Multiple sequence alignment - TraesCS1D01G402700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G402700 chr1D 100.000 3425 0 0 1 3425 467794710 467791286 0.000000e+00 6325.0
1 TraesCS1D01G402700 chr1D 97.291 406 11 0 1 406 60265477 60265072 0.000000e+00 689.0
2 TraesCS1D01G402700 chr1D 96.594 411 14 0 1 411 20939265 20939675 0.000000e+00 682.0
3 TraesCS1D01G402700 chr1D 90.179 224 21 1 1596 1818 467792935 467792712 1.200000e-74 291.0
4 TraesCS1D01G402700 chr1D 90.179 224 21 1 1776 1999 467793115 467792893 1.200000e-74 291.0
5 TraesCS1D01G402700 chr1D 81.443 97 15 3 2341 2434 467817982 467817886 3.670000e-10 76.8
6 TraesCS1D01G402700 chr1D 90.909 55 5 0 2077 2131 467812073 467812019 1.320000e-09 75.0
7 TraesCS1D01G402700 chr1A 93.374 1313 63 7 1776 3068 560196665 560197973 0.000000e+00 1921.0
8 TraesCS1D01G402700 chr1A 90.167 1017 63 16 819 1818 560195891 560196887 0.000000e+00 1290.0
9 TraesCS1D01G402700 chr1A 97.333 225 6 0 3071 3295 560201055 560201279 1.930000e-102 383.0
10 TraesCS1D01G402700 chr1A 85.924 341 34 8 2896 3225 560239729 560240066 5.440000e-93 351.0
11 TraesCS1D01G402700 chr1B 92.843 978 41 14 2163 3114 645703351 645702377 0.000000e+00 1391.0
12 TraesCS1D01G402700 chr1B 89.783 460 26 6 406 858 645704985 645704540 1.380000e-158 569.0
13 TraesCS1D01G402700 chr1B 91.135 282 13 6 2063 2344 645703863 645703594 4.170000e-99 372.0
14 TraesCS1D01G402700 chr1B 86.136 339 33 8 2898 3225 645671856 645671521 1.510000e-93 353.0
15 TraesCS1D01G402700 chr1B 90.551 254 20 3 3175 3425 645702394 645702142 1.970000e-87 333.0
16 TraesCS1D01G402700 chr1B 93.902 82 2 1 2263 2344 645703377 645703299 1.670000e-23 121.0
17 TraesCS1D01G402700 chr1B 97.101 69 2 0 2152 2220 645703657 645703589 2.160000e-22 117.0
18 TraesCS1D01G402700 chr1B 86.170 94 10 1 2072 2162 645763934 645763841 7.820000e-17 99.0
19 TraesCS1D01G402700 chr5D 97.291 406 11 0 1 406 476507718 476508123 0.000000e+00 689.0
20 TraesCS1D01G402700 chr5D 96.386 415 14 1 1 415 476516399 476516812 0.000000e+00 682.0
21 TraesCS1D01G402700 chr3D 97.291 406 11 0 1 406 598303733 598303328 0.000000e+00 689.0
22 TraesCS1D01G402700 chr3D 96.829 410 13 0 1 410 48997541 48997950 0.000000e+00 686.0
23 TraesCS1D01G402700 chr4D 96.829 410 13 0 1 410 414188877 414188468 0.000000e+00 686.0
24 TraesCS1D01G402700 chr4D 96.610 413 14 0 1 413 454199653 454199241 0.000000e+00 686.0
25 TraesCS1D01G402700 chr2D 95.714 420 18 0 1 420 79961446 79961865 0.000000e+00 676.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G402700 chr1D 467791286 467794710 3424 True 2302.333333 6325 93.452667 1 3425 3 chr1D.!!$R4 3424
1 TraesCS1D01G402700 chr1A 560195891 560201279 5388 False 1198.000000 1921 93.624667 819 3295 3 chr1A.!!$F2 2476
2 TraesCS1D01G402700 chr1B 645702142 645704985 2843 True 483.833333 1391 92.552500 406 3425 6 chr1B.!!$R3 3019

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
87 88 0.029035 CTACTACTACGTGCAGCCCG 59.971 60.0 0.00 0.00 0.00 6.13 F
156 157 0.030908 CCTCGTTCGATCTGTAGCCC 59.969 60.0 0.00 0.00 0.00 5.19 F
170 171 0.035439 TAGCCCAGTTTGTGCTAGCC 60.035 55.0 13.29 4.15 36.57 3.93 F
347 348 0.041238 ATCTTCCCGTGAGTCCCTGA 59.959 55.0 0.00 0.00 0.00 3.86 F
348 349 0.041238 TCTTCCCGTGAGTCCCTGAT 59.959 55.0 0.00 0.00 0.00 2.90 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1976 2106 0.039035 TTGGCCGGCTTTACCATCTT 59.961 50.000 28.56 0.0 39.03 2.40 R
2144 2274 0.175760 GTCATCCTGCACGCCTTCTA 59.824 55.000 0.00 0.0 0.00 2.10 R
2195 2325 1.133730 GGTCACCACAAACCCTGGTAA 60.134 52.381 0.00 0.0 40.25 2.85 R
2339 2882 0.718343 AGCGTCGTCGTAGTAGTCAC 59.282 55.000 3.66 0.0 39.49 3.67 R
2525 3068 4.794246 CGAAGCTAGCTACGATAATTAGGC 59.206 45.833 19.70 0.0 0.00 3.93 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 2.687700 CAGATGTTGGAGTCCAGGAG 57.312 55.000 12.67 0.00 33.81 3.69
24 25 0.908198 AGATGTTGGAGTCCAGGAGC 59.092 55.000 12.67 5.82 33.81 4.70
25 26 0.107459 GATGTTGGAGTCCAGGAGCC 60.107 60.000 12.67 0.00 33.81 4.70
26 27 0.842030 ATGTTGGAGTCCAGGAGCCA 60.842 55.000 12.67 6.85 33.81 4.75
27 28 1.298014 GTTGGAGTCCAGGAGCCAG 59.702 63.158 12.67 0.00 33.81 4.85
28 29 1.158466 TTGGAGTCCAGGAGCCAGA 59.842 57.895 12.67 0.00 33.81 3.86
29 30 1.194781 TTGGAGTCCAGGAGCCAGAC 61.195 60.000 12.67 0.00 33.81 3.51
30 31 2.716017 GGAGTCCAGGAGCCAGACG 61.716 68.421 3.60 0.00 35.65 4.18
31 32 3.363844 GAGTCCAGGAGCCAGACGC 62.364 68.421 0.00 0.00 35.65 5.19
32 33 4.459089 GTCCAGGAGCCAGACGCC 62.459 72.222 0.00 0.00 38.78 5.68
34 35 4.767255 CCAGGAGCCAGACGCCAC 62.767 72.222 0.00 0.00 41.55 5.01
35 36 4.767255 CAGGAGCCAGACGCCACC 62.767 72.222 0.00 0.00 41.55 4.61
46 47 4.986587 CGCCACCGTCGACGACAA 62.987 66.667 37.65 0.00 43.02 3.18
47 48 3.400590 GCCACCGTCGACGACAAC 61.401 66.667 37.65 20.36 43.02 3.32
48 49 2.333938 CCACCGTCGACGACAACT 59.666 61.111 37.65 12.30 43.02 3.16
49 50 1.728426 CCACCGTCGACGACAACTC 60.728 63.158 37.65 0.45 43.02 3.01
50 51 1.728426 CACCGTCGACGACAACTCC 60.728 63.158 37.65 0.00 43.02 3.85
51 52 1.895707 ACCGTCGACGACAACTCCT 60.896 57.895 37.65 7.43 43.02 3.69
52 53 0.603707 ACCGTCGACGACAACTCCTA 60.604 55.000 37.65 0.00 43.02 2.94
53 54 0.179205 CCGTCGACGACAACTCCTAC 60.179 60.000 37.65 0.00 43.02 3.18
54 55 0.517946 CGTCGACGACAACTCCTACG 60.518 60.000 33.35 7.14 43.02 3.51
55 56 0.179205 GTCGACGACAACTCCTACGG 60.179 60.000 22.66 0.00 32.09 4.02
56 57 1.513586 CGACGACAACTCCTACGGC 60.514 63.158 0.00 0.00 0.00 5.68
57 58 1.582968 GACGACAACTCCTACGGCA 59.417 57.895 0.00 0.00 33.73 5.69
58 59 0.731855 GACGACAACTCCTACGGCAC 60.732 60.000 0.00 0.00 33.73 5.01
59 60 1.177256 ACGACAACTCCTACGGCACT 61.177 55.000 0.00 0.00 0.00 4.40
60 61 0.732880 CGACAACTCCTACGGCACTG 60.733 60.000 0.00 0.00 0.00 3.66
61 62 0.389948 GACAACTCCTACGGCACTGG 60.390 60.000 0.00 0.00 0.00 4.00
62 63 0.830444 ACAACTCCTACGGCACTGGA 60.830 55.000 0.00 0.00 0.00 3.86
64 65 3.211288 CTCCTACGGCACTGGAGG 58.789 66.667 0.73 0.73 42.55 4.30
65 66 1.379977 CTCCTACGGCACTGGAGGA 60.380 63.158 10.13 10.13 42.55 3.71
66 67 1.379977 TCCTACGGCACTGGAGGAG 60.380 63.158 6.32 0.00 33.05 3.69
67 68 2.496817 CTACGGCACTGGAGGAGC 59.503 66.667 0.00 0.00 0.00 4.70
68 69 3.075005 TACGGCACTGGAGGAGCC 61.075 66.667 0.00 0.00 44.89 4.70
69 70 3.602075 TACGGCACTGGAGGAGCCT 62.602 63.158 9.75 0.00 46.14 4.58
70 71 2.219449 TACGGCACTGGAGGAGCCTA 62.219 60.000 9.75 1.41 46.14 3.93
71 72 2.904131 GGCACTGGAGGAGCCTAC 59.096 66.667 0.00 0.00 44.92 3.18
72 73 1.687493 GGCACTGGAGGAGCCTACT 60.687 63.158 0.00 0.00 44.92 2.57
73 74 0.397254 GGCACTGGAGGAGCCTACTA 60.397 60.000 0.00 0.00 44.92 1.82
74 75 0.747852 GCACTGGAGGAGCCTACTAC 59.252 60.000 0.00 0.00 37.63 2.73
75 76 1.686741 GCACTGGAGGAGCCTACTACT 60.687 57.143 0.00 0.00 41.07 2.57
76 77 2.423088 GCACTGGAGGAGCCTACTACTA 60.423 54.545 0.00 0.00 37.13 1.82
77 78 3.215975 CACTGGAGGAGCCTACTACTAC 58.784 54.545 0.00 0.00 37.13 2.73
78 79 2.158784 ACTGGAGGAGCCTACTACTACG 60.159 54.545 0.00 0.00 41.28 3.51
79 80 1.842562 TGGAGGAGCCTACTACTACGT 59.157 52.381 0.00 0.00 41.28 3.57
80 81 2.220313 GGAGGAGCCTACTACTACGTG 58.780 57.143 0.00 0.00 37.13 4.49
81 82 1.603326 GAGGAGCCTACTACTACGTGC 59.397 57.143 0.00 0.00 37.13 5.34
82 83 1.064906 AGGAGCCTACTACTACGTGCA 60.065 52.381 0.00 0.00 34.24 4.57
83 84 1.334243 GGAGCCTACTACTACGTGCAG 59.666 57.143 0.00 0.00 0.00 4.41
84 85 0.739561 AGCCTACTACTACGTGCAGC 59.260 55.000 0.00 0.00 0.00 5.25
85 86 0.248949 GCCTACTACTACGTGCAGCC 60.249 60.000 0.00 0.00 0.00 4.85
86 87 0.384669 CCTACTACTACGTGCAGCCC 59.615 60.000 0.00 0.00 0.00 5.19
87 88 0.029035 CTACTACTACGTGCAGCCCG 59.971 60.000 0.00 0.00 0.00 6.13
88 89 1.996786 TACTACTACGTGCAGCCCGC 61.997 60.000 0.00 0.00 42.89 6.13
89 90 3.064987 CTACTACGTGCAGCCCGCT 62.065 63.158 0.00 0.00 43.06 5.52
90 91 3.350909 TACTACGTGCAGCCCGCTG 62.351 63.158 12.41 12.41 46.15 5.18
91 92 4.435436 CTACGTGCAGCCCGCTGA 62.435 66.667 20.62 3.04 46.30 4.26
92 93 4.735132 TACGTGCAGCCCGCTGAC 62.735 66.667 20.62 13.40 46.30 3.51
97 98 4.819761 GCAGCCCGCTGACGATGA 62.820 66.667 20.62 0.00 46.30 2.92
98 99 2.887568 CAGCCCGCTGACGATGAC 60.888 66.667 11.32 0.00 46.30 3.06
99 100 4.148825 AGCCCGCTGACGATGACC 62.149 66.667 0.00 0.00 43.93 4.02
100 101 4.451150 GCCCGCTGACGATGACCA 62.451 66.667 0.00 0.00 43.93 4.02
101 102 2.202797 CCCGCTGACGATGACCAG 60.203 66.667 0.00 0.00 43.93 4.00
102 103 2.202797 CCGCTGACGATGACCAGG 60.203 66.667 0.00 0.00 43.93 4.45
103 104 2.710902 CCGCTGACGATGACCAGGA 61.711 63.158 0.00 0.00 43.93 3.86
104 105 1.226802 CGCTGACGATGACCAGGAG 60.227 63.158 0.00 0.00 43.93 3.69
105 106 1.893786 GCTGACGATGACCAGGAGT 59.106 57.895 0.00 0.00 0.00 3.85
106 107 1.103803 GCTGACGATGACCAGGAGTA 58.896 55.000 0.00 0.00 0.00 2.59
107 108 1.066303 GCTGACGATGACCAGGAGTAG 59.934 57.143 0.00 0.00 0.00 2.57
108 109 2.370349 CTGACGATGACCAGGAGTAGT 58.630 52.381 0.00 0.00 0.00 2.73
109 110 2.755655 CTGACGATGACCAGGAGTAGTT 59.244 50.000 0.00 0.00 0.00 2.24
110 111 3.162666 TGACGATGACCAGGAGTAGTTT 58.837 45.455 0.00 0.00 0.00 2.66
111 112 3.056821 TGACGATGACCAGGAGTAGTTTG 60.057 47.826 0.00 0.00 0.00 2.93
112 113 2.233922 ACGATGACCAGGAGTAGTTTGG 59.766 50.000 0.00 1.57 37.98 3.28
113 114 2.496070 CGATGACCAGGAGTAGTTTGGA 59.504 50.000 8.57 0.00 35.89 3.53
114 115 3.429547 CGATGACCAGGAGTAGTTTGGAG 60.430 52.174 8.57 0.00 35.89 3.86
115 116 2.257207 TGACCAGGAGTAGTTTGGAGG 58.743 52.381 8.57 0.00 35.89 4.30
116 117 2.158219 TGACCAGGAGTAGTTTGGAGGA 60.158 50.000 8.57 0.00 35.89 3.71
117 118 2.498078 GACCAGGAGTAGTTTGGAGGAG 59.502 54.545 8.57 0.00 35.89 3.69
118 119 1.208293 CCAGGAGTAGTTTGGAGGAGC 59.792 57.143 0.00 0.00 33.76 4.70
119 120 1.208293 CAGGAGTAGTTTGGAGGAGCC 59.792 57.143 0.00 0.00 37.10 4.70
120 121 0.542333 GGAGTAGTTTGGAGGAGCCC 59.458 60.000 0.00 0.00 34.97 5.19
121 122 1.276622 GAGTAGTTTGGAGGAGCCCA 58.723 55.000 0.00 0.00 34.97 5.36
122 123 1.208293 GAGTAGTTTGGAGGAGCCCAG 59.792 57.143 0.00 0.00 37.53 4.45
123 124 0.253327 GTAGTTTGGAGGAGCCCAGG 59.747 60.000 0.00 0.00 37.53 4.45
124 125 1.562672 TAGTTTGGAGGAGCCCAGGC 61.563 60.000 0.00 0.00 37.53 4.85
125 126 2.858476 TTTGGAGGAGCCCAGGCA 60.858 61.111 12.03 0.00 44.88 4.75
126 127 2.910737 TTTGGAGGAGCCCAGGCAG 61.911 63.158 12.03 0.00 44.88 4.85
129 130 3.478274 GAGGAGCCCAGGCAGGAG 61.478 72.222 12.03 0.00 44.88 3.69
148 149 2.956964 CCTGCGCCTCGTTCGATC 60.957 66.667 4.18 0.00 0.00 3.69
149 150 2.103143 CTGCGCCTCGTTCGATCT 59.897 61.111 4.18 0.00 0.00 2.75
150 151 2.202610 TGCGCCTCGTTCGATCTG 60.203 61.111 4.18 0.00 0.00 2.90
151 152 2.202623 GCGCCTCGTTCGATCTGT 60.203 61.111 0.00 0.00 0.00 3.41
152 153 1.063649 GCGCCTCGTTCGATCTGTA 59.936 57.895 0.00 0.00 0.00 2.74
153 154 0.930742 GCGCCTCGTTCGATCTGTAG 60.931 60.000 0.00 0.00 0.00 2.74
154 155 0.930742 CGCCTCGTTCGATCTGTAGC 60.931 60.000 0.00 0.00 0.00 3.58
155 156 0.595310 GCCTCGTTCGATCTGTAGCC 60.595 60.000 0.00 0.00 0.00 3.93
156 157 0.030908 CCTCGTTCGATCTGTAGCCC 59.969 60.000 0.00 0.00 0.00 5.19
157 158 0.738975 CTCGTTCGATCTGTAGCCCA 59.261 55.000 0.00 0.00 0.00 5.36
158 159 0.738975 TCGTTCGATCTGTAGCCCAG 59.261 55.000 0.00 0.00 42.97 4.45
159 160 0.456221 CGTTCGATCTGTAGCCCAGT 59.544 55.000 1.34 0.00 42.19 4.00
160 161 1.135083 CGTTCGATCTGTAGCCCAGTT 60.135 52.381 1.34 0.00 42.19 3.16
161 162 2.674177 CGTTCGATCTGTAGCCCAGTTT 60.674 50.000 1.34 0.00 42.19 2.66
162 163 2.672961 TCGATCTGTAGCCCAGTTTG 57.327 50.000 1.34 0.00 42.19 2.93
163 164 1.899814 TCGATCTGTAGCCCAGTTTGT 59.100 47.619 1.34 0.00 42.19 2.83
164 165 2.002586 CGATCTGTAGCCCAGTTTGTG 58.997 52.381 1.34 0.00 42.19 3.33
165 166 1.740025 GATCTGTAGCCCAGTTTGTGC 59.260 52.381 1.34 0.00 42.19 4.57
166 167 0.764890 TCTGTAGCCCAGTTTGTGCT 59.235 50.000 1.34 0.00 42.19 4.40
167 168 1.974957 TCTGTAGCCCAGTTTGTGCTA 59.025 47.619 1.34 0.00 42.19 3.49
168 169 2.028112 TCTGTAGCCCAGTTTGTGCTAG 60.028 50.000 1.34 0.00 42.19 3.42
169 170 1.087501 GTAGCCCAGTTTGTGCTAGC 58.912 55.000 8.10 8.10 38.20 3.42
170 171 0.035439 TAGCCCAGTTTGTGCTAGCC 60.035 55.000 13.29 4.15 36.57 3.93
171 172 1.303643 GCCCAGTTTGTGCTAGCCT 60.304 57.895 13.29 0.00 0.00 4.58
172 173 0.895559 GCCCAGTTTGTGCTAGCCTT 60.896 55.000 13.29 0.00 0.00 4.35
173 174 1.168714 CCCAGTTTGTGCTAGCCTTC 58.831 55.000 13.29 3.48 0.00 3.46
174 175 1.271597 CCCAGTTTGTGCTAGCCTTCT 60.272 52.381 13.29 0.83 0.00 2.85
175 176 2.508526 CCAGTTTGTGCTAGCCTTCTT 58.491 47.619 13.29 0.00 0.00 2.52
176 177 3.559171 CCCAGTTTGTGCTAGCCTTCTTA 60.559 47.826 13.29 0.00 0.00 2.10
177 178 4.072131 CCAGTTTGTGCTAGCCTTCTTAA 58.928 43.478 13.29 0.00 0.00 1.85
178 179 4.154918 CCAGTTTGTGCTAGCCTTCTTAAG 59.845 45.833 13.29 0.00 0.00 1.85
193 194 7.694388 CCTTCTTAAGGCAAACTTGTTTAAC 57.306 36.000 1.85 0.00 42.78 2.01
194 195 7.489160 CCTTCTTAAGGCAAACTTGTTTAACT 58.511 34.615 1.85 0.00 42.78 2.24
195 196 7.979537 CCTTCTTAAGGCAAACTTGTTTAACTT 59.020 33.333 1.85 14.41 42.78 2.66
198 199 9.959749 TCTTAAGGCAAACTTGTTTAACTTATG 57.040 29.630 15.68 16.48 40.37 1.90
199 200 9.744468 CTTAAGGCAAACTTGTTTAACTTATGT 57.256 29.630 15.68 0.00 40.37 2.29
200 201 9.738832 TTAAGGCAAACTTGTTTAACTTATGTC 57.261 29.630 15.68 1.30 40.37 3.06
201 202 7.582667 AGGCAAACTTGTTTAACTTATGTCT 57.417 32.000 0.00 0.00 0.00 3.41
202 203 7.425606 AGGCAAACTTGTTTAACTTATGTCTG 58.574 34.615 0.00 0.00 0.00 3.51
203 204 7.068226 AGGCAAACTTGTTTAACTTATGTCTGT 59.932 33.333 0.00 0.00 0.00 3.41
204 205 8.347035 GGCAAACTTGTTTAACTTATGTCTGTA 58.653 33.333 0.00 0.00 0.00 2.74
205 206 9.166126 GCAAACTTGTTTAACTTATGTCTGTAC 57.834 33.333 0.00 0.00 0.00 2.90
208 209 9.826574 AACTTGTTTAACTTATGTCTGTACTCA 57.173 29.630 0.00 0.00 0.00 3.41
209 210 9.477484 ACTTGTTTAACTTATGTCTGTACTCAG 57.523 33.333 0.00 0.00 42.54 3.35
210 211 9.692749 CTTGTTTAACTTATGTCTGTACTCAGA 57.307 33.333 0.00 0.00 46.85 3.27
220 221 4.607293 TCTGTACTCAGATGTTGTTGCT 57.393 40.909 0.00 0.00 44.58 3.91
221 222 4.960938 TCTGTACTCAGATGTTGTTGCTT 58.039 39.130 0.00 0.00 44.58 3.91
222 223 4.991056 TCTGTACTCAGATGTTGTTGCTTC 59.009 41.667 0.00 0.00 44.58 3.86
223 224 4.065088 TGTACTCAGATGTTGTTGCTTCC 58.935 43.478 0.00 0.00 0.00 3.46
224 225 2.146342 ACTCAGATGTTGTTGCTTCCG 58.854 47.619 0.00 0.00 0.00 4.30
225 226 0.874390 TCAGATGTTGTTGCTTCCGC 59.126 50.000 0.00 0.00 0.00 5.54
226 227 0.877071 CAGATGTTGTTGCTTCCGCT 59.123 50.000 0.00 0.00 36.97 5.52
227 228 0.877071 AGATGTTGTTGCTTCCGCTG 59.123 50.000 0.00 0.00 36.97 5.18
228 229 0.874390 GATGTTGTTGCTTCCGCTGA 59.126 50.000 0.00 0.00 36.97 4.26
229 230 0.593128 ATGTTGTTGCTTCCGCTGAC 59.407 50.000 0.00 0.00 36.97 3.51
230 231 0.463654 TGTTGTTGCTTCCGCTGACT 60.464 50.000 0.00 0.00 36.97 3.41
231 232 0.235926 GTTGTTGCTTCCGCTGACTC 59.764 55.000 0.00 0.00 36.97 3.36
232 233 1.221466 TTGTTGCTTCCGCTGACTCG 61.221 55.000 0.00 0.00 36.97 4.18
233 234 1.664965 GTTGCTTCCGCTGACTCGT 60.665 57.895 0.00 0.00 36.97 4.18
234 235 1.372997 TTGCTTCCGCTGACTCGTC 60.373 57.895 0.00 0.00 36.97 4.20
235 236 1.806461 TTGCTTCCGCTGACTCGTCT 61.806 55.000 0.00 0.00 36.97 4.18
236 237 0.958876 TGCTTCCGCTGACTCGTCTA 60.959 55.000 0.00 0.00 36.97 2.59
237 238 0.382515 GCTTCCGCTGACTCGTCTAT 59.617 55.000 0.00 0.00 0.00 1.98
238 239 1.862008 GCTTCCGCTGACTCGTCTATG 60.862 57.143 0.00 0.00 0.00 2.23
239 240 1.671328 CTTCCGCTGACTCGTCTATGA 59.329 52.381 0.00 0.00 0.00 2.15
240 241 1.968704 TCCGCTGACTCGTCTATGAT 58.031 50.000 0.00 0.00 0.00 2.45
241 242 1.874231 TCCGCTGACTCGTCTATGATC 59.126 52.381 0.00 0.00 0.00 2.92
242 243 1.399087 CCGCTGACTCGTCTATGATCG 60.399 57.143 0.00 0.00 0.00 3.69
243 244 1.527311 CGCTGACTCGTCTATGATCGA 59.473 52.381 0.00 0.00 34.88 3.59
249 250 3.617540 CTCGTCTATGATCGAGCACTT 57.382 47.619 5.03 0.00 44.82 3.16
250 251 3.295785 CTCGTCTATGATCGAGCACTTG 58.704 50.000 5.03 0.00 44.82 3.16
251 252 2.683362 TCGTCTATGATCGAGCACTTGT 59.317 45.455 5.03 0.00 0.00 3.16
252 253 3.875134 TCGTCTATGATCGAGCACTTGTA 59.125 43.478 5.03 0.00 0.00 2.41
253 254 4.515567 TCGTCTATGATCGAGCACTTGTAT 59.484 41.667 5.03 0.00 0.00 2.29
254 255 5.008712 TCGTCTATGATCGAGCACTTGTATT 59.991 40.000 5.03 0.00 0.00 1.89
255 256 5.340932 CGTCTATGATCGAGCACTTGTATTC 59.659 44.000 5.03 0.00 0.00 1.75
256 257 5.340932 GTCTATGATCGAGCACTTGTATTCG 59.659 44.000 5.03 0.00 34.56 3.34
257 258 3.775661 TGATCGAGCACTTGTATTCGA 57.224 42.857 0.00 9.86 44.88 3.71
258 259 3.695816 TGATCGAGCACTTGTATTCGAG 58.304 45.455 0.00 0.00 44.14 4.04
259 260 1.909376 TCGAGCACTTGTATTCGAGC 58.091 50.000 5.19 0.00 37.18 5.03
260 261 0.924090 CGAGCACTTGTATTCGAGCC 59.076 55.000 0.00 0.00 35.19 4.70
261 262 1.291132 GAGCACTTGTATTCGAGCCC 58.709 55.000 0.00 0.00 0.00 5.19
262 263 0.905357 AGCACTTGTATTCGAGCCCT 59.095 50.000 0.00 0.00 0.00 5.19
263 264 1.134670 AGCACTTGTATTCGAGCCCTC 60.135 52.381 0.00 0.00 0.00 4.30
286 287 2.656947 GCCCCTGGCTTGTATTATGA 57.343 50.000 0.00 0.00 46.69 2.15
287 288 3.160679 GCCCCTGGCTTGTATTATGAT 57.839 47.619 0.00 0.00 46.69 2.45
288 289 2.821969 GCCCCTGGCTTGTATTATGATG 59.178 50.000 0.00 0.00 46.69 3.07
289 290 2.821969 CCCCTGGCTTGTATTATGATGC 59.178 50.000 0.00 0.00 0.00 3.91
290 291 3.499202 CCCCTGGCTTGTATTATGATGCT 60.499 47.826 0.00 0.00 0.00 3.79
291 292 3.504906 CCCTGGCTTGTATTATGATGCTG 59.495 47.826 0.00 0.00 0.00 4.41
292 293 3.504906 CCTGGCTTGTATTATGATGCTGG 59.495 47.826 0.00 0.00 0.00 4.85
293 294 4.139786 CTGGCTTGTATTATGATGCTGGT 58.860 43.478 0.00 0.00 0.00 4.00
294 295 5.303259 TGGCTTGTATTATGATGCTGGTA 57.697 39.130 0.00 0.00 0.00 3.25
295 296 5.879763 TGGCTTGTATTATGATGCTGGTAT 58.120 37.500 0.00 0.00 0.00 2.73
296 297 5.706833 TGGCTTGTATTATGATGCTGGTATG 59.293 40.000 0.00 0.00 0.00 2.39
297 298 5.939883 GGCTTGTATTATGATGCTGGTATGA 59.060 40.000 0.00 0.00 0.00 2.15
298 299 6.128172 GGCTTGTATTATGATGCTGGTATGAC 60.128 42.308 0.00 0.00 0.00 3.06
299 300 6.652481 GCTTGTATTATGATGCTGGTATGACT 59.348 38.462 0.00 0.00 0.00 3.41
300 301 7.173907 GCTTGTATTATGATGCTGGTATGACTT 59.826 37.037 0.00 0.00 0.00 3.01
301 302 9.710900 CTTGTATTATGATGCTGGTATGACTTA 57.289 33.333 0.00 0.00 0.00 2.24
309 310 8.978874 TGATGCTGGTATGACTTATTTATGTT 57.021 30.769 0.00 0.00 0.00 2.71
310 311 9.407380 TGATGCTGGTATGACTTATTTATGTTT 57.593 29.630 0.00 0.00 0.00 2.83
331 332 8.902540 TGTTTTAGAGTTGTGTTGTGATATCT 57.097 30.769 3.98 0.00 0.00 1.98
332 333 9.337396 TGTTTTAGAGTTGTGTTGTGATATCTT 57.663 29.630 3.98 0.00 0.00 2.40
333 334 9.813080 GTTTTAGAGTTGTGTTGTGATATCTTC 57.187 33.333 3.98 0.00 0.00 2.87
334 335 8.547967 TTTAGAGTTGTGTTGTGATATCTTCC 57.452 34.615 3.98 0.00 0.00 3.46
335 336 5.491982 AGAGTTGTGTTGTGATATCTTCCC 58.508 41.667 3.98 0.00 0.00 3.97
336 337 4.253685 AGTTGTGTTGTGATATCTTCCCG 58.746 43.478 3.98 0.00 0.00 5.14
337 338 3.973206 TGTGTTGTGATATCTTCCCGT 57.027 42.857 3.98 0.00 0.00 5.28
338 339 3.595173 TGTGTTGTGATATCTTCCCGTG 58.405 45.455 3.98 0.00 0.00 4.94
339 340 3.259625 TGTGTTGTGATATCTTCCCGTGA 59.740 43.478 3.98 0.00 0.00 4.35
340 341 3.865745 GTGTTGTGATATCTTCCCGTGAG 59.134 47.826 3.98 0.00 0.00 3.51
341 342 3.513912 TGTTGTGATATCTTCCCGTGAGT 59.486 43.478 3.98 0.00 0.00 3.41
342 343 4.113354 GTTGTGATATCTTCCCGTGAGTC 58.887 47.826 3.98 0.00 0.00 3.36
343 344 2.693591 TGTGATATCTTCCCGTGAGTCC 59.306 50.000 3.98 0.00 0.00 3.85
344 345 2.036089 GTGATATCTTCCCGTGAGTCCC 59.964 54.545 3.98 0.00 0.00 4.46
345 346 2.091278 TGATATCTTCCCGTGAGTCCCT 60.091 50.000 3.98 0.00 0.00 4.20
346 347 1.776662 TATCTTCCCGTGAGTCCCTG 58.223 55.000 0.00 0.00 0.00 4.45
347 348 0.041238 ATCTTCCCGTGAGTCCCTGA 59.959 55.000 0.00 0.00 0.00 3.86
348 349 0.041238 TCTTCCCGTGAGTCCCTGAT 59.959 55.000 0.00 0.00 0.00 2.90
349 350 0.461961 CTTCCCGTGAGTCCCTGATC 59.538 60.000 0.00 0.00 0.00 2.92
350 351 0.041238 TTCCCGTGAGTCCCTGATCT 59.959 55.000 0.00 0.00 0.00 2.75
351 352 0.041238 TCCCGTGAGTCCCTGATCTT 59.959 55.000 0.00 0.00 0.00 2.40
352 353 0.176680 CCCGTGAGTCCCTGATCTTG 59.823 60.000 0.00 0.00 0.00 3.02
353 354 1.186200 CCGTGAGTCCCTGATCTTGA 58.814 55.000 0.00 0.00 0.00 3.02
354 355 1.759445 CCGTGAGTCCCTGATCTTGAT 59.241 52.381 0.00 0.00 0.00 2.57
355 356 2.223923 CCGTGAGTCCCTGATCTTGATC 60.224 54.545 3.82 3.82 0.00 2.92
356 357 2.542618 CGTGAGTCCCTGATCTTGATCG 60.543 54.545 6.19 2.03 0.00 3.69
357 358 2.428890 GTGAGTCCCTGATCTTGATCGT 59.571 50.000 6.19 0.00 0.00 3.73
358 359 3.632604 GTGAGTCCCTGATCTTGATCGTA 59.367 47.826 6.19 0.00 0.00 3.43
359 360 3.632604 TGAGTCCCTGATCTTGATCGTAC 59.367 47.826 6.19 2.53 0.00 3.67
360 361 3.886505 GAGTCCCTGATCTTGATCGTACT 59.113 47.826 6.19 6.45 0.00 2.73
361 362 3.886505 AGTCCCTGATCTTGATCGTACTC 59.113 47.826 6.19 0.00 0.00 2.59
362 363 3.632604 GTCCCTGATCTTGATCGTACTCA 59.367 47.826 6.19 0.00 0.00 3.41
363 364 4.279671 GTCCCTGATCTTGATCGTACTCAT 59.720 45.833 6.19 0.00 0.00 2.90
364 365 4.895889 TCCCTGATCTTGATCGTACTCATT 59.104 41.667 6.19 0.00 0.00 2.57
365 366 5.363868 TCCCTGATCTTGATCGTACTCATTT 59.636 40.000 6.19 0.00 0.00 2.32
366 367 5.464722 CCCTGATCTTGATCGTACTCATTTG 59.535 44.000 6.19 0.00 0.00 2.32
367 368 5.050499 CCTGATCTTGATCGTACTCATTTGC 60.050 44.000 6.19 0.00 0.00 3.68
368 369 4.504097 TGATCTTGATCGTACTCATTTGCG 59.496 41.667 6.19 0.00 0.00 4.85
369 370 3.845178 TCTTGATCGTACTCATTTGCGT 58.155 40.909 0.00 0.00 0.00 5.24
370 371 3.612423 TCTTGATCGTACTCATTTGCGTG 59.388 43.478 0.00 0.00 0.00 5.34
371 372 1.658596 TGATCGTACTCATTTGCGTGC 59.341 47.619 0.00 0.00 0.00 5.34
372 373 1.658596 GATCGTACTCATTTGCGTGCA 59.341 47.619 0.00 0.00 0.00 4.57
373 374 1.720805 TCGTACTCATTTGCGTGCAT 58.279 45.000 0.00 0.00 0.00 3.96
374 375 1.393196 TCGTACTCATTTGCGTGCATG 59.607 47.619 0.09 0.09 0.00 4.06
375 376 1.393196 CGTACTCATTTGCGTGCATGA 59.607 47.619 10.93 0.00 0.00 3.07
376 377 2.030823 CGTACTCATTTGCGTGCATGAT 59.969 45.455 10.93 0.00 0.00 2.45
377 378 3.485711 CGTACTCATTTGCGTGCATGATT 60.486 43.478 10.93 0.00 0.00 2.57
378 379 4.260172 CGTACTCATTTGCGTGCATGATTA 60.260 41.667 10.93 0.00 0.00 1.75
379 380 4.282950 ACTCATTTGCGTGCATGATTAG 57.717 40.909 10.93 0.00 0.00 1.73
380 381 3.691118 ACTCATTTGCGTGCATGATTAGT 59.309 39.130 10.93 0.00 0.00 2.24
381 382 4.018649 TCATTTGCGTGCATGATTAGTG 57.981 40.909 10.93 1.46 0.00 2.74
382 383 3.439825 TCATTTGCGTGCATGATTAGTGT 59.560 39.130 10.93 0.00 0.00 3.55
383 384 4.633565 TCATTTGCGTGCATGATTAGTGTA 59.366 37.500 10.93 0.00 0.00 2.90
384 385 4.335082 TTTGCGTGCATGATTAGTGTAC 57.665 40.909 10.93 0.00 0.00 2.90
387 388 2.536365 CGTGCATGATTAGTGTACGGT 58.464 47.619 0.00 0.00 46.91 4.83
388 389 2.927477 CGTGCATGATTAGTGTACGGTT 59.073 45.455 0.00 0.00 46.91 4.44
389 390 4.106909 CGTGCATGATTAGTGTACGGTTA 58.893 43.478 0.00 0.00 46.91 2.85
390 391 4.563580 CGTGCATGATTAGTGTACGGTTAA 59.436 41.667 0.00 0.00 46.91 2.01
391 392 5.062433 CGTGCATGATTAGTGTACGGTTAAA 59.938 40.000 0.00 0.00 46.91 1.52
392 393 6.237996 CGTGCATGATTAGTGTACGGTTAAAT 60.238 38.462 0.00 0.00 46.91 1.40
393 394 7.123830 GTGCATGATTAGTGTACGGTTAAATC 58.876 38.462 0.00 0.00 0.00 2.17
394 395 6.019398 TGCATGATTAGTGTACGGTTAAATCG 60.019 38.462 0.00 0.00 0.00 3.34
395 396 6.563381 GCATGATTAGTGTACGGTTAAATCGG 60.563 42.308 0.00 0.00 0.00 4.18
396 397 5.350633 TGATTAGTGTACGGTTAAATCGGG 58.649 41.667 4.81 0.00 0.00 5.14
397 398 2.678471 AGTGTACGGTTAAATCGGGG 57.322 50.000 4.81 0.00 0.00 5.73
398 399 1.207811 AGTGTACGGTTAAATCGGGGG 59.792 52.381 4.81 0.00 0.00 5.40
399 400 0.107752 TGTACGGTTAAATCGGGGGC 60.108 55.000 4.81 0.00 0.00 5.80
400 401 1.143620 TACGGTTAAATCGGGGGCG 59.856 57.895 4.81 0.00 0.00 6.13
401 402 1.612395 TACGGTTAAATCGGGGGCGT 61.612 55.000 0.00 0.00 0.00 5.68
402 403 2.175621 CGGTTAAATCGGGGGCGTC 61.176 63.158 0.00 0.00 0.00 5.19
403 404 1.078285 GGTTAAATCGGGGGCGTCA 60.078 57.895 0.00 0.00 0.00 4.35
404 405 1.371337 GGTTAAATCGGGGGCGTCAC 61.371 60.000 0.00 0.00 0.00 3.67
418 419 2.346803 GCGTCACAGCCTTCTTATTCA 58.653 47.619 0.00 0.00 0.00 2.57
419 420 2.939103 GCGTCACAGCCTTCTTATTCAT 59.061 45.455 0.00 0.00 0.00 2.57
422 423 4.872691 CGTCACAGCCTTCTTATTCATTCT 59.127 41.667 0.00 0.00 0.00 2.40
430 431 9.553064 CAGCCTTCTTATTCATTCTATTGTACT 57.447 33.333 0.00 0.00 0.00 2.73
445 446 1.004679 TACTCCGCCCACCGAAAAC 60.005 57.895 0.00 0.00 40.02 2.43
458 459 4.111916 CACCGAAAACTGAAAATTGCACT 58.888 39.130 0.00 0.00 0.00 4.40
478 479 6.377996 TGCACTGAGCCAACAATAATAGATTT 59.622 34.615 0.00 0.00 44.83 2.17
537 538 0.604578 TCAGTTTAACCTCCGGTCCG 59.395 55.000 3.60 3.60 33.12 4.79
578 579 4.033587 CGGAGAACTAGAGAAAGAGAGTCG 59.966 50.000 0.00 0.00 0.00 4.18
590 591 4.820284 AAGAGAGTCGCAAAGGAAAAAG 57.180 40.909 0.00 0.00 0.00 2.27
591 592 4.073293 AGAGAGTCGCAAAGGAAAAAGA 57.927 40.909 0.00 0.00 0.00 2.52
594 595 5.357032 AGAGAGTCGCAAAGGAAAAAGAAAA 59.643 36.000 0.00 0.00 0.00 2.29
595 596 5.961272 AGAGTCGCAAAGGAAAAAGAAAAA 58.039 33.333 0.00 0.00 0.00 1.94
596 597 6.036470 AGAGTCGCAAAGGAAAAAGAAAAAG 58.964 36.000 0.00 0.00 0.00 2.27
597 598 5.961272 AGTCGCAAAGGAAAAAGAAAAAGA 58.039 33.333 0.00 0.00 0.00 2.52
598 599 6.036470 AGTCGCAAAGGAAAAAGAAAAAGAG 58.964 36.000 0.00 0.00 0.00 2.85
599 600 6.033966 GTCGCAAAGGAAAAAGAAAAAGAGA 58.966 36.000 0.00 0.00 0.00 3.10
600 601 6.530181 GTCGCAAAGGAAAAAGAAAAAGAGAA 59.470 34.615 0.00 0.00 0.00 2.87
601 602 6.530181 TCGCAAAGGAAAAAGAAAAAGAGAAC 59.470 34.615 0.00 0.00 0.00 3.01
602 603 6.237835 CGCAAAGGAAAAAGAAAAAGAGAACC 60.238 38.462 0.00 0.00 0.00 3.62
603 604 6.593770 GCAAAGGAAAAAGAAAAAGAGAACCA 59.406 34.615 0.00 0.00 0.00 3.67
604 605 7.201556 GCAAAGGAAAAAGAAAAAGAGAACCAG 60.202 37.037 0.00 0.00 0.00 4.00
605 606 7.718334 AAGGAAAAAGAAAAAGAGAACCAGA 57.282 32.000 0.00 0.00 0.00 3.86
606 607 7.340122 AGGAAAAAGAAAAAGAGAACCAGAG 57.660 36.000 0.00 0.00 0.00 3.35
616 617 5.878406 AAGAGAACCAGAGAAAGAGAACA 57.122 39.130 0.00 0.00 0.00 3.18
621 622 7.281999 AGAGAACCAGAGAAAGAGAACAAAAAG 59.718 37.037 0.00 0.00 0.00 2.27
650 651 1.003580 GTGGAGGAGCACCAATCTGAA 59.996 52.381 2.07 0.00 39.22 3.02
658 659 2.170187 AGCACCAATCTGAAGCCTAGAG 59.830 50.000 0.00 0.00 0.00 2.43
669 670 0.763652 AGCCTAGAGTGCCATCCATG 59.236 55.000 0.00 0.00 0.00 3.66
673 674 2.369860 CCTAGAGTGCCATCCATGCTAA 59.630 50.000 0.00 0.00 0.00 3.09
700 708 4.503741 TTGTGAGCATGCTAGGTTTTTC 57.496 40.909 22.74 6.26 0.00 2.29
757 765 0.253327 GTTCCTGCCTTCCCTACCTG 59.747 60.000 0.00 0.00 0.00 4.00
782 790 0.532115 AATAGCTTTTTGGGCTGCCG 59.468 50.000 13.40 0.00 40.52 5.69
862 870 3.611674 GCAACCCACCCCAAACCG 61.612 66.667 0.00 0.00 0.00 4.44
863 871 3.611674 CAACCCACCCCAAACCGC 61.612 66.667 0.00 0.00 0.00 5.68
864 872 4.926162 AACCCACCCCAAACCGCC 62.926 66.667 0.00 0.00 0.00 6.13
879 887 4.697756 GCCGCAGCCACACCACTA 62.698 66.667 0.00 0.00 0.00 2.74
881 889 2.343758 CGCAGCCACACCACTACT 59.656 61.111 0.00 0.00 0.00 2.57
882 890 1.738099 CGCAGCCACACCACTACTC 60.738 63.158 0.00 0.00 0.00 2.59
894 902 2.306512 ACCACTACTCTTCCTCTCTCGT 59.693 50.000 0.00 0.00 0.00 4.18
895 903 2.940410 CCACTACTCTTCCTCTCTCGTC 59.060 54.545 0.00 0.00 0.00 4.20
898 906 2.413310 ACTCTTCCTCTCTCGTCTCC 57.587 55.000 0.00 0.00 0.00 3.71
901 909 0.753848 CTTCCTCTCTCGTCTCCCCC 60.754 65.000 0.00 0.00 0.00 5.40
902 910 2.517402 CCTCTCTCGTCTCCCCCG 60.517 72.222 0.00 0.00 0.00 5.73
998 1022 0.689412 GGCCTCTCCTAGCCTCAAGT 60.689 60.000 0.00 0.00 46.14 3.16
1017 1041 2.573915 AGTCATGGGGAAGAAGAAGGAC 59.426 50.000 0.00 0.00 0.00 3.85
1027 1051 2.448453 AGAAGAAGGACCACTACGAGG 58.552 52.381 0.00 0.00 0.00 4.63
1088 1112 3.116531 GGCGTACCACAAGCGGAC 61.117 66.667 0.00 0.00 35.26 4.79
1137 1161 2.158959 GTTCGATCGCCTCACCACG 61.159 63.158 11.09 0.00 0.00 4.94
1159 1183 3.620488 GCCCACAAGGTAATCTCAATCA 58.380 45.455 0.00 0.00 38.26 2.57
1161 1185 4.646492 GCCCACAAGGTAATCTCAATCAAT 59.354 41.667 0.00 0.00 38.26 2.57
1163 1187 6.125029 CCCACAAGGTAATCTCAATCAATCT 58.875 40.000 0.00 0.00 0.00 2.40
1172 1196 7.283127 GGTAATCTCAATCAATCTGCCAAAGTA 59.717 37.037 0.00 0.00 0.00 2.24
1236 1260 1.404477 GCGCGTGTTAATTTGTTGCT 58.596 45.000 8.43 0.00 0.00 3.91
1245 1269 0.936600 AATTTGTTGCTTTGCGTGCC 59.063 45.000 0.00 0.00 0.00 5.01
1358 1382 2.047274 CACGGGTGTAGCACTGGG 60.047 66.667 0.00 0.00 34.40 4.45
1375 1399 1.619807 GGGCAGGGTGGTACGTACAT 61.620 60.000 26.02 4.63 0.00 2.29
1384 1408 0.457035 GGTACGTACATGCCGGAAGA 59.543 55.000 26.02 0.00 0.00 2.87
1542 1672 3.751246 CTAACGGACGGCGGGACA 61.751 66.667 13.24 0.00 0.00 4.02
1543 1673 3.069946 TAACGGACGGCGGGACAT 61.070 61.111 13.24 0.00 0.00 3.06
1544 1674 1.727511 CTAACGGACGGCGGGACATA 61.728 60.000 13.24 0.00 0.00 2.29
1545 1675 2.003658 TAACGGACGGCGGGACATAC 62.004 60.000 13.24 0.00 0.00 2.39
1546 1676 4.918129 CGGACGGCGGGACATACG 62.918 72.222 13.24 0.00 0.00 3.06
1553 1683 4.524318 CGGGACATACGCCGGCTT 62.524 66.667 26.68 19.30 0.00 4.35
1554 1684 2.816718 GGGACATACGCCGGCTTA 59.183 61.111 26.68 21.15 0.00 3.09
1555 1685 1.300697 GGGACATACGCCGGCTTAG 60.301 63.158 26.68 12.04 0.00 2.18
1556 1686 1.300697 GGACATACGCCGGCTTAGG 60.301 63.158 26.68 23.77 0.00 2.69
1559 1689 1.006102 CATACGCCGGCTTAGGAGG 60.006 63.158 26.68 9.51 35.27 4.30
1585 1715 3.461982 GAGCACACGCGTCGACTG 61.462 66.667 9.86 7.88 45.49 3.51
1655 1785 4.261801 ACTTACCTATCACCATTGTGCAC 58.738 43.478 10.75 10.75 42.46 4.57
1658 1788 2.040278 ACCTATCACCATTGTGCACTGT 59.960 45.455 19.41 7.21 42.46 3.55
1683 1813 3.275617 AGGTTGTCACAGCTTAACACA 57.724 42.857 0.00 0.00 0.00 3.72
1707 1837 3.821600 TCCTCTATGCATTCGTCTAGTCC 59.178 47.826 3.54 0.00 0.00 3.85
1710 1840 2.493713 ATGCATTCGTCTAGTCCGTC 57.506 50.000 0.00 0.00 0.00 4.79
1716 1846 4.497674 GCATTCGTCTAGTCCGTCAAGTAT 60.498 45.833 4.88 0.00 0.00 2.12
1743 1873 6.693545 CGAATGAGTACTACAATGAGGAGAAC 59.306 42.308 0.00 0.00 0.00 3.01
1744 1874 7.482169 AATGAGTACTACAATGAGGAGAACA 57.518 36.000 0.00 0.00 0.00 3.18
1798 1928 1.207089 CCGACCATAGCACCTTCAAGA 59.793 52.381 0.00 0.00 0.00 3.02
1800 1930 2.271800 GACCATAGCACCTTCAAGACG 58.728 52.381 0.00 0.00 0.00 4.18
1801 1931 1.066143 ACCATAGCACCTTCAAGACGG 60.066 52.381 0.00 0.00 0.00 4.79
1802 1932 1.066143 CCATAGCACCTTCAAGACGGT 60.066 52.381 0.00 0.00 0.00 4.83
1803 1933 2.167693 CCATAGCACCTTCAAGACGGTA 59.832 50.000 0.00 0.00 30.91 4.02
1804 1934 3.369052 CCATAGCACCTTCAAGACGGTAA 60.369 47.826 0.00 0.00 30.91 2.85
1805 1935 2.922740 AGCACCTTCAAGACGGTAAA 57.077 45.000 0.00 0.00 30.91 2.01
1806 1936 2.767505 AGCACCTTCAAGACGGTAAAG 58.232 47.619 0.00 0.00 30.91 1.85
1807 1937 1.197036 GCACCTTCAAGACGGTAAAGC 59.803 52.381 0.00 0.00 30.91 3.51
1808 1938 1.804748 CACCTTCAAGACGGTAAAGCC 59.195 52.381 0.00 0.00 30.91 4.35
1819 1949 2.624316 GGTAAAGCCGGCAAACTTAC 57.376 50.000 31.54 25.73 0.00 2.34
1820 1950 1.135888 GGTAAAGCCGGCAAACTTACG 60.136 52.381 31.54 0.00 0.00 3.18
1821 1951 1.532437 GTAAAGCCGGCAAACTTACGT 59.468 47.619 31.54 0.00 0.00 3.57
1822 1952 1.881591 AAAGCCGGCAAACTTACGTA 58.118 45.000 31.54 0.00 0.00 3.57
1823 1953 2.103537 AAGCCGGCAAACTTACGTAT 57.896 45.000 31.54 0.00 0.00 3.06
1824 1954 1.648504 AGCCGGCAAACTTACGTATC 58.351 50.000 31.54 0.00 0.00 2.24
1825 1955 1.066716 AGCCGGCAAACTTACGTATCA 60.067 47.619 31.54 0.00 0.00 2.15
1826 1956 1.061566 GCCGGCAAACTTACGTATCAC 59.938 52.381 24.80 0.00 0.00 3.06
1827 1957 1.662122 CCGGCAAACTTACGTATCACC 59.338 52.381 0.00 0.00 0.00 4.02
1828 1958 2.339418 CGGCAAACTTACGTATCACCA 58.661 47.619 0.00 0.00 0.00 4.17
1829 1959 2.933906 CGGCAAACTTACGTATCACCAT 59.066 45.455 0.00 0.00 0.00 3.55
1830 1960 3.372822 CGGCAAACTTACGTATCACCATT 59.627 43.478 0.00 0.00 0.00 3.16
1831 1961 4.658071 GGCAAACTTACGTATCACCATTG 58.342 43.478 0.00 0.00 0.00 2.82
1832 1962 4.155280 GGCAAACTTACGTATCACCATTGT 59.845 41.667 0.00 0.00 0.00 2.71
1833 1963 5.086058 GCAAACTTACGTATCACCATTGTG 58.914 41.667 0.00 0.00 44.18 3.33
1834 1964 4.939509 AACTTACGTATCACCATTGTGC 57.060 40.909 0.00 0.00 42.46 4.57
1835 1965 3.932822 ACTTACGTATCACCATTGTGCA 58.067 40.909 0.00 0.00 42.46 4.57
1836 1966 3.682858 ACTTACGTATCACCATTGTGCAC 59.317 43.478 10.75 10.75 42.46 4.57
1837 1967 2.472695 ACGTATCACCATTGTGCACT 57.527 45.000 19.41 0.00 42.46 4.40
1838 1968 2.346803 ACGTATCACCATTGTGCACTC 58.653 47.619 19.41 0.00 42.46 3.51
1839 1969 2.028112 ACGTATCACCATTGTGCACTCT 60.028 45.455 19.41 1.77 42.46 3.24
1840 1970 2.604914 CGTATCACCATTGTGCACTCTC 59.395 50.000 19.41 0.00 42.46 3.20
1841 1971 3.677148 CGTATCACCATTGTGCACTCTCT 60.677 47.826 19.41 0.00 42.46 3.10
1842 1972 2.462456 TCACCATTGTGCACTCTCTC 57.538 50.000 19.41 0.00 42.46 3.20
1843 1973 1.973515 TCACCATTGTGCACTCTCTCT 59.026 47.619 19.41 0.00 42.46 3.10
1844 1974 3.165071 TCACCATTGTGCACTCTCTCTA 58.835 45.455 19.41 0.00 42.46 2.43
1845 1975 3.771479 TCACCATTGTGCACTCTCTCTAT 59.229 43.478 19.41 0.00 42.46 1.98
1846 1976 3.869832 CACCATTGTGCACTCTCTCTATG 59.130 47.826 19.41 9.44 35.31 2.23
1847 1977 3.517100 ACCATTGTGCACTCTCTCTATGT 59.483 43.478 19.41 0.33 0.00 2.29
1848 1978 4.019860 ACCATTGTGCACTCTCTCTATGTT 60.020 41.667 19.41 0.00 0.00 2.71
1849 1979 4.331992 CCATTGTGCACTCTCTCTATGTTG 59.668 45.833 19.41 0.00 0.00 3.33
1850 1980 4.607293 TTGTGCACTCTCTCTATGTTGT 57.393 40.909 19.41 0.00 0.00 3.32
1851 1981 4.179926 TGTGCACTCTCTCTATGTTGTC 57.820 45.455 19.41 0.00 0.00 3.18
1852 1982 3.573967 TGTGCACTCTCTCTATGTTGTCA 59.426 43.478 19.41 0.00 0.00 3.58
1853 1983 4.221482 TGTGCACTCTCTCTATGTTGTCAT 59.779 41.667 19.41 0.00 38.00 3.06
1854 1984 4.565962 GTGCACTCTCTCTATGTTGTCATG 59.434 45.833 10.32 0.00 35.70 3.07
1855 1985 4.118410 GCACTCTCTCTATGTTGTCATGG 58.882 47.826 0.00 0.00 35.70 3.66
1856 1986 4.118410 CACTCTCTCTATGTTGTCATGGC 58.882 47.826 0.00 0.00 35.70 4.40
1857 1987 3.771479 ACTCTCTCTATGTTGTCATGGCA 59.229 43.478 0.00 0.00 35.70 4.92
1858 1988 4.408270 ACTCTCTCTATGTTGTCATGGCAT 59.592 41.667 0.00 0.00 35.70 4.40
1859 1989 5.600069 ACTCTCTCTATGTTGTCATGGCATA 59.400 40.000 0.00 0.00 35.70 3.14
1860 1990 6.098838 ACTCTCTCTATGTTGTCATGGCATAA 59.901 38.462 0.00 0.00 35.70 1.90
1861 1991 6.283694 TCTCTCTATGTTGTCATGGCATAAC 58.716 40.000 0.00 1.81 35.70 1.89
1862 1992 5.988287 TCTCTATGTTGTCATGGCATAACA 58.012 37.500 14.69 14.69 37.43 2.41
1863 1993 5.817296 TCTCTATGTTGTCATGGCATAACAC 59.183 40.000 14.64 0.00 36.05 3.32
1864 1994 5.495640 TCTATGTTGTCATGGCATAACACA 58.504 37.500 14.64 6.01 36.05 3.72
1865 1995 3.913548 TGTTGTCATGGCATAACACAC 57.086 42.857 2.08 6.11 0.00 3.82
1866 1996 3.485394 TGTTGTCATGGCATAACACACT 58.515 40.909 2.08 0.00 0.00 3.55
1867 1997 3.252944 TGTTGTCATGGCATAACACACTG 59.747 43.478 2.08 0.00 0.00 3.66
1868 1998 1.811965 TGTCATGGCATAACACACTGC 59.188 47.619 0.00 0.00 37.66 4.40
1869 1999 2.086869 GTCATGGCATAACACACTGCT 58.913 47.619 0.00 0.00 38.45 4.24
1870 2000 2.096496 GTCATGGCATAACACACTGCTC 59.904 50.000 0.00 0.00 38.45 4.26
1871 2001 2.026915 TCATGGCATAACACACTGCTCT 60.027 45.455 0.00 0.00 38.45 4.09
1872 2002 3.197549 TCATGGCATAACACACTGCTCTA 59.802 43.478 0.00 0.00 38.45 2.43
1873 2003 3.912496 TGGCATAACACACTGCTCTAT 57.088 42.857 0.00 0.00 38.45 1.98
1874 2004 3.534554 TGGCATAACACACTGCTCTATG 58.465 45.455 0.00 0.00 38.45 2.23
1875 2005 2.289002 GGCATAACACACTGCTCTATGC 59.711 50.000 4.21 4.21 42.59 3.14
1887 2017 2.333014 GCTCTATGCATTCGTCTAGGC 58.667 52.381 3.54 0.00 42.31 3.93
1888 2018 2.928731 GCTCTATGCATTCGTCTAGGCC 60.929 54.545 3.54 0.00 42.31 5.19
1889 2019 1.269723 TCTATGCATTCGTCTAGGCCG 59.730 52.381 3.54 0.00 0.00 6.13
1890 2020 1.000163 CTATGCATTCGTCTAGGCCGT 60.000 52.381 3.54 0.00 0.00 5.68
1891 2021 0.530650 ATGCATTCGTCTAGGCCGTG 60.531 55.000 0.00 0.00 0.00 4.94
1892 2022 1.141019 GCATTCGTCTAGGCCGTGA 59.859 57.895 0.00 0.00 0.00 4.35
1893 2023 0.459585 GCATTCGTCTAGGCCGTGAA 60.460 55.000 0.00 0.00 0.00 3.18
1894 2024 2.004583 CATTCGTCTAGGCCGTGAAA 57.995 50.000 0.00 0.00 0.00 2.69
1895 2025 2.550978 CATTCGTCTAGGCCGTGAAAT 58.449 47.619 0.00 0.00 0.00 2.17
1896 2026 3.713288 CATTCGTCTAGGCCGTGAAATA 58.287 45.455 0.00 0.00 0.00 1.40
1897 2027 4.307432 CATTCGTCTAGGCCGTGAAATAT 58.693 43.478 0.00 0.00 0.00 1.28
1898 2028 5.466819 CATTCGTCTAGGCCGTGAAATATA 58.533 41.667 0.00 0.00 0.00 0.86
1899 2029 4.494350 TCGTCTAGGCCGTGAAATATAC 57.506 45.455 0.00 0.00 0.00 1.47
1900 2030 3.058708 TCGTCTAGGCCGTGAAATATACG 60.059 47.826 0.00 0.00 40.98 3.06
1901 2031 3.058708 CGTCTAGGCCGTGAAATATACGA 60.059 47.826 0.00 0.00 43.82 3.43
1902 2032 4.555313 CGTCTAGGCCGTGAAATATACGAA 60.555 45.833 0.00 0.00 43.82 3.85
1903 2033 5.467705 GTCTAGGCCGTGAAATATACGAAT 58.532 41.667 0.00 0.00 43.82 3.34
1904 2034 5.345202 GTCTAGGCCGTGAAATATACGAATG 59.655 44.000 0.00 0.00 43.82 2.67
1905 2035 4.330944 AGGCCGTGAAATATACGAATGA 57.669 40.909 0.00 0.00 43.82 2.57
1906 2036 4.307432 AGGCCGTGAAATATACGAATGAG 58.693 43.478 0.00 0.00 43.82 2.90
1907 2037 4.056050 GGCCGTGAAATATACGAATGAGT 58.944 43.478 0.00 0.00 43.82 3.41
1908 2038 5.010314 AGGCCGTGAAATATACGAATGAGTA 59.990 40.000 0.00 0.00 43.82 2.59
1909 2039 5.118203 GGCCGTGAAATATACGAATGAGTAC 59.882 44.000 0.00 0.00 43.82 2.73
1910 2040 5.919141 GCCGTGAAATATACGAATGAGTACT 59.081 40.000 0.00 0.00 43.82 2.73
1911 2041 7.080099 GCCGTGAAATATACGAATGAGTACTA 58.920 38.462 0.00 0.00 43.82 1.82
1912 2042 7.060403 GCCGTGAAATATACGAATGAGTACTAC 59.940 40.741 0.00 0.00 43.82 2.73
1913 2043 8.071967 CCGTGAAATATACGAATGAGTACTACA 58.928 37.037 0.00 0.00 43.82 2.74
1914 2044 8.889975 CGTGAAATATACGAATGAGTACTACAC 58.110 37.037 0.00 0.00 43.82 2.90
1915 2045 9.947669 GTGAAATATACGAATGAGTACTACACT 57.052 33.333 0.00 0.00 41.47 3.55
1916 2046 9.946165 TGAAATATACGAATGAGTACTACACTG 57.054 33.333 0.00 0.00 37.72 3.66
1919 2049 4.966965 ACGAATGAGTACTACACTGAGG 57.033 45.455 0.00 0.00 37.72 3.86
1920 2050 4.586884 ACGAATGAGTACTACACTGAGGA 58.413 43.478 0.00 0.00 37.72 3.71
1921 2051 4.636648 ACGAATGAGTACTACACTGAGGAG 59.363 45.833 0.00 0.00 37.72 3.69
1922 2052 4.876679 CGAATGAGTACTACACTGAGGAGA 59.123 45.833 0.00 0.00 37.72 3.71
1923 2053 5.354513 CGAATGAGTACTACACTGAGGAGAA 59.645 44.000 0.00 0.00 37.72 2.87
1924 2054 6.518208 AATGAGTACTACACTGAGGAGAAC 57.482 41.667 0.00 0.00 37.72 3.01
1925 2055 5.244189 TGAGTACTACACTGAGGAGAACT 57.756 43.478 0.00 0.00 37.72 3.01
1926 2056 5.004448 TGAGTACTACACTGAGGAGAACTG 58.996 45.833 0.00 0.00 37.72 3.16
1927 2057 4.988029 AGTACTACACTGAGGAGAACTGT 58.012 43.478 0.00 0.00 35.62 3.55
1928 2058 5.386924 AGTACTACACTGAGGAGAACTGTT 58.613 41.667 0.00 0.00 35.62 3.16
1929 2059 4.857509 ACTACACTGAGGAGAACTGTTC 57.142 45.455 12.54 12.54 0.00 3.18
1930 2060 4.215908 ACTACACTGAGGAGAACTGTTCA 58.784 43.478 21.50 1.27 0.00 3.18
1931 2061 4.835615 ACTACACTGAGGAGAACTGTTCAT 59.164 41.667 21.50 7.83 0.00 2.57
1932 2062 4.264460 ACACTGAGGAGAACTGTTCATC 57.736 45.455 21.50 15.71 0.00 2.92
1933 2063 3.643320 ACACTGAGGAGAACTGTTCATCA 59.357 43.478 21.50 18.74 0.00 3.07
1934 2064 4.285517 ACACTGAGGAGAACTGTTCATCAT 59.714 41.667 21.50 13.38 0.00 2.45
1935 2065 5.221803 ACACTGAGGAGAACTGTTCATCATT 60.222 40.000 21.50 13.18 0.00 2.57
1936 2066 5.350914 CACTGAGGAGAACTGTTCATCATTC 59.649 44.000 21.50 10.14 0.00 2.67
1937 2067 4.498241 TGAGGAGAACTGTTCATCATTCG 58.502 43.478 21.50 0.00 0.00 3.34
1938 2068 4.220602 TGAGGAGAACTGTTCATCATTCGA 59.779 41.667 21.50 0.00 0.00 3.71
1939 2069 4.499183 AGGAGAACTGTTCATCATTCGAC 58.501 43.478 21.50 4.25 0.00 4.20
1940 2070 3.304559 GGAGAACTGTTCATCATTCGACG 59.695 47.826 21.50 0.00 0.00 5.12
1941 2071 3.254060 AGAACTGTTCATCATTCGACGG 58.746 45.455 21.50 0.00 0.00 4.79
1942 2072 1.359848 ACTGTTCATCATTCGACGGC 58.640 50.000 0.00 0.00 0.00 5.68
1943 2073 0.298707 CTGTTCATCATTCGACGGCG 59.701 55.000 2.87 2.87 39.35 6.46
1944 2074 0.109039 TGTTCATCATTCGACGGCGA 60.109 50.000 10.67 10.67 46.33 5.54
1952 2082 3.449227 TCGACGGCGAGCCATTCT 61.449 61.111 10.67 0.00 42.51 2.40
1953 2083 3.257561 CGACGGCGAGCCATTCTG 61.258 66.667 16.62 0.00 40.82 3.02
1954 2084 3.567797 GACGGCGAGCCATTCTGC 61.568 66.667 16.62 0.00 35.37 4.26
1958 2088 4.802051 GCGAGCCATTCTGCCCCA 62.802 66.667 0.00 0.00 0.00 4.96
1959 2089 2.825836 CGAGCCATTCTGCCCCAC 60.826 66.667 0.00 0.00 0.00 4.61
1960 2090 2.440980 GAGCCATTCTGCCCCACC 60.441 66.667 0.00 0.00 0.00 4.61
1961 2091 4.431131 AGCCATTCTGCCCCACCG 62.431 66.667 0.00 0.00 0.00 4.94
1962 2092 4.424711 GCCATTCTGCCCCACCGA 62.425 66.667 0.00 0.00 0.00 4.69
1963 2093 2.438434 CCATTCTGCCCCACCGAC 60.438 66.667 0.00 0.00 0.00 4.79
1964 2094 2.438434 CATTCTGCCCCACCGACC 60.438 66.667 0.00 0.00 0.00 4.79
1965 2095 2.933287 ATTCTGCCCCACCGACCA 60.933 61.111 0.00 0.00 0.00 4.02
1966 2096 2.308722 ATTCTGCCCCACCGACCAT 61.309 57.895 0.00 0.00 0.00 3.55
1967 2097 0.986019 ATTCTGCCCCACCGACCATA 60.986 55.000 0.00 0.00 0.00 2.74
1968 2098 1.622607 TTCTGCCCCACCGACCATAG 61.623 60.000 0.00 0.00 0.00 2.23
1969 2099 3.757248 CTGCCCCACCGACCATAGC 62.757 68.421 0.00 0.00 0.00 2.97
1970 2100 3.792736 GCCCCACCGACCATAGCA 61.793 66.667 0.00 0.00 0.00 3.49
1971 2101 2.189521 CCCCACCGACCATAGCAC 59.810 66.667 0.00 0.00 0.00 4.40
1972 2102 2.189521 CCCACCGACCATAGCACC 59.810 66.667 0.00 0.00 0.00 5.01
1973 2103 2.367202 CCCACCGACCATAGCACCT 61.367 63.158 0.00 0.00 0.00 4.00
1974 2104 1.602237 CCACCGACCATAGCACCTT 59.398 57.895 0.00 0.00 0.00 3.50
1975 2105 0.462047 CCACCGACCATAGCACCTTC 60.462 60.000 0.00 0.00 0.00 3.46
1976 2106 0.249120 CACCGACCATAGCACCTTCA 59.751 55.000 0.00 0.00 0.00 3.02
1977 2107 0.981183 ACCGACCATAGCACCTTCAA 59.019 50.000 0.00 0.00 0.00 2.69
1978 2108 1.066143 ACCGACCATAGCACCTTCAAG 60.066 52.381 0.00 0.00 0.00 3.02
1979 2109 1.207089 CCGACCATAGCACCTTCAAGA 59.793 52.381 0.00 0.00 0.00 3.02
1980 2110 2.158900 CCGACCATAGCACCTTCAAGAT 60.159 50.000 0.00 0.00 0.00 2.40
2030 2160 5.927689 ACATTACCATTGTGTGCATTCTTTG 59.072 36.000 0.00 0.00 0.00 2.77
2144 2274 1.300388 GGTTGTGCGTGTACGAGGT 60.300 57.895 8.82 0.00 43.02 3.85
2195 2325 2.440796 CGGGGCTGGCAATGATGT 60.441 61.111 2.88 0.00 0.00 3.06
2274 2691 3.065019 GCAAAATACGATGATTGCGGT 57.935 42.857 0.00 0.00 38.79 5.68
2339 2882 1.065053 TGATGATACCGGGGTTTGTGG 60.065 52.381 6.32 0.00 0.00 4.17
2353 2896 2.975410 TTGTGGTGACTACTACGACG 57.025 50.000 0.00 0.00 40.79 5.12
2355 2898 1.800586 TGTGGTGACTACTACGACGAC 59.199 52.381 0.00 0.00 40.79 4.34
2690 3240 6.198650 TGTGTTTCTTCATTGCTCATATGG 57.801 37.500 2.13 0.00 0.00 2.74
2698 3248 7.988737 TCTTCATTGCTCATATGGTAAGTTTG 58.011 34.615 2.13 0.00 0.00 2.93
2701 3251 3.961849 TGCTCATATGGTAAGTTTGGCA 58.038 40.909 2.13 0.00 0.00 4.92
2757 3307 7.094762 CCTTCCACTTACTGGTTTAACAAGATC 60.095 40.741 6.48 0.00 41.52 2.75
2781 3331 3.039011 TCCTAGTCCTGTTTATGAGGGC 58.961 50.000 0.00 0.00 35.21 5.19
2785 3335 2.239907 AGTCCTGTTTATGAGGGCCTTC 59.760 50.000 7.89 8.18 35.63 3.46
2786 3336 1.564348 TCCTGTTTATGAGGGCCTTCC 59.436 52.381 13.07 0.00 0.00 3.46
2787 3337 1.284785 CCTGTTTATGAGGGCCTTCCA 59.715 52.381 13.07 1.40 38.24 3.53
2789 3339 1.992557 TGTTTATGAGGGCCTTCCACT 59.007 47.619 13.07 0.00 38.24 4.00
2790 3340 2.378547 TGTTTATGAGGGCCTTCCACTT 59.621 45.455 13.07 0.00 38.24 3.16
2791 3341 3.589735 TGTTTATGAGGGCCTTCCACTTA 59.410 43.478 13.07 0.00 38.24 2.24
2792 3342 3.926058 TTATGAGGGCCTTCCACTTAC 57.074 47.619 13.07 0.00 38.24 2.34
2793 3343 1.972588 ATGAGGGCCTTCCACTTACT 58.027 50.000 13.07 0.00 38.24 2.24
2794 3344 0.984230 TGAGGGCCTTCCACTTACTG 59.016 55.000 13.07 0.00 38.24 2.74
2828 3390 2.425312 CGCACTTCCACATCTCTAGACT 59.575 50.000 0.00 0.00 0.00 3.24
2829 3391 3.733380 CGCACTTCCACATCTCTAGACTG 60.733 52.174 0.00 0.00 0.00 3.51
2956 3531 5.221722 TGGATAATCCCAGAGACAGTAATGC 60.222 44.000 0.00 0.00 35.03 3.56
3112 6767 1.273838 TGATGGACCTGGGAAGCTACT 60.274 52.381 0.00 0.00 0.00 2.57
3143 6798 9.626045 CCTAGCTCTGTTTTAAATTCGAAAATT 57.374 29.630 0.00 3.23 36.64 1.82
3250 6905 5.221722 TGCAAGATCTCTTAAGAAGTGGTGT 60.222 40.000 6.63 0.00 34.49 4.16
3276 6931 2.169561 AGAAACAACCACCGCCAAAAAT 59.830 40.909 0.00 0.00 0.00 1.82
3333 6991 4.496175 GCTTGGCAAATGTTTTTGTTGGAG 60.496 41.667 0.00 0.00 43.43 3.86
3334 6992 2.941720 TGGCAAATGTTTTTGTTGGAGC 59.058 40.909 0.00 0.00 43.43 4.70
3343 7001 5.537188 TGTTTTTGTTGGAGCATAATGTCC 58.463 37.500 0.00 0.00 0.00 4.02
3345 7003 2.036958 TGTTGGAGCATAATGTCCGG 57.963 50.000 0.00 0.00 35.37 5.14
3351 7009 1.056700 AGCATAATGTCCGGCCCTCT 61.057 55.000 0.00 0.00 0.00 3.69
3353 7011 0.035458 CATAATGTCCGGCCCTCTCC 59.965 60.000 0.00 0.00 0.00 3.71
3354 7012 1.128188 ATAATGTCCGGCCCTCTCCC 61.128 60.000 0.00 0.00 0.00 4.30
3355 7013 2.252012 TAATGTCCGGCCCTCTCCCT 62.252 60.000 0.00 0.00 0.00 4.20
3356 7014 3.642741 ATGTCCGGCCCTCTCCCTT 62.643 63.158 0.00 0.00 0.00 3.95
3371 7029 5.701290 CCTCTCCCTTGTAAGTGTTGTAAAG 59.299 44.000 0.00 0.00 0.00 1.85
3392 7050 3.118956 AGTCGGTCATGAATTCTGGAGAC 60.119 47.826 7.05 8.85 0.00 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 1.352352 CCTGGACTCCAACATCTGGTT 59.648 52.381 0.00 0.00 46.51 3.67
2 3 0.987294 CCTGGACTCCAACATCTGGT 59.013 55.000 0.00 0.00 46.51 4.00
4 5 1.406614 GCTCCTGGACTCCAACATCTG 60.407 57.143 0.00 0.00 30.80 2.90
5 6 0.908198 GCTCCTGGACTCCAACATCT 59.092 55.000 0.00 0.00 30.80 2.90
6 7 0.107459 GGCTCCTGGACTCCAACATC 60.107 60.000 0.00 0.00 30.80 3.06
7 8 0.842030 TGGCTCCTGGACTCCAACAT 60.842 55.000 9.76 0.00 30.80 2.71
8 9 1.461268 TGGCTCCTGGACTCCAACA 60.461 57.895 9.76 0.00 30.80 3.33
9 10 1.194781 TCTGGCTCCTGGACTCCAAC 61.195 60.000 12.44 0.00 30.80 3.77
10 11 1.158466 TCTGGCTCCTGGACTCCAA 59.842 57.895 12.44 3.87 30.80 3.53
11 12 1.610673 GTCTGGCTCCTGGACTCCA 60.611 63.158 11.25 11.25 0.00 3.86
12 13 2.716017 CGTCTGGCTCCTGGACTCC 61.716 68.421 0.00 0.00 0.00 3.85
13 14 2.888863 CGTCTGGCTCCTGGACTC 59.111 66.667 0.00 0.00 0.00 3.36
14 15 3.386237 GCGTCTGGCTCCTGGACT 61.386 66.667 0.00 0.00 39.11 3.85
15 16 4.459089 GGCGTCTGGCTCCTGGAC 62.459 72.222 0.00 0.00 42.94 4.02
17 18 4.767255 GTGGCGTCTGGCTCCTGG 62.767 72.222 0.00 0.00 42.94 4.45
29 30 4.986587 TTGTCGTCGACGGTGGCG 62.987 66.667 35.05 11.39 40.29 5.69
30 31 3.400590 GTTGTCGTCGACGGTGGC 61.401 66.667 35.05 22.53 40.29 5.01
31 32 1.728426 GAGTTGTCGTCGACGGTGG 60.728 63.158 35.05 10.02 40.29 4.61
32 33 1.728426 GGAGTTGTCGTCGACGGTG 60.728 63.158 35.05 10.40 40.29 4.94
33 34 0.603707 TAGGAGTTGTCGTCGACGGT 60.604 55.000 35.05 16.32 40.29 4.83
34 35 0.179205 GTAGGAGTTGTCGTCGACGG 60.179 60.000 35.05 18.25 40.29 4.79
35 36 0.517946 CGTAGGAGTTGTCGTCGACG 60.518 60.000 31.30 31.30 41.45 5.12
36 37 3.286901 CGTAGGAGTTGTCGTCGAC 57.713 57.895 18.51 18.51 0.00 4.20
50 51 2.496817 GCTCCTCCAGTGCCGTAG 59.503 66.667 0.00 0.00 0.00 3.51
51 52 3.075005 GGCTCCTCCAGTGCCGTA 61.075 66.667 0.00 0.00 44.74 4.02
55 56 0.747852 GTAGTAGGCTCCTCCAGTGC 59.252 60.000 0.00 0.00 37.29 4.40
56 57 2.445682 AGTAGTAGGCTCCTCCAGTG 57.554 55.000 0.00 0.00 37.29 3.66
57 58 2.158784 CGTAGTAGTAGGCTCCTCCAGT 60.159 54.545 0.00 0.00 37.29 4.00
58 59 2.158784 ACGTAGTAGTAGGCTCCTCCAG 60.159 54.545 0.00 0.00 41.94 3.86
59 60 1.842562 ACGTAGTAGTAGGCTCCTCCA 59.157 52.381 0.00 0.00 41.94 3.86
60 61 2.220313 CACGTAGTAGTAGGCTCCTCC 58.780 57.143 0.00 0.00 41.61 4.30
61 62 1.603326 GCACGTAGTAGTAGGCTCCTC 59.397 57.143 0.00 0.00 41.61 3.71
62 63 1.064906 TGCACGTAGTAGTAGGCTCCT 60.065 52.381 0.00 0.00 41.61 3.69
63 64 1.334243 CTGCACGTAGTAGTAGGCTCC 59.666 57.143 0.00 0.00 41.61 4.70
64 65 1.268640 GCTGCACGTAGTAGTAGGCTC 60.269 57.143 0.00 0.00 41.61 4.70
65 66 0.739561 GCTGCACGTAGTAGTAGGCT 59.260 55.000 0.00 0.00 41.61 4.58
66 67 0.248949 GGCTGCACGTAGTAGTAGGC 60.249 60.000 0.50 0.00 41.61 3.93
67 68 0.384669 GGGCTGCACGTAGTAGTAGG 59.615 60.000 0.50 0.00 41.61 3.18
68 69 0.029035 CGGGCTGCACGTAGTAGTAG 59.971 60.000 17.53 0.00 41.61 2.57
69 70 1.996786 GCGGGCTGCACGTAGTAGTA 61.997 60.000 26.35 0.00 41.61 1.82
70 71 2.882876 CGGGCTGCACGTAGTAGT 59.117 61.111 17.53 0.00 41.61 2.73
71 72 2.582498 GCGGGCTGCACGTAGTAG 60.582 66.667 26.35 0.00 41.61 2.57
80 81 4.819761 TCATCGTCAGCGGGCTGC 62.820 66.667 15.63 11.19 43.31 5.25
81 82 2.887568 GTCATCGTCAGCGGGCTG 60.888 66.667 14.36 14.36 44.86 4.85
82 83 4.148825 GGTCATCGTCAGCGGGCT 62.149 66.667 0.00 0.00 38.89 5.19
83 84 4.451150 TGGTCATCGTCAGCGGGC 62.451 66.667 0.00 0.00 38.89 6.13
84 85 2.202797 CTGGTCATCGTCAGCGGG 60.203 66.667 0.00 0.00 38.89 6.13
85 86 2.202797 CCTGGTCATCGTCAGCGG 60.203 66.667 0.00 0.00 38.89 5.52
86 87 1.226802 CTCCTGGTCATCGTCAGCG 60.227 63.158 0.00 0.00 39.92 5.18
87 88 1.066303 CTACTCCTGGTCATCGTCAGC 59.934 57.143 0.00 0.00 0.00 4.26
88 89 2.370349 ACTACTCCTGGTCATCGTCAG 58.630 52.381 0.00 0.00 0.00 3.51
89 90 2.509166 ACTACTCCTGGTCATCGTCA 57.491 50.000 0.00 0.00 0.00 4.35
90 91 3.512680 CAAACTACTCCTGGTCATCGTC 58.487 50.000 0.00 0.00 0.00 4.20
91 92 2.233922 CCAAACTACTCCTGGTCATCGT 59.766 50.000 0.00 0.00 0.00 3.73
92 93 2.496070 TCCAAACTACTCCTGGTCATCG 59.504 50.000 0.00 0.00 0.00 3.84
93 94 3.118592 CCTCCAAACTACTCCTGGTCATC 60.119 52.174 0.00 0.00 0.00 2.92
94 95 2.840651 CCTCCAAACTACTCCTGGTCAT 59.159 50.000 0.00 0.00 0.00 3.06
95 96 2.158219 TCCTCCAAACTACTCCTGGTCA 60.158 50.000 0.00 0.00 0.00 4.02
96 97 2.498078 CTCCTCCAAACTACTCCTGGTC 59.502 54.545 0.00 0.00 0.00 4.02
97 98 2.541466 CTCCTCCAAACTACTCCTGGT 58.459 52.381 0.00 0.00 0.00 4.00
98 99 1.208293 GCTCCTCCAAACTACTCCTGG 59.792 57.143 0.00 0.00 0.00 4.45
99 100 1.208293 GGCTCCTCCAAACTACTCCTG 59.792 57.143 0.00 0.00 34.01 3.86
100 101 1.574263 GGCTCCTCCAAACTACTCCT 58.426 55.000 0.00 0.00 34.01 3.69
101 102 0.542333 GGGCTCCTCCAAACTACTCC 59.458 60.000 0.00 0.00 36.21 3.85
102 103 1.208293 CTGGGCTCCTCCAAACTACTC 59.792 57.143 0.00 0.00 36.21 2.59
103 104 1.280457 CTGGGCTCCTCCAAACTACT 58.720 55.000 0.00 0.00 36.21 2.57
104 105 0.253327 CCTGGGCTCCTCCAAACTAC 59.747 60.000 0.00 0.00 36.21 2.73
105 106 1.562672 GCCTGGGCTCCTCCAAACTA 61.563 60.000 4.12 0.00 36.21 2.24
106 107 2.911926 GCCTGGGCTCCTCCAAACT 61.912 63.158 4.12 0.00 36.21 2.66
107 108 2.361737 GCCTGGGCTCCTCCAAAC 60.362 66.667 4.12 0.00 36.21 2.93
108 109 2.858476 TGCCTGGGCTCCTCCAAA 60.858 61.111 13.05 0.00 42.51 3.28
109 110 3.333219 CTGCCTGGGCTCCTCCAA 61.333 66.667 13.05 0.00 42.51 3.53
112 113 3.478274 CTCCTGCCTGGGCTCCTC 61.478 72.222 13.05 0.00 42.51 3.71
131 132 2.956964 GATCGAACGAGGCGCAGG 60.957 66.667 10.83 0.00 0.00 4.85
132 133 2.103143 AGATCGAACGAGGCGCAG 59.897 61.111 10.83 1.82 0.00 5.18
133 134 1.650314 TACAGATCGAACGAGGCGCA 61.650 55.000 10.83 0.00 0.00 6.09
134 135 0.930742 CTACAGATCGAACGAGGCGC 60.931 60.000 0.00 0.00 0.00 6.53
135 136 0.930742 GCTACAGATCGAACGAGGCG 60.931 60.000 2.94 0.00 0.00 5.52
136 137 0.595310 GGCTACAGATCGAACGAGGC 60.595 60.000 2.94 0.00 0.00 4.70
137 138 0.030908 GGGCTACAGATCGAACGAGG 59.969 60.000 2.94 0.00 0.00 4.63
138 139 0.738975 TGGGCTACAGATCGAACGAG 59.261 55.000 2.94 0.00 0.00 4.18
139 140 2.876581 TGGGCTACAGATCGAACGA 58.123 52.632 0.00 0.00 0.00 3.85
154 155 1.168714 GAAGGCTAGCACAAACTGGG 58.831 55.000 18.24 0.00 0.00 4.45
155 156 2.191128 AGAAGGCTAGCACAAACTGG 57.809 50.000 18.24 0.00 0.00 4.00
156 157 4.154918 CCTTAAGAAGGCTAGCACAAACTG 59.845 45.833 18.24 0.00 42.78 3.16
157 158 4.327680 CCTTAAGAAGGCTAGCACAAACT 58.672 43.478 18.24 0.14 42.78 2.66
158 159 4.686839 CCTTAAGAAGGCTAGCACAAAC 57.313 45.455 18.24 0.00 42.78 2.93
169 170 7.489160 AGTTAAACAAGTTTGCCTTAAGAAGG 58.511 34.615 3.36 0.59 41.41 3.46
170 171 8.926715 AAGTTAAACAAGTTTGCCTTAAGAAG 57.073 30.769 3.36 0.00 34.23 2.85
172 173 9.959749 CATAAGTTAAACAAGTTTGCCTTAAGA 57.040 29.630 3.36 4.25 33.73 2.10
173 174 9.744468 ACATAAGTTAAACAAGTTTGCCTTAAG 57.256 29.630 16.01 14.75 33.73 1.85
174 175 9.738832 GACATAAGTTAAACAAGTTTGCCTTAA 57.261 29.630 16.01 2.70 33.73 1.85
175 176 9.127277 AGACATAAGTTAAACAAGTTTGCCTTA 57.873 29.630 8.37 12.58 34.12 2.69
176 177 7.920682 CAGACATAAGTTAAACAAGTTTGCCTT 59.079 33.333 8.37 11.11 34.23 4.35
177 178 7.068226 ACAGACATAAGTTAAACAAGTTTGCCT 59.932 33.333 8.37 1.61 34.23 4.75
178 179 7.200455 ACAGACATAAGTTAAACAAGTTTGCC 58.800 34.615 8.37 0.00 34.23 4.52
179 180 9.166126 GTACAGACATAAGTTAAACAAGTTTGC 57.834 33.333 8.37 2.03 34.23 3.68
182 183 9.826574 TGAGTACAGACATAAGTTAAACAAGTT 57.173 29.630 0.00 0.00 0.00 2.66
183 184 9.477484 CTGAGTACAGACATAAGTTAAACAAGT 57.523 33.333 0.00 0.00 46.03 3.16
184 185 9.692749 TCTGAGTACAGACATAAGTTAAACAAG 57.307 33.333 0.00 0.00 46.55 3.16
200 201 4.153117 GGAAGCAACAACATCTGAGTACAG 59.847 45.833 0.00 0.00 44.66 2.74
201 202 4.065088 GGAAGCAACAACATCTGAGTACA 58.935 43.478 0.00 0.00 0.00 2.90
202 203 3.123621 CGGAAGCAACAACATCTGAGTAC 59.876 47.826 0.00 0.00 0.00 2.73
203 204 3.325870 CGGAAGCAACAACATCTGAGTA 58.674 45.455 0.00 0.00 0.00 2.59
204 205 2.146342 CGGAAGCAACAACATCTGAGT 58.854 47.619 0.00 0.00 0.00 3.41
205 206 2.888513 CGGAAGCAACAACATCTGAG 57.111 50.000 0.00 0.00 0.00 3.35
219 220 1.671328 TCATAGACGAGTCAGCGGAAG 59.329 52.381 5.99 0.00 35.12 3.46
220 221 1.746470 TCATAGACGAGTCAGCGGAA 58.254 50.000 5.99 0.00 35.12 4.30
221 222 1.874231 GATCATAGACGAGTCAGCGGA 59.126 52.381 5.99 0.00 35.12 5.54
222 223 1.399087 CGATCATAGACGAGTCAGCGG 60.399 57.143 5.99 0.00 35.12 5.52
223 224 1.527311 TCGATCATAGACGAGTCAGCG 59.473 52.381 5.99 0.00 34.49 5.18
224 225 3.181826 CTCGATCATAGACGAGTCAGC 57.818 52.381 5.99 0.00 46.90 4.26
230 231 2.683362 ACAAGTGCTCGATCATAGACGA 59.317 45.455 0.00 0.00 37.03 4.20
231 232 3.071786 ACAAGTGCTCGATCATAGACG 57.928 47.619 0.00 0.00 0.00 4.18
232 233 5.340932 CGAATACAAGTGCTCGATCATAGAC 59.659 44.000 0.00 0.00 33.13 2.59
233 234 5.238650 TCGAATACAAGTGCTCGATCATAGA 59.761 40.000 0.00 0.00 35.52 1.98
234 235 5.452777 TCGAATACAAGTGCTCGATCATAG 58.547 41.667 0.00 0.00 35.52 2.23
235 236 5.432885 TCGAATACAAGTGCTCGATCATA 57.567 39.130 0.00 0.00 35.52 2.15
236 237 4.294232 CTCGAATACAAGTGCTCGATCAT 58.706 43.478 8.31 0.00 39.39 2.45
237 238 3.695816 CTCGAATACAAGTGCTCGATCA 58.304 45.455 8.31 0.00 39.39 2.92
238 239 2.469516 GCTCGAATACAAGTGCTCGATC 59.530 50.000 8.31 2.80 39.39 3.69
239 240 2.464865 GCTCGAATACAAGTGCTCGAT 58.535 47.619 8.31 0.00 39.39 3.59
240 241 1.469251 GGCTCGAATACAAGTGCTCGA 60.469 52.381 7.80 7.80 37.95 4.04
241 242 0.924090 GGCTCGAATACAAGTGCTCG 59.076 55.000 0.00 0.00 0.00 5.03
242 243 1.134670 AGGGCTCGAATACAAGTGCTC 60.135 52.381 0.00 0.00 0.00 4.26
243 244 0.905357 AGGGCTCGAATACAAGTGCT 59.095 50.000 0.00 0.00 0.00 4.40
244 245 1.291132 GAGGGCTCGAATACAAGTGC 58.709 55.000 0.00 0.00 0.00 4.40
268 269 2.821969 GCATCATAATACAAGCCAGGGG 59.178 50.000 0.00 0.00 0.00 4.79
269 270 3.504906 CAGCATCATAATACAAGCCAGGG 59.495 47.826 0.00 0.00 0.00 4.45
270 271 3.504906 CCAGCATCATAATACAAGCCAGG 59.495 47.826 0.00 0.00 0.00 4.45
271 272 4.139786 ACCAGCATCATAATACAAGCCAG 58.860 43.478 0.00 0.00 0.00 4.85
272 273 4.169059 ACCAGCATCATAATACAAGCCA 57.831 40.909 0.00 0.00 0.00 4.75
273 274 5.939883 TCATACCAGCATCATAATACAAGCC 59.060 40.000 0.00 0.00 0.00 4.35
274 275 6.652481 AGTCATACCAGCATCATAATACAAGC 59.348 38.462 0.00 0.00 0.00 4.01
275 276 8.613060 AAGTCATACCAGCATCATAATACAAG 57.387 34.615 0.00 0.00 0.00 3.16
283 284 9.578576 AACATAAATAAGTCATACCAGCATCAT 57.421 29.630 0.00 0.00 0.00 2.45
284 285 8.978874 AACATAAATAAGTCATACCAGCATCA 57.021 30.769 0.00 0.00 0.00 3.07
305 306 9.507329 AGATATCACAACACAACTCTAAAACAT 57.493 29.630 5.32 0.00 0.00 2.71
306 307 8.902540 AGATATCACAACACAACTCTAAAACA 57.097 30.769 5.32 0.00 0.00 2.83
307 308 9.813080 GAAGATATCACAACACAACTCTAAAAC 57.187 33.333 5.32 0.00 0.00 2.43
308 309 8.999431 GGAAGATATCACAACACAACTCTAAAA 58.001 33.333 5.32 0.00 0.00 1.52
309 310 7.606456 GGGAAGATATCACAACACAACTCTAAA 59.394 37.037 5.32 0.00 0.00 1.85
310 311 7.103641 GGGAAGATATCACAACACAACTCTAA 58.896 38.462 5.32 0.00 0.00 2.10
311 312 6.627287 CGGGAAGATATCACAACACAACTCTA 60.627 42.308 5.32 0.00 0.00 2.43
312 313 5.491982 GGGAAGATATCACAACACAACTCT 58.508 41.667 5.32 0.00 0.00 3.24
313 314 4.330074 CGGGAAGATATCACAACACAACTC 59.670 45.833 5.32 0.00 0.00 3.01
314 315 4.253685 CGGGAAGATATCACAACACAACT 58.746 43.478 5.32 0.00 0.00 3.16
315 316 4.000988 ACGGGAAGATATCACAACACAAC 58.999 43.478 5.32 0.00 0.00 3.32
316 317 4.000325 CACGGGAAGATATCACAACACAA 59.000 43.478 5.32 0.00 0.00 3.33
317 318 3.259625 TCACGGGAAGATATCACAACACA 59.740 43.478 5.32 0.00 0.00 3.72
318 319 3.857052 TCACGGGAAGATATCACAACAC 58.143 45.455 5.32 0.00 0.00 3.32
319 320 3.513912 ACTCACGGGAAGATATCACAACA 59.486 43.478 5.32 0.00 0.00 3.33
320 321 4.113354 GACTCACGGGAAGATATCACAAC 58.887 47.826 5.32 0.00 0.00 3.32
321 322 3.132289 GGACTCACGGGAAGATATCACAA 59.868 47.826 5.32 0.00 0.00 3.33
322 323 2.693591 GGACTCACGGGAAGATATCACA 59.306 50.000 5.32 0.00 0.00 3.58
323 324 2.036089 GGGACTCACGGGAAGATATCAC 59.964 54.545 5.32 0.00 0.00 3.06
324 325 2.091278 AGGGACTCACGGGAAGATATCA 60.091 50.000 5.32 0.00 0.00 2.15
325 326 2.297597 CAGGGACTCACGGGAAGATATC 59.702 54.545 0.00 0.00 34.60 1.63
326 327 2.091278 TCAGGGACTCACGGGAAGATAT 60.091 50.000 0.00 0.00 34.60 1.63
327 328 1.286849 TCAGGGACTCACGGGAAGATA 59.713 52.381 0.00 0.00 34.60 1.98
328 329 0.041238 TCAGGGACTCACGGGAAGAT 59.959 55.000 0.00 0.00 34.60 2.40
329 330 0.041238 ATCAGGGACTCACGGGAAGA 59.959 55.000 0.00 0.00 34.60 2.87
330 331 0.461961 GATCAGGGACTCACGGGAAG 59.538 60.000 0.00 0.00 34.60 3.46
331 332 0.041238 AGATCAGGGACTCACGGGAA 59.959 55.000 0.00 0.00 34.60 3.97
332 333 0.041238 AAGATCAGGGACTCACGGGA 59.959 55.000 0.00 0.00 34.60 5.14
333 334 0.176680 CAAGATCAGGGACTCACGGG 59.823 60.000 0.00 0.00 34.60 5.28
334 335 1.186200 TCAAGATCAGGGACTCACGG 58.814 55.000 0.00 0.00 34.60 4.94
335 336 2.542618 CGATCAAGATCAGGGACTCACG 60.543 54.545 10.39 0.00 34.60 4.35
336 337 2.428890 ACGATCAAGATCAGGGACTCAC 59.571 50.000 10.39 0.00 34.60 3.51
337 338 2.739943 ACGATCAAGATCAGGGACTCA 58.260 47.619 10.39 0.00 34.60 3.41
338 339 3.886505 AGTACGATCAAGATCAGGGACTC 59.113 47.826 10.39 0.00 34.60 3.36
339 340 3.886505 GAGTACGATCAAGATCAGGGACT 59.113 47.826 10.39 6.69 43.88 3.85
340 341 3.632604 TGAGTACGATCAAGATCAGGGAC 59.367 47.826 10.39 2.30 37.69 4.46
341 342 3.898482 TGAGTACGATCAAGATCAGGGA 58.102 45.455 10.39 0.00 37.69 4.20
342 343 4.862902 ATGAGTACGATCAAGATCAGGG 57.137 45.455 10.39 0.00 37.69 4.45
343 344 5.050499 GCAAATGAGTACGATCAAGATCAGG 60.050 44.000 10.39 0.00 37.69 3.86
344 345 5.332130 CGCAAATGAGTACGATCAAGATCAG 60.332 44.000 10.39 5.82 37.69 2.90
345 346 4.504097 CGCAAATGAGTACGATCAAGATCA 59.496 41.667 10.39 0.00 37.69 2.92
346 347 4.504461 ACGCAAATGAGTACGATCAAGATC 59.496 41.667 0.00 0.00 31.76 2.75
347 348 4.268644 CACGCAAATGAGTACGATCAAGAT 59.731 41.667 0.00 0.00 31.76 2.40
348 349 3.612423 CACGCAAATGAGTACGATCAAGA 59.388 43.478 0.00 0.00 31.76 3.02
349 350 3.782250 GCACGCAAATGAGTACGATCAAG 60.782 47.826 0.00 0.00 31.76 3.02
350 351 2.093625 GCACGCAAATGAGTACGATCAA 59.906 45.455 0.00 0.00 31.76 2.57
351 352 1.658596 GCACGCAAATGAGTACGATCA 59.341 47.619 0.00 0.00 0.00 2.92
352 353 1.658596 TGCACGCAAATGAGTACGATC 59.341 47.619 0.00 0.00 0.00 3.69
353 354 1.720805 TGCACGCAAATGAGTACGAT 58.279 45.000 0.00 0.00 0.00 3.73
354 355 1.393196 CATGCACGCAAATGAGTACGA 59.607 47.619 0.00 0.00 0.00 3.43
355 356 1.393196 TCATGCACGCAAATGAGTACG 59.607 47.619 0.00 0.00 0.00 3.67
356 357 3.680642 ATCATGCACGCAAATGAGTAC 57.319 42.857 0.00 0.00 36.31 2.73
357 358 4.875536 ACTAATCATGCACGCAAATGAGTA 59.124 37.500 0.00 0.00 36.31 2.59
358 359 3.691118 ACTAATCATGCACGCAAATGAGT 59.309 39.130 0.00 0.00 36.31 3.41
359 360 4.033019 CACTAATCATGCACGCAAATGAG 58.967 43.478 0.00 0.00 36.31 2.90
360 361 3.439825 ACACTAATCATGCACGCAAATGA 59.560 39.130 0.00 0.00 37.23 2.57
361 362 3.761657 ACACTAATCATGCACGCAAATG 58.238 40.909 0.00 0.00 0.00 2.32
362 363 4.494035 CGTACACTAATCATGCACGCAAAT 60.494 41.667 0.00 0.00 30.70 2.32
363 364 3.181525 CGTACACTAATCATGCACGCAAA 60.182 43.478 0.00 0.00 30.70 3.68
364 365 2.347150 CGTACACTAATCATGCACGCAA 59.653 45.455 0.00 0.00 30.70 4.85
365 366 1.923864 CGTACACTAATCATGCACGCA 59.076 47.619 0.00 0.00 30.70 5.24
366 367 1.257936 CCGTACACTAATCATGCACGC 59.742 52.381 0.00 0.00 35.86 5.34
367 368 2.536365 ACCGTACACTAATCATGCACG 58.464 47.619 0.00 0.00 36.74 5.34
368 369 6.411630 TTTAACCGTACACTAATCATGCAC 57.588 37.500 0.00 0.00 0.00 4.57
369 370 6.019398 CGATTTAACCGTACACTAATCATGCA 60.019 38.462 0.00 0.00 0.00 3.96
370 371 6.352526 CGATTTAACCGTACACTAATCATGC 58.647 40.000 0.00 0.00 0.00 4.06
371 372 6.073980 CCCGATTTAACCGTACACTAATCATG 60.074 42.308 0.00 0.00 0.00 3.07
372 373 5.987347 CCCGATTTAACCGTACACTAATCAT 59.013 40.000 0.00 0.00 0.00 2.45
373 374 5.350633 CCCGATTTAACCGTACACTAATCA 58.649 41.667 0.00 0.00 0.00 2.57
374 375 4.746611 CCCCGATTTAACCGTACACTAATC 59.253 45.833 0.00 0.00 0.00 1.75
375 376 4.443315 CCCCCGATTTAACCGTACACTAAT 60.443 45.833 0.00 0.00 0.00 1.73
376 377 3.118811 CCCCCGATTTAACCGTACACTAA 60.119 47.826 0.00 0.00 0.00 2.24
377 378 2.430332 CCCCCGATTTAACCGTACACTA 59.570 50.000 0.00 0.00 0.00 2.74
378 379 1.207811 CCCCCGATTTAACCGTACACT 59.792 52.381 0.00 0.00 0.00 3.55
379 380 1.655484 CCCCCGATTTAACCGTACAC 58.345 55.000 0.00 0.00 0.00 2.90
380 381 0.107752 GCCCCCGATTTAACCGTACA 60.108 55.000 0.00 0.00 0.00 2.90
381 382 1.153597 CGCCCCCGATTTAACCGTAC 61.154 60.000 0.00 0.00 36.29 3.67
382 383 1.143620 CGCCCCCGATTTAACCGTA 59.856 57.895 0.00 0.00 36.29 4.02
383 384 2.125024 CGCCCCCGATTTAACCGT 60.125 61.111 0.00 0.00 36.29 4.83
384 385 2.125024 ACGCCCCCGATTTAACCG 60.125 61.111 0.00 0.00 38.29 4.44
385 386 1.078285 TGACGCCCCCGATTTAACC 60.078 57.895 0.00 0.00 38.29 2.85
386 387 0.674269 TGTGACGCCCCCGATTTAAC 60.674 55.000 0.00 0.00 38.29 2.01
387 388 0.391927 CTGTGACGCCCCCGATTTAA 60.392 55.000 0.00 0.00 38.29 1.52
388 389 1.219664 CTGTGACGCCCCCGATTTA 59.780 57.895 0.00 0.00 38.29 1.40
389 390 2.046314 CTGTGACGCCCCCGATTT 60.046 61.111 0.00 0.00 38.29 2.17
390 391 4.778143 GCTGTGACGCCCCCGATT 62.778 66.667 0.00 0.00 38.29 3.34
398 399 2.346803 TGAATAAGAAGGCTGTGACGC 58.653 47.619 0.00 0.00 0.00 5.19
399 400 4.872691 AGAATGAATAAGAAGGCTGTGACG 59.127 41.667 0.00 0.00 0.00 4.35
400 401 8.341173 CAATAGAATGAATAAGAAGGCTGTGAC 58.659 37.037 0.00 0.00 0.00 3.67
401 402 8.049117 ACAATAGAATGAATAAGAAGGCTGTGA 58.951 33.333 0.00 0.00 0.00 3.58
402 403 8.218338 ACAATAGAATGAATAAGAAGGCTGTG 57.782 34.615 0.00 0.00 0.00 3.66
403 404 9.331282 GTACAATAGAATGAATAAGAAGGCTGT 57.669 33.333 0.00 0.00 0.00 4.40
404 405 9.553064 AGTACAATAGAATGAATAAGAAGGCTG 57.447 33.333 0.00 0.00 0.00 4.85
418 419 2.104281 GGTGGGCGGAGTACAATAGAAT 59.896 50.000 0.00 0.00 0.00 2.40
419 420 1.483415 GGTGGGCGGAGTACAATAGAA 59.517 52.381 0.00 0.00 0.00 2.10
422 423 0.683828 TCGGTGGGCGGAGTACAATA 60.684 55.000 0.00 0.00 0.00 1.90
430 431 2.281208 CAGTTTTCGGTGGGCGGA 60.281 61.111 0.00 0.00 0.00 5.54
445 446 3.054878 GTTGGCTCAGTGCAATTTTCAG 58.945 45.455 0.00 0.00 45.15 3.02
537 538 6.903883 TCTCCGACTTTTATGTTTATGCTC 57.096 37.500 0.00 0.00 0.00 4.26
578 579 6.593770 TGGTTCTCTTTTTCTTTTTCCTTTGC 59.406 34.615 0.00 0.00 0.00 3.68
590 591 7.281100 TGTTCTCTTTCTCTGGTTCTCTTTTTC 59.719 37.037 0.00 0.00 0.00 2.29
591 592 7.112779 TGTTCTCTTTCTCTGGTTCTCTTTTT 58.887 34.615 0.00 0.00 0.00 1.94
594 595 5.878406 TGTTCTCTTTCTCTGGTTCTCTT 57.122 39.130 0.00 0.00 0.00 2.85
595 596 5.878406 TTGTTCTCTTTCTCTGGTTCTCT 57.122 39.130 0.00 0.00 0.00 3.10
596 597 6.927294 TTTTGTTCTCTTTCTCTGGTTCTC 57.073 37.500 0.00 0.00 0.00 2.87
597 598 7.112779 TCTTTTTGTTCTCTTTCTCTGGTTCT 58.887 34.615 0.00 0.00 0.00 3.01
598 599 7.321745 TCTTTTTGTTCTCTTTCTCTGGTTC 57.678 36.000 0.00 0.00 0.00 3.62
599 600 7.394641 ACTTCTTTTTGTTCTCTTTCTCTGGTT 59.605 33.333 0.00 0.00 0.00 3.67
600 601 6.887002 ACTTCTTTTTGTTCTCTTTCTCTGGT 59.113 34.615 0.00 0.00 0.00 4.00
601 602 7.326968 ACTTCTTTTTGTTCTCTTTCTCTGG 57.673 36.000 0.00 0.00 0.00 3.86
602 603 9.928236 CTAACTTCTTTTTGTTCTCTTTCTCTG 57.072 33.333 0.00 0.00 0.00 3.35
603 604 9.114952 CCTAACTTCTTTTTGTTCTCTTTCTCT 57.885 33.333 0.00 0.00 0.00 3.10
604 605 8.346300 CCCTAACTTCTTTTTGTTCTCTTTCTC 58.654 37.037 0.00 0.00 0.00 2.87
605 606 7.834681 ACCCTAACTTCTTTTTGTTCTCTTTCT 59.165 33.333 0.00 0.00 0.00 2.52
606 607 7.915923 CACCCTAACTTCTTTTTGTTCTCTTTC 59.084 37.037 0.00 0.00 0.00 2.62
616 617 4.750096 GCTCCTCCACCCTAACTTCTTTTT 60.750 45.833 0.00 0.00 0.00 1.94
621 622 1.066071 GTGCTCCTCCACCCTAACTTC 60.066 57.143 0.00 0.00 0.00 3.01
650 651 0.763652 CATGGATGGCACTCTAGGCT 59.236 55.000 0.00 0.00 34.73 4.58
700 708 6.103997 AGCATGGATATTGTTGCTCAAAAAG 58.896 36.000 0.00 0.00 41.38 2.27
757 765 2.567169 AGCCCAAAAAGCTATTTGACCC 59.433 45.455 1.56 0.00 41.73 4.46
814 822 6.705381 TGATGTTTAAGCCCATTTGAAGTTTG 59.295 34.615 0.00 0.00 0.00 2.93
832 840 2.255252 GTTGCGGCGCTGATGTTT 59.745 55.556 33.26 0.00 0.00 2.83
862 870 4.697756 TAGTGGTGTGGCTGCGGC 62.698 66.667 9.72 9.72 37.82 6.53
863 871 2.742372 GTAGTGGTGTGGCTGCGG 60.742 66.667 0.00 0.00 0.00 5.69
864 872 1.738099 GAGTAGTGGTGTGGCTGCG 60.738 63.158 0.00 0.00 0.00 5.18
865 873 0.035458 AAGAGTAGTGGTGTGGCTGC 59.965 55.000 0.00 0.00 0.00 5.25
867 875 0.977395 GGAAGAGTAGTGGTGTGGCT 59.023 55.000 0.00 0.00 0.00 4.75
871 879 3.692690 GAGAGAGGAAGAGTAGTGGTGT 58.307 50.000 0.00 0.00 0.00 4.16
873 881 2.306512 ACGAGAGAGGAAGAGTAGTGGT 59.693 50.000 0.00 0.00 0.00 4.16
874 882 2.940410 GACGAGAGAGGAAGAGTAGTGG 59.060 54.545 0.00 0.00 0.00 4.00
875 883 3.869065 AGACGAGAGAGGAAGAGTAGTG 58.131 50.000 0.00 0.00 0.00 2.74
876 884 3.118519 GGAGACGAGAGAGGAAGAGTAGT 60.119 52.174 0.00 0.00 0.00 2.73
878 886 2.171027 GGGAGACGAGAGAGGAAGAGTA 59.829 54.545 0.00 0.00 0.00 2.59
879 887 1.064979 GGGAGACGAGAGAGGAAGAGT 60.065 57.143 0.00 0.00 0.00 3.24
881 889 0.256464 GGGGAGACGAGAGAGGAAGA 59.744 60.000 0.00 0.00 0.00 2.87
882 890 0.753848 GGGGGAGACGAGAGAGGAAG 60.754 65.000 0.00 0.00 0.00 3.46
981 1005 2.151502 TGACTTGAGGCTAGGAGAGG 57.848 55.000 0.00 0.00 0.00 3.69
998 1022 1.916181 GGTCCTTCTTCTTCCCCATGA 59.084 52.381 0.00 0.00 0.00 3.07
1137 1161 2.507407 TTGAGATTACCTTGTGGGCC 57.493 50.000 0.00 0.00 39.10 5.80
1159 1183 1.373570 GCTCGCTACTTTGGCAGATT 58.626 50.000 0.00 0.00 0.00 2.40
1161 1185 1.446099 CGCTCGCTACTTTGGCAGA 60.446 57.895 0.00 0.00 0.00 4.26
1163 1187 2.434185 CCGCTCGCTACTTTGGCA 60.434 61.111 0.00 0.00 0.00 4.92
1188 1212 1.227263 CATTCCGGCCGAGAACGAT 60.227 57.895 30.73 10.69 42.66 3.73
1214 1238 0.040781 AACAAATTAACACGCGCGCT 60.041 45.000 32.58 17.52 0.00 5.92
1236 1260 0.394938 TGAGAACCTAGGCACGCAAA 59.605 50.000 9.30 0.00 0.00 3.68
1358 1382 1.087771 GCATGTACGTACCACCCTGC 61.088 60.000 22.43 17.55 0.00 4.85
1538 1668 1.300697 CCTAAGCCGGCGTATGTCC 60.301 63.158 22.55 0.00 0.00 4.02
1542 1672 1.457079 ACCTCCTAAGCCGGCGTAT 60.457 57.895 22.55 14.66 0.00 3.06
1543 1673 2.043652 ACCTCCTAAGCCGGCGTA 60.044 61.111 23.20 22.03 0.00 4.42
1544 1674 3.771160 CACCTCCTAAGCCGGCGT 61.771 66.667 23.20 22.12 0.00 5.68
1547 1677 3.458163 TCGCACCTCCTAAGCCGG 61.458 66.667 0.00 0.00 0.00 6.13
1548 1678 2.202756 GTCGCACCTCCTAAGCCG 60.203 66.667 0.00 0.00 0.00 5.52
1549 1679 2.202756 CGTCGCACCTCCTAAGCC 60.203 66.667 0.00 0.00 0.00 4.35
1550 1680 2.202756 CCGTCGCACCTCCTAAGC 60.203 66.667 0.00 0.00 0.00 3.09
1551 1681 2.005960 CTCCCGTCGCACCTCCTAAG 62.006 65.000 0.00 0.00 0.00 2.18
1552 1682 2.036098 TCCCGTCGCACCTCCTAA 59.964 61.111 0.00 0.00 0.00 2.69
1553 1683 2.439701 CTCCCGTCGCACCTCCTA 60.440 66.667 0.00 0.00 0.00 2.94
1585 1715 2.254350 GCCGGTGGAAAAGAACGC 59.746 61.111 1.90 0.00 0.00 4.84
1589 1719 1.294138 CTACGGCCGGTGGAAAAGA 59.706 57.895 31.76 1.50 0.00 2.52
1655 1785 2.560542 AGCTGTGACAACCTAGAGACAG 59.439 50.000 0.00 0.00 35.08 3.51
1658 1788 4.587262 TGTTAAGCTGTGACAACCTAGAGA 59.413 41.667 0.00 0.00 0.00 3.10
1683 1813 4.465886 ACTAGACGAATGCATAGAGGACT 58.534 43.478 0.00 0.00 0.00 3.85
1707 1837 7.624661 TGTAGTACTCATTCGTATACTTGACG 58.375 38.462 0.00 0.00 41.69 4.35
1710 1840 9.946165 TCATTGTAGTACTCATTCGTATACTTG 57.054 33.333 0.00 0.00 0.00 3.16
1716 1846 7.052248 TCTCCTCATTGTAGTACTCATTCGTA 58.948 38.462 0.00 0.00 0.00 3.43
1743 1873 1.413767 CGCCGTCGAAGGATGAACTG 61.414 60.000 22.33 0.00 38.10 3.16
1744 1874 1.153823 CGCCGTCGAAGGATGAACT 60.154 57.895 22.33 0.00 38.10 3.01
1800 1930 1.135888 CGTAAGTTTGCCGGCTTTACC 60.136 52.381 29.70 10.90 0.00 2.85
1801 1931 2.236741 CGTAAGTTTGCCGGCTTTAC 57.763 50.000 29.70 24.95 0.00 2.01
1825 1955 3.517100 ACATAGAGAGAGTGCACAATGGT 59.483 43.478 21.04 0.00 0.00 3.55
1826 1956 4.134379 ACATAGAGAGAGTGCACAATGG 57.866 45.455 21.04 0.86 0.00 3.16
1827 1957 4.934001 ACAACATAGAGAGAGTGCACAATG 59.066 41.667 21.04 12.10 0.00 2.82
1828 1958 5.157940 ACAACATAGAGAGAGTGCACAAT 57.842 39.130 21.04 6.57 0.00 2.71
1829 1959 4.039124 TGACAACATAGAGAGAGTGCACAA 59.961 41.667 21.04 0.00 0.00 3.33
1830 1960 3.573967 TGACAACATAGAGAGAGTGCACA 59.426 43.478 21.04 0.00 0.00 4.57
1831 1961 4.179926 TGACAACATAGAGAGAGTGCAC 57.820 45.455 9.40 9.40 0.00 4.57
1832 1962 4.382362 CCATGACAACATAGAGAGAGTGCA 60.382 45.833 0.00 0.00 35.09 4.57
1833 1963 4.118410 CCATGACAACATAGAGAGAGTGC 58.882 47.826 0.00 0.00 35.09 4.40
1834 1964 4.118410 GCCATGACAACATAGAGAGAGTG 58.882 47.826 0.00 0.00 35.09 3.51
1835 1965 3.771479 TGCCATGACAACATAGAGAGAGT 59.229 43.478 0.00 0.00 35.09 3.24
1836 1966 4.397481 TGCCATGACAACATAGAGAGAG 57.603 45.455 0.00 0.00 35.09 3.20
1837 1967 6.127083 TGTTATGCCATGACAACATAGAGAGA 60.127 38.462 0.00 0.00 35.09 3.10
1838 1968 6.018425 GTGTTATGCCATGACAACATAGAGAG 60.018 42.308 3.62 0.00 33.79 3.20
1839 1969 5.817296 GTGTTATGCCATGACAACATAGAGA 59.183 40.000 3.62 0.00 33.79 3.10
1840 1970 5.585844 TGTGTTATGCCATGACAACATAGAG 59.414 40.000 3.62 0.00 33.79 2.43
1841 1971 5.353956 GTGTGTTATGCCATGACAACATAGA 59.646 40.000 3.62 0.00 33.79 1.98
1842 1972 5.355071 AGTGTGTTATGCCATGACAACATAG 59.645 40.000 3.62 0.00 33.79 2.23
1843 1973 5.123661 CAGTGTGTTATGCCATGACAACATA 59.876 40.000 3.62 0.00 33.79 2.29
1844 1974 4.081406 AGTGTGTTATGCCATGACAACAT 58.919 39.130 3.62 0.00 33.79 2.71
1845 1975 3.252944 CAGTGTGTTATGCCATGACAACA 59.747 43.478 3.62 2.88 30.13 3.33
1846 1976 3.825308 CAGTGTGTTATGCCATGACAAC 58.175 45.455 3.62 5.57 30.13 3.32
1847 1977 2.228582 GCAGTGTGTTATGCCATGACAA 59.771 45.455 3.62 0.00 36.41 3.18
1848 1978 1.811965 GCAGTGTGTTATGCCATGACA 59.188 47.619 0.00 0.00 36.41 3.58
1849 1979 2.086869 AGCAGTGTGTTATGCCATGAC 58.913 47.619 0.00 0.00 43.60 3.06
1850 1980 2.026915 AGAGCAGTGTGTTATGCCATGA 60.027 45.455 0.00 0.00 43.60 3.07
1851 1981 2.362736 AGAGCAGTGTGTTATGCCATG 58.637 47.619 0.00 0.00 43.60 3.66
1852 1982 2.795231 AGAGCAGTGTGTTATGCCAT 57.205 45.000 0.00 0.00 43.60 4.40
1853 1983 3.534554 CATAGAGCAGTGTGTTATGCCA 58.465 45.455 0.00 0.00 43.60 4.92
1854 1984 2.289002 GCATAGAGCAGTGTGTTATGCC 59.711 50.000 17.03 6.30 43.60 4.40
1855 1985 3.599046 GCATAGAGCAGTGTGTTATGC 57.401 47.619 14.59 14.59 44.79 3.14
1867 1997 2.333014 GCCTAGACGAATGCATAGAGC 58.667 52.381 0.00 0.00 45.96 4.09
1868 1998 2.669670 CGGCCTAGACGAATGCATAGAG 60.670 54.545 0.00 0.00 35.20 2.43
1869 1999 1.269723 CGGCCTAGACGAATGCATAGA 59.730 52.381 0.00 0.00 35.20 1.98
1870 2000 1.000163 ACGGCCTAGACGAATGCATAG 60.000 52.381 0.00 0.00 35.20 2.23
1871 2001 1.037493 ACGGCCTAGACGAATGCATA 58.963 50.000 0.00 0.00 35.20 3.14
1872 2002 0.530650 CACGGCCTAGACGAATGCAT 60.531 55.000 12.69 0.00 35.20 3.96
1873 2003 1.153647 CACGGCCTAGACGAATGCA 60.154 57.895 12.69 0.00 35.20 3.96
1874 2004 0.459585 TTCACGGCCTAGACGAATGC 60.460 55.000 12.69 0.00 35.20 3.56
1875 2005 2.004583 TTTCACGGCCTAGACGAATG 57.995 50.000 12.69 3.28 35.20 2.67
1876 2006 2.981859 ATTTCACGGCCTAGACGAAT 57.018 45.000 12.69 0.00 35.20 3.34
1877 2007 4.555313 CGTATATTTCACGGCCTAGACGAA 60.555 45.833 8.45 0.00 35.20 3.85
1878 2008 3.058708 CGTATATTTCACGGCCTAGACGA 60.059 47.826 8.45 0.00 35.20 4.20
1879 2009 3.058708 TCGTATATTTCACGGCCTAGACG 60.059 47.826 0.00 4.64 41.40 4.18
1880 2010 4.494350 TCGTATATTTCACGGCCTAGAC 57.506 45.455 0.00 0.00 39.82 2.59
1881 2011 5.242171 TCATTCGTATATTTCACGGCCTAGA 59.758 40.000 0.00 0.00 39.82 2.43
1882 2012 5.466819 TCATTCGTATATTTCACGGCCTAG 58.533 41.667 0.00 0.00 39.82 3.02
1883 2013 5.010314 ACTCATTCGTATATTTCACGGCCTA 59.990 40.000 0.00 0.00 39.82 3.93
1884 2014 4.202223 ACTCATTCGTATATTTCACGGCCT 60.202 41.667 0.00 0.00 39.82 5.19
1885 2015 4.056050 ACTCATTCGTATATTTCACGGCC 58.944 43.478 0.00 0.00 39.82 6.13
1886 2016 5.919141 AGTACTCATTCGTATATTTCACGGC 59.081 40.000 0.00 0.00 39.82 5.68
1887 2017 8.071967 TGTAGTACTCATTCGTATATTTCACGG 58.928 37.037 0.00 0.00 39.82 4.94
1888 2018 8.889975 GTGTAGTACTCATTCGTATATTTCACG 58.110 37.037 0.00 0.00 40.72 4.35
1889 2019 9.947669 AGTGTAGTACTCATTCGTATATTTCAC 57.052 33.333 0.00 0.00 33.17 3.18
1890 2020 9.946165 CAGTGTAGTACTCATTCGTATATTTCA 57.054 33.333 0.00 0.00 37.60 2.69
1893 2023 8.784994 CCTCAGTGTAGTACTCATTCGTATATT 58.215 37.037 0.00 0.00 37.60 1.28
1894 2024 8.155510 TCCTCAGTGTAGTACTCATTCGTATAT 58.844 37.037 0.00 0.00 37.60 0.86
1895 2025 7.503549 TCCTCAGTGTAGTACTCATTCGTATA 58.496 38.462 0.00 0.00 37.60 1.47
1896 2026 6.354938 TCCTCAGTGTAGTACTCATTCGTAT 58.645 40.000 0.00 0.00 37.60 3.06
1897 2027 5.737860 TCCTCAGTGTAGTACTCATTCGTA 58.262 41.667 0.00 0.00 37.60 3.43
1898 2028 4.586884 TCCTCAGTGTAGTACTCATTCGT 58.413 43.478 0.00 0.00 37.60 3.85
1899 2029 4.876679 TCTCCTCAGTGTAGTACTCATTCG 59.123 45.833 0.00 0.00 37.60 3.34
1900 2030 6.376018 AGTTCTCCTCAGTGTAGTACTCATTC 59.624 42.308 0.00 0.00 37.60 2.67
1901 2031 6.151985 CAGTTCTCCTCAGTGTAGTACTCATT 59.848 42.308 0.00 0.00 37.60 2.57
1902 2032 5.650266 CAGTTCTCCTCAGTGTAGTACTCAT 59.350 44.000 0.00 0.00 37.60 2.90
1903 2033 5.004448 CAGTTCTCCTCAGTGTAGTACTCA 58.996 45.833 0.00 0.00 37.60 3.41
1904 2034 5.005094 ACAGTTCTCCTCAGTGTAGTACTC 58.995 45.833 0.00 0.00 37.60 2.59
1905 2035 4.988029 ACAGTTCTCCTCAGTGTAGTACT 58.012 43.478 0.00 0.00 41.36 2.73
1906 2036 5.241064 TGAACAGTTCTCCTCAGTGTAGTAC 59.759 44.000 14.51 0.00 0.00 2.73
1907 2037 5.382616 TGAACAGTTCTCCTCAGTGTAGTA 58.617 41.667 14.51 0.00 0.00 1.82
1908 2038 4.215908 TGAACAGTTCTCCTCAGTGTAGT 58.784 43.478 14.51 0.00 0.00 2.73
1909 2039 4.855715 TGAACAGTTCTCCTCAGTGTAG 57.144 45.455 14.51 0.00 0.00 2.74
1910 2040 4.832823 TGATGAACAGTTCTCCTCAGTGTA 59.167 41.667 14.51 0.00 0.00 2.90
1911 2041 3.643320 TGATGAACAGTTCTCCTCAGTGT 59.357 43.478 14.51 0.00 0.00 3.55
1912 2042 4.263018 TGATGAACAGTTCTCCTCAGTG 57.737 45.455 14.51 0.00 0.00 3.66
1913 2043 5.486526 GAATGATGAACAGTTCTCCTCAGT 58.513 41.667 14.51 12.64 0.00 3.41
1914 2044 4.565962 CGAATGATGAACAGTTCTCCTCAG 59.434 45.833 14.51 1.21 0.00 3.35
1915 2045 4.220602 TCGAATGATGAACAGTTCTCCTCA 59.779 41.667 14.51 13.60 0.00 3.86
1916 2046 4.564769 GTCGAATGATGAACAGTTCTCCTC 59.435 45.833 14.51 8.95 0.00 3.71
1917 2047 4.499183 GTCGAATGATGAACAGTTCTCCT 58.501 43.478 14.51 0.00 0.00 3.69
1918 2048 3.304559 CGTCGAATGATGAACAGTTCTCC 59.695 47.826 14.51 6.69 32.56 3.71
1919 2049 3.304559 CCGTCGAATGATGAACAGTTCTC 59.695 47.826 14.51 9.65 32.56 2.87
1920 2050 3.254060 CCGTCGAATGATGAACAGTTCT 58.746 45.455 14.51 0.19 32.56 3.01
1921 2051 2.222819 GCCGTCGAATGATGAACAGTTC 60.223 50.000 6.32 6.32 32.56 3.01
1922 2052 1.732259 GCCGTCGAATGATGAACAGTT 59.268 47.619 0.00 0.00 32.56 3.16
1923 2053 1.359848 GCCGTCGAATGATGAACAGT 58.640 50.000 0.00 0.00 32.56 3.55
1924 2054 0.298707 CGCCGTCGAATGATGAACAG 59.701 55.000 0.00 0.00 38.10 3.16
1925 2055 0.109039 TCGCCGTCGAATGATGAACA 60.109 50.000 0.00 0.00 42.44 3.18
1926 2056 0.572590 CTCGCCGTCGAATGATGAAC 59.427 55.000 0.00 0.00 44.98 3.18
1927 2057 1.145759 GCTCGCCGTCGAATGATGAA 61.146 55.000 0.00 0.00 44.98 2.57
1928 2058 1.588932 GCTCGCCGTCGAATGATGA 60.589 57.895 0.00 0.00 44.98 2.92
1929 2059 2.589492 GGCTCGCCGTCGAATGATG 61.589 63.158 0.00 0.00 44.98 3.07
1930 2060 2.279517 GGCTCGCCGTCGAATGAT 60.280 61.111 0.00 0.00 44.98 2.45
1931 2061 2.572095 AATGGCTCGCCGTCGAATGA 62.572 55.000 2.65 0.00 44.98 2.57
1932 2062 2.094126 GAATGGCTCGCCGTCGAATG 62.094 60.000 2.65 0.00 44.98 2.67
1933 2063 1.883084 GAATGGCTCGCCGTCGAAT 60.883 57.895 2.65 0.00 44.98 3.34
1934 2064 2.508439 GAATGGCTCGCCGTCGAA 60.508 61.111 2.65 0.00 44.98 3.71
1935 2065 3.449227 AGAATGGCTCGCCGTCGA 61.449 61.111 2.65 0.00 43.28 4.20
1936 2066 3.257561 CAGAATGGCTCGCCGTCG 61.258 66.667 2.65 0.00 39.42 5.12
1937 2067 3.567797 GCAGAATGGCTCGCCGTC 61.568 66.667 2.65 3.36 39.42 4.79
1946 2076 2.438434 GTCGGTGGGGCAGAATGG 60.438 66.667 0.00 0.00 35.86 3.16
1947 2077 2.438434 GGTCGGTGGGGCAGAATG 60.438 66.667 0.00 0.00 40.87 2.67
1948 2078 0.986019 TATGGTCGGTGGGGCAGAAT 60.986 55.000 0.00 0.00 0.00 2.40
1949 2079 1.613928 TATGGTCGGTGGGGCAGAA 60.614 57.895 0.00 0.00 0.00 3.02
1950 2080 2.039787 TATGGTCGGTGGGGCAGA 59.960 61.111 0.00 0.00 0.00 4.26
1951 2081 2.505982 CTATGGTCGGTGGGGCAG 59.494 66.667 0.00 0.00 0.00 4.85
1952 2082 3.792736 GCTATGGTCGGTGGGGCA 61.793 66.667 0.00 0.00 0.00 5.36
1953 2083 3.792736 TGCTATGGTCGGTGGGGC 61.793 66.667 0.00 0.00 0.00 5.80
1954 2084 2.189521 GTGCTATGGTCGGTGGGG 59.810 66.667 0.00 0.00 0.00 4.96
1955 2085 1.910580 AAGGTGCTATGGTCGGTGGG 61.911 60.000 0.00 0.00 0.00 4.61
1956 2086 0.462047 GAAGGTGCTATGGTCGGTGG 60.462 60.000 0.00 0.00 0.00 4.61
1957 2087 0.249120 TGAAGGTGCTATGGTCGGTG 59.751 55.000 0.00 0.00 0.00 4.94
1958 2088 0.981183 TTGAAGGTGCTATGGTCGGT 59.019 50.000 0.00 0.00 0.00 4.69
1959 2089 1.207089 TCTTGAAGGTGCTATGGTCGG 59.793 52.381 0.00 0.00 0.00 4.79
1960 2090 2.672961 TCTTGAAGGTGCTATGGTCG 57.327 50.000 0.00 0.00 0.00 4.79
1961 2091 3.209410 CCATCTTGAAGGTGCTATGGTC 58.791 50.000 0.00 0.00 31.28 4.02
1962 2092 2.578021 ACCATCTTGAAGGTGCTATGGT 59.422 45.455 9.06 9.06 41.67 3.55
1963 2093 3.287867 ACCATCTTGAAGGTGCTATGG 57.712 47.619 0.00 4.22 39.80 2.74
1964 2094 5.220931 GCTTTACCATCTTGAAGGTGCTATG 60.221 44.000 0.00 0.00 38.87 2.23
1965 2095 4.884164 GCTTTACCATCTTGAAGGTGCTAT 59.116 41.667 0.00 0.00 38.87 2.97
1966 2096 4.261801 GCTTTACCATCTTGAAGGTGCTA 58.738 43.478 0.00 0.00 38.87 3.49
1967 2097 3.084786 GCTTTACCATCTTGAAGGTGCT 58.915 45.455 0.00 0.00 38.87 4.40
1968 2098 2.164422 GGCTTTACCATCTTGAAGGTGC 59.836 50.000 0.00 3.22 38.87 5.01
1969 2099 2.420022 CGGCTTTACCATCTTGAAGGTG 59.580 50.000 7.68 0.00 38.87 4.00
1970 2100 2.618045 CCGGCTTTACCATCTTGAAGGT 60.618 50.000 3.04 3.04 41.89 3.50
1971 2101 2.017049 CCGGCTTTACCATCTTGAAGG 58.983 52.381 0.00 0.00 39.03 3.46
1972 2102 1.401905 GCCGGCTTTACCATCTTGAAG 59.598 52.381 22.15 0.00 39.03 3.02
1973 2103 1.459450 GCCGGCTTTACCATCTTGAA 58.541 50.000 22.15 0.00 39.03 2.69
1974 2104 0.393808 GGCCGGCTTTACCATCTTGA 60.394 55.000 28.56 0.00 39.03 3.02
1975 2105 0.679640 TGGCCGGCTTTACCATCTTG 60.680 55.000 28.56 0.00 39.03 3.02
1976 2106 0.039035 TTGGCCGGCTTTACCATCTT 59.961 50.000 28.56 0.00 39.03 2.40
1977 2107 0.679960 GTTGGCCGGCTTTACCATCT 60.680 55.000 28.56 0.00 39.03 2.90
1978 2108 0.679960 AGTTGGCCGGCTTTACCATC 60.680 55.000 28.56 14.01 39.03 3.51
1979 2109 0.251608 AAGTTGGCCGGCTTTACCAT 60.252 50.000 28.56 10.70 39.03 3.55
1980 2110 0.891904 GAAGTTGGCCGGCTTTACCA 60.892 55.000 28.56 12.88 39.03 3.25
2030 2160 3.532542 GTGAGTAACTCTGGCATTACCC 58.467 50.000 5.99 0.00 37.83 3.69
2041 2171 5.706916 TCAGTGTTAATCCGTGAGTAACTC 58.293 41.667 18.34 15.87 41.64 3.01
2144 2274 0.175760 GTCATCCTGCACGCCTTCTA 59.824 55.000 0.00 0.00 0.00 2.10
2195 2325 1.133730 GGTCACCACAAACCCTGGTAA 60.134 52.381 0.00 0.00 40.25 2.85
2247 2377 5.146460 CAATCATCGTATTTTGCATACGGG 58.854 41.667 16.06 10.22 45.13 5.28
2274 2691 2.617788 GCCATAGTTGTGATCACCACCA 60.618 50.000 22.68 12.72 45.09 4.17
2339 2882 0.718343 AGCGTCGTCGTAGTAGTCAC 59.282 55.000 3.66 0.00 39.49 3.67
2525 3068 4.794246 CGAAGCTAGCTACGATAATTAGGC 59.206 45.833 19.70 0.00 0.00 3.93
2690 3240 6.144402 CACATCAAACAGATTGCCAAACTTAC 59.856 38.462 0.00 0.00 38.98 2.34
2698 3248 2.170166 TCCCACATCAAACAGATTGCC 58.830 47.619 0.00 0.00 38.98 4.52
2701 3251 6.295462 CCAGAAAATCCCACATCAAACAGATT 60.295 38.462 0.00 0.00 33.72 2.40
2757 3307 4.100189 CCCTCATAAACAGGACTAGGACAG 59.900 50.000 0.00 0.00 31.91 3.51
2794 3344 1.026718 AAGTGCGCATTGGCTAGACC 61.027 55.000 15.91 0.00 38.10 3.85
2828 3390 5.508567 TCTATGGAATCAGTGGAAAATGCA 58.491 37.500 0.00 0.00 0.00 3.96
2829 3391 6.127647 TGTTCTATGGAATCAGTGGAAAATGC 60.128 38.462 0.00 0.00 33.71 3.56
3112 6767 7.039882 CGAATTTAAAACAGAGCTAGGGAGTA 58.960 38.462 0.00 0.00 0.00 2.59
3169 6824 6.708949 TGTTAGTACCTTCACATGTCCTTTTC 59.291 38.462 0.00 0.00 0.00 2.29
3250 6905 1.104577 GCGGTGGTTGTTTCTTCCCA 61.105 55.000 0.00 0.00 0.00 4.37
3304 6962 6.290605 ACAAAAACATTTGCCAAGCTAGAAT 58.709 32.000 0.00 0.00 35.42 2.40
3333 6991 0.603975 GAGAGGGCCGGACATTATGC 60.604 60.000 11.00 0.00 0.00 3.14
3334 6992 0.035458 GGAGAGGGCCGGACATTATG 59.965 60.000 11.00 0.00 0.00 1.90
3343 7001 1.265454 ACTTACAAGGGAGAGGGCCG 61.265 60.000 0.00 0.00 0.00 6.13
3345 7003 0.984995 ACACTTACAAGGGAGAGGGC 59.015 55.000 0.00 0.00 32.48 5.19
3351 7009 5.051816 CGACTTTACAACACTTACAAGGGA 58.948 41.667 0.00 0.00 32.48 4.20
3353 7011 4.812626 ACCGACTTTACAACACTTACAAGG 59.187 41.667 0.00 0.00 0.00 3.61
3354 7012 5.521010 TGACCGACTTTACAACACTTACAAG 59.479 40.000 0.00 0.00 0.00 3.16
3355 7013 5.417811 TGACCGACTTTACAACACTTACAA 58.582 37.500 0.00 0.00 0.00 2.41
3356 7014 5.008619 TGACCGACTTTACAACACTTACA 57.991 39.130 0.00 0.00 0.00 2.41
3371 7029 3.190874 GTCTCCAGAATTCATGACCGAC 58.809 50.000 8.44 4.89 0.00 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.