Multiple sequence alignment - TraesCS1D01G397200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G397200 chr1D 100.000 3543 0 0 1 3543 464928062 464931604 0.000000e+00 6543.0
1 TraesCS1D01G397200 chr1D 98.077 416 8 0 3128 3543 15688414 15687999 0.000000e+00 725.0
2 TraesCS1D01G397200 chr1D 88.462 156 18 0 3128 3283 15687688 15687843 4.670000e-44 189.0
3 TraesCS1D01G397200 chr1A 92.172 792 30 9 1805 2566 557294327 557295116 0.000000e+00 1090.0
4 TraesCS1D01G397200 chr1A 87.928 671 47 9 94 736 372286030 372286694 0.000000e+00 760.0
5 TraesCS1D01G397200 chr1A 88.084 663 22 11 804 1456 557291237 557291852 0.000000e+00 734.0
6 TraesCS1D01G397200 chr1A 89.024 246 11 6 1565 1809 557294034 557294264 1.240000e-74 291.0
7 TraesCS1D01G397200 chr1A 84.186 215 30 3 2860 3071 518813178 518813391 4.640000e-49 206.0
8 TraesCS1D01G397200 chr1A 83.041 171 23 6 92 259 208681244 208681411 2.200000e-32 150.0
9 TraesCS1D01G397200 chr1A 97.468 79 2 0 736 814 557291144 557291222 6.170000e-28 135.0
10 TraesCS1D01G397200 chr1B 88.734 719 32 12 736 1447 641922441 641923117 0.000000e+00 833.0
11 TraesCS1D01G397200 chr1B 95.205 438 13 4 1805 2236 641923347 641923782 0.000000e+00 686.0
12 TraesCS1D01G397200 chr1B 92.857 462 23 5 2268 2719 641923889 641924350 0.000000e+00 662.0
13 TraesCS1D01G397200 chr1B 95.385 260 12 0 2736 2995 641936634 641936893 7.080000e-112 414.0
14 TraesCS1D01G397200 chr1B 90.000 170 9 3 1641 1809 641923122 641923284 2.770000e-51 213.0
15 TraesCS1D01G397200 chr1B 82.629 213 33 4 2861 3071 571712410 571712620 6.040000e-43 185.0
16 TraesCS1D01G397200 chr1B 89.381 113 11 1 3128 3239 141760483 141760371 1.330000e-29 141.0
17 TraesCS1D01G397200 chr1B 89.796 98 9 1 1 97 641868707 641868804 1.340000e-24 124.0
18 TraesCS1D01G397200 chr1B 100.000 36 0 0 3091 3126 641936995 641937030 2.280000e-07 67.6
19 TraesCS1D01G397200 chr5B 87.860 659 53 12 96 733 267667031 267667683 0.000000e+00 749.0
20 TraesCS1D01G397200 chr5B 85.294 170 19 6 93 259 323892221 323892055 1.690000e-38 171.0
21 TraesCS1D01G397200 chr3B 87.462 662 53 12 94 733 810628238 810628891 0.000000e+00 736.0
22 TraesCS1D01G397200 chr3B 94.769 325 17 0 3128 3452 799298023 799298347 1.130000e-139 507.0
23 TraesCS1D01G397200 chr3B 94.769 325 17 0 3128 3452 799298616 799298940 1.130000e-139 507.0
24 TraesCS1D01G397200 chr3B 91.620 358 28 2 322 679 472654309 472653954 8.840000e-136 494.0
25 TraesCS1D01G397200 chr3B 76.540 682 96 27 94 735 626251121 626250464 7.380000e-82 315.0
26 TraesCS1D01G397200 chr3B 92.308 104 1 3 3440 3543 799299294 799299390 1.330000e-29 141.0
27 TraesCS1D01G397200 chr3B 94.872 39 1 1 2293 2330 608544533 608544571 3.820000e-05 60.2
28 TraesCS1D01G397200 chr2D 97.837 416 9 0 3128 3543 554474940 554474525 0.000000e+00 719.0
29 TraesCS1D01G397200 chr2D 98.025 405 8 0 3138 3542 314505116 314504712 0.000000e+00 704.0
30 TraesCS1D01G397200 chr2D 80.781 333 48 11 417 736 100781631 100781960 2.730000e-61 246.0
31 TraesCS1D01G397200 chr7A 91.176 442 34 5 296 736 514818760 514818323 2.350000e-166 595.0
32 TraesCS1D01G397200 chr7B 95.077 325 16 0 3128 3452 579409959 579409635 2.440000e-141 512.0
33 TraesCS1D01G397200 chr7B 92.308 104 1 3 3440 3543 579409281 579409185 1.330000e-29 141.0
34 TraesCS1D01G397200 chr6A 90.370 270 25 1 3128 3397 2444714 2444446 1.560000e-93 353.0
35 TraesCS1D01G397200 chr5D 85.465 344 36 10 402 736 224874403 224874065 2.620000e-91 346.0
36 TraesCS1D01G397200 chr4D 95.833 168 7 0 249 416 423981421 423981254 4.510000e-69 272.0
37 TraesCS1D01G397200 chr4D 89.362 47 3 2 2287 2331 353699979 353699933 1.370000e-04 58.4
38 TraesCS1D01G397200 chr6B 81.977 344 38 14 402 734 126289373 126289043 1.620000e-68 270.0
39 TraesCS1D01G397200 chr6B 88.679 53 3 3 2276 2327 507405985 507405935 1.060000e-05 62.1
40 TraesCS1D01G397200 chr7D 82.428 313 39 11 435 736 180831780 180831473 3.510000e-65 259.0
41 TraesCS1D01G397200 chr7D 84.663 163 24 1 2861 3023 25204334 25204495 1.020000e-35 161.0
42 TraesCS1D01G397200 chr7D 81.875 160 23 6 93 249 603601774 603601618 2.870000e-26 130.0
43 TraesCS1D01G397200 chr7D 91.111 45 1 2 2286 2328 131747197 131747240 1.370000e-04 58.4
44 TraesCS1D01G397200 chr5A 84.862 218 26 6 2858 3071 639208636 639208850 2.770000e-51 213.0
45 TraesCS1D01G397200 chr5A 90.476 63 0 4 3481 3543 683670542 683670486 1.050000e-10 78.7
46 TraesCS1D01G397200 chr5A 88.889 63 2 3 3481 3543 681766527 681766470 4.910000e-09 73.1
47 TraesCS1D01G397200 chr5A 87.302 63 3 3 3481 3543 683745508 683745565 2.280000e-07 67.6
48 TraesCS1D01G397200 chr5A 95.122 41 1 1 2293 2332 476847030 476847070 2.950000e-06 63.9
49 TraesCS1D01G397200 chr2A 78.495 279 35 11 93 349 475794521 475794796 3.660000e-35 159.0
50 TraesCS1D01G397200 chr4A 84.906 159 21 3 93 249 574518124 574518281 1.320000e-34 158.0
51 TraesCS1D01G397200 chr4A 92.857 42 1 2 2289 2328 47742613 47742572 3.820000e-05 60.2
52 TraesCS1D01G397200 chr2B 81.871 171 24 7 92 259 424319083 424319249 1.720000e-28 137.0
53 TraesCS1D01G397200 chr4B 81.188 101 16 3 108 206 619095416 619095317 1.050000e-10 78.7
54 TraesCS1D01G397200 chr4B 80.198 101 17 3 108 206 627339636 627339537 4.910000e-09 73.1
55 TraesCS1D01G397200 chr4B 94.737 38 2 0 2289 2326 417133583 417133620 3.820000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G397200 chr1D 464928062 464931604 3542 False 6543.0 6543 100.000000 1 3543 1 chr1D.!!$F2 3542
1 TraesCS1D01G397200 chr1A 372286030 372286694 664 False 760.0 760 87.928000 94 736 1 chr1A.!!$F2 642
2 TraesCS1D01G397200 chr1A 557291144 557295116 3972 False 562.5 1090 91.687000 736 2566 4 chr1A.!!$F4 1830
3 TraesCS1D01G397200 chr1B 641922441 641924350 1909 False 598.5 833 91.699000 736 2719 4 chr1B.!!$F3 1983
4 TraesCS1D01G397200 chr5B 267667031 267667683 652 False 749.0 749 87.860000 96 733 1 chr5B.!!$F1 637
5 TraesCS1D01G397200 chr3B 810628238 810628891 653 False 736.0 736 87.462000 94 733 1 chr3B.!!$F2 639
6 TraesCS1D01G397200 chr3B 799298023 799299390 1367 False 385.0 507 93.948667 3128 3543 3 chr3B.!!$F3 415
7 TraesCS1D01G397200 chr3B 626250464 626251121 657 True 315.0 315 76.540000 94 735 1 chr3B.!!$R2 641
8 TraesCS1D01G397200 chr7B 579409185 579409959 774 True 326.5 512 93.692500 3128 3543 2 chr7B.!!$R1 415

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
828 930 0.111134 CGCACGATATTGATGCACGG 60.111 55.0 14.15 0.39 39.39 4.94 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2750 5128 0.593773 GCACACGCGTTCCACAAATT 60.594 50.0 10.22 0.0 0.0 1.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 9.905713 AATAAGCTCCTACAAAGATAAACATGA 57.094 29.630 0.00 0.00 0.00 3.07
30 31 9.905713 ATAAGCTCCTACAAAGATAAACATGAA 57.094 29.630 0.00 0.00 0.00 2.57
31 32 8.635765 AAGCTCCTACAAAGATAAACATGAAA 57.364 30.769 0.00 0.00 0.00 2.69
32 33 8.273780 AGCTCCTACAAAGATAAACATGAAAG 57.726 34.615 0.00 0.00 0.00 2.62
33 34 8.103305 AGCTCCTACAAAGATAAACATGAAAGA 58.897 33.333 0.00 0.00 0.00 2.52
34 35 8.730680 GCTCCTACAAAGATAAACATGAAAGAA 58.269 33.333 0.00 0.00 0.00 2.52
40 41 9.965824 ACAAAGATAAACATGAAAGAAAACGAT 57.034 25.926 0.00 0.00 0.00 3.73
57 58 9.796120 AGAAAACGATAAAACAAATGTTTGAGA 57.204 25.926 11.94 2.40 46.47 3.27
58 59 9.829637 GAAAACGATAAAACAAATGTTTGAGAC 57.170 29.630 11.94 3.58 46.47 3.36
59 60 9.581099 AAAACGATAAAACAAATGTTTGAGACT 57.419 25.926 11.94 0.00 46.47 3.24
60 61 8.560576 AACGATAAAACAAATGTTTGAGACTG 57.439 30.769 11.94 4.19 46.47 3.51
61 62 7.925993 ACGATAAAACAAATGTTTGAGACTGA 58.074 30.769 11.94 0.00 46.47 3.41
62 63 7.855904 ACGATAAAACAAATGTTTGAGACTGAC 59.144 33.333 11.94 0.00 46.47 3.51
63 64 8.070171 CGATAAAACAAATGTTTGAGACTGACT 58.930 33.333 11.94 0.00 46.47 3.41
90 91 3.567478 ACCAATAAGAGTCATGAGGCC 57.433 47.619 0.00 0.00 0.00 5.19
91 92 3.118531 ACCAATAAGAGTCATGAGGCCT 58.881 45.455 3.86 3.86 0.00 5.19
92 93 4.298626 ACCAATAAGAGTCATGAGGCCTA 58.701 43.478 4.42 0.00 0.00 3.93
125 127 6.868622 TGGCAGCAAAGTTTTTAGAAAACTA 58.131 32.000 16.48 0.00 39.36 2.24
168 170 2.046285 CCATGGGTGGGCGAGAAAC 61.046 63.158 2.85 0.00 42.11 2.78
225 228 7.094549 GGTTTTACATGTGTTTAGATGGTGCTA 60.095 37.037 9.11 0.00 32.16 3.49
351 401 6.549242 TCCGTAGAATATGTCTATCCCTTGA 58.451 40.000 0.00 0.00 41.00 3.02
394 448 5.654650 GGTGAAGAGAAGAGATGGAGACTAA 59.345 44.000 0.00 0.00 0.00 2.24
426 485 6.496338 AAACAAATCTAACTGAATCGGTCC 57.504 37.500 0.00 0.00 0.00 4.46
451 510 9.574458 CCAGGAGATATAATACATGTCGTTTAG 57.426 37.037 0.00 0.00 0.00 1.85
714 791 0.519519 CGCGGTATTGCCAGAAAACA 59.480 50.000 0.00 0.00 36.97 2.83
828 930 0.111134 CGCACGATATTGATGCACGG 60.111 55.000 14.15 0.39 39.39 4.94
1062 1176 3.775654 CTCCAGCGAGGTGGACCC 61.776 72.222 18.85 0.00 41.99 4.46
1136 1250 1.827315 CGCGCTCTCCTCTCTCGTAG 61.827 65.000 5.56 0.00 0.00 3.51
1248 1364 2.386661 TTTTCCTCTTAGCTGAGCCG 57.613 50.000 0.00 0.00 33.02 5.52
1251 1368 1.557099 TCCTCTTAGCTGAGCCGAAA 58.443 50.000 0.00 0.00 33.02 3.46
1296 1413 5.478679 TCTTTCGCCTAATTGGGATTGAAAA 59.521 36.000 12.81 6.70 36.00 2.29
1297 1414 5.730296 TTCGCCTAATTGGGATTGAAAAA 57.270 34.783 12.81 0.00 36.00 1.94
1340 1457 0.721718 CAAGTAGCAACGCCTAGTGC 59.278 55.000 0.00 0.00 0.00 4.40
1382 1499 7.158021 TGTTTTTATATTTTTGTGGGAGGCAG 58.842 34.615 0.00 0.00 0.00 4.85
1400 1517 5.669477 AGGCAGCAGTAAAATTTTCAACAA 58.331 33.333 6.72 0.00 0.00 2.83
1413 1535 4.487714 TTTCAACAATCCTATCGGCTCT 57.512 40.909 0.00 0.00 0.00 4.09
1464 1727 0.245539 TCGGAAACTAACTCCTGGCG 59.754 55.000 0.00 0.00 0.00 5.69
1478 1741 3.649073 TCCTGGCGATATTGTCAATACG 58.351 45.455 7.44 13.18 0.00 3.06
1484 1747 3.365220 GCGATATTGTCAATACGCTCCTC 59.635 47.826 27.10 14.05 39.02 3.71
1511 1774 3.088532 TGCACTCAACAAGTTCAGGTTT 58.911 40.909 0.00 0.00 35.45 3.27
1517 1780 4.016444 TCAACAAGTTCAGGTTTTCTGCT 58.984 39.130 0.00 0.00 43.06 4.24
1519 1782 4.639135 ACAAGTTCAGGTTTTCTGCTTC 57.361 40.909 0.00 0.00 43.06 3.86
1520 1783 4.273318 ACAAGTTCAGGTTTTCTGCTTCT 58.727 39.130 0.00 0.00 43.06 2.85
1521 1784 4.336713 ACAAGTTCAGGTTTTCTGCTTCTC 59.663 41.667 0.00 0.00 43.06 2.87
1522 1785 4.429854 AGTTCAGGTTTTCTGCTTCTCT 57.570 40.909 0.00 0.00 43.06 3.10
1524 1787 4.102367 AGTTCAGGTTTTCTGCTTCTCTCT 59.898 41.667 0.00 0.00 43.06 3.10
1525 1788 4.000331 TCAGGTTTTCTGCTTCTCTCTG 58.000 45.455 0.00 0.00 43.06 3.35
1528 1791 4.578105 CAGGTTTTCTGCTTCTCTCTGTTT 59.422 41.667 0.00 0.00 36.60 2.83
1529 1792 4.819088 AGGTTTTCTGCTTCTCTCTGTTTC 59.181 41.667 0.00 0.00 0.00 2.78
1530 1793 4.023622 GGTTTTCTGCTTCTCTCTGTTTCC 60.024 45.833 0.00 0.00 0.00 3.13
1531 1794 4.422073 TTTCTGCTTCTCTCTGTTTCCA 57.578 40.909 0.00 0.00 0.00 3.53
1532 1795 4.422073 TTCTGCTTCTCTCTGTTTCCAA 57.578 40.909 0.00 0.00 0.00 3.53
1535 1798 4.101585 TCTGCTTCTCTCTGTTTCCAAAGA 59.898 41.667 0.00 0.00 0.00 2.52
1536 1799 4.130118 TGCTTCTCTCTGTTTCCAAAGAC 58.870 43.478 0.00 0.00 0.00 3.01
1537 1800 4.141620 TGCTTCTCTCTGTTTCCAAAGACT 60.142 41.667 0.00 0.00 0.00 3.24
1538 1801 4.450757 GCTTCTCTCTGTTTCCAAAGACTC 59.549 45.833 0.00 0.00 0.00 3.36
1541 1804 1.801178 CTCTGTTTCCAAAGACTCGGC 59.199 52.381 0.00 0.00 0.00 5.54
1543 1806 2.154462 CTGTTTCCAAAGACTCGGCAT 58.846 47.619 0.00 0.00 0.00 4.40
1544 1807 2.554032 CTGTTTCCAAAGACTCGGCATT 59.446 45.455 0.00 0.00 0.00 3.56
1545 1808 3.745799 TGTTTCCAAAGACTCGGCATTA 58.254 40.909 0.00 0.00 0.00 1.90
1555 2283 0.521242 CTCGGCATTACGTTGCTTGC 60.521 55.000 11.73 7.51 42.38 4.01
1556 2284 0.953471 TCGGCATTACGTTGCTTGCT 60.953 50.000 11.73 0.00 42.38 3.91
1557 2285 0.109781 CGGCATTACGTTGCTTGCTT 60.110 50.000 11.73 0.00 42.38 3.91
1558 2286 1.617740 GGCATTACGTTGCTTGCTTC 58.382 50.000 11.73 0.00 42.38 3.86
1559 2287 1.617740 GCATTACGTTGCTTGCTTCC 58.382 50.000 4.97 0.00 39.57 3.46
1560 2288 1.068610 GCATTACGTTGCTTGCTTCCA 60.069 47.619 4.97 0.00 39.57 3.53
1562 2290 1.669604 TTACGTTGCTTGCTTCCACA 58.330 45.000 0.00 0.00 0.00 4.17
1563 2291 0.941542 TACGTTGCTTGCTTCCACAC 59.058 50.000 0.00 0.00 0.00 3.82
1571 3766 1.939934 CTTGCTTCCACACAAGTTCGA 59.060 47.619 0.00 0.00 38.75 3.71
1583 3778 2.660258 AAGTTCGACGCAACCAGGCT 62.660 55.000 0.00 0.00 0.00 4.58
1584 3779 2.110213 TTCGACGCAACCAGGCTT 59.890 55.556 0.00 0.00 0.00 4.35
1585 3780 1.525077 TTCGACGCAACCAGGCTTT 60.525 52.632 0.00 0.00 0.00 3.51
1586 3781 1.098712 TTCGACGCAACCAGGCTTTT 61.099 50.000 0.00 0.00 0.00 2.27
1664 3859 5.753438 TGAGCGATGATTAAACCATGTCTAC 59.247 40.000 0.00 0.00 0.00 2.59
1747 3943 0.518636 CATGCCGAGGTGTGAAGTTG 59.481 55.000 0.00 0.00 0.00 3.16
1760 3956 1.271871 TGAAGTTGCAATCCATCCCGT 60.272 47.619 0.59 0.00 0.00 5.28
1761 3957 2.026729 TGAAGTTGCAATCCATCCCGTA 60.027 45.455 0.59 0.00 0.00 4.02
1762 3958 2.038387 AGTTGCAATCCATCCCGTAC 57.962 50.000 0.59 0.00 0.00 3.67
1763 3959 1.559682 AGTTGCAATCCATCCCGTACT 59.440 47.619 0.59 0.00 0.00 2.73
1764 3960 1.940613 GTTGCAATCCATCCCGTACTC 59.059 52.381 0.59 0.00 0.00 2.59
1765 3961 0.104120 TGCAATCCATCCCGTACTCG 59.896 55.000 0.00 0.00 0.00 4.18
1787 3983 1.064803 CGATCCGAGGACTGAAGTCTG 59.935 57.143 10.17 1.62 44.20 3.51
1812 4075 3.153369 TGAAAGCCAACCAAGCAGATA 57.847 42.857 0.00 0.00 0.00 1.98
1834 4097 1.070758 ACCTCGAGCAGTGTCAATGTT 59.929 47.619 6.99 0.00 0.00 2.71
1843 4111 1.165270 GTGTCAATGTTTCCCCTCCG 58.835 55.000 0.00 0.00 0.00 4.63
2110 4381 1.211456 CAAATCTCTCCTGGGAGGCT 58.789 55.000 15.66 0.00 42.20 4.58
2146 4417 2.946762 GCCACTCGACTTGTTGGC 59.053 61.111 0.00 0.00 35.20 4.52
2266 4625 1.787012 GGTTGGACGAAGCGTTCTAA 58.213 50.000 0.00 0.00 41.37 2.10
2321 4690 7.472741 TCCCTTCGTCCCATAATATAAGAGTA 58.527 38.462 0.00 0.00 0.00 2.59
2560 4931 6.151144 GGACATGAACTAGCACCATTTAAGTT 59.849 38.462 0.00 0.00 33.26 2.66
2584 4960 8.590470 GTTAAAATAGTACTAAGACGTCTTGGC 58.410 37.037 35.24 22.08 37.89 4.52
2595 4971 4.694339 AGACGTCTTGGCTAAATGTATCC 58.306 43.478 13.58 0.00 0.00 2.59
2600 4976 5.921408 CGTCTTGGCTAAATGTATCCTAGTC 59.079 44.000 0.00 0.00 0.00 2.59
2623 4999 5.918011 TCATTAGATTGTTTCCGTTGTTTGC 59.082 36.000 0.00 0.00 0.00 3.68
2629 5005 7.305474 AGATTGTTTCCGTTGTTTGCTATAAG 58.695 34.615 0.00 0.00 0.00 1.73
2631 5007 4.822896 TGTTTCCGTTGTTTGCTATAAGGT 59.177 37.500 0.00 0.00 0.00 3.50
2632 5008 5.996513 TGTTTCCGTTGTTTGCTATAAGGTA 59.003 36.000 0.00 0.00 0.00 3.08
2633 5009 6.073112 TGTTTCCGTTGTTTGCTATAAGGTAC 60.073 38.462 0.00 0.00 0.00 3.34
2666 5044 2.203209 CCGGCCTGGGTTAGATGC 60.203 66.667 0.00 0.00 0.00 3.91
2671 5049 1.340991 GGCCTGGGTTAGATGCTGAAA 60.341 52.381 0.00 0.00 0.00 2.69
2703 5081 8.632679 TGCAATTCTAGTTCTGTTTTTCATCTT 58.367 29.630 0.00 0.00 0.00 2.40
2721 5099 8.731275 TTCATCTTCTGAAGTTGTAGTTTTCA 57.269 30.769 21.56 4.12 38.97 2.69
2722 5100 8.731275 TCATCTTCTGAAGTTGTAGTTTTCAA 57.269 30.769 21.56 3.57 31.11 2.69
2723 5101 9.173021 TCATCTTCTGAAGTTGTAGTTTTCAAA 57.827 29.630 21.56 3.01 31.11 2.69
2724 5102 9.787532 CATCTTCTGAAGTTGTAGTTTTCAAAA 57.212 29.630 16.43 0.00 31.11 2.44
2762 5140 8.844441 TTCTTAAGTTGTAAATTTGTGGAACG 57.156 30.769 0.00 0.00 42.39 3.95
2763 5141 6.913673 TCTTAAGTTGTAAATTTGTGGAACGC 59.086 34.615 0.00 0.00 42.39 4.84
2764 5142 3.623863 AGTTGTAAATTTGTGGAACGCG 58.376 40.909 3.53 3.53 45.01 6.01
2765 5143 3.065648 AGTTGTAAATTTGTGGAACGCGT 59.934 39.130 5.58 5.58 45.01 6.01
2766 5144 2.988343 TGTAAATTTGTGGAACGCGTG 58.012 42.857 14.98 0.00 45.01 5.34
2767 5145 2.355132 TGTAAATTTGTGGAACGCGTGT 59.645 40.909 14.98 2.40 45.01 4.49
2768 5146 1.833860 AAATTTGTGGAACGCGTGTG 58.166 45.000 14.98 0.00 45.01 3.82
2769 5147 0.593773 AATTTGTGGAACGCGTGTGC 60.594 50.000 14.98 9.32 45.01 4.57
2770 5148 2.400896 ATTTGTGGAACGCGTGTGCC 62.401 55.000 19.95 19.95 45.17 5.01
2805 5183 4.891727 CGCAATCGCTAGGCCGGT 62.892 66.667 1.90 0.00 35.30 5.28
2806 5184 2.967615 GCAATCGCTAGGCCGGTC 60.968 66.667 0.00 0.00 34.30 4.79
2807 5185 2.658593 CAATCGCTAGGCCGGTCG 60.659 66.667 1.90 1.64 0.00 4.79
2808 5186 4.587189 AATCGCTAGGCCGGTCGC 62.587 66.667 1.90 0.00 0.00 5.19
2820 5198 2.739671 GGTCGCCGCTTAACCGTT 60.740 61.111 0.00 0.00 0.00 4.44
2821 5199 2.472934 GTCGCCGCTTAACCGTTG 59.527 61.111 0.00 0.00 0.00 4.10
2822 5200 2.739287 TCGCCGCTTAACCGTTGG 60.739 61.111 0.00 0.00 0.00 3.77
2823 5201 2.739287 CGCCGCTTAACCGTTGGA 60.739 61.111 0.00 0.00 0.00 3.53
2824 5202 2.104253 CGCCGCTTAACCGTTGGAT 61.104 57.895 0.00 0.00 0.00 3.41
2825 5203 1.641123 CGCCGCTTAACCGTTGGATT 61.641 55.000 0.00 0.00 0.00 3.01
2826 5204 1.371595 GCCGCTTAACCGTTGGATTA 58.628 50.000 0.00 0.00 0.00 1.75
2827 5205 1.738908 GCCGCTTAACCGTTGGATTAA 59.261 47.619 0.00 0.00 0.00 1.40
2828 5206 2.223180 GCCGCTTAACCGTTGGATTAAG 60.223 50.000 0.00 10.77 40.08 1.85
2832 5210 4.616181 CTTAACCGTTGGATTAAGCCAG 57.384 45.455 13.02 4.21 39.52 4.85
2833 5211 2.871096 AACCGTTGGATTAAGCCAGA 57.129 45.000 13.02 1.64 39.52 3.86
2834 5212 2.109425 ACCGTTGGATTAAGCCAGAC 57.891 50.000 13.02 12.59 39.52 3.51
2835 5213 1.628846 ACCGTTGGATTAAGCCAGACT 59.371 47.619 13.02 0.00 39.52 3.24
2836 5214 2.009774 CCGTTGGATTAAGCCAGACTG 58.990 52.381 13.02 7.21 39.52 3.51
2837 5215 1.398390 CGTTGGATTAAGCCAGACTGC 59.602 52.381 13.02 2.02 39.52 4.40
2838 5216 1.398390 GTTGGATTAAGCCAGACTGCG 59.602 52.381 13.02 0.00 39.52 5.18
2839 5217 0.744414 TGGATTAAGCCAGACTGCGC 60.744 55.000 8.76 0.00 36.02 6.09
2840 5218 1.440145 GGATTAAGCCAGACTGCGCC 61.440 60.000 4.18 0.00 36.02 6.53
2841 5219 1.766143 GATTAAGCCAGACTGCGCCG 61.766 60.000 4.18 0.00 36.02 6.46
2842 5220 2.521958 ATTAAGCCAGACTGCGCCGT 62.522 55.000 3.38 3.38 36.02 5.68
2843 5221 2.725203 TTAAGCCAGACTGCGCCGTT 62.725 55.000 5.77 0.00 36.02 4.44
2846 5224 4.680237 CCAGACTGCGCCGTTGGA 62.680 66.667 20.36 0.00 0.00 3.53
2847 5225 2.434884 CAGACTGCGCCGTTGGAT 60.435 61.111 5.77 0.00 0.00 3.41
2848 5226 2.434884 AGACTGCGCCGTTGGATG 60.435 61.111 5.77 0.00 0.00 3.51
2849 5227 2.742372 GACTGCGCCGTTGGATGT 60.742 61.111 5.77 0.00 0.00 3.06
2850 5228 2.740714 GACTGCGCCGTTGGATGTC 61.741 63.158 5.77 0.00 0.00 3.06
2851 5229 2.434884 CTGCGCCGTTGGATGTCT 60.435 61.111 4.18 0.00 0.00 3.41
2852 5230 2.031919 TGCGCCGTTGGATGTCTT 59.968 55.556 4.18 0.00 0.00 3.01
2853 5231 1.577328 CTGCGCCGTTGGATGTCTTT 61.577 55.000 4.18 0.00 0.00 2.52
2854 5232 1.134694 GCGCCGTTGGATGTCTTTC 59.865 57.895 0.00 0.00 0.00 2.62
2855 5233 1.794222 CGCCGTTGGATGTCTTTCC 59.206 57.895 0.00 0.00 36.24 3.13
2856 5234 0.673644 CGCCGTTGGATGTCTTTCCT 60.674 55.000 0.00 0.00 36.68 3.36
2857 5235 1.087501 GCCGTTGGATGTCTTTCCTC 58.912 55.000 0.00 0.00 36.68 3.71
2858 5236 1.339151 GCCGTTGGATGTCTTTCCTCT 60.339 52.381 0.00 0.00 36.68 3.69
2859 5237 2.093658 GCCGTTGGATGTCTTTCCTCTA 60.094 50.000 0.00 0.00 36.68 2.43
2860 5238 3.618997 GCCGTTGGATGTCTTTCCTCTAA 60.619 47.826 0.00 0.00 36.68 2.10
2861 5239 4.575885 CCGTTGGATGTCTTTCCTCTAAA 58.424 43.478 0.00 0.00 36.68 1.85
2862 5240 5.186198 CCGTTGGATGTCTTTCCTCTAAAT 58.814 41.667 0.00 0.00 36.68 1.40
2863 5241 5.294552 CCGTTGGATGTCTTTCCTCTAAATC 59.705 44.000 0.00 0.00 36.68 2.17
2864 5242 5.874810 CGTTGGATGTCTTTCCTCTAAATCA 59.125 40.000 0.00 0.00 36.68 2.57
2865 5243 6.540189 CGTTGGATGTCTTTCCTCTAAATCAT 59.460 38.462 0.00 0.00 36.68 2.45
2866 5244 7.254590 CGTTGGATGTCTTTCCTCTAAATCATC 60.255 40.741 0.00 0.00 37.46 2.92
2867 5245 7.443302 TGGATGTCTTTCCTCTAAATCATCT 57.557 36.000 0.00 0.00 37.84 2.90
2868 5246 7.504403 TGGATGTCTTTCCTCTAAATCATCTC 58.496 38.462 0.00 0.00 37.84 2.75
2869 5247 6.934083 GGATGTCTTTCCTCTAAATCATCTCC 59.066 42.308 0.00 0.00 37.84 3.71
2870 5248 7.202084 GGATGTCTTTCCTCTAAATCATCTCCT 60.202 40.741 0.00 0.00 37.84 3.69
2871 5249 7.502060 TGTCTTTCCTCTAAATCATCTCCTT 57.498 36.000 0.00 0.00 0.00 3.36
2872 5250 7.560368 TGTCTTTCCTCTAAATCATCTCCTTC 58.440 38.462 0.00 0.00 0.00 3.46
2873 5251 6.989759 GTCTTTCCTCTAAATCATCTCCTTCC 59.010 42.308 0.00 0.00 0.00 3.46
2874 5252 6.905776 TCTTTCCTCTAAATCATCTCCTTCCT 59.094 38.462 0.00 0.00 0.00 3.36
2875 5253 6.739331 TTCCTCTAAATCATCTCCTTCCTC 57.261 41.667 0.00 0.00 0.00 3.71
2876 5254 6.036926 TCCTCTAAATCATCTCCTTCCTCT 57.963 41.667 0.00 0.00 0.00 3.69
2877 5255 6.074648 TCCTCTAAATCATCTCCTTCCTCTC 58.925 44.000 0.00 0.00 0.00 3.20
2878 5256 5.048083 CCTCTAAATCATCTCCTTCCTCTCG 60.048 48.000 0.00 0.00 0.00 4.04
2879 5257 3.467374 AAATCATCTCCTTCCTCTCGC 57.533 47.619 0.00 0.00 0.00 5.03
2880 5258 2.380064 ATCATCTCCTTCCTCTCGCT 57.620 50.000 0.00 0.00 0.00 4.93
2881 5259 2.151502 TCATCTCCTTCCTCTCGCTT 57.848 50.000 0.00 0.00 0.00 4.68
2882 5260 2.461695 TCATCTCCTTCCTCTCGCTTT 58.538 47.619 0.00 0.00 0.00 3.51
2883 5261 3.632333 TCATCTCCTTCCTCTCGCTTTA 58.368 45.455 0.00 0.00 0.00 1.85
2884 5262 3.634448 TCATCTCCTTCCTCTCGCTTTAG 59.366 47.826 0.00 0.00 0.00 1.85
2885 5263 3.088789 TCTCCTTCCTCTCGCTTTAGT 57.911 47.619 0.00 0.00 0.00 2.24
2886 5264 3.018149 TCTCCTTCCTCTCGCTTTAGTC 58.982 50.000 0.00 0.00 0.00 2.59
2887 5265 2.755655 CTCCTTCCTCTCGCTTTAGTCA 59.244 50.000 0.00 0.00 0.00 3.41
2888 5266 3.162666 TCCTTCCTCTCGCTTTAGTCAA 58.837 45.455 0.00 0.00 0.00 3.18
2889 5267 3.056749 TCCTTCCTCTCGCTTTAGTCAAC 60.057 47.826 0.00 0.00 0.00 3.18
2890 5268 2.631418 TCCTCTCGCTTTAGTCAACG 57.369 50.000 0.00 0.00 0.00 4.10
2891 5269 1.884579 TCCTCTCGCTTTAGTCAACGT 59.115 47.619 0.00 0.00 0.00 3.99
2892 5270 3.076621 TCCTCTCGCTTTAGTCAACGTA 58.923 45.455 0.00 0.00 0.00 3.57
2893 5271 3.120060 TCCTCTCGCTTTAGTCAACGTAC 60.120 47.826 0.00 0.00 0.00 3.67
2894 5272 3.365666 CCTCTCGCTTTAGTCAACGTACA 60.366 47.826 0.00 0.00 0.00 2.90
2895 5273 3.558505 TCTCGCTTTAGTCAACGTACAC 58.441 45.455 0.00 0.00 0.00 2.90
2896 5274 3.003585 TCTCGCTTTAGTCAACGTACACA 59.996 43.478 0.00 0.00 0.00 3.72
2897 5275 3.302555 TCGCTTTAGTCAACGTACACAG 58.697 45.455 0.00 0.00 0.00 3.66
2898 5276 3.003585 TCGCTTTAGTCAACGTACACAGA 59.996 43.478 0.00 0.00 0.00 3.41
2899 5277 3.732219 CGCTTTAGTCAACGTACACAGAA 59.268 43.478 0.00 0.00 0.00 3.02
2900 5278 4.207635 CGCTTTAGTCAACGTACACAGAAA 59.792 41.667 0.00 0.00 0.00 2.52
2901 5279 5.107607 CGCTTTAGTCAACGTACACAGAAAT 60.108 40.000 0.00 0.00 0.00 2.17
2902 5280 6.297353 GCTTTAGTCAACGTACACAGAAATC 58.703 40.000 0.00 0.00 0.00 2.17
2903 5281 6.617953 GCTTTAGTCAACGTACACAGAAATCC 60.618 42.308 0.00 0.00 0.00 3.01
2904 5282 3.660865 AGTCAACGTACACAGAAATCCC 58.339 45.455 0.00 0.00 0.00 3.85
2905 5283 3.070446 AGTCAACGTACACAGAAATCCCA 59.930 43.478 0.00 0.00 0.00 4.37
2906 5284 4.000988 GTCAACGTACACAGAAATCCCAT 58.999 43.478 0.00 0.00 0.00 4.00
2907 5285 4.092968 GTCAACGTACACAGAAATCCCATC 59.907 45.833 0.00 0.00 0.00 3.51
2908 5286 3.261981 ACGTACACAGAAATCCCATCC 57.738 47.619 0.00 0.00 0.00 3.51
2909 5287 2.838202 ACGTACACAGAAATCCCATCCT 59.162 45.455 0.00 0.00 0.00 3.24
2910 5288 3.263425 ACGTACACAGAAATCCCATCCTT 59.737 43.478 0.00 0.00 0.00 3.36
2911 5289 3.871594 CGTACACAGAAATCCCATCCTTC 59.128 47.826 0.00 0.00 0.00 3.46
2912 5290 3.372440 ACACAGAAATCCCATCCTTCC 57.628 47.619 0.00 0.00 0.00 3.46
2913 5291 2.649312 ACACAGAAATCCCATCCTTCCA 59.351 45.455 0.00 0.00 0.00 3.53
2914 5292 3.019564 CACAGAAATCCCATCCTTCCAC 58.980 50.000 0.00 0.00 0.00 4.02
2915 5293 2.922283 ACAGAAATCCCATCCTTCCACT 59.078 45.455 0.00 0.00 0.00 4.00
2916 5294 3.334881 ACAGAAATCCCATCCTTCCACTT 59.665 43.478 0.00 0.00 0.00 3.16
2917 5295 3.950395 CAGAAATCCCATCCTTCCACTTC 59.050 47.826 0.00 0.00 0.00 3.01
2918 5296 3.854994 AGAAATCCCATCCTTCCACTTCT 59.145 43.478 0.00 0.00 0.00 2.85
2919 5297 3.941704 AATCCCATCCTTCCACTTCTC 57.058 47.619 0.00 0.00 0.00 2.87
2920 5298 1.584724 TCCCATCCTTCCACTTCTCC 58.415 55.000 0.00 0.00 0.00 3.71
2921 5299 0.179000 CCCATCCTTCCACTTCTCCG 59.821 60.000 0.00 0.00 0.00 4.63
2922 5300 0.462759 CCATCCTTCCACTTCTCCGC 60.463 60.000 0.00 0.00 0.00 5.54
2923 5301 0.807667 CATCCTTCCACTTCTCCGCG 60.808 60.000 0.00 0.00 0.00 6.46
2924 5302 0.970937 ATCCTTCCACTTCTCCGCGA 60.971 55.000 8.23 0.00 0.00 5.87
2925 5303 1.153745 CCTTCCACTTCTCCGCGAG 60.154 63.158 8.23 3.02 0.00 5.03
2926 5304 1.587054 CTTCCACTTCTCCGCGAGT 59.413 57.895 8.23 0.00 0.00 4.18
2927 5305 0.734253 CTTCCACTTCTCCGCGAGTG 60.734 60.000 16.37 16.37 0.00 3.51
2928 5306 1.461091 TTCCACTTCTCCGCGAGTGT 61.461 55.000 20.19 11.02 0.00 3.55
2929 5307 1.444553 CCACTTCTCCGCGAGTGTC 60.445 63.158 20.19 0.00 0.00 3.67
2930 5308 1.581954 CACTTCTCCGCGAGTGTCT 59.418 57.895 8.23 0.00 0.00 3.41
2931 5309 0.455295 CACTTCTCCGCGAGTGTCTC 60.455 60.000 8.23 0.00 0.00 3.36
2932 5310 0.606944 ACTTCTCCGCGAGTGTCTCT 60.607 55.000 8.23 0.00 0.00 3.10
2933 5311 0.179176 CTTCTCCGCGAGTGTCTCTG 60.179 60.000 8.23 0.00 0.00 3.35
2934 5312 2.201436 TTCTCCGCGAGTGTCTCTGC 62.201 60.000 8.23 0.00 0.00 4.26
2935 5313 3.691744 CTCCGCGAGTGTCTCTGCC 62.692 68.421 8.23 0.00 30.64 4.85
2936 5314 4.803426 CCGCGAGTGTCTCTGCCC 62.803 72.222 8.23 0.00 30.64 5.36
2937 5315 3.753434 CGCGAGTGTCTCTGCCCT 61.753 66.667 0.00 0.00 30.64 5.19
2938 5316 2.183046 GCGAGTGTCTCTGCCCTC 59.817 66.667 0.00 0.00 0.00 4.30
2939 5317 2.487428 CGAGTGTCTCTGCCCTCG 59.513 66.667 0.00 0.00 40.54 4.63
2940 5318 2.888863 GAGTGTCTCTGCCCTCGG 59.111 66.667 0.00 0.00 0.00 4.63
2990 5368 4.722700 CAGCACCCCGTCCCCTTG 62.723 72.222 0.00 0.00 0.00 3.61
2998 5376 4.308458 CGTCCCCTTGCGTCACCA 62.308 66.667 0.00 0.00 0.00 4.17
2999 5377 2.668550 GTCCCCTTGCGTCACCAC 60.669 66.667 0.00 0.00 0.00 4.16
3000 5378 2.847234 TCCCCTTGCGTCACCACT 60.847 61.111 0.00 0.00 0.00 4.00
3001 5379 2.113139 CCCCTTGCGTCACCACTT 59.887 61.111 0.00 0.00 0.00 3.16
3002 5380 2.260869 CCCCTTGCGTCACCACTTG 61.261 63.158 0.00 0.00 0.00 3.16
3003 5381 1.525995 CCCTTGCGTCACCACTTGT 60.526 57.895 0.00 0.00 0.00 3.16
3004 5382 1.507141 CCCTTGCGTCACCACTTGTC 61.507 60.000 0.00 0.00 0.00 3.18
3005 5383 1.564622 CTTGCGTCACCACTTGTCG 59.435 57.895 0.00 0.00 39.44 4.35
3008 5386 3.234390 CGTCACCACTTGTCGCAG 58.766 61.111 0.00 0.00 30.04 5.18
3009 5387 2.939022 GTCACCACTTGTCGCAGC 59.061 61.111 0.00 0.00 0.00 5.25
3010 5388 1.887242 GTCACCACTTGTCGCAGCA 60.887 57.895 0.00 0.00 0.00 4.41
3011 5389 1.887242 TCACCACTTGTCGCAGCAC 60.887 57.895 0.00 0.00 0.00 4.40
3012 5390 2.591715 ACCACTTGTCGCAGCACC 60.592 61.111 0.00 0.00 0.00 5.01
3013 5391 2.591429 CCACTTGTCGCAGCACCA 60.591 61.111 0.00 0.00 0.00 4.17
3014 5392 2.610694 CCACTTGTCGCAGCACCAG 61.611 63.158 0.00 0.00 0.00 4.00
3015 5393 2.974698 ACTTGTCGCAGCACCAGC 60.975 61.111 0.00 0.00 42.56 4.85
3026 5404 4.814294 CACCAGCGTCGTAGCCCC 62.814 72.222 0.00 0.00 38.01 5.80
3028 5406 4.514577 CCAGCGTCGTAGCCCCTG 62.515 72.222 0.00 0.00 38.01 4.45
3032 5410 4.814294 CGTCGTAGCCCCTGCCAC 62.814 72.222 0.00 0.00 38.69 5.01
3033 5411 4.468689 GTCGTAGCCCCTGCCACC 62.469 72.222 0.00 0.00 38.69 4.61
3043 5421 4.007644 CTGCCACCCGTCTGCTGA 62.008 66.667 0.00 0.00 0.00 4.26
3044 5422 3.535629 CTGCCACCCGTCTGCTGAA 62.536 63.158 0.00 0.00 0.00 3.02
3045 5423 2.743928 GCCACCCGTCTGCTGAAG 60.744 66.667 0.00 0.00 0.00 3.02
3046 5424 2.743928 CCACCCGTCTGCTGAAGC 60.744 66.667 0.00 0.00 42.50 3.86
3047 5425 2.345244 CACCCGTCTGCTGAAGCT 59.655 61.111 3.61 0.00 42.66 3.74
3048 5426 1.739562 CACCCGTCTGCTGAAGCTC 60.740 63.158 3.61 0.00 42.66 4.09
3049 5427 2.507992 CCCGTCTGCTGAAGCTCG 60.508 66.667 3.61 6.10 42.66 5.03
3050 5428 3.184683 CCGTCTGCTGAAGCTCGC 61.185 66.667 3.61 0.00 42.66 5.03
3051 5429 3.540014 CGTCTGCTGAAGCTCGCG 61.540 66.667 0.00 0.00 42.66 5.87
3052 5430 2.431601 GTCTGCTGAAGCTCGCGT 60.432 61.111 5.77 0.00 42.66 6.01
3053 5431 2.024319 GTCTGCTGAAGCTCGCGTT 61.024 57.895 5.77 0.00 42.66 4.84
3054 5432 1.734477 TCTGCTGAAGCTCGCGTTC 60.734 57.895 5.77 3.11 42.66 3.95
3055 5433 3.064248 CTGCTGAAGCTCGCGTTCG 62.064 63.158 5.77 1.06 42.66 3.95
3056 5434 4.491328 GCTGAAGCTCGCGTTCGC 62.491 66.667 5.77 7.89 38.21 4.70
3057 5435 3.843240 CTGAAGCTCGCGTTCGCC 61.843 66.667 5.77 0.00 35.26 5.54
3083 5461 4.485834 CGTCCGGCGGTTCATCGA 62.486 66.667 27.32 0.36 36.85 3.59
3084 5462 2.884207 GTCCGGCGGTTCATCGAC 60.884 66.667 27.32 11.11 34.28 4.20
3085 5463 4.137872 TCCGGCGGTTCATCGACC 62.138 66.667 27.32 0.00 34.05 4.79
3086 5464 4.444838 CCGGCGGTTCATCGACCA 62.445 66.667 19.97 0.00 39.78 4.02
3087 5465 2.885644 CGGCGGTTCATCGACCAG 60.886 66.667 0.00 0.00 39.78 4.00
3088 5466 3.195698 GGCGGTTCATCGACCAGC 61.196 66.667 0.00 0.00 39.78 4.85
3089 5467 3.195698 GCGGTTCATCGACCAGCC 61.196 66.667 0.00 0.00 39.78 4.85
3090 5468 2.511600 CGGTTCATCGACCAGCCC 60.512 66.667 0.00 0.00 39.78 5.19
3091 5469 2.124695 GGTTCATCGACCAGCCCC 60.125 66.667 0.00 0.00 39.57 5.80
3092 5470 2.511600 GTTCATCGACCAGCCCCG 60.512 66.667 0.00 0.00 0.00 5.73
3093 5471 2.682136 TTCATCGACCAGCCCCGA 60.682 61.111 0.00 0.00 39.25 5.14
3094 5472 2.063979 TTCATCGACCAGCCCCGAT 61.064 57.895 0.00 0.00 45.17 4.18
3095 5473 1.622607 TTCATCGACCAGCCCCGATT 61.623 55.000 0.00 0.00 42.79 3.34
3096 5474 1.889105 CATCGACCAGCCCCGATTG 60.889 63.158 0.00 0.00 42.79 2.67
3097 5475 2.367202 ATCGACCAGCCCCGATTGT 61.367 57.895 0.00 0.00 42.10 2.71
3098 5476 1.046472 ATCGACCAGCCCCGATTGTA 61.046 55.000 0.00 0.00 42.10 2.41
3099 5477 1.227263 CGACCAGCCCCGATTGTAG 60.227 63.158 0.00 0.00 0.00 2.74
3100 5478 1.523938 GACCAGCCCCGATTGTAGC 60.524 63.158 0.00 0.00 0.00 3.58
3101 5479 2.252072 GACCAGCCCCGATTGTAGCA 62.252 60.000 0.00 0.00 0.00 3.49
3102 5480 1.077787 CCAGCCCCGATTGTAGCAA 60.078 57.895 0.00 0.00 0.00 3.91
3103 5481 0.466189 CCAGCCCCGATTGTAGCAAT 60.466 55.000 0.00 0.00 0.00 3.56
3104 5482 1.392589 CAGCCCCGATTGTAGCAATT 58.607 50.000 0.00 0.00 0.00 2.32
3105 5483 2.571212 CAGCCCCGATTGTAGCAATTA 58.429 47.619 0.00 0.00 0.00 1.40
3106 5484 2.290641 CAGCCCCGATTGTAGCAATTAC 59.709 50.000 0.00 0.00 0.00 1.89
3107 5485 1.607148 GCCCCGATTGTAGCAATTACC 59.393 52.381 0.00 0.00 0.00 2.85
3108 5486 2.925724 CCCCGATTGTAGCAATTACCA 58.074 47.619 0.00 0.00 0.00 3.25
3109 5487 3.486383 CCCCGATTGTAGCAATTACCAT 58.514 45.455 0.00 0.00 0.00 3.55
3110 5488 3.253188 CCCCGATTGTAGCAATTACCATG 59.747 47.826 0.00 0.00 0.00 3.66
3111 5489 3.304659 CCCGATTGTAGCAATTACCATGC 60.305 47.826 0.00 0.00 44.15 4.06
3112 5490 3.304659 CCGATTGTAGCAATTACCATGCC 60.305 47.826 0.00 0.00 44.91 4.40
3113 5491 3.606846 CGATTGTAGCAATTACCATGCCG 60.607 47.826 0.00 0.00 44.91 5.69
3114 5492 1.674359 TGTAGCAATTACCATGCCGG 58.326 50.000 0.00 0.00 44.91 6.13
3123 5501 2.676121 CCATGCCGGTTCCAGCAA 60.676 61.111 1.90 0.00 43.36 3.91
3124 5502 2.274645 CCATGCCGGTTCCAGCAAA 61.275 57.895 1.90 0.00 43.36 3.68
3125 5503 1.664873 CATGCCGGTTCCAGCAAAA 59.335 52.632 1.90 0.00 43.36 2.44
3126 5504 0.033228 CATGCCGGTTCCAGCAAAAA 59.967 50.000 1.90 0.00 43.36 1.94
3156 5534 4.722700 GTGCAGGGGTCACCGCAT 62.723 66.667 14.41 0.00 45.56 4.73
3213 5591 0.988145 TGCTTGTAGGCCCAGGCTAT 60.988 55.000 15.36 0.32 42.43 2.97
3219 5597 4.098914 TGTAGGCCCAGGCTATTAATTG 57.901 45.455 8.89 0.00 42.43 2.32
3271 5649 1.439679 GTTTCGGACGCTCCATTCTT 58.560 50.000 5.15 0.00 35.91 2.52
3281 5659 5.335976 GGACGCTCCATTCTTTCTTCAATTT 60.336 40.000 0.00 0.00 36.28 1.82
3293 5671 7.930217 TCTTTCTTCAATTTCACGATGAACTT 58.070 30.769 0.00 0.00 35.89 2.66
3300 5678 1.445410 CACGATGAACTTCGCCGGA 60.445 57.895 5.05 0.00 42.82 5.14
3315 5693 0.884259 CCGGATTCACACAGCACACA 60.884 55.000 0.00 0.00 0.00 3.72
3359 5737 4.289672 ACCTTCCTTAACATGTCATCACCT 59.710 41.667 0.00 0.00 0.00 4.00
3368 5746 4.074970 ACATGTCATCACCTCAACCTTTC 58.925 43.478 0.00 0.00 0.00 2.62
3370 5748 3.743521 TGTCATCACCTCAACCTTTCAG 58.256 45.455 0.00 0.00 0.00 3.02
3378 5756 5.820947 TCACCTCAACCTTTCAGACTAAAAC 59.179 40.000 0.00 0.00 0.00 2.43
3384 5762 5.924475 ACCTTTCAGACTAAAACGTGATG 57.076 39.130 0.00 0.00 0.00 3.07
3497 6833 9.877178 AATGAGATCTATAACGTTGTTTTCTCT 57.123 29.630 11.99 5.98 0.00 3.10
3498 6834 9.877178 ATGAGATCTATAACGTTGTTTTCTCTT 57.123 29.630 11.99 11.22 0.00 2.85
3499 6835 9.355215 TGAGATCTATAACGTTGTTTTCTCTTC 57.645 33.333 11.99 0.00 0.00 2.87
3500 6836 9.355215 GAGATCTATAACGTTGTTTTCTCTTCA 57.645 33.333 11.99 0.00 0.00 3.02
3501 6837 9.877178 AGATCTATAACGTTGTTTTCTCTTCAT 57.123 29.630 11.99 0.00 0.00 2.57
3502 6838 9.907576 GATCTATAACGTTGTTTTCTCTTCATG 57.092 33.333 11.99 0.00 0.00 3.07
3503 6839 7.739295 TCTATAACGTTGTTTTCTCTTCATGC 58.261 34.615 11.99 0.00 0.00 4.06
3518 6854 3.958147 ATGCTCGTGCCCAACTCCG 62.958 63.158 7.05 0.00 38.71 4.63
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 9.905713 TCATGTTTATCTTTGTAGGAGCTTATT 57.094 29.630 0.00 0.00 0.00 1.40
4 5 9.905713 TTCATGTTTATCTTTGTAGGAGCTTAT 57.094 29.630 0.00 0.00 0.00 1.73
5 6 9.733556 TTTCATGTTTATCTTTGTAGGAGCTTA 57.266 29.630 0.00 0.00 0.00 3.09
6 7 8.635765 TTTCATGTTTATCTTTGTAGGAGCTT 57.364 30.769 0.00 0.00 0.00 3.74
7 8 8.103305 TCTTTCATGTTTATCTTTGTAGGAGCT 58.897 33.333 0.00 0.00 0.00 4.09
8 9 8.268850 TCTTTCATGTTTATCTTTGTAGGAGC 57.731 34.615 0.00 0.00 0.00 4.70
14 15 9.965824 ATCGTTTTCTTTCATGTTTATCTTTGT 57.034 25.926 0.00 0.00 0.00 2.83
31 32 9.796120 TCTCAAACATTTGTTTTATCGTTTTCT 57.204 25.926 5.95 0.00 45.07 2.52
32 33 9.829637 GTCTCAAACATTTGTTTTATCGTTTTC 57.170 29.630 5.95 0.00 45.07 2.29
33 34 9.581099 AGTCTCAAACATTTGTTTTATCGTTTT 57.419 25.926 5.95 0.00 45.07 2.43
34 35 9.019764 CAGTCTCAAACATTTGTTTTATCGTTT 57.980 29.630 5.95 0.00 45.07 3.60
35 36 8.402472 TCAGTCTCAAACATTTGTTTTATCGTT 58.598 29.630 5.95 0.00 45.07 3.85
36 37 7.855904 GTCAGTCTCAAACATTTGTTTTATCGT 59.144 33.333 5.95 0.00 45.07 3.73
37 38 8.070171 AGTCAGTCTCAAACATTTGTTTTATCG 58.930 33.333 5.95 0.00 45.07 2.92
64 65 8.709308 GGCCTCATGACTCTTATTGGTATATAT 58.291 37.037 0.00 0.00 0.00 0.86
65 66 7.901322 AGGCCTCATGACTCTTATTGGTATATA 59.099 37.037 0.00 0.00 0.00 0.86
66 67 6.732862 AGGCCTCATGACTCTTATTGGTATAT 59.267 38.462 0.00 0.00 0.00 0.86
67 68 6.084738 AGGCCTCATGACTCTTATTGGTATA 58.915 40.000 0.00 0.00 0.00 1.47
68 69 4.910304 AGGCCTCATGACTCTTATTGGTAT 59.090 41.667 0.00 0.00 0.00 2.73
69 70 4.298626 AGGCCTCATGACTCTTATTGGTA 58.701 43.478 0.00 0.00 0.00 3.25
70 71 3.118531 AGGCCTCATGACTCTTATTGGT 58.881 45.455 0.00 0.00 0.00 3.67
71 72 3.853355 AGGCCTCATGACTCTTATTGG 57.147 47.619 0.00 0.00 0.00 3.16
72 73 4.802248 GCCTAGGCCTCATGACTCTTATTG 60.802 50.000 24.19 0.00 34.56 1.90
73 74 3.326297 GCCTAGGCCTCATGACTCTTATT 59.674 47.826 24.19 0.00 34.56 1.40
74 75 2.903135 GCCTAGGCCTCATGACTCTTAT 59.097 50.000 24.19 0.00 34.56 1.73
75 76 2.091055 AGCCTAGGCCTCATGACTCTTA 60.091 50.000 30.42 0.00 43.17 2.10
76 77 1.127343 GCCTAGGCCTCATGACTCTT 58.873 55.000 24.19 0.00 34.56 2.85
77 78 0.264359 AGCCTAGGCCTCATGACTCT 59.736 55.000 30.42 4.39 43.17 3.24
78 79 1.892474 CTAGCCTAGGCCTCATGACTC 59.108 57.143 30.42 0.00 43.17 3.36
79 80 1.219213 ACTAGCCTAGGCCTCATGACT 59.781 52.381 30.42 11.64 43.17 3.41
80 81 1.710816 ACTAGCCTAGGCCTCATGAC 58.289 55.000 30.42 0.00 43.17 3.06
81 82 2.435805 CAAACTAGCCTAGGCCTCATGA 59.564 50.000 30.42 7.93 43.17 3.07
82 83 2.486191 CCAAACTAGCCTAGGCCTCATG 60.486 54.545 30.42 20.83 43.17 3.07
83 84 1.771255 CCAAACTAGCCTAGGCCTCAT 59.229 52.381 30.42 14.41 43.17 2.90
84 85 1.204146 CCAAACTAGCCTAGGCCTCA 58.796 55.000 30.42 14.73 43.17 3.86
85 86 0.179043 GCCAAACTAGCCTAGGCCTC 60.179 60.000 30.42 3.09 43.17 4.70
86 87 0.914417 TGCCAAACTAGCCTAGGCCT 60.914 55.000 30.42 19.10 44.60 5.19
87 88 0.464554 CTGCCAAACTAGCCTAGGCC 60.465 60.000 30.42 12.61 44.60 5.19
88 89 1.098129 GCTGCCAAACTAGCCTAGGC 61.098 60.000 27.19 27.19 45.41 3.93
89 90 0.253044 TGCTGCCAAACTAGCCTAGG 59.747 55.000 3.67 3.67 39.15 3.02
90 91 2.113860 TTGCTGCCAAACTAGCCTAG 57.886 50.000 0.00 0.00 39.15 3.02
91 92 2.224769 ACTTTGCTGCCAAACTAGCCTA 60.225 45.455 0.00 0.00 39.15 3.93
92 93 1.251251 CTTTGCTGCCAAACTAGCCT 58.749 50.000 0.00 0.00 39.15 4.58
125 127 3.163616 ACCGTGGTTTCCAATTACCAT 57.836 42.857 1.23 0.00 45.53 3.55
197 199 7.429633 CACCATCTAAACACATGTAAAACCAA 58.570 34.615 0.00 0.00 0.00 3.67
199 201 5.861787 GCACCATCTAAACACATGTAAAACC 59.138 40.000 0.00 0.00 0.00 3.27
215 218 9.643693 CAAAACTTTGATAAAATAGCACCATCT 57.356 29.630 0.00 0.00 40.55 2.90
289 311 4.024143 GCGAACGTGTGCATGGCA 62.024 61.111 7.35 0.00 35.60 4.92
394 448 6.050432 TCAGTTAGATTTGTTTACCACGTGT 58.950 36.000 15.65 5.35 0.00 4.49
426 485 9.077674 GCTAAACGACATGTATTATATCTCCTG 57.922 37.037 0.00 0.00 0.00 3.86
579 651 6.836527 TGGTCTTTTTGGAGTATCTGGAAAAA 59.163 34.615 0.00 0.00 33.73 1.94
724 801 3.000041 CTGTTATGTCGGCAGCAAAGTA 59.000 45.455 0.00 0.00 0.00 2.24
725 802 1.806542 CTGTTATGTCGGCAGCAAAGT 59.193 47.619 0.00 0.00 0.00 2.66
828 930 1.056750 CGATCGGTCGTGCGAAAAC 59.943 57.895 10.62 0.00 42.78 2.43
882 995 1.825474 CTCCAGTGTATATAGCCCCGG 59.175 57.143 0.00 0.00 0.00 5.73
883 996 1.204941 GCTCCAGTGTATATAGCCCCG 59.795 57.143 0.00 0.00 0.00 5.73
884 997 1.555533 GGCTCCAGTGTATATAGCCCC 59.444 57.143 0.00 0.00 45.69 5.80
913 1027 0.911856 CGCGTACGTGTTCATCGATT 59.088 50.000 20.36 0.00 33.53 3.34
938 1052 3.774766 TCAGGATTGCTTTGTCTAGCCTA 59.225 43.478 0.00 0.00 40.49 3.93
939 1053 2.573462 TCAGGATTGCTTTGTCTAGCCT 59.427 45.455 0.00 0.00 40.49 4.58
1062 1176 1.450312 GCCAGACGGAATCACCTGG 60.450 63.158 0.00 0.00 46.67 4.45
1136 1250 1.454663 GGGCAGAGGGATTGAAGGC 60.455 63.158 0.00 0.00 0.00 4.35
1168 1282 3.912907 CGTAGGCCGCCGGATCTT 61.913 66.667 7.68 0.00 0.00 2.40
1230 1344 1.557099 TCGGCTCAGCTAAGAGGAAA 58.443 50.000 0.00 0.00 36.15 3.13
1231 1345 1.557099 TTCGGCTCAGCTAAGAGGAA 58.443 50.000 0.00 0.00 36.15 3.36
1232 1346 1.557099 TTTCGGCTCAGCTAAGAGGA 58.443 50.000 0.00 0.00 36.15 3.71
1233 1347 2.093973 TCTTTTCGGCTCAGCTAAGAGG 60.094 50.000 0.00 0.00 36.15 3.69
1248 1364 6.787085 TCCAAGATTTCTCGAACTCTTTTC 57.213 37.500 8.88 0.00 37.96 2.29
1251 1368 6.293004 AGATCCAAGATTTCTCGAACTCTT 57.707 37.500 6.48 6.48 39.78 2.85
1296 1413 5.506317 CCGACTGCACAATTCTTCTTCTTTT 60.506 40.000 0.00 0.00 0.00 2.27
1297 1414 4.023707 CCGACTGCACAATTCTTCTTCTTT 60.024 41.667 0.00 0.00 0.00 2.52
1303 1420 3.683581 GCCGACTGCACAATTCTTC 57.316 52.632 0.00 0.00 40.77 2.87
1340 1457 4.513198 AAACAATCCCCATACAAACACG 57.487 40.909 0.00 0.00 0.00 4.49
1382 1499 8.798153 CGATAGGATTGTTGAAAATTTTACTGC 58.202 33.333 2.75 0.00 0.00 4.40
1413 1535 1.679139 CTCCTGTTGGACTGTTTGCA 58.321 50.000 0.00 0.00 37.46 4.08
1464 1727 4.686554 GTGGAGGAGCGTATTGACAATATC 59.313 45.833 10.99 5.18 0.00 1.63
1478 1741 0.321919 TGAGTGCATTGTGGAGGAGC 60.322 55.000 0.00 0.00 0.00 4.70
1484 1747 3.181488 TGAACTTGTTGAGTGCATTGTGG 60.181 43.478 0.00 0.00 39.09 4.17
1511 1774 4.422073 TTGGAAACAGAGAGAAGCAGAA 57.578 40.909 0.00 0.00 44.54 3.02
1521 1784 1.801178 GCCGAGTCTTTGGAAACAGAG 59.199 52.381 0.00 0.00 44.54 3.35
1522 1785 1.140052 TGCCGAGTCTTTGGAAACAGA 59.860 47.619 0.00 0.00 44.54 3.41
1524 1787 2.270352 ATGCCGAGTCTTTGGAAACA 57.730 45.000 0.00 0.00 39.83 2.83
1525 1788 3.424433 CGTAATGCCGAGTCTTTGGAAAC 60.424 47.826 0.00 0.00 0.00 2.78
1528 1791 1.274167 ACGTAATGCCGAGTCTTTGGA 59.726 47.619 0.00 0.00 0.00 3.53
1529 1792 1.722011 ACGTAATGCCGAGTCTTTGG 58.278 50.000 0.00 0.00 0.00 3.28
1530 1793 2.724839 GCAACGTAATGCCGAGTCTTTG 60.725 50.000 0.54 0.00 40.49 2.77
1531 1794 1.463444 GCAACGTAATGCCGAGTCTTT 59.537 47.619 0.54 0.00 40.49 2.52
1532 1795 1.076332 GCAACGTAATGCCGAGTCTT 58.924 50.000 0.54 0.00 40.49 3.01
1541 1804 2.031245 TGTGGAAGCAAGCAACGTAATG 60.031 45.455 0.00 0.00 0.00 1.90
1543 1806 1.332375 GTGTGGAAGCAAGCAACGTAA 59.668 47.619 0.00 0.00 0.00 3.18
1544 1807 0.941542 GTGTGGAAGCAAGCAACGTA 59.058 50.000 0.00 0.00 0.00 3.57
1545 1808 1.029408 TGTGTGGAAGCAAGCAACGT 61.029 50.000 0.00 0.00 0.00 3.99
1555 2283 0.232303 GCGTCGAACTTGTGTGGAAG 59.768 55.000 0.00 0.00 0.00 3.46
1556 2284 0.460459 TGCGTCGAACTTGTGTGGAA 60.460 50.000 0.00 0.00 0.00 3.53
1557 2285 0.460459 TTGCGTCGAACTTGTGTGGA 60.460 50.000 0.00 0.00 0.00 4.02
1558 2286 0.315869 GTTGCGTCGAACTTGTGTGG 60.316 55.000 0.00 0.00 0.00 4.17
1559 2287 0.315869 GGTTGCGTCGAACTTGTGTG 60.316 55.000 0.00 0.00 0.00 3.82
1560 2288 0.741574 TGGTTGCGTCGAACTTGTGT 60.742 50.000 0.00 0.00 0.00 3.72
1562 2290 1.157870 CCTGGTTGCGTCGAACTTGT 61.158 55.000 0.00 0.00 0.00 3.16
1563 2291 1.569493 CCTGGTTGCGTCGAACTTG 59.431 57.895 0.00 0.00 0.00 3.16
1571 3766 0.385390 CAAGAAAAGCCTGGTTGCGT 59.615 50.000 0.00 0.00 36.02 5.24
1583 3778 5.011635 GGTGGATAAGGAAAAGCCAAGAAAA 59.988 40.000 0.00 0.00 40.02 2.29
1584 3779 4.526650 GGTGGATAAGGAAAAGCCAAGAAA 59.473 41.667 0.00 0.00 40.02 2.52
1585 3780 4.086457 GGTGGATAAGGAAAAGCCAAGAA 58.914 43.478 0.00 0.00 40.02 2.52
1586 3781 3.697166 GGTGGATAAGGAAAAGCCAAGA 58.303 45.455 0.00 0.00 40.02 3.02
1624 3819 2.113774 CAGGTGCCCAGACAGCAA 59.886 61.111 0.00 0.00 43.02 3.91
1626 3821 2.046507 CTCAGGTGCCCAGACAGC 60.047 66.667 0.00 0.00 38.33 4.40
1664 3859 1.519455 GCACTGTGTAGCCGCTAGG 60.519 63.158 9.86 0.00 41.62 3.02
1747 3943 2.900528 CGAGTACGGGATGGATTGC 58.099 57.895 0.00 0.00 35.72 3.56
1765 3961 1.066587 CTTCAGTCCTCGGATCGCC 59.933 63.158 0.00 0.00 0.00 5.54
1772 3968 3.502595 TCAAGTACAGACTTCAGTCCTCG 59.497 47.826 3.20 0.00 44.39 4.63
1780 3976 4.023963 GGTTGGCTTTCAAGTACAGACTTC 60.024 45.833 0.00 0.00 44.39 3.01
1787 3983 2.360801 TGCTTGGTTGGCTTTCAAGTAC 59.639 45.455 12.87 0.00 39.80 2.73
1792 3988 1.999648 ATCTGCTTGGTTGGCTTTCA 58.000 45.000 0.00 0.00 0.00 2.69
1812 4075 2.146342 CATTGACACTGCTCGAGGTTT 58.854 47.619 15.58 0.00 0.00 3.27
1834 4097 1.416401 GCAATCATAGACGGAGGGGAA 59.584 52.381 0.00 0.00 0.00 3.97
1843 4111 4.194640 TGAGGCTTTCAGCAATCATAGAC 58.805 43.478 0.00 0.00 44.75 2.59
1914 4183 0.694771 AGCCCATCATCACAGTGTGT 59.305 50.000 22.29 7.76 34.79 3.72
2110 4381 1.137086 GCGAGCTGATTAACCTGGAGA 59.863 52.381 0.00 0.00 0.00 3.71
2224 4495 9.826574 AACCGAGCAATTATCTAGTATAAACAA 57.173 29.630 0.00 0.00 0.00 2.83
2560 4931 8.059798 AGCCAAGACGTCTTAGTACTATTTTA 57.940 34.615 29.28 0.00 34.28 1.52
2595 4971 7.596749 ACAACGGAAACAATCTAATGACTAG 57.403 36.000 0.00 0.00 0.00 2.57
2600 4976 5.920273 AGCAAACAACGGAAACAATCTAATG 59.080 36.000 0.00 0.00 0.00 1.90
2623 4999 5.295292 TCGGTCGAGAACAAGTACCTTATAG 59.705 44.000 0.00 0.00 0.00 1.31
2629 5005 2.712057 TTCGGTCGAGAACAAGTACC 57.288 50.000 0.00 0.00 0.00 3.34
2652 5030 2.128771 TTTCAGCATCTAACCCAGGC 57.871 50.000 0.00 0.00 0.00 4.85
2666 5044 9.125906 CAGAACTAGAATTGCAGAATTTTTCAG 57.874 33.333 0.00 0.00 31.58 3.02
2671 5049 9.822185 AAAAACAGAACTAGAATTGCAGAATTT 57.178 25.926 0.00 0.00 31.58 1.82
2736 5114 8.953990 CGTTCCACAAATTTACAACTTAAGAAG 58.046 33.333 10.09 3.43 0.00 2.85
2737 5115 7.432838 GCGTTCCACAAATTTACAACTTAAGAA 59.567 33.333 10.09 0.00 0.00 2.52
2738 5116 6.913673 GCGTTCCACAAATTTACAACTTAAGA 59.086 34.615 10.09 0.00 0.00 2.10
2739 5117 6.129561 CGCGTTCCACAAATTTACAACTTAAG 60.130 38.462 0.00 0.00 0.00 1.85
2740 5118 5.681982 CGCGTTCCACAAATTTACAACTTAA 59.318 36.000 0.00 0.00 0.00 1.85
2741 5119 5.206299 CGCGTTCCACAAATTTACAACTTA 58.794 37.500 0.00 0.00 0.00 2.24
2742 5120 4.039032 CGCGTTCCACAAATTTACAACTT 58.961 39.130 0.00 0.00 0.00 2.66
2743 5121 3.065648 ACGCGTTCCACAAATTTACAACT 59.934 39.130 5.58 0.00 0.00 3.16
2744 5122 3.178814 CACGCGTTCCACAAATTTACAAC 59.821 43.478 10.22 0.00 0.00 3.32
2745 5123 3.181499 ACACGCGTTCCACAAATTTACAA 60.181 39.130 10.22 0.00 0.00 2.41
2746 5124 2.355132 ACACGCGTTCCACAAATTTACA 59.645 40.909 10.22 0.00 0.00 2.41
2747 5125 2.717011 CACACGCGTTCCACAAATTTAC 59.283 45.455 10.22 0.00 0.00 2.01
2748 5126 2.855187 GCACACGCGTTCCACAAATTTA 60.855 45.455 10.22 0.00 0.00 1.40
2749 5127 1.833860 CACACGCGTTCCACAAATTT 58.166 45.000 10.22 0.00 0.00 1.82
2750 5128 0.593773 GCACACGCGTTCCACAAATT 60.594 50.000 10.22 0.00 0.00 1.82
2751 5129 1.008995 GCACACGCGTTCCACAAAT 60.009 52.632 10.22 0.00 0.00 2.32
2752 5130 2.405594 GCACACGCGTTCCACAAA 59.594 55.556 10.22 0.00 0.00 2.83
2753 5131 3.578272 GGCACACGCGTTCCACAA 61.578 61.111 10.22 0.00 39.92 3.33
2754 5132 4.840005 TGGCACACGCGTTCCACA 62.840 61.111 10.22 3.87 33.07 4.17
2755 5133 4.012895 CTGGCACACGCGTTCCAC 62.013 66.667 10.22 0.65 33.07 4.02
2789 5167 2.967615 GACCGGCCTAGCGATTGC 60.968 66.667 0.00 0.00 43.24 3.56
2790 5168 2.658593 CGACCGGCCTAGCGATTG 60.659 66.667 0.00 0.00 0.00 2.67
2791 5169 4.587189 GCGACCGGCCTAGCGATT 62.587 66.667 0.00 0.00 34.80 3.34
2803 5181 2.739671 AACGGTTAAGCGGCGACC 60.740 61.111 28.51 8.48 0.00 4.79
2804 5182 2.472934 CAACGGTTAAGCGGCGAC 59.527 61.111 28.51 1.23 0.00 5.19
2805 5183 2.510064 ATCCAACGGTTAAGCGGCGA 62.510 55.000 28.51 20.08 0.00 5.54
2806 5184 1.641123 AATCCAACGGTTAAGCGGCG 61.641 55.000 28.51 18.83 0.00 6.46
2807 5185 1.371595 TAATCCAACGGTTAAGCGGC 58.628 50.000 28.51 0.00 0.00 6.53
2808 5186 3.668596 CTTAATCCAACGGTTAAGCGG 57.331 47.619 28.51 13.27 32.91 5.52
2811 5189 4.094442 GTCTGGCTTAATCCAACGGTTAAG 59.906 45.833 0.00 0.00 39.66 1.85
2812 5190 4.004982 GTCTGGCTTAATCCAACGGTTAA 58.995 43.478 0.00 0.00 35.36 2.01
2813 5191 3.262405 AGTCTGGCTTAATCCAACGGTTA 59.738 43.478 0.00 0.00 35.36 2.85
2814 5192 2.039879 AGTCTGGCTTAATCCAACGGTT 59.960 45.455 0.00 0.00 35.36 4.44
2815 5193 1.628846 AGTCTGGCTTAATCCAACGGT 59.371 47.619 0.00 0.00 35.36 4.83
2816 5194 2.009774 CAGTCTGGCTTAATCCAACGG 58.990 52.381 0.00 0.00 35.36 4.44
2817 5195 1.398390 GCAGTCTGGCTTAATCCAACG 59.602 52.381 1.14 0.00 35.36 4.10
2818 5196 1.398390 CGCAGTCTGGCTTAATCCAAC 59.602 52.381 1.14 1.84 35.36 3.77
2819 5197 1.737838 CGCAGTCTGGCTTAATCCAA 58.262 50.000 1.14 0.00 35.36 3.53
2820 5198 0.744414 GCGCAGTCTGGCTTAATCCA 60.744 55.000 0.30 0.00 34.42 3.41
2821 5199 1.440145 GGCGCAGTCTGGCTTAATCC 61.440 60.000 10.83 0.00 0.00 3.01
2822 5200 1.766143 CGGCGCAGTCTGGCTTAATC 61.766 60.000 10.83 0.00 0.00 1.75
2823 5201 1.815421 CGGCGCAGTCTGGCTTAAT 60.815 57.895 10.83 0.00 0.00 1.40
2824 5202 2.434185 CGGCGCAGTCTGGCTTAA 60.434 61.111 10.83 0.00 0.00 1.85
2825 5203 3.234630 AACGGCGCAGTCTGGCTTA 62.235 57.895 14.98 0.00 0.00 3.09
2826 5204 4.626081 AACGGCGCAGTCTGGCTT 62.626 61.111 14.98 0.00 0.00 4.35
2829 5207 3.958147 ATCCAACGGCGCAGTCTGG 62.958 63.158 24.61 24.61 0.00 3.86
2830 5208 2.434884 ATCCAACGGCGCAGTCTG 60.435 61.111 14.98 13.74 0.00 3.51
2831 5209 2.434884 CATCCAACGGCGCAGTCT 60.435 61.111 14.98 1.40 0.00 3.24
2832 5210 2.740714 GACATCCAACGGCGCAGTC 61.741 63.158 14.98 2.42 0.00 3.51
2833 5211 2.731691 AAGACATCCAACGGCGCAGT 62.732 55.000 10.83 9.16 0.00 4.40
2834 5212 1.577328 AAAGACATCCAACGGCGCAG 61.577 55.000 10.83 8.25 0.00 5.18
2835 5213 1.573829 GAAAGACATCCAACGGCGCA 61.574 55.000 10.83 0.00 0.00 6.09
2836 5214 1.134694 GAAAGACATCCAACGGCGC 59.865 57.895 6.90 0.00 0.00 6.53
2837 5215 0.673644 AGGAAAGACATCCAACGGCG 60.674 55.000 4.80 4.80 42.27 6.46
2838 5216 1.087501 GAGGAAAGACATCCAACGGC 58.912 55.000 0.00 0.00 42.27 5.68
2839 5217 2.770164 AGAGGAAAGACATCCAACGG 57.230 50.000 0.00 0.00 42.27 4.44
2840 5218 5.874810 TGATTTAGAGGAAAGACATCCAACG 59.125 40.000 0.00 0.00 42.27 4.10
2841 5219 7.772757 AGATGATTTAGAGGAAAGACATCCAAC 59.227 37.037 0.00 0.00 41.08 3.77
2842 5220 7.865820 AGATGATTTAGAGGAAAGACATCCAA 58.134 34.615 0.00 0.00 41.08 3.53
2843 5221 7.419518 GGAGATGATTTAGAGGAAAGACATCCA 60.420 40.741 0.00 0.00 41.08 3.41
2844 5222 6.934083 GGAGATGATTTAGAGGAAAGACATCC 59.066 42.308 0.00 0.00 41.08 3.51
2845 5223 7.734942 AGGAGATGATTTAGAGGAAAGACATC 58.265 38.462 0.00 0.00 40.81 3.06
2846 5224 7.688918 AGGAGATGATTTAGAGGAAAGACAT 57.311 36.000 0.00 0.00 33.54 3.06
2847 5225 7.365117 GGAAGGAGATGATTTAGAGGAAAGACA 60.365 40.741 0.00 0.00 0.00 3.41
2848 5226 6.989759 GGAAGGAGATGATTTAGAGGAAAGAC 59.010 42.308 0.00 0.00 0.00 3.01
2849 5227 6.905776 AGGAAGGAGATGATTTAGAGGAAAGA 59.094 38.462 0.00 0.00 0.00 2.52
2850 5228 7.071071 AGAGGAAGGAGATGATTTAGAGGAAAG 59.929 40.741 0.00 0.00 0.00 2.62
2851 5229 6.905776 AGAGGAAGGAGATGATTTAGAGGAAA 59.094 38.462 0.00 0.00 0.00 3.13
2852 5230 6.448202 AGAGGAAGGAGATGATTTAGAGGAA 58.552 40.000 0.00 0.00 0.00 3.36
2853 5231 6.036926 AGAGGAAGGAGATGATTTAGAGGA 57.963 41.667 0.00 0.00 0.00 3.71
2854 5232 5.048083 CGAGAGGAAGGAGATGATTTAGAGG 60.048 48.000 0.00 0.00 0.00 3.69
2855 5233 5.564651 GCGAGAGGAAGGAGATGATTTAGAG 60.565 48.000 0.00 0.00 0.00 2.43
2856 5234 4.279671 GCGAGAGGAAGGAGATGATTTAGA 59.720 45.833 0.00 0.00 0.00 2.10
2857 5235 4.280677 AGCGAGAGGAAGGAGATGATTTAG 59.719 45.833 0.00 0.00 0.00 1.85
2858 5236 4.219115 AGCGAGAGGAAGGAGATGATTTA 58.781 43.478 0.00 0.00 0.00 1.40
2859 5237 3.037549 AGCGAGAGGAAGGAGATGATTT 58.962 45.455 0.00 0.00 0.00 2.17
2860 5238 2.676748 AGCGAGAGGAAGGAGATGATT 58.323 47.619 0.00 0.00 0.00 2.57
2861 5239 2.380064 AGCGAGAGGAAGGAGATGAT 57.620 50.000 0.00 0.00 0.00 2.45
2862 5240 2.151502 AAGCGAGAGGAAGGAGATGA 57.848 50.000 0.00 0.00 0.00 2.92
2863 5241 2.977772 AAAGCGAGAGGAAGGAGATG 57.022 50.000 0.00 0.00 0.00 2.90
2864 5242 3.634910 GACTAAAGCGAGAGGAAGGAGAT 59.365 47.826 0.00 0.00 0.00 2.75
2865 5243 3.018149 GACTAAAGCGAGAGGAAGGAGA 58.982 50.000 0.00 0.00 0.00 3.71
2866 5244 2.755655 TGACTAAAGCGAGAGGAAGGAG 59.244 50.000 0.00 0.00 0.00 3.69
2867 5245 2.803956 TGACTAAAGCGAGAGGAAGGA 58.196 47.619 0.00 0.00 0.00 3.36
2868 5246 3.254892 GTTGACTAAAGCGAGAGGAAGG 58.745 50.000 0.00 0.00 0.00 3.46
2869 5247 2.917971 CGTTGACTAAAGCGAGAGGAAG 59.082 50.000 0.00 0.00 0.00 3.46
2870 5248 2.295349 ACGTTGACTAAAGCGAGAGGAA 59.705 45.455 0.00 0.00 0.00 3.36
2871 5249 1.884579 ACGTTGACTAAAGCGAGAGGA 59.115 47.619 0.00 0.00 0.00 3.71
2872 5250 2.349297 ACGTTGACTAAAGCGAGAGG 57.651 50.000 0.00 0.00 0.00 3.69
2873 5251 3.602915 GTGTACGTTGACTAAAGCGAGAG 59.397 47.826 0.00 0.00 0.00 3.20
2874 5252 3.003585 TGTGTACGTTGACTAAAGCGAGA 59.996 43.478 0.00 0.00 0.00 4.04
2875 5253 3.302555 TGTGTACGTTGACTAAAGCGAG 58.697 45.455 0.00 0.00 0.00 5.03
2876 5254 3.003585 TCTGTGTACGTTGACTAAAGCGA 59.996 43.478 0.00 0.00 0.00 4.93
2877 5255 3.302555 TCTGTGTACGTTGACTAAAGCG 58.697 45.455 0.00 0.00 0.00 4.68
2878 5256 5.646467 TTTCTGTGTACGTTGACTAAAGC 57.354 39.130 0.00 0.00 0.00 3.51
2879 5257 6.128634 GGGATTTCTGTGTACGTTGACTAAAG 60.129 42.308 0.00 0.00 0.00 1.85
2880 5258 5.697633 GGGATTTCTGTGTACGTTGACTAAA 59.302 40.000 0.00 0.00 0.00 1.85
2881 5259 5.221481 TGGGATTTCTGTGTACGTTGACTAA 60.221 40.000 0.00 0.00 0.00 2.24
2882 5260 4.281435 TGGGATTTCTGTGTACGTTGACTA 59.719 41.667 0.00 0.00 0.00 2.59
2883 5261 3.070446 TGGGATTTCTGTGTACGTTGACT 59.930 43.478 0.00 0.00 0.00 3.41
2884 5262 3.395639 TGGGATTTCTGTGTACGTTGAC 58.604 45.455 0.00 0.00 0.00 3.18
2885 5263 3.755112 TGGGATTTCTGTGTACGTTGA 57.245 42.857 0.00 0.00 0.00 3.18
2886 5264 3.374058 GGATGGGATTTCTGTGTACGTTG 59.626 47.826 0.00 0.00 0.00 4.10
2887 5265 3.263425 AGGATGGGATTTCTGTGTACGTT 59.737 43.478 0.00 0.00 0.00 3.99
2888 5266 2.838202 AGGATGGGATTTCTGTGTACGT 59.162 45.455 0.00 0.00 0.00 3.57
2889 5267 3.543680 AGGATGGGATTTCTGTGTACG 57.456 47.619 0.00 0.00 0.00 3.67
2890 5268 4.200092 GGAAGGATGGGATTTCTGTGTAC 58.800 47.826 0.00 0.00 0.00 2.90
2891 5269 3.849574 TGGAAGGATGGGATTTCTGTGTA 59.150 43.478 0.00 0.00 0.00 2.90
2892 5270 2.649312 TGGAAGGATGGGATTTCTGTGT 59.351 45.455 0.00 0.00 0.00 3.72
2893 5271 3.019564 GTGGAAGGATGGGATTTCTGTG 58.980 50.000 0.00 0.00 0.00 3.66
2894 5272 2.922283 AGTGGAAGGATGGGATTTCTGT 59.078 45.455 0.00 0.00 0.00 3.41
2895 5273 3.659183 AGTGGAAGGATGGGATTTCTG 57.341 47.619 0.00 0.00 0.00 3.02
2896 5274 3.854994 AGAAGTGGAAGGATGGGATTTCT 59.145 43.478 0.00 0.00 0.00 2.52
2897 5275 4.203226 GAGAAGTGGAAGGATGGGATTTC 58.797 47.826 0.00 0.00 0.00 2.17
2898 5276 3.053320 GGAGAAGTGGAAGGATGGGATTT 60.053 47.826 0.00 0.00 0.00 2.17
2899 5277 2.511637 GGAGAAGTGGAAGGATGGGATT 59.488 50.000 0.00 0.00 0.00 3.01
2900 5278 2.131023 GGAGAAGTGGAAGGATGGGAT 58.869 52.381 0.00 0.00 0.00 3.85
2901 5279 1.584724 GGAGAAGTGGAAGGATGGGA 58.415 55.000 0.00 0.00 0.00 4.37
2902 5280 0.179000 CGGAGAAGTGGAAGGATGGG 59.821 60.000 0.00 0.00 0.00 4.00
2903 5281 0.462759 GCGGAGAAGTGGAAGGATGG 60.463 60.000 0.00 0.00 0.00 3.51
2904 5282 0.807667 CGCGGAGAAGTGGAAGGATG 60.808 60.000 0.00 0.00 0.00 3.51
2905 5283 0.970937 TCGCGGAGAAGTGGAAGGAT 60.971 55.000 6.13 0.00 0.00 3.24
2906 5284 1.595993 CTCGCGGAGAAGTGGAAGGA 61.596 60.000 6.13 0.00 0.00 3.36
2907 5285 1.153745 CTCGCGGAGAAGTGGAAGG 60.154 63.158 6.13 0.00 0.00 3.46
2908 5286 0.734253 CACTCGCGGAGAAGTGGAAG 60.734 60.000 15.72 0.60 33.32 3.46
2909 5287 1.289066 CACTCGCGGAGAAGTGGAA 59.711 57.895 15.72 0.00 33.32 3.53
2910 5288 1.863662 GACACTCGCGGAGAAGTGGA 61.864 60.000 24.13 0.00 34.50 4.02
2911 5289 1.444553 GACACTCGCGGAGAAGTGG 60.445 63.158 24.13 10.59 34.50 4.00
2912 5290 0.455295 GAGACACTCGCGGAGAAGTG 60.455 60.000 20.34 20.34 35.54 3.16
2913 5291 0.606944 AGAGACACTCGCGGAGAAGT 60.607 55.000 6.13 0.00 35.36 3.01
2914 5292 0.179176 CAGAGACACTCGCGGAGAAG 60.179 60.000 6.13 0.00 35.36 2.85
2915 5293 1.876664 CAGAGACACTCGCGGAGAA 59.123 57.895 6.13 0.00 35.36 2.87
2916 5294 2.691771 GCAGAGACACTCGCGGAGA 61.692 63.158 6.13 0.00 35.36 3.71
2917 5295 2.202544 GCAGAGACACTCGCGGAG 60.203 66.667 6.13 5.03 35.36 4.63
2918 5296 3.749064 GGCAGAGACACTCGCGGA 61.749 66.667 6.13 0.00 35.36 5.54
2919 5297 4.803426 GGGCAGAGACACTCGCGG 62.803 72.222 6.13 0.00 35.36 6.46
2920 5298 3.691744 GAGGGCAGAGACACTCGCG 62.692 68.421 0.00 0.00 35.36 5.87
2921 5299 2.183046 GAGGGCAGAGACACTCGC 59.817 66.667 0.00 0.00 35.36 5.03
2922 5300 2.487428 CGAGGGCAGAGACACTCG 59.513 66.667 1.40 1.40 45.34 4.18
2923 5301 2.888863 CCGAGGGCAGAGACACTC 59.111 66.667 0.00 0.00 0.00 3.51
2973 5351 4.722700 CAAGGGGACGGGGTGCTG 62.723 72.222 0.00 0.00 0.00 4.41
2981 5359 4.308458 TGGTGACGCAAGGGGACG 62.308 66.667 0.00 0.00 46.39 4.79
2982 5360 2.668550 GTGGTGACGCAAGGGGAC 60.669 66.667 0.00 0.00 46.39 4.46
2983 5361 2.448582 AAGTGGTGACGCAAGGGGA 61.449 57.895 0.00 0.00 45.56 4.81
2984 5362 2.113139 AAGTGGTGACGCAAGGGG 59.887 61.111 0.00 0.00 45.56 4.79
2985 5363 1.507141 GACAAGTGGTGACGCAAGGG 61.507 60.000 0.00 0.00 45.56 3.95
2986 5364 1.831389 CGACAAGTGGTGACGCAAGG 61.831 60.000 0.00 0.00 45.56 3.61
2987 5365 1.564622 CGACAAGTGGTGACGCAAG 59.435 57.895 0.00 0.00 45.56 4.01
2988 5366 3.712655 CGACAAGTGGTGACGCAA 58.287 55.556 0.00 0.00 45.56 4.85
2991 5369 2.943345 GCTGCGACAAGTGGTGACG 61.943 63.158 0.00 0.00 46.26 4.35
2992 5370 1.887242 TGCTGCGACAAGTGGTGAC 60.887 57.895 0.00 0.00 0.00 3.67
2993 5371 1.887242 GTGCTGCGACAAGTGGTGA 60.887 57.895 0.00 0.00 0.00 4.02
2994 5372 2.633657 GTGCTGCGACAAGTGGTG 59.366 61.111 0.00 0.00 0.00 4.17
2995 5373 2.591715 GGTGCTGCGACAAGTGGT 60.592 61.111 0.00 0.00 0.00 4.16
2996 5374 2.591429 TGGTGCTGCGACAAGTGG 60.591 61.111 0.00 0.00 0.00 4.00
2997 5375 2.941333 CTGGTGCTGCGACAAGTG 59.059 61.111 0.00 0.00 0.00 3.16
2998 5376 2.974698 GCTGGTGCTGCGACAAGT 60.975 61.111 0.00 0.00 36.03 3.16
3005 5383 3.181967 CTACGACGCTGGTGCTGC 61.182 66.667 0.00 0.00 36.97 5.25
3006 5384 3.181967 GCTACGACGCTGGTGCTG 61.182 66.667 0.00 0.00 36.97 4.41
3007 5385 4.436998 GGCTACGACGCTGGTGCT 62.437 66.667 0.00 0.00 36.97 4.40
3009 5387 4.814294 GGGGCTACGACGCTGGTG 62.814 72.222 0.00 0.00 0.00 4.17
3011 5389 4.514577 CAGGGGCTACGACGCTGG 62.515 72.222 5.92 0.00 46.06 4.85
3015 5393 4.814294 GTGGCAGGGGCTACGACG 62.814 72.222 0.00 0.00 41.80 5.12
3026 5404 3.535629 TTCAGCAGACGGGTGGCAG 62.536 63.158 4.95 0.00 45.09 4.85
3027 5405 3.535629 CTTCAGCAGACGGGTGGCA 62.536 63.158 4.95 0.00 45.09 4.92
3028 5406 2.743928 CTTCAGCAGACGGGTGGC 60.744 66.667 4.95 0.00 45.09 5.01
3029 5407 2.743928 GCTTCAGCAGACGGGTGG 60.744 66.667 4.95 0.00 45.09 4.61
3030 5408 1.739562 GAGCTTCAGCAGACGGGTG 60.740 63.158 0.75 0.00 46.38 4.61
3031 5409 2.659610 GAGCTTCAGCAGACGGGT 59.340 61.111 0.75 0.00 45.16 5.28
3032 5410 2.507992 CGAGCTTCAGCAGACGGG 60.508 66.667 0.75 0.00 45.16 5.28
3033 5411 3.184683 GCGAGCTTCAGCAGACGG 61.185 66.667 0.75 0.00 45.16 4.79
3034 5412 3.540014 CGCGAGCTTCAGCAGACG 61.540 66.667 0.00 5.30 45.16 4.18
3035 5413 1.950098 GAACGCGAGCTTCAGCAGAC 61.950 60.000 15.93 0.00 45.16 3.51
3036 5414 1.734477 GAACGCGAGCTTCAGCAGA 60.734 57.895 15.93 0.00 45.16 4.26
3037 5415 2.774774 GAACGCGAGCTTCAGCAG 59.225 61.111 15.93 0.00 45.16 4.24
3038 5416 3.105782 CGAACGCGAGCTTCAGCA 61.106 61.111 15.93 0.00 45.16 4.41
3039 5417 4.491328 GCGAACGCGAGCTTCAGC 62.491 66.667 15.93 10.67 40.82 4.26
3040 5418 3.843240 GGCGAACGCGAGCTTCAG 61.843 66.667 15.93 4.38 43.06 3.02
3066 5444 4.485834 TCGATGAACCGCCGGACG 62.486 66.667 11.71 8.73 43.15 4.79
3067 5445 2.884207 GTCGATGAACCGCCGGAC 60.884 66.667 11.71 3.88 0.00 4.79
3068 5446 4.137872 GGTCGATGAACCGCCGGA 62.138 66.667 11.71 0.00 0.00 5.14
3069 5447 4.444838 TGGTCGATGAACCGCCGG 62.445 66.667 0.00 0.00 42.62 6.13
3070 5448 2.885644 CTGGTCGATGAACCGCCG 60.886 66.667 0.00 0.00 42.62 6.46
3071 5449 3.195698 GCTGGTCGATGAACCGCC 61.196 66.667 0.00 0.00 42.62 6.13
3072 5450 3.195698 GGCTGGTCGATGAACCGC 61.196 66.667 0.00 0.00 42.62 5.68
3073 5451 2.511600 GGGCTGGTCGATGAACCG 60.512 66.667 0.00 0.00 42.62 4.44
3074 5452 2.124695 GGGGCTGGTCGATGAACC 60.125 66.667 0.00 0.00 39.94 3.62
3075 5453 2.311688 ATCGGGGCTGGTCGATGAAC 62.312 60.000 0.00 0.00 43.37 3.18
3076 5454 1.622607 AATCGGGGCTGGTCGATGAA 61.623 55.000 0.00 0.00 44.10 2.57
3077 5455 2.063979 AATCGGGGCTGGTCGATGA 61.064 57.895 0.00 0.00 44.10 2.92
3078 5456 1.889105 CAATCGGGGCTGGTCGATG 60.889 63.158 0.00 0.00 44.10 3.84
3079 5457 1.046472 TACAATCGGGGCTGGTCGAT 61.046 55.000 0.00 0.00 46.40 3.59
3080 5458 1.672854 CTACAATCGGGGCTGGTCGA 61.673 60.000 0.00 0.00 39.79 4.20
3081 5459 1.227263 CTACAATCGGGGCTGGTCG 60.227 63.158 0.00 0.00 0.00 4.79
3082 5460 1.523938 GCTACAATCGGGGCTGGTC 60.524 63.158 0.00 0.00 0.00 4.02
3083 5461 1.847798 TTGCTACAATCGGGGCTGGT 61.848 55.000 0.00 0.00 0.00 4.00
3084 5462 0.466189 ATTGCTACAATCGGGGCTGG 60.466 55.000 0.00 0.00 0.00 4.85
3085 5463 1.392589 AATTGCTACAATCGGGGCTG 58.607 50.000 0.00 0.00 0.00 4.85
3086 5464 2.572290 GTAATTGCTACAATCGGGGCT 58.428 47.619 0.00 0.00 0.00 5.19
3087 5465 1.607148 GGTAATTGCTACAATCGGGGC 59.393 52.381 0.00 0.00 31.45 5.80
3088 5466 2.925724 TGGTAATTGCTACAATCGGGG 58.074 47.619 0.00 0.00 31.45 5.73
3089 5467 3.304659 GCATGGTAATTGCTACAATCGGG 60.305 47.826 0.00 0.00 37.14 5.14
3090 5468 3.304659 GGCATGGTAATTGCTACAATCGG 60.305 47.826 0.00 0.00 40.03 4.18
3091 5469 3.606846 CGGCATGGTAATTGCTACAATCG 60.607 47.826 0.00 0.00 40.03 3.34
3092 5470 3.304659 CCGGCATGGTAATTGCTACAATC 60.305 47.826 0.00 0.00 40.03 2.67
3093 5471 2.622942 CCGGCATGGTAATTGCTACAAT 59.377 45.455 0.00 0.00 40.03 2.71
3094 5472 2.020720 CCGGCATGGTAATTGCTACAA 58.979 47.619 0.00 0.00 40.03 2.41
3095 5473 1.674359 CCGGCATGGTAATTGCTACA 58.326 50.000 0.00 0.00 40.03 2.74
3111 5489 0.750249 AACCTTTTTGCTGGAACCGG 59.250 50.000 0.00 0.00 0.00 5.28
3112 5490 1.599419 CGAACCTTTTTGCTGGAACCG 60.599 52.381 0.00 0.00 0.00 4.44
3113 5491 1.269569 CCGAACCTTTTTGCTGGAACC 60.270 52.381 0.00 0.00 0.00 3.62
3114 5492 1.868109 GCCGAACCTTTTTGCTGGAAC 60.868 52.381 0.00 0.00 0.00 3.62
3115 5493 0.387565 GCCGAACCTTTTTGCTGGAA 59.612 50.000 0.00 0.00 0.00 3.53
3116 5494 0.467290 AGCCGAACCTTTTTGCTGGA 60.467 50.000 0.00 0.00 0.00 3.86
3117 5495 0.039165 GAGCCGAACCTTTTTGCTGG 60.039 55.000 0.00 0.00 31.23 4.85
3118 5496 0.667993 TGAGCCGAACCTTTTTGCTG 59.332 50.000 0.00 0.00 31.23 4.41
3119 5497 0.954452 CTGAGCCGAACCTTTTTGCT 59.046 50.000 0.00 0.00 34.40 3.91
3120 5498 0.039165 CCTGAGCCGAACCTTTTTGC 60.039 55.000 0.00 0.00 0.00 3.68
3121 5499 1.001378 CACCTGAGCCGAACCTTTTTG 60.001 52.381 0.00 0.00 0.00 2.44
3122 5500 1.318576 CACCTGAGCCGAACCTTTTT 58.681 50.000 0.00 0.00 0.00 1.94
3123 5501 1.172812 GCACCTGAGCCGAACCTTTT 61.173 55.000 0.00 0.00 0.00 2.27
3124 5502 1.600916 GCACCTGAGCCGAACCTTT 60.601 57.895 0.00 0.00 0.00 3.11
3125 5503 2.032681 GCACCTGAGCCGAACCTT 59.967 61.111 0.00 0.00 0.00 3.50
3126 5504 3.241530 TGCACCTGAGCCGAACCT 61.242 61.111 0.00 0.00 0.00 3.50
3156 5534 1.517238 TGGGCCTGCACCATAATAGA 58.483 50.000 4.53 0.00 31.83 1.98
3271 5649 6.362686 CGAAGTTCATCGTGAAATTGAAGAA 58.637 36.000 14.80 0.00 43.54 2.52
3281 5659 1.445410 CCGGCGAAGTTCATCGTGA 60.445 57.895 9.30 0.00 44.49 4.35
3293 5671 2.434185 GCTGTGTGAATCCGGCGA 60.434 61.111 9.30 0.00 0.00 5.54
3300 5678 1.066002 GCTGTTGTGTGCTGTGTGAAT 59.934 47.619 0.00 0.00 0.00 2.57
3328 5706 3.226346 TGTTAAGGAAGGTGACGATCG 57.774 47.619 14.88 14.88 0.00 3.69
3337 5715 4.848357 AGGTGATGACATGTTAAGGAAGG 58.152 43.478 0.00 0.00 0.00 3.46
3359 5737 5.421277 TCACGTTTTAGTCTGAAAGGTTGA 58.579 37.500 11.48 10.11 34.11 3.18
3497 6833 0.955428 GAGTTGGGCACGAGCATGAA 60.955 55.000 7.26 0.00 44.61 2.57
3498 6834 1.375908 GAGTTGGGCACGAGCATGA 60.376 57.895 7.26 0.00 44.61 3.07
3499 6835 2.401766 GGAGTTGGGCACGAGCATG 61.402 63.158 7.26 0.00 44.61 4.06
3500 6836 2.045926 GGAGTTGGGCACGAGCAT 60.046 61.111 7.26 0.00 44.61 3.79
3501 6837 4.680237 CGGAGTTGGGCACGAGCA 62.680 66.667 7.26 0.00 44.61 4.26
3502 6838 4.373116 TCGGAGTTGGGCACGAGC 62.373 66.667 0.00 0.00 41.10 5.03
3503 6839 2.432628 GTCGGAGTTGGGCACGAG 60.433 66.667 0.00 0.00 35.88 4.18
3518 6854 2.067013 GCTCAAAAGTACTGGTCGGTC 58.933 52.381 0.00 0.00 0.00 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.