 4.85
3655 4737 0.529337 CCTCTGCCATAGACGCACTG 60.529 60.000 0.00 0.00 31.61 3.66
3661 4743 2.956333 TGCCATAGACGCACTGTACTAT 59.044 45.455 0.00 0.00 0.00 2.12
3663 4745 3.253677 GCCATAGACGCACTGTACTATCT 59.746 47.826 0.00 0.00 0.00 1.98
3664 4746 4.788690 CCATAGACGCACTGTACTATCTG 58.211 47.826 0.00 0.00 0.00 2.90
3670 4752 6.037098 AGACGCACTGTACTATCTGAAATTC 58.963 40.000 0.00 0.00 0.00 2.17
3707 4789 6.734137 ACAATACAAATGTGGTAACTGTGTG 58.266 36.000 0.00 0.00 37.61 3.82
3721 4803 7.068839 TGGTAACTGTGTGTTTTTATGGATGTT 59.931 33.333 0.00 0.00 39.89 2.71
3725 4807 7.684187 AACTGTGTGTTTTTATGGATGTTCCAG 60.684 37.037 2.29 0.00 42.56 3.86
3734 4816 1.203376 TGGATGTTCCAGGGGAGTGTA 60.203 52.381 0.00 0.00 42.67 2.90
3748 4830 4.698780 GGGGAGTGTACTATTGGACAAAAC 59.301 45.833 0.00 0.00 0.00 2.43
3749 4831 5.514310 GGGGAGTGTACTATTGGACAAAACT 60.514 44.000 0.00 0.00 0.00 2.66
3750 4832 5.642491 GGGAGTGTACTATTGGACAAAACTC 59.358 44.000 0.00 0.00 0.00 3.01
3751 4833 6.228258 GGAGTGTACTATTGGACAAAACTCA 58.772 40.000 9.66 0.00 0.00 3.41
3752 4834 6.708949 GGAGTGTACTATTGGACAAAACTCAA 59.291 38.462 9.66 0.00 0.00 3.02
3753 4835 7.227910 GGAGTGTACTATTGGACAAAACTCAAA 59.772 37.037 9.66 0.00 0.00 2.69
3756 4838 7.378728 GTGTACTATTGGACAAAACTCAAAAGC 59.621 37.037 0.00 0.00 0.00 3.51
3758 4840 7.054491 ACTATTGGACAAAACTCAAAAGCAT 57.946 32.000 0.00 0.00 0.00 3.79
3760 4842 8.299570 ACTATTGGACAAAACTCAAAAGCATAG 58.700 33.333 0.00 0.00 0.00 2.23
3762 4844 6.317789 TGGACAAAACTCAAAAGCATAGAG 57.682 37.500 0.00 0.00 35.56 2.43
3763 4845 5.241506 TGGACAAAACTCAAAAGCATAGAGG 59.758 40.000 0.00 0.00 33.76 3.69
3767 6069 7.203218 ACAAAACTCAAAAGCATAGAGGAAAC 58.797 34.615 0.00 0.00 33.76 2.78
3789 6091 3.557228 AGAGATCAAGGTCAAGATGGC 57.443 47.619 0.00 0.00 0.00 4.40
3808 6110 2.300152 GGCCTTCTATGATGATGACGGA 59.700 50.000 0.00 0.00 0.00 4.69
3811 6113 4.999950 GCCTTCTATGATGATGACGGAAAT 59.000 41.667 0.00 0.00 0.00 2.17
3857 6163 3.545724 TGCAGGTTGAGCAGATGAG 57.454 52.632 0.00 0.00 37.02 2.90
3867 6173 1.069049 GAGCAGATGAGGAAGGAGCTC 59.931 57.143 4.71 4.71 39.96 4.09
3868 6174 0.829333 GCAGATGAGGAAGGAGCTCA 59.171 55.000 17.19 0.00 0.00 4.26
3869 6175 1.202557 GCAGATGAGGAAGGAGCTCAG 60.203 57.143 17.19 0.00 0.00 3.35
3870 6176 1.413445 CAGATGAGGAAGGAGCTCAGG 59.587 57.143 17.19 0.00 0.00 3.86
3871 6177 1.008206 AGATGAGGAAGGAGCTCAGGT 59.992 52.381 17.19 0.00 0.00 4.00
3872 6178 1.836802 GATGAGGAAGGAGCTCAGGTT 59.163 52.381 17.19 5.44 0.00 3.50
3873 6179 1.270907 TGAGGAAGGAGCTCAGGTTC 58.729 55.000 17.19 14.15 0.00 3.62
3874 6180 1.270907 GAGGAAGGAGCTCAGGTTCA 58.729 55.000 17.19 0.00 0.00 3.18
3875 6181 1.206849 GAGGAAGGAGCTCAGGTTCAG 59.793 57.143 17.19 0.00 0.00 3.02
3876 6182 0.251634 GGAAGGAGCTCAGGTTCAGG 59.748 60.000 17.19 0.00 0.00 3.86
3877 6183 0.980423 GAAGGAGCTCAGGTTCAGGT 59.020 55.000 17.19 0.00 0.00 4.00
3878 6184 2.180276 GAAGGAGCTCAGGTTCAGGTA 58.820 52.381 17.19 0.00 0.00 3.08
3879 6185 1.859302 AGGAGCTCAGGTTCAGGTAG 58.141 55.000 17.19 0.00 0.00 3.18
3880 6186 1.359474 AGGAGCTCAGGTTCAGGTAGA 59.641 52.381 17.19 0.00 0.00 2.59
3881 6187 2.180276 GGAGCTCAGGTTCAGGTAGAA 58.820 52.381 17.19 0.00 0.00 2.10
3882 6188 2.167487 GGAGCTCAGGTTCAGGTAGAAG 59.833 54.545 17.19 0.00 36.78 2.85
3883 6189 2.167487 GAGCTCAGGTTCAGGTAGAAGG 59.833 54.545 9.40 0.00 36.78 3.46
3884 6190 1.406205 GCTCAGGTTCAGGTAGAAGGC 60.406 57.143 0.00 0.00 36.78 4.35
3885 6191 0.895530 TCAGGTTCAGGTAGAAGGCG 59.104 55.000 0.00 0.00 36.78 5.52
3893 6199 4.790765 TCAGGTAGAAGGCGATGATATG 57.209 45.455 0.00 0.00 0.00 1.78
3900 6206 4.122776 AGAAGGCGATGATATGTGTGAAC 58.877 43.478 0.00 0.00 0.00 3.18
3912 6222 7.496747 TGATATGTGTGAACAGGATATTCGAA 58.503 34.615 0.00 0.00 0.00 3.71
3926 6236 6.428159 AGGATATTCGAAACATGACCAATAGC 59.572 38.462 0.00 0.00 0.00 2.97
3929 6239 4.944962 TCGAAACATGACCAATAGCTTG 57.055 40.909 0.00 0.00 0.00 4.01
3941 6251 7.817641 TGACCAATAGCTTGATATCTAGTACG 58.182 38.462 14.41 1.69 34.04 3.67
3943 6253 8.859236 ACCAATAGCTTGATATCTAGTACGTA 57.141 34.615 14.41 0.00 34.04 3.57
3978 6334 3.775261 AACCGTTCAACCTAGGCTTTA 57.225 42.857 9.30 0.00 0.00 1.85
3979 6335 3.049708 ACCGTTCAACCTAGGCTTTAC 57.950 47.619 9.30 1.58 0.00 2.01
4014 6652 8.455682 ACAAACAGAAATGTTTCGTTTCTCTTA 58.544 29.630 17.26 0.00 44.68 2.10
4017 6655 7.630924 ACAGAAATGTTTCGTTTCTCTTACTG 58.369 34.615 12.23 0.00 44.68 2.74
4054 6692 6.128138 AGCAAAGACCAAGTCCTAATTAGT 57.872 37.500 11.50 0.00 32.18 2.24
4087 6725 2.689034 ACTAGGGTGGGCTGGAGC 60.689 66.667 0.00 0.00 41.14 4.70
4116 6754 1.825090 GTTGGCAGTGATCCATGACA 58.175 50.000 0.00 0.00 32.92 3.58
4125 6763 6.015688 GGCAGTGATCCATGACATATTTTCAT 60.016 38.462 0.00 0.00 33.81 2.57
4245 6957 5.931441 AGCTGACTACTTGTTCAAACATC 57.069 39.130 0.00 0.00 38.95 3.06
4247 6959 4.702392 CTGACTACTTGTTCAAACATCGC 58.298 43.478 0.00 0.00 38.95 4.58
4319 7038 1.880819 ATCGTCGTACCGTGGCCTTT 61.881 55.000 3.32 0.00 0.00 3.11
4369 7088 0.101399 GCTGTCGGAGTCGTCATCAT 59.899 55.000 0.00 0.00 34.37 2.45
4387 7106 6.143118 GTCATCATCTGATTACTTCTACACGC 59.857 42.308 0.00 0.00 35.97 5.34
4401 7120 5.090652 TCTACACGCTTTTGATTTGTGAC 57.909 39.130 0.00 0.00 34.72 3.67
4431 7150 2.440409 GTCTCCTGGTTGATTGTGCAT 58.560 47.619 0.00 0.00 0.00 3.96
4432 7151 2.421424 GTCTCCTGGTTGATTGTGCATC 59.579 50.000 0.00 0.00 0.00 3.91
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.750229 TGTGTTCTAAGCTTCATTCAGAATT 57.250 32.000 0.00 0.00 35.25 2.17
1 2 7.750229 TTGTGTTCTAAGCTTCATTCAGAAT 57.250 32.000 0.00 0.00 35.25 2.40
41 42 9.612620 CTGGAACATCATAAAAAGAACAGTTAC 57.387 33.333 0.00 0.00 38.20 2.50
50 51 4.396166 ACTCCGCTGGAACATCATAAAAAG 59.604 41.667 0.00 0.00 38.20 2.27
64 67 1.154016 CGACAGTACACTCCGCTGG 60.154 63.158 0.00 0.00 34.79 4.85
68 71 0.594602 TTGTCCGACAGTACACTCCG 59.405 55.000 0.64 0.00 0.00 4.63
147 150 1.402984 GCACGAGAACCTCAGATTCGT 60.403 52.381 0.00 0.00 44.38 3.85
154 157 0.249868 CAACCTGCACGAGAACCTCA 60.250 55.000 0.00 0.00 0.00 3.86
341 352 5.018149 GGCCCCTTTGTTTGGTTATTACTA 58.982 41.667 0.00 0.00 0.00 1.82
359 370 3.139077 CAACTTCAATATAGTCGGCCCC 58.861 50.000 0.00 0.00 0.00 5.80
360 371 3.139077 CCAACTTCAATATAGTCGGCCC 58.861 50.000 0.00 0.00 0.00 5.80
389 400 3.263425 ACATCGACCAAGTCCCAATAGTT 59.737 43.478 0.00 0.00 0.00 2.24
392 403 2.093181 CCACATCGACCAAGTCCCAATA 60.093 50.000 0.00 0.00 0.00 1.90
402 413 1.003839 GGTTCAGCCACATCGACCA 60.004 57.895 0.00 0.00 37.17 4.02
409 420 2.410322 AATCCAGCGGTTCAGCCACA 62.410 55.000 0.00 0.00 38.01 4.17
412 423 0.171231 GAAAATCCAGCGGTTCAGCC 59.829 55.000 0.00 0.00 38.01 4.85
422 433 2.084546 GGGACTCCAACGAAAATCCAG 58.915 52.381 0.00 0.00 0.00 3.86
431 442 0.541863 AGCATAAGGGGACTCCAACG 59.458 55.000 0.00 0.00 42.68 4.10
438 449 3.444034 GGAAGAACAAAGCATAAGGGGAC 59.556 47.826 0.00 0.00 0.00 4.46
469 481 1.961435 GCATCAGGCAAATGGAAGGGA 60.961 52.381 1.98 0.00 43.97 4.20
484 496 1.228094 TTCAACCGGTGCTGCATCA 60.228 52.632 8.52 0.00 0.00 3.07
488 500 2.639286 CAGTTCAACCGGTGCTGC 59.361 61.111 8.52 0.00 0.00 5.25
489 501 1.447317 AAGCAGTTCAACCGGTGCTG 61.447 55.000 8.52 15.46 45.51 4.41
496 508 4.641777 GCAGCAAGCAGTTCAACC 57.358 55.556 0.00 0.00 44.79 3.77
549 561 4.408821 TTTGGCGGCAGCGAGGAT 62.409 61.111 12.87 0.00 46.35 3.24
590 603 9.065798 TCATGATTTCTTGTGAGTTCATTAACA 57.934 29.630 0.00 0.00 38.12 2.41
596 609 7.991084 AGATTCATGATTTCTTGTGAGTTCA 57.009 32.000 0.00 0.00 0.00 3.18
642 1008 0.968405 GCCTCATCAACCAAAGCCAA 59.032 50.000 0.00 0.00 0.00 4.52
730 1101 4.494690 CGCTTACAAGATGCGTGATCATTT 60.495 41.667 0.00 0.00 44.42 2.32
731 1102 3.001634 CGCTTACAAGATGCGTGATCATT 59.998 43.478 0.00 0.00 44.42 2.57
734 1105 2.635141 CGCTTACAAGATGCGTGATC 57.365 50.000 0.00 0.00 44.42 2.92
841 1213 1.632948 GCACCTCCCGTTACGAAAGC 61.633 60.000 6.24 0.00 0.00 3.51
846 1218 1.012486 GTTCAGCACCTCCCGTTACG 61.012 60.000 0.00 0.00 0.00 3.18
848 1220 0.320374 CAGTTCAGCACCTCCCGTTA 59.680 55.000 0.00 0.00 0.00 3.18
878 1253 1.083657 CGTCAACAAAGCGTGGTCG 60.084 57.895 0.00 0.00 40.37 4.79
883 1258 2.877974 GCCGTCGTCAACAAAGCGT 61.878 57.895 0.00 0.00 0.00 5.07
891 1266 4.980805 GCCTGGTGCCGTCGTCAA 62.981 66.667 0.00 0.00 0.00 3.18
919 1294 2.033602 GAAGGGGAACGGGGTGTG 59.966 66.667 0.00 0.00 0.00 3.82
921 1296 4.043100 GGGAAGGGGAACGGGGTG 62.043 72.222 0.00 0.00 0.00 4.61
922 1297 4.603097 TGGGAAGGGGAACGGGGT 62.603 66.667 0.00 0.00 0.00 4.95
923 1298 2.847650 TTTGGGAAGGGGAACGGGG 61.848 63.158 0.00 0.00 0.00 5.73
924 1299 1.605451 GTTTGGGAAGGGGAACGGG 60.605 63.158 0.00 0.00 0.00 5.28
1012 1388 0.481128 CCTACTCCTCCTCCTCCTCC 59.519 65.000 0.00 0.00 0.00 4.30
1013 1389 1.423921 CTCCTACTCCTCCTCCTCCTC 59.576 61.905 0.00 0.00 0.00 3.71
1014 1390 1.011545 TCTCCTACTCCTCCTCCTCCT 59.988 57.143 0.00 0.00 0.00 3.69
1015 1391 1.525175 TCTCCTACTCCTCCTCCTCC 58.475 60.000 0.00 0.00 0.00 4.30
1016 1392 2.158519 CCTTCTCCTACTCCTCCTCCTC 60.159 59.091 0.00 0.00 0.00 3.71
1028 1404 2.091055 CCTCCATCTCCACCTTCTCCTA 60.091 54.545 0.00 0.00 0.00 2.94
1038 1414 0.684479 CGTGGTCTCCTCCATCTCCA 60.684 60.000 0.00 0.00 39.81 3.86
1044 1420 4.631740 TGCCCGTGGTCTCCTCCA 62.632 66.667 0.00 0.00 34.85 3.86
1059 1435 3.723348 GACGCCGGTTCCTTGTGC 61.723 66.667 1.90 0.00 0.00 4.57
1087 1463 0.898789 TCCTGGTCTTGGTCTCCGTC 60.899 60.000 0.00 0.00 0.00 4.79
1094 1470 1.539124 GGGTCCTCCTGGTCTTGGT 60.539 63.158 0.00 0.00 34.23 3.67
1097 1473 0.419459 AGATGGGTCCTCCTGGTCTT 59.581 55.000 0.00 0.00 36.20 3.01
1098 1474 0.031616 GAGATGGGTCCTCCTGGTCT 60.032 60.000 0.00 0.00 36.20 3.85
1102 1478 0.461961 GAACGAGATGGGTCCTCCTG 59.538 60.000 0.00 0.00 36.20 3.86
1117 1493 1.493311 GCGGCAACAGAGAAGAACG 59.507 57.895 0.00 0.00 0.00 3.95
1118 1494 1.869690 GGCGGCAACAGAGAAGAAC 59.130 57.895 3.07 0.00 0.00 3.01
1119 1495 1.667830 CGGCGGCAACAGAGAAGAA 60.668 57.895 10.53 0.00 0.00 2.52
1161 1537 1.075050 ACCTCAGACTCTACGGGAACA 59.925 52.381 0.00 0.00 0.00 3.18
1164 1540 1.678123 CGAACCTCAGACTCTACGGGA 60.678 57.143 0.00 0.00 0.00 5.14
1188 1564 2.369860 TCGATCATGGGAAAGAGGATGG 59.630 50.000 0.00 0.00 0.00 3.51
1190 1566 4.020396 CAGATCGATCATGGGAAAGAGGAT 60.020 45.833 26.47 0.00 0.00 3.24
1193 1569 3.070734 ACCAGATCGATCATGGGAAAGAG 59.929 47.826 30.52 15.25 38.48 2.85
1202 1578 9.907229 TTATAGTACATCTACCAGATCGATCAT 57.093 33.333 26.47 14.01 31.32 2.45
1260 1636 7.040961 CCAATTCGTTTAGGTTCTTGTTCCTAA 60.041 37.037 0.00 0.00 42.35 2.69
1261 1637 6.428771 CCAATTCGTTTAGGTTCTTGTTCCTA 59.571 38.462 0.00 0.00 35.51 2.94
1262 1638 5.240844 CCAATTCGTTTAGGTTCTTGTTCCT 59.759 40.000 0.00 0.00 37.80 3.36
1263 1639 5.009310 ACCAATTCGTTTAGGTTCTTGTTCC 59.991 40.000 0.00 0.00 0.00 3.62
1264 1640 6.068473 ACCAATTCGTTTAGGTTCTTGTTC 57.932 37.500 0.00 0.00 0.00 3.18
1265 1641 6.459670 AACCAATTCGTTTAGGTTCTTGTT 57.540 33.333 0.00 0.00 40.12 2.83
1266 1642 6.459670 AAACCAATTCGTTTAGGTTCTTGT 57.540 33.333 0.00 0.00 43.17 3.16
1267 1643 6.754675 ACAAAACCAATTCGTTTAGGTTCTTG 59.245 34.615 1.43 8.31 43.17 3.02
1268 1644 6.869695 ACAAAACCAATTCGTTTAGGTTCTT 58.130 32.000 1.43 0.00 43.17 2.52
1269 1645 6.459670 ACAAAACCAATTCGTTTAGGTTCT 57.540 33.333 1.43 0.00 43.17 3.01
1270 1646 7.194962 TGTACAAAACCAATTCGTTTAGGTTC 58.805 34.615 1.43 3.29 43.17 3.62
1271 1647 7.098074 TGTACAAAACCAATTCGTTTAGGTT 57.902 32.000 1.43 0.00 45.73 3.50
1272 1648 6.696441 TGTACAAAACCAATTCGTTTAGGT 57.304 33.333 1.43 6.42 34.89 3.08
1273 1649 8.582433 AAATGTACAAAACCAATTCGTTTAGG 57.418 30.769 0.00 1.05 34.89 2.69
1275 1651 9.804758 AGAAAATGTACAAAACCAATTCGTTTA 57.195 25.926 0.00 0.00 34.89 2.01
1276 1652 8.710835 AGAAAATGTACAAAACCAATTCGTTT 57.289 26.923 0.00 0.00 37.56 3.60
1277 1653 7.976734 TGAGAAAATGTACAAAACCAATTCGTT 59.023 29.630 0.00 0.00 0.00 3.85
1278 1654 7.484975 TGAGAAAATGTACAAAACCAATTCGT 58.515 30.769 0.00 0.00 0.00 3.85
1279 1655 7.922505 TGAGAAAATGTACAAAACCAATTCG 57.077 32.000 0.00 0.00 0.00 3.34
1300 1676 9.277565 CGGTGTTAATGAACATTCTAAATTGAG 57.722 33.333 0.00 0.00 46.98 3.02
1301 1677 8.240682 CCGGTGTTAATGAACATTCTAAATTGA 58.759 33.333 0.00 0.00 46.98 2.57
1302 1678 8.026607 ACCGGTGTTAATGAACATTCTAAATTG 58.973 33.333 6.12 0.00 46.98 2.32
1303 1679 8.117813 ACCGGTGTTAATGAACATTCTAAATT 57.882 30.769 6.12 0.00 46.98 1.82
1304 1680 7.696992 ACCGGTGTTAATGAACATTCTAAAT 57.303 32.000 6.12 0.00 46.98 1.40
1305 1681 7.513371 AACCGGTGTTAATGAACATTCTAAA 57.487 32.000 8.52 0.00 46.98 1.85
1306 1682 7.513371 AAACCGGTGTTAATGAACATTCTAA 57.487 32.000 8.52 0.00 46.98 2.10
1307 1683 7.879160 ACTAAACCGGTGTTAATGAACATTCTA 59.121 33.333 8.52 0.00 46.98 2.10
1308 1684 6.713450 ACTAAACCGGTGTTAATGAACATTCT 59.287 34.615 8.52 0.00 46.98 2.40
1309 1685 6.905578 ACTAAACCGGTGTTAATGAACATTC 58.094 36.000 8.52 0.00 46.98 2.67
1310 1686 6.887626 ACTAAACCGGTGTTAATGAACATT 57.112 33.333 8.52 5.40 46.98 2.71
1311 1687 6.935771 TGTACTAAACCGGTGTTAATGAACAT 59.064 34.615 8.52 0.00 46.98 2.71
1312 1688 6.286758 TGTACTAAACCGGTGTTAATGAACA 58.713 36.000 8.52 2.88 43.41 3.18
1313 1689 6.783892 TGTACTAAACCGGTGTTAATGAAC 57.216 37.500 8.52 0.00 33.30 3.18
1314 1690 7.388437 AGATGTACTAAACCGGTGTTAATGAA 58.612 34.615 8.52 0.00 33.30 2.57
1315 1691 6.938507 AGATGTACTAAACCGGTGTTAATGA 58.061 36.000 8.52 0.00 33.30 2.57
1316 1692 7.548075 AGAAGATGTACTAAACCGGTGTTAATG 59.452 37.037 8.52 1.50 33.30 1.90
1317 1693 7.618137 AGAAGATGTACTAAACCGGTGTTAAT 58.382 34.615 8.52 1.69 33.30 1.40
1318 1694 6.996509 AGAAGATGTACTAAACCGGTGTTAA 58.003 36.000 8.52 0.00 33.30 2.01
1319 1695 6.209192 TGAGAAGATGTACTAAACCGGTGTTA 59.791 38.462 8.52 8.41 33.30 2.41
1320 1696 5.011329 TGAGAAGATGTACTAAACCGGTGTT 59.989 40.000 8.52 7.59 35.82 3.32
1321 1697 4.525487 TGAGAAGATGTACTAAACCGGTGT 59.475 41.667 8.52 4.57 0.00 4.16
1322 1698 5.068234 TGAGAAGATGTACTAAACCGGTG 57.932 43.478 8.52 0.00 0.00 4.94
1323 1699 5.733620 TTGAGAAGATGTACTAAACCGGT 57.266 39.130 0.00 0.00 0.00 5.28
1324 1700 7.333423 TGAAATTGAGAAGATGTACTAAACCGG 59.667 37.037 0.00 0.00 0.00 5.28
1325 1701 8.251750 TGAAATTGAGAAGATGTACTAAACCG 57.748 34.615 0.00 0.00 0.00 4.44
1326 1702 9.436957 TCTGAAATTGAGAAGATGTACTAAACC 57.563 33.333 0.00 0.00 0.00 3.27
1331 1707 9.512588 AACATTCTGAAATTGAGAAGATGTACT 57.487 29.630 0.99 0.00 33.01 2.73
1332 1708 9.766277 GAACATTCTGAAATTGAGAAGATGTAC 57.234 33.333 0.99 0.00 33.01 2.90
1333 1709 9.506018 TGAACATTCTGAAATTGAGAAGATGTA 57.494 29.630 0.99 0.00 33.01 2.29
1334 1710 8.400184 TGAACATTCTGAAATTGAGAAGATGT 57.600 30.769 0.99 0.00 33.01 3.06
1335 1711 9.856488 AATGAACATTCTGAAATTGAGAAGATG 57.144 29.630 0.99 0.00 33.01 2.90
1340 1716 9.897744 GTGTTAATGAACATTCTGAAATTGAGA 57.102 29.630 0.00 0.00 46.98 3.27
1341 1717 9.132521 GGTGTTAATGAACATTCTGAAATTGAG 57.867 33.333 0.00 0.00 46.98 3.02
1342 1718 7.807433 CGGTGTTAATGAACATTCTGAAATTGA 59.193 33.333 0.00 0.00 46.98 2.57
1343 1719 7.410728 GCGGTGTTAATGAACATTCTGAAATTG 60.411 37.037 0.00 0.00 46.98 2.32
1344 1720 6.586082 GCGGTGTTAATGAACATTCTGAAATT 59.414 34.615 0.00 0.00 46.98 1.82
1345 1721 6.092748 GCGGTGTTAATGAACATTCTGAAAT 58.907 36.000 0.00 0.00 46.98 2.17
1346 1722 5.009110 TGCGGTGTTAATGAACATTCTGAAA 59.991 36.000 0.00 0.00 46.98 2.69
1347 1723 4.517075 TGCGGTGTTAATGAACATTCTGAA 59.483 37.500 0.00 0.00 46.98 3.02
1348 1724 4.068599 TGCGGTGTTAATGAACATTCTGA 58.931 39.130 0.00 0.00 46.98 3.27
1349 1725 4.418013 TGCGGTGTTAATGAACATTCTG 57.582 40.909 0.00 0.00 46.98 3.02
1350 1726 5.446143 TTTGCGGTGTTAATGAACATTCT 57.554 34.783 0.00 0.00 46.98 2.40
1351 1727 6.517914 TTTTTGCGGTGTTAATGAACATTC 57.482 33.333 0.00 0.00 46.98 2.67
1372 1748 9.511272 AAACGTTTAGTATACATCTCCCTTTTT 57.489 29.630 12.83 0.00 0.00 1.94
1373 1749 9.511272 AAAACGTTTAGTATACATCTCCCTTTT 57.489 29.630 15.03 0.00 0.00 2.27
1374 1750 8.943002 CAAAACGTTTAGTATACATCTCCCTTT 58.057 33.333 15.03 0.00 0.00 3.11
1375 1751 7.551617 CCAAAACGTTTAGTATACATCTCCCTT 59.448 37.037 15.03 0.00 0.00 3.95
1376 1752 7.046033 CCAAAACGTTTAGTATACATCTCCCT 58.954 38.462 15.03 0.00 0.00 4.20
1377 1753 6.238293 GCCAAAACGTTTAGTATACATCTCCC 60.238 42.308 15.03 0.00 0.00 4.30
1378 1754 6.314400 TGCCAAAACGTTTAGTATACATCTCC 59.686 38.462 15.03 0.00 0.00 3.71
1379 1755 7.064253 ACTGCCAAAACGTTTAGTATACATCTC 59.936 37.037 15.03 0.00 0.00 2.75
1380 1756 6.877322 ACTGCCAAAACGTTTAGTATACATCT 59.123 34.615 15.03 0.00 0.00 2.90
1381 1757 7.068692 ACTGCCAAAACGTTTAGTATACATC 57.931 36.000 15.03 0.00 0.00 3.06
1382 1758 7.173562 TGAACTGCCAAAACGTTTAGTATACAT 59.826 33.333 15.03 0.00 0.00 2.29
1383 1759 6.482641 TGAACTGCCAAAACGTTTAGTATACA 59.517 34.615 15.03 11.50 0.00 2.29
1384 1760 6.890558 TGAACTGCCAAAACGTTTAGTATAC 58.109 36.000 15.03 9.40 0.00 1.47
1385 1761 7.493743 TTGAACTGCCAAAACGTTTAGTATA 57.506 32.000 15.03 4.18 0.00 1.47
1386 1762 6.380095 TTGAACTGCCAAAACGTTTAGTAT 57.620 33.333 15.03 5.26 0.00 2.12
1387 1763 5.814764 TTGAACTGCCAAAACGTTTAGTA 57.185 34.783 15.03 7.71 0.00 1.82
1388 1764 4.705337 TTGAACTGCCAAAACGTTTAGT 57.295 36.364 15.03 11.05 0.00 2.24
1389 1765 6.915843 ACTAATTGAACTGCCAAAACGTTTAG 59.084 34.615 15.03 10.37 0.00 1.85
1390 1766 6.797454 ACTAATTGAACTGCCAAAACGTTTA 58.203 32.000 15.03 0.00 0.00 2.01
1391 1767 5.656480 ACTAATTGAACTGCCAAAACGTTT 58.344 33.333 7.96 7.96 0.00 3.60
1392 1768 5.257082 ACTAATTGAACTGCCAAAACGTT 57.743 34.783 0.00 0.00 0.00 3.99
1393 1769 4.911514 ACTAATTGAACTGCCAAAACGT 57.088 36.364 0.00 0.00 0.00 3.99
1394 1770 5.277825 TGAACTAATTGAACTGCCAAAACG 58.722 37.500 0.00 0.00 0.00 3.60
1395 1771 7.532682 TTTGAACTAATTGAACTGCCAAAAC 57.467 32.000 0.00 0.00 0.00 2.43
1396 1772 8.610896 CAATTTGAACTAATTGAACTGCCAAAA 58.389 29.630 13.37 0.00 44.49 2.44
1397 1773 7.984050 TCAATTTGAACTAATTGAACTGCCAAA 59.016 29.630 16.97 0.00 46.18 3.28
1398 1774 7.495901 TCAATTTGAACTAATTGAACTGCCAA 58.504 30.769 16.97 0.00 46.18 4.52
1399 1775 7.048629 TCAATTTGAACTAATTGAACTGCCA 57.951 32.000 16.97 0.07 46.18 4.92
1414 1790 7.168972 CCAATTCGTTTAGCAGTTCAATTTGAA 59.831 33.333 7.74 7.74 33.32 2.69
1415 1791 6.640499 CCAATTCGTTTAGCAGTTCAATTTGA 59.360 34.615 0.00 0.00 0.00 2.69
1416 1792 6.128849 CCCAATTCGTTTAGCAGTTCAATTTG 60.129 38.462 0.00 0.00 0.00 2.32
1417 1793 5.925969 CCCAATTCGTTTAGCAGTTCAATTT 59.074 36.000 0.00 0.00 0.00 1.82
1418 1794 5.010617 ACCCAATTCGTTTAGCAGTTCAATT 59.989 36.000 0.00 0.00 0.00 2.32
1419 1795 4.522789 ACCCAATTCGTTTAGCAGTTCAAT 59.477 37.500 0.00 0.00 0.00 2.57
1420 1796 3.886505 ACCCAATTCGTTTAGCAGTTCAA 59.113 39.130 0.00 0.00 0.00 2.69
1421 1797 3.482436 ACCCAATTCGTTTAGCAGTTCA 58.518 40.909 0.00 0.00 0.00 3.18
1422 1798 4.499037 AACCCAATTCGTTTAGCAGTTC 57.501 40.909 0.00 0.00 0.00 3.01
1423 1799 4.929819 AAACCCAATTCGTTTAGCAGTT 57.070 36.364 0.00 0.00 31.75 3.16
1424 1800 4.339814 TCAAAACCCAATTCGTTTAGCAGT 59.660 37.500 1.57 0.00 33.17 4.40
1425 1801 4.865776 TCAAAACCCAATTCGTTTAGCAG 58.134 39.130 1.57 0.00 33.17 4.24
1426 1802 4.261825 CCTCAAAACCCAATTCGTTTAGCA 60.262 41.667 1.57 0.00 33.17 3.49
1427 1803 4.022676 TCCTCAAAACCCAATTCGTTTAGC 60.023 41.667 1.57 0.00 33.17 3.09
1428 1804 5.699097 TCCTCAAAACCCAATTCGTTTAG 57.301 39.130 1.57 0.00 33.17 1.85
1429 1805 6.451393 CATTCCTCAAAACCCAATTCGTTTA 58.549 36.000 1.57 0.00 33.17 2.01
1430 1806 5.296748 CATTCCTCAAAACCCAATTCGTTT 58.703 37.500 0.00 0.00 34.95 3.60
1431 1807 4.799255 GCATTCCTCAAAACCCAATTCGTT 60.799 41.667 0.00 0.00 0.00 3.85
1432 1808 3.306019 GCATTCCTCAAAACCCAATTCGT 60.306 43.478 0.00 0.00 0.00 3.85
1433 1809 3.253230 GCATTCCTCAAAACCCAATTCG 58.747 45.455 0.00 0.00 0.00 3.34
1434 1810 4.270245 TGCATTCCTCAAAACCCAATTC 57.730 40.909 0.00 0.00 0.00 2.17
1435 1811 4.914177 ATGCATTCCTCAAAACCCAATT 57.086 36.364 0.00 0.00 0.00 2.32
1436 1812 6.172630 GTTTATGCATTCCTCAAAACCCAAT 58.827 36.000 3.54 0.00 0.00 3.16
1437 1813 5.546526 GTTTATGCATTCCTCAAAACCCAA 58.453 37.500 3.54 0.00 0.00 4.12
1438 1814 4.321601 CGTTTATGCATTCCTCAAAACCCA 60.322 41.667 3.54 0.00 0.00 4.51
1439 1815 4.082463 TCGTTTATGCATTCCTCAAAACCC 60.082 41.667 3.54 0.00 0.00 4.11
1440 1816 5.054390 TCGTTTATGCATTCCTCAAAACC 57.946 39.130 3.54 0.00 0.00 3.27
1441 1817 6.021468 CGAATCGTTTATGCATTCCTCAAAAC 60.021 38.462 3.54 7.47 0.00 2.43
1442 1818 6.027131 CGAATCGTTTATGCATTCCTCAAAA 58.973 36.000 3.54 0.00 0.00 2.44
1443 1819 5.123186 ACGAATCGTTTATGCATTCCTCAAA 59.877 36.000 3.54 0.00 36.35 2.69
1444 1820 4.634004 ACGAATCGTTTATGCATTCCTCAA 59.366 37.500 3.54 0.00 36.35 3.02
1445 1821 4.188462 ACGAATCGTTTATGCATTCCTCA 58.812 39.130 3.54 0.00 36.35 3.86
1446 1822 4.508124 AGACGAATCGTTTATGCATTCCTC 59.492 41.667 10.45 0.00 41.37 3.71
1447 1823 4.442706 AGACGAATCGTTTATGCATTCCT 58.557 39.130 10.45 0.00 41.37 3.36
1448 1824 4.508124 AGAGACGAATCGTTTATGCATTCC 59.492 41.667 10.45 0.00 41.37 3.01
1449 1825 5.427082 CAGAGACGAATCGTTTATGCATTC 58.573 41.667 10.45 0.00 41.37 2.67
1450 1826 5.395325 CAGAGACGAATCGTTTATGCATT 57.605 39.130 10.45 0.00 41.37 3.56
1454 1830 5.395325 AATGCAGAGACGAATCGTTTATG 57.605 39.130 15.13 15.13 41.37 1.90
1455 1831 6.422776 AAAATGCAGAGACGAATCGTTTAT 57.577 33.333 10.45 0.00 41.37 1.40
1658 2047 1.202348 CGGTTGAAATGGAAGAAGCCC 59.798 52.381 0.00 0.00 0.00 5.19
1757 2152 2.165167 TCGACCTCAAAGTGTCCGTAT 58.835 47.619 0.00 0.00 0.00 3.06
1890 2285 1.945387 TCGAATTGATCAGCCTCAGC 58.055 50.000 0.00 0.00 40.32 4.26
1892 2287 5.614308 ACATAATCGAATTGATCAGCCTCA 58.386 37.500 0.00 0.00 35.84 3.86
1950 2345 0.768221 ACAGGAGGAACAGGAGGCAA 60.768 55.000 0.00 0.00 0.00 4.52
2103 2504 5.781210 TCTGATGAGTAGATCCATGTCAC 57.219 43.478 0.00 0.00 0.00 3.67
2353 2757 1.880340 GAGAGCTGGCAATCGTCCG 60.880 63.158 0.00 0.00 0.00 4.79
2444 2857 1.073125 TCTTTGCGACAATCCCTTCCA 59.927 47.619 0.00 0.00 0.00 3.53
2579 3514 1.453155 GGAAATCTCCAGAAGCGCAA 58.547 50.000 11.47 0.00 41.96 4.85
2602 3537 3.595138 ACAGGGAGTGTAAGGTAGACCTA 59.405 47.826 0.54 0.00 40.71 3.08
2659 3594 2.238646 AGATTTGGCATAGACCCAACGA 59.761 45.455 0.00 0.00 41.77 3.85
2668 3603 7.274250 GCTTCAAAACTACAAGATTTGGCATAG 59.726 37.037 9.03 0.00 38.18 2.23
2672 3607 5.403466 CAGCTTCAAAACTACAAGATTTGGC 59.597 40.000 9.03 6.39 38.18 4.52
2699 3634 7.521423 GCATTTATACAACAGAACAGACCAACA 60.521 37.037 0.00 0.00 0.00 3.33
2703 3638 6.149474 AGTGCATTTATACAACAGAACAGACC 59.851 38.462 0.00 0.00 0.00 3.85
2706 3641 7.584108 TCAAGTGCATTTATACAACAGAACAG 58.416 34.615 0.00 0.00 0.00 3.16
2735 3670 3.966665 ACCCAGACACCAACATGAAAAAT 59.033 39.130 0.00 0.00 0.00 1.82
2736 3671 3.131933 CACCCAGACACCAACATGAAAAA 59.868 43.478 0.00 0.00 0.00 1.94
2738 3673 2.305928 CACCCAGACACCAACATGAAA 58.694 47.619 0.00 0.00 0.00 2.69
2741 3676 0.822944 TGCACCCAGACACCAACATG 60.823 55.000 0.00 0.00 0.00 3.21
2742 3677 0.112995 ATGCACCCAGACACCAACAT 59.887 50.000 0.00 0.00 0.00 2.71
2743 3678 0.822944 CATGCACCCAGACACCAACA 60.823 55.000 0.00 0.00 0.00 3.33
2744 3679 1.959085 CATGCACCCAGACACCAAC 59.041 57.895 0.00 0.00 0.00 3.77
2746 3681 2.282391 GCATGCACCCAGACACCA 60.282 61.111 14.21 0.00 0.00 4.17
2747 3682 3.064324 GGCATGCACCCAGACACC 61.064 66.667 21.36 0.00 0.00 4.16
2785 3721 3.141083 TCAGAGGGCTAGTGATATGGAGT 59.859 47.826 0.00 0.00 0.00 3.85
2788 3724 4.092279 TCATCAGAGGGCTAGTGATATGG 58.908 47.826 0.00 0.00 29.64 2.74
2789 3725 5.015515 TCTCATCAGAGGGCTAGTGATATG 58.984 45.833 0.00 0.00 42.34 1.78
2804 3755 8.484641 TTCATACAGCTAAACTTTCTCATCAG 57.515 34.615 0.00 0.00 0.00 2.90
2824 3775 5.893255 AGAACAATGGCTGGCTTTATTCATA 59.107 36.000 18.44 0.00 0.00 2.15
2836 3787 4.301628 GAAAGGAAACAGAACAATGGCTG 58.698 43.478 4.26 4.26 38.10 4.85
2854 3805 8.798153 GCGAAATCAATAATTGTTACAGGAAAG 58.202 33.333 0.00 0.00 0.00 2.62
2865 3816 9.773328 TGACTAAAAGAGCGAAATCAATAATTG 57.227 29.630 0.00 0.00 0.00 2.32
2879 3830 9.220767 CTAACCCCATATTATGACTAAAAGAGC 57.779 37.037 5.21 0.00 0.00 4.09
2938 3890 9.860898 AGAAACAGGCAAAGATAAATATTTGAC 57.139 29.630 11.05 10.35 44.99 3.18
2947 3899 9.747898 TCCTATAAAAGAAACAGGCAAAGATAA 57.252 29.630 0.00 0.00 0.00 1.75
2948 3900 9.747898 TTCCTATAAAAGAAACAGGCAAAGATA 57.252 29.630 0.00 0.00 0.00 1.98
2949 3901 8.650143 TTCCTATAAAAGAAACAGGCAAAGAT 57.350 30.769 0.00 0.00 0.00 2.40
2950 3902 7.724061 ACTTCCTATAAAAGAAACAGGCAAAGA 59.276 33.333 2.39 0.00 0.00 2.52
2951 3903 7.886338 ACTTCCTATAAAAGAAACAGGCAAAG 58.114 34.615 2.39 0.00 0.00 2.77
2952 3904 7.833285 ACTTCCTATAAAAGAAACAGGCAAA 57.167 32.000 2.39 0.00 0.00 3.68
2953 3905 7.610305 CCTACTTCCTATAAAAGAAACAGGCAA 59.390 37.037 2.39 0.00 0.00 4.52
2954 3906 7.037873 TCCTACTTCCTATAAAAGAAACAGGCA 60.038 37.037 2.39 0.00 0.00 4.75
2955 3907 7.336396 TCCTACTTCCTATAAAAGAAACAGGC 58.664 38.462 2.39 0.00 0.00 4.85
2956 3908 9.384764 CTTCCTACTTCCTATAAAAGAAACAGG 57.615 37.037 2.39 0.00 0.00 4.00
2957 3909 9.945904 ACTTCCTACTTCCTATAAAAGAAACAG 57.054 33.333 2.39 0.00 0.00 3.16
2971 3923 9.327628 GGAGATAACATTTTACTTCCTACTTCC 57.672 37.037 0.00 0.00 0.00 3.46
2977 3929 8.049721 CCAGAAGGAGATAACATTTTACTTCCT 58.950 37.037 0.00 1.65 35.98 3.36
2978 3930 8.047310 TCCAGAAGGAGATAACATTTTACTTCC 58.953 37.037 0.00 0.00 39.61 3.46
3015 3967 9.554395 TGACTTCATAGTACTTGTGAAAAATGA 57.446 29.630 18.36 9.65 33.84 2.57
3018 3970 9.337396 ACATGACTTCATAGTACTTGTGAAAAA 57.663 29.630 18.36 10.82 33.84 1.94
3019 3971 8.902540 ACATGACTTCATAGTACTTGTGAAAA 57.097 30.769 18.36 11.06 33.84 2.29
3020 3972 8.902540 AACATGACTTCATAGTACTTGTGAAA 57.097 30.769 18.36 9.14 33.84 2.69
3021 3973 8.902540 AAACATGACTTCATAGTACTTGTGAA 57.097 30.769 17.37 17.37 33.84 3.18
3022 3974 8.367911 AGAAACATGACTTCATAGTACTTGTGA 58.632 33.333 0.00 3.49 33.84 3.58
3023 3975 8.539770 AGAAACATGACTTCATAGTACTTGTG 57.460 34.615 0.00 0.77 33.84 3.33
3024 3976 7.542477 CGAGAAACATGACTTCATAGTACTTGT 59.458 37.037 0.00 0.00 33.84 3.16
3025 3977 7.009631 CCGAGAAACATGACTTCATAGTACTTG 59.990 40.741 0.00 0.00 33.84 3.16
3026 3978 7.036220 CCGAGAAACATGACTTCATAGTACTT 58.964 38.462 0.00 0.00 33.84 2.24
3027 3979 6.377429 TCCGAGAAACATGACTTCATAGTACT 59.623 38.462 0.00 0.00 33.84 2.73
3028 3980 6.561614 TCCGAGAAACATGACTTCATAGTAC 58.438 40.000 0.00 0.00 33.84 2.73
3029 3981 6.769134 TCCGAGAAACATGACTTCATAGTA 57.231 37.500 0.00 0.00 33.84 1.82
3030 3982 5.661056 TCCGAGAAACATGACTTCATAGT 57.339 39.130 0.00 0.00 37.31 2.12
3031 3983 5.400782 CGATCCGAGAAACATGACTTCATAG 59.599 44.000 0.00 0.00 34.26 2.23
3032 3984 5.067283 TCGATCCGAGAAACATGACTTCATA 59.933 40.000 0.00 0.00 34.26 2.15
3033 3985 4.115516 CGATCCGAGAAACATGACTTCAT 58.884 43.478 0.00 0.00 36.96 2.57
3034 3986 3.192633 TCGATCCGAGAAACATGACTTCA 59.807 43.478 0.00 0.00 0.00 3.02
3035 3987 3.548268 GTCGATCCGAGAAACATGACTTC 59.452 47.826 0.00 1.72 36.23 3.01
3036 3988 3.056821 TGTCGATCCGAGAAACATGACTT 60.057 43.478 0.00 0.00 36.23 3.01
3037 3989 2.492088 TGTCGATCCGAGAAACATGACT 59.508 45.455 0.00 0.00 36.23 3.41
3038 3990 2.876091 TGTCGATCCGAGAAACATGAC 58.124 47.619 0.00 0.00 36.23 3.06
3039 3991 3.250744 GTTGTCGATCCGAGAAACATGA 58.749 45.455 0.00 0.00 40.54 3.07
3040 3992 2.348666 GGTTGTCGATCCGAGAAACATG 59.651 50.000 8.99 0.00 44.37 3.21
3041 3993 2.618053 GGTTGTCGATCCGAGAAACAT 58.382 47.619 8.99 0.00 44.37 2.71
3042 3994 1.337447 GGGTTGTCGATCCGAGAAACA 60.337 52.381 14.51 0.00 46.27 2.83
3043 3995 1.067071 AGGGTTGTCGATCCGAGAAAC 60.067 52.381 5.83 5.83 44.27 2.78
3044 3996 1.263356 AGGGTTGTCGATCCGAGAAA 58.737 50.000 0.60 0.00 40.54 2.52
3045 3997 1.067142 CAAGGGTTGTCGATCCGAGAA 60.067 52.381 0.00 0.00 36.83 2.87
3046 3998 0.530744 CAAGGGTTGTCGATCCGAGA 59.469 55.000 0.00 0.00 36.23 4.04
3047 3999 0.530744 TCAAGGGTTGTCGATCCGAG 59.469 55.000 0.00 0.00 36.23 4.63
3048 4000 0.530744 CTCAAGGGTTGTCGATCCGA 59.469 55.000 0.00 0.00 0.00 4.55
3049 4001 0.460284 CCTCAAGGGTTGTCGATCCG 60.460 60.000 0.00 0.00 0.00 4.18
3050 4002 3.460648 CCTCAAGGGTTGTCGATCC 57.539 57.895 0.00 0.00 0.00 3.36
3076 4028 7.923344 TGAAGAAGAAAAACACACAAAAACAGA 59.077 29.630 0.00 0.00 0.00 3.41
3116 4068 8.177980 GAATTTGTTAATTCTCATCAAGGTGC 57.822 34.615 0.00 0.00 44.05 5.01
3146 4098 8.041323 CGTAGAATCAAATAGCATAGGGGTTAT 58.959 37.037 0.00 0.00 0.00 1.89
3194 4146 9.762933 CAATGGATAAAAGGAAAAAGAACAAGA 57.237 29.630 0.00 0.00 0.00 3.02
3204 4156 9.308000 AGTGACATTACAATGGATAAAAGGAAA 57.692 29.630 6.87 0.00 40.70 3.13
3205 4157 8.877864 AGTGACATTACAATGGATAAAAGGAA 57.122 30.769 6.87 0.00 40.70 3.36
3213 4165 8.708378 TCTCATCTAAGTGACATTACAATGGAT 58.292 33.333 6.87 0.00 40.70 3.41
3271 4223 4.567159 CGAAAGGAAGAAGTACAGGTATGC 59.433 45.833 0.00 0.00 0.00 3.14
3278 4230 6.483974 TGCATTTTACGAAAGGAAGAAGTACA 59.516 34.615 0.00 0.00 33.83 2.90
3293 4370 7.306167 GCCTTGAAACATCATATGCATTTTACG 60.306 37.037 3.54 0.00 0.00 3.18
3295 4372 7.554211 TGCCTTGAAACATCATATGCATTTTA 58.446 30.769 3.54 0.00 0.00 1.52
3314 4391 7.944061 TCATTCCATCATAACTTATTGCCTTG 58.056 34.615 0.00 0.00 0.00 3.61
3315 4392 8.537728 TTCATTCCATCATAACTTATTGCCTT 57.462 30.769 0.00 0.00 0.00 4.35
3331 4408 7.535139 CACTTACCGTACAATTTTCATTCCAT 58.465 34.615 0.00 0.00 0.00 3.41
3349 4426 7.601508 ACAGTTGTTATACTTACTGCACTTACC 59.398 37.037 0.00 0.00 41.22 2.85
3350 4427 8.530269 ACAGTTGTTATACTTACTGCACTTAC 57.470 34.615 0.00 0.00 41.22 2.34
3369 4446 6.528826 GCAGCATGAACGATATATACAGTTG 58.471 40.000 0.00 0.00 39.69 3.16
3370 4447 5.346011 CGCAGCATGAACGATATATACAGTT 59.654 40.000 0.00 4.81 39.69 3.16
3373 4450 5.054390 TCGCAGCATGAACGATATATACA 57.946 39.130 0.00 0.00 39.69 2.29
3374 4451 5.974158 AGATCGCAGCATGAACGATATATAC 59.026 40.000 15.11 5.78 40.49 1.47
3375 4452 5.973565 CAGATCGCAGCATGAACGATATATA 59.026 40.000 15.11 0.00 40.49 0.86
3377 4454 4.168760 CAGATCGCAGCATGAACGATATA 58.831 43.478 15.11 0.00 40.49 0.86
3378 4455 2.991866 CAGATCGCAGCATGAACGATAT 59.008 45.455 15.11 10.95 40.49 1.63
3379 4456 2.397549 CAGATCGCAGCATGAACGATA 58.602 47.619 15.11 0.00 40.49 2.92
3382 4459 1.640069 CCAGATCGCAGCATGAACG 59.360 57.895 0.00 0.00 39.69 3.95
3383 4460 1.094073 AGCCAGATCGCAGCATGAAC 61.094 55.000 0.00 0.00 39.69 3.18
3384 4461 0.812811 GAGCCAGATCGCAGCATGAA 60.813 55.000 0.00 0.00 39.69 2.57
3388 4465 1.449070 CTTGAGCCAGATCGCAGCA 60.449 57.895 7.29 0.00 0.00 4.41
3394 4471 2.290093 GTGCATAAGCTTGAGCCAGATC 59.710 50.000 18.49 0.00 43.38 2.75
3419 4499 1.523758 ACGCAATCAGACCTGGAAAC 58.476 50.000 0.00 0.00 0.00 2.78
3424 4504 1.229428 ACACAACGCAATCAGACCTG 58.771 50.000 0.00 0.00 0.00 4.00
3426 4506 3.551551 GTTTACACAACGCAATCAGACC 58.448 45.455 0.00 0.00 0.00 3.85
3429 4509 3.617540 TGGTTTACACAACGCAATCAG 57.382 42.857 0.00 0.00 0.00 2.90
3430 4510 3.628032 TCTTGGTTTACACAACGCAATCA 59.372 39.130 0.00 0.00 0.00 2.57
3435 4515 3.749609 ACCTATCTTGGTTTACACAACGC 59.250 43.478 0.00 0.00 36.89 4.84
3436 4516 7.605410 AATACCTATCTTGGTTTACACAACG 57.395 36.000 0.00 0.00 41.22 4.10
3447 4527 9.550406 TCCGTAAACATAAAATACCTATCTTGG 57.450 33.333 0.00 0.00 0.00 3.61
3449 4529 9.252962 CGTCCGTAAACATAAAATACCTATCTT 57.747 33.333 0.00 0.00 0.00 2.40
3452 4532 6.424812 GCCGTCCGTAAACATAAAATACCTAT 59.575 38.462 0.00 0.00 0.00 2.57
3453 4533 5.752955 GCCGTCCGTAAACATAAAATACCTA 59.247 40.000 0.00 0.00 0.00 3.08
3454 4534 4.571984 GCCGTCCGTAAACATAAAATACCT 59.428 41.667 0.00 0.00 0.00 3.08
3455 4535 4.571984 AGCCGTCCGTAAACATAAAATACC 59.428 41.667 0.00 0.00 0.00 2.73
3464 4546 1.888512 ACTCTAAGCCGTCCGTAAACA 59.111 47.619 0.00 0.00 0.00 2.83
3469 4551 2.273179 TGCACTCTAAGCCGTCCGT 61.273 57.895 0.00 0.00 0.00 4.69
3471 4553 0.320421 TTGTGCACTCTAAGCCGTCC 60.320 55.000 19.41 0.00 0.00 4.79
3472 4554 1.394917 CATTGTGCACTCTAAGCCGTC 59.605 52.381 19.41 0.00 0.00 4.79
3475 4557 3.561725 GGTATCATTGTGCACTCTAAGCC 59.438 47.826 19.41 8.53 0.00 4.35
3480 4562 3.012518 GCTTGGTATCATTGTGCACTCT 58.987 45.455 19.41 1.77 0.00 3.24
3484 4566 3.070476 TCTGCTTGGTATCATTGTGCA 57.930 42.857 0.00 0.00 0.00 4.57
3486 4568 5.771469 TGTTTTCTGCTTGGTATCATTGTG 58.229 37.500 0.00 0.00 0.00 3.33
3495 4577 1.986882 CTCCCTGTTTTCTGCTTGGT 58.013 50.000 0.00 0.00 0.00 3.67
3496 4578 0.600057 GCTCCCTGTTTTCTGCTTGG 59.400 55.000 0.00 0.00 0.00 3.61
3505 4587 1.490490 TGTCAGAAGTGCTCCCTGTTT 59.510 47.619 5.91 0.00 0.00 2.83
3506 4588 1.131638 TGTCAGAAGTGCTCCCTGTT 58.868 50.000 5.91 0.00 0.00 3.16
3507 4589 1.356124 ATGTCAGAAGTGCTCCCTGT 58.644 50.000 5.91 0.00 0.00 4.00
3508 4590 2.027377 AGAATGTCAGAAGTGCTCCCTG 60.027 50.000 0.00 0.00 0.00 4.45
3509 4591 2.264455 AGAATGTCAGAAGTGCTCCCT 58.736 47.619 0.00 0.00 0.00 4.20
3510 4592 2.777832 AGAATGTCAGAAGTGCTCCC 57.222 50.000 0.00 0.00 0.00 4.30
3511 4593 3.434984 GTGAAGAATGTCAGAAGTGCTCC 59.565 47.826 0.00 0.00 0.00 4.70
3513 4595 4.348863 AGTGAAGAATGTCAGAAGTGCT 57.651 40.909 0.00 0.00 0.00 4.40
3514 4596 4.781071 CAAGTGAAGAATGTCAGAAGTGC 58.219 43.478 0.00 0.00 0.00 4.40
3517 4599 5.624344 ATGCAAGTGAAGAATGTCAGAAG 57.376 39.130 0.00 0.00 0.00 2.85
3519 4601 6.317140 GGATAATGCAAGTGAAGAATGTCAGA 59.683 38.462 0.00 0.00 0.00 3.27
3520 4602 6.318144 AGGATAATGCAAGTGAAGAATGTCAG 59.682 38.462 0.00 0.00 0.00 3.51
3522 4604 6.459298 CCAGGATAATGCAAGTGAAGAATGTC 60.459 42.308 0.00 0.00 0.00 3.06
3523 4605 5.359009 CCAGGATAATGCAAGTGAAGAATGT 59.641 40.000 0.00 0.00 0.00 2.71
3524 4606 5.221185 CCCAGGATAATGCAAGTGAAGAATG 60.221 44.000 0.00 0.00 0.00 2.67
3525 4607 4.891756 CCCAGGATAATGCAAGTGAAGAAT 59.108 41.667 0.00 0.00 0.00 2.40
3526 4608 4.272489 CCCAGGATAATGCAAGTGAAGAA 58.728 43.478 0.00 0.00 0.00 2.52
3527 4609 3.371917 CCCCAGGATAATGCAAGTGAAGA 60.372 47.826 0.00 0.00 0.00 2.87
3528 4610 2.954318 CCCCAGGATAATGCAAGTGAAG 59.046 50.000 0.00 0.00 0.00 3.02
3529 4611 2.358090 CCCCCAGGATAATGCAAGTGAA 60.358 50.000 0.00 0.00 33.47 3.18
3530 4612 1.215173 CCCCCAGGATAATGCAAGTGA 59.785 52.381 0.00 0.00 33.47 3.41
3531 4613 1.215173 TCCCCCAGGATAATGCAAGTG 59.785 52.381 0.00 0.00 37.19 3.16
3532 4614 1.607225 TCCCCCAGGATAATGCAAGT 58.393 50.000 0.00 0.00 37.19 3.16
3533 4615 2.310538 GTTCCCCCAGGATAATGCAAG 58.689 52.381 0.00 0.00 43.54 4.01
3534 4616 1.409521 CGTTCCCCCAGGATAATGCAA 60.410 52.381 0.00 0.00 43.54 4.08
3535 4617 0.182537 CGTTCCCCCAGGATAATGCA 59.817 55.000 0.00 0.00 43.54 3.96
3536 4618 0.182775 ACGTTCCCCCAGGATAATGC 59.817 55.000 0.00 0.00 43.54 3.56
3537 4619 2.297701 CAACGTTCCCCCAGGATAATG 58.702 52.381 0.00 0.00 43.54 1.90
3538 4620 1.214424 CCAACGTTCCCCCAGGATAAT 59.786 52.381 0.00 0.00 43.54 1.28
3539 4621 0.621609 CCAACGTTCCCCCAGGATAA 59.378 55.000 0.00 0.00 43.54 1.75
3540 4622 1.276140 CCCAACGTTCCCCCAGGATA 61.276 60.000 0.00 0.00 43.54 2.59
3541 4623 2.612493 CCCAACGTTCCCCCAGGAT 61.612 63.158 0.00 0.00 43.54 3.24
3542 4624 3.253838 CCCAACGTTCCCCCAGGA 61.254 66.667 0.00 0.00 41.88 3.86
3544 4626 3.507377 AAGCCCAACGTTCCCCCAG 62.507 63.158 0.00 0.00 0.00 4.45
3545 4627 3.503839 AAGCCCAACGTTCCCCCA 61.504 61.111 0.00 0.00 0.00 4.96
3546 4628 2.414658 TACAAGCCCAACGTTCCCCC 62.415 60.000 0.00 0.00 0.00 5.40
3552 4634 1.153353 CGACATTACAAGCCCAACGT 58.847 50.000 0.00 0.00 0.00 3.99
3575 4657 2.035237 TTGCCACTTTCCGAGACCGT 62.035 55.000 0.00 0.00 0.00 4.83
3582 4664 0.030638 CCAGTTGTTGCCACTTTCCG 59.969 55.000 0.00 0.00 0.00 4.30
3615 4697 2.172717 GCATACTCCAAGGGGCTTAAGA 59.827 50.000 6.67 0.00 0.00 2.10
3618 4700 0.843984 GGCATACTCCAAGGGGCTTA 59.156 55.000 0.00 0.00 0.00 3.09
3619 4701 0.921256 AGGCATACTCCAAGGGGCTT 60.921 55.000 0.00 0.00 0.00 4.35
3636 4718 0.529337 CAGTGCGTCTATGGCAGAGG 60.529 60.000 9.58 0.59 41.83 3.69
3643 4725 5.674933 TCAGATAGTACAGTGCGTCTATG 57.325 43.478 0.00 0.00 0.00 2.23
3721 4803 2.316677 TCCAATAGTACACTCCCCTGGA 59.683 50.000 0.00 0.00 0.00 3.86
3725 4807 4.563140 TTTGTCCAATAGTACACTCCCC 57.437 45.455 0.00 0.00 0.00 4.81
3734 4816 6.463995 TGCTTTTGAGTTTTGTCCAATAGT 57.536 33.333 0.00 0.00 0.00 2.12
3748 4830 6.652481 TCTCTTGTTTCCTCTATGCTTTTGAG 59.348 38.462 0.00 0.00 0.00 3.02
3749 4831 6.533730 TCTCTTGTTTCCTCTATGCTTTTGA 58.466 36.000 0.00 0.00 0.00 2.69
3750 4832 6.808008 TCTCTTGTTTCCTCTATGCTTTTG 57.192 37.500 0.00 0.00 0.00 2.44
3751 4833 7.170965 TGATCTCTTGTTTCCTCTATGCTTTT 58.829 34.615 0.00 0.00 0.00 2.27
3752 4834 6.715280 TGATCTCTTGTTTCCTCTATGCTTT 58.285 36.000 0.00 0.00 0.00 3.51
3753 4835 6.305272 TGATCTCTTGTTTCCTCTATGCTT 57.695 37.500 0.00 0.00 0.00 3.91
3756 4838 6.648192 ACCTTGATCTCTTGTTTCCTCTATG 58.352 40.000 0.00 0.00 0.00 2.23
3758 4840 5.780282 TGACCTTGATCTCTTGTTTCCTCTA 59.220 40.000 0.00 0.00 0.00 2.43
3760 4842 4.899502 TGACCTTGATCTCTTGTTTCCTC 58.100 43.478 0.00 0.00 0.00 3.71
3762 4844 5.308825 TCTTGACCTTGATCTCTTGTTTCC 58.691 41.667 0.00 0.00 0.00 3.13
3763 4845 6.128063 CCATCTTGACCTTGATCTCTTGTTTC 60.128 42.308 0.00 0.00 0.00 2.78
3767 6069 3.626670 GCCATCTTGACCTTGATCTCTTG 59.373 47.826 0.00 0.00 0.00 3.02
3857 6163 0.251634 CCTGAACCTGAGCTCCTTCC 59.748 60.000 12.15 0.00 0.00 3.46
3867 6173 0.895530 TCGCCTTCTACCTGAACCTG 59.104 55.000 0.00 0.00 0.00 4.00
3868 6174 1.482593 CATCGCCTTCTACCTGAACCT 59.517 52.381 0.00 0.00 0.00 3.50
3869 6175 1.480954 TCATCGCCTTCTACCTGAACC 59.519 52.381 0.00 0.00 0.00 3.62
3870 6176 2.961526 TCATCGCCTTCTACCTGAAC 57.038 50.000 0.00 0.00 0.00 3.18
3871 6177 4.588951 ACATATCATCGCCTTCTACCTGAA 59.411 41.667 0.00 0.00 0.00 3.02
3872 6178 4.021981 CACATATCATCGCCTTCTACCTGA 60.022 45.833 0.00 0.00 0.00 3.86
3873 6179 4.240888 CACATATCATCGCCTTCTACCTG 58.759 47.826 0.00 0.00 0.00 4.00
3874 6180 3.898123 ACACATATCATCGCCTTCTACCT 59.102 43.478 0.00 0.00 0.00 3.08
3875 6181 3.990469 CACACATATCATCGCCTTCTACC 59.010 47.826 0.00 0.00 0.00 3.18
3876 6182 4.871513 TCACACATATCATCGCCTTCTAC 58.128 43.478 0.00 0.00 0.00 2.59
3877 6183 5.163457 TGTTCACACATATCATCGCCTTCTA 60.163 40.000 0.00 0.00 0.00 2.10
3878 6184 4.122776 GTTCACACATATCATCGCCTTCT 58.877 43.478 0.00 0.00 0.00 2.85
3879 6185 3.871006 TGTTCACACATATCATCGCCTTC 59.129 43.478 0.00 0.00 0.00 3.46
3880 6186 3.872696 TGTTCACACATATCATCGCCTT 58.127 40.909 0.00 0.00 0.00 4.35
3881 6187 3.461061 CTGTTCACACATATCATCGCCT 58.539 45.455 0.00 0.00 30.39 5.52
3882 6188 2.545526 CCTGTTCACACATATCATCGCC 59.454 50.000 0.00 0.00 30.39 5.54
3883 6189 3.457234 TCCTGTTCACACATATCATCGC 58.543 45.455 0.00 0.00 30.39 4.58
3884 6190 7.201384 CGAATATCCTGTTCACACATATCATCG 60.201 40.741 0.00 0.00 30.39 3.84
3885 6191 7.814587 TCGAATATCCTGTTCACACATATCATC 59.185 37.037 0.00 0.00 30.39 2.92
3893 6199 5.856126 TGTTTCGAATATCCTGTTCACAC 57.144 39.130 0.00 0.00 0.00 3.82
3900 6206 6.624352 ATTGGTCATGTTTCGAATATCCTG 57.376 37.500 0.00 0.00 0.00 3.86
3912 6222 8.654997 ACTAGATATCAAGCTATTGGTCATGTT 58.345 33.333 5.32 0.00 37.02 2.71
3941 6251 8.532977 TGAACGGTTTATTTGGTTACTAGTAC 57.467 34.615 0.91 0.00 0.00 2.73
3943 6253 7.041167 GGTTGAACGGTTTATTTGGTTACTAGT 60.041 37.037 0.00 0.00 0.00 2.57
3956 6312 3.775261 AAGCCTAGGTTGAACGGTTTA 57.225 42.857 11.31 0.00 0.00 2.01
3978 6334 4.098349 ACATTTCTGTTTGTGCATCACAGT 59.902 37.500 17.57 2.28 45.39 3.55
3979 6335 4.613944 ACATTTCTGTTTGTGCATCACAG 58.386 39.130 13.90 13.90 45.39 3.66
4054 6692 4.601857 ACCCTAGTGGAAGGAAGATTTTGA 59.398 41.667 4.45 0.00 39.15 2.69
4116 6754 3.380954 TGCGCATGTGGTGATGAAAATAT 59.619 39.130 5.66 0.00 0.00 1.28
4125 6763 1.528076 ACCTTTGCGCATGTGGTGA 60.528 52.632 22.73 0.16 0.00 4.02
4193 6832 9.310716 GTGGTTGGATTACAGATACTTACTTAC 57.689 37.037 0.00 0.00 0.00 2.34
4247 6959 3.858247 TCAGATCACTTGCTGACATCAG 58.142 45.455 4.43 4.43 46.40 2.90
4282 7001 4.474394 ACGATTGATCTGAGAGTGGGATA 58.526 43.478 0.00 0.00 0.00 2.59
4342 7061 2.209064 GACTCCGACAGCGCCTTGTA 62.209 60.000 2.29 0.00 35.83 2.41
4369 7088 6.452242 TCAAAAGCGTGTAGAAGTAATCAGA 58.548 36.000 0.00 0.00 0.00 3.27
4387 7106 5.505792 CGTGATCATCGTCACAAATCAAAAG 59.494 40.000 0.00 0.00 46.89 2.27
4401 7120 0.741326 ACCAGGAGACGTGATCATCG 59.259 55.000 13.71 13.71 0.00 3.84


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.