Multiple sequence alignment - TraesCS1D01G399900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G399900 chr1D 100.000 3776 0 0 1 3776 466389390 466385615 0.000000e+00 6974
1 TraesCS1D01G399900 chr1D 97.525 202 4 1 1 202 466394503 466394303 1.000000e-90 344
2 TraesCS1D01G399900 chr1D 97.475 198 5 0 1 198 2725206 2725009 4.670000e-89 339
3 TraesCS1D01G399900 chr1D 96.040 202 7 1 1 202 2730318 2730118 1.010000e-85 327
4 TraesCS1D01G399900 chr1B 89.738 1491 151 2 1283 2772 643119562 643118073 0.000000e+00 1905
5 TraesCS1D01G399900 chr1B 91.228 456 18 4 3328 3773 643114792 643114349 5.400000e-168 601
6 TraesCS1D01G399900 chr1B 88.110 471 56 0 2776 3246 643115264 643114794 9.160000e-156 560
7 TraesCS1D01G399900 chr1B 80.340 529 62 21 327 828 643120788 643120275 2.770000e-96 363
8 TraesCS1D01G399900 chr1B 90.385 104 7 2 199 301 643121015 643120914 2.370000e-27 134
9 TraesCS1D01G399900 chr1A 87.609 1493 179 6 1283 2772 558541425 558539936 0.000000e+00 1727
10 TraesCS1D01G399900 chr1A 93.465 1010 55 3 2776 3775 558539553 558538545 0.000000e+00 1489
11 TraesCS1D01G399900 chr1A 93.274 223 14 1 652 874 558542167 558541946 1.010000e-85 327
12 TraesCS1D01G399900 chr3B 78.061 588 119 9 3034 3616 22438330 22438912 2.770000e-96 363
13 TraesCS1D01G399900 chr6D 98.515 202 2 1 1 202 297457844 297458044 4.640000e-94 355
14 TraesCS1D01G399900 chr6D 96.465 198 3 1 1 198 297462957 297463150 1.310000e-84 324
15 TraesCS1D01G399900 chr6D 73.375 954 219 25 1431 2365 463079805 463078868 4.710000e-84 322
16 TraesCS1D01G399900 chr6B 74.161 894 206 15 1483 2365 706443733 706442854 7.760000e-92 348
17 TraesCS1D01G399900 chr6B 73.996 896 208 16 1481 2365 706528780 706527899 1.300000e-89 340
18 TraesCS1D01G399900 chr6B 85.514 214 31 0 1432 1645 11742952 11743165 1.360000e-54 224
19 TraesCS1D01G399900 chr6B 84.259 216 30 3 1432 1645 11613236 11613449 1.370000e-49 207
20 TraesCS1D01G399900 chr4D 96.985 199 5 1 1 198 40033272 40033074 2.170000e-87 333
21 TraesCS1D01G399900 chr4D 96.535 202 5 2 1 202 449835922 449836121 2.170000e-87 333
22 TraesCS1D01G399900 chr4D 96.465 198 7 0 1 198 449850225 449850422 1.010000e-85 327
23 TraesCS1D01G399900 chr7D 95.980 199 7 1 1 198 135256375 135256177 4.710000e-84 322
24 TraesCS1D01G399900 chr6A 72.851 954 224 25 1431 2365 609821286 609820349 1.030000e-75 294


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G399900 chr1D 466385615 466389390 3775 True 6974.0 6974 100.000000 1 3776 1 chr1D.!!$R3 3775
1 TraesCS1D01G399900 chr1B 643114349 643121015 6666 True 712.6 1905 87.960200 199 3773 5 chr1B.!!$R1 3574
2 TraesCS1D01G399900 chr1A 558538545 558542167 3622 True 1181.0 1727 91.449333 652 3775 3 chr1A.!!$R1 3123
3 TraesCS1D01G399900 chr3B 22438330 22438912 582 False 363.0 363 78.061000 3034 3616 1 chr3B.!!$F1 582
4 TraesCS1D01G399900 chr6D 463078868 463079805 937 True 322.0 322 73.375000 1431 2365 1 chr6D.!!$R1 934
5 TraesCS1D01G399900 chr6B 706442854 706443733 879 True 348.0 348 74.161000 1483 2365 1 chr6B.!!$R1 882
6 TraesCS1D01G399900 chr6B 706527899 706528780 881 True 340.0 340 73.996000 1481 2365 1 chr6B.!!$R2 884
7 TraesCS1D01G399900 chr6A 609820349 609821286 937 True 294.0 294 72.851000 1431 2365 1 chr6A.!!$R1 934

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
90 91 0.103208 CCACTACCGCTGAGACCATC 59.897 60.0 0.0 0.0 0.00 3.51 F
101 102 0.179081 GAGACCATCAGGCCCGTTAC 60.179 60.0 0.0 0.0 39.06 2.50 F
1674 2143 0.036765 TGTCAGGTTCGATTTCCCCG 60.037 55.0 0.0 0.0 0.00 5.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1131 1438 0.254154 TCAGGAGGAGGGAGTAGGGA 60.254 60.0 0.0 0.0 0.0 4.2 R
2056 2525 0.326927 CCACCGAGTACCAAACCCAT 59.673 55.0 0.0 0.0 0.0 4.0 R
3028 6308 0.110486 TCTTCTTGGTGTCTTGGCCC 59.890 55.0 0.0 0.0 0.0 5.8 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.069318 ACCGTTCTCTCCCTCGCC 61.069 66.667 0.00 0.00 0.00 5.54
18 19 3.839432 CCGTTCTCTCCCTCGCCC 61.839 72.222 0.00 0.00 0.00 6.13
19 20 3.068691 CGTTCTCTCCCTCGCCCA 61.069 66.667 0.00 0.00 0.00 5.36
20 21 2.579738 GTTCTCTCCCTCGCCCAC 59.420 66.667 0.00 0.00 0.00 4.61
21 22 2.683933 TTCTCTCCCTCGCCCACC 60.684 66.667 0.00 0.00 0.00 4.61
22 23 3.239627 TTCTCTCCCTCGCCCACCT 62.240 63.158 0.00 0.00 0.00 4.00
23 24 3.465403 CTCTCCCTCGCCCACCTG 61.465 72.222 0.00 0.00 0.00 4.00
27 28 3.399181 CCCTCGCCCACCTGCTTA 61.399 66.667 0.00 0.00 0.00 3.09
28 29 2.746375 CCCTCGCCCACCTGCTTAT 61.746 63.158 0.00 0.00 0.00 1.73
29 30 1.407656 CCCTCGCCCACCTGCTTATA 61.408 60.000 0.00 0.00 0.00 0.98
30 31 0.468226 CCTCGCCCACCTGCTTATAA 59.532 55.000 0.00 0.00 0.00 0.98
31 32 1.583054 CTCGCCCACCTGCTTATAAC 58.417 55.000 0.00 0.00 0.00 1.89
32 33 0.179468 TCGCCCACCTGCTTATAACC 59.821 55.000 0.00 0.00 0.00 2.85
33 34 0.818040 CGCCCACCTGCTTATAACCC 60.818 60.000 0.00 0.00 0.00 4.11
34 35 0.818040 GCCCACCTGCTTATAACCCG 60.818 60.000 0.00 0.00 0.00 5.28
35 36 0.818040 CCCACCTGCTTATAACCCGC 60.818 60.000 0.00 0.00 0.00 6.13
36 37 0.107410 CCACCTGCTTATAACCCGCA 60.107 55.000 0.00 0.00 0.00 5.69
56 57 1.954927 GGACACATAGGCCTACTTGC 58.045 55.000 16.61 10.68 44.70 4.01
57 58 1.486726 GGACACATAGGCCTACTTGCT 59.513 52.381 16.61 6.01 44.70 3.91
58 59 2.698797 GGACACATAGGCCTACTTGCTA 59.301 50.000 16.61 0.00 44.70 3.49
59 60 3.492829 GGACACATAGGCCTACTTGCTAC 60.493 52.174 16.61 9.78 44.70 3.58
60 61 2.100916 ACACATAGGCCTACTTGCTACG 59.899 50.000 16.61 3.21 0.00 3.51
61 62 1.687123 ACATAGGCCTACTTGCTACGG 59.313 52.381 16.61 0.00 0.00 4.02
62 63 0.680061 ATAGGCCTACTTGCTACGGC 59.320 55.000 16.61 0.00 41.75 5.68
63 64 0.396695 TAGGCCTACTTGCTACGGCT 60.397 55.000 8.91 0.00 42.13 5.52
64 65 1.227292 GGCCTACTTGCTACGGCTC 60.227 63.158 0.00 0.00 42.13 4.70
65 66 1.677637 GGCCTACTTGCTACGGCTCT 61.678 60.000 0.00 0.00 42.13 4.09
66 67 0.249114 GCCTACTTGCTACGGCTCTC 60.249 60.000 0.00 0.00 39.42 3.20
67 68 1.394618 CCTACTTGCTACGGCTCTCT 58.605 55.000 0.00 0.00 39.59 3.10
68 69 1.066303 CCTACTTGCTACGGCTCTCTG 59.934 57.143 0.00 0.00 39.59 3.35
69 70 1.066303 CTACTTGCTACGGCTCTCTGG 59.934 57.143 0.00 0.00 39.59 3.86
70 71 1.520342 CTTGCTACGGCTCTCTGGC 60.520 63.158 0.00 0.00 39.59 4.85
77 78 2.904131 GGCTCTCTGGCCCACTAC 59.096 66.667 0.00 0.00 45.92 2.73
78 79 2.736826 GGCTCTCTGGCCCACTACC 61.737 68.421 0.00 0.00 45.92 3.18
79 80 3.082579 GCTCTCTGGCCCACTACCG 62.083 68.421 0.00 0.00 0.00 4.02
80 81 3.075005 TCTCTGGCCCACTACCGC 61.075 66.667 0.00 0.00 0.00 5.68
81 82 3.077556 CTCTGGCCCACTACCGCT 61.078 66.667 0.00 0.00 0.00 5.52
82 83 3.376935 CTCTGGCCCACTACCGCTG 62.377 68.421 0.00 0.00 0.00 5.18
83 84 3.390521 CTGGCCCACTACCGCTGA 61.391 66.667 0.00 0.00 0.00 4.26
84 85 3.376935 CTGGCCCACTACCGCTGAG 62.377 68.421 0.00 0.00 0.00 3.35
85 86 3.075005 GGCCCACTACCGCTGAGA 61.075 66.667 0.00 0.00 0.00 3.27
86 87 2.184579 GCCCACTACCGCTGAGAC 59.815 66.667 0.00 0.00 0.00 3.36
87 88 2.893398 CCCACTACCGCTGAGACC 59.107 66.667 0.00 0.00 0.00 3.85
88 89 1.982395 CCCACTACCGCTGAGACCA 60.982 63.158 0.00 0.00 0.00 4.02
89 90 1.330655 CCCACTACCGCTGAGACCAT 61.331 60.000 0.00 0.00 0.00 3.55
90 91 0.103208 CCACTACCGCTGAGACCATC 59.897 60.000 0.00 0.00 0.00 3.51
91 92 0.817654 CACTACCGCTGAGACCATCA 59.182 55.000 0.00 0.00 36.21 3.07
98 99 2.284625 TGAGACCATCAGGCCCGT 60.285 61.111 0.00 0.00 39.06 5.28
99 100 1.918293 TGAGACCATCAGGCCCGTT 60.918 57.895 0.00 0.00 39.06 4.44
100 101 0.616395 TGAGACCATCAGGCCCGTTA 60.616 55.000 0.00 0.00 39.06 3.18
101 102 0.179081 GAGACCATCAGGCCCGTTAC 60.179 60.000 0.00 0.00 39.06 2.50
102 103 0.907704 AGACCATCAGGCCCGTTACA 60.908 55.000 0.00 0.00 39.06 2.41
103 104 0.180406 GACCATCAGGCCCGTTACAT 59.820 55.000 0.00 0.00 39.06 2.29
104 105 1.414919 GACCATCAGGCCCGTTACATA 59.585 52.381 0.00 0.00 39.06 2.29
105 106 2.038557 GACCATCAGGCCCGTTACATAT 59.961 50.000 0.00 0.00 39.06 1.78
106 107 2.441750 ACCATCAGGCCCGTTACATATT 59.558 45.455 0.00 0.00 39.06 1.28
107 108 3.117663 ACCATCAGGCCCGTTACATATTT 60.118 43.478 0.00 0.00 39.06 1.40
108 109 3.253188 CCATCAGGCCCGTTACATATTTG 59.747 47.826 0.00 0.00 0.00 2.32
109 110 3.916359 TCAGGCCCGTTACATATTTGA 57.084 42.857 0.00 0.00 0.00 2.69
110 111 4.223556 TCAGGCCCGTTACATATTTGAA 57.776 40.909 0.00 0.00 0.00 2.69
111 112 3.942748 TCAGGCCCGTTACATATTTGAAC 59.057 43.478 0.00 0.00 0.00 3.18
112 113 3.945285 CAGGCCCGTTACATATTTGAACT 59.055 43.478 0.00 0.00 0.00 3.01
113 114 4.398044 CAGGCCCGTTACATATTTGAACTT 59.602 41.667 0.00 0.00 0.00 2.66
114 115 4.638865 AGGCCCGTTACATATTTGAACTTC 59.361 41.667 0.00 0.00 0.00 3.01
115 116 4.201980 GGCCCGTTACATATTTGAACTTCC 60.202 45.833 0.00 0.00 0.00 3.46
116 117 4.201980 GCCCGTTACATATTTGAACTTCCC 60.202 45.833 0.00 0.00 0.00 3.97
117 118 4.034742 CCCGTTACATATTTGAACTTCCCG 59.965 45.833 0.00 0.00 0.00 5.14
118 119 4.495184 CCGTTACATATTTGAACTTCCCGC 60.495 45.833 0.00 0.00 0.00 6.13
119 120 4.331717 CGTTACATATTTGAACTTCCCGCT 59.668 41.667 0.00 0.00 0.00 5.52
120 121 5.521010 CGTTACATATTTGAACTTCCCGCTA 59.479 40.000 0.00 0.00 0.00 4.26
121 122 6.509039 CGTTACATATTTGAACTTCCCGCTAC 60.509 42.308 0.00 0.00 0.00 3.58
122 123 4.839121 ACATATTTGAACTTCCCGCTACA 58.161 39.130 0.00 0.00 0.00 2.74
123 124 4.634443 ACATATTTGAACTTCCCGCTACAC 59.366 41.667 0.00 0.00 0.00 2.90
124 125 1.886886 TTTGAACTTCCCGCTACACC 58.113 50.000 0.00 0.00 0.00 4.16
125 126 1.053424 TTGAACTTCCCGCTACACCT 58.947 50.000 0.00 0.00 0.00 4.00
126 127 1.053424 TGAACTTCCCGCTACACCTT 58.947 50.000 0.00 0.00 0.00 3.50
127 128 2.250031 TGAACTTCCCGCTACACCTTA 58.750 47.619 0.00 0.00 0.00 2.69
128 129 2.028748 TGAACTTCCCGCTACACCTTAC 60.029 50.000 0.00 0.00 0.00 2.34
129 130 0.529378 ACTTCCCGCTACACCTTACG 59.471 55.000 0.00 0.00 0.00 3.18
130 131 0.804933 CTTCCCGCTACACCTTACGC 60.805 60.000 0.00 0.00 0.00 4.42
131 132 2.202837 CCCGCTACACCTTACGCC 60.203 66.667 0.00 0.00 0.00 5.68
132 133 2.718073 CCCGCTACACCTTACGCCT 61.718 63.158 0.00 0.00 0.00 5.52
133 134 1.217244 CCGCTACACCTTACGCCTT 59.783 57.895 0.00 0.00 0.00 4.35
134 135 0.804933 CCGCTACACCTTACGCCTTC 60.805 60.000 0.00 0.00 0.00 3.46
135 136 1.138047 CGCTACACCTTACGCCTTCG 61.138 60.000 0.00 0.00 42.43 3.79
136 137 1.419107 GCTACACCTTACGCCTTCGC 61.419 60.000 0.00 0.00 39.84 4.70
137 138 0.804933 CTACACCTTACGCCTTCGCC 60.805 60.000 0.00 0.00 39.84 5.54
138 139 1.252904 TACACCTTACGCCTTCGCCT 61.253 55.000 0.00 0.00 39.84 5.52
139 140 1.375523 CACCTTACGCCTTCGCCTT 60.376 57.895 0.00 0.00 39.84 4.35
140 141 1.375523 ACCTTACGCCTTCGCCTTG 60.376 57.895 0.00 0.00 39.84 3.61
141 142 2.106683 CCTTACGCCTTCGCCTTGG 61.107 63.158 0.00 0.00 39.84 3.61
142 143 2.744709 TTACGCCTTCGCCTTGGC 60.745 61.111 0.75 0.75 45.25 4.52
143 144 3.248446 TTACGCCTTCGCCTTGGCT 62.248 57.895 10.12 0.00 46.42 4.75
144 145 3.950794 TACGCCTTCGCCTTGGCTG 62.951 63.158 10.12 3.87 46.42 4.85
147 148 2.674380 CCTTCGCCTTGGCTGCTT 60.674 61.111 10.12 0.00 0.00 3.91
148 149 2.694760 CCTTCGCCTTGGCTGCTTC 61.695 63.158 10.12 0.00 0.00 3.86
149 150 2.672996 TTCGCCTTGGCTGCTTCC 60.673 61.111 10.12 0.00 0.00 3.46
150 151 4.722700 TCGCCTTGGCTGCTTCCC 62.723 66.667 10.12 0.00 0.00 3.97
153 154 4.729918 CCTTGGCTGCTTCCCGCT 62.730 66.667 0.00 0.00 40.11 5.52
154 155 2.674380 CTTGGCTGCTTCCCGCTT 60.674 61.111 0.00 0.00 40.11 4.68
155 156 2.672996 TTGGCTGCTTCCCGCTTC 60.673 61.111 0.00 0.00 40.11 3.86
156 157 4.722700 TGGCTGCTTCCCGCTTCC 62.723 66.667 0.00 0.00 40.11 3.46
158 159 4.416738 GCTGCTTCCCGCTTCCCT 62.417 66.667 0.00 0.00 40.11 4.20
159 160 2.124942 CTGCTTCCCGCTTCCCTC 60.125 66.667 0.00 0.00 40.11 4.30
160 161 4.082523 TGCTTCCCGCTTCCCTCG 62.083 66.667 0.00 0.00 40.11 4.63
162 163 4.840005 CTTCCCGCTTCCCTCGCC 62.840 72.222 0.00 0.00 0.00 5.54
184 185 4.183686 CCGCGCCTTTGCCATCTG 62.184 66.667 0.00 0.00 0.00 2.90
185 186 4.842091 CGCGCCTTTGCCATCTGC 62.842 66.667 0.00 0.00 41.77 4.26
197 198 3.526931 GCCATCTGCAGAGTACTTACA 57.473 47.619 22.96 0.00 40.77 2.41
244 245 1.587066 AGTAACGGGCCTTAATCCCA 58.413 50.000 0.84 0.00 44.11 4.37
246 247 2.092592 AGTAACGGGCCTTAATCCCAAG 60.093 50.000 0.84 1.60 44.11 3.61
248 249 0.255033 ACGGGCCTTAATCCCAAGAC 59.745 55.000 0.84 0.00 44.11 3.01
255 256 5.069119 GGGCCTTAATCCCAAGACATAAAAG 59.931 44.000 0.84 0.00 43.37 2.27
256 257 5.451937 GGCCTTAATCCCAAGACATAAAAGC 60.452 44.000 0.00 0.00 0.00 3.51
257 258 5.733373 GCCTTAATCCCAAGACATAAAAGCG 60.733 44.000 0.00 0.00 0.00 4.68
258 259 5.357032 CCTTAATCCCAAGACATAAAAGCGT 59.643 40.000 0.00 0.00 0.00 5.07
259 260 6.540914 CCTTAATCCCAAGACATAAAAGCGTA 59.459 38.462 0.00 0.00 0.00 4.42
268 269 5.057149 AGACATAAAAGCGTATAGGGCAAG 58.943 41.667 0.00 0.00 0.00 4.01
271 272 2.038387 AAAGCGTATAGGGCAAGTGG 57.962 50.000 0.00 0.00 0.00 4.00
273 274 1.227853 GCGTATAGGGCAAGTGGGG 60.228 63.158 0.00 0.00 0.00 4.96
301 302 6.599445 AGATACCTGGAATCAGAATTGGAAG 58.401 40.000 0.00 0.00 43.49 3.46
302 303 4.664688 ACCTGGAATCAGAATTGGAAGT 57.335 40.909 0.00 0.00 43.49 3.01
306 307 7.283329 ACCTGGAATCAGAATTGGAAGTATAC 58.717 38.462 0.00 0.00 43.49 1.47
308 309 7.941238 CCTGGAATCAGAATTGGAAGTATACAT 59.059 37.037 5.50 0.00 43.49 2.29
309 310 8.908786 TGGAATCAGAATTGGAAGTATACATC 57.091 34.615 5.50 2.24 0.00 3.06
310 311 8.493607 TGGAATCAGAATTGGAAGTATACATCA 58.506 33.333 10.09 0.32 0.00 3.07
311 312 9.512588 GGAATCAGAATTGGAAGTATACATCAT 57.487 33.333 10.09 0.00 0.00 2.45
315 316 8.485392 TCAGAATTGGAAGTATACATCATGACA 58.515 33.333 10.09 0.00 0.00 3.58
316 317 9.281371 CAGAATTGGAAGTATACATCATGACAT 57.719 33.333 10.09 0.00 0.00 3.06
317 318 9.499479 AGAATTGGAAGTATACATCATGACATC 57.501 33.333 10.09 1.50 0.00 3.06
318 319 9.276590 GAATTGGAAGTATACATCATGACATCA 57.723 33.333 10.09 0.00 0.00 3.07
319 320 9.803507 AATTGGAAGTATACATCATGACATCAT 57.196 29.630 10.09 0.00 36.96 2.45
344 445 2.283145 AAGAGGCTTCATGCTTGTGT 57.717 45.000 0.00 0.00 42.39 3.72
345 446 1.531423 AGAGGCTTCATGCTTGTGTG 58.469 50.000 0.00 0.00 42.39 3.82
368 469 2.034687 ATGGGAGCTTTGCGTGCT 59.965 55.556 0.00 0.00 44.24 4.40
371 472 2.555547 GGGAGCTTTGCGTGCTTGT 61.556 57.895 0.00 0.00 41.30 3.16
387 488 3.905784 GCTTGTTGCAGAGCTGTTTAAT 58.094 40.909 10.47 0.00 42.31 1.40
388 489 4.301628 GCTTGTTGCAGAGCTGTTTAATT 58.698 39.130 10.47 0.00 42.31 1.40
390 491 5.920273 GCTTGTTGCAGAGCTGTTTAATTAA 59.080 36.000 10.47 0.00 42.31 1.40
391 492 6.088616 GCTTGTTGCAGAGCTGTTTAATTAAG 59.911 38.462 10.47 0.00 42.31 1.85
392 493 6.875948 TGTTGCAGAGCTGTTTAATTAAGA 57.124 33.333 0.00 0.00 0.00 2.10
393 494 7.270757 TGTTGCAGAGCTGTTTAATTAAGAA 57.729 32.000 0.00 0.00 0.00 2.52
394 495 7.711846 TGTTGCAGAGCTGTTTAATTAAGAAA 58.288 30.769 0.00 0.00 0.00 2.52
395 496 8.194104 TGTTGCAGAGCTGTTTAATTAAGAAAA 58.806 29.630 0.00 0.00 0.00 2.29
396 497 8.694394 GTTGCAGAGCTGTTTAATTAAGAAAAG 58.306 33.333 0.00 0.00 0.00 2.27
416 517 8.531146 AGAAAAGAAAAAGAACATTTGGTCAGA 58.469 29.630 0.00 0.00 33.22 3.27
417 518 8.707938 AAAAGAAAAAGAACATTTGGTCAGAG 57.292 30.769 0.00 0.00 33.22 3.35
418 519 5.836347 AGAAAAAGAACATTTGGTCAGAGC 58.164 37.500 0.00 0.00 33.22 4.09
419 520 5.360714 AGAAAAAGAACATTTGGTCAGAGCA 59.639 36.000 0.00 0.00 33.22 4.26
420 521 4.843220 AAAGAACATTTGGTCAGAGCAG 57.157 40.909 1.86 0.00 33.22 4.24
421 522 3.498774 AGAACATTTGGTCAGAGCAGT 57.501 42.857 1.86 0.00 33.22 4.40
423 524 4.573900 AGAACATTTGGTCAGAGCAGTAG 58.426 43.478 1.86 0.00 33.22 2.57
424 525 4.284490 AGAACATTTGGTCAGAGCAGTAGA 59.716 41.667 1.86 0.00 33.22 2.59
425 526 3.931578 ACATTTGGTCAGAGCAGTAGAC 58.068 45.455 1.86 0.00 0.00 2.59
426 527 3.324846 ACATTTGGTCAGAGCAGTAGACA 59.675 43.478 1.86 0.00 34.04 3.41
427 528 4.019860 ACATTTGGTCAGAGCAGTAGACAT 60.020 41.667 1.86 0.00 34.04 3.06
428 529 3.599730 TTGGTCAGAGCAGTAGACATG 57.400 47.619 1.86 0.00 34.04 3.21
437 538 2.765135 AGCAGTAGACATGCATGACTCT 59.235 45.455 32.75 25.51 46.31 3.24
448 549 4.146745 TGCATGACTCTAGTGCATCATT 57.853 40.909 0.00 0.00 43.30 2.57
453 554 5.411831 TGACTCTAGTGCATCATTTCAGT 57.588 39.130 0.00 0.00 0.00 3.41
458 559 8.261492 ACTCTAGTGCATCATTTCAGTAAAAG 57.739 34.615 0.00 0.00 0.00 2.27
459 560 7.076842 TCTAGTGCATCATTTCAGTAAAAGC 57.923 36.000 0.00 0.00 0.00 3.51
487 588 3.131933 CACCAAACCAAACTCAACCATGA 59.868 43.478 0.00 0.00 0.00 3.07
512 613 6.934645 AGAAATAAAGACGACTCAATTGTCCA 59.065 34.615 5.13 0.00 42.19 4.02
537 638 5.697633 GGCATCATTGTTGAACTTGTGATTT 59.302 36.000 0.00 0.00 34.96 2.17
538 639 6.347079 GGCATCATTGTTGAACTTGTGATTTG 60.347 38.462 0.00 0.00 34.96 2.32
541 642 7.099266 TCATTGTTGAACTTGTGATTTGACT 57.901 32.000 0.00 0.00 0.00 3.41
542 643 8.219546 TCATTGTTGAACTTGTGATTTGACTA 57.780 30.769 0.00 0.00 0.00 2.59
553 658 5.891451 TGTGATTTGACTACTCCTACGATG 58.109 41.667 0.00 0.00 0.00 3.84
583 688 2.159517 GGCCATTCGTTGTAGCTGAAAG 60.160 50.000 0.00 0.00 0.00 2.62
587 692 5.385617 CCATTCGTTGTAGCTGAAAGAAAG 58.614 41.667 10.96 7.89 34.07 2.62
588 693 4.468095 TTCGTTGTAGCTGAAAGAAAGC 57.532 40.909 0.00 0.00 41.15 3.51
589 694 3.462982 TCGTTGTAGCTGAAAGAAAGCA 58.537 40.909 0.00 0.00 43.37 3.91
590 695 3.247648 TCGTTGTAGCTGAAAGAAAGCAC 59.752 43.478 0.00 0.00 43.37 4.40
591 696 3.002246 CGTTGTAGCTGAAAGAAAGCACA 59.998 43.478 0.00 0.00 43.37 4.57
593 698 4.552166 TGTAGCTGAAAGAAAGCACAAC 57.448 40.909 0.00 0.00 43.37 3.32
594 699 2.763249 AGCTGAAAGAAAGCACAACG 57.237 45.000 0.00 0.00 43.37 4.10
595 700 2.017049 AGCTGAAAGAAAGCACAACGT 58.983 42.857 0.00 0.00 43.37 3.99
596 701 3.202906 AGCTGAAAGAAAGCACAACGTA 58.797 40.909 0.00 0.00 43.37 3.57
597 702 3.815401 AGCTGAAAGAAAGCACAACGTAT 59.185 39.130 0.00 0.00 43.37 3.06
598 703 4.994852 AGCTGAAAGAAAGCACAACGTATA 59.005 37.500 0.00 0.00 43.37 1.47
599 704 5.080068 GCTGAAAGAAAGCACAACGTATAC 58.920 41.667 0.00 0.00 40.52 1.47
601 706 6.462073 TGAAAGAAAGCACAACGTATACTC 57.538 37.500 0.56 0.00 0.00 2.59
602 707 6.220930 TGAAAGAAAGCACAACGTATACTCT 58.779 36.000 0.56 0.00 0.00 3.24
603 708 6.704493 TGAAAGAAAGCACAACGTATACTCTT 59.296 34.615 0.56 0.00 0.00 2.85
604 709 7.868922 TGAAAGAAAGCACAACGTATACTCTTA 59.131 33.333 0.56 0.00 0.00 2.10
605 710 8.773404 AAAGAAAGCACAACGTATACTCTTAT 57.227 30.769 0.56 0.00 0.00 1.73
606 711 7.988904 AGAAAGCACAACGTATACTCTTATC 57.011 36.000 0.56 0.00 0.00 1.75
607 712 6.691818 AGAAAGCACAACGTATACTCTTATCG 59.308 38.462 0.56 0.00 0.00 2.92
608 713 5.746307 AGCACAACGTATACTCTTATCGA 57.254 39.130 0.56 0.00 0.00 3.59
610 715 6.736123 AGCACAACGTATACTCTTATCGAAT 58.264 36.000 0.56 0.00 0.00 3.34
611 716 7.868775 AGCACAACGTATACTCTTATCGAATA 58.131 34.615 0.56 0.00 0.00 1.75
612 717 8.347771 AGCACAACGTATACTCTTATCGAATAA 58.652 33.333 0.56 0.00 0.00 1.40
780 908 6.470877 GCTGAAAAGTATCGAGTAGAACTCTG 59.529 42.308 5.59 0.29 42.92 3.35
824 952 1.226802 CGATCCTGTCCAGCTCACG 60.227 63.158 0.00 0.00 0.00 4.35
868 996 4.759516 TGAAGATAAAAACTGGAACGGC 57.240 40.909 0.00 0.00 39.14 5.68
895 1186 1.609072 CTGACAGAGTTGACGGACTCA 59.391 52.381 15.24 0.00 46.69 3.41
939 1235 2.593346 AGCTTGAGATAAGGCGTGAG 57.407 50.000 0.00 0.00 0.00 3.51
942 1238 1.482593 CTTGAGATAAGGCGTGAGGGT 59.517 52.381 0.00 0.00 0.00 4.34
945 1241 2.093658 TGAGATAAGGCGTGAGGGTTTC 60.094 50.000 0.00 0.00 0.00 2.78
966 1263 0.748005 GACCAGGTGCAAGTGTGTGT 60.748 55.000 0.00 0.00 0.00 3.72
975 1272 2.131972 GCAAGTGTGTGTACGTGATGA 58.868 47.619 0.00 0.00 32.79 2.92
977 1274 3.120041 CAAGTGTGTGTACGTGATGACA 58.880 45.455 0.00 0.00 32.79 3.58
979 1276 1.790623 GTGTGTGTACGTGATGACACC 59.209 52.381 14.91 8.28 44.37 4.16
993 1290 0.667792 GACACCGTGGAAGTGCTCTC 60.668 60.000 3.03 0.00 38.87 3.20
994 1292 1.115930 ACACCGTGGAAGTGCTCTCT 61.116 55.000 3.03 0.00 38.87 3.10
1000 1298 1.623811 GTGGAAGTGCTCTCTAACCCA 59.376 52.381 0.00 0.00 0.00 4.51
1033 1336 2.515290 CTGCGCATCCAGCATCCA 60.515 61.111 12.24 0.00 46.13 3.41
1035 1338 1.452953 CTGCGCATCCAGCATCCAAT 61.453 55.000 12.24 0.00 46.13 3.16
1037 1340 1.170919 GCGCATCCAGCATCCAATCT 61.171 55.000 0.30 0.00 46.13 2.40
1056 1363 1.002888 CTCACACTTCCCAGCTCACAT 59.997 52.381 0.00 0.00 0.00 3.21
1066 1373 1.611410 CCAGCTCACATACCACAGCAA 60.611 52.381 0.00 0.00 34.08 3.91
1071 1378 2.228822 CTCACATACCACAGCAAAACCC 59.771 50.000 0.00 0.00 0.00 4.11
1072 1379 1.068610 CACATACCACAGCAAAACCCG 60.069 52.381 0.00 0.00 0.00 5.28
1075 1382 4.341502 CCACAGCAAAACCCGGCG 62.342 66.667 0.00 0.00 34.54 6.46
1077 1384 2.517402 ACAGCAAAACCCGGCGAA 60.517 55.556 9.30 0.00 34.54 4.70
1079 1386 1.660264 CAGCAAAACCCGGCGAAAC 60.660 57.895 9.30 0.00 34.54 2.78
1082 1389 1.663173 CAAAACCCGGCGAAACCAT 59.337 52.632 9.30 0.00 39.03 3.55
1083 1390 0.665972 CAAAACCCGGCGAAACCATG 60.666 55.000 9.30 0.00 39.03 3.66
1084 1391 2.428960 AAAACCCGGCGAAACCATGC 62.429 55.000 9.30 0.00 39.03 4.06
1085 1392 4.652131 ACCCGGCGAAACCATGCA 62.652 61.111 9.30 0.00 39.03 3.96
1086 1393 4.114997 CCCGGCGAAACCATGCAC 62.115 66.667 9.30 0.00 39.03 4.57
1087 1394 4.114997 CCGGCGAAACCATGCACC 62.115 66.667 9.30 0.00 39.03 5.01
1097 1404 1.187567 ACCATGCACCAAGAAAGGCC 61.188 55.000 0.00 0.00 0.00 5.19
1101 1408 3.373565 CACCAAGAAAGGCCGCCC 61.374 66.667 5.55 0.00 0.00 6.13
1117 1424 2.721167 CCCTTCTGTGCGATCCGGA 61.721 63.158 6.61 6.61 0.00 5.14
1131 1438 1.004918 CCGGACGAGCAAAGGTTCT 60.005 57.895 0.00 0.00 0.00 3.01
1132 1439 1.014564 CCGGACGAGCAAAGGTTCTC 61.015 60.000 0.00 0.00 0.00 2.87
1149 1456 0.187361 CTCCCTACTCCCTCCTCCTG 59.813 65.000 0.00 0.00 0.00 3.86
1154 1560 3.501385 CCCTACTCCCTCCTCCTGATTAG 60.501 56.522 0.00 0.00 0.00 1.73
1156 1562 4.354387 CCTACTCCCTCCTCCTGATTAGTA 59.646 50.000 0.00 0.00 0.00 1.82
1161 1567 4.730392 TCCCTCCTCCTGATTAGTACTGTA 59.270 45.833 5.39 0.00 0.00 2.74
1162 1568 4.828387 CCCTCCTCCTGATTAGTACTGTAC 59.172 50.000 9.93 9.93 0.00 2.90
1163 1569 5.399267 CCCTCCTCCTGATTAGTACTGTACT 60.399 48.000 22.72 22.72 42.68 2.73
1166 1572 7.778853 CCTCCTCCTGATTAGTACTGTACTTTA 59.221 40.741 24.09 13.81 40.14 1.85
1167 1573 8.517062 TCCTCCTGATTAGTACTGTACTTTAC 57.483 38.462 24.09 15.41 40.14 2.01
1168 1574 8.334734 TCCTCCTGATTAGTACTGTACTTTACT 58.665 37.037 24.09 5.63 40.14 2.24
1169 1575 8.407064 CCTCCTGATTAGTACTGTACTTTACTG 58.593 40.741 24.09 16.95 40.14 2.74
1172 1578 8.251721 CCTGATTAGTACTGTACTTTACTGCTT 58.748 37.037 24.09 1.22 40.14 3.91
1173 1579 9.291664 CTGATTAGTACTGTACTTTACTGCTTC 57.708 37.037 24.09 10.81 40.14 3.86
1174 1580 9.021807 TGATTAGTACTGTACTTTACTGCTTCT 57.978 33.333 24.09 0.03 40.14 2.85
1175 1581 9.291664 GATTAGTACTGTACTTTACTGCTTCTG 57.708 37.037 24.09 0.00 40.14 3.02
1176 1582 5.471257 AGTACTGTACTTTACTGCTTCTGC 58.529 41.667 14.53 0.00 34.86 4.26
1177 1583 4.608948 ACTGTACTTTACTGCTTCTGCT 57.391 40.909 0.00 0.00 40.48 4.24
1179 1585 6.097915 ACTGTACTTTACTGCTTCTGCTTA 57.902 37.500 0.00 0.00 40.48 3.09
1180 1586 6.522054 ACTGTACTTTACTGCTTCTGCTTAA 58.478 36.000 0.00 0.00 40.48 1.85
1181 1587 6.424207 ACTGTACTTTACTGCTTCTGCTTAAC 59.576 38.462 0.00 0.00 40.48 2.01
1182 1588 6.285224 TGTACTTTACTGCTTCTGCTTAACA 58.715 36.000 0.00 0.00 40.48 2.41
1183 1589 6.934645 TGTACTTTACTGCTTCTGCTTAACAT 59.065 34.615 0.00 0.00 40.48 2.71
1184 1590 6.487689 ACTTTACTGCTTCTGCTTAACATC 57.512 37.500 0.00 0.00 40.48 3.06
1185 1591 5.412904 ACTTTACTGCTTCTGCTTAACATCC 59.587 40.000 0.00 0.00 40.48 3.51
1187 1593 2.289694 ACTGCTTCTGCTTAACATCCGT 60.290 45.455 0.00 0.00 40.48 4.69
1189 1595 2.076863 GCTTCTGCTTAACATCCGTGT 58.923 47.619 0.00 0.00 36.78 4.49
1190 1596 2.484264 GCTTCTGCTTAACATCCGTGTT 59.516 45.455 0.00 0.00 42.63 3.32
1191 1597 3.682858 GCTTCTGCTTAACATCCGTGTTA 59.317 43.478 0.00 0.00 46.27 2.41
1199 1605 3.402628 AACATCCGTGTTAGCTTCTGT 57.597 42.857 0.00 0.00 46.37 3.41
1200 1606 2.960819 ACATCCGTGTTAGCTTCTGTC 58.039 47.619 0.00 0.00 34.01 3.51
1202 1608 3.006967 ACATCCGTGTTAGCTTCTGTCTT 59.993 43.478 0.00 0.00 34.01 3.01
1203 1609 3.026630 TCCGTGTTAGCTTCTGTCTTG 57.973 47.619 0.00 0.00 0.00 3.02
1204 1610 1.461127 CCGTGTTAGCTTCTGTCTTGC 59.539 52.381 0.00 0.00 0.00 4.01
1205 1611 2.408050 CGTGTTAGCTTCTGTCTTGCT 58.592 47.619 0.00 0.00 40.43 3.91
1206 1612 2.156504 CGTGTTAGCTTCTGTCTTGCTG 59.843 50.000 0.00 0.00 37.62 4.41
1207 1613 2.096019 GTGTTAGCTTCTGTCTTGCTGC 60.096 50.000 0.00 0.00 37.62 5.25
1208 1614 1.466558 GTTAGCTTCTGTCTTGCTGCC 59.533 52.381 0.00 0.00 37.62 4.85
1209 1615 0.390340 TAGCTTCTGTCTTGCTGCCG 60.390 55.000 0.00 0.00 37.62 5.69
1210 1616 1.669115 GCTTCTGTCTTGCTGCCGA 60.669 57.895 0.00 0.00 0.00 5.54
1212 1618 1.633852 CTTCTGTCTTGCTGCCGAGC 61.634 60.000 0.00 0.00 46.44 5.03
1220 1626 3.435186 GCTGCCGAGCAAGGTTCC 61.435 66.667 0.35 0.00 45.46 3.62
1221 1627 2.747855 CTGCCGAGCAAGGTTCCC 60.748 66.667 0.35 0.00 38.41 3.97
1222 1628 3.249189 TGCCGAGCAAGGTTCCCT 61.249 61.111 0.00 0.00 34.76 4.20
1223 1629 1.899437 CTGCCGAGCAAGGTTCCCTA 61.899 60.000 0.35 0.00 38.41 3.53
1224 1630 1.449778 GCCGAGCAAGGTTCCCTAC 60.450 63.158 0.00 0.00 31.13 3.18
1225 1631 1.900545 GCCGAGCAAGGTTCCCTACT 61.901 60.000 0.00 0.00 31.13 2.57
1226 1632 0.175989 CCGAGCAAGGTTCCCTACTC 59.824 60.000 0.00 4.07 35.13 2.59
1227 1633 0.895530 CGAGCAAGGTTCCCTACTCA 59.104 55.000 11.58 0.00 37.02 3.41
1228 1634 1.404315 CGAGCAAGGTTCCCTACTCAC 60.404 57.143 11.58 0.00 37.02 3.51
1229 1635 1.623811 GAGCAAGGTTCCCTACTCACA 59.376 52.381 7.87 0.00 37.10 3.58
1230 1636 1.625818 AGCAAGGTTCCCTACTCACAG 59.374 52.381 0.00 0.00 31.13 3.66
1231 1637 1.623811 GCAAGGTTCCCTACTCACAGA 59.376 52.381 0.00 0.00 31.13 3.41
1232 1638 2.038557 GCAAGGTTCCCTACTCACAGAA 59.961 50.000 0.00 0.00 31.13 3.02
1237 1643 6.301169 AGGTTCCCTACTCACAGAATTTAG 57.699 41.667 0.00 0.00 28.47 1.85
1240 1646 4.362677 TCCCTACTCACAGAATTTAGCCT 58.637 43.478 0.00 0.00 0.00 4.58
1251 1657 4.331168 CAGAATTTAGCCTCTGTGCACTAC 59.669 45.833 19.41 2.80 35.38 2.73
1252 1658 4.223923 AGAATTTAGCCTCTGTGCACTACT 59.776 41.667 19.41 10.20 0.00 2.57
1253 1659 5.422331 AGAATTTAGCCTCTGTGCACTACTA 59.578 40.000 19.41 9.24 0.00 1.82
1254 1660 5.878406 ATTTAGCCTCTGTGCACTACTAT 57.122 39.130 19.41 2.45 0.00 2.12
1255 1661 5.677319 TTTAGCCTCTGTGCACTACTATT 57.323 39.130 19.41 2.68 0.00 1.73
1263 1669 6.208988 TCTGTGCACTACTATTAACTGGAG 57.791 41.667 19.41 1.42 0.00 3.86
1270 1676 7.988904 CACTACTATTAACTGGAGTGCTTAC 57.011 40.000 8.43 0.00 0.00 2.34
1273 1679 6.368779 ACTATTAACTGGAGTGCTTACCAA 57.631 37.500 0.00 0.00 35.67 3.67
1276 1682 3.290948 AACTGGAGTGCTTACCAACAA 57.709 42.857 0.00 0.00 35.67 2.83
1277 1683 3.290948 ACTGGAGTGCTTACCAACAAA 57.709 42.857 0.00 0.00 35.67 2.83
1278 1684 2.949644 ACTGGAGTGCTTACCAACAAAC 59.050 45.455 0.00 0.00 35.67 2.93
1279 1685 2.948979 CTGGAGTGCTTACCAACAAACA 59.051 45.455 0.00 0.00 35.67 2.83
1281 1687 4.720046 TGGAGTGCTTACCAACAAACATA 58.280 39.130 0.00 0.00 32.93 2.29
1286 1749 7.088589 AGTGCTTACCAACAAACATATGATC 57.911 36.000 10.38 0.00 0.00 2.92
1292 1755 9.485591 CTTACCAACAAACATATGATCGTTAAC 57.514 33.333 10.38 0.00 0.00 2.01
1298 1761 6.037172 ACAAACATATGATCGTTAACCAGAGC 59.963 38.462 10.38 0.00 0.00 4.09
1300 1763 5.670485 ACATATGATCGTTAACCAGAGCAA 58.330 37.500 10.38 0.00 36.33 3.91
1307 1770 1.798813 GTTAACCAGAGCAAGGTCACG 59.201 52.381 1.84 0.00 38.76 4.35
1309 1772 2.044806 AACCAGAGCAAGGTCACGCT 62.045 55.000 1.84 0.00 38.76 5.07
1341 1804 4.340097 TCATAGGTGAACATACTACCCACG 59.660 45.833 0.00 0.00 35.03 4.94
1373 1836 2.177394 TCATGCTTTGCAGGTAACGA 57.823 45.000 4.20 0.00 43.65 3.85
1533 2002 0.327924 TCAAGCGGGACATCACCAAT 59.672 50.000 0.00 0.00 0.00 3.16
1582 2051 3.221389 CCAGCATCCCCCATTGCG 61.221 66.667 0.00 0.00 43.61 4.85
1588 2057 2.000701 ATCCCCCATTGCGAGTGGA 61.001 57.895 3.62 0.00 39.12 4.02
1674 2143 0.036765 TGTCAGGTTCGATTTCCCCG 60.037 55.000 0.00 0.00 0.00 5.73
1738 2207 1.090052 AAATAGCTTCACCGGCGAGC 61.090 55.000 9.30 9.71 36.68 5.03
1844 2313 9.411189 ACTTACAAATTGTTCCAACCTAAGTTA 57.589 29.630 3.17 0.00 33.27 2.24
1856 2325 9.995594 TTCCAACCTAAGTTACTTAGACCTATA 57.004 33.333 27.86 10.44 44.24 1.31
1908 2377 3.133003 TCAGTATAGGCTTGCTCTCCAAC 59.867 47.826 0.00 0.00 0.00 3.77
1913 2382 0.538287 GGCTTGCTCTCCAACCTGTT 60.538 55.000 0.00 0.00 0.00 3.16
1916 2385 1.605710 CTTGCTCTCCAACCTGTTGTG 59.394 52.381 9.03 2.42 38.85 3.33
1917 2386 0.179020 TGCTCTCCAACCTGTTGTGG 60.179 55.000 9.03 0.00 38.85 4.17
1929 2398 2.948979 CCTGTTGTGGTTACAGCTTTCA 59.051 45.455 0.00 0.00 41.28 2.69
1988 2457 4.773323 AAAACATCAGCCAGTTAGAAGC 57.227 40.909 0.00 0.00 0.00 3.86
2028 2497 2.092429 TCAACTCATGGGTAGCATTCCC 60.092 50.000 0.00 4.26 44.81 3.97
2029 2498 0.846693 ACTCATGGGTAGCATTCCCC 59.153 55.000 0.00 1.40 44.00 4.81
2070 2539 4.881850 CCAAGTATGATGGGTTTGGTACTC 59.118 45.833 0.00 0.00 34.88 2.59
2162 2637 9.315363 AGACTTAAGTACCAATATGATAGGGAG 57.685 37.037 8.42 0.00 0.00 4.30
2172 2647 0.179048 TGATAGGGAGCACATTGCCG 60.179 55.000 0.00 0.00 46.52 5.69
2176 2651 2.401766 GGGAGCACATTGCCGTCTG 61.402 63.158 0.00 0.00 46.52 3.51
2192 2667 2.943033 CGTCTGATTTTGGTGATACCCC 59.057 50.000 0.00 0.00 37.50 4.95
2213 2688 2.237143 CCCCAAGTCTCACATTGCTCTA 59.763 50.000 0.00 0.00 0.00 2.43
2228 2703 7.712639 CACATTGCTCTACTTGGACTATAACAT 59.287 37.037 0.00 0.00 0.00 2.71
2239 2714 7.724061 ACTTGGACTATAACATGTTTGAAGGTT 59.276 33.333 17.78 0.00 0.00 3.50
2253 2728 5.975988 TTGAAGGTTATATCCCAGCTTCT 57.024 39.130 16.42 0.00 44.43 2.85
2256 2731 5.070981 TGAAGGTTATATCCCAGCTTCTCTG 59.929 44.000 16.42 0.00 44.43 3.35
2278 2753 4.593206 TGGGTAATACTTCAGGGCTATCAG 59.407 45.833 0.00 0.00 0.00 2.90
2295 2770 6.070538 GGCTATCAGTGTTGGACCTATCATAT 60.071 42.308 0.00 0.00 0.00 1.78
2350 2825 3.153919 GGTAGGCTTGGAATGTTGAACA 58.846 45.455 0.00 0.00 0.00 3.18
2467 2942 8.911918 TCTTGCACTAGGTAAAAATCAGTTAA 57.088 30.769 0.00 0.00 0.00 2.01
2568 3043 5.625568 GGACAATACCCACTAACATAGGT 57.374 43.478 0.00 0.00 36.36 3.08
2577 3052 7.063934 ACCCACTAACATAGGTAATCTTAGC 57.936 40.000 0.00 0.00 0.00 3.09
2587 3062 5.093849 AGGTAATCTTAGCGGCTTAACAA 57.906 39.130 8.26 0.00 36.33 2.83
2588 3063 4.874396 AGGTAATCTTAGCGGCTTAACAAC 59.126 41.667 8.26 0.17 36.33 3.32
2592 3067 3.064207 TCTTAGCGGCTTAACAACACTG 58.936 45.455 8.26 0.00 0.00 3.66
2594 3069 1.081442 GCGGCTTAACAACACTGGC 60.081 57.895 0.00 0.00 0.00 4.85
2595 3070 1.515521 GCGGCTTAACAACACTGGCT 61.516 55.000 0.00 0.00 0.00 4.75
2602 3077 4.523813 CTTAACAACACTGGCTTTACGTG 58.476 43.478 0.00 0.00 34.92 4.49
2603 3078 2.319136 ACAACACTGGCTTTACGTGA 57.681 45.000 0.00 0.00 33.13 4.35
2614 3089 3.297472 GCTTTACGTGAAAACAAGCTCC 58.703 45.455 0.00 0.00 37.47 4.70
2619 3094 1.305201 GTGAAAACAAGCTCCACGGA 58.695 50.000 0.00 0.00 0.00 4.69
2643 3118 3.701040 CCATTGAAGGATGGGTTCGAAAT 59.299 43.478 0.00 0.00 42.36 2.17
2648 3123 3.550437 AGGATGGGTTCGAAATCTGAG 57.450 47.619 0.00 0.00 0.00 3.35
2649 3124 2.171448 AGGATGGGTTCGAAATCTGAGG 59.829 50.000 0.00 0.00 0.00 3.86
2658 3133 5.232414 GGTTCGAAATCTGAGGAATCTAACG 59.768 44.000 0.00 0.00 0.00 3.18
2666 3141 5.416947 TCTGAGGAATCTAACGGTTTTAGC 58.583 41.667 0.00 0.00 0.00 3.09
2673 3148 6.183360 GGAATCTAACGGTTTTAGCTCTTGAC 60.183 42.308 0.00 0.00 0.00 3.18
2702 3177 1.818674 CTTCACTGGCCCAATACCAAC 59.181 52.381 0.00 0.00 36.56 3.77
2710 3185 2.441750 GGCCCAATACCAACCTCTATCA 59.558 50.000 0.00 0.00 0.00 2.15
2721 3196 5.189736 ACCAACCTCTATCAGTAATCTTGCA 59.810 40.000 0.00 0.00 0.00 4.08
2723 3198 6.259608 CCAACCTCTATCAGTAATCTTGCAAG 59.740 42.308 20.81 20.81 0.00 4.01
2725 3200 6.578023 ACCTCTATCAGTAATCTTGCAAGAC 58.422 40.000 30.66 18.78 37.98 3.01
2729 3204 7.840931 TCTATCAGTAATCTTGCAAGACTGAA 58.159 34.615 34.61 26.06 38.42 3.02
2734 3209 4.762956 AATCTTGCAAGACTGAAGAAGC 57.237 40.909 30.66 0.00 37.98 3.86
2754 3229 7.334090 AGAAGCTCTATCTAGCAAACAATGAA 58.666 34.615 0.00 0.00 45.30 2.57
2766 3241 5.055812 GCAAACAATGAATTTGAAGGTCCA 58.944 37.500 1.76 0.00 39.01 4.02
2787 6067 8.803235 GGTCCAATACCTTAAAATTTCTGAACT 58.197 33.333 0.00 0.00 45.75 3.01
2800 6080 9.574516 AAAATTTCTGAACTATCTACACCTGTT 57.425 29.630 0.00 0.00 0.00 3.16
2856 6136 3.057174 TGGGGTATTTGAAAATGTCACGC 60.057 43.478 0.00 0.00 35.39 5.34
2881 6161 2.174685 TCTCTCGATGGGAATTGGGA 57.825 50.000 0.00 0.00 0.00 4.37
2882 6162 2.042464 TCTCTCGATGGGAATTGGGAG 58.958 52.381 0.00 0.00 34.50 4.30
2938 6218 4.934001 CACTTGCTCTGCTATTTCTCAGAA 59.066 41.667 0.00 0.00 38.68 3.02
2970 6250 5.939296 AGACTGTACTACTTGGTCAGAGTAC 59.061 44.000 4.47 4.47 42.96 2.73
2979 6259 4.712337 ACTTGGTCAGAGTACTTATCCCTG 59.288 45.833 0.00 0.00 0.00 4.45
2985 6265 5.655532 GTCAGAGTACTTATCCCTGTGGTTA 59.344 44.000 0.00 0.00 0.00 2.85
2992 6272 4.475016 ACTTATCCCTGTGGTTAGCTTCAT 59.525 41.667 0.00 0.00 0.00 2.57
3019 6299 9.769093 ATCACTCGTATTGTTAATTTACTTTGC 57.231 29.630 0.00 0.00 0.00 3.68
3022 6302 7.742963 ACTCGTATTGTTAATTTACTTTGCACG 59.257 33.333 0.00 0.00 0.00 5.34
3028 6308 0.887933 ATTTACTTTGCACGCCTGGG 59.112 50.000 0.00 0.00 0.00 4.45
3048 6328 1.528129 GGCCAAGACACCAAGAAGAG 58.472 55.000 0.00 0.00 0.00 2.85
3052 6332 2.746362 CCAAGACACCAAGAAGAGCATC 59.254 50.000 0.00 0.00 0.00 3.91
3057 6337 4.472833 AGACACCAAGAAGAGCATCCTTAT 59.527 41.667 0.00 0.00 33.66 1.73
3067 6347 6.886459 AGAAGAGCATCCTTATTGTTGCTTTA 59.114 34.615 0.00 0.00 44.98 1.85
3070 6350 7.710896 AGAGCATCCTTATTGTTGCTTTATTC 58.289 34.615 0.00 0.00 44.98 1.75
3077 6357 7.043565 CCTTATTGTTGCTTTATTCTGGCAAT 58.956 34.615 0.00 0.00 45.55 3.56
3090 6370 6.705863 ATTCTGGCAATCATTTTCCTAGAC 57.294 37.500 0.00 0.00 0.00 2.59
3092 6372 6.560003 TCTGGCAATCATTTTCCTAGACTA 57.440 37.500 0.00 0.00 0.00 2.59
3093 6373 7.141758 TCTGGCAATCATTTTCCTAGACTAT 57.858 36.000 0.00 0.00 0.00 2.12
3149 6429 1.623811 TCTGAGTCTAACCTGGTTGGC 59.376 52.381 22.04 14.29 40.22 4.52
3310 6590 6.292381 CGACATCGAAATCTTGTTTCTATCCC 60.292 42.308 0.00 0.00 43.02 3.85
3506 6787 7.394016 CATTGGCCTACTTACACCATGATATA 58.606 38.462 3.32 0.00 30.85 0.86
3531 6812 3.144506 AGATCCATTGTCCATTGCGATC 58.855 45.455 0.00 0.00 0.00 3.69
3625 6918 5.119588 TCGTCCGTAATTCAAAGTCAACATC 59.880 40.000 0.00 0.00 0.00 3.06
3626 6919 5.107259 CGTCCGTAATTCAAAGTCAACATCA 60.107 40.000 0.00 0.00 0.00 3.07
3627 6920 6.307155 GTCCGTAATTCAAAGTCAACATCAG 58.693 40.000 0.00 0.00 0.00 2.90
3628 6921 5.995282 TCCGTAATTCAAAGTCAACATCAGT 59.005 36.000 0.00 0.00 0.00 3.41
3629 6922 6.485313 TCCGTAATTCAAAGTCAACATCAGTT 59.515 34.615 0.00 0.00 38.88 3.16
3706 6999 8.770010 ACTATAGGATATATTGCTCCAGGTAC 57.230 38.462 4.43 0.00 33.75 3.34
3732 7025 9.933723 CTCATCTCCACATCATATATTTGTGTA 57.066 33.333 17.94 7.38 39.23 2.90
3738 7031 9.764363 TCCACATCATATATTTGTGTAAGACTC 57.236 33.333 17.94 0.00 39.23 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.069318 GGCGAGGGAGAGAACGGT 61.069 66.667 0.00 0.00 0.00 4.83
1 2 3.839432 GGGCGAGGGAGAGAACGG 61.839 72.222 0.00 0.00 0.00 4.44
2 3 3.068691 TGGGCGAGGGAGAGAACG 61.069 66.667 0.00 0.00 0.00 3.95
3 4 2.579738 GTGGGCGAGGGAGAGAAC 59.420 66.667 0.00 0.00 0.00 3.01
4 5 2.683933 GGTGGGCGAGGGAGAGAA 60.684 66.667 0.00 0.00 0.00 2.87
5 6 3.673597 AGGTGGGCGAGGGAGAGA 61.674 66.667 0.00 0.00 0.00 3.10
6 7 3.465403 CAGGTGGGCGAGGGAGAG 61.465 72.222 0.00 0.00 0.00 3.20
9 10 3.787803 TATAAGCAGGTGGGCGAGGGA 62.788 57.143 0.00 0.00 39.27 4.20
10 11 1.407656 TATAAGCAGGTGGGCGAGGG 61.408 60.000 0.00 0.00 39.27 4.30
11 12 0.468226 TTATAAGCAGGTGGGCGAGG 59.532 55.000 0.00 0.00 39.27 4.63
12 13 1.583054 GTTATAAGCAGGTGGGCGAG 58.417 55.000 0.00 0.00 39.27 5.03
13 14 0.179468 GGTTATAAGCAGGTGGGCGA 59.821 55.000 9.77 0.00 39.27 5.54
14 15 0.818040 GGGTTATAAGCAGGTGGGCG 60.818 60.000 16.07 0.00 39.27 6.13
15 16 0.818040 CGGGTTATAAGCAGGTGGGC 60.818 60.000 16.07 0.00 0.00 5.36
16 17 0.818040 GCGGGTTATAAGCAGGTGGG 60.818 60.000 16.07 0.19 0.00 4.61
17 18 0.107410 TGCGGGTTATAAGCAGGTGG 60.107 55.000 16.07 1.75 35.81 4.61
18 19 3.469564 TGCGGGTTATAAGCAGGTG 57.530 52.632 16.07 4.45 35.81 4.00
22 23 0.906066 TGTCCTGCGGGTTATAAGCA 59.094 50.000 12.43 7.27 39.25 3.91
23 24 1.296727 GTGTCCTGCGGGTTATAAGC 58.703 55.000 12.43 6.10 0.00 3.09
24 25 2.684001 TGTGTCCTGCGGGTTATAAG 57.316 50.000 12.43 0.00 0.00 1.73
25 26 3.070446 CCTATGTGTCCTGCGGGTTATAA 59.930 47.826 12.43 0.00 0.00 0.98
26 27 2.631062 CCTATGTGTCCTGCGGGTTATA 59.369 50.000 12.43 5.69 0.00 0.98
27 28 1.416401 CCTATGTGTCCTGCGGGTTAT 59.584 52.381 12.43 4.81 0.00 1.89
28 29 0.828022 CCTATGTGTCCTGCGGGTTA 59.172 55.000 12.43 0.00 0.00 2.85
29 30 1.602237 CCTATGTGTCCTGCGGGTT 59.398 57.895 12.43 0.00 0.00 4.11
30 31 3.031417 GCCTATGTGTCCTGCGGGT 62.031 63.158 12.43 0.00 0.00 5.28
31 32 2.203070 GCCTATGTGTCCTGCGGG 60.203 66.667 4.71 4.71 0.00 6.13
32 33 1.399744 TAGGCCTATGTGTCCTGCGG 61.400 60.000 8.91 0.00 0.00 5.69
33 34 0.249489 GTAGGCCTATGTGTCCTGCG 60.249 60.000 17.38 0.00 0.00 5.18
34 35 1.123928 AGTAGGCCTATGTGTCCTGC 58.876 55.000 17.38 0.00 33.54 4.85
35 36 2.743183 GCAAGTAGGCCTATGTGTCCTG 60.743 54.545 17.38 3.67 0.00 3.86
36 37 1.486726 GCAAGTAGGCCTATGTGTCCT 59.513 52.381 17.38 3.92 0.00 3.85
37 38 1.486726 AGCAAGTAGGCCTATGTGTCC 59.513 52.381 17.38 1.20 0.00 4.02
38 39 2.990066 AGCAAGTAGGCCTATGTGTC 57.010 50.000 17.38 12.41 0.00 3.67
39 40 2.100916 CGTAGCAAGTAGGCCTATGTGT 59.899 50.000 17.38 10.00 0.00 3.72
40 41 2.545952 CCGTAGCAAGTAGGCCTATGTG 60.546 54.545 17.38 17.37 0.00 3.21
41 42 1.687123 CCGTAGCAAGTAGGCCTATGT 59.313 52.381 17.38 3.48 0.00 2.29
42 43 1.605712 GCCGTAGCAAGTAGGCCTATG 60.606 57.143 17.38 12.50 43.54 2.23
43 44 0.680061 GCCGTAGCAAGTAGGCCTAT 59.320 55.000 17.38 1.29 43.54 2.57
44 45 2.121645 GCCGTAGCAAGTAGGCCTA 58.878 57.895 8.91 8.91 43.54 3.93
45 46 2.901042 GCCGTAGCAAGTAGGCCT 59.099 61.111 11.78 11.78 43.54 5.19
48 49 1.066303 CAGAGAGCCGTAGCAAGTAGG 59.934 57.143 0.00 0.00 43.56 3.18
49 50 1.066303 CCAGAGAGCCGTAGCAAGTAG 59.934 57.143 0.00 0.00 43.56 2.57
50 51 1.103803 CCAGAGAGCCGTAGCAAGTA 58.896 55.000 0.00 0.00 43.56 2.24
51 52 1.893786 CCAGAGAGCCGTAGCAAGT 59.106 57.895 0.00 0.00 43.56 3.16
52 53 1.520342 GCCAGAGAGCCGTAGCAAG 60.520 63.158 0.00 0.00 43.56 4.01
53 54 2.579201 GCCAGAGAGCCGTAGCAA 59.421 61.111 0.00 0.00 43.56 3.91
54 55 3.461773 GGCCAGAGAGCCGTAGCA 61.462 66.667 0.00 0.00 44.57 3.49
61 62 2.904131 GGTAGTGGGCCAGAGAGC 59.096 66.667 6.40 0.23 0.00 4.09
62 63 3.082579 GCGGTAGTGGGCCAGAGAG 62.083 68.421 6.40 0.00 0.00 3.20
63 64 3.075005 GCGGTAGTGGGCCAGAGA 61.075 66.667 6.40 0.00 0.00 3.10
64 65 3.077556 AGCGGTAGTGGGCCAGAG 61.078 66.667 6.40 0.00 0.00 3.35
65 66 3.390521 CAGCGGTAGTGGGCCAGA 61.391 66.667 6.40 0.00 0.00 3.86
66 67 3.376935 CTCAGCGGTAGTGGGCCAG 62.377 68.421 6.40 0.00 0.00 4.85
67 68 3.390521 CTCAGCGGTAGTGGGCCA 61.391 66.667 0.00 0.00 0.00 5.36
68 69 3.075005 TCTCAGCGGTAGTGGGCC 61.075 66.667 0.00 0.00 0.00 5.80
69 70 2.184579 GTCTCAGCGGTAGTGGGC 59.815 66.667 0.00 0.00 0.00 5.36
70 71 1.330655 ATGGTCTCAGCGGTAGTGGG 61.331 60.000 0.00 0.00 0.00 4.61
71 72 0.103208 GATGGTCTCAGCGGTAGTGG 59.897 60.000 0.00 0.00 0.00 4.00
72 73 0.817654 TGATGGTCTCAGCGGTAGTG 59.182 55.000 0.00 0.00 30.73 2.74
73 74 1.107114 CTGATGGTCTCAGCGGTAGT 58.893 55.000 0.00 0.00 44.73 2.73
74 75 3.955291 CTGATGGTCTCAGCGGTAG 57.045 57.895 0.00 0.00 44.73 3.18
81 82 0.616395 TAACGGGCCTGATGGTCTCA 60.616 55.000 21.41 0.00 38.23 3.27
82 83 0.179081 GTAACGGGCCTGATGGTCTC 60.179 60.000 21.41 0.00 38.23 3.36
83 84 0.907704 TGTAACGGGCCTGATGGTCT 60.908 55.000 21.41 0.00 38.23 3.85
84 85 0.180406 ATGTAACGGGCCTGATGGTC 59.820 55.000 21.41 2.60 37.19 4.02
85 86 1.502690 TATGTAACGGGCCTGATGGT 58.497 50.000 21.41 2.65 35.27 3.55
86 87 2.859165 ATATGTAACGGGCCTGATGG 57.141 50.000 21.41 0.00 0.00 3.51
87 88 4.133820 TCAAATATGTAACGGGCCTGATG 58.866 43.478 21.41 0.25 0.00 3.07
88 89 4.431416 TCAAATATGTAACGGGCCTGAT 57.569 40.909 21.41 9.65 0.00 2.90
89 90 3.916359 TCAAATATGTAACGGGCCTGA 57.084 42.857 21.41 0.00 0.00 3.86
90 91 3.945285 AGTTCAAATATGTAACGGGCCTG 59.055 43.478 11.02 11.02 0.00 4.85
91 92 4.230745 AGTTCAAATATGTAACGGGCCT 57.769 40.909 0.84 0.00 0.00 5.19
92 93 4.201980 GGAAGTTCAAATATGTAACGGGCC 60.202 45.833 5.01 0.00 0.00 5.80
93 94 4.201980 GGGAAGTTCAAATATGTAACGGGC 60.202 45.833 5.01 0.00 0.00 6.13
94 95 4.034742 CGGGAAGTTCAAATATGTAACGGG 59.965 45.833 5.01 0.00 0.00 5.28
95 96 4.495184 GCGGGAAGTTCAAATATGTAACGG 60.495 45.833 5.01 0.00 0.00 4.44
96 97 4.331717 AGCGGGAAGTTCAAATATGTAACG 59.668 41.667 5.01 0.00 0.00 3.18
97 98 5.813080 AGCGGGAAGTTCAAATATGTAAC 57.187 39.130 5.01 0.00 0.00 2.50
98 99 6.314400 GTGTAGCGGGAAGTTCAAATATGTAA 59.686 38.462 5.01 0.00 0.00 2.41
99 100 5.813672 GTGTAGCGGGAAGTTCAAATATGTA 59.186 40.000 5.01 0.00 0.00 2.29
100 101 4.634443 GTGTAGCGGGAAGTTCAAATATGT 59.366 41.667 5.01 0.00 0.00 2.29
101 102 4.035208 GGTGTAGCGGGAAGTTCAAATATG 59.965 45.833 5.01 0.00 0.00 1.78
102 103 4.080526 AGGTGTAGCGGGAAGTTCAAATAT 60.081 41.667 5.01 0.00 0.00 1.28
103 104 3.262405 AGGTGTAGCGGGAAGTTCAAATA 59.738 43.478 5.01 0.00 0.00 1.40
104 105 2.039879 AGGTGTAGCGGGAAGTTCAAAT 59.960 45.455 5.01 0.00 0.00 2.32
105 106 1.418637 AGGTGTAGCGGGAAGTTCAAA 59.581 47.619 5.01 0.00 0.00 2.69
106 107 1.053424 AGGTGTAGCGGGAAGTTCAA 58.947 50.000 5.01 0.00 0.00 2.69
107 108 1.053424 AAGGTGTAGCGGGAAGTTCA 58.947 50.000 5.01 0.00 0.00 3.18
108 109 2.614779 GTAAGGTGTAGCGGGAAGTTC 58.385 52.381 0.00 0.00 0.00 3.01
109 110 1.067354 CGTAAGGTGTAGCGGGAAGTT 60.067 52.381 0.00 0.00 0.00 2.66
110 111 0.529378 CGTAAGGTGTAGCGGGAAGT 59.471 55.000 0.00 0.00 0.00 3.01
111 112 0.804933 GCGTAAGGTGTAGCGGGAAG 60.805 60.000 0.00 0.00 38.28 3.46
112 113 1.216178 GCGTAAGGTGTAGCGGGAA 59.784 57.895 0.00 0.00 38.28 3.97
113 114 2.713967 GGCGTAAGGTGTAGCGGGA 61.714 63.158 0.00 0.00 38.28 5.14
114 115 2.202837 GGCGTAAGGTGTAGCGGG 60.203 66.667 0.00 0.00 38.28 6.13
115 116 0.804933 GAAGGCGTAAGGTGTAGCGG 60.805 60.000 0.00 0.00 38.28 5.52
116 117 1.138047 CGAAGGCGTAAGGTGTAGCG 61.138 60.000 0.00 0.00 38.28 4.26
117 118 1.419107 GCGAAGGCGTAAGGTGTAGC 61.419 60.000 0.00 0.00 40.36 3.58
118 119 2.662150 GCGAAGGCGTAAGGTGTAG 58.338 57.895 0.00 0.00 40.36 2.74
119 120 4.895854 GCGAAGGCGTAAGGTGTA 57.104 55.556 0.00 0.00 40.36 2.90
145 146 4.840005 GGCGAGGGAAGCGGGAAG 62.840 72.222 0.00 0.00 35.00 3.46
167 168 4.183686 CAGATGGCAAAGGCGCGG 62.184 66.667 8.83 0.00 42.47 6.46
168 169 4.842091 GCAGATGGCAAAGGCGCG 62.842 66.667 0.00 0.00 43.97 6.86
177 178 3.190874 GTGTAAGTACTCTGCAGATGGC 58.809 50.000 18.63 9.97 45.13 4.40
178 179 4.456280 TGTGTAAGTACTCTGCAGATGG 57.544 45.455 18.63 9.30 0.00 3.51
179 180 6.800543 ACTATGTGTAAGTACTCTGCAGATG 58.199 40.000 18.63 13.72 0.00 2.90
180 181 8.698973 ATACTATGTGTAAGTACTCTGCAGAT 57.301 34.615 18.63 10.18 34.45 2.90
181 182 9.794719 ATATACTATGTGTAAGTACTCTGCAGA 57.205 33.333 17.19 17.19 34.45 4.26
183 184 9.794719 AGATATACTATGTGTAAGTACTCTGCA 57.205 33.333 0.00 0.00 34.45 4.41
193 194 9.489084 GGTGCATTTGAGATATACTATGTGTAA 57.511 33.333 0.00 0.00 34.45 2.41
194 195 8.646900 TGGTGCATTTGAGATATACTATGTGTA 58.353 33.333 0.00 0.00 35.37 2.90
195 196 7.508687 TGGTGCATTTGAGATATACTATGTGT 58.491 34.615 0.00 0.00 0.00 3.72
196 197 7.967890 TGGTGCATTTGAGATATACTATGTG 57.032 36.000 0.00 0.00 0.00 3.21
197 198 9.006839 CAATGGTGCATTTGAGATATACTATGT 57.993 33.333 0.00 0.00 31.05 2.29
244 245 5.031066 TGCCCTATACGCTTTTATGTCTT 57.969 39.130 0.00 0.00 0.00 3.01
246 247 4.814771 ACTTGCCCTATACGCTTTTATGTC 59.185 41.667 0.00 0.00 0.00 3.06
248 249 4.024048 CCACTTGCCCTATACGCTTTTATG 60.024 45.833 0.00 0.00 0.00 1.90
255 256 1.227853 CCCCACTTGCCCTATACGC 60.228 63.158 0.00 0.00 0.00 4.42
256 257 1.227853 GCCCCACTTGCCCTATACG 60.228 63.158 0.00 0.00 0.00 3.06
257 258 0.257616 TTGCCCCACTTGCCCTATAC 59.742 55.000 0.00 0.00 0.00 1.47
258 259 1.003646 TTTGCCCCACTTGCCCTATA 58.996 50.000 0.00 0.00 0.00 1.31
259 260 0.324645 CTTTGCCCCACTTGCCCTAT 60.325 55.000 0.00 0.00 0.00 2.57
268 269 0.623723 TCCAGGTATCTTTGCCCCAC 59.376 55.000 0.00 0.00 0.00 4.61
271 272 3.117888 TCTGATTCCAGGTATCTTTGCCC 60.118 47.826 7.53 0.00 40.76 5.36
273 274 6.460676 CCAATTCTGATTCCAGGTATCTTTGC 60.461 42.308 7.53 0.00 40.76 3.68
310 311 5.108187 AGCCTCTTAACACATGATGTCAT 57.892 39.130 0.00 0.00 42.31 3.06
311 312 4.558226 AGCCTCTTAACACATGATGTCA 57.442 40.909 0.00 0.00 42.31 3.58
312 313 4.937620 TGAAGCCTCTTAACACATGATGTC 59.062 41.667 0.00 0.00 42.31 3.06
313 314 4.910195 TGAAGCCTCTTAACACATGATGT 58.090 39.130 0.00 0.00 46.42 3.06
315 316 4.337555 GCATGAAGCCTCTTAACACATGAT 59.662 41.667 0.00 0.00 36.70 2.45
316 317 3.691118 GCATGAAGCCTCTTAACACATGA 59.309 43.478 0.00 0.00 36.70 3.07
317 318 4.025015 GCATGAAGCCTCTTAACACATG 57.975 45.455 0.00 0.00 37.23 3.21
344 445 0.968405 GCAAAGCTCCCATGTTTCCA 59.032 50.000 0.00 0.00 0.00 3.53
345 446 0.109132 CGCAAAGCTCCCATGTTTCC 60.109 55.000 0.00 0.00 0.00 3.13
368 469 7.270757 TCTTAATTAAACAGCTCTGCAACAA 57.729 32.000 0.00 0.00 0.00 2.83
371 472 8.629158 TCTTTTCTTAATTAAACAGCTCTGCAA 58.371 29.630 0.00 0.00 0.00 4.08
390 491 8.531146 TCTGACCAAATGTTCTTTTTCTTTTCT 58.469 29.630 0.00 0.00 0.00 2.52
391 492 8.702163 TCTGACCAAATGTTCTTTTTCTTTTC 57.298 30.769 0.00 0.00 0.00 2.29
392 493 7.278646 GCTCTGACCAAATGTTCTTTTTCTTTT 59.721 33.333 0.00 0.00 0.00 2.27
393 494 6.758416 GCTCTGACCAAATGTTCTTTTTCTTT 59.242 34.615 0.00 0.00 0.00 2.52
394 495 6.127366 TGCTCTGACCAAATGTTCTTTTTCTT 60.127 34.615 0.00 0.00 0.00 2.52
395 496 5.360714 TGCTCTGACCAAATGTTCTTTTTCT 59.639 36.000 0.00 0.00 0.00 2.52
396 497 5.591099 TGCTCTGACCAAATGTTCTTTTTC 58.409 37.500 0.00 0.00 0.00 2.29
400 501 3.825328 ACTGCTCTGACCAAATGTTCTT 58.175 40.909 0.00 0.00 0.00 2.52
402 503 4.390297 GTCTACTGCTCTGACCAAATGTTC 59.610 45.833 0.00 0.00 0.00 3.18
405 506 3.930336 TGTCTACTGCTCTGACCAAATG 58.070 45.455 0.00 0.00 0.00 2.32
416 517 2.765135 AGAGTCATGCATGTCTACTGCT 59.235 45.455 23.54 14.65 40.34 4.24
417 518 3.176552 AGAGTCATGCATGTCTACTGC 57.823 47.619 23.54 12.85 40.10 4.40
418 519 5.280164 CACTAGAGTCATGCATGTCTACTG 58.720 45.833 23.54 17.93 0.00 2.74
419 520 4.202101 GCACTAGAGTCATGCATGTCTACT 60.202 45.833 23.54 20.16 39.23 2.57
420 521 4.047822 GCACTAGAGTCATGCATGTCTAC 58.952 47.826 23.54 16.06 39.23 2.59
421 522 3.701040 TGCACTAGAGTCATGCATGTCTA 59.299 43.478 23.54 21.62 44.17 2.59
423 524 2.897436 TGCACTAGAGTCATGCATGTC 58.103 47.619 25.43 20.17 44.17 3.06
428 529 4.573607 TGAAATGATGCACTAGAGTCATGC 59.426 41.667 0.00 7.01 39.88 4.06
437 538 6.816134 TGCTTTTACTGAAATGATGCACTA 57.184 33.333 0.00 0.00 0.00 2.74
446 547 8.611757 GTTTGGTGAAAATGCTTTTACTGAAAT 58.388 29.630 0.00 0.00 32.89 2.17
448 549 6.536941 GGTTTGGTGAAAATGCTTTTACTGAA 59.463 34.615 0.00 0.00 32.89 3.02
453 554 6.881602 AGTTTGGTTTGGTGAAAATGCTTTTA 59.118 30.769 0.00 0.00 31.94 1.52
458 559 4.187694 TGAGTTTGGTTTGGTGAAAATGC 58.812 39.130 0.00 0.00 0.00 3.56
459 560 5.064579 GGTTGAGTTTGGTTTGGTGAAAATG 59.935 40.000 0.00 0.00 0.00 2.32
487 588 6.934645 TGGACAATTGAGTCGTCTTTATTTCT 59.065 34.615 13.59 0.00 39.42 2.52
493 594 3.403038 CCTGGACAATTGAGTCGTCTTT 58.597 45.455 13.59 0.00 39.42 2.52
495 596 1.338200 GCCTGGACAATTGAGTCGTCT 60.338 52.381 13.59 0.00 39.42 4.18
497 598 0.396435 TGCCTGGACAATTGAGTCGT 59.604 50.000 13.59 0.00 39.42 4.34
512 613 3.890756 TCACAAGTTCAACAATGATGCCT 59.109 39.130 0.73 0.00 34.96 4.75
537 638 5.095145 ACTGTACATCGTAGGAGTAGTCA 57.905 43.478 0.00 0.00 0.00 3.41
538 639 5.114780 TGACTGTACATCGTAGGAGTAGTC 58.885 45.833 0.00 0.00 0.00 2.59
541 642 4.449131 CCTGACTGTACATCGTAGGAGTA 58.551 47.826 0.00 0.00 0.00 2.59
542 643 3.280295 CCTGACTGTACATCGTAGGAGT 58.720 50.000 0.00 0.00 0.00 3.85
553 658 1.732259 CAACGAATGGCCTGACTGTAC 59.268 52.381 3.32 0.00 0.00 2.90
583 688 6.690098 TCGATAAGAGTATACGTTGTGCTTTC 59.310 38.462 0.00 0.00 0.00 2.62
587 692 6.988109 ATTCGATAAGAGTATACGTTGTGC 57.012 37.500 0.00 0.00 0.00 4.57
638 743 1.983119 TTTCTCCTATGGCCCTGCGG 61.983 60.000 0.00 0.00 0.00 5.69
639 744 0.107214 TTTTCTCCTATGGCCCTGCG 60.107 55.000 0.00 0.00 0.00 5.18
661 789 5.794894 ACATTCTCTTCTTTGATACCGTGT 58.205 37.500 0.00 0.00 0.00 4.49
665 793 8.041323 TGGTCTAACATTCTCTTCTTTGATACC 58.959 37.037 0.00 0.00 0.00 2.73
666 794 9.092876 CTGGTCTAACATTCTCTTCTTTGATAC 57.907 37.037 0.00 0.00 0.00 2.24
671 799 7.067496 TCACTGGTCTAACATTCTCTTCTTT 57.933 36.000 0.00 0.00 0.00 2.52
845 973 5.941058 TGCCGTTCCAGTTTTTATCTTCATA 59.059 36.000 0.00 0.00 0.00 2.15
846 974 4.764823 TGCCGTTCCAGTTTTTATCTTCAT 59.235 37.500 0.00 0.00 0.00 2.57
847 975 4.138290 TGCCGTTCCAGTTTTTATCTTCA 58.862 39.130 0.00 0.00 0.00 3.02
881 1172 2.067414 GACCTTGAGTCCGTCAACTC 57.933 55.000 3.59 3.59 44.87 3.01
895 1186 0.107945 GCAGATGGAGCGAAGACCTT 60.108 55.000 0.00 0.00 0.00 3.50
942 1238 1.064758 ACACTTGCACCTGGTCTGAAA 60.065 47.619 0.00 0.00 0.00 2.69
945 1241 0.464373 ACACACTTGCACCTGGTCTG 60.464 55.000 0.00 0.00 0.00 3.51
966 1263 0.960286 TTCCACGGTGTCATCACGTA 59.040 50.000 7.45 0.00 44.68 3.57
975 1272 1.115930 AGAGAGCACTTCCACGGTGT 61.116 55.000 7.45 0.00 37.07 4.16
977 1274 1.272769 GTTAGAGAGCACTTCCACGGT 59.727 52.381 0.00 0.00 0.00 4.83
979 1276 1.404315 GGGTTAGAGAGCACTTCCACG 60.404 57.143 0.00 0.00 0.00 4.94
993 1290 1.533711 CTGAGGCCCCATGGGTTAG 59.466 63.158 29.33 15.36 46.51 2.34
994 1292 2.689691 GCTGAGGCCCCATGGGTTA 61.690 63.158 29.33 7.10 46.51 2.85
1017 1315 1.449726 GATTGGATGCTGGATGCGCA 61.450 55.000 14.96 14.96 46.63 6.09
1019 1317 0.873054 GAGATTGGATGCTGGATGCG 59.127 55.000 0.00 0.00 46.63 4.73
1031 1334 1.004044 AGCTGGGAAGTGTGAGATTGG 59.996 52.381 0.00 0.00 0.00 3.16
1033 1336 1.980765 TGAGCTGGGAAGTGTGAGATT 59.019 47.619 0.00 0.00 0.00 2.40
1035 1338 0.681733 GTGAGCTGGGAAGTGTGAGA 59.318 55.000 0.00 0.00 0.00 3.27
1037 1340 1.059098 ATGTGAGCTGGGAAGTGTGA 58.941 50.000 0.00 0.00 0.00 3.58
1056 1363 1.899534 GCCGGGTTTTGCTGTGGTA 60.900 57.895 2.18 0.00 0.00 3.25
1066 1373 2.926420 GCATGGTTTCGCCGGGTTT 61.926 57.895 2.18 0.00 41.21 3.27
1071 1378 2.801113 CTTGGTGCATGGTTTCGCCG 62.801 60.000 0.00 0.00 41.21 6.46
1072 1379 1.080569 CTTGGTGCATGGTTTCGCC 60.081 57.895 0.00 0.00 37.90 5.54
1075 1382 2.867647 GCCTTTCTTGGTGCATGGTTTC 60.868 50.000 0.00 0.00 0.00 2.78
1077 1384 0.681175 GCCTTTCTTGGTGCATGGTT 59.319 50.000 0.00 0.00 0.00 3.67
1079 1386 1.593265 GGCCTTTCTTGGTGCATGG 59.407 57.895 0.00 0.00 0.00 3.66
1082 1389 3.294493 GCGGCCTTTCTTGGTGCA 61.294 61.111 0.00 0.00 33.14 4.57
1083 1390 4.056125 GGCGGCCTTTCTTGGTGC 62.056 66.667 12.87 0.00 0.00 5.01
1084 1391 3.373565 GGGCGGCCTTTCTTGGTG 61.374 66.667 22.87 0.00 0.00 4.17
1085 1392 3.146828 AAGGGCGGCCTTTCTTGGT 62.147 57.895 35.64 14.17 0.00 3.67
1086 1393 2.283173 AAGGGCGGCCTTTCTTGG 60.283 61.111 35.64 0.00 0.00 3.61
1087 1394 1.303643 AGAAGGGCGGCCTTTCTTG 60.304 57.895 39.89 0.00 45.66 3.02
1101 1408 1.874019 CGTCCGGATCGCACAGAAG 60.874 63.158 7.81 0.00 0.00 2.85
1131 1438 0.254154 TCAGGAGGAGGGAGTAGGGA 60.254 60.000 0.00 0.00 0.00 4.20
1132 1439 0.863956 ATCAGGAGGAGGGAGTAGGG 59.136 60.000 0.00 0.00 0.00 3.53
1135 1442 4.982956 AGTACTAATCAGGAGGAGGGAGTA 59.017 45.833 0.00 0.00 0.00 2.59
1149 1456 9.291664 CAGAAGCAGTAAAGTACAGTACTAATC 57.708 37.037 13.87 7.15 38.26 1.75
1154 1560 5.471257 AGCAGAAGCAGTAAAGTACAGTAC 58.529 41.667 2.05 2.05 45.49 2.73
1156 1562 4.608948 AGCAGAAGCAGTAAAGTACAGT 57.391 40.909 0.00 0.00 45.49 3.55
1161 1567 5.412904 GGATGTTAAGCAGAAGCAGTAAAGT 59.587 40.000 0.00 0.00 45.49 2.66
1162 1568 5.446473 CGGATGTTAAGCAGAAGCAGTAAAG 60.446 44.000 0.00 0.00 45.49 1.85
1163 1569 4.391830 CGGATGTTAAGCAGAAGCAGTAAA 59.608 41.667 0.00 0.00 45.49 2.01
1166 1572 2.289694 ACGGATGTTAAGCAGAAGCAGT 60.290 45.455 0.00 0.00 45.49 4.40
1167 1573 2.094894 CACGGATGTTAAGCAGAAGCAG 59.905 50.000 0.00 0.00 45.49 4.24
1168 1574 2.076100 CACGGATGTTAAGCAGAAGCA 58.924 47.619 0.00 0.00 45.49 3.91
1169 1575 2.076863 ACACGGATGTTAAGCAGAAGC 58.923 47.619 0.00 0.00 34.46 3.86
1180 1586 2.563179 AGACAGAAGCTAACACGGATGT 59.437 45.455 0.00 0.00 42.46 3.06
1181 1587 3.238108 AGACAGAAGCTAACACGGATG 57.762 47.619 0.00 0.00 0.00 3.51
1182 1588 3.589988 CAAGACAGAAGCTAACACGGAT 58.410 45.455 0.00 0.00 0.00 4.18
1183 1589 2.866460 GCAAGACAGAAGCTAACACGGA 60.866 50.000 0.00 0.00 0.00 4.69
1184 1590 1.461127 GCAAGACAGAAGCTAACACGG 59.539 52.381 0.00 0.00 0.00 4.94
1185 1591 2.156504 CAGCAAGACAGAAGCTAACACG 59.843 50.000 0.00 0.00 36.73 4.49
1187 1593 2.146342 GCAGCAAGACAGAAGCTAACA 58.854 47.619 0.00 0.00 36.73 2.41
1189 1595 1.813513 GGCAGCAAGACAGAAGCTAA 58.186 50.000 0.00 0.00 36.73 3.09
1190 1596 0.390340 CGGCAGCAAGACAGAAGCTA 60.390 55.000 0.00 0.00 36.73 3.32
1191 1597 1.670406 CGGCAGCAAGACAGAAGCT 60.670 57.895 0.00 0.00 39.63 3.74
1193 1599 1.633852 GCTCGGCAGCAAGACAGAAG 61.634 60.000 0.00 0.00 46.06 2.85
1194 1600 1.669115 GCTCGGCAGCAAGACAGAA 60.669 57.895 0.00 0.00 46.06 3.02
1195 1601 2.047844 GCTCGGCAGCAAGACAGA 60.048 61.111 0.00 0.00 46.06 3.41
1217 1623 4.783227 AGGCTAAATTCTGTGAGTAGGGAA 59.217 41.667 0.00 0.00 0.00 3.97
1218 1624 4.362677 AGGCTAAATTCTGTGAGTAGGGA 58.637 43.478 0.00 0.00 0.00 4.20
1219 1625 4.407296 AGAGGCTAAATTCTGTGAGTAGGG 59.593 45.833 0.00 0.00 0.00 3.53
1220 1626 5.355596 CAGAGGCTAAATTCTGTGAGTAGG 58.644 45.833 0.00 0.00 36.82 3.18
1228 1634 3.341823 AGTGCACAGAGGCTAAATTCTG 58.658 45.455 21.04 0.00 44.93 3.02
1229 1635 3.710209 AGTGCACAGAGGCTAAATTCT 57.290 42.857 21.04 0.00 34.04 2.40
1230 1636 4.508662 AGTAGTGCACAGAGGCTAAATTC 58.491 43.478 21.04 0.00 34.04 2.17
1231 1637 4.559862 AGTAGTGCACAGAGGCTAAATT 57.440 40.909 21.04 0.00 34.04 1.82
1232 1638 5.878406 ATAGTAGTGCACAGAGGCTAAAT 57.122 39.130 21.04 0.00 34.04 1.40
1237 1643 4.806247 CAGTTAATAGTAGTGCACAGAGGC 59.194 45.833 21.04 3.88 0.00 4.70
1240 1646 5.715279 ACTCCAGTTAATAGTAGTGCACAGA 59.285 40.000 21.04 3.05 0.00 3.41
1251 1657 6.170506 TGTTGGTAAGCACTCCAGTTAATAG 58.829 40.000 0.00 0.00 35.05 1.73
1252 1658 6.116711 TGTTGGTAAGCACTCCAGTTAATA 57.883 37.500 0.00 0.00 35.05 0.98
1253 1659 4.980573 TGTTGGTAAGCACTCCAGTTAAT 58.019 39.130 0.00 0.00 35.05 1.40
1254 1660 4.425180 TGTTGGTAAGCACTCCAGTTAA 57.575 40.909 0.00 0.00 35.05 2.01
1255 1661 4.425180 TTGTTGGTAAGCACTCCAGTTA 57.575 40.909 0.00 0.00 35.05 2.24
1263 1669 5.965334 CGATCATATGTTTGTTGGTAAGCAC 59.035 40.000 1.90 0.00 0.00 4.40
1266 1672 9.485591 GTTAACGATCATATGTTTGTTGGTAAG 57.514 33.333 22.02 0.00 0.00 2.34
1270 1676 6.847400 TGGTTAACGATCATATGTTTGTTGG 58.153 36.000 22.02 3.50 0.00 3.77
1273 1679 6.037172 GCTCTGGTTAACGATCATATGTTTGT 59.963 38.462 1.90 1.60 0.00 2.83
1276 1682 5.670485 TGCTCTGGTTAACGATCATATGTT 58.330 37.500 1.90 0.00 0.00 2.71
1277 1683 5.276461 TGCTCTGGTTAACGATCATATGT 57.724 39.130 1.90 0.00 0.00 2.29
1278 1684 5.178252 CCTTGCTCTGGTTAACGATCATATG 59.822 44.000 0.00 0.00 0.00 1.78
1279 1685 5.163301 ACCTTGCTCTGGTTAACGATCATAT 60.163 40.000 0.00 0.00 33.34 1.78
1281 1687 3.055094 ACCTTGCTCTGGTTAACGATCAT 60.055 43.478 0.00 0.00 33.34 2.45
1286 1749 1.798813 GTGACCTTGCTCTGGTTAACG 59.201 52.381 0.00 0.00 38.03 3.18
1292 1755 2.031516 CAGCGTGACCTTGCTCTGG 61.032 63.158 0.00 0.00 40.03 3.86
1298 1761 2.320587 GCTGGACAGCGTGACCTTG 61.321 63.158 8.72 3.50 45.29 3.61
1309 1772 2.637382 TGTTCACCTATGAAGCTGGACA 59.363 45.455 0.00 0.00 45.58 4.02
1318 1781 4.340097 CGTGGGTAGTATGTTCACCTATGA 59.660 45.833 0.00 0.00 33.03 2.15
1341 1804 3.863142 AAGCATGAAGAAATGAGCACC 57.137 42.857 0.00 0.00 0.00 5.01
1373 1836 3.846405 TTGGGAGACACGAGGCCCT 62.846 63.158 0.00 0.00 41.28 5.19
1408 1871 0.888285 GCCAGTAGCAGGATCATGGC 60.888 60.000 9.76 5.74 45.61 4.40
1533 2002 2.965805 CAAGGCTTGCCTTGGATCA 58.034 52.632 34.51 0.00 42.25 2.92
1582 2051 0.951040 CAGTTGACGCCCTTCCACTC 60.951 60.000 0.00 0.00 0.00 3.51
1588 2057 2.980233 GCTGCAGTTGACGCCCTT 60.980 61.111 16.64 0.00 0.00 3.95
1626 2095 2.230508 CTCGGTGAGGTTTAGCACAGTA 59.769 50.000 0.00 0.00 36.76 2.74
1674 2143 1.003718 CGTCAGGTTCCCAAGGGAC 60.004 63.158 7.50 3.38 45.11 4.46
1856 2325 1.343465 CACCTGTCAGGAAGTTACCGT 59.657 52.381 26.18 0.00 37.67 4.83
1908 2377 2.948979 TGAAAGCTGTAACCACAACAGG 59.051 45.455 5.47 0.00 43.71 4.00
1913 2382 7.575414 TTATTTTCTGAAAGCTGTAACCACA 57.425 32.000 2.75 0.00 0.00 4.17
1929 2398 6.649557 GGATCGTTCCGGTGATATTATTTTCT 59.350 38.462 0.00 0.00 30.72 2.52
2053 2522 1.913419 ACCGAGTACCAAACCCATCAT 59.087 47.619 0.00 0.00 0.00 2.45
2056 2525 0.326927 CCACCGAGTACCAAACCCAT 59.673 55.000 0.00 0.00 0.00 4.00
2058 2527 0.975887 TACCACCGAGTACCAAACCC 59.024 55.000 0.00 0.00 0.00 4.11
2070 2539 4.537135 ACCTGATAGCATATTACCACCG 57.463 45.455 0.00 0.00 0.00 4.94
2162 2637 1.987770 CAAAATCAGACGGCAATGTGC 59.012 47.619 0.00 0.00 44.08 4.57
2172 2647 3.288092 GGGGGTATCACCAAAATCAGAC 58.712 50.000 0.00 0.00 41.02 3.51
2192 2667 1.004044 AGAGCAATGTGAGACTTGGGG 59.996 52.381 0.00 0.00 0.00 4.96
2213 2688 7.231467 ACCTTCAAACATGTTATAGTCCAAGT 58.769 34.615 12.39 0.00 0.00 3.16
2228 2703 5.450818 AGCTGGGATATAACCTTCAAACA 57.549 39.130 0.00 0.00 0.00 2.83
2253 2728 3.130734 AGCCCTGAAGTATTACCCAGA 57.869 47.619 12.70 0.00 0.00 3.86
2256 2731 4.593634 ACTGATAGCCCTGAAGTATTACCC 59.406 45.833 0.00 0.00 0.00 3.69
2278 2753 9.950680 CAATTTGTTATATGATAGGTCCAACAC 57.049 33.333 0.00 0.00 0.00 3.32
2413 2888 2.417933 GAGATCTGCAATTGCTCAACGT 59.582 45.455 29.37 11.15 42.66 3.99
2455 2930 7.673926 TGGGATAGCTCCTTTTAACTGATTTTT 59.326 33.333 0.00 0.00 41.74 1.94
2467 2942 6.360618 CAATAGAACTTGGGATAGCTCCTTT 58.639 40.000 0.00 0.00 41.74 3.11
2565 3040 4.748277 TGTTAAGCCGCTAAGATTACCT 57.252 40.909 0.00 0.00 0.00 3.08
2568 3043 5.350365 CAGTGTTGTTAAGCCGCTAAGATTA 59.650 40.000 0.00 0.00 0.00 1.75
2577 3052 0.951558 AAGCCAGTGTTGTTAAGCCG 59.048 50.000 0.00 0.00 0.00 5.52
2587 3062 3.011119 TGTTTTCACGTAAAGCCAGTGT 58.989 40.909 0.00 0.00 37.20 3.55
2588 3063 3.684103 TGTTTTCACGTAAAGCCAGTG 57.316 42.857 0.00 0.00 37.24 3.66
2592 3067 3.297472 GAGCTTGTTTTCACGTAAAGCC 58.703 45.455 2.29 0.00 43.34 4.35
2594 3069 4.279659 GTGGAGCTTGTTTTCACGTAAAG 58.720 43.478 0.00 0.00 0.00 1.85
2595 3070 3.242478 CGTGGAGCTTGTTTTCACGTAAA 60.242 43.478 0.00 0.00 43.92 2.01
2602 3077 1.468914 GGATCCGTGGAGCTTGTTTTC 59.531 52.381 3.91 0.00 0.00 2.29
2603 3078 1.202879 TGGATCCGTGGAGCTTGTTTT 60.203 47.619 7.39 0.00 0.00 2.43
2638 3113 4.683832 ACCGTTAGATTCCTCAGATTTCG 58.316 43.478 0.00 0.00 0.00 3.46
2643 3118 5.187186 AGCTAAAACCGTTAGATTCCTCAGA 59.813 40.000 0.00 0.00 0.00 3.27
2648 3123 5.873164 TCAAGAGCTAAAACCGTTAGATTCC 59.127 40.000 0.00 0.00 0.00 3.01
2649 3124 6.453922 CGTCAAGAGCTAAAACCGTTAGATTC 60.454 42.308 0.00 0.00 0.00 2.52
2658 3133 2.467566 TCCCGTCAAGAGCTAAAACC 57.532 50.000 0.00 0.00 0.00 3.27
2666 3141 4.627467 CAGTGAAGTTATTCCCGTCAAGAG 59.373 45.833 0.00 0.00 34.28 2.85
2673 3148 1.379527 GGCCAGTGAAGTTATTCCCG 58.620 55.000 0.00 0.00 34.28 5.14
2702 3177 6.700960 CAGTCTTGCAAGATTACTGATAGAGG 59.299 42.308 29.48 11.05 37.39 3.69
2710 3185 5.411053 GCTTCTTCAGTCTTGCAAGATTACT 59.589 40.000 30.65 20.91 37.39 2.24
2721 3196 5.890985 TGCTAGATAGAGCTTCTTCAGTCTT 59.109 40.000 0.00 0.00 43.27 3.01
2723 3198 5.766150 TGCTAGATAGAGCTTCTTCAGTC 57.234 43.478 0.00 0.00 43.27 3.51
2725 3200 6.336566 TGTTTGCTAGATAGAGCTTCTTCAG 58.663 40.000 0.00 0.00 43.27 3.02
2729 3204 6.882656 TCATTGTTTGCTAGATAGAGCTTCT 58.117 36.000 0.00 0.00 43.27 2.85
2774 3249 9.574516 AACAGGTGTAGATAGTTCAGAAATTTT 57.425 29.630 0.00 0.00 0.00 1.82
2779 6059 8.644216 TGTAAAACAGGTGTAGATAGTTCAGAA 58.356 33.333 0.00 0.00 0.00 3.02
2881 6161 0.820891 CACTGCTCCACCACAAAGCT 60.821 55.000 0.00 0.00 36.96 3.74
2882 6162 1.656441 CACTGCTCCACCACAAAGC 59.344 57.895 0.00 0.00 36.56 3.51
2938 6218 6.896883 ACCAAGTAGTACAGTCTTCCTTTTT 58.103 36.000 2.52 0.00 0.00 1.94
2970 6250 4.487714 TGAAGCTAACCACAGGGATAAG 57.512 45.455 0.00 0.00 38.05 1.73
2979 6259 4.683832 ACGAGTGATATGAAGCTAACCAC 58.316 43.478 0.00 0.00 0.00 4.16
2985 6265 9.547753 AATTAACAATACGAGTGATATGAAGCT 57.452 29.630 0.00 0.00 0.00 3.74
3028 6308 0.110486 TCTTCTTGGTGTCTTGGCCC 59.890 55.000 0.00 0.00 0.00 5.80
3031 6311 2.260844 TGCTCTTCTTGGTGTCTTGG 57.739 50.000 0.00 0.00 0.00 3.61
3048 6328 6.698766 CCAGAATAAAGCAACAATAAGGATGC 59.301 38.462 0.00 0.00 39.06 3.91
3052 6332 5.964758 TGCCAGAATAAAGCAACAATAAGG 58.035 37.500 0.00 0.00 32.56 2.69
3067 6347 6.430007 AGTCTAGGAAAATGATTGCCAGAAT 58.570 36.000 0.00 0.00 36.59 2.40
3070 6350 6.429385 GGATAGTCTAGGAAAATGATTGCCAG 59.571 42.308 0.00 0.00 36.59 4.85
3077 6357 6.782988 CCCTGTAGGATAGTCTAGGAAAATGA 59.217 42.308 0.00 0.00 38.24 2.57
3093 6373 4.090090 GCTTGAGCTATATCCCTGTAGGA 58.910 47.826 0.00 0.00 43.50 2.94
3137 6417 1.351017 CTTCCTCTGCCAACCAGGTTA 59.649 52.381 3.89 0.00 42.05 2.85
3149 6429 1.546476 ACTGAACCGTAGCTTCCTCTG 59.454 52.381 0.00 0.00 0.00 3.35
3310 6590 9.016623 CATTATCTATTGTTGAACATGCTGTTG 57.983 33.333 0.00 0.00 41.28 3.33
3506 6787 3.119388 CGCAATGGACAATGGATCTTGTT 60.119 43.478 2.22 0.00 39.40 2.83
3531 6812 3.117738 AGGAGGATATTGCTGGGTTTCAG 60.118 47.826 0.00 0.00 46.03 3.02
3625 6918 2.608752 GCTGAACTTGAATGCCCAACTG 60.609 50.000 0.00 0.00 0.00 3.16
3626 6919 1.615392 GCTGAACTTGAATGCCCAACT 59.385 47.619 0.00 0.00 0.00 3.16
3627 6920 1.337167 GGCTGAACTTGAATGCCCAAC 60.337 52.381 0.00 0.00 37.81 3.77
3628 6921 0.968405 GGCTGAACTTGAATGCCCAA 59.032 50.000 0.00 0.00 37.81 4.12
3629 6922 0.112995 AGGCTGAACTTGAATGCCCA 59.887 50.000 0.00 0.00 44.19 5.36
3630 6923 0.813821 GAGGCTGAACTTGAATGCCC 59.186 55.000 0.00 0.00 44.19 5.36
3631 6924 1.538047 TGAGGCTGAACTTGAATGCC 58.462 50.000 0.00 0.00 43.52 4.40
3632 6925 2.555757 AGTTGAGGCTGAACTTGAATGC 59.444 45.455 13.85 0.00 28.94 3.56
3633 6926 4.276678 TGAAGTTGAGGCTGAACTTGAATG 59.723 41.667 31.91 0.00 42.42 2.67
3634 6927 4.464008 TGAAGTTGAGGCTGAACTTGAAT 58.536 39.130 31.91 12.25 42.42 2.57
3635 6928 3.879295 CTGAAGTTGAGGCTGAACTTGAA 59.121 43.478 31.91 19.93 42.42 2.69
3636 6929 3.134623 TCTGAAGTTGAGGCTGAACTTGA 59.865 43.478 31.91 24.19 42.42 3.02
3677 6970 7.566879 CCTGGAGCAATATATCCTATAGTTCCT 59.433 40.741 0.00 0.00 36.50 3.36
3706 6999 8.843885 ACACAAATATATGATGTGGAGATGAG 57.156 34.615 24.63 7.80 46.67 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.