Multiple sequence alignment - TraesCS1D01G404500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G404500 chr1D 100.000 4404 0 0 1 4404 469561071 469556668 0.000000e+00 8133
1 TraesCS1D01G404500 chr1D 82.152 381 33 13 3917 4264 469068613 469068991 1.200000e-75 294
2 TraesCS1D01G404500 chr1D 80.556 252 14 12 3995 4226 469085542 469085778 1.270000e-35 161
3 TraesCS1D01G404500 chr1A 94.846 1397 49 10 888 2263 562742200 562740806 0.000000e+00 2159
4 TraesCS1D01G404500 chr1A 96.518 517 16 2 3042 3556 562739849 562739333 0.000000e+00 854
5 TraesCS1D01G404500 chr1A 95.785 427 17 1 2386 2812 562740808 562740383 0.000000e+00 688
6 TraesCS1D01G404500 chr1A 92.041 490 35 2 3917 4404 562738016 562737529 0.000000e+00 686
7 TraesCS1D01G404500 chr1A 90.572 297 13 5 3644 3925 562739335 562739039 3.210000e-101 379
8 TraesCS1D01G404500 chr1A 90.119 253 11 3 2796 3036 562740211 562739961 2.560000e-82 316
9 TraesCS1D01G404500 chr1A 79.042 501 54 27 3916 4373 562117313 562117805 3.330000e-76 296
10 TraesCS1D01G404500 chr1A 81.437 334 31 13 3929 4233 562064670 562065001 1.220000e-60 244
11 TraesCS1D01G404500 chr1A 95.035 141 5 2 2261 2400 485564156 485564017 2.060000e-53 220
12 TraesCS1D01G404500 chr1A 82.443 262 15 8 3995 4240 562143203 562143449 2.690000e-47 200
13 TraesCS1D01G404500 chr1A 77.807 374 48 17 4035 4384 562722470 562722108 9.660000e-47 198
14 TraesCS1D01G404500 chr1A 84.756 164 15 9 709 864 562742352 562742191 5.900000e-34 156
15 TraesCS1D01G404500 chr1B 90.583 1115 73 14 1169 2260 649331863 649330758 0.000000e+00 1448
16 TraesCS1D01G404500 chr1B 92.193 269 20 1 18 285 649333123 649332855 3.210000e-101 379
17 TraesCS1D01G404500 chr1B 83.289 377 33 16 3917 4264 648676569 648676944 1.980000e-83 320
18 TraesCS1D01G404500 chr1B 78.189 486 56 24 3924 4373 648786414 648786885 9.390000e-67 265
19 TraesCS1D01G404500 chr1B 81.046 306 47 9 2708 3008 649330666 649330367 2.650000e-57 233
20 TraesCS1D01G404500 chr1B 89.583 192 9 5 888 1068 649332526 649332335 2.650000e-57 233
21 TraesCS1D01G404500 chr1B 86.408 206 12 8 3933 4122 649322701 649322496 1.240000e-50 211
22 TraesCS1D01G404500 chr1B 81.923 260 15 9 3995 4238 648795085 648795328 1.620000e-44 191
23 TraesCS1D01G404500 chr1B 90.909 99 8 1 774 871 649332608 649332510 9.940000e-27 132
24 TraesCS1D01G404500 chr3B 85.450 756 49 24 1317 2028 535850915 535851653 0.000000e+00 730
25 TraesCS1D01G404500 chr4B 84.450 746 41 27 1317 2031 273453890 273453189 0.000000e+00 665
26 TraesCS1D01G404500 chr4D 100.000 127 0 0 2261 2387 295432384 295432510 7.360000e-58 235
27 TraesCS1D01G404500 chr7D 98.450 129 2 0 2261 2389 491342413 491342541 1.230000e-55 228
28 TraesCS1D01G404500 chr2D 96.324 136 5 0 2256 2391 536091158 536091023 1.590000e-54 224
29 TraesCS1D01G404500 chr6B 96.296 135 5 0 2260 2394 615921127 615920993 5.730000e-54 222
30 TraesCS1D01G404500 chr5D 94.444 144 7 1 2244 2387 29496036 29496178 2.060000e-53 220
31 TraesCS1D01G404500 chr3D 94.406 143 7 1 2252 2394 536894969 536894828 7.420000e-53 219
32 TraesCS1D01G404500 chr3A 92.763 152 9 2 2241 2390 59515859 59516010 7.420000e-53 219
33 TraesCS1D01G404500 chr3A 95.588 136 6 0 2252 2387 348834437 348834572 7.420000e-53 219


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G404500 chr1D 469556668 469561071 4403 True 8133.000000 8133 100.0000 1 4404 1 chr1D.!!$R1 4403
1 TraesCS1D01G404500 chr1A 562737529 562742352 4823 True 748.285714 2159 92.0910 709 4404 7 chr1A.!!$R3 3695
2 TraesCS1D01G404500 chr1B 649330367 649333123 2756 True 485.000000 1448 88.8628 18 3008 5 chr1B.!!$R2 2990
3 TraesCS1D01G404500 chr3B 535850915 535851653 738 False 730.000000 730 85.4500 1317 2028 1 chr3B.!!$F1 711
4 TraesCS1D01G404500 chr4B 273453189 273453890 701 True 665.000000 665 84.4500 1317 2031 1 chr4B.!!$R1 714

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
832 982 0.106769 TTTCACTCAAGGCCTGCACA 60.107 50.0 5.69 0.00 0.00 4.57 F
1132 1294 0.179018 CCCACCTCCGATTTCATCCC 60.179 60.0 0.00 0.00 0.00 3.85 F
1835 2403 0.389687 GTGCTCTGTCTCTGCAGGAC 60.390 60.0 21.58 21.58 37.39 3.85 F
3167 4091 0.036010 AGGTATGCGCAGTTGCTCTT 60.036 50.0 18.32 0.00 39.32 2.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2373 2981 0.324368 TGCATGTACTCCCTCCGTCT 60.324 55.0 0.0 0.0 0.00 4.18 R
2906 3713 0.249398 ACCGCATCCTCCTACACAAC 59.751 55.0 0.0 0.0 0.00 3.32 R
3370 4295 0.031314 CATCGTCCATCAGGTCCTCG 59.969 60.0 0.0 0.0 35.89 4.63 R
4071 6043 0.967662 TGTGGAAACGATGGGACGTA 59.032 50.0 0.0 0.0 45.83 3.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 2.325166 GCAACGACGCCAACGAAA 59.675 55.556 0.00 0.00 43.93 3.46
84 86 3.394719 ACTCGTGAAAGAAGAAAGGAGC 58.605 45.455 0.00 0.00 0.00 4.70
88 90 4.273480 TCGTGAAAGAAGAAAGGAGCAAAG 59.727 41.667 0.00 0.00 0.00 2.77
111 113 0.454600 TTAGTAAGTGAGCGAGCCGG 59.545 55.000 0.00 0.00 0.00 6.13
138 140 1.228154 GTGAGTTCAAAGCCCGGGT 60.228 57.895 24.63 5.98 0.00 5.28
149 151 1.376812 GCCCGGGTCGACTGATTTT 60.377 57.895 24.63 0.00 0.00 1.82
166 168 9.099454 GACTGATTTTATAAAGGATCGAGTTGT 57.901 33.333 0.00 0.00 0.00 3.32
177 179 3.619038 GGATCGAGTTGTCTTAAAGCTGG 59.381 47.826 0.00 0.00 0.00 4.85
282 284 7.759433 GCAACCAAATGCTACATAGTTACAATT 59.241 33.333 0.00 0.00 43.06 2.32
331 459 8.499967 TCATTTTTGCATGAAACATGAAAGATG 58.500 29.630 14.65 17.47 37.65 2.90
334 462 8.523523 TTTTGCATGAAACATGAAAGATGTAG 57.476 30.769 14.65 0.00 0.00 2.74
349 477 9.450159 TGAAAGATGTAGCGCTACAATTTCACG 62.450 40.741 44.46 4.39 46.49 4.35
350 478 2.679450 TGTAGCGCTACAATTTCACGT 58.321 42.857 40.32 4.91 42.49 4.49
351 479 3.061322 TGTAGCGCTACAATTTCACGTT 58.939 40.909 40.32 4.43 42.49 3.99
352 480 4.236147 TGTAGCGCTACAATTTCACGTTA 58.764 39.130 40.32 18.02 42.49 3.18
353 481 4.865925 TGTAGCGCTACAATTTCACGTTAT 59.134 37.500 40.32 3.31 42.49 1.89
354 482 6.035217 TGTAGCGCTACAATTTCACGTTATA 58.965 36.000 40.32 17.41 42.49 0.98
355 483 6.698329 TGTAGCGCTACAATTTCACGTTATAT 59.302 34.615 40.32 2.58 42.49 0.86
356 484 6.598753 AGCGCTACAATTTCACGTTATATT 57.401 33.333 8.99 0.00 0.00 1.28
357 485 7.703298 AGCGCTACAATTTCACGTTATATTA 57.297 32.000 8.99 0.00 0.00 0.98
358 486 7.561556 AGCGCTACAATTTCACGTTATATTAC 58.438 34.615 8.99 0.00 0.00 1.89
359 487 7.223193 AGCGCTACAATTTCACGTTATATTACA 59.777 33.333 8.99 0.00 0.00 2.41
360 488 7.847078 GCGCTACAATTTCACGTTATATTACAA 59.153 33.333 0.00 0.00 0.00 2.41
361 489 9.353353 CGCTACAATTTCACGTTATATTACAAG 57.647 33.333 0.00 0.00 0.00 3.16
362 490 9.155053 GCTACAATTTCACGTTATATTACAAGC 57.845 33.333 0.00 0.00 0.00 4.01
366 494 9.353353 CAATTTCACGTTATATTACAAGCTACG 57.647 33.333 0.00 0.00 0.00 3.51
367 495 6.500775 TTCACGTTATATTACAAGCTACGC 57.499 37.500 0.09 0.00 0.00 4.42
368 496 4.671964 TCACGTTATATTACAAGCTACGCG 59.328 41.667 3.53 3.53 0.00 6.01
369 497 4.671964 CACGTTATATTACAAGCTACGCGA 59.328 41.667 15.93 0.00 0.00 5.87
370 498 5.341462 CACGTTATATTACAAGCTACGCGAT 59.659 40.000 15.93 0.00 0.00 4.58
371 499 5.566774 ACGTTATATTACAAGCTACGCGATC 59.433 40.000 15.93 0.14 0.00 3.69
372 500 5.003214 CGTTATATTACAAGCTACGCGATCC 59.997 44.000 15.93 0.00 0.00 3.36
373 501 4.785511 ATATTACAAGCTACGCGATCCT 57.214 40.909 15.93 1.60 0.00 3.24
374 502 5.892160 ATATTACAAGCTACGCGATCCTA 57.108 39.130 15.93 0.00 0.00 2.94
375 503 4.579454 ATTACAAGCTACGCGATCCTAA 57.421 40.909 15.93 0.00 0.00 2.69
376 504 2.205307 ACAAGCTACGCGATCCTAAC 57.795 50.000 15.93 0.00 0.00 2.34
377 505 1.121240 CAAGCTACGCGATCCTAACG 58.879 55.000 15.93 0.00 0.00 3.18
378 506 1.019673 AAGCTACGCGATCCTAACGA 58.980 50.000 15.93 0.00 0.00 3.85
379 507 0.587285 AGCTACGCGATCCTAACGAG 59.413 55.000 15.93 0.00 36.71 4.18
380 508 0.307146 GCTACGCGATCCTAACGAGT 59.693 55.000 15.93 0.00 44.52 4.18
381 509 1.528586 GCTACGCGATCCTAACGAGTA 59.471 52.381 15.93 0.00 42.68 2.59
383 511 1.661341 ACGCGATCCTAACGAGTAGT 58.339 50.000 15.93 0.00 41.25 2.73
384 512 2.826428 ACGCGATCCTAACGAGTAGTA 58.174 47.619 15.93 0.00 41.25 1.82
385 513 2.541762 ACGCGATCCTAACGAGTAGTAC 59.458 50.000 15.93 0.00 41.25 2.73
386 514 2.799412 CGCGATCCTAACGAGTAGTACT 59.201 50.000 0.00 1.37 0.00 2.73
387 515 3.121058 CGCGATCCTAACGAGTAGTACTC 60.121 52.174 18.77 18.77 41.71 2.59
388 516 3.186205 GCGATCCTAACGAGTAGTACTCC 59.814 52.174 21.92 6.76 42.12 3.85
389 517 3.428198 CGATCCTAACGAGTAGTACTCCG 59.572 52.174 21.92 18.53 42.12 4.63
390 518 3.895232 TCCTAACGAGTAGTACTCCGT 57.105 47.619 21.92 19.08 42.12 4.69
391 519 5.533482 GATCCTAACGAGTAGTACTCCGTA 58.467 45.833 21.92 13.82 42.12 4.02
392 520 5.339008 TCCTAACGAGTAGTACTCCGTAA 57.661 43.478 21.92 6.86 42.12 3.18
393 521 5.918608 TCCTAACGAGTAGTACTCCGTAAT 58.081 41.667 21.92 12.36 42.12 1.89
394 522 5.755375 TCCTAACGAGTAGTACTCCGTAATG 59.245 44.000 21.92 10.93 42.12 1.90
395 523 3.959573 ACGAGTAGTACTCCGTAATGC 57.040 47.619 21.92 0.00 42.12 3.56
396 524 3.273434 ACGAGTAGTACTCCGTAATGCA 58.727 45.455 21.92 0.00 42.12 3.96
397 525 3.691118 ACGAGTAGTACTCCGTAATGCAA 59.309 43.478 21.92 0.00 42.12 4.08
398 526 4.033684 CGAGTAGTACTCCGTAATGCAAC 58.966 47.826 21.92 0.00 42.12 4.17
399 527 4.201891 CGAGTAGTACTCCGTAATGCAACT 60.202 45.833 21.92 0.00 42.12 3.16
400 528 5.648572 GAGTAGTACTCCGTAATGCAACTT 58.351 41.667 18.10 0.00 39.28 2.66
401 529 5.408356 AGTAGTACTCCGTAATGCAACTTG 58.592 41.667 0.00 0.00 0.00 3.16
402 530 4.267349 AGTACTCCGTAATGCAACTTGT 57.733 40.909 0.00 0.00 0.00 3.16
403 531 4.638304 AGTACTCCGTAATGCAACTTGTT 58.362 39.130 0.00 0.00 0.00 2.83
404 532 3.896648 ACTCCGTAATGCAACTTGTTG 57.103 42.857 8.95 8.95 0.00 3.33
405 533 3.472652 ACTCCGTAATGCAACTTGTTGA 58.527 40.909 16.57 3.48 0.00 3.18
406 534 3.880490 ACTCCGTAATGCAACTTGTTGAA 59.120 39.130 16.57 7.15 0.00 2.69
407 535 4.518970 ACTCCGTAATGCAACTTGTTGAAT 59.481 37.500 16.57 9.23 0.00 2.57
408 536 4.793071 TCCGTAATGCAACTTGTTGAATG 58.207 39.130 16.57 1.30 0.00 2.67
409 537 3.919804 CCGTAATGCAACTTGTTGAATGG 59.080 43.478 16.57 6.35 0.00 3.16
410 538 4.545610 CGTAATGCAACTTGTTGAATGGT 58.454 39.130 16.57 1.50 0.00 3.55
411 539 4.981674 CGTAATGCAACTTGTTGAATGGTT 59.018 37.500 16.57 1.61 0.00 3.67
412 540 5.461737 CGTAATGCAACTTGTTGAATGGTTT 59.538 36.000 16.57 1.29 0.00 3.27
413 541 5.989551 AATGCAACTTGTTGAATGGTTTC 57.010 34.783 16.57 0.00 0.00 2.78
414 542 3.791245 TGCAACTTGTTGAATGGTTTCC 58.209 40.909 16.57 0.00 0.00 3.13
415 543 3.196469 TGCAACTTGTTGAATGGTTTCCA 59.804 39.130 16.57 0.18 38.19 3.53
416 544 3.555547 GCAACTTGTTGAATGGTTTCCAC 59.444 43.478 16.57 0.00 35.80 4.02
417 545 4.753233 CAACTTGTTGAATGGTTTCCACA 58.247 39.130 7.66 0.00 36.14 4.17
418 546 5.174395 CAACTTGTTGAATGGTTTCCACAA 58.826 37.500 7.66 5.57 42.17 3.33
419 547 5.413309 ACTTGTTGAATGGTTTCCACAAA 57.587 34.783 6.76 0.00 43.13 2.83
420 548 5.799213 ACTTGTTGAATGGTTTCCACAAAA 58.201 33.333 6.76 0.00 43.13 2.44
421 549 6.234177 ACTTGTTGAATGGTTTCCACAAAAA 58.766 32.000 6.76 0.00 43.13 1.94
422 550 6.883756 ACTTGTTGAATGGTTTCCACAAAAAT 59.116 30.769 6.76 0.00 43.13 1.82
423 551 8.043710 ACTTGTTGAATGGTTTCCACAAAAATA 58.956 29.630 6.76 0.00 43.13 1.40
424 552 7.778470 TGTTGAATGGTTTCCACAAAAATAC 57.222 32.000 0.00 0.00 35.30 1.89
425 553 7.560368 TGTTGAATGGTTTCCACAAAAATACT 58.440 30.769 0.00 0.00 35.30 2.12
426 554 8.043710 TGTTGAATGGTTTCCACAAAAATACTT 58.956 29.630 0.00 0.00 35.30 2.24
427 555 8.334632 GTTGAATGGTTTCCACAAAAATACTTG 58.665 33.333 0.00 0.00 35.80 3.16
428 556 7.560368 TGAATGGTTTCCACAAAAATACTTGT 58.440 30.769 0.00 0.00 40.17 3.16
429 557 8.696374 TGAATGGTTTCCACAAAAATACTTGTA 58.304 29.630 0.00 0.00 37.43 2.41
430 558 9.535878 GAATGGTTTCCACAAAAATACTTGTAA 57.464 29.630 0.00 0.00 37.43 2.41
431 559 9.892130 AATGGTTTCCACAAAAATACTTGTAAA 57.108 25.926 0.00 0.00 37.43 2.01
432 560 9.892130 ATGGTTTCCACAAAAATACTTGTAAAA 57.108 25.926 0.00 0.00 37.43 1.52
433 561 9.152595 TGGTTTCCACAAAAATACTTGTAAAAC 57.847 29.630 13.14 13.14 39.91 2.43
434 562 9.373603 GGTTTCCACAAAAATACTTGTAAAACT 57.626 29.630 17.21 0.00 40.16 2.66
436 564 8.844441 TTCCACAAAAATACTTGTAAAACTCG 57.156 30.769 0.00 0.00 37.43 4.18
437 565 8.211116 TCCACAAAAATACTTGTAAAACTCGA 57.789 30.769 0.00 0.00 37.43 4.04
438 566 8.124199 TCCACAAAAATACTTGTAAAACTCGAC 58.876 33.333 0.00 0.00 37.43 4.20
439 567 7.377662 CCACAAAAATACTTGTAAAACTCGACC 59.622 37.037 0.00 0.00 37.43 4.79
440 568 7.911205 CACAAAAATACTTGTAAAACTCGACCA 59.089 33.333 0.00 0.00 37.43 4.02
441 569 8.126700 ACAAAAATACTTGTAAAACTCGACCAG 58.873 33.333 0.00 0.00 37.76 4.00
442 570 6.796705 AAATACTTGTAAAACTCGACCAGG 57.203 37.500 0.00 0.00 0.00 4.45
443 571 2.490991 ACTTGTAAAACTCGACCAGGC 58.509 47.619 0.00 0.00 0.00 4.85
444 572 2.104281 ACTTGTAAAACTCGACCAGGCT 59.896 45.455 0.00 0.00 0.00 4.58
445 573 2.922740 TGTAAAACTCGACCAGGCTT 57.077 45.000 0.00 0.00 0.00 4.35
446 574 4.202284 ACTTGTAAAACTCGACCAGGCTTA 60.202 41.667 0.00 0.00 0.00 3.09
447 575 4.546829 TGTAAAACTCGACCAGGCTTAT 57.453 40.909 0.00 0.00 0.00 1.73
448 576 4.501071 TGTAAAACTCGACCAGGCTTATC 58.499 43.478 0.00 0.00 0.00 1.75
449 577 3.695830 AAAACTCGACCAGGCTTATCA 57.304 42.857 0.00 0.00 0.00 2.15
450 578 2.969628 AACTCGACCAGGCTTATCAG 57.030 50.000 0.00 0.00 0.00 2.90
451 579 1.853963 ACTCGACCAGGCTTATCAGT 58.146 50.000 0.00 0.00 0.00 3.41
452 580 1.478510 ACTCGACCAGGCTTATCAGTG 59.521 52.381 0.00 0.00 0.00 3.66
453 581 1.478510 CTCGACCAGGCTTATCAGTGT 59.521 52.381 0.00 0.00 0.00 3.55
454 582 2.688446 CTCGACCAGGCTTATCAGTGTA 59.312 50.000 0.00 0.00 0.00 2.90
455 583 3.296854 TCGACCAGGCTTATCAGTGTAT 58.703 45.455 0.00 0.00 0.00 2.29
456 584 3.068165 TCGACCAGGCTTATCAGTGTATG 59.932 47.826 0.00 0.00 0.00 2.39
457 585 3.733337 GACCAGGCTTATCAGTGTATGG 58.267 50.000 0.00 0.00 0.00 2.74
458 586 2.439507 ACCAGGCTTATCAGTGTATGGG 59.560 50.000 0.00 0.00 0.00 4.00
459 587 2.439507 CCAGGCTTATCAGTGTATGGGT 59.560 50.000 0.00 0.00 0.00 4.51
460 588 3.646162 CCAGGCTTATCAGTGTATGGGTA 59.354 47.826 0.00 0.00 0.00 3.69
461 589 4.503296 CCAGGCTTATCAGTGTATGGGTAC 60.503 50.000 0.00 0.00 0.00 3.34
462 590 4.345257 CAGGCTTATCAGTGTATGGGTACT 59.655 45.833 0.00 0.00 0.00 2.73
463 591 5.538813 CAGGCTTATCAGTGTATGGGTACTA 59.461 44.000 0.00 0.00 0.00 1.82
464 592 5.539193 AGGCTTATCAGTGTATGGGTACTAC 59.461 44.000 0.00 0.00 0.00 2.73
465 593 5.279356 GGCTTATCAGTGTATGGGTACTACC 60.279 48.000 0.00 0.00 37.60 3.18
466 594 5.303589 GCTTATCAGTGTATGGGTACTACCA 59.696 44.000 7.57 0.00 46.24 3.25
467 595 6.183360 GCTTATCAGTGTATGGGTACTACCAA 60.183 42.308 7.57 0.00 45.13 3.67
468 596 5.871396 ATCAGTGTATGGGTACTACCAAG 57.129 43.478 7.57 0.00 45.13 3.61
469 597 4.680407 TCAGTGTATGGGTACTACCAAGT 58.320 43.478 7.57 0.00 45.13 3.16
470 598 5.088730 TCAGTGTATGGGTACTACCAAGTT 58.911 41.667 7.57 0.00 45.13 2.66
471 599 5.544948 TCAGTGTATGGGTACTACCAAGTTT 59.455 40.000 7.57 0.00 45.13 2.66
472 600 6.043474 TCAGTGTATGGGTACTACCAAGTTTT 59.957 38.462 7.57 0.00 45.13 2.43
473 601 6.713450 CAGTGTATGGGTACTACCAAGTTTTT 59.287 38.462 7.57 0.00 45.13 1.94
495 623 7.448588 TTTTCGATGTCAATCTGTGTTTTTG 57.551 32.000 0.00 0.00 0.00 2.44
496 624 6.370433 TTCGATGTCAATCTGTGTTTTTGA 57.630 33.333 0.00 0.00 0.00 2.69
497 625 5.989249 TCGATGTCAATCTGTGTTTTTGAG 58.011 37.500 0.00 0.00 30.50 3.02
498 626 5.527214 TCGATGTCAATCTGTGTTTTTGAGT 59.473 36.000 0.00 0.00 30.50 3.41
499 627 6.704050 TCGATGTCAATCTGTGTTTTTGAGTA 59.296 34.615 0.00 0.00 30.50 2.59
500 628 7.225734 TCGATGTCAATCTGTGTTTTTGAGTAA 59.774 33.333 0.00 0.00 30.50 2.24
501 629 8.017373 CGATGTCAATCTGTGTTTTTGAGTAAT 58.983 33.333 0.00 0.00 30.50 1.89
502 630 9.683069 GATGTCAATCTGTGTTTTTGAGTAATT 57.317 29.630 0.00 0.00 30.50 1.40
504 632 9.868277 TGTCAATCTGTGTTTTTGAGTAATTTT 57.132 25.926 0.00 0.00 30.50 1.82
518 646 9.757227 TTTGAGTAATTTTTAAACTCATGGGTG 57.243 29.630 0.00 0.00 46.53 4.61
519 647 8.472007 TGAGTAATTTTTAAACTCATGGGTGT 57.528 30.769 0.00 0.00 43.45 4.16
520 648 8.573035 TGAGTAATTTTTAAACTCATGGGTGTC 58.427 33.333 0.00 0.00 43.45 3.67
521 649 8.706322 AGTAATTTTTAAACTCATGGGTGTCT 57.294 30.769 0.00 0.00 0.00 3.41
522 650 8.576442 AGTAATTTTTAAACTCATGGGTGTCTG 58.424 33.333 0.00 0.00 0.00 3.51
523 651 7.595819 AATTTTTAAACTCATGGGTGTCTGA 57.404 32.000 0.00 0.00 0.00 3.27
524 652 6.633500 TTTTTAAACTCATGGGTGTCTGAG 57.367 37.500 0.00 0.00 43.62 3.35
528 656 2.847327 CTCATGGGTGTCTGAGTTGT 57.153 50.000 0.00 0.00 35.28 3.32
529 657 3.131709 CTCATGGGTGTCTGAGTTGTT 57.868 47.619 0.00 0.00 35.28 2.83
530 658 3.480470 CTCATGGGTGTCTGAGTTGTTT 58.520 45.455 0.00 0.00 35.28 2.83
531 659 3.885297 CTCATGGGTGTCTGAGTTGTTTT 59.115 43.478 0.00 0.00 35.28 2.43
532 660 4.277476 TCATGGGTGTCTGAGTTGTTTTT 58.723 39.130 0.00 0.00 0.00 1.94
533 661 4.338118 TCATGGGTGTCTGAGTTGTTTTTC 59.662 41.667 0.00 0.00 0.00 2.29
534 662 3.020984 TGGGTGTCTGAGTTGTTTTTCC 58.979 45.455 0.00 0.00 0.00 3.13
535 663 3.020984 GGGTGTCTGAGTTGTTTTTCCA 58.979 45.455 0.00 0.00 0.00 3.53
536 664 3.445805 GGGTGTCTGAGTTGTTTTTCCAA 59.554 43.478 0.00 0.00 0.00 3.53
537 665 4.421058 GGTGTCTGAGTTGTTTTTCCAAC 58.579 43.478 0.00 0.00 44.00 3.77
538 666 4.421058 GTGTCTGAGTTGTTTTTCCAACC 58.579 43.478 0.00 0.00 44.60 3.77
539 667 3.445805 TGTCTGAGTTGTTTTTCCAACCC 59.554 43.478 0.00 0.00 44.60 4.11
540 668 3.445805 GTCTGAGTTGTTTTTCCAACCCA 59.554 43.478 0.00 0.00 44.60 4.51
541 669 4.081917 GTCTGAGTTGTTTTTCCAACCCAA 60.082 41.667 0.00 0.00 44.60 4.12
542 670 4.081917 TCTGAGTTGTTTTTCCAACCCAAC 60.082 41.667 0.00 0.00 44.60 3.77
543 671 3.835395 TGAGTTGTTTTTCCAACCCAACT 59.165 39.130 3.23 3.23 46.04 3.16
544 672 4.465632 AGTTGTTTTTCCAACCCAACTC 57.534 40.909 0.00 0.00 44.60 3.01
545 673 3.196901 AGTTGTTTTTCCAACCCAACTCC 59.803 43.478 0.00 0.00 44.60 3.85
546 674 3.108847 TGTTTTTCCAACCCAACTCCT 57.891 42.857 0.00 0.00 0.00 3.69
547 675 3.028130 TGTTTTTCCAACCCAACTCCTC 58.972 45.455 0.00 0.00 0.00 3.71
548 676 2.364324 GTTTTTCCAACCCAACTCCTCC 59.636 50.000 0.00 0.00 0.00 4.30
549 677 0.109723 TTTCCAACCCAACTCCTCCG 59.890 55.000 0.00 0.00 0.00 4.63
550 678 1.774894 TTCCAACCCAACTCCTCCGG 61.775 60.000 0.00 0.00 0.00 5.14
551 679 2.526046 CCAACCCAACTCCTCCGGT 61.526 63.158 0.00 0.00 0.00 5.28
552 680 1.302511 CAACCCAACTCCTCCGGTG 60.303 63.158 0.00 0.00 0.00 4.94
553 681 1.768888 AACCCAACTCCTCCGGTGT 60.769 57.895 0.00 0.00 0.00 4.16
554 682 1.350310 AACCCAACTCCTCCGGTGTT 61.350 55.000 0.00 0.00 39.56 3.32
556 684 3.655481 CAACTCCTCCGGTGTTGC 58.345 61.111 12.97 0.00 45.62 4.17
557 685 1.071471 CAACTCCTCCGGTGTTGCT 59.929 57.895 12.97 0.00 45.62 3.91
558 686 0.535102 CAACTCCTCCGGTGTTGCTT 60.535 55.000 12.97 0.00 45.62 3.91
559 687 0.535102 AACTCCTCCGGTGTTGCTTG 60.535 55.000 0.00 0.00 37.89 4.01
560 688 2.281484 TCCTCCGGTGTTGCTTGC 60.281 61.111 0.00 0.00 0.00 4.01
561 689 3.365265 CCTCCGGTGTTGCTTGCC 61.365 66.667 0.00 0.00 0.00 4.52
562 690 2.281761 CTCCGGTGTTGCTTGCCT 60.282 61.111 0.00 0.00 0.00 4.75
563 691 2.594303 TCCGGTGTTGCTTGCCTG 60.594 61.111 0.00 0.00 0.00 4.85
564 692 2.906897 CCGGTGTTGCTTGCCTGT 60.907 61.111 0.00 0.00 0.00 4.00
565 693 2.332514 CGGTGTTGCTTGCCTGTG 59.667 61.111 0.00 0.00 0.00 3.66
566 694 2.028043 GGTGTTGCTTGCCTGTGC 59.972 61.111 0.00 0.00 38.26 4.57
567 695 2.028043 GTGTTGCTTGCCTGTGCC 59.972 61.111 0.00 0.00 36.33 5.01
568 696 3.594775 TGTTGCTTGCCTGTGCCG 61.595 61.111 0.00 0.00 36.33 5.69
569 697 3.286751 GTTGCTTGCCTGTGCCGA 61.287 61.111 0.00 0.00 36.33 5.54
570 698 3.286751 TTGCTTGCCTGTGCCGAC 61.287 61.111 0.00 0.00 36.33 4.79
571 699 3.772853 TTGCTTGCCTGTGCCGACT 62.773 57.895 0.00 0.00 36.33 4.18
572 700 2.047274 GCTTGCCTGTGCCGACTA 60.047 61.111 0.00 0.00 36.33 2.59
573 701 2.103042 GCTTGCCTGTGCCGACTAG 61.103 63.158 0.00 0.00 36.33 2.57
574 702 2.047274 TTGCCTGTGCCGACTAGC 60.047 61.111 0.00 0.00 36.33 3.42
575 703 2.786539 CTTGCCTGTGCCGACTAGCA 62.787 60.000 0.00 0.00 41.46 3.49
576 704 2.047274 GCCTGTGCCGACTAGCAA 60.047 61.111 0.00 0.00 46.19 3.91
577 705 2.391389 GCCTGTGCCGACTAGCAAC 61.391 63.158 0.00 0.00 46.19 4.17
578 706 1.005037 CCTGTGCCGACTAGCAACA 60.005 57.895 0.00 0.00 46.19 3.33
579 707 0.602638 CCTGTGCCGACTAGCAACAA 60.603 55.000 0.00 0.00 46.19 2.83
580 708 0.792640 CTGTGCCGACTAGCAACAAG 59.207 55.000 0.00 0.00 46.19 3.16
581 709 0.602638 TGTGCCGACTAGCAACAAGG 60.603 55.000 0.00 0.00 46.19 3.61
582 710 0.320421 GTGCCGACTAGCAACAAGGA 60.320 55.000 0.00 0.00 46.19 3.36
583 711 0.394938 TGCCGACTAGCAACAAGGAA 59.605 50.000 0.00 0.00 40.56 3.36
584 712 1.003118 TGCCGACTAGCAACAAGGAAT 59.997 47.619 0.00 0.00 40.56 3.01
585 713 1.666189 GCCGACTAGCAACAAGGAATC 59.334 52.381 0.00 0.00 0.00 2.52
586 714 2.935238 GCCGACTAGCAACAAGGAATCA 60.935 50.000 0.00 0.00 0.00 2.57
587 715 3.334691 CCGACTAGCAACAAGGAATCAA 58.665 45.455 0.00 0.00 0.00 2.57
588 716 3.751175 CCGACTAGCAACAAGGAATCAAA 59.249 43.478 0.00 0.00 0.00 2.69
589 717 4.396166 CCGACTAGCAACAAGGAATCAAAT 59.604 41.667 0.00 0.00 0.00 2.32
590 718 5.327091 CGACTAGCAACAAGGAATCAAATG 58.673 41.667 0.00 0.00 0.00 2.32
591 719 5.644644 GACTAGCAACAAGGAATCAAATGG 58.355 41.667 0.00 0.00 0.00 3.16
592 720 5.324409 ACTAGCAACAAGGAATCAAATGGA 58.676 37.500 0.00 0.00 0.00 3.41
593 721 4.796038 AGCAACAAGGAATCAAATGGAG 57.204 40.909 0.00 0.00 0.00 3.86
594 722 4.154942 AGCAACAAGGAATCAAATGGAGT 58.845 39.130 0.00 0.00 0.00 3.85
595 723 4.590222 AGCAACAAGGAATCAAATGGAGTT 59.410 37.500 0.00 0.00 0.00 3.01
596 724 5.774690 AGCAACAAGGAATCAAATGGAGTTA 59.225 36.000 0.00 0.00 0.00 2.24
597 725 5.863935 GCAACAAGGAATCAAATGGAGTTAC 59.136 40.000 0.00 0.00 0.00 2.50
598 726 6.516527 GCAACAAGGAATCAAATGGAGTTACA 60.517 38.462 0.00 0.00 0.00 2.41
599 727 7.432869 CAACAAGGAATCAAATGGAGTTACAA 58.567 34.615 0.00 0.00 0.00 2.41
600 728 7.219484 ACAAGGAATCAAATGGAGTTACAAG 57.781 36.000 0.00 0.00 0.00 3.16
601 729 7.004086 ACAAGGAATCAAATGGAGTTACAAGA 58.996 34.615 0.00 0.00 0.00 3.02
602 730 7.671398 ACAAGGAATCAAATGGAGTTACAAGAT 59.329 33.333 0.00 0.00 0.00 2.40
603 731 9.177608 CAAGGAATCAAATGGAGTTACAAGATA 57.822 33.333 0.00 0.00 0.00 1.98
604 732 9.753674 AAGGAATCAAATGGAGTTACAAGATAA 57.246 29.630 0.00 0.00 0.00 1.75
605 733 9.927081 AGGAATCAAATGGAGTTACAAGATAAT 57.073 29.630 0.00 0.00 0.00 1.28
634 762 9.844790 TTACAAAATGCTTGATTGAGTGATTAG 57.155 29.630 5.67 0.00 0.00 1.73
635 763 7.318141 ACAAAATGCTTGATTGAGTGATTAGG 58.682 34.615 5.67 0.00 0.00 2.69
636 764 7.039504 ACAAAATGCTTGATTGAGTGATTAGGT 60.040 33.333 5.67 0.00 0.00 3.08
637 765 6.690194 AATGCTTGATTGAGTGATTAGGTC 57.310 37.500 0.00 0.00 0.00 3.85
638 766 5.164620 TGCTTGATTGAGTGATTAGGTCA 57.835 39.130 0.00 0.00 0.00 4.02
639 767 5.559770 TGCTTGATTGAGTGATTAGGTCAA 58.440 37.500 0.00 0.00 38.90 3.18
640 768 6.003326 TGCTTGATTGAGTGATTAGGTCAAA 58.997 36.000 0.00 0.00 38.90 2.69
641 769 6.489700 TGCTTGATTGAGTGATTAGGTCAAAA 59.510 34.615 0.00 0.00 38.90 2.44
642 770 7.177216 TGCTTGATTGAGTGATTAGGTCAAAAT 59.823 33.333 0.00 0.00 38.90 1.82
643 771 8.031277 GCTTGATTGAGTGATTAGGTCAAAATT 58.969 33.333 0.00 0.00 38.90 1.82
644 772 9.918630 CTTGATTGAGTGATTAGGTCAAAATTT 57.081 29.630 0.00 0.00 38.90 1.82
646 774 9.912634 TGATTGAGTGATTAGGTCAAAATTTTC 57.087 29.630 0.00 0.00 38.90 2.29
647 775 9.912634 GATTGAGTGATTAGGTCAAAATTTTCA 57.087 29.630 0.00 0.00 38.90 2.69
650 778 9.912634 TGAGTGATTAGGTCAAAATTTTCAATC 57.087 29.630 0.00 3.41 38.90 2.67
651 779 8.970691 AGTGATTAGGTCAAAATTTTCAATCG 57.029 30.769 0.00 0.00 38.90 3.34
652 780 8.028938 AGTGATTAGGTCAAAATTTTCAATCGG 58.971 33.333 0.00 0.00 38.90 4.18
653 781 6.811170 TGATTAGGTCAAAATTTTCAATCGGC 59.189 34.615 0.00 0.00 32.78 5.54
654 782 4.871933 AGGTCAAAATTTTCAATCGGCT 57.128 36.364 0.00 0.00 0.00 5.52
655 783 4.559153 AGGTCAAAATTTTCAATCGGCTG 58.441 39.130 0.00 0.00 0.00 4.85
656 784 4.280677 AGGTCAAAATTTTCAATCGGCTGA 59.719 37.500 0.00 0.00 0.00 4.26
657 785 4.622740 GGTCAAAATTTTCAATCGGCTGAG 59.377 41.667 0.00 0.00 0.00 3.35
658 786 5.460646 GTCAAAATTTTCAATCGGCTGAGA 58.539 37.500 0.00 0.00 0.00 3.27
659 787 5.920273 GTCAAAATTTTCAATCGGCTGAGAA 59.080 36.000 0.00 0.00 0.00 2.87
660 788 6.088616 GTCAAAATTTTCAATCGGCTGAGAAG 59.911 38.462 0.00 0.00 0.00 2.85
661 789 5.964958 AAATTTTCAATCGGCTGAGAAGA 57.035 34.783 0.00 0.00 0.00 2.87
662 790 5.964958 AATTTTCAATCGGCTGAGAAGAA 57.035 34.783 0.00 2.21 0.00 2.52
663 791 6.521151 AATTTTCAATCGGCTGAGAAGAAT 57.479 33.333 0.00 1.41 0.00 2.40
664 792 7.630242 AATTTTCAATCGGCTGAGAAGAATA 57.370 32.000 0.00 1.19 0.00 1.75
665 793 7.814264 ATTTTCAATCGGCTGAGAAGAATAT 57.186 32.000 0.00 3.42 0.00 1.28
666 794 8.908786 ATTTTCAATCGGCTGAGAAGAATATA 57.091 30.769 0.00 0.00 0.00 0.86
667 795 8.908786 TTTTCAATCGGCTGAGAAGAATATAT 57.091 30.769 0.00 0.00 0.00 0.86
668 796 8.908786 TTTCAATCGGCTGAGAAGAATATATT 57.091 30.769 0.00 0.00 0.00 1.28
669 797 8.908786 TTCAATCGGCTGAGAAGAATATATTT 57.091 30.769 0.00 0.00 0.00 1.40
670 798 8.908786 TCAATCGGCTGAGAAGAATATATTTT 57.091 30.769 0.00 0.00 0.00 1.82
671 799 9.342308 TCAATCGGCTGAGAAGAATATATTTTT 57.658 29.630 0.00 0.00 0.00 1.94
672 800 9.604626 CAATCGGCTGAGAAGAATATATTTTTC 57.395 33.333 17.07 17.07 32.75 2.29
673 801 8.908786 ATCGGCTGAGAAGAATATATTTTTCA 57.091 30.769 23.43 13.26 34.42 2.69
674 802 8.370493 TCGGCTGAGAAGAATATATTTTTCAG 57.630 34.615 23.43 19.76 34.42 3.02
675 803 8.204160 TCGGCTGAGAAGAATATATTTTTCAGA 58.796 33.333 23.43 12.54 34.42 3.27
676 804 8.494347 CGGCTGAGAAGAATATATTTTTCAGAG 58.506 37.037 23.43 19.19 34.42 3.35
677 805 8.288913 GGCTGAGAAGAATATATTTTTCAGAGC 58.711 37.037 25.40 25.40 37.05 4.09
678 806 8.834465 GCTGAGAAGAATATATTTTTCAGAGCA 58.166 33.333 26.78 18.94 37.35 4.26
681 809 9.609950 GAGAAGAATATATTTTTCAGAGCATGC 57.390 33.333 23.43 10.51 34.42 4.06
682 810 8.574737 AGAAGAATATATTTTTCAGAGCATGCC 58.425 33.333 23.43 6.03 34.42 4.40
683 811 7.828508 AGAATATATTTTTCAGAGCATGCCA 57.171 32.000 15.66 0.00 0.00 4.92
684 812 8.241497 AGAATATATTTTTCAGAGCATGCCAA 57.759 30.769 15.66 0.00 0.00 4.52
685 813 8.867097 AGAATATATTTTTCAGAGCATGCCAAT 58.133 29.630 15.66 0.00 0.00 3.16
690 818 9.841295 ATATTTTTCAGAGCATGCCAATAATTT 57.159 25.926 15.66 0.00 0.00 1.82
691 819 7.599630 TTTTTCAGAGCATGCCAATAATTTC 57.400 32.000 15.66 2.28 0.00 2.17
692 820 6.534475 TTTCAGAGCATGCCAATAATTTCT 57.466 33.333 15.66 4.93 0.00 2.52
693 821 6.534475 TTCAGAGCATGCCAATAATTTCTT 57.466 33.333 15.66 0.00 0.00 2.52
694 822 6.534475 TCAGAGCATGCCAATAATTTCTTT 57.466 33.333 15.66 0.00 0.00 2.52
695 823 6.938507 TCAGAGCATGCCAATAATTTCTTTT 58.061 32.000 15.66 0.00 0.00 2.27
696 824 7.388437 TCAGAGCATGCCAATAATTTCTTTTT 58.612 30.769 15.66 0.00 0.00 1.94
766 899 2.982339 TTGGGCTGGCCTAGTTTTAA 57.018 45.000 21.72 2.21 36.10 1.52
767 900 2.982339 TGGGCTGGCCTAGTTTTAAA 57.018 45.000 21.72 0.00 36.10 1.52
817 967 7.122055 AGTGGCCTCATACGAAAAATATTTTCA 59.878 33.333 13.68 0.93 0.00 2.69
829 979 4.725790 AATATTTTCACTCAAGGCCTGC 57.274 40.909 5.69 0.00 0.00 4.85
832 982 0.106769 TTTCACTCAAGGCCTGCACA 60.107 50.000 5.69 0.00 0.00 4.57
854 1005 2.351244 CGGACTACTCTGCAGCCCA 61.351 63.158 9.47 0.00 0.00 5.36
855 1006 1.219393 GGACTACTCTGCAGCCCAC 59.781 63.158 9.47 0.00 0.00 4.61
856 1007 1.261238 GGACTACTCTGCAGCCCACT 61.261 60.000 9.47 0.00 0.00 4.00
857 1008 0.610687 GACTACTCTGCAGCCCACTT 59.389 55.000 9.47 0.00 0.00 3.16
858 1009 1.825474 GACTACTCTGCAGCCCACTTA 59.175 52.381 9.47 0.00 0.00 2.24
859 1010 1.827969 ACTACTCTGCAGCCCACTTAG 59.172 52.381 9.47 1.34 0.00 2.18
860 1011 2.103373 CTACTCTGCAGCCCACTTAGA 58.897 52.381 9.47 0.00 0.00 2.10
861 1012 1.352083 ACTCTGCAGCCCACTTAGAA 58.648 50.000 9.47 0.00 0.00 2.10
862 1013 1.699634 ACTCTGCAGCCCACTTAGAAA 59.300 47.619 9.47 0.00 0.00 2.52
863 1014 2.307098 ACTCTGCAGCCCACTTAGAAAT 59.693 45.455 9.47 0.00 0.00 2.17
864 1015 3.519510 ACTCTGCAGCCCACTTAGAAATA 59.480 43.478 9.47 0.00 0.00 1.40
865 1016 4.125703 CTCTGCAGCCCACTTAGAAATAG 58.874 47.826 9.47 0.00 0.00 1.73
866 1017 3.519510 TCTGCAGCCCACTTAGAAATAGT 59.480 43.478 9.47 0.00 0.00 2.12
867 1018 4.714802 TCTGCAGCCCACTTAGAAATAGTA 59.285 41.667 9.47 0.00 0.00 1.82
868 1019 4.766375 TGCAGCCCACTTAGAAATAGTAC 58.234 43.478 0.00 0.00 0.00 2.73
869 1020 4.469945 TGCAGCCCACTTAGAAATAGTACT 59.530 41.667 0.00 0.00 0.00 2.73
870 1021 4.811557 GCAGCCCACTTAGAAATAGTACTG 59.188 45.833 5.39 0.00 0.00 2.74
871 1022 5.627040 GCAGCCCACTTAGAAATAGTACTGT 60.627 44.000 5.39 0.00 0.00 3.55
872 1023 6.407202 CAGCCCACTTAGAAATAGTACTGTT 58.593 40.000 5.39 1.49 0.00 3.16
873 1024 6.313905 CAGCCCACTTAGAAATAGTACTGTTG 59.686 42.308 5.39 0.00 0.00 3.33
874 1025 5.064834 GCCCACTTAGAAATAGTACTGTTGC 59.935 44.000 5.39 3.58 0.00 4.17
875 1026 6.170506 CCCACTTAGAAATAGTACTGTTGCA 58.829 40.000 12.47 0.00 0.00 4.08
876 1027 6.653320 CCCACTTAGAAATAGTACTGTTGCAA 59.347 38.462 12.47 0.00 0.00 4.08
877 1028 7.174253 CCCACTTAGAAATAGTACTGTTGCAAA 59.826 37.037 12.47 3.93 0.00 3.68
878 1029 8.564574 CCACTTAGAAATAGTACTGTTGCAAAA 58.435 33.333 12.47 0.00 0.00 2.44
879 1030 9.944663 CACTTAGAAATAGTACTGTTGCAAAAA 57.055 29.630 12.47 3.62 0.00 1.94
913 1071 3.635836 AGAAATAGTACTGGGCCTCGTAC 59.364 47.826 21.42 21.42 36.98 3.67
916 1074 1.138247 GTACTGGGCCTCGTACACG 59.862 63.158 22.99 0.00 36.78 4.49
934 1094 1.599606 CGTGCTAGTCCACAGCTCCT 61.600 60.000 2.09 0.00 39.83 3.69
957 1119 1.279271 AGTCCAGTTTCCCTCCATTCG 59.721 52.381 0.00 0.00 0.00 3.34
1132 1294 0.179018 CCCACCTCCGATTTCATCCC 60.179 60.000 0.00 0.00 0.00 3.85
1515 2066 0.469144 TCTGTTGGTTTGGGAAGGCC 60.469 55.000 0.00 0.00 0.00 5.19
1740 2307 0.584396 TGCGCACGGAAGTTGTTTAG 59.416 50.000 5.66 0.00 46.40 1.85
1807 2375 4.037923 TGATTTCAAAGTGCCTGACCTTTC 59.962 41.667 0.00 0.00 0.00 2.62
1835 2403 0.389687 GTGCTCTGTCTCTGCAGGAC 60.390 60.000 21.58 21.58 37.39 3.85
2048 2650 3.011818 TGTGAACATGCTTGAGCCATAG 58.988 45.455 6.60 0.00 41.18 2.23
2113 2718 3.057806 CGTGTTCCCACCAGATAAAAACC 60.058 47.826 0.00 0.00 38.41 3.27
2245 2853 5.241506 GTCTCATTGAAACCACCAGATTTGA 59.758 40.000 0.00 0.00 0.00 2.69
2275 2883 1.732117 TTTTTACTCCCTCCGTCCCA 58.268 50.000 0.00 0.00 0.00 4.37
2276 2884 1.732117 TTTTACTCCCTCCGTCCCAA 58.268 50.000 0.00 0.00 0.00 4.12
2277 2885 1.732117 TTTACTCCCTCCGTCCCAAA 58.268 50.000 0.00 0.00 0.00 3.28
2278 2886 1.732117 TTACTCCCTCCGTCCCAAAA 58.268 50.000 0.00 0.00 0.00 2.44
2279 2887 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
2280 2888 1.073098 ACTCCCTCCGTCCCAAAATT 58.927 50.000 0.00 0.00 0.00 1.82
2281 2889 1.004394 ACTCCCTCCGTCCCAAAATTC 59.996 52.381 0.00 0.00 0.00 2.17
2282 2890 1.282157 CTCCCTCCGTCCCAAAATTCT 59.718 52.381 0.00 0.00 0.00 2.40
2283 2891 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
2284 2892 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
2285 2893 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
2286 2894 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
2287 2895 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
2288 2896 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
2289 2897 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
2290 2898 5.001232 TCCGTCCCAAAATTCTTGTCTTAG 58.999 41.667 0.00 0.00 0.00 2.18
2291 2899 5.001232 CCGTCCCAAAATTCTTGTCTTAGA 58.999 41.667 0.00 0.00 0.00 2.10
2292 2900 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
2293 2901 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
2294 2902 7.309194 CCGTCCCAAAATTCTTGTCTTAGATTT 60.309 37.037 0.00 0.00 0.00 2.17
2295 2903 7.538678 CGTCCCAAAATTCTTGTCTTAGATTTG 59.461 37.037 0.00 0.00 29.84 2.32
2296 2904 8.360390 GTCCCAAAATTCTTGTCTTAGATTTGT 58.640 33.333 0.00 0.00 28.79 2.83
2297 2905 8.576442 TCCCAAAATTCTTGTCTTAGATTTGTC 58.424 33.333 0.00 0.00 28.79 3.18
2298 2906 8.579863 CCCAAAATTCTTGTCTTAGATTTGTCT 58.420 33.333 0.00 0.00 28.79 3.41
2306 2914 8.622157 TCTTGTCTTAGATTTGTCTAGATACGG 58.378 37.037 0.00 0.00 0.00 4.02
2307 2915 8.515695 TTGTCTTAGATTTGTCTAGATACGGA 57.484 34.615 0.00 0.00 0.00 4.69
2308 2916 8.693120 TGTCTTAGATTTGTCTAGATACGGAT 57.307 34.615 0.00 0.00 0.00 4.18
2309 2917 8.568794 TGTCTTAGATTTGTCTAGATACGGATG 58.431 37.037 0.00 0.00 0.00 3.51
2310 2918 8.569641 GTCTTAGATTTGTCTAGATACGGATGT 58.430 37.037 0.00 0.00 0.00 3.06
2311 2919 9.788889 TCTTAGATTTGTCTAGATACGGATGTA 57.211 33.333 0.00 0.00 34.45 2.29
2328 2936 8.792831 ACGGATGTATCTAATACTAAAACGTG 57.207 34.615 0.00 0.00 36.70 4.49
2329 2937 8.623903 ACGGATGTATCTAATACTAAAACGTGA 58.376 33.333 0.00 0.00 36.70 4.35
2330 2938 8.899776 CGGATGTATCTAATACTAAAACGTGAC 58.100 37.037 0.00 0.00 36.70 3.67
2331 2939 9.962783 GGATGTATCTAATACTAAAACGTGACT 57.037 33.333 0.00 0.00 36.70 3.41
2338 2946 9.917129 TCTAATACTAAAACGTGACTTGATTCA 57.083 29.630 0.00 0.00 0.00 2.57
2341 2949 6.481954 ACTAAAACGTGACTTGATTCATCC 57.518 37.500 0.00 0.00 0.00 3.51
2342 2950 4.404507 AAAACGTGACTTGATTCATCCG 57.595 40.909 0.00 0.00 0.00 4.18
2343 2951 2.743636 ACGTGACTTGATTCATCCGT 57.256 45.000 0.00 0.00 0.00 4.69
2344 2952 3.861276 ACGTGACTTGATTCATCCGTA 57.139 42.857 0.00 0.00 29.33 4.02
2345 2953 4.386867 ACGTGACTTGATTCATCCGTAT 57.613 40.909 0.00 0.00 29.33 3.06
2346 2954 4.755411 ACGTGACTTGATTCATCCGTATT 58.245 39.130 0.00 0.00 29.33 1.89
2347 2955 5.175859 ACGTGACTTGATTCATCCGTATTT 58.824 37.500 0.00 0.00 29.33 1.40
2348 2956 6.334989 ACGTGACTTGATTCATCCGTATTTA 58.665 36.000 0.00 0.00 29.33 1.40
2349 2957 6.475727 ACGTGACTTGATTCATCCGTATTTAG 59.524 38.462 0.00 0.00 29.33 1.85
2350 2958 6.695713 CGTGACTTGATTCATCCGTATTTAGA 59.304 38.462 0.00 0.00 0.00 2.10
2351 2959 7.306051 CGTGACTTGATTCATCCGTATTTAGAC 60.306 40.741 0.00 0.00 0.00 2.59
2352 2960 7.491372 GTGACTTGATTCATCCGTATTTAGACA 59.509 37.037 0.00 0.00 0.00 3.41
2353 2961 8.038351 TGACTTGATTCATCCGTATTTAGACAA 58.962 33.333 0.00 0.00 0.00 3.18
2354 2962 8.786826 ACTTGATTCATCCGTATTTAGACAAA 57.213 30.769 0.00 0.00 0.00 2.83
2355 2963 9.396022 ACTTGATTCATCCGTATTTAGACAAAT 57.604 29.630 0.00 0.00 38.02 2.32
2378 2986 9.463443 AAATTTAAGACAAGAATTTTGAGACGG 57.537 29.630 0.00 0.00 31.00 4.79
2379 2987 7.795482 TTTAAGACAAGAATTTTGAGACGGA 57.205 32.000 7.18 0.00 0.00 4.69
2380 2988 5.931441 AAGACAAGAATTTTGAGACGGAG 57.069 39.130 7.18 0.00 0.00 4.63
2381 2989 4.319177 AGACAAGAATTTTGAGACGGAGG 58.681 43.478 7.18 0.00 0.00 4.30
2382 2990 3.412386 ACAAGAATTTTGAGACGGAGGG 58.588 45.455 7.18 0.00 0.00 4.30
2383 2991 3.072476 ACAAGAATTTTGAGACGGAGGGA 59.928 43.478 7.18 0.00 0.00 4.20
2384 2992 3.618690 AGAATTTTGAGACGGAGGGAG 57.381 47.619 0.00 0.00 0.00 4.30
2385 2993 2.907042 AGAATTTTGAGACGGAGGGAGT 59.093 45.455 0.00 0.00 0.00 3.85
2386 2994 4.094476 AGAATTTTGAGACGGAGGGAGTA 58.906 43.478 0.00 0.00 0.00 2.59
2387 2995 3.889520 ATTTTGAGACGGAGGGAGTAC 57.110 47.619 0.00 0.00 0.00 2.73
2398 3006 3.057456 CGGAGGGAGTACATGCATACTAC 60.057 52.174 0.00 0.20 35.48 2.73
2436 3044 0.824109 TGCTTCCTCATCGTGTAGGG 59.176 55.000 0.00 0.00 33.40 3.53
2466 3084 4.872691 TGCTGTAAGATAAGCTTGCTCTTC 59.127 41.667 22.20 16.23 39.62 2.87
2493 3111 5.276395 CCTGCGTGTCAATAGAATTACTTCG 60.276 44.000 0.00 0.00 36.45 3.79
2633 3251 6.828273 AGTAAATGCACACAGCCAAATATCTA 59.172 34.615 0.00 0.00 44.83 1.98
2654 3272 7.959658 TCTATGGATGTTCAATTCCAAATGT 57.040 32.000 0.00 0.00 44.83 2.71
2716 3334 4.773323 AAGCTTGTTCTTAATCCTGTGC 57.227 40.909 0.00 0.00 0.00 4.57
2727 3345 2.656560 ATCCTGTGCGTCAGTAGAAC 57.343 50.000 7.71 0.00 42.19 3.01
2777 3395 4.638421 TGGAATTGGTATCGATCAAACCAC 59.362 41.667 16.41 7.41 42.84 4.16
2786 3404 7.709182 TGGTATCGATCAAACCACTAACTATTG 59.291 37.037 13.41 0.00 38.36 1.90
2849 3655 5.949735 ACGAAGTATGCAAAAATTGGTAGG 58.050 37.500 0.00 0.00 41.94 3.18
2857 3663 4.754114 TGCAAAAATTGGTAGGAAATGCAC 59.246 37.500 0.00 0.00 36.46 4.57
2924 3731 0.806102 CGTTGTGTAGGAGGATGCGG 60.806 60.000 0.00 0.00 0.00 5.69
2925 3732 0.249398 GTTGTGTAGGAGGATGCGGT 59.751 55.000 0.00 0.00 0.00 5.68
2973 3791 6.340962 TGCTTTGCTTCAGTAGAACTAGTA 57.659 37.500 0.00 0.00 0.00 1.82
3010 3828 4.260375 CGAACAACCAGCATTGCTATCTAC 60.260 45.833 11.55 0.00 36.40 2.59
3011 3829 4.220693 ACAACCAGCATTGCTATCTACA 57.779 40.909 11.55 0.00 36.40 2.74
3042 3860 2.851195 ACTAGCTGTTGGTTCCAAGTG 58.149 47.619 4.37 2.55 0.00 3.16
3043 3861 2.154462 CTAGCTGTTGGTTCCAAGTGG 58.846 52.381 4.37 0.00 0.00 4.00
3045 3863 1.493022 AGCTGTTGGTTCCAAGTGGTA 59.507 47.619 4.37 0.00 36.34 3.25
3046 3864 2.092103 AGCTGTTGGTTCCAAGTGGTAA 60.092 45.455 4.37 0.00 36.34 2.85
3047 3865 2.034179 GCTGTTGGTTCCAAGTGGTAAC 59.966 50.000 4.37 1.37 36.34 2.50
3167 4091 0.036010 AGGTATGCGCAGTTGCTCTT 60.036 50.000 18.32 0.00 39.32 2.85
3171 4095 1.699656 ATGCGCAGTTGCTCTTAGCG 61.700 55.000 18.32 0.00 46.26 4.26
3370 4295 3.787001 CAAGGGGAGGACGAGGCC 61.787 72.222 0.00 0.00 0.00 5.19
3407 4333 2.398252 TGACGAGGACGAGTGATAGT 57.602 50.000 0.00 0.00 42.66 2.12
3422 4348 5.547465 AGTGATAGTCGTCTAGAGAGATGG 58.453 45.833 0.00 0.00 38.97 3.51
3427 4353 2.875933 GTCGTCTAGAGAGATGGACCTG 59.124 54.545 0.00 0.00 38.97 4.00
3434 4360 1.208293 GAGAGATGGACCTGGTTGGAC 59.792 57.143 0.00 0.00 39.71 4.02
3442 4368 2.738521 CTGGTTGGACGCTCGGTG 60.739 66.667 0.00 0.00 0.00 4.94
3445 4371 2.315386 GGTTGGACGCTCGGTGTTC 61.315 63.158 0.00 0.00 0.00 3.18
3473 4399 5.104485 AGGATGATGGTAGGTTTGGTACTTC 60.104 44.000 0.00 0.00 0.00 3.01
3554 4480 0.474184 GGGGATCACGGGATTGATGT 59.526 55.000 0.00 0.00 36.30 3.06
3555 4481 1.597742 GGGATCACGGGATTGATGTG 58.402 55.000 0.00 0.00 36.30 3.21
3556 4482 1.597742 GGATCACGGGATTGATGTGG 58.402 55.000 0.00 0.00 36.30 4.17
3557 4483 0.947244 GATCACGGGATTGATGTGGC 59.053 55.000 0.00 0.00 36.30 5.01
3558 4484 0.548031 ATCACGGGATTGATGTGGCT 59.452 50.000 0.00 0.00 34.79 4.75
3559 4485 0.107703 TCACGGGATTGATGTGGCTC 60.108 55.000 0.00 0.00 34.43 4.70
3560 4486 1.097547 CACGGGATTGATGTGGCTCC 61.098 60.000 0.00 0.00 0.00 4.70
3561 4487 1.526917 CGGGATTGATGTGGCTCCC 60.527 63.158 0.00 0.00 43.37 4.30
3562 4488 1.152673 GGGATTGATGTGGCTCCCC 60.153 63.158 0.00 0.00 41.35 4.81
3563 4489 1.649271 GGGATTGATGTGGCTCCCCT 61.649 60.000 0.00 0.00 41.35 4.79
3564 4490 0.466922 GGATTGATGTGGCTCCCCTG 60.467 60.000 0.00 0.00 0.00 4.45
3565 4491 1.076485 ATTGATGTGGCTCCCCTGC 60.076 57.895 0.00 0.00 0.00 4.85
3573 4499 4.259952 GCTCCCCTGCCAATTACC 57.740 61.111 0.00 0.00 0.00 2.85
3574 4500 1.615262 GCTCCCCTGCCAATTACCT 59.385 57.895 0.00 0.00 0.00 3.08
3575 4501 0.753111 GCTCCCCTGCCAATTACCTG 60.753 60.000 0.00 0.00 0.00 4.00
3576 4502 0.918983 CTCCCCTGCCAATTACCTGA 59.081 55.000 0.00 0.00 0.00 3.86
3577 4503 1.284785 CTCCCCTGCCAATTACCTGAA 59.715 52.381 0.00 0.00 0.00 3.02
3578 4504 1.929494 TCCCCTGCCAATTACCTGAAT 59.071 47.619 0.00 0.00 0.00 2.57
3579 4505 2.091885 TCCCCTGCCAATTACCTGAATC 60.092 50.000 0.00 0.00 0.00 2.52
3580 4506 2.358090 CCCCTGCCAATTACCTGAATCA 60.358 50.000 0.00 0.00 0.00 2.57
3581 4507 3.364549 CCCTGCCAATTACCTGAATCAA 58.635 45.455 0.00 0.00 0.00 2.57
3582 4508 3.131046 CCCTGCCAATTACCTGAATCAAC 59.869 47.826 0.00 0.00 0.00 3.18
3583 4509 3.181497 CCTGCCAATTACCTGAATCAACG 60.181 47.826 0.00 0.00 0.00 4.10
3584 4510 3.417101 TGCCAATTACCTGAATCAACGT 58.583 40.909 0.00 0.00 0.00 3.99
3585 4511 4.580868 TGCCAATTACCTGAATCAACGTA 58.419 39.130 0.00 0.00 0.00 3.57
3586 4512 4.634004 TGCCAATTACCTGAATCAACGTAG 59.366 41.667 0.00 0.00 0.00 3.51
3587 4513 4.495844 GCCAATTACCTGAATCAACGTAGC 60.496 45.833 0.00 0.00 0.00 3.58
3588 4514 4.634004 CCAATTACCTGAATCAACGTAGCA 59.366 41.667 0.00 0.00 0.00 3.49
3589 4515 5.220662 CCAATTACCTGAATCAACGTAGCAG 60.221 44.000 0.00 0.00 0.00 4.24
3591 4517 1.009829 CCTGAATCAACGTAGCAGGC 58.990 55.000 0.00 0.00 39.60 4.85
3592 4518 1.406069 CCTGAATCAACGTAGCAGGCT 60.406 52.381 0.00 0.00 39.60 4.58
3593 4519 2.350522 CTGAATCAACGTAGCAGGCTT 58.649 47.619 0.00 0.00 0.00 4.35
3594 4520 3.521560 CTGAATCAACGTAGCAGGCTTA 58.478 45.455 0.00 0.00 0.00 3.09
3595 4521 3.521560 TGAATCAACGTAGCAGGCTTAG 58.478 45.455 0.00 0.00 0.00 2.18
3596 4522 1.941325 ATCAACGTAGCAGGCTTAGC 58.059 50.000 0.00 0.00 0.00 3.09
3597 4523 0.895530 TCAACGTAGCAGGCTTAGCT 59.104 50.000 3.59 4.64 45.77 3.32
3598 4524 1.002366 CAACGTAGCAGGCTTAGCTG 58.998 55.000 9.42 1.75 43.33 4.24
3599 4525 0.741221 AACGTAGCAGGCTTAGCTGC 60.741 55.000 16.73 16.73 43.33 5.25
3603 4529 2.185350 GCAGGCTTAGCTGCGAGA 59.815 61.111 3.59 0.00 36.83 4.04
3604 4530 1.448540 GCAGGCTTAGCTGCGAGAA 60.449 57.895 3.59 0.00 36.83 2.87
3605 4531 0.813210 GCAGGCTTAGCTGCGAGAAT 60.813 55.000 3.59 0.00 36.83 2.40
3606 4532 1.539065 GCAGGCTTAGCTGCGAGAATA 60.539 52.381 3.59 0.00 36.83 1.75
3607 4533 2.869636 GCAGGCTTAGCTGCGAGAATAT 60.870 50.000 3.59 0.00 36.83 1.28
3608 4534 3.397482 CAGGCTTAGCTGCGAGAATATT 58.603 45.455 3.59 0.00 0.00 1.28
3609 4535 4.560128 CAGGCTTAGCTGCGAGAATATTA 58.440 43.478 3.59 0.00 0.00 0.98
3610 4536 5.174395 CAGGCTTAGCTGCGAGAATATTAT 58.826 41.667 3.59 0.00 0.00 1.28
3611 4537 5.290643 CAGGCTTAGCTGCGAGAATATTATC 59.709 44.000 3.59 0.00 0.00 1.75
3612 4538 4.266502 GGCTTAGCTGCGAGAATATTATCG 59.733 45.833 24.38 24.38 44.04 2.92
3613 4539 4.859798 GCTTAGCTGCGAGAATATTATCGT 59.140 41.667 27.60 14.31 43.22 3.73
3614 4540 5.346281 GCTTAGCTGCGAGAATATTATCGTT 59.654 40.000 27.60 16.11 43.22 3.85
3615 4541 6.128795 GCTTAGCTGCGAGAATATTATCGTTT 60.129 38.462 27.60 15.83 43.22 3.60
3616 4542 7.569591 GCTTAGCTGCGAGAATATTATCGTTTT 60.570 37.037 27.60 16.10 43.22 2.43
3617 4543 6.604735 AGCTGCGAGAATATTATCGTTTTT 57.395 33.333 27.60 12.90 43.22 1.94
3635 4561 2.598686 TTTTGTGCTGCTTTGCATCA 57.401 40.000 0.00 0.00 45.23 3.07
3636 4562 2.143008 TTTGTGCTGCTTTGCATCAG 57.857 45.000 0.00 6.74 45.23 2.90
3637 4563 1.034356 TTGTGCTGCTTTGCATCAGT 58.966 45.000 0.00 0.00 45.23 3.41
3638 4564 0.594602 TGTGCTGCTTTGCATCAGTC 59.405 50.000 0.00 6.07 45.23 3.51
3639 4565 0.879765 GTGCTGCTTTGCATCAGTCT 59.120 50.000 0.00 0.00 45.23 3.24
3640 4566 1.135746 GTGCTGCTTTGCATCAGTCTC 60.136 52.381 0.00 3.89 45.23 3.36
3641 4567 1.162698 GCTGCTTTGCATCAGTCTCA 58.837 50.000 11.23 0.00 38.13 3.27
3642 4568 1.135746 GCTGCTTTGCATCAGTCTCAC 60.136 52.381 11.23 0.00 38.13 3.51
3643 4569 1.128136 CTGCTTTGCATCAGTCTCACG 59.872 52.381 0.00 0.00 38.13 4.35
3670 4596 2.737252 GTTCCCTCGTCTGATTGTTGTC 59.263 50.000 0.00 0.00 0.00 3.18
3684 4610 7.014518 TCTGATTGTTGTCTTTGATTGATTGGT 59.985 33.333 0.00 0.00 0.00 3.67
3704 4630 7.696992 TTGGTGAAGTTACTCTTTGTTCTTT 57.303 32.000 0.00 0.00 36.40 2.52
3705 4631 8.795842 TTGGTGAAGTTACTCTTTGTTCTTTA 57.204 30.769 0.00 0.00 36.40 1.85
3711 4637 9.665264 GAAGTTACTCTTTGTTCTTTACCATTG 57.335 33.333 0.00 0.00 36.40 2.82
3863 4804 1.263776 GTCTCATCAGCGTGAACGAG 58.736 55.000 7.10 0.00 43.02 4.18
3866 4807 0.601057 TCATCAGCGTGAACGAGGAA 59.399 50.000 7.10 0.00 43.02 3.36
3907 4848 1.347707 GATCCCTGGTCACACAAGTCA 59.652 52.381 0.00 0.00 0.00 3.41
3920 5892 7.434013 GGTCACACAAGTCAACGAAAATAAAAT 59.566 33.333 0.00 0.00 0.00 1.82
3949 5921 4.646492 GGTTGGATGCATCTTGGATTAACT 59.354 41.667 25.28 0.00 31.48 2.24
4049 6021 2.880963 TGCAAAGCAAACCTGTTACC 57.119 45.000 0.00 0.00 34.76 2.85
4061 6033 1.348064 CTGTTACCTGTCTGGGTCCA 58.652 55.000 0.33 0.00 40.48 4.02
4079 6051 2.306219 TCCAAACCAATGATACGTCCCA 59.694 45.455 0.00 0.00 0.00 4.37
4092 6064 1.271163 ACGTCCCATCGTTTCCACATT 60.271 47.619 0.00 0.00 41.37 2.71
4144 6116 4.292145 TGCCGGAATTGCACCCCA 62.292 61.111 5.05 0.00 32.85 4.96
4171 6145 2.818111 TGCAGGACCATTTGCAACA 58.182 47.368 0.00 0.00 46.42 3.33
4179 6153 3.507233 GGACCATTTGCAACAGAATCTCA 59.493 43.478 0.00 0.00 0.00 3.27
4181 6155 3.890756 ACCATTTGCAACAGAATCTCACA 59.109 39.130 0.00 0.00 0.00 3.58
4205 6179 1.429021 CATTTGGTCGGGTGCGATG 59.571 57.895 0.00 0.00 0.00 3.84
4227 6201 0.940126 CGGCCCTCAAATCTCAATCG 59.060 55.000 0.00 0.00 0.00 3.34
4241 6215 3.546271 TCTCAATCGATCACGCTTTTACG 59.454 43.478 0.00 0.00 39.58 3.18
4249 6223 3.214697 TCACGCTTTTACGACGGAATA 57.785 42.857 0.00 0.00 36.70 1.75
4254 6228 4.083820 CGCTTTTACGACGGAATAAAACC 58.916 43.478 0.00 0.00 34.06 3.27
4286 6260 1.555075 GTGCTACTCCTGTTGATGGGA 59.445 52.381 0.00 0.00 0.00 4.37
4290 6264 2.134789 ACTCCTGTTGATGGGAATGC 57.865 50.000 0.00 0.00 0.00 3.56
4308 6282 0.247814 GCCTGATTGCATCACGAACG 60.248 55.000 0.00 0.00 35.06 3.95
4328 6302 4.477780 ACGGCAAACAAATATTGGTTACG 58.522 39.130 18.29 18.29 38.84 3.18
4330 6304 3.615056 GGCAAACAAATATTGGTTACGGC 59.385 43.478 8.67 12.04 38.84 5.68
4350 6324 4.926238 CGGCTACAGATAGATGTTTCCATC 59.074 45.833 0.00 0.00 46.56 3.51
4370 6344 0.179059 ACACGGTGTGTTGATCTGCA 60.179 50.000 13.92 0.00 45.08 4.41
4373 6347 0.952497 CGGTGTGTTGATCTGCAGCT 60.952 55.000 9.47 0.00 0.00 4.24
4376 6350 1.463831 GTGTGTTGATCTGCAGCTCTG 59.536 52.381 17.82 0.00 0.00 3.35
4383 6357 2.038164 TGATCTGCAGCTCTGAAACAGT 59.962 45.455 17.82 0.00 32.61 3.55
4390 6364 5.065914 TGCAGCTCTGAAACAGTAAGAATT 58.934 37.500 0.29 0.00 32.61 2.17
4397 6371 8.599774 GCTCTGAAACAGTAAGAATTGATCTAC 58.400 37.037 0.00 0.00 33.03 2.59
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.056328 GTTGCCGGCCTTGTCTCC 61.056 66.667 26.77 0.00 0.00 3.71
1 2 3.423154 CGTTGCCGGCCTTGTCTC 61.423 66.667 26.77 5.28 0.00 3.36
2 3 3.936203 TCGTTGCCGGCCTTGTCT 61.936 61.111 26.77 0.00 33.95 3.41
3 4 3.723348 GTCGTTGCCGGCCTTGTC 61.723 66.667 26.77 8.18 30.83 3.18
13 14 1.721133 CTTTCGTTGGCGTCGTTGC 60.721 57.895 0.00 0.00 39.49 4.17
14 15 1.721133 GCTTTCGTTGGCGTCGTTG 60.721 57.895 0.00 0.00 39.49 4.10
15 16 2.629763 GCTTTCGTTGGCGTCGTT 59.370 55.556 0.00 0.00 39.49 3.85
16 17 3.698463 CGCTTTCGTTGGCGTCGT 61.698 61.111 9.55 0.00 45.34 4.34
56 58 2.617308 TCTTCTTTCACGAGTCACGAGT 59.383 45.455 0.00 0.00 45.77 4.18
57 59 3.269486 TCTTCTTTCACGAGTCACGAG 57.731 47.619 0.00 0.00 45.77 4.18
84 86 5.530519 TCGCTCACTTACTAAATGCTTTG 57.469 39.130 0.00 0.00 0.00 2.77
88 90 2.285488 GGCTCGCTCACTTACTAAATGC 59.715 50.000 0.00 0.00 0.00 3.56
111 113 2.664085 GCTTTGAACTCACTAGTCGAGC 59.336 50.000 17.17 6.60 33.75 5.03
115 117 2.338500 CGGGCTTTGAACTCACTAGTC 58.662 52.381 0.00 0.00 33.75 2.59
138 140 7.713750 ACTCGATCCTTTATAAAATCAGTCGA 58.286 34.615 14.50 14.50 33.93 4.20
149 151 8.475639 AGCTTTAAGACAACTCGATCCTTTATA 58.524 33.333 0.00 0.00 0.00 0.98
205 207 7.563556 TCACATGGATGACTAGACCTACAAATA 59.436 37.037 0.00 0.00 0.00 1.40
246 248 6.537301 TGTAGCATTTGGTTGCACTATAGTAC 59.463 38.462 4.74 0.00 45.23 2.73
255 257 5.707764 TGTAACTATGTAGCATTTGGTTGCA 59.292 36.000 0.00 0.00 45.23 4.08
298 426 7.964604 TGTTTCATGCAAAAATGATGATTGA 57.035 28.000 0.00 0.00 36.48 2.57
305 433 8.499967 CATCTTTCATGTTTCATGCAAAAATGA 58.500 29.630 14.45 14.45 44.12 2.57
308 436 7.789273 ACATCTTTCATGTTTCATGCAAAAA 57.211 28.000 0.00 0.00 0.00 1.94
331 459 3.717350 AACGTGAAATTGTAGCGCTAC 57.283 42.857 35.20 35.20 36.63 3.58
334 462 7.339207 TGTAATATAACGTGAAATTGTAGCGC 58.661 34.615 0.00 0.00 0.00 5.92
360 488 7.735599 TACTACTCGTTAGGATCGCGTAGCT 62.736 48.000 5.77 0.00 44.78 3.32
361 489 4.889345 ACTACTCGTTAGGATCGCGTAGC 61.889 52.174 5.77 0.00 44.78 3.58
362 490 2.799412 ACTACTCGTTAGGATCGCGTAG 59.201 50.000 5.77 11.87 45.68 3.51
363 491 2.826428 ACTACTCGTTAGGATCGCGTA 58.174 47.619 5.77 0.00 31.13 4.42
364 492 1.661341 ACTACTCGTTAGGATCGCGT 58.339 50.000 5.77 0.00 31.13 6.01
365 493 2.799412 AGTACTACTCGTTAGGATCGCG 59.201 50.000 0.00 0.00 31.13 5.87
366 494 3.186205 GGAGTACTACTCGTTAGGATCGC 59.814 52.174 9.65 0.00 45.96 4.58
367 495 3.428198 CGGAGTACTACTCGTTAGGATCG 59.572 52.174 2.99 2.48 45.96 3.69
368 496 4.376146 ACGGAGTACTACTCGTTAGGATC 58.624 47.826 2.99 0.00 45.96 3.36
369 497 4.414337 ACGGAGTACTACTCGTTAGGAT 57.586 45.455 2.99 0.00 45.96 3.24
370 498 3.895232 ACGGAGTACTACTCGTTAGGA 57.105 47.619 2.99 0.00 45.96 2.94
371 499 5.559799 GCATTACGGAGTACTACTCGTTAGG 60.560 48.000 18.84 14.25 45.76 2.69
372 500 5.007039 TGCATTACGGAGTACTACTCGTTAG 59.993 44.000 18.84 12.28 45.76 2.34
373 501 4.875536 TGCATTACGGAGTACTACTCGTTA 59.124 41.667 18.84 12.85 45.76 3.18
374 502 3.691118 TGCATTACGGAGTACTACTCGTT 59.309 43.478 18.84 6.34 45.76 3.85
375 503 3.273434 TGCATTACGGAGTACTACTCGT 58.727 45.455 18.06 18.06 45.76 4.18
376 504 3.957671 TGCATTACGGAGTACTACTCG 57.042 47.619 2.99 7.31 45.76 4.18
377 505 5.246145 AGTTGCATTACGGAGTACTACTC 57.754 43.478 2.99 7.60 45.76 2.59
378 506 5.047519 ACAAGTTGCATTACGGAGTACTACT 60.048 40.000 2.99 0.00 45.76 2.57
379 507 5.166398 ACAAGTTGCATTACGGAGTACTAC 58.834 41.667 1.81 0.00 45.76 2.73
380 508 5.395682 ACAAGTTGCATTACGGAGTACTA 57.604 39.130 1.81 0.00 45.76 1.82
381 509 4.267349 ACAAGTTGCATTACGGAGTACT 57.733 40.909 1.81 0.00 45.76 2.73
382 510 4.449743 TCAACAAGTTGCATTACGGAGTAC 59.550 41.667 8.04 0.00 40.77 2.73
383 511 4.633175 TCAACAAGTTGCATTACGGAGTA 58.367 39.130 8.04 0.00 40.41 2.59
384 512 3.472652 TCAACAAGTTGCATTACGGAGT 58.527 40.909 8.04 0.00 41.96 3.85
385 513 4.481930 TTCAACAAGTTGCATTACGGAG 57.518 40.909 8.04 0.00 40.24 4.63
386 514 4.320861 CCATTCAACAAGTTGCATTACGGA 60.321 41.667 8.04 0.00 40.24 4.69
387 515 3.919804 CCATTCAACAAGTTGCATTACGG 59.080 43.478 8.04 0.00 40.24 4.02
388 516 4.545610 ACCATTCAACAAGTTGCATTACG 58.454 39.130 8.04 0.00 40.24 3.18
389 517 6.073819 GGAAACCATTCAACAAGTTGCATTAC 60.074 38.462 8.04 0.00 40.24 1.89
390 518 5.988561 GGAAACCATTCAACAAGTTGCATTA 59.011 36.000 8.04 0.00 40.24 1.90
391 519 4.815846 GGAAACCATTCAACAAGTTGCATT 59.184 37.500 8.04 0.00 40.24 3.56
392 520 4.141756 TGGAAACCATTCAACAAGTTGCAT 60.142 37.500 8.04 0.17 40.24 3.96
393 521 3.196469 TGGAAACCATTCAACAAGTTGCA 59.804 39.130 8.04 0.00 40.24 4.08
394 522 3.555547 GTGGAAACCATTCAACAAGTTGC 59.444 43.478 8.04 0.00 39.03 4.17
395 523 4.753233 TGTGGAAACCATTCAACAAGTTG 58.247 39.130 6.60 6.60 44.65 3.16
400 528 7.560368 AGTATTTTTGTGGAAACCATTCAACA 58.440 30.769 0.00 0.00 45.67 3.33
401 529 8.334632 CAAGTATTTTTGTGGAAACCATTCAAC 58.665 33.333 0.00 0.00 39.55 3.18
402 530 8.043710 ACAAGTATTTTTGTGGAAACCATTCAA 58.956 29.630 0.00 0.00 39.68 2.69
403 531 7.560368 ACAAGTATTTTTGTGGAAACCATTCA 58.440 30.769 0.00 0.00 39.68 2.57
404 532 9.535878 TTACAAGTATTTTTGTGGAAACCATTC 57.464 29.630 1.90 0.00 41.18 2.67
405 533 9.892130 TTTACAAGTATTTTTGTGGAAACCATT 57.108 25.926 1.90 0.00 41.18 3.16
406 534 9.892130 TTTTACAAGTATTTTTGTGGAAACCAT 57.108 25.926 1.90 0.00 41.18 3.55
407 535 9.152595 GTTTTACAAGTATTTTTGTGGAAACCA 57.847 29.630 14.71 0.00 41.18 3.67
408 536 9.373603 AGTTTTACAAGTATTTTTGTGGAAACC 57.626 29.630 18.34 0.00 42.12 3.27
410 538 9.291664 CGAGTTTTACAAGTATTTTTGTGGAAA 57.708 29.630 1.90 1.39 41.18 3.13
411 539 8.675504 TCGAGTTTTACAAGTATTTTTGTGGAA 58.324 29.630 1.90 0.00 41.18 3.53
412 540 8.124199 GTCGAGTTTTACAAGTATTTTTGTGGA 58.876 33.333 1.90 0.00 41.18 4.02
413 541 7.377662 GGTCGAGTTTTACAAGTATTTTTGTGG 59.622 37.037 1.90 0.00 41.18 4.17
414 542 7.911205 TGGTCGAGTTTTACAAGTATTTTTGTG 59.089 33.333 1.90 0.00 41.18 3.33
415 543 7.987649 TGGTCGAGTTTTACAAGTATTTTTGT 58.012 30.769 0.00 0.00 43.34 2.83
416 544 7.589954 CCTGGTCGAGTTTTACAAGTATTTTTG 59.410 37.037 0.00 0.00 0.00 2.44
417 545 7.645402 CCTGGTCGAGTTTTACAAGTATTTTT 58.355 34.615 0.00 0.00 0.00 1.94
418 546 6.293790 GCCTGGTCGAGTTTTACAAGTATTTT 60.294 38.462 0.00 0.00 0.00 1.82
419 547 5.180680 GCCTGGTCGAGTTTTACAAGTATTT 59.819 40.000 0.00 0.00 0.00 1.40
420 548 4.694037 GCCTGGTCGAGTTTTACAAGTATT 59.306 41.667 0.00 0.00 0.00 1.89
421 549 4.020485 AGCCTGGTCGAGTTTTACAAGTAT 60.020 41.667 0.00 0.00 0.00 2.12
422 550 3.322828 AGCCTGGTCGAGTTTTACAAGTA 59.677 43.478 0.00 0.00 0.00 2.24
423 551 2.104281 AGCCTGGTCGAGTTTTACAAGT 59.896 45.455 0.00 0.00 0.00 3.16
424 552 2.767505 AGCCTGGTCGAGTTTTACAAG 58.232 47.619 0.00 0.00 0.00 3.16
425 553 2.922740 AGCCTGGTCGAGTTTTACAA 57.077 45.000 0.00 0.00 0.00 2.41
426 554 2.922740 AAGCCTGGTCGAGTTTTACA 57.077 45.000 0.00 0.00 0.00 2.41
427 555 4.501071 TGATAAGCCTGGTCGAGTTTTAC 58.499 43.478 0.00 0.00 0.00 2.01
428 556 4.222145 ACTGATAAGCCTGGTCGAGTTTTA 59.778 41.667 0.00 0.00 0.00 1.52
429 557 3.008049 ACTGATAAGCCTGGTCGAGTTTT 59.992 43.478 0.00 0.00 0.00 2.43
430 558 2.567615 ACTGATAAGCCTGGTCGAGTTT 59.432 45.455 0.00 0.00 0.00 2.66
431 559 2.093973 CACTGATAAGCCTGGTCGAGTT 60.094 50.000 0.00 0.00 0.00 3.01
432 560 1.478510 CACTGATAAGCCTGGTCGAGT 59.521 52.381 0.00 0.00 0.00 4.18
433 561 1.478510 ACACTGATAAGCCTGGTCGAG 59.521 52.381 0.00 0.00 0.00 4.04
434 562 1.557099 ACACTGATAAGCCTGGTCGA 58.443 50.000 0.00 0.00 0.00 4.20
435 563 3.384668 CATACACTGATAAGCCTGGTCG 58.615 50.000 0.00 0.00 0.00 4.79
436 564 3.495100 CCCATACACTGATAAGCCTGGTC 60.495 52.174 0.00 0.00 0.00 4.02
437 565 2.439507 CCCATACACTGATAAGCCTGGT 59.560 50.000 0.00 0.00 0.00 4.00
438 566 2.439507 ACCCATACACTGATAAGCCTGG 59.560 50.000 0.00 0.00 0.00 4.45
439 567 3.845781 ACCCATACACTGATAAGCCTG 57.154 47.619 0.00 0.00 0.00 4.85
440 568 4.557705 AGTACCCATACACTGATAAGCCT 58.442 43.478 0.00 0.00 33.30 4.58
441 569 4.957684 AGTACCCATACACTGATAAGCC 57.042 45.455 0.00 0.00 33.30 4.35
442 570 5.303589 TGGTAGTACCCATACACTGATAAGC 59.696 44.000 16.91 0.00 37.50 3.09
443 571 6.971726 TGGTAGTACCCATACACTGATAAG 57.028 41.667 16.91 0.00 37.50 1.73
444 572 6.899075 ACTTGGTAGTACCCATACACTGATAA 59.101 38.462 16.91 0.00 37.50 1.75
445 573 6.437755 ACTTGGTAGTACCCATACACTGATA 58.562 40.000 16.91 0.00 37.50 2.15
446 574 5.278061 ACTTGGTAGTACCCATACACTGAT 58.722 41.667 16.91 0.00 37.50 2.90
447 575 4.680407 ACTTGGTAGTACCCATACACTGA 58.320 43.478 16.91 0.00 37.50 3.41
448 576 5.416271 AACTTGGTAGTACCCATACACTG 57.584 43.478 16.91 0.00 37.50 3.66
449 577 6.443995 AAAACTTGGTAGTACCCATACACT 57.556 37.500 16.91 0.00 37.50 3.55
470 598 7.757173 TCAAAAACACAGATTGACATCGAAAAA 59.243 29.630 0.00 0.00 34.17 1.94
471 599 7.254137 TCAAAAACACAGATTGACATCGAAAA 58.746 30.769 0.00 0.00 34.17 2.29
472 600 6.790282 TCAAAAACACAGATTGACATCGAAA 58.210 32.000 0.00 0.00 34.17 3.46
473 601 6.038161 ACTCAAAAACACAGATTGACATCGAA 59.962 34.615 0.00 0.00 34.17 3.71
474 602 5.527214 ACTCAAAAACACAGATTGACATCGA 59.473 36.000 0.00 0.00 34.17 3.59
475 603 5.751680 ACTCAAAAACACAGATTGACATCG 58.248 37.500 0.00 0.00 34.17 3.84
476 604 9.683069 AATTACTCAAAAACACAGATTGACATC 57.317 29.630 0.00 0.00 0.00 3.06
478 606 9.868277 AAAATTACTCAAAAACACAGATTGACA 57.132 25.926 0.00 0.00 0.00 3.58
495 623 8.793592 AGACACCCATGAGTTTAAAAATTACTC 58.206 33.333 0.00 0.00 38.96 2.59
496 624 8.576442 CAGACACCCATGAGTTTAAAAATTACT 58.424 33.333 0.00 0.00 0.00 2.24
497 625 8.573035 TCAGACACCCATGAGTTTAAAAATTAC 58.427 33.333 0.00 0.00 0.00 1.89
498 626 8.698973 TCAGACACCCATGAGTTTAAAAATTA 57.301 30.769 0.00 0.00 0.00 1.40
499 627 7.595819 TCAGACACCCATGAGTTTAAAAATT 57.404 32.000 0.00 0.00 0.00 1.82
500 628 7.219484 CTCAGACACCCATGAGTTTAAAAAT 57.781 36.000 0.00 0.00 38.49 1.82
501 629 6.633500 CTCAGACACCCATGAGTTTAAAAA 57.367 37.500 0.00 0.00 38.49 1.94
509 637 2.847327 ACAACTCAGACACCCATGAG 57.153 50.000 0.00 0.81 46.76 2.90
510 638 3.576078 AAACAACTCAGACACCCATGA 57.424 42.857 0.00 0.00 0.00 3.07
511 639 4.499696 GGAAAAACAACTCAGACACCCATG 60.500 45.833 0.00 0.00 0.00 3.66
512 640 3.636764 GGAAAAACAACTCAGACACCCAT 59.363 43.478 0.00 0.00 0.00 4.00
513 641 3.020984 GGAAAAACAACTCAGACACCCA 58.979 45.455 0.00 0.00 0.00 4.51
514 642 3.020984 TGGAAAAACAACTCAGACACCC 58.979 45.455 0.00 0.00 0.00 4.61
515 643 4.421058 GTTGGAAAAACAACTCAGACACC 58.579 43.478 0.00 0.00 45.49 4.16
522 650 4.465632 AGTTGGGTTGGAAAAACAACTC 57.534 40.909 8.70 5.61 45.79 3.01
525 653 3.445987 AGGAGTTGGGTTGGAAAAACAA 58.554 40.909 0.00 0.00 0.00 2.83
526 654 3.028130 GAGGAGTTGGGTTGGAAAAACA 58.972 45.455 0.00 0.00 0.00 2.83
527 655 2.364324 GGAGGAGTTGGGTTGGAAAAAC 59.636 50.000 0.00 0.00 0.00 2.43
528 656 2.673258 GGAGGAGTTGGGTTGGAAAAA 58.327 47.619 0.00 0.00 0.00 1.94
529 657 1.477923 CGGAGGAGTTGGGTTGGAAAA 60.478 52.381 0.00 0.00 0.00 2.29
530 658 0.109723 CGGAGGAGTTGGGTTGGAAA 59.890 55.000 0.00 0.00 0.00 3.13
531 659 1.758592 CGGAGGAGTTGGGTTGGAA 59.241 57.895 0.00 0.00 0.00 3.53
532 660 3.478780 CGGAGGAGTTGGGTTGGA 58.521 61.111 0.00 0.00 0.00 3.53
545 673 2.281761 AGGCAAGCAACACCGGAG 60.282 61.111 9.46 1.26 0.00 4.63
546 674 2.594303 CAGGCAAGCAACACCGGA 60.594 61.111 9.46 0.00 0.00 5.14
547 675 2.906897 ACAGGCAAGCAACACCGG 60.907 61.111 0.00 0.00 0.00 5.28
548 676 2.332514 CACAGGCAAGCAACACCG 59.667 61.111 0.00 0.00 0.00 4.94
549 677 2.028043 GCACAGGCAAGCAACACC 59.972 61.111 0.00 0.00 40.72 4.16
550 678 2.028043 GGCACAGGCAAGCAACAC 59.972 61.111 0.00 0.00 43.71 3.32
551 679 3.594775 CGGCACAGGCAAGCAACA 61.595 61.111 0.00 0.00 43.71 3.33
552 680 3.286751 TCGGCACAGGCAAGCAAC 61.287 61.111 0.00 0.00 43.71 4.17
553 681 2.390306 TAGTCGGCACAGGCAAGCAA 62.390 55.000 0.00 0.00 43.71 3.91
554 682 2.786539 CTAGTCGGCACAGGCAAGCA 62.787 60.000 0.00 0.00 43.71 3.91
555 683 2.047274 TAGTCGGCACAGGCAAGC 60.047 61.111 0.00 0.00 43.71 4.01
556 684 2.103042 GCTAGTCGGCACAGGCAAG 61.103 63.158 0.00 0.00 43.71 4.01
557 685 2.047274 GCTAGTCGGCACAGGCAA 60.047 61.111 0.00 0.00 43.71 4.52
558 686 2.878089 TTGCTAGTCGGCACAGGCA 61.878 57.895 0.00 0.00 42.27 4.75
559 687 2.047274 TTGCTAGTCGGCACAGGC 60.047 61.111 0.00 0.00 42.27 4.85
560 688 0.602638 TTGTTGCTAGTCGGCACAGG 60.603 55.000 0.00 0.00 42.27 4.00
561 689 0.792640 CTTGTTGCTAGTCGGCACAG 59.207 55.000 0.00 0.00 42.27 3.66
562 690 0.602638 CCTTGTTGCTAGTCGGCACA 60.603 55.000 0.00 0.00 42.27 4.57
563 691 0.320421 TCCTTGTTGCTAGTCGGCAC 60.320 55.000 0.00 0.00 42.27 5.01
564 692 0.394938 TTCCTTGTTGCTAGTCGGCA 59.605 50.000 0.00 0.00 40.74 5.69
565 693 1.666189 GATTCCTTGTTGCTAGTCGGC 59.334 52.381 0.00 0.00 0.00 5.54
566 694 2.972625 TGATTCCTTGTTGCTAGTCGG 58.027 47.619 0.00 0.00 0.00 4.79
567 695 5.327091 CATTTGATTCCTTGTTGCTAGTCG 58.673 41.667 0.00 0.00 0.00 4.18
568 696 5.415701 TCCATTTGATTCCTTGTTGCTAGTC 59.584 40.000 0.00 0.00 0.00 2.59
569 697 5.324409 TCCATTTGATTCCTTGTTGCTAGT 58.676 37.500 0.00 0.00 0.00 2.57
570 698 5.416952 ACTCCATTTGATTCCTTGTTGCTAG 59.583 40.000 0.00 0.00 0.00 3.42
571 699 5.324409 ACTCCATTTGATTCCTTGTTGCTA 58.676 37.500 0.00 0.00 0.00 3.49
572 700 4.154942 ACTCCATTTGATTCCTTGTTGCT 58.845 39.130 0.00 0.00 0.00 3.91
573 701 4.525912 ACTCCATTTGATTCCTTGTTGC 57.474 40.909 0.00 0.00 0.00 4.17
574 702 6.980593 TGTAACTCCATTTGATTCCTTGTTG 58.019 36.000 0.00 0.00 0.00 3.33
575 703 7.505585 TCTTGTAACTCCATTTGATTCCTTGTT 59.494 33.333 0.00 0.00 0.00 2.83
576 704 7.004086 TCTTGTAACTCCATTTGATTCCTTGT 58.996 34.615 0.00 0.00 0.00 3.16
577 705 7.452880 TCTTGTAACTCCATTTGATTCCTTG 57.547 36.000 0.00 0.00 0.00 3.61
578 706 9.753674 TTATCTTGTAACTCCATTTGATTCCTT 57.246 29.630 0.00 0.00 0.00 3.36
579 707 9.927081 ATTATCTTGTAACTCCATTTGATTCCT 57.073 29.630 0.00 0.00 0.00 3.36
608 736 9.844790 CTAATCACTCAATCAAGCATTTTGTAA 57.155 29.630 0.00 0.00 0.00 2.41
609 737 8.461222 CCTAATCACTCAATCAAGCATTTTGTA 58.539 33.333 0.00 0.00 0.00 2.41
610 738 7.039504 ACCTAATCACTCAATCAAGCATTTTGT 60.040 33.333 0.00 0.00 0.00 2.83
611 739 7.318141 ACCTAATCACTCAATCAAGCATTTTG 58.682 34.615 0.00 0.00 0.00 2.44
612 740 7.177216 TGACCTAATCACTCAATCAAGCATTTT 59.823 33.333 0.00 0.00 29.99 1.82
613 741 6.660521 TGACCTAATCACTCAATCAAGCATTT 59.339 34.615 0.00 0.00 29.99 2.32
614 742 6.182627 TGACCTAATCACTCAATCAAGCATT 58.817 36.000 0.00 0.00 29.99 3.56
615 743 5.748402 TGACCTAATCACTCAATCAAGCAT 58.252 37.500 0.00 0.00 29.99 3.79
616 744 5.164620 TGACCTAATCACTCAATCAAGCA 57.835 39.130 0.00 0.00 29.99 3.91
617 745 6.500684 TTTGACCTAATCACTCAATCAAGC 57.499 37.500 0.00 0.00 36.92 4.01
618 746 9.918630 AAATTTTGACCTAATCACTCAATCAAG 57.081 29.630 0.00 0.00 36.92 3.02
620 748 9.912634 GAAAATTTTGACCTAATCACTCAATCA 57.087 29.630 8.47 0.00 36.92 2.57
621 749 9.912634 TGAAAATTTTGACCTAATCACTCAATC 57.087 29.630 8.47 0.00 36.92 2.67
624 752 9.912634 GATTGAAAATTTTGACCTAATCACTCA 57.087 29.630 8.47 0.00 36.92 3.41
625 753 9.065871 CGATTGAAAATTTTGACCTAATCACTC 57.934 33.333 8.47 0.97 36.92 3.51
626 754 8.028938 CCGATTGAAAATTTTGACCTAATCACT 58.971 33.333 8.47 0.00 36.92 3.41
627 755 7.201435 GCCGATTGAAAATTTTGACCTAATCAC 60.201 37.037 8.47 3.18 36.92 3.06
628 756 6.811170 GCCGATTGAAAATTTTGACCTAATCA 59.189 34.615 8.47 0.00 34.65 2.57
629 757 7.009540 CAGCCGATTGAAAATTTTGACCTAATC 59.990 37.037 8.47 9.02 0.00 1.75
630 758 6.813152 CAGCCGATTGAAAATTTTGACCTAAT 59.187 34.615 8.47 1.60 0.00 1.73
631 759 6.015856 TCAGCCGATTGAAAATTTTGACCTAA 60.016 34.615 8.47 0.00 0.00 2.69
632 760 5.475220 TCAGCCGATTGAAAATTTTGACCTA 59.525 36.000 8.47 0.00 0.00 3.08
633 761 4.280677 TCAGCCGATTGAAAATTTTGACCT 59.719 37.500 8.47 0.00 0.00 3.85
634 762 4.555262 TCAGCCGATTGAAAATTTTGACC 58.445 39.130 8.47 0.00 0.00 4.02
635 763 5.460646 TCTCAGCCGATTGAAAATTTTGAC 58.539 37.500 8.47 0.00 0.00 3.18
636 764 5.703978 TCTCAGCCGATTGAAAATTTTGA 57.296 34.783 8.47 0.00 0.00 2.69
637 765 6.151691 TCTTCTCAGCCGATTGAAAATTTTG 58.848 36.000 8.47 0.00 0.00 2.44
638 766 6.331369 TCTTCTCAGCCGATTGAAAATTTT 57.669 33.333 2.28 2.28 0.00 1.82
639 767 5.964958 TCTTCTCAGCCGATTGAAAATTT 57.035 34.783 0.00 0.00 0.00 1.82
640 768 5.964958 TTCTTCTCAGCCGATTGAAAATT 57.035 34.783 0.00 0.00 0.00 1.82
641 769 7.814264 ATATTCTTCTCAGCCGATTGAAAAT 57.186 32.000 0.00 0.00 0.00 1.82
642 770 8.908786 ATATATTCTTCTCAGCCGATTGAAAA 57.091 30.769 0.00 0.00 0.00 2.29
643 771 8.908786 AATATATTCTTCTCAGCCGATTGAAA 57.091 30.769 0.00 0.00 0.00 2.69
644 772 8.908786 AAATATATTCTTCTCAGCCGATTGAA 57.091 30.769 0.00 0.00 0.00 2.69
645 773 8.908786 AAAATATATTCTTCTCAGCCGATTGA 57.091 30.769 0.00 0.00 0.00 2.57
646 774 9.604626 GAAAAATATATTCTTCTCAGCCGATTG 57.395 33.333 4.55 0.00 0.00 2.67
647 775 9.342308 TGAAAAATATATTCTTCTCAGCCGATT 57.658 29.630 11.78 0.00 0.00 3.34
648 776 8.908786 TGAAAAATATATTCTTCTCAGCCGAT 57.091 30.769 11.78 0.00 0.00 4.18
649 777 8.204160 TCTGAAAAATATATTCTTCTCAGCCGA 58.796 33.333 11.78 0.42 31.26 5.54
650 778 8.370493 TCTGAAAAATATATTCTTCTCAGCCG 57.630 34.615 11.78 0.00 31.26 5.52
651 779 8.288913 GCTCTGAAAAATATATTCTTCTCAGCC 58.711 37.037 16.70 9.77 31.26 4.85
652 780 8.834465 TGCTCTGAAAAATATATTCTTCTCAGC 58.166 33.333 18.82 18.82 31.26 4.26
655 783 9.609950 GCATGCTCTGAAAAATATATTCTTCTC 57.390 33.333 11.37 2.40 0.00 2.87
656 784 8.574737 GGCATGCTCTGAAAAATATATTCTTCT 58.425 33.333 18.92 0.00 0.00 2.85
657 785 8.355169 TGGCATGCTCTGAAAAATATATTCTTC 58.645 33.333 18.92 4.80 0.00 2.87
658 786 8.241497 TGGCATGCTCTGAAAAATATATTCTT 57.759 30.769 18.92 0.00 0.00 2.52
659 787 7.828508 TGGCATGCTCTGAAAAATATATTCT 57.171 32.000 18.92 0.00 0.00 2.40
664 792 9.841295 AAATTATTGGCATGCTCTGAAAAATAT 57.159 25.926 18.92 0.00 0.00 1.28
665 793 9.316730 GAAATTATTGGCATGCTCTGAAAAATA 57.683 29.630 18.92 7.83 0.00 1.40
666 794 8.044908 AGAAATTATTGGCATGCTCTGAAAAAT 58.955 29.630 18.92 8.70 0.00 1.82
667 795 7.388437 AGAAATTATTGGCATGCTCTGAAAAA 58.612 30.769 18.92 3.92 0.00 1.94
668 796 6.938507 AGAAATTATTGGCATGCTCTGAAAA 58.061 32.000 18.92 5.50 0.00 2.29
669 797 6.534475 AGAAATTATTGGCATGCTCTGAAA 57.466 33.333 18.92 6.57 0.00 2.69
670 798 6.534475 AAGAAATTATTGGCATGCTCTGAA 57.466 33.333 18.92 7.81 0.00 3.02
671 799 6.534475 AAAGAAATTATTGGCATGCTCTGA 57.466 33.333 18.92 1.38 0.00 3.27
672 800 7.605410 AAAAAGAAATTATTGGCATGCTCTG 57.395 32.000 18.92 0.00 0.00 3.35
719 847 5.126061 GGCCTTCAAATTATTCTCTGCAAGA 59.874 40.000 0.00 0.00 43.69 3.02
720 848 5.105635 TGGCCTTCAAATTATTCTCTGCAAG 60.106 40.000 3.32 0.00 0.00 4.01
722 850 4.343231 TGGCCTTCAAATTATTCTCTGCA 58.657 39.130 3.32 0.00 0.00 4.41
723 851 4.989279 TGGCCTTCAAATTATTCTCTGC 57.011 40.909 3.32 0.00 0.00 4.26
724 852 7.279313 CCAAATTGGCCTTCAAATTATTCTCTG 59.721 37.037 3.32 0.00 39.05 3.35
725 853 7.333323 CCAAATTGGCCTTCAAATTATTCTCT 58.667 34.615 3.32 0.00 39.05 3.10
726 854 6.539826 CCCAAATTGGCCTTCAAATTATTCTC 59.460 38.462 6.48 0.00 39.05 2.87
727 855 6.417258 CCCAAATTGGCCTTCAAATTATTCT 58.583 36.000 6.48 0.00 39.05 2.40
728 856 5.066375 GCCCAAATTGGCCTTCAAATTATTC 59.934 40.000 6.48 0.00 46.11 1.75
766 899 2.224354 CCAGCCCAAAGTGCTCAAAATT 60.224 45.455 0.00 0.00 36.81 1.82
767 900 1.345415 CCAGCCCAAAGTGCTCAAAAT 59.655 47.619 0.00 0.00 36.81 1.82
817 967 2.433446 CCTGTGCAGGCCTTGAGT 59.567 61.111 0.00 0.00 42.44 3.41
829 979 1.513158 CAGAGTAGTCCGGCCTGTG 59.487 63.158 0.00 0.00 0.00 3.66
832 982 2.037367 TGCAGAGTAGTCCGGCCT 59.963 61.111 0.00 0.00 0.00 5.19
880 1031 8.957466 GCCCAGTACTATTTCTAAGTTTCATTT 58.043 33.333 0.00 0.00 0.00 2.32
881 1032 7.556635 GGCCCAGTACTATTTCTAAGTTTCATT 59.443 37.037 0.00 0.00 0.00 2.57
882 1033 7.054751 GGCCCAGTACTATTTCTAAGTTTCAT 58.945 38.462 0.00 0.00 0.00 2.57
883 1034 6.214819 AGGCCCAGTACTATTTCTAAGTTTCA 59.785 38.462 0.00 0.00 0.00 2.69
884 1035 6.651086 AGGCCCAGTACTATTTCTAAGTTTC 58.349 40.000 0.00 0.00 0.00 2.78
885 1036 6.629739 CGAGGCCCAGTACTATTTCTAAGTTT 60.630 42.308 0.00 0.00 0.00 2.66
886 1037 5.163437 CGAGGCCCAGTACTATTTCTAAGTT 60.163 44.000 0.00 0.00 0.00 2.66
900 1051 2.599578 ACGTGTACGAGGCCCAGT 60.600 61.111 11.79 1.68 43.02 4.00
913 1071 0.734253 GAGCTGTGGACTAGCACGTG 60.734 60.000 12.28 12.28 43.53 4.49
916 1074 0.108424 CAGGAGCTGTGGACTAGCAC 60.108 60.000 0.00 0.00 43.53 4.40
934 1094 1.059584 TGGAGGGAAACTGGACTGCA 61.060 55.000 0.00 0.00 0.00 4.41
1132 1294 0.963856 GGAGGGGTTAGGGTTTTGCG 60.964 60.000 0.00 0.00 0.00 4.85
1192 1725 1.144936 GCGAGGGACTTCATGGAGG 59.855 63.158 5.84 0.00 41.55 4.30
1315 1849 2.097825 GCTTCACCTGCAGAAATCCAT 58.902 47.619 17.39 0.00 0.00 3.41
1807 2375 0.877649 AGACAGAGCACAAGCACACG 60.878 55.000 0.00 0.00 45.49 4.49
2048 2650 8.678510 CATTGAACAAACATTTACAGTAACGAC 58.321 33.333 0.00 0.00 0.00 4.34
2113 2718 5.169561 CAGTGTGAAAACAAAACTTCGATCG 59.830 40.000 9.36 9.36 0.00 3.69
2263 2871 1.368374 AGAATTTTGGGACGGAGGGA 58.632 50.000 0.00 0.00 0.00 4.20
2264 2872 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
2265 2873 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
2266 2874 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
2267 2875 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
2268 2876 5.001232 TCTAAGACAAGAATTTTGGGACGG 58.999 41.667 0.00 0.00 0.00 4.79
2269 2877 6.743575 ATCTAAGACAAGAATTTTGGGACG 57.256 37.500 5.68 0.00 0.00 4.79
2270 2878 8.360390 ACAAATCTAAGACAAGAATTTTGGGAC 58.640 33.333 0.00 0.00 33.04 4.46
2271 2879 8.477419 ACAAATCTAAGACAAGAATTTTGGGA 57.523 30.769 0.00 0.00 33.04 4.37
2272 2880 8.579863 AGACAAATCTAAGACAAGAATTTTGGG 58.420 33.333 0.00 0.00 33.04 4.12
2280 2888 8.622157 CCGTATCTAGACAAATCTAAGACAAGA 58.378 37.037 0.00 0.00 36.98 3.02
2281 2889 8.622157 TCCGTATCTAGACAAATCTAAGACAAG 58.378 37.037 0.00 0.00 36.98 3.16
2282 2890 8.515695 TCCGTATCTAGACAAATCTAAGACAA 57.484 34.615 0.00 0.00 36.98 3.18
2283 2891 8.568794 CATCCGTATCTAGACAAATCTAAGACA 58.431 37.037 0.00 0.00 36.98 3.41
2284 2892 8.569641 ACATCCGTATCTAGACAAATCTAAGAC 58.430 37.037 0.00 0.00 36.98 3.01
2285 2893 8.693120 ACATCCGTATCTAGACAAATCTAAGA 57.307 34.615 0.00 0.00 36.98 2.10
2302 2910 9.882996 CACGTTTTAGTATTAGATACATCCGTA 57.117 33.333 0.00 0.00 38.21 4.02
2303 2911 8.623903 TCACGTTTTAGTATTAGATACATCCGT 58.376 33.333 0.00 0.00 38.21 4.69
2304 2912 8.899776 GTCACGTTTTAGTATTAGATACATCCG 58.100 37.037 0.00 0.00 38.21 4.18
2305 2913 9.962783 AGTCACGTTTTAGTATTAGATACATCC 57.037 33.333 0.00 0.00 38.21 3.51
2312 2920 9.917129 TGAATCAAGTCACGTTTTAGTATTAGA 57.083 29.630 0.00 0.00 0.00 2.10
2315 2923 8.665685 GGATGAATCAAGTCACGTTTTAGTATT 58.334 33.333 0.00 0.00 0.00 1.89
2316 2924 7.010183 CGGATGAATCAAGTCACGTTTTAGTAT 59.990 37.037 0.00 0.00 0.00 2.12
2317 2925 6.309494 CGGATGAATCAAGTCACGTTTTAGTA 59.691 38.462 0.00 0.00 0.00 1.82
2318 2926 5.120208 CGGATGAATCAAGTCACGTTTTAGT 59.880 40.000 0.00 0.00 0.00 2.24
2319 2927 5.120208 ACGGATGAATCAAGTCACGTTTTAG 59.880 40.000 0.00 0.00 29.04 1.85
2320 2928 4.992319 ACGGATGAATCAAGTCACGTTTTA 59.008 37.500 0.00 0.00 29.04 1.52
2321 2929 3.813166 ACGGATGAATCAAGTCACGTTTT 59.187 39.130 0.00 0.00 29.04 2.43
2322 2930 3.399330 ACGGATGAATCAAGTCACGTTT 58.601 40.909 0.00 0.00 29.04 3.60
2323 2931 3.040147 ACGGATGAATCAAGTCACGTT 57.960 42.857 0.00 0.00 29.04 3.99
2324 2932 2.743636 ACGGATGAATCAAGTCACGT 57.256 45.000 0.00 0.00 0.00 4.49
2325 2933 5.718649 AAATACGGATGAATCAAGTCACG 57.281 39.130 0.00 0.00 0.00 4.35
2326 2934 7.491372 TGTCTAAATACGGATGAATCAAGTCAC 59.509 37.037 0.00 0.00 0.00 3.67
2327 2935 7.552459 TGTCTAAATACGGATGAATCAAGTCA 58.448 34.615 0.00 0.00 0.00 3.41
2328 2936 8.420374 TTGTCTAAATACGGATGAATCAAGTC 57.580 34.615 0.00 0.00 0.00 3.01
2329 2937 8.786826 TTTGTCTAAATACGGATGAATCAAGT 57.213 30.769 0.00 0.00 0.00 3.16
2352 2960 9.463443 CCGTCTCAAAATTCTTGTCTTAAATTT 57.537 29.630 0.00 0.00 34.86 1.82
2353 2961 8.846211 TCCGTCTCAAAATTCTTGTCTTAAATT 58.154 29.630 0.00 0.00 0.00 1.82
2354 2962 8.391075 TCCGTCTCAAAATTCTTGTCTTAAAT 57.609 30.769 0.00 0.00 0.00 1.40
2355 2963 7.041372 CCTCCGTCTCAAAATTCTTGTCTTAAA 60.041 37.037 0.00 0.00 0.00 1.52
2356 2964 6.426937 CCTCCGTCTCAAAATTCTTGTCTTAA 59.573 38.462 0.00 0.00 0.00 1.85
2357 2965 5.932303 CCTCCGTCTCAAAATTCTTGTCTTA 59.068 40.000 0.00 0.00 0.00 2.10
2358 2966 4.757149 CCTCCGTCTCAAAATTCTTGTCTT 59.243 41.667 0.00 0.00 0.00 3.01
2359 2967 4.319177 CCTCCGTCTCAAAATTCTTGTCT 58.681 43.478 0.00 0.00 0.00 3.41
2360 2968 3.437049 CCCTCCGTCTCAAAATTCTTGTC 59.563 47.826 0.00 0.00 0.00 3.18
2361 2969 3.072476 TCCCTCCGTCTCAAAATTCTTGT 59.928 43.478 0.00 0.00 0.00 3.16
2362 2970 3.674997 TCCCTCCGTCTCAAAATTCTTG 58.325 45.455 0.00 0.00 0.00 3.02
2363 2971 3.328050 ACTCCCTCCGTCTCAAAATTCTT 59.672 43.478 0.00 0.00 0.00 2.52
2364 2972 2.907042 ACTCCCTCCGTCTCAAAATTCT 59.093 45.455 0.00 0.00 0.00 2.40
2365 2973 3.336138 ACTCCCTCCGTCTCAAAATTC 57.664 47.619 0.00 0.00 0.00 2.17
2366 2974 3.581332 TGTACTCCCTCCGTCTCAAAATT 59.419 43.478 0.00 0.00 0.00 1.82
2367 2975 3.170717 TGTACTCCCTCCGTCTCAAAAT 58.829 45.455 0.00 0.00 0.00 1.82
2368 2976 2.600790 TGTACTCCCTCCGTCTCAAAA 58.399 47.619 0.00 0.00 0.00 2.44
2369 2977 2.297698 TGTACTCCCTCCGTCTCAAA 57.702 50.000 0.00 0.00 0.00 2.69
2370 2978 2.100197 CATGTACTCCCTCCGTCTCAA 58.900 52.381 0.00 0.00 0.00 3.02
2371 2979 1.763968 CATGTACTCCCTCCGTCTCA 58.236 55.000 0.00 0.00 0.00 3.27
2372 2980 0.386113 GCATGTACTCCCTCCGTCTC 59.614 60.000 0.00 0.00 0.00 3.36
2373 2981 0.324368 TGCATGTACTCCCTCCGTCT 60.324 55.000 0.00 0.00 0.00 4.18
2374 2982 0.753262 ATGCATGTACTCCCTCCGTC 59.247 55.000 0.00 0.00 0.00 4.79
2375 2983 1.687123 GTATGCATGTACTCCCTCCGT 59.313 52.381 10.16 0.00 0.00 4.69
2376 2984 1.964223 AGTATGCATGTACTCCCTCCG 59.036 52.381 10.16 0.00 28.99 4.63
2377 2985 3.895656 TGTAGTATGCATGTACTCCCTCC 59.104 47.826 10.16 0.00 36.39 4.30
2378 2986 4.827835 TCTGTAGTATGCATGTACTCCCTC 59.172 45.833 10.16 0.00 36.39 4.30
2379 2987 4.804597 TCTGTAGTATGCATGTACTCCCT 58.195 43.478 10.16 0.00 36.39 4.20
2380 2988 5.531122 TTCTGTAGTATGCATGTACTCCC 57.469 43.478 10.16 1.25 36.39 4.30
2381 2989 7.843490 TTTTTCTGTAGTATGCATGTACTCC 57.157 36.000 10.16 0.00 36.39 3.85
2382 2990 9.708222 CAATTTTTCTGTAGTATGCATGTACTC 57.292 33.333 10.16 1.38 36.39 2.59
2383 2991 9.231297 ACAATTTTTCTGTAGTATGCATGTACT 57.769 29.630 10.16 8.48 38.42 2.73
2384 2992 9.490663 GACAATTTTTCTGTAGTATGCATGTAC 57.509 33.333 10.16 11.38 0.00 2.90
2385 2993 9.225436 TGACAATTTTTCTGTAGTATGCATGTA 57.775 29.630 10.16 0.00 0.00 2.29
2386 2994 8.109705 TGACAATTTTTCTGTAGTATGCATGT 57.890 30.769 10.16 0.00 0.00 3.21
2387 2995 8.453320 TCTGACAATTTTTCTGTAGTATGCATG 58.547 33.333 10.16 0.00 0.00 4.06
2398 3006 7.440255 AGGAAGCAAATTCTGACAATTTTTCTG 59.560 33.333 0.00 0.00 38.07 3.02
2436 3044 2.221981 GCTTATCTTACAGCATGCGGAC 59.778 50.000 24.99 0.00 42.53 4.79
2466 3084 5.755375 AGTAATTCTATTGACACGCAGGATG 59.245 40.000 0.00 0.00 40.87 3.51
2493 3111 1.069906 AGTTGTTCGATTCGCAGTTGC 60.070 47.619 0.00 0.00 37.78 4.17
2571 3189 0.821711 CTTTCCACTGGCGAAACCCA 60.822 55.000 0.00 0.00 37.83 4.51
2633 3251 9.386010 CAAATACATTTGGAATTGAACATCCAT 57.614 29.630 6.76 0.00 44.83 3.41
2654 3272 3.199071 CCTACACAGTGGGGCTACAAATA 59.801 47.826 5.31 0.00 30.21 1.40
2716 3334 3.466712 TGCGAACTAGTTCTACTGACG 57.533 47.619 28.30 17.40 37.44 4.35
2727 3345 4.667668 GCTTGATTCACAGTTGCGAACTAG 60.668 45.833 1.95 0.00 40.46 2.57
2812 3430 1.485066 ACTTCGTCCAGTGGTGAAACT 59.515 47.619 9.54 0.85 36.74 2.66
2835 3641 4.754114 TGTGCATTTCCTACCAATTTTTGC 59.246 37.500 0.00 0.00 0.00 3.68
2849 3655 4.423732 AGATATTTTGGCGTGTGCATTTC 58.576 39.130 0.00 0.00 45.35 2.17
2897 3704 1.071071 CTCCTACACAACGGGGAAACA 59.929 52.381 0.00 0.00 0.00 2.83
2905 3712 0.806102 CCGCATCCTCCTACACAACG 60.806 60.000 0.00 0.00 0.00 4.10
2906 3713 0.249398 ACCGCATCCTCCTACACAAC 59.751 55.000 0.00 0.00 0.00 3.32
2924 3731 8.094798 TGTGTTAACAGAAGGATTATGACAAC 57.905 34.615 8.98 0.00 40.36 3.32
2925 3732 8.729756 CATGTGTTAACAGAAGGATTATGACAA 58.270 33.333 8.98 0.00 40.36 3.18
2973 3791 2.183478 TGTTCGATTCACAGGTGCAT 57.817 45.000 0.00 0.00 0.00 3.96
3033 3851 3.208594 AGGAAACGTTACCACTTGGAAC 58.791 45.455 0.00 1.87 38.94 3.62
3036 3854 3.004002 GGAAAGGAAACGTTACCACTTGG 59.996 47.826 0.00 0.00 34.78 3.61
3037 3855 4.219143 GGAAAGGAAACGTTACCACTTG 57.781 45.455 0.00 0.00 29.98 3.16
3043 3861 2.483106 GCAGAGGGAAAGGAAACGTTAC 59.517 50.000 0.00 0.00 29.98 2.50
3045 3863 1.133915 TGCAGAGGGAAAGGAAACGTT 60.134 47.619 0.00 0.00 33.60 3.99
3046 3864 0.472471 TGCAGAGGGAAAGGAAACGT 59.528 50.000 0.00 0.00 0.00 3.99
3047 3865 1.160137 CTGCAGAGGGAAAGGAAACG 58.840 55.000 8.42 0.00 0.00 3.60
3171 4095 0.326264 TGAAAGGAGAGAGCAAGGGC 59.674 55.000 0.00 0.00 41.61 5.19
3326 4251 1.819903 GATATCCTCTACCTCCGTGGC 59.180 57.143 0.00 0.00 40.22 5.01
3370 4295 0.031314 CATCGTCCATCAGGTCCTCG 59.969 60.000 0.00 0.00 35.89 4.63
3407 4333 2.158740 CCAGGTCCATCTCTCTAGACGA 60.159 54.545 0.00 0.00 33.57 4.20
3422 4348 2.432628 CGAGCGTCCAACCAGGTC 60.433 66.667 0.00 0.00 39.02 3.85
3427 4353 2.280592 AACACCGAGCGTCCAACC 60.281 61.111 0.00 0.00 0.00 3.77
3434 4360 0.456221 ATCCTACAGAACACCGAGCG 59.544 55.000 0.00 0.00 0.00 5.03
3442 4368 5.615925 AACCTACCATCATCCTACAGAAC 57.384 43.478 0.00 0.00 0.00 3.01
3445 4371 4.164221 ACCAAACCTACCATCATCCTACAG 59.836 45.833 0.00 0.00 0.00 2.74
3530 4456 1.635817 AATCCCGTGATCCCCACAGG 61.636 60.000 0.00 0.00 45.98 4.00
3542 4468 1.224592 GGAGCCACATCAATCCCGT 59.775 57.895 0.00 0.00 0.00 5.28
3556 4482 0.753111 CAGGTAATTGGCAGGGGAGC 60.753 60.000 0.00 0.00 0.00 4.70
3557 4483 0.918983 TCAGGTAATTGGCAGGGGAG 59.081 55.000 0.00 0.00 0.00 4.30
3558 4484 1.377690 TTCAGGTAATTGGCAGGGGA 58.622 50.000 0.00 0.00 0.00 4.81
3559 4485 2.310538 GATTCAGGTAATTGGCAGGGG 58.689 52.381 0.00 0.00 0.00 4.79
3560 4486 3.017048 TGATTCAGGTAATTGGCAGGG 57.983 47.619 0.00 0.00 0.00 4.45
3561 4487 3.181497 CGTTGATTCAGGTAATTGGCAGG 60.181 47.826 0.00 0.00 0.00 4.85
3562 4488 3.440173 ACGTTGATTCAGGTAATTGGCAG 59.560 43.478 0.00 0.00 0.00 4.85
3563 4489 3.417101 ACGTTGATTCAGGTAATTGGCA 58.583 40.909 0.00 0.00 0.00 4.92
3564 4490 4.495844 GCTACGTTGATTCAGGTAATTGGC 60.496 45.833 0.00 0.00 0.00 4.52
3565 4491 4.634004 TGCTACGTTGATTCAGGTAATTGG 59.366 41.667 0.00 0.00 0.00 3.16
3566 4492 5.220662 CCTGCTACGTTGATTCAGGTAATTG 60.221 44.000 11.88 0.00 39.45 2.32
3567 4493 4.876107 CCTGCTACGTTGATTCAGGTAATT 59.124 41.667 11.88 0.00 39.45 1.40
3568 4494 4.442706 CCTGCTACGTTGATTCAGGTAAT 58.557 43.478 11.88 0.00 39.45 1.89
3569 4495 3.857052 CCTGCTACGTTGATTCAGGTAA 58.143 45.455 11.88 0.00 39.45 2.85
3570 4496 2.418197 GCCTGCTACGTTGATTCAGGTA 60.418 50.000 18.07 0.00 44.53 3.08
3571 4497 1.676014 GCCTGCTACGTTGATTCAGGT 60.676 52.381 18.07 0.00 44.53 4.00
3572 4498 1.009829 GCCTGCTACGTTGATTCAGG 58.990 55.000 14.55 14.55 45.26 3.86
3573 4499 2.015736 AGCCTGCTACGTTGATTCAG 57.984 50.000 0.00 0.00 0.00 3.02
3574 4500 2.472695 AAGCCTGCTACGTTGATTCA 57.527 45.000 0.00 0.00 0.00 2.57
3575 4501 2.285488 GCTAAGCCTGCTACGTTGATTC 59.715 50.000 0.00 0.00 0.00 2.52
3576 4502 2.093447 AGCTAAGCCTGCTACGTTGATT 60.093 45.455 0.00 0.00 39.21 2.57
3577 4503 1.482593 AGCTAAGCCTGCTACGTTGAT 59.517 47.619 0.00 0.00 39.21 2.57
3578 4504 0.895530 AGCTAAGCCTGCTACGTTGA 59.104 50.000 0.00 0.00 39.21 3.18
3579 4505 1.002366 CAGCTAAGCCTGCTACGTTG 58.998 55.000 0.00 0.00 38.92 4.10
3580 4506 3.442996 CAGCTAAGCCTGCTACGTT 57.557 52.632 0.00 0.00 38.92 3.99
3587 4513 2.515926 TATTCTCGCAGCTAAGCCTG 57.484 50.000 0.00 0.00 35.93 4.85
3588 4514 3.760580 AATATTCTCGCAGCTAAGCCT 57.239 42.857 0.00 0.00 0.00 4.58
3589 4515 4.266502 CGATAATATTCTCGCAGCTAAGCC 59.733 45.833 9.89 0.00 0.00 4.35
3590 4516 4.859798 ACGATAATATTCTCGCAGCTAAGC 59.140 41.667 19.63 0.00 38.42 3.09
3591 4517 6.936222 AACGATAATATTCTCGCAGCTAAG 57.064 37.500 19.63 0.00 38.42 2.18
3592 4518 7.709269 AAAACGATAATATTCTCGCAGCTAA 57.291 32.000 19.63 0.00 38.42 3.09
3593 4519 7.709269 AAAAACGATAATATTCTCGCAGCTA 57.291 32.000 19.63 0.00 38.42 3.32
3594 4520 6.604735 AAAAACGATAATATTCTCGCAGCT 57.395 33.333 19.63 1.63 38.42 4.24
3622 4548 1.135746 GTGAGACTGATGCAAAGCAGC 60.136 52.381 12.73 0.00 45.81 5.25
3623 4549 1.128136 CGTGAGACTGATGCAAAGCAG 59.872 52.381 11.60 11.60 43.65 4.24
3624 4550 1.150827 CGTGAGACTGATGCAAAGCA 58.849 50.000 0.00 0.00 44.86 3.91
3625 4551 1.136141 CACGTGAGACTGATGCAAAGC 60.136 52.381 10.90 0.00 0.00 3.51
3626 4552 2.138320 ACACGTGAGACTGATGCAAAG 58.862 47.619 25.01 0.00 0.00 2.77
3627 4553 2.238942 ACACGTGAGACTGATGCAAA 57.761 45.000 25.01 0.00 0.00 3.68
3628 4554 2.135139 GAACACGTGAGACTGATGCAA 58.865 47.619 25.01 0.00 0.00 4.08
3629 4555 1.783284 GAACACGTGAGACTGATGCA 58.217 50.000 25.01 0.00 0.00 3.96
3630 4556 0.710567 CGAACACGTGAGACTGATGC 59.289 55.000 25.01 0.00 0.00 3.91
3631 4557 2.051879 ACGAACACGTGAGACTGATG 57.948 50.000 25.01 5.25 38.85 3.07
3632 4558 2.607282 GGAACGAACACGTGAGACTGAT 60.607 50.000 25.01 1.47 40.20 2.90
3633 4559 1.268896 GGAACGAACACGTGAGACTGA 60.269 52.381 25.01 0.00 40.20 3.41
3634 4560 1.129326 GGAACGAACACGTGAGACTG 58.871 55.000 25.01 9.36 40.20 3.51
3635 4561 0.031721 GGGAACGAACACGTGAGACT 59.968 55.000 25.01 3.01 40.20 3.24
3636 4562 0.031721 AGGGAACGAACACGTGAGAC 59.968 55.000 25.01 11.54 40.20 3.36
3637 4563 0.313043 GAGGGAACGAACACGTGAGA 59.687 55.000 25.01 0.00 40.20 3.27
3638 4564 1.002250 CGAGGGAACGAACACGTGAG 61.002 60.000 25.01 15.12 40.20 3.51
3639 4565 1.008194 CGAGGGAACGAACACGTGA 60.008 57.895 25.01 0.00 40.20 4.35
3640 4566 1.273455 GACGAGGGAACGAACACGTG 61.273 60.000 15.48 15.48 40.20 4.49
3641 4567 1.008079 GACGAGGGAACGAACACGT 60.008 57.895 0.00 0.00 42.17 4.49
3642 4568 1.002250 CAGACGAGGGAACGAACACG 61.002 60.000 0.00 0.00 37.03 4.49
3643 4569 0.313043 TCAGACGAGGGAACGAACAC 59.687 55.000 0.00 0.00 37.03 3.32
3653 4579 4.058124 TCAAAGACAACAATCAGACGAGG 58.942 43.478 0.00 0.00 0.00 4.63
3670 4596 8.103948 AGAGTAACTTCACCAATCAATCAAAG 57.896 34.615 0.00 0.00 0.00 2.77
3684 4610 8.974060 ATGGTAAAGAACAAAGAGTAACTTCA 57.026 30.769 0.00 0.00 37.93 3.02
3705 4631 8.042515 CCTATTTCCAAATCATTTGTCAATGGT 58.957 33.333 9.31 0.00 40.41 3.55
3711 4637 9.710900 AACTTTCCTATTTCCAAATCATTTGTC 57.289 29.630 9.31 0.00 38.98 3.18
3804 4745 0.613012 ATCCCTTTGCTTCACCAGGC 60.613 55.000 0.00 0.00 0.00 4.85
3856 4797 2.612212 GTTCACTTTGCTTCCTCGTTCA 59.388 45.455 0.00 0.00 0.00 3.18
3863 4804 2.291741 CCTGTCTGTTCACTTTGCTTCC 59.708 50.000 0.00 0.00 0.00 3.46
3866 4807 2.486191 CCTCCTGTCTGTTCACTTTGCT 60.486 50.000 0.00 0.00 0.00 3.91
3907 4848 7.501844 TCCAACCTTTCCATTTTATTTTCGTT 58.498 30.769 0.00 0.00 0.00 3.85
3920 5892 2.827322 CAAGATGCATCCAACCTTTCCA 59.173 45.455 23.06 0.00 0.00 3.53
3949 5921 5.942826 TGCAACAATGTCTACATCCACATTA 59.057 36.000 0.00 0.00 40.52 1.90
4016 5988 6.381481 TTGCTTTGCATGATCTGGTAATAG 57.619 37.500 0.00 0.00 38.76 1.73
4017 5989 6.405731 GGTTTGCTTTGCATGATCTGGTAATA 60.406 38.462 0.00 0.00 38.76 0.98
4028 6000 3.059166 GGTAACAGGTTTGCTTTGCATG 58.941 45.455 0.00 0.00 38.76 4.06
4049 6021 1.888512 CATTGGTTTGGACCCAGACAG 59.111 52.381 11.19 0.00 45.92 3.51
4061 6033 3.202906 CGATGGGACGTATCATTGGTTT 58.797 45.455 9.01 0.00 0.00 3.27
4068 6040 1.826096 TGGAAACGATGGGACGTATCA 59.174 47.619 0.00 0.00 45.83 2.15
4071 6043 0.967662 TGTGGAAACGATGGGACGTA 59.032 50.000 0.00 0.00 45.83 3.57
4079 6051 4.485163 GCTTTTGCTAATGTGGAAACGAT 58.515 39.130 0.00 0.00 43.35 3.73
4144 6116 5.834742 TGCAAATGGTCCTGCATATAAAGAT 59.165 36.000 0.23 0.00 43.44 2.40
4171 6145 3.005554 CAAATGGCGTCTGTGAGATTCT 58.994 45.455 0.00 0.00 0.00 2.40
4179 6153 1.671054 CCGACCAAATGGCGTCTGT 60.671 57.895 12.79 0.00 39.32 3.41
4181 6155 2.046314 CCCGACCAAATGGCGTCT 60.046 61.111 12.79 0.00 39.32 4.18
4205 6179 3.577313 GAGATTTGAGGGCCGCGC 61.577 66.667 0.00 0.00 0.00 6.86
4227 6201 1.621107 TCCGTCGTAAAAGCGTGATC 58.379 50.000 0.00 0.00 0.00 2.92
4241 6215 4.932268 TGATGTTCGGTTTTATTCCGTC 57.068 40.909 4.36 1.10 46.86 4.79
4249 6223 2.622942 AGCACACATGATGTTCGGTTTT 59.377 40.909 0.00 0.00 40.64 2.43
4254 6228 2.604914 GGAGTAGCACACATGATGTTCG 59.395 50.000 0.00 0.00 40.64 3.95
4258 6232 3.257469 ACAGGAGTAGCACACATGATG 57.743 47.619 0.00 0.00 0.00 3.07
4303 6277 3.570559 ACCAATATTTGTTTGCCGTTCG 58.429 40.909 0.00 0.00 0.00 3.95
4308 6282 3.615056 GCCGTAACCAATATTTGTTTGCC 59.385 43.478 9.92 0.02 0.00 4.52
4370 6344 7.393216 AGATCAATTCTTACTGTTTCAGAGCT 58.607 34.615 3.70 0.00 35.18 4.09
4373 6347 9.424319 GTGTAGATCAATTCTTACTGTTTCAGA 57.576 33.333 3.70 0.00 35.79 3.27
4376 6350 7.063544 AGCGTGTAGATCAATTCTTACTGTTTC 59.936 37.037 0.00 0.00 35.79 2.78


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.