Multiple sequence alignment - TraesCS1D01G395200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G395200 chr1D 100.000 5507 0 0 1 5507 463993969 463999475 0.000000e+00 10170.0
1 TraesCS1D01G395200 chr1D 88.182 220 17 2 5069 5288 463948283 463948073 2.550000e-63 254.0
2 TraesCS1D01G395200 chr1D 84.000 125 19 1 4943 5066 463948459 463948335 9.690000e-23 119.0
3 TraesCS1D01G395200 chr1B 94.139 1672 75 13 616 2270 640027608 640029273 0.000000e+00 2523.0
4 TraesCS1D01G395200 chr1B 92.035 1607 63 28 3250 4824 640030330 640031903 0.000000e+00 2198.0
5 TraesCS1D01G395200 chr1B 89.958 478 36 6 2790 3263 640029800 640030269 1.700000e-169 606.0
6 TraesCS1D01G395200 chr1B 86.635 419 41 9 5065 5480 639169499 639169093 3.030000e-122 449.0
7 TraesCS1D01G395200 chr1B 83.614 415 46 8 5068 5480 639090625 639090231 2.420000e-98 370.0
8 TraesCS1D01G395200 chr1B 92.593 243 16 2 4831 5072 640032003 640032244 1.140000e-91 348.0
9 TraesCS1D01G395200 chr1B 92.857 238 10 1 5062 5299 640032427 640032657 6.830000e-89 339.0
10 TraesCS1D01G395200 chr1B 85.714 315 30 2 5069 5383 639807596 639807297 8.900000e-83 318.0
11 TraesCS1D01G395200 chr1B 85.050 301 19 7 75 352 640027304 640027601 3.250000e-72 283.0
12 TraesCS1D01G395200 chr1B 84.878 205 17 9 2374 2578 640029369 640029559 1.570000e-45 195.0
13 TraesCS1D01G395200 chr1B 84.112 107 14 1 3832 3938 623352087 623352190 3.510000e-17 100.0
14 TraesCS1D01G395200 chr1B 93.651 63 3 1 1 62 640026910 640026972 5.870000e-15 93.5
15 TraesCS1D01G395200 chr1A 90.786 1693 82 32 615 2270 556086942 556088597 0.000000e+00 2194.0
16 TraesCS1D01G395200 chr1A 90.226 1729 89 42 3021 4738 556089486 556091145 0.000000e+00 2183.0
17 TraesCS1D01G395200 chr1A 95.197 583 18 3 4866 5440 556091846 556092426 0.000000e+00 913.0
18 TraesCS1D01G395200 chr1A 86.553 409 38 3 5074 5480 555960893 555960500 8.470000e-118 435.0
19 TraesCS1D01G395200 chr1A 84.653 404 45 8 5082 5480 555936777 555936386 2.410000e-103 387.0
20 TraesCS1D01G395200 chr1A 83.908 348 28 11 33 359 556086526 556086866 1.930000e-79 307.0
21 TraesCS1D01G395200 chr1A 88.406 207 13 7 2812 3013 556089126 556089326 7.130000e-59 239.0
22 TraesCS1D01G395200 chr1A 86.508 126 12 3 2455 2579 556088751 556088872 3.460000e-27 134.0
23 TraesCS1D01G395200 chr1A 81.600 125 22 1 4943 5066 555961074 555960950 9.760000e-18 102.0
24 TraesCS1D01G395200 chr7B 93.561 264 16 1 355 617 600755052 600754789 5.170000e-105 392.0
25 TraesCS1D01G395200 chr3B 92.910 268 16 3 355 620 236579633 236579367 2.410000e-103 387.0
26 TraesCS1D01G395200 chr3B 81.435 474 69 12 4003 4462 486611884 486611416 2.420000e-98 370.0
27 TraesCS1D01G395200 chr3B 82.372 312 43 2 3671 3982 486612243 486611944 1.520000e-65 261.0
28 TraesCS1D01G395200 chr3B 92.105 38 3 0 1365 1402 126664238 126664201 3.000000e-03 54.7
29 TraesCS1D01G395200 chr3A 80.822 511 83 11 4003 4502 493719196 493718690 2.410000e-103 387.0
30 TraesCS1D01G395200 chr3A 84.026 313 36 4 3671 3982 493719564 493719265 6.980000e-74 289.0
31 TraesCS1D01G395200 chr3A 90.244 41 4 0 1365 1405 95127013 95126973 3.000000e-03 54.7
32 TraesCS1D01G395200 chr4D 91.575 273 20 3 355 624 297107301 297107029 1.870000e-99 374.0
33 TraesCS1D01G395200 chr2D 92.366 262 20 0 356 617 331660768 331661029 1.870000e-99 374.0
34 TraesCS1D01G395200 chrUn 92.075 265 19 2 355 617 242128050 242128314 6.740000e-99 372.0
35 TraesCS1D01G395200 chrUn 92.308 39 3 0 1365 1403 34009910 34009948 7.710000e-04 56.5
36 TraesCS1D01G395200 chrUn 100.000 29 0 0 1365 1393 34465113 34465085 3.000000e-03 54.7
37 TraesCS1D01G395200 chr6A 92.075 265 19 2 355 617 105506434 105506698 6.740000e-99 372.0
38 TraesCS1D01G395200 chr6A 94.444 36 1 1 4898 4933 103297243 103297277 3.000000e-03 54.7
39 TraesCS1D01G395200 chr6D 91.544 272 18 4 355 623 262734957 262735226 2.420000e-98 370.0
40 TraesCS1D01G395200 chr6D 97.222 36 0 1 4898 4933 86017112 86017146 5.960000e-05 60.2
41 TraesCS1D01G395200 chr7D 90.681 279 20 4 355 628 287979895 287979618 3.130000e-97 366.0
42 TraesCS1D01G395200 chr2A 90.357 280 23 4 355 633 208098863 208099139 1.130000e-96 364.0
43 TraesCS1D01G395200 chr3D 79.688 512 87 15 4003 4502 372326122 372325616 2.440000e-93 353.0
44 TraesCS1D01G395200 chr3D 83.013 312 41 6 3671 3982 372326484 372326185 7.030000e-69 272.0
45 TraesCS1D01G395200 chr3D 100.000 29 0 0 1365 1393 1196712 1196684 3.000000e-03 54.7
46 TraesCS1D01G395200 chr3D 90.244 41 4 0 1365 1405 81057378 81057338 3.000000e-03 54.7
47 TraesCS1D01G395200 chr2B 83.486 109 11 4 3832 3938 761326612 761326715 1.630000e-15 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G395200 chr1D 463993969 463999475 5506 False 10170.0000 10170 100.000000 1 5507 1 chr1D.!!$F1 5506
1 TraesCS1D01G395200 chr1B 640026910 640032657 5747 False 823.1875 2523 90.645125 1 5299 8 chr1B.!!$F2 5298
2 TraesCS1D01G395200 chr1A 556086526 556092426 5900 False 995.0000 2194 89.171833 33 5440 6 chr1A.!!$F1 5407
3 TraesCS1D01G395200 chr1A 555960500 555961074 574 True 268.5000 435 84.076500 4943 5480 2 chr1A.!!$R2 537
4 TraesCS1D01G395200 chr3B 486611416 486612243 827 True 315.5000 370 81.903500 3671 4462 2 chr3B.!!$R3 791
5 TraesCS1D01G395200 chr3A 493718690 493719564 874 True 338.0000 387 82.424000 3671 4502 2 chr3A.!!$R2 831
6 TraesCS1D01G395200 chr3D 372325616 372326484 868 True 312.5000 353 81.350500 3671 4502 2 chr3D.!!$R3 831

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
370 720 0.042131 ACCATACTCCCTCCGTTCCA 59.958 55.0 0.00 0.0 0.00 3.53 F
1044 1394 0.321346 TCGTTCTGATCCTGCTTGCA 59.679 50.0 0.00 0.0 0.00 4.08 F
2293 2705 0.109781 GCTGTCGTCGTTACCCGTTA 60.110 55.0 0.00 0.0 37.94 3.18 F
2650 3110 0.108585 ACCAGTACACAGGCACAAGG 59.891 55.0 0.00 0.0 0.00 3.61 F
3150 3799 0.323087 GGGTCACCGGGCTACAAAAT 60.323 55.0 6.32 0.0 0.00 1.82 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2009 2380 1.140852 TCCACAGTGGAGTTGGTGAAG 59.859 52.381 19.21 0.00 42.67 3.02 R
2440 2852 0.182537 AATCATCATTCCCCGGCGAA 59.817 50.000 9.30 3.56 0.00 4.70 R
3181 3830 0.531200 ACCTAAGTACAGCGGAGTGC 59.469 55.000 0.00 0.00 46.98 4.40 R
3475 4213 0.603569 CCACTCCAGCTAGAACACGT 59.396 55.000 0.00 0.00 0.00 4.49 R
4557 5366 0.670162 ACGGGAAAGAACGAACGAGA 59.330 50.000 0.14 0.00 0.00 4.04 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 33 7.982761 TTGCGGAAAAATCCTTACTAAAGTA 57.017 32.000 0.00 0.00 0.00 2.24
115 441 6.262273 ACTTGATATCCAAATTAATTCGGCGT 59.738 34.615 6.85 0.00 33.76 5.68
118 444 4.974368 ATCCAAATTAATTCGGCGTTCA 57.026 36.364 6.85 0.00 0.00 3.18
135 461 5.732185 GGCGTTCAGTTTTGAAATTGTTTTG 59.268 36.000 0.00 0.00 44.49 2.44
138 464 6.960431 CGTTCAGTTTTGAAATTGTTTTGCAT 59.040 30.769 0.00 0.00 44.49 3.96
182 509 3.114065 CGACCTACGGATTCTTGCTTAC 58.886 50.000 0.00 0.00 38.46 2.34
183 510 3.455327 GACCTACGGATTCTTGCTTACC 58.545 50.000 0.00 0.00 0.00 2.85
185 512 3.454812 ACCTACGGATTCTTGCTTACCAT 59.545 43.478 0.00 0.00 0.00 3.55
186 513 4.058817 CCTACGGATTCTTGCTTACCATC 58.941 47.826 0.00 0.00 0.00 3.51
187 514 3.914426 ACGGATTCTTGCTTACCATCT 57.086 42.857 0.00 0.00 0.00 2.90
188 515 4.222124 ACGGATTCTTGCTTACCATCTT 57.778 40.909 0.00 0.00 0.00 2.40
189 516 3.941483 ACGGATTCTTGCTTACCATCTTG 59.059 43.478 0.00 0.00 0.00 3.02
190 517 3.242870 CGGATTCTTGCTTACCATCTTGC 60.243 47.826 0.00 0.00 0.00 4.01
198 542 2.286872 CTTACCATCTTGCAGCCTCTG 58.713 52.381 0.00 0.00 34.12 3.35
334 684 4.037858 GCATTGGCTAGAGGTTCATTTG 57.962 45.455 0.00 0.00 36.96 2.32
359 709 6.801539 TTCACAAATCACAGAACCATACTC 57.198 37.500 0.00 0.00 0.00 2.59
361 711 4.396166 CACAAATCACAGAACCATACTCCC 59.604 45.833 0.00 0.00 0.00 4.30
364 714 2.467880 TCACAGAACCATACTCCCTCC 58.532 52.381 0.00 0.00 0.00 4.30
365 715 1.137086 CACAGAACCATACTCCCTCCG 59.863 57.143 0.00 0.00 0.00 4.63
367 717 1.831736 CAGAACCATACTCCCTCCGTT 59.168 52.381 0.00 0.00 0.00 4.44
368 718 2.108970 AGAACCATACTCCCTCCGTTC 58.891 52.381 0.00 0.00 0.00 3.95
369 719 1.138464 GAACCATACTCCCTCCGTTCC 59.862 57.143 0.00 0.00 0.00 3.62
370 720 0.042131 ACCATACTCCCTCCGTTCCA 59.958 55.000 0.00 0.00 0.00 3.53
371 721 1.200519 CCATACTCCCTCCGTTCCAA 58.799 55.000 0.00 0.00 0.00 3.53
372 722 1.557832 CCATACTCCCTCCGTTCCAAA 59.442 52.381 0.00 0.00 0.00 3.28
376 726 5.456186 CCATACTCCCTCCGTTCCAAAATAT 60.456 44.000 0.00 0.00 0.00 1.28
377 727 6.239772 CCATACTCCCTCCGTTCCAAAATATA 60.240 42.308 0.00 0.00 0.00 0.86
378 728 5.291905 ACTCCCTCCGTTCCAAAATATAG 57.708 43.478 0.00 0.00 0.00 1.31
379 729 4.102681 ACTCCCTCCGTTCCAAAATATAGG 59.897 45.833 0.00 0.00 0.00 2.57
380 730 4.042174 TCCCTCCGTTCCAAAATATAGGT 58.958 43.478 0.00 0.00 0.00 3.08
381 731 4.134563 CCCTCCGTTCCAAAATATAGGTG 58.865 47.826 0.00 0.00 0.00 4.00
382 732 4.384868 CCCTCCGTTCCAAAATATAGGTGT 60.385 45.833 0.00 0.00 0.00 4.16
384 734 6.465321 CCCTCCGTTCCAAAATATAGGTGTAT 60.465 42.308 0.00 0.00 0.00 2.29
385 735 7.256404 CCCTCCGTTCCAAAATATAGGTGTATA 60.256 40.741 0.00 0.00 0.00 1.47
386 736 7.817962 CCTCCGTTCCAAAATATAGGTGTATAG 59.182 40.741 0.00 0.00 0.00 1.31
415 765 7.825331 TGGTATGGAAATTAAAGAACACACA 57.175 32.000 0.00 0.00 0.00 3.72
416 766 8.415950 TGGTATGGAAATTAAAGAACACACAT 57.584 30.769 0.00 0.00 0.00 3.21
417 767 8.303156 TGGTATGGAAATTAAAGAACACACATG 58.697 33.333 0.00 0.00 0.00 3.21
418 768 7.759433 GGTATGGAAATTAAAGAACACACATGG 59.241 37.037 0.00 0.00 0.00 3.66
420 770 6.980593 TGGAAATTAAAGAACACACATGGAG 58.019 36.000 0.00 0.00 0.00 3.86
421 771 6.015519 TGGAAATTAAAGAACACACATGGAGG 60.016 38.462 0.00 0.00 0.00 4.30
422 772 5.982890 AATTAAAGAACACACATGGAGGG 57.017 39.130 0.00 0.00 0.00 4.30
424 774 3.593442 AAAGAACACACATGGAGGGAA 57.407 42.857 0.00 0.00 0.00 3.97
425 775 3.593442 AAGAACACACATGGAGGGAAA 57.407 42.857 0.00 0.00 0.00 3.13
426 776 3.593442 AGAACACACATGGAGGGAAAA 57.407 42.857 0.00 0.00 0.00 2.29
427 777 4.118168 AGAACACACATGGAGGGAAAAT 57.882 40.909 0.00 0.00 0.00 1.82
428 778 4.482990 AGAACACACATGGAGGGAAAATT 58.517 39.130 0.00 0.00 0.00 1.82
429 779 4.901250 AGAACACACATGGAGGGAAAATTT 59.099 37.500 0.00 0.00 0.00 1.82
430 780 4.871933 ACACACATGGAGGGAAAATTTC 57.128 40.909 0.00 0.00 0.00 2.17
432 782 4.039124 ACACACATGGAGGGAAAATTTCAC 59.961 41.667 8.09 3.68 0.00 3.18
433 783 4.039004 CACACATGGAGGGAAAATTTCACA 59.961 41.667 10.88 2.87 34.83 3.58
434 784 4.653341 ACACATGGAGGGAAAATTTCACAA 59.347 37.500 10.88 0.00 34.83 3.33
435 785 5.221501 ACACATGGAGGGAAAATTTCACAAG 60.222 40.000 10.88 2.52 34.83 3.16
436 786 4.901250 ACATGGAGGGAAAATTTCACAAGT 59.099 37.500 10.88 3.07 34.83 3.16
437 787 5.366477 ACATGGAGGGAAAATTTCACAAGTT 59.634 36.000 10.88 0.00 34.83 2.66
438 788 5.948742 TGGAGGGAAAATTTCACAAGTTT 57.051 34.783 10.88 0.00 34.83 2.66
439 789 6.306643 TGGAGGGAAAATTTCACAAGTTTT 57.693 33.333 10.88 0.00 34.83 2.43
440 790 6.112058 TGGAGGGAAAATTTCACAAGTTTTG 58.888 36.000 10.88 0.00 34.83 2.44
441 791 5.527214 GGAGGGAAAATTTCACAAGTTTTGG 59.473 40.000 10.88 0.00 34.83 3.28
442 792 5.436175 AGGGAAAATTTCACAAGTTTTGGG 58.564 37.500 10.88 0.00 34.83 4.12
443 793 4.036262 GGGAAAATTTCACAAGTTTTGGGC 59.964 41.667 8.09 0.00 30.39 5.36
444 794 4.260579 GGAAAATTTCACAAGTTTTGGGCG 60.261 41.667 8.09 0.00 30.39 6.13
445 795 3.810310 AATTTCACAAGTTTTGGGCGA 57.190 38.095 0.00 0.00 32.92 5.54
446 796 2.861462 TTTCACAAGTTTTGGGCGAG 57.139 45.000 0.00 0.00 32.92 5.03
447 797 2.045561 TTCACAAGTTTTGGGCGAGA 57.954 45.000 0.00 0.00 32.92 4.04
448 798 2.270352 TCACAAGTTTTGGGCGAGAT 57.730 45.000 0.00 0.00 32.92 2.75
449 799 2.582052 TCACAAGTTTTGGGCGAGATT 58.418 42.857 0.00 0.00 32.92 2.40
450 800 2.955660 TCACAAGTTTTGGGCGAGATTT 59.044 40.909 0.00 0.00 32.92 2.17
451 801 3.383185 TCACAAGTTTTGGGCGAGATTTT 59.617 39.130 0.00 0.00 32.92 1.82
452 802 4.580995 TCACAAGTTTTGGGCGAGATTTTA 59.419 37.500 0.00 0.00 32.92 1.52
453 803 4.679654 CACAAGTTTTGGGCGAGATTTTAC 59.320 41.667 0.00 0.00 34.12 2.01
454 804 4.234574 CAAGTTTTGGGCGAGATTTTACC 58.765 43.478 0.00 0.00 0.00 2.85
455 805 3.492337 AGTTTTGGGCGAGATTTTACCA 58.508 40.909 0.00 0.00 0.00 3.25
456 806 3.506067 AGTTTTGGGCGAGATTTTACCAG 59.494 43.478 0.00 0.00 32.01 4.00
457 807 3.426787 TTTGGGCGAGATTTTACCAGA 57.573 42.857 0.00 0.00 32.01 3.86
458 808 2.396590 TGGGCGAGATTTTACCAGAC 57.603 50.000 0.00 0.00 0.00 3.51
459 809 1.906574 TGGGCGAGATTTTACCAGACT 59.093 47.619 0.00 0.00 0.00 3.24
460 810 3.101437 TGGGCGAGATTTTACCAGACTA 58.899 45.455 0.00 0.00 0.00 2.59
461 811 3.516300 TGGGCGAGATTTTACCAGACTAA 59.484 43.478 0.00 0.00 0.00 2.24
462 812 4.163458 TGGGCGAGATTTTACCAGACTAAT 59.837 41.667 0.00 0.00 0.00 1.73
463 813 5.123936 GGGCGAGATTTTACCAGACTAATT 58.876 41.667 0.00 0.00 0.00 1.40
464 814 5.007724 GGGCGAGATTTTACCAGACTAATTG 59.992 44.000 0.00 0.00 0.00 2.32
465 815 5.815740 GGCGAGATTTTACCAGACTAATTGA 59.184 40.000 0.00 0.00 0.00 2.57
466 816 6.238130 GGCGAGATTTTACCAGACTAATTGAC 60.238 42.308 0.00 0.00 0.00 3.18
467 817 6.312918 GCGAGATTTTACCAGACTAATTGACA 59.687 38.462 0.00 0.00 0.00 3.58
468 818 7.011482 GCGAGATTTTACCAGACTAATTGACAT 59.989 37.037 0.00 0.00 0.00 3.06
469 819 8.331022 CGAGATTTTACCAGACTAATTGACATG 58.669 37.037 0.00 0.00 0.00 3.21
470 820 9.383519 GAGATTTTACCAGACTAATTGACATGA 57.616 33.333 0.00 0.00 0.00 3.07
471 821 9.388506 AGATTTTACCAGACTAATTGACATGAG 57.611 33.333 0.00 0.00 0.00 2.90
472 822 9.383519 GATTTTACCAGACTAATTGACATGAGA 57.616 33.333 0.00 0.00 0.00 3.27
473 823 9.739276 ATTTTACCAGACTAATTGACATGAGAA 57.261 29.630 0.00 0.00 0.00 2.87
474 824 9.567776 TTTTACCAGACTAATTGACATGAGAAA 57.432 29.630 0.00 0.00 0.00 2.52
475 825 9.567776 TTTACCAGACTAATTGACATGAGAAAA 57.432 29.630 0.00 0.00 0.00 2.29
476 826 9.739276 TTACCAGACTAATTGACATGAGAAAAT 57.261 29.630 0.00 0.00 0.00 1.82
478 828 9.388506 ACCAGACTAATTGACATGAGAAAATAG 57.611 33.333 0.00 0.49 0.00 1.73
479 829 9.605275 CCAGACTAATTGACATGAGAAAATAGA 57.395 33.333 0.00 0.00 0.00 1.98
481 831 9.829507 AGACTAATTGACATGAGAAAATAGAGG 57.170 33.333 0.00 0.00 0.00 3.69
482 832 9.823647 GACTAATTGACATGAGAAAATAGAGGA 57.176 33.333 0.00 0.00 0.00 3.71
483 833 9.829507 ACTAATTGACATGAGAAAATAGAGGAG 57.170 33.333 0.00 0.00 0.00 3.69
484 834 7.565323 AATTGACATGAGAAAATAGAGGAGC 57.435 36.000 0.00 0.00 0.00 4.70
485 835 5.946942 TGACATGAGAAAATAGAGGAGCT 57.053 39.130 0.00 0.00 0.00 4.09
486 836 6.305272 TGACATGAGAAAATAGAGGAGCTT 57.695 37.500 0.00 0.00 0.00 3.74
487 837 6.111382 TGACATGAGAAAATAGAGGAGCTTG 58.889 40.000 0.00 0.00 0.00 4.01
488 838 4.880696 ACATGAGAAAATAGAGGAGCTTGC 59.119 41.667 0.00 0.00 0.00 4.01
489 839 3.878778 TGAGAAAATAGAGGAGCTTGCC 58.121 45.455 0.00 0.00 0.00 4.52
490 840 3.521126 TGAGAAAATAGAGGAGCTTGCCT 59.479 43.478 0.00 0.00 42.17 4.75
491 841 3.876320 GAGAAAATAGAGGAGCTTGCCTG 59.124 47.826 0.00 0.00 38.73 4.85
492 842 3.521126 AGAAAATAGAGGAGCTTGCCTGA 59.479 43.478 0.00 0.00 38.73 3.86
493 843 4.165758 AGAAAATAGAGGAGCTTGCCTGAT 59.834 41.667 0.00 0.00 38.73 2.90
494 844 5.367937 AGAAAATAGAGGAGCTTGCCTGATA 59.632 40.000 0.00 0.00 38.73 2.15
495 845 5.839517 AAATAGAGGAGCTTGCCTGATAT 57.160 39.130 0.00 0.00 38.73 1.63
496 846 6.942163 AAATAGAGGAGCTTGCCTGATATA 57.058 37.500 0.00 0.00 38.73 0.86
497 847 6.942163 AATAGAGGAGCTTGCCTGATATAA 57.058 37.500 0.00 0.00 38.73 0.98
498 848 4.888326 AGAGGAGCTTGCCTGATATAAG 57.112 45.455 0.00 0.00 38.73 1.73
499 849 3.582208 AGAGGAGCTTGCCTGATATAAGG 59.418 47.826 0.98 0.98 38.73 2.69
500 850 3.580458 GAGGAGCTTGCCTGATATAAGGA 59.420 47.826 10.74 0.00 40.02 3.36
501 851 3.976654 AGGAGCTTGCCTGATATAAGGAA 59.023 43.478 10.74 0.00 40.02 3.36
502 852 4.413520 AGGAGCTTGCCTGATATAAGGAAA 59.586 41.667 10.74 4.67 40.02 3.13
503 853 5.074239 AGGAGCTTGCCTGATATAAGGAAAT 59.926 40.000 10.74 0.00 40.02 2.17
504 854 5.414144 GGAGCTTGCCTGATATAAGGAAATC 59.586 44.000 10.74 1.11 40.02 2.17
505 855 6.198237 AGCTTGCCTGATATAAGGAAATCT 57.802 37.500 10.74 3.73 40.02 2.40
506 856 7.321717 AGCTTGCCTGATATAAGGAAATCTA 57.678 36.000 10.74 0.00 40.02 1.98
507 857 7.749666 AGCTTGCCTGATATAAGGAAATCTAA 58.250 34.615 10.74 0.00 40.02 2.10
508 858 8.389366 AGCTTGCCTGATATAAGGAAATCTAAT 58.611 33.333 10.74 0.00 40.02 1.73
509 859 8.672815 GCTTGCCTGATATAAGGAAATCTAATC 58.327 37.037 10.74 0.00 40.02 1.75
510 860 9.730705 CTTGCCTGATATAAGGAAATCTAATCA 57.269 33.333 10.74 0.00 40.02 2.57
542 892 3.609103 AAATATCCAAACGAGCGATGC 57.391 42.857 0.00 0.00 0.00 3.91
543 893 2.238942 ATATCCAAACGAGCGATGCA 57.761 45.000 0.00 0.00 0.00 3.96
544 894 2.017138 TATCCAAACGAGCGATGCAA 57.983 45.000 0.00 0.00 0.00 4.08
545 895 0.447801 ATCCAAACGAGCGATGCAAC 59.552 50.000 0.00 0.00 0.00 4.17
546 896 1.509787 CCAAACGAGCGATGCAACG 60.510 57.895 12.54 12.54 36.89 4.10
555 905 3.218721 CGATGCAACGCAATACACC 57.781 52.632 2.61 0.00 43.62 4.16
556 906 0.726827 CGATGCAACGCAATACACCT 59.273 50.000 2.61 0.00 43.62 4.00
557 907 1.130373 CGATGCAACGCAATACACCTT 59.870 47.619 2.61 0.00 43.62 3.50
558 908 2.350192 CGATGCAACGCAATACACCTTA 59.650 45.455 2.61 0.00 43.62 2.69
559 909 3.002246 CGATGCAACGCAATACACCTTAT 59.998 43.478 2.61 0.00 43.62 1.73
560 910 4.210328 CGATGCAACGCAATACACCTTATA 59.790 41.667 2.61 0.00 43.62 0.98
561 911 5.107104 CGATGCAACGCAATACACCTTATAT 60.107 40.000 2.61 0.00 43.62 0.86
562 912 6.565811 CGATGCAACGCAATACACCTTATATT 60.566 38.462 2.61 0.00 43.62 1.28
563 913 6.443934 TGCAACGCAATACACCTTATATTT 57.556 33.333 0.00 0.00 34.76 1.40
564 914 6.491394 TGCAACGCAATACACCTTATATTTC 58.509 36.000 0.00 0.00 34.76 2.17
565 915 6.094186 TGCAACGCAATACACCTTATATTTCA 59.906 34.615 0.00 0.00 34.76 2.69
566 916 6.632834 GCAACGCAATACACCTTATATTTCAG 59.367 38.462 0.00 0.00 0.00 3.02
567 917 7.466725 GCAACGCAATACACCTTATATTTCAGA 60.467 37.037 0.00 0.00 0.00 3.27
568 918 8.559536 CAACGCAATACACCTTATATTTCAGAT 58.440 33.333 0.00 0.00 0.00 2.90
569 919 8.677148 ACGCAATACACCTTATATTTCAGATT 57.323 30.769 0.00 0.00 0.00 2.40
570 920 9.120538 ACGCAATACACCTTATATTTCAGATTT 57.879 29.630 0.00 0.00 0.00 2.17
571 921 9.950680 CGCAATACACCTTATATTTCAGATTTT 57.049 29.630 0.00 0.00 0.00 1.82
608 958 8.059798 TCTATACACCCTATATTAAGGAACGC 57.940 38.462 0.00 0.00 39.15 4.84
609 959 6.675413 ATACACCCTATATTAAGGAACGCA 57.325 37.500 0.00 0.00 39.15 5.24
610 960 4.957296 ACACCCTATATTAAGGAACGCAG 58.043 43.478 0.00 0.00 39.15 5.18
611 961 4.202326 ACACCCTATATTAAGGAACGCAGG 60.202 45.833 0.00 0.00 39.15 4.85
612 962 3.326880 ACCCTATATTAAGGAACGCAGGG 59.673 47.826 0.00 0.00 45.84 4.45
613 963 3.581332 CCCTATATTAAGGAACGCAGGGA 59.419 47.826 0.00 0.00 43.57 4.20
631 981 6.072508 CGCAGGGAGTAATATTTATGTGCAAT 60.073 38.462 0.00 0.00 0.00 3.56
668 1018 5.350633 GCACATAGCATTATTTTGGCAAGA 58.649 37.500 0.00 0.00 44.79 3.02
669 1019 5.987347 GCACATAGCATTATTTTGGCAAGAT 59.013 36.000 8.42 8.42 44.79 2.40
711 1061 1.252175 GCAGACACTGTCCTCTGAGA 58.748 55.000 6.17 0.00 36.75 3.27
791 1141 2.107950 AATGATTCTCGACCCGCAAA 57.892 45.000 0.00 0.00 0.00 3.68
963 1313 3.109612 CTGCTCAGCTCGCCATTGC 62.110 63.158 0.00 0.00 0.00 3.56
992 1342 2.359230 GCAGCTTGCGAAGGAGGT 60.359 61.111 0.00 0.00 31.71 3.85
996 1346 2.035442 GCTTGCGAAGGAGGTGGAC 61.035 63.158 0.00 0.00 0.00 4.02
1041 1391 2.672478 CGTTCTCGTTCTGATCCTGCTT 60.672 50.000 0.00 0.00 0.00 3.91
1044 1394 0.321346 TCGTTCTGATCCTGCTTGCA 59.679 50.000 0.00 0.00 0.00 4.08
1050 1400 1.132453 CTGATCCTGCTTGCATGTGTG 59.868 52.381 1.14 0.00 0.00 3.82
1198 1548 2.900273 GGCACGCCTACATCTCCA 59.100 61.111 0.00 0.00 0.00 3.86
1199 1549 1.521681 GGCACGCCTACATCTCCAC 60.522 63.158 0.00 0.00 0.00 4.02
1200 1550 1.521681 GCACGCCTACATCTCCACC 60.522 63.158 0.00 0.00 0.00 4.61
1395 1754 1.982395 CAGCGACCTCACCTGGGTA 60.982 63.158 0.00 0.00 37.17 3.69
2009 2380 4.276678 TCTTCAATCCGCATTCATTGGATC 59.723 41.667 0.00 0.00 41.58 3.36
2047 2418 2.630098 TGGAGTCCAGCAGTATCTATGC 59.370 50.000 8.12 0.00 44.18 3.14
2054 2430 4.141181 TCCAGCAGTATCTATGCCCATTTT 60.141 41.667 0.00 0.00 44.97 1.82
2055 2431 4.022589 CCAGCAGTATCTATGCCCATTTTG 60.023 45.833 0.00 0.00 44.97 2.44
2058 2434 4.320788 GCAGTATCTATGCCCATTTTGCTC 60.321 45.833 0.00 0.00 37.73 4.26
2082 2474 2.351418 TGGTTTTGATCGATCGTGATGC 59.649 45.455 20.03 8.14 0.00 3.91
2083 2475 2.351418 GGTTTTGATCGATCGTGATGCA 59.649 45.455 20.03 4.68 0.00 3.96
2285 2697 3.172575 CGATGCGCTGTCGTCGTT 61.173 61.111 21.90 0.00 39.78 3.85
2286 2698 1.866059 CGATGCGCTGTCGTCGTTA 60.866 57.895 21.90 0.00 39.78 3.18
2293 2705 0.109781 GCTGTCGTCGTTACCCGTTA 60.110 55.000 0.00 0.00 37.94 3.18
2295 2707 0.239879 TGTCGTCGTTACCCGTTACC 59.760 55.000 0.00 0.00 37.94 2.85
2318 2730 0.389025 AAAAAGGGCGAGCAACTTGG 59.611 50.000 5.31 0.00 0.00 3.61
2319 2731 2.087462 AAAAGGGCGAGCAACTTGGC 62.087 55.000 5.31 0.00 39.38 4.52
2320 2732 3.790416 AAGGGCGAGCAACTTGGCA 62.790 57.895 10.22 0.00 41.52 4.92
2321 2733 3.064324 GGGCGAGCAACTTGGCAT 61.064 61.111 10.22 0.00 41.52 4.40
2324 2736 2.180017 CGAGCAACTTGGCATGGC 59.820 61.111 13.29 13.29 35.83 4.40
2326 2738 2.282391 AGCAACTTGGCATGGCGA 60.282 55.556 15.27 12.23 35.83 5.54
2327 2739 2.126346 GCAACTTGGCATGGCGAC 60.126 61.111 15.27 0.00 0.00 5.19
2328 2740 2.176546 CAACTTGGCATGGCGACG 59.823 61.111 15.27 9.24 0.00 5.12
2329 2741 3.737172 AACTTGGCATGGCGACGC 61.737 61.111 12.43 12.43 0.00 5.19
2354 2766 4.692475 CCAACGGTGGGTCGGGTC 62.692 72.222 13.17 0.00 41.77 4.46
2416 2828 1.726672 CTGCACGCACGTACGTACA 60.727 57.895 22.34 13.80 46.34 2.90
2417 2829 1.726672 TGCACGCACGTACGTACAG 60.727 57.895 22.34 16.79 46.34 2.74
2430 2842 4.747108 CGTACGTACAGGTACAGCTATACT 59.253 45.833 24.50 0.00 42.25 2.12
2432 2844 6.420903 CGTACGTACAGGTACAGCTATACTAA 59.579 42.308 24.50 0.00 42.25 2.24
2444 2856 1.716581 CTATACTAAGCTGCGCTTCGC 59.283 52.381 16.96 8.98 46.77 4.70
2496 2912 0.673985 ACGCAGTGCTTACTCTGTCA 59.326 50.000 14.33 0.00 42.51 3.58
2497 2913 1.336332 ACGCAGTGCTTACTCTGTCAG 60.336 52.381 14.33 0.00 42.51 3.51
2498 2914 1.074752 GCAGTGCTTACTCTGTCAGC 58.925 55.000 8.18 0.00 39.18 4.26
2499 2915 1.719600 CAGTGCTTACTCTGTCAGCC 58.280 55.000 0.00 0.00 32.48 4.85
2500 2916 0.610687 AGTGCTTACTCTGTCAGCCC 59.389 55.000 0.00 0.00 32.48 5.19
2501 2917 0.610687 GTGCTTACTCTGTCAGCCCT 59.389 55.000 0.00 0.00 32.48 5.19
2502 2918 0.610174 TGCTTACTCTGTCAGCCCTG 59.390 55.000 0.00 0.00 32.48 4.45
2503 2919 0.898320 GCTTACTCTGTCAGCCCTGA 59.102 55.000 0.00 0.00 37.24 3.86
2504 2920 1.276421 GCTTACTCTGTCAGCCCTGAA 59.724 52.381 0.00 0.00 41.85 3.02
2505 2921 2.933056 GCTTACTCTGTCAGCCCTGAAC 60.933 54.545 0.00 0.00 41.85 3.18
2506 2922 2.310779 TACTCTGTCAGCCCTGAACT 57.689 50.000 0.00 0.00 41.85 3.01
2528 2944 0.902531 TACTCCTGTTGCTGGCTACC 59.097 55.000 4.92 0.00 0.00 3.18
2536 2952 0.324943 TTGCTGGCTACCCTGTCTTC 59.675 55.000 0.00 0.00 32.98 2.87
2539 2955 1.270907 CTGGCTACCCTGTCTTCTGT 58.729 55.000 0.00 0.00 0.00 3.41
2540 2956 1.625818 CTGGCTACCCTGTCTTCTGTT 59.374 52.381 0.00 0.00 0.00 3.16
2543 2959 3.649023 TGGCTACCCTGTCTTCTGTTAAA 59.351 43.478 0.00 0.00 0.00 1.52
2552 2968 6.094881 CCCTGTCTTCTGTTAAAACTGTTGAA 59.905 38.462 0.00 0.00 0.00 2.69
2560 2976 9.921637 TTCTGTTAAAACTGTTGAATTGTTCTT 57.078 25.926 0.00 0.00 0.00 2.52
2586 3027 6.263516 TGTCGTTCATACTTAGTGCTAACT 57.736 37.500 0.00 0.00 40.67 2.24
2606 3066 6.452494 AACTGCAGTCGTGATACTATTACT 57.548 37.500 21.95 0.00 0.00 2.24
2607 3067 5.822278 ACTGCAGTCGTGATACTATTACTG 58.178 41.667 15.25 0.00 37.87 2.74
2638 3098 3.060602 GCACTCTCAAGTTGACCAGTAC 58.939 50.000 0.08 0.00 31.71 2.73
2641 3101 3.704566 ACTCTCAAGTTGACCAGTACACA 59.295 43.478 0.08 0.00 28.74 3.72
2643 3103 3.069586 TCTCAAGTTGACCAGTACACAGG 59.930 47.826 0.08 0.00 0.00 4.00
2644 3104 1.873591 CAAGTTGACCAGTACACAGGC 59.126 52.381 0.00 0.00 0.00 4.85
2645 3105 1.128200 AGTTGACCAGTACACAGGCA 58.872 50.000 0.00 0.00 0.00 4.75
2646 3106 1.202651 AGTTGACCAGTACACAGGCAC 60.203 52.381 0.00 0.00 0.00 5.01
2647 3107 0.833949 TTGACCAGTACACAGGCACA 59.166 50.000 0.00 0.00 0.00 4.57
2648 3108 0.833949 TGACCAGTACACAGGCACAA 59.166 50.000 0.00 0.00 0.00 3.33
2649 3109 1.202639 TGACCAGTACACAGGCACAAG 60.203 52.381 0.00 0.00 0.00 3.16
2650 3110 0.108585 ACCAGTACACAGGCACAAGG 59.891 55.000 0.00 0.00 0.00 3.61
2651 3111 1.237285 CCAGTACACAGGCACAAGGC 61.237 60.000 0.00 0.00 43.74 4.35
2662 3122 2.846039 GCACAAGGCATGATCTCAAG 57.154 50.000 0.00 0.00 43.97 3.02
2663 3123 2.089980 GCACAAGGCATGATCTCAAGT 58.910 47.619 0.00 0.00 43.97 3.16
2697 3157 2.744202 CCATGTTCGGCTTATATCTGCC 59.256 50.000 8.40 8.40 45.25 4.85
2699 3159 1.765904 TGTTCGGCTTATATCTGCCCA 59.234 47.619 11.77 3.73 45.90 5.36
2737 3197 5.411831 TCTATATGCATCCATCTGTCACC 57.588 43.478 0.19 0.00 32.85 4.02
2738 3198 5.089434 TCTATATGCATCCATCTGTCACCT 58.911 41.667 0.19 0.00 32.85 4.00
2750 3210 2.159421 TCTGTCACCTCGATCGCTTTAC 60.159 50.000 11.09 5.44 0.00 2.01
2755 3215 0.529992 CCTCGATCGCTTTACCACCC 60.530 60.000 11.09 0.00 0.00 4.61
2776 3236 2.028883 CGCTTTACAGTTAACGGCTAGC 59.971 50.000 6.04 6.04 0.00 3.42
2779 3239 4.491676 CTTTACAGTTAACGGCTAGCTCA 58.508 43.478 15.72 0.00 0.00 4.26
2780 3240 4.524316 TTACAGTTAACGGCTAGCTCAA 57.476 40.909 15.72 0.82 0.00 3.02
2781 3241 3.396260 ACAGTTAACGGCTAGCTCAAA 57.604 42.857 15.72 1.56 0.00 2.69
2783 3243 4.324267 ACAGTTAACGGCTAGCTCAAAAT 58.676 39.130 15.72 0.96 0.00 1.82
2784 3244 4.154195 ACAGTTAACGGCTAGCTCAAAATG 59.846 41.667 15.72 14.66 0.00 2.32
2785 3245 3.127030 AGTTAACGGCTAGCTCAAAATGC 59.873 43.478 15.72 0.00 0.00 3.56
2787 3247 1.755179 ACGGCTAGCTCAAAATGCAT 58.245 45.000 15.72 0.00 0.00 3.96
2788 3248 2.094675 ACGGCTAGCTCAAAATGCATT 58.905 42.857 15.72 5.99 0.00 3.56
2792 3281 3.379372 GGCTAGCTCAAAATGCATTCTCA 59.621 43.478 13.38 0.00 0.00 3.27
2797 3286 7.703621 GCTAGCTCAAAATGCATTCTCATTTAA 59.296 33.333 13.38 0.00 43.56 1.52
2801 3290 7.279313 GCTCAAAATGCATTCTCATTTAATGGT 59.721 33.333 13.38 0.00 43.56 3.55
2804 3293 8.385111 CAAAATGCATTCTCATTTAATGGTCAC 58.615 33.333 13.38 0.00 43.56 3.67
2808 3297 6.542005 TGCATTCTCATTTAATGGTCACGTAT 59.458 34.615 5.02 0.00 35.34 3.06
2810 3299 5.984233 TCTCATTTAATGGTCACGTATGC 57.016 39.130 5.02 0.00 0.00 3.14
2826 3315 2.984871 TGCGTACGTATGCATGCAT 58.015 47.368 32.99 33.92 42.78 3.96
2830 3319 2.219903 GCGTACGTATGCATGCATGTTA 59.780 45.455 37.43 23.46 38.10 2.41
2865 3358 4.260907 CCGTATCTGAATCTTGCCATGTTG 60.261 45.833 0.00 0.00 0.00 3.33
2882 3375 1.295915 TTGGCCCTTATCCAGCCCAT 61.296 55.000 0.00 0.00 46.55 4.00
2892 3385 1.818419 TCCAGCCCATCATATGACCA 58.182 50.000 7.78 0.00 0.00 4.02
3088 3737 6.428465 CAGCTAGCTTCATGAGATTGATTGAT 59.572 38.462 16.46 0.00 0.00 2.57
3119 3768 2.260247 GCATCACTGCTCTTTGCCA 58.740 52.632 0.00 0.00 45.32 4.92
3139 3788 1.675552 AAAACAGACTTGGGTCACCG 58.324 50.000 0.00 0.00 44.36 4.94
3150 3799 0.323087 GGGTCACCGGGCTACAAAAT 60.323 55.000 6.32 0.00 0.00 1.82
3163 3812 5.393962 GGCTACAAAATTGTGTTGAGCTAG 58.606 41.667 18.66 6.55 42.31 3.42
3167 3816 6.259550 ACAAAATTGTGTTGAGCTAGGATC 57.740 37.500 0.00 0.00 40.49 3.36
3171 3820 3.717400 TGTGTTGAGCTAGGATCGATC 57.283 47.619 17.36 17.36 0.00 3.69
3172 3821 2.033424 TGTGTTGAGCTAGGATCGATCG 59.967 50.000 18.81 9.36 0.00 3.69
3173 3822 2.290916 GTGTTGAGCTAGGATCGATCGA 59.709 50.000 21.86 21.86 0.00 3.59
3174 3823 2.290916 TGTTGAGCTAGGATCGATCGAC 59.709 50.000 22.06 14.00 33.04 4.20
3176 3825 2.572290 TGAGCTAGGATCGATCGACAA 58.428 47.619 22.06 5.18 0.00 3.18
3177 3826 3.149981 TGAGCTAGGATCGATCGACAAT 58.850 45.455 22.06 11.32 0.00 2.71
3179 3828 3.149981 AGCTAGGATCGATCGACAATCA 58.850 45.455 22.06 4.07 33.65 2.57
3180 3829 3.761218 AGCTAGGATCGATCGACAATCAT 59.239 43.478 22.06 14.48 33.65 2.45
3181 3830 3.856521 GCTAGGATCGATCGACAATCATG 59.143 47.826 22.06 8.75 33.65 3.07
3183 3832 2.036346 AGGATCGATCGACAATCATGCA 59.964 45.455 22.06 0.00 33.65 3.96
3188 3837 1.524355 GATCGACAATCATGCACTCCG 59.476 52.381 0.00 0.00 34.26 4.63
3316 4050 6.708949 AGAAGATGAGTAGTAGTAGTAGCAGC 59.291 42.308 0.00 0.00 0.00 5.25
3317 4051 5.931294 AGATGAGTAGTAGTAGTAGCAGCA 58.069 41.667 0.00 0.00 0.00 4.41
3318 4052 5.995282 AGATGAGTAGTAGTAGTAGCAGCAG 59.005 44.000 0.00 0.00 0.00 4.24
3429 4167 9.616634 TGTAGTAACTTGTAAGTACGATTTCAG 57.383 33.333 0.00 0.00 38.57 3.02
3430 4168 9.831737 GTAGTAACTTGTAAGTACGATTTCAGA 57.168 33.333 0.00 0.00 38.57 3.27
3432 4170 9.924650 AGTAACTTGTAAGTACGATTTCAGAAT 57.075 29.630 0.00 0.00 38.57 2.40
3475 4213 2.490509 ACGATCACCAACAGACATCGTA 59.509 45.455 3.56 0.00 45.78 3.43
3536 4274 3.451141 TGCGTTGCAAATTTTCTTCCT 57.549 38.095 0.00 0.00 34.76 3.36
3539 4277 3.059166 CGTTGCAAATTTTCTTCCTGGG 58.941 45.455 0.00 0.00 0.00 4.45
3564 4303 2.734079 GCTGTGTTCTGCTACTCTGTTC 59.266 50.000 0.00 0.00 35.98 3.18
3581 4324 1.001624 TTCGAATCTCTGCATGTGCG 58.998 50.000 0.00 0.00 45.83 5.34
3605 4348 2.044946 CTGCTAGCCCACCCAACC 60.045 66.667 13.29 0.00 0.00 3.77
3606 4349 3.976701 CTGCTAGCCCACCCAACCG 62.977 68.421 13.29 0.00 0.00 4.44
3607 4350 3.712907 GCTAGCCCACCCAACCGA 61.713 66.667 2.29 0.00 0.00 4.69
3646 4389 2.660552 AACCGACGTTGCTGACCG 60.661 61.111 0.00 0.00 0.00 4.79
3668 4411 2.860293 GTTGATCGTGCGTGTGGG 59.140 61.111 0.00 0.00 0.00 4.61
3795 4541 2.930019 CAGGAGGTGGTGCTGGGA 60.930 66.667 0.00 0.00 40.89 4.37
3996 4748 3.376935 CTCCAACGGCGCCTCATCT 62.377 63.158 26.68 0.23 0.00 2.90
4115 4915 0.038159 GAGGTGTGGGACGTCAAGAG 60.038 60.000 18.91 0.00 38.99 2.85
4118 4918 0.391597 GTGTGGGACGTCAAGAGGAA 59.608 55.000 18.91 0.00 0.00 3.36
4146 4946 2.362503 ATCCTCGACTCCGGCACA 60.363 61.111 0.00 0.00 36.24 4.57
4270 5077 3.229156 TACAACTGGACGGCCACGG 62.229 63.158 5.41 0.00 46.48 4.94
4516 5325 7.696453 GTCGCTGTGCACAGTAATTAATTATTT 59.304 33.333 39.30 1.01 45.45 1.40
4517 5326 8.884726 TCGCTGTGCACAGTAATTAATTATTTA 58.115 29.630 39.30 12.08 45.45 1.40
4518 5327 9.663904 CGCTGTGCACAGTAATTAATTATTTAT 57.336 29.630 39.30 0.00 45.45 1.40
4545 5354 5.043248 GCAGCTCTCTAGTCATTTCTTCTC 58.957 45.833 0.00 0.00 0.00 2.87
4547 5356 6.035843 CAGCTCTCTAGTCATTTCTTCTCAC 58.964 44.000 0.00 0.00 0.00 3.51
4551 5360 6.489603 TCTCTAGTCATTTCTTCTCACTCCT 58.510 40.000 0.00 0.00 0.00 3.69
4553 5362 7.122055 TCTCTAGTCATTTCTTCTCACTCCTTC 59.878 40.741 0.00 0.00 0.00 3.46
4555 5364 4.019771 AGTCATTTCTTCTCACTCCTTCCC 60.020 45.833 0.00 0.00 0.00 3.97
4556 5365 4.019771 GTCATTTCTTCTCACTCCTTCCCT 60.020 45.833 0.00 0.00 0.00 4.20
4557 5366 4.599241 TCATTTCTTCTCACTCCTTCCCTT 59.401 41.667 0.00 0.00 0.00 3.95
4558 5367 4.625607 TTTCTTCTCACTCCTTCCCTTC 57.374 45.455 0.00 0.00 0.00 3.46
4559 5368 3.551635 TCTTCTCACTCCTTCCCTTCT 57.448 47.619 0.00 0.00 0.00 2.85
4560 5369 3.436243 TCTTCTCACTCCTTCCCTTCTC 58.564 50.000 0.00 0.00 0.00 2.87
4561 5370 1.840737 TCTCACTCCTTCCCTTCTCG 58.159 55.000 0.00 0.00 0.00 4.04
4562 5371 1.075698 TCTCACTCCTTCCCTTCTCGT 59.924 52.381 0.00 0.00 0.00 4.18
4593 5402 2.295253 CGTAAGGGTCTCGCTGATTT 57.705 50.000 0.00 0.00 0.00 2.17
4646 5455 9.123902 TGTTAATGAAATGTGGGATGAAGATAG 57.876 33.333 0.00 0.00 0.00 2.08
4647 5456 9.125026 GTTAATGAAATGTGGGATGAAGATAGT 57.875 33.333 0.00 0.00 0.00 2.12
4650 5459 9.512588 AATGAAATGTGGGATGAAGATAGTATC 57.487 33.333 1.55 1.55 0.00 2.24
4651 5460 8.267620 TGAAATGTGGGATGAAGATAGTATCT 57.732 34.615 6.86 6.86 42.61 1.98
4652 5461 8.152898 TGAAATGTGGGATGAAGATAGTATCTG 58.847 37.037 13.47 0.00 40.13 2.90
4653 5462 7.862274 AATGTGGGATGAAGATAGTATCTGA 57.138 36.000 13.47 4.22 40.13 3.27
4654 5463 7.862274 ATGTGGGATGAAGATAGTATCTGAA 57.138 36.000 13.47 5.57 40.13 3.02
4655 5464 7.295322 TGTGGGATGAAGATAGTATCTGAAG 57.705 40.000 13.47 0.00 40.13 3.02
4656 5465 6.841229 TGTGGGATGAAGATAGTATCTGAAGT 59.159 38.462 13.47 0.00 40.13 3.01
4657 5466 7.345653 TGTGGGATGAAGATAGTATCTGAAGTT 59.654 37.037 13.47 0.00 40.13 2.66
4668 5477 9.424319 GATAGTATCTGAAGTTGTTGAAACAGA 57.576 33.333 2.69 0.00 40.50 3.41
4698 5507 5.049680 GCAAGTTTCTGACACGGATCTTTTA 60.050 40.000 0.00 0.00 0.00 1.52
4699 5508 6.363473 CAAGTTTCTGACACGGATCTTTTAC 58.637 40.000 0.00 0.00 0.00 2.01
4700 5509 5.855045 AGTTTCTGACACGGATCTTTTACT 58.145 37.500 0.00 0.00 0.00 2.24
4705 5514 6.931838 TCTGACACGGATCTTTTACTACAAT 58.068 36.000 0.00 0.00 0.00 2.71
4759 5568 9.695155 TCTAACAAAATAAAGATCCCCCTTAAG 57.305 33.333 0.00 0.00 0.00 1.85
4778 5867 6.295916 CCTTAAGGCCTCGAATGGTATTCTAT 60.296 42.308 5.23 0.00 0.00 1.98
4792 5881 8.697507 ATGGTATTCTATCCTTGTTTGATTCC 57.302 34.615 0.00 0.00 0.00 3.01
4793 5882 7.872138 TGGTATTCTATCCTTGTTTGATTCCT 58.128 34.615 0.00 0.00 0.00 3.36
4794 5883 8.336235 TGGTATTCTATCCTTGTTTGATTCCTT 58.664 33.333 0.00 0.00 0.00 3.36
4799 5905 7.338710 TCTATCCTTGTTTGATTCCTTGGTAG 58.661 38.462 0.00 0.00 0.00 3.18
4929 6331 2.025605 TGATACTCCCACTACGACCAGT 60.026 50.000 0.00 0.00 0.00 4.00
4931 6333 0.611340 ACTCCCACTACGACCAGTCC 60.611 60.000 0.00 0.00 0.00 3.85
5153 6750 7.502226 AGAGAGTAGAGACCAGAGACAATATTG 59.498 40.741 14.01 14.01 0.00 1.90
5457 7056 5.301805 TGCTCATGTTCCGATCTATGTTCTA 59.698 40.000 0.00 0.00 0.00 2.10
5483 7082 9.780186 ATGATCACTTAATTAGTTAGTTAGGGC 57.220 33.333 0.00 0.00 33.85 5.19
5484 7083 8.764558 TGATCACTTAATTAGTTAGTTAGGGCA 58.235 33.333 0.00 0.00 33.85 5.36
5485 7084 9.780186 GATCACTTAATTAGTTAGTTAGGGCAT 57.220 33.333 0.00 0.00 33.85 4.40
5487 7086 9.609346 TCACTTAATTAGTTAGTTAGGGCATTC 57.391 33.333 0.00 0.00 33.85 2.67
5488 7087 9.614792 CACTTAATTAGTTAGTTAGGGCATTCT 57.385 33.333 0.00 0.00 33.85 2.40
5505 7104 5.169836 CATTCTAATGCCGACCCTTAAAC 57.830 43.478 0.00 0.00 0.00 2.01
5506 7105 3.271055 TCTAATGCCGACCCTTAAACC 57.729 47.619 0.00 0.00 0.00 3.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 7.820872 TGGTCTACTTTAGTAAGGATTTTTCCG 59.179 37.037 0.00 0.00 35.61 4.30
135 461 3.342269 CGTTGCACGTAGTCATTAATGC 58.658 45.455 10.76 6.21 41.61 3.56
138 464 1.727880 GCCGTTGCACGTAGTCATTAA 59.272 47.619 7.68 0.00 41.61 1.40
177 504 1.020437 GAGGCTGCAAGATGGTAAGC 58.980 55.000 0.50 0.00 34.07 3.09
178 505 2.286872 CAGAGGCTGCAAGATGGTAAG 58.713 52.381 0.50 0.00 34.07 2.34
190 517 7.280876 TCAAGTAAACTATTATTGCAGAGGCTG 59.719 37.037 0.00 0.00 41.91 4.85
295 645 3.029320 TGCTTGCAAATTAGGCAACAG 57.971 42.857 12.04 6.41 45.57 3.16
334 684 6.970484 AGTATGGTTCTGTGATTTGTGAAAC 58.030 36.000 0.00 0.00 37.35 2.78
359 709 4.134563 CACCTATATTTTGGAACGGAGGG 58.865 47.826 0.00 0.00 0.00 4.30
361 711 8.365647 ACTATACACCTATATTTTGGAACGGAG 58.634 37.037 0.00 0.00 0.00 4.63
377 727 9.541884 AATTTCCATACCAAAAACTATACACCT 57.458 29.630 0.00 0.00 0.00 4.00
392 742 7.759433 CCATGTGTGTTCTTTAATTTCCATACC 59.241 37.037 0.00 0.00 0.00 2.73
393 743 8.519526 TCCATGTGTGTTCTTTAATTTCCATAC 58.480 33.333 0.00 0.00 0.00 2.39
394 744 8.642935 TCCATGTGTGTTCTTTAATTTCCATA 57.357 30.769 0.00 0.00 0.00 2.74
396 746 6.015519 CCTCCATGTGTGTTCTTTAATTTCCA 60.016 38.462 0.00 0.00 0.00 3.53
397 747 6.389906 CCTCCATGTGTGTTCTTTAATTTCC 58.610 40.000 0.00 0.00 0.00 3.13
398 748 6.208599 TCCCTCCATGTGTGTTCTTTAATTTC 59.791 38.462 0.00 0.00 0.00 2.17
399 749 6.074648 TCCCTCCATGTGTGTTCTTTAATTT 58.925 36.000 0.00 0.00 0.00 1.82
400 750 5.640147 TCCCTCCATGTGTGTTCTTTAATT 58.360 37.500 0.00 0.00 0.00 1.40
404 754 3.593442 TTCCCTCCATGTGTGTTCTTT 57.407 42.857 0.00 0.00 0.00 2.52
405 755 3.593442 TTTCCCTCCATGTGTGTTCTT 57.407 42.857 0.00 0.00 0.00 2.52
406 756 3.593442 TTTTCCCTCCATGTGTGTTCT 57.407 42.857 0.00 0.00 0.00 3.01
407 757 4.871933 AATTTTCCCTCCATGTGTGTTC 57.128 40.909 0.00 0.00 0.00 3.18
408 758 4.653341 TGAAATTTTCCCTCCATGTGTGTT 59.347 37.500 6.68 0.00 0.00 3.32
409 759 4.039124 GTGAAATTTTCCCTCCATGTGTGT 59.961 41.667 6.68 0.00 0.00 3.72
410 760 4.039004 TGTGAAATTTTCCCTCCATGTGTG 59.961 41.667 6.68 0.00 0.00 3.82
411 761 4.222336 TGTGAAATTTTCCCTCCATGTGT 58.778 39.130 6.68 0.00 0.00 3.72
412 762 4.870123 TGTGAAATTTTCCCTCCATGTG 57.130 40.909 6.68 0.00 0.00 3.21
415 765 6.499106 AAACTTGTGAAATTTTCCCTCCAT 57.501 33.333 6.68 0.00 0.00 3.41
416 766 5.948742 AAACTTGTGAAATTTTCCCTCCA 57.051 34.783 6.68 0.00 0.00 3.86
417 767 5.527214 CCAAAACTTGTGAAATTTTCCCTCC 59.473 40.000 6.68 0.00 0.00 4.30
418 768 5.527214 CCCAAAACTTGTGAAATTTTCCCTC 59.473 40.000 6.68 0.00 0.00 4.30
420 770 4.036262 GCCCAAAACTTGTGAAATTTTCCC 59.964 41.667 6.68 0.00 0.00 3.97
421 771 4.260579 CGCCCAAAACTTGTGAAATTTTCC 60.261 41.667 6.68 0.00 0.00 3.13
422 772 4.568760 TCGCCCAAAACTTGTGAAATTTTC 59.431 37.500 2.05 2.05 0.00 2.29
424 774 4.119136 CTCGCCCAAAACTTGTGAAATTT 58.881 39.130 0.00 0.00 0.00 1.82
425 775 3.383185 TCTCGCCCAAAACTTGTGAAATT 59.617 39.130 0.00 0.00 0.00 1.82
426 776 2.955660 TCTCGCCCAAAACTTGTGAAAT 59.044 40.909 0.00 0.00 0.00 2.17
427 777 2.370349 TCTCGCCCAAAACTTGTGAAA 58.630 42.857 0.00 0.00 0.00 2.69
428 778 2.045561 TCTCGCCCAAAACTTGTGAA 57.954 45.000 0.00 0.00 0.00 3.18
429 779 2.270352 ATCTCGCCCAAAACTTGTGA 57.730 45.000 0.00 0.00 0.00 3.58
430 780 3.369546 AAATCTCGCCCAAAACTTGTG 57.630 42.857 0.00 0.00 0.00 3.33
432 782 4.234574 GGTAAAATCTCGCCCAAAACTTG 58.765 43.478 0.00 0.00 0.00 3.16
433 783 3.892588 TGGTAAAATCTCGCCCAAAACTT 59.107 39.130 0.00 0.00 0.00 2.66
434 784 3.492337 TGGTAAAATCTCGCCCAAAACT 58.508 40.909 0.00 0.00 0.00 2.66
435 785 3.504520 TCTGGTAAAATCTCGCCCAAAAC 59.495 43.478 0.00 0.00 0.00 2.43
436 786 3.504520 GTCTGGTAAAATCTCGCCCAAAA 59.495 43.478 0.00 0.00 0.00 2.44
437 787 3.078837 GTCTGGTAAAATCTCGCCCAAA 58.921 45.455 0.00 0.00 0.00 3.28
438 788 2.304761 AGTCTGGTAAAATCTCGCCCAA 59.695 45.455 0.00 0.00 0.00 4.12
439 789 1.906574 AGTCTGGTAAAATCTCGCCCA 59.093 47.619 0.00 0.00 0.00 5.36
440 790 2.693267 AGTCTGGTAAAATCTCGCCC 57.307 50.000 0.00 0.00 0.00 6.13
441 791 5.815740 TCAATTAGTCTGGTAAAATCTCGCC 59.184 40.000 0.00 0.00 0.00 5.54
442 792 6.312918 TGTCAATTAGTCTGGTAAAATCTCGC 59.687 38.462 0.00 0.00 0.00 5.03
443 793 7.827819 TGTCAATTAGTCTGGTAAAATCTCG 57.172 36.000 0.00 0.00 0.00 4.04
444 794 9.383519 TCATGTCAATTAGTCTGGTAAAATCTC 57.616 33.333 0.00 0.00 0.00 2.75
445 795 9.388506 CTCATGTCAATTAGTCTGGTAAAATCT 57.611 33.333 0.00 0.00 0.00 2.40
446 796 9.383519 TCTCATGTCAATTAGTCTGGTAAAATC 57.616 33.333 0.00 0.00 0.00 2.17
447 797 9.739276 TTCTCATGTCAATTAGTCTGGTAAAAT 57.261 29.630 0.00 0.00 0.00 1.82
448 798 9.567776 TTTCTCATGTCAATTAGTCTGGTAAAA 57.432 29.630 0.00 0.00 0.00 1.52
449 799 9.567776 TTTTCTCATGTCAATTAGTCTGGTAAA 57.432 29.630 0.00 0.00 0.00 2.01
450 800 9.739276 ATTTTCTCATGTCAATTAGTCTGGTAA 57.261 29.630 0.00 0.00 0.00 2.85
452 802 9.388506 CTATTTTCTCATGTCAATTAGTCTGGT 57.611 33.333 0.00 0.00 0.00 4.00
453 803 9.605275 TCTATTTTCTCATGTCAATTAGTCTGG 57.395 33.333 0.00 0.00 0.00 3.86
455 805 9.829507 CCTCTATTTTCTCATGTCAATTAGTCT 57.170 33.333 0.00 0.00 0.00 3.24
456 806 9.823647 TCCTCTATTTTCTCATGTCAATTAGTC 57.176 33.333 0.00 0.00 0.00 2.59
457 807 9.829507 CTCCTCTATTTTCTCATGTCAATTAGT 57.170 33.333 0.00 0.00 0.00 2.24
458 808 8.772705 GCTCCTCTATTTTCTCATGTCAATTAG 58.227 37.037 0.00 0.00 0.00 1.73
459 809 8.489489 AGCTCCTCTATTTTCTCATGTCAATTA 58.511 33.333 0.00 0.00 0.00 1.40
460 810 7.344913 AGCTCCTCTATTTTCTCATGTCAATT 58.655 34.615 0.00 0.00 0.00 2.32
461 811 6.897986 AGCTCCTCTATTTTCTCATGTCAAT 58.102 36.000 0.00 0.00 0.00 2.57
462 812 6.305272 AGCTCCTCTATTTTCTCATGTCAA 57.695 37.500 0.00 0.00 0.00 3.18
463 813 5.946942 AGCTCCTCTATTTTCTCATGTCA 57.053 39.130 0.00 0.00 0.00 3.58
464 814 5.007528 GCAAGCTCCTCTATTTTCTCATGTC 59.992 44.000 0.00 0.00 0.00 3.06
465 815 4.880696 GCAAGCTCCTCTATTTTCTCATGT 59.119 41.667 0.00 0.00 0.00 3.21
466 816 4.275443 GGCAAGCTCCTCTATTTTCTCATG 59.725 45.833 0.00 0.00 0.00 3.07
467 817 4.165758 AGGCAAGCTCCTCTATTTTCTCAT 59.834 41.667 0.00 0.00 0.00 2.90
468 818 3.521126 AGGCAAGCTCCTCTATTTTCTCA 59.479 43.478 0.00 0.00 0.00 3.27
469 819 3.876320 CAGGCAAGCTCCTCTATTTTCTC 59.124 47.826 0.00 0.00 33.25 2.87
470 820 3.521126 TCAGGCAAGCTCCTCTATTTTCT 59.479 43.478 0.00 0.00 33.25 2.52
471 821 3.878778 TCAGGCAAGCTCCTCTATTTTC 58.121 45.455 0.00 0.00 33.25 2.29
472 822 4.516652 ATCAGGCAAGCTCCTCTATTTT 57.483 40.909 0.00 0.00 33.25 1.82
473 823 5.839517 ATATCAGGCAAGCTCCTCTATTT 57.160 39.130 0.00 0.00 33.25 1.40
474 824 6.070309 CCTTATATCAGGCAAGCTCCTCTATT 60.070 42.308 0.00 0.00 33.25 1.73
475 825 5.424895 CCTTATATCAGGCAAGCTCCTCTAT 59.575 44.000 0.00 0.00 33.25 1.98
476 826 4.774726 CCTTATATCAGGCAAGCTCCTCTA 59.225 45.833 0.00 0.00 33.25 2.43
477 827 3.582208 CCTTATATCAGGCAAGCTCCTCT 59.418 47.826 0.00 0.00 33.25 3.69
478 828 3.580458 TCCTTATATCAGGCAAGCTCCTC 59.420 47.826 0.00 0.00 33.25 3.71
479 829 3.591789 TCCTTATATCAGGCAAGCTCCT 58.408 45.455 0.00 0.00 36.78 3.69
480 830 4.357918 TTCCTTATATCAGGCAAGCTCC 57.642 45.455 0.00 0.00 33.35 4.70
481 831 6.237154 AGATTTCCTTATATCAGGCAAGCTC 58.763 40.000 0.89 0.00 31.04 4.09
482 832 6.198237 AGATTTCCTTATATCAGGCAAGCT 57.802 37.500 0.89 0.89 31.80 3.74
483 833 7.986085 TTAGATTTCCTTATATCAGGCAAGC 57.014 36.000 0.00 0.00 33.35 4.01
484 834 9.730705 TGATTAGATTTCCTTATATCAGGCAAG 57.269 33.333 0.00 0.00 33.35 4.01
520 870 4.142491 TGCATCGCTCGTTTGGATATTTTT 60.142 37.500 0.00 0.00 0.00 1.94
521 871 3.376859 TGCATCGCTCGTTTGGATATTTT 59.623 39.130 0.00 0.00 0.00 1.82
522 872 2.942376 TGCATCGCTCGTTTGGATATTT 59.058 40.909 0.00 0.00 0.00 1.40
523 873 2.560504 TGCATCGCTCGTTTGGATATT 58.439 42.857 0.00 0.00 0.00 1.28
524 874 2.238942 TGCATCGCTCGTTTGGATAT 57.761 45.000 0.00 0.00 0.00 1.63
525 875 1.663643 GTTGCATCGCTCGTTTGGATA 59.336 47.619 0.00 0.00 0.00 2.59
526 876 0.447801 GTTGCATCGCTCGTTTGGAT 59.552 50.000 0.00 0.00 0.00 3.41
527 877 1.866237 GTTGCATCGCTCGTTTGGA 59.134 52.632 0.00 0.00 0.00 3.53
528 878 1.509787 CGTTGCATCGCTCGTTTGG 60.510 57.895 3.94 0.00 0.00 3.28
529 879 4.026156 CGTTGCATCGCTCGTTTG 57.974 55.556 3.94 0.00 0.00 2.93
537 887 0.726827 AGGTGTATTGCGTTGCATCG 59.273 50.000 12.78 12.78 38.76 3.84
538 888 2.919666 AAGGTGTATTGCGTTGCATC 57.080 45.000 0.00 0.00 38.76 3.91
539 889 6.633500 AATATAAGGTGTATTGCGTTGCAT 57.367 33.333 0.00 0.00 38.76 3.96
540 890 6.094186 TGAAATATAAGGTGTATTGCGTTGCA 59.906 34.615 0.00 0.00 36.47 4.08
541 891 6.491394 TGAAATATAAGGTGTATTGCGTTGC 58.509 36.000 0.00 0.00 0.00 4.17
542 892 7.915508 TCTGAAATATAAGGTGTATTGCGTTG 58.084 34.615 0.00 0.00 0.00 4.10
543 893 8.677148 ATCTGAAATATAAGGTGTATTGCGTT 57.323 30.769 0.00 0.00 0.00 4.84
544 894 8.677148 AATCTGAAATATAAGGTGTATTGCGT 57.323 30.769 0.00 0.00 0.00 5.24
545 895 9.950680 AAAATCTGAAATATAAGGTGTATTGCG 57.049 29.630 0.00 0.00 0.00 4.85
582 932 8.693625 GCGTTCCTTAATATAGGGTGTATAGAT 58.306 37.037 0.00 0.00 35.90 1.98
583 933 7.670979 TGCGTTCCTTAATATAGGGTGTATAGA 59.329 37.037 0.00 0.00 35.90 1.98
584 934 7.833786 TGCGTTCCTTAATATAGGGTGTATAG 58.166 38.462 0.00 0.00 35.90 1.31
585 935 7.093640 CCTGCGTTCCTTAATATAGGGTGTATA 60.094 40.741 0.00 0.00 35.90 1.47
586 936 6.295688 CCTGCGTTCCTTAATATAGGGTGTAT 60.296 42.308 0.00 0.00 35.90 2.29
587 937 5.011329 CCTGCGTTCCTTAATATAGGGTGTA 59.989 44.000 0.00 0.00 35.90 2.90
588 938 4.202326 CCTGCGTTCCTTAATATAGGGTGT 60.202 45.833 0.00 0.00 35.90 4.16
589 939 4.315803 CCTGCGTTCCTTAATATAGGGTG 58.684 47.826 0.00 0.00 35.90 4.61
590 940 3.326880 CCCTGCGTTCCTTAATATAGGGT 59.673 47.826 0.00 0.00 38.99 4.34
591 941 3.581332 TCCCTGCGTTCCTTAATATAGGG 59.419 47.826 0.00 0.00 43.94 3.53
592 942 4.283722 ACTCCCTGCGTTCCTTAATATAGG 59.716 45.833 0.00 0.00 36.59 2.57
593 943 5.470047 ACTCCCTGCGTTCCTTAATATAG 57.530 43.478 0.00 0.00 0.00 1.31
594 944 6.982160 TTACTCCCTGCGTTCCTTAATATA 57.018 37.500 0.00 0.00 0.00 0.86
595 945 5.881923 TTACTCCCTGCGTTCCTTAATAT 57.118 39.130 0.00 0.00 0.00 1.28
596 946 5.881923 ATTACTCCCTGCGTTCCTTAATA 57.118 39.130 0.00 0.00 0.00 0.98
597 947 4.772886 ATTACTCCCTGCGTTCCTTAAT 57.227 40.909 0.00 0.00 0.00 1.40
598 948 5.881923 ATATTACTCCCTGCGTTCCTTAA 57.118 39.130 0.00 0.00 0.00 1.85
599 949 5.881923 AATATTACTCCCTGCGTTCCTTA 57.118 39.130 0.00 0.00 0.00 2.69
600 950 4.772886 AATATTACTCCCTGCGTTCCTT 57.227 40.909 0.00 0.00 0.00 3.36
601 951 4.772886 AAATATTACTCCCTGCGTTCCT 57.227 40.909 0.00 0.00 0.00 3.36
602 952 5.995897 ACATAAATATTACTCCCTGCGTTCC 59.004 40.000 0.00 0.00 0.00 3.62
603 953 6.565999 GCACATAAATATTACTCCCTGCGTTC 60.566 42.308 0.00 0.00 0.00 3.95
604 954 5.238650 GCACATAAATATTACTCCCTGCGTT 59.761 40.000 0.00 0.00 0.00 4.84
605 955 4.755123 GCACATAAATATTACTCCCTGCGT 59.245 41.667 0.00 0.00 0.00 5.24
606 956 4.754618 TGCACATAAATATTACTCCCTGCG 59.245 41.667 0.00 0.00 0.00 5.18
607 957 6.633500 TTGCACATAAATATTACTCCCTGC 57.367 37.500 0.00 0.00 0.00 4.85
608 958 8.849168 TGAATTGCACATAAATATTACTCCCTG 58.151 33.333 0.00 0.00 0.00 4.45
609 959 8.850156 GTGAATTGCACATAAATATTACTCCCT 58.150 33.333 0.00 0.00 46.91 4.20
631 981 4.224147 TGCTATGTGCTTAACTAGGGTGAA 59.776 41.667 0.00 0.00 43.37 3.18
640 990 6.756074 TGCCAAAATAATGCTATGTGCTTAAC 59.244 34.615 0.00 0.00 43.37 2.01
668 1018 5.416271 AATTAGGCAACCGGACGATATAT 57.584 39.130 9.46 0.00 37.17 0.86
669 1019 4.616604 CGAATTAGGCAACCGGACGATATA 60.617 45.833 9.46 0.00 37.17 0.86
711 1061 1.109920 AGCGGTGTGTCAGTCAGAGT 61.110 55.000 0.00 0.00 0.00 3.24
944 1294 1.449070 CAATGGCGAGCTGAGCAGA 60.449 57.895 7.39 0.00 36.08 4.26
963 1313 3.883744 AAGCTGCTTCACCGGACGG 62.884 63.158 9.46 9.56 42.03 4.79
1199 1549 4.680237 TTGACGACGCCAGCCTGG 62.680 66.667 6.32 6.32 41.55 4.45
1200 1550 3.114616 CTTGACGACGCCAGCCTG 61.115 66.667 0.00 0.00 0.00 4.85
1672 2036 2.668212 GCACTTACTGCGCACCCA 60.668 61.111 5.66 0.00 35.72 4.51
2009 2380 1.140852 TCCACAGTGGAGTTGGTGAAG 59.859 52.381 19.21 0.00 42.67 3.02
2047 2418 3.321682 TCAAAACCAGAGAGCAAAATGGG 59.678 43.478 3.52 0.00 37.13 4.00
2054 2430 3.525537 GATCGATCAAAACCAGAGAGCA 58.474 45.455 20.52 0.00 0.00 4.26
2055 2431 2.537625 CGATCGATCAAAACCAGAGAGC 59.462 50.000 24.40 0.00 0.00 4.09
2058 2434 3.511699 TCACGATCGATCAAAACCAGAG 58.488 45.455 24.34 7.78 0.00 3.35
2082 2474 2.125753 GGCTCGGAGACTGTGCTG 60.126 66.667 9.69 0.00 0.00 4.41
2083 2475 3.386237 GGGCTCGGAGACTGTGCT 61.386 66.667 11.32 0.00 0.00 4.40
2304 2716 3.064324 ATGCCAAGTTGCTCGCCC 61.064 61.111 0.00 0.00 0.00 6.13
2307 2719 2.180017 GCCATGCCAAGTTGCTCG 59.820 61.111 0.00 0.00 0.00 5.03
2309 2721 2.282391 TCGCCATGCCAAGTTGCT 60.282 55.556 0.00 0.00 0.00 3.91
2310 2722 2.126346 GTCGCCATGCCAAGTTGC 60.126 61.111 0.00 0.00 0.00 4.17
2311 2723 2.176546 CGTCGCCATGCCAAGTTG 59.823 61.111 0.00 0.00 0.00 3.16
2312 2724 3.737172 GCGTCGCCATGCCAAGTT 61.737 61.111 5.75 0.00 0.00 2.66
2405 2817 1.466167 AGCTGTACCTGTACGTACGTG 59.534 52.381 30.25 16.00 41.30 4.49
2440 2852 0.182537 AATCATCATTCCCCGGCGAA 59.817 50.000 9.30 3.56 0.00 4.70
2441 2853 1.052617 TAATCATCATTCCCCGGCGA 58.947 50.000 9.30 0.00 0.00 5.54
2444 2856 6.265196 TCTGAATTTTAATCATCATTCCCCGG 59.735 38.462 0.00 0.00 0.00 5.73
2445 2857 7.229306 TCTCTGAATTTTAATCATCATTCCCCG 59.771 37.037 0.00 0.00 0.00 5.73
2446 2858 8.469309 TCTCTGAATTTTAATCATCATTCCCC 57.531 34.615 0.00 0.00 0.00 4.81
2450 2862 9.294030 GCGTTTCTCTGAATTTTAATCATCATT 57.706 29.630 0.00 0.00 0.00 2.57
2451 2863 8.461222 TGCGTTTCTCTGAATTTTAATCATCAT 58.539 29.630 0.00 0.00 0.00 2.45
2452 2864 7.750458 GTGCGTTTCTCTGAATTTTAATCATCA 59.250 33.333 0.00 0.00 0.00 3.07
2485 2897 2.564947 AGTTCAGGGCTGACAGAGTAAG 59.435 50.000 6.65 0.00 39.66 2.34
2496 2912 2.043252 ACAGGAGTAGTAGTTCAGGGCT 59.957 50.000 0.00 0.00 0.00 5.19
2497 2913 2.458620 ACAGGAGTAGTAGTTCAGGGC 58.541 52.381 0.00 0.00 0.00 5.19
2498 2914 3.368531 GCAACAGGAGTAGTAGTTCAGGG 60.369 52.174 0.00 0.00 0.00 4.45
2499 2915 3.511934 AGCAACAGGAGTAGTAGTTCAGG 59.488 47.826 0.00 0.00 0.00 3.86
2500 2916 4.489810 CAGCAACAGGAGTAGTAGTTCAG 58.510 47.826 0.00 0.00 0.00 3.02
2501 2917 3.258372 CCAGCAACAGGAGTAGTAGTTCA 59.742 47.826 0.00 0.00 0.00 3.18
2502 2918 3.851098 CCAGCAACAGGAGTAGTAGTTC 58.149 50.000 0.00 0.00 0.00 3.01
2503 2919 2.028020 GCCAGCAACAGGAGTAGTAGTT 60.028 50.000 0.00 0.00 0.00 2.24
2504 2920 1.550976 GCCAGCAACAGGAGTAGTAGT 59.449 52.381 0.00 0.00 0.00 2.73
2505 2921 1.827969 AGCCAGCAACAGGAGTAGTAG 59.172 52.381 0.00 0.00 0.00 2.57
2506 2922 1.938585 AGCCAGCAACAGGAGTAGTA 58.061 50.000 0.00 0.00 0.00 1.82
2528 2944 6.677781 TCAACAGTTTTAACAGAAGACAGG 57.322 37.500 0.00 0.00 0.00 4.00
2536 2952 8.807581 GGAAGAACAATTCAACAGTTTTAACAG 58.192 33.333 0.00 0.00 0.00 3.16
2539 2955 8.527810 ACAGGAAGAACAATTCAACAGTTTTAA 58.472 29.630 0.00 0.00 0.00 1.52
2540 2956 8.062065 ACAGGAAGAACAATTCAACAGTTTTA 57.938 30.769 0.00 0.00 0.00 1.52
2543 2959 5.220854 CGACAGGAAGAACAATTCAACAGTT 60.221 40.000 0.00 0.00 0.00 3.16
2552 2968 5.794894 AGTATGAACGACAGGAAGAACAAT 58.205 37.500 0.00 0.00 0.00 2.71
2560 2976 3.762288 AGCACTAAGTATGAACGACAGGA 59.238 43.478 0.00 0.00 0.00 3.86
2615 3075 0.249868 TGGTCAACTTGAGAGTGCCG 60.250 55.000 0.00 0.00 35.91 5.69
2616 3076 1.202698 ACTGGTCAACTTGAGAGTGCC 60.203 52.381 0.00 0.00 35.91 5.01
2621 3081 3.069586 CCTGTGTACTGGTCAACTTGAGA 59.930 47.826 0.00 0.00 0.00 3.27
2638 3098 0.454600 GATCATGCCTTGTGCCTGTG 59.545 55.000 0.00 0.00 40.16 3.66
2641 3101 0.622136 TGAGATCATGCCTTGTGCCT 59.378 50.000 0.00 0.00 40.16 4.75
2643 3103 2.089980 ACTTGAGATCATGCCTTGTGC 58.910 47.619 0.00 0.00 41.77 4.57
2644 3104 4.008330 AGAACTTGAGATCATGCCTTGTG 58.992 43.478 0.00 0.00 0.00 3.33
2645 3105 4.008330 CAGAACTTGAGATCATGCCTTGT 58.992 43.478 0.00 0.00 0.00 3.16
2646 3106 4.259356 TCAGAACTTGAGATCATGCCTTG 58.741 43.478 0.00 0.00 0.00 3.61
2647 3107 4.564782 TCAGAACTTGAGATCATGCCTT 57.435 40.909 0.00 0.00 0.00 4.35
2648 3108 4.260170 GTTCAGAACTTGAGATCATGCCT 58.740 43.478 6.00 0.00 37.07 4.75
2649 3109 3.376546 GGTTCAGAACTTGAGATCATGCC 59.623 47.826 13.13 0.00 37.07 4.40
2650 3110 4.260170 AGGTTCAGAACTTGAGATCATGC 58.740 43.478 13.13 0.00 37.07 4.06
2651 3111 6.609533 CAAAGGTTCAGAACTTGAGATCATG 58.390 40.000 13.13 0.00 37.07 3.07
2652 3112 5.182760 GCAAAGGTTCAGAACTTGAGATCAT 59.817 40.000 16.00 0.00 37.07 2.45
2653 3113 4.516698 GCAAAGGTTCAGAACTTGAGATCA 59.483 41.667 16.00 0.00 37.07 2.92
2654 3114 4.083057 GGCAAAGGTTCAGAACTTGAGATC 60.083 45.833 16.00 0.00 37.07 2.75
2655 3115 3.823304 GGCAAAGGTTCAGAACTTGAGAT 59.177 43.478 16.00 0.00 37.07 2.75
2656 3116 3.214328 GGCAAAGGTTCAGAACTTGAGA 58.786 45.455 16.00 0.00 37.07 3.27
2657 3117 2.951642 TGGCAAAGGTTCAGAACTTGAG 59.048 45.455 16.00 6.31 37.07 3.02
2658 3118 3.011566 TGGCAAAGGTTCAGAACTTGA 57.988 42.857 16.00 0.00 0.00 3.02
2659 3119 3.068590 ACATGGCAAAGGTTCAGAACTTG 59.931 43.478 13.13 11.26 0.00 3.16
2660 3120 3.299503 ACATGGCAAAGGTTCAGAACTT 58.700 40.909 13.13 2.30 0.00 2.66
2661 3121 2.949447 ACATGGCAAAGGTTCAGAACT 58.051 42.857 13.13 0.00 0.00 3.01
2662 3122 3.642705 GAACATGGCAAAGGTTCAGAAC 58.357 45.455 18.97 4.52 40.39 3.01
2663 3123 2.293122 CGAACATGGCAAAGGTTCAGAA 59.707 45.455 21.73 0.00 40.62 3.02
2687 3147 4.402155 CCAAAAGCTTGTGGGCAGATATAA 59.598 41.667 26.01 0.00 34.17 0.98
2688 3148 3.953612 CCAAAAGCTTGTGGGCAGATATA 59.046 43.478 26.01 0.00 34.17 0.86
2689 3149 2.762327 CCAAAAGCTTGTGGGCAGATAT 59.238 45.455 26.01 0.00 34.17 1.63
2690 3150 2.170166 CCAAAAGCTTGTGGGCAGATA 58.830 47.619 26.01 0.00 34.17 1.98
2691 3151 0.971386 CCAAAAGCTTGTGGGCAGAT 59.029 50.000 26.01 0.00 34.17 2.90
2692 3152 1.747325 GCCAAAAGCTTGTGGGCAGA 61.747 55.000 32.40 0.00 44.01 4.26
2693 3153 1.301165 GCCAAAAGCTTGTGGGCAG 60.301 57.895 32.40 11.44 44.01 4.85
2694 3154 2.820973 GCCAAAAGCTTGTGGGCA 59.179 55.556 32.40 0.00 44.01 5.36
2712 3172 7.401204 AGGTGACAGATGGATGCATATAGAATA 59.599 37.037 0.00 0.00 0.00 1.75
2714 3174 5.545335 AGGTGACAGATGGATGCATATAGAA 59.455 40.000 0.00 0.00 0.00 2.10
2715 3175 5.089434 AGGTGACAGATGGATGCATATAGA 58.911 41.667 0.00 0.00 0.00 1.98
2716 3176 5.417754 AGGTGACAGATGGATGCATATAG 57.582 43.478 0.00 0.00 0.00 1.31
2718 3178 3.306571 CGAGGTGACAGATGGATGCATAT 60.307 47.826 0.00 0.00 0.00 1.78
2720 3180 1.202615 CGAGGTGACAGATGGATGCAT 60.203 52.381 0.00 0.00 0.00 3.96
2722 3182 0.461548 TCGAGGTGACAGATGGATGC 59.538 55.000 0.00 0.00 0.00 3.91
2737 3197 0.870307 CGGGTGGTAAAGCGATCGAG 60.870 60.000 21.57 0.00 0.00 4.04
2738 3198 1.140161 CGGGTGGTAAAGCGATCGA 59.860 57.895 21.57 0.00 0.00 3.59
2750 3210 1.461897 CGTTAACTGTAAAGCGGGTGG 59.538 52.381 3.71 0.00 0.00 4.61
2755 3215 2.028883 GCTAGCCGTTAACTGTAAAGCG 59.971 50.000 2.29 0.00 0.00 4.68
2776 3236 8.712285 ACCATTAAATGAGAATGCATTTTGAG 57.288 30.769 14.33 0.00 43.83 3.02
2779 3239 7.276218 CGTGACCATTAAATGAGAATGCATTTT 59.724 33.333 14.33 7.96 43.83 1.82
2780 3240 6.753279 CGTGACCATTAAATGAGAATGCATTT 59.247 34.615 14.33 3.59 46.79 2.32
2781 3241 6.127647 ACGTGACCATTAAATGAGAATGCATT 60.128 34.615 12.83 12.83 40.04 3.56
2783 3243 4.699735 ACGTGACCATTAAATGAGAATGCA 59.300 37.500 0.00 0.00 33.70 3.96
2784 3244 5.235305 ACGTGACCATTAAATGAGAATGC 57.765 39.130 0.00 0.00 33.70 3.56
2785 3245 6.852853 GCATACGTGACCATTAAATGAGAATG 59.147 38.462 0.00 0.00 34.63 2.67
2787 3247 5.006261 CGCATACGTGACCATTAAATGAGAA 59.994 40.000 0.00 0.00 33.53 2.87
2788 3248 4.506288 CGCATACGTGACCATTAAATGAGA 59.494 41.667 0.00 0.00 33.53 3.27
2804 3293 6.944892 CATGCATGCATACGTACGCATACG 62.945 50.000 31.73 17.23 46.87 3.06
2808 3297 0.581053 CATGCATGCATACGTACGCA 59.419 50.000 31.73 19.51 43.45 5.24
2810 3299 3.121025 CCTAACATGCATGCATACGTACG 60.121 47.826 31.73 20.40 34.91 3.67
2812 3301 4.329462 TCCTAACATGCATGCATACGTA 57.671 40.909 31.73 20.99 34.91 3.57
2813 3302 3.192541 TCCTAACATGCATGCATACGT 57.807 42.857 31.73 23.18 34.91 3.57
2814 3303 3.181527 CGATCCTAACATGCATGCATACG 60.182 47.826 31.73 22.52 34.91 3.06
2816 3305 3.996363 GTCGATCCTAACATGCATGCATA 59.004 43.478 31.73 16.51 34.91 3.14
2817 3306 2.810274 GTCGATCCTAACATGCATGCAT 59.190 45.455 27.46 27.46 37.08 3.96
2819 3308 1.193203 CGTCGATCCTAACATGCATGC 59.807 52.381 26.53 11.82 0.00 4.06
2820 3309 1.193203 GCGTCGATCCTAACATGCATG 59.807 52.381 25.09 25.09 0.00 4.06
2826 3315 2.103538 GGCGCGTCGATCCTAACA 59.896 61.111 8.43 0.00 0.00 2.41
2830 3319 3.251318 GATACGGCGCGTCGATCCT 62.251 63.158 41.68 20.49 41.54 3.24
2865 3358 1.075659 GATGGGCTGGATAAGGGCC 59.924 63.158 0.00 0.00 46.56 5.80
2882 3375 3.566351 AGATCGGTGACTGGTCATATGA 58.434 45.455 7.52 0.00 42.18 2.15
2892 3385 2.616376 CTGAAGATCGAGATCGGTGACT 59.384 50.000 7.37 0.00 42.48 3.41
2930 3423 4.270325 GCATCGGACCTACTTGTGTTAATC 59.730 45.833 0.00 0.00 0.00 1.75
2990 3483 6.469595 GCTAGAACAGAGTACGTTTGTCTATG 59.530 42.308 0.00 0.00 0.00 2.23
2991 3484 6.404513 GGCTAGAACAGAGTACGTTTGTCTAT 60.405 42.308 0.00 0.00 0.00 1.98
3088 3737 3.559655 GCAGTGATGCACCAATACGAATA 59.440 43.478 0.00 0.00 34.49 1.75
3110 3759 4.114794 CCAAGTCTGTTTTTGGCAAAGAG 58.885 43.478 13.04 10.41 37.61 2.85
3119 3768 2.021457 CGGTGACCCAAGTCTGTTTTT 58.979 47.619 0.00 0.00 43.91 1.94
3139 3788 3.005791 AGCTCAACACAATTTTGTAGCCC 59.994 43.478 13.41 0.00 39.91 5.19
3150 3799 3.489229 CGATCGATCCTAGCTCAACACAA 60.489 47.826 19.51 0.00 0.00 3.33
3163 3812 2.156504 GTGCATGATTGTCGATCGATCC 59.843 50.000 22.50 10.03 37.60 3.36
3167 3816 1.524355 GGAGTGCATGATTGTCGATCG 59.476 52.381 9.36 9.36 37.60 3.69
3171 3820 1.349627 GCGGAGTGCATGATTGTCG 59.650 57.895 0.00 0.00 45.45 4.35
3181 3830 0.531200 ACCTAAGTACAGCGGAGTGC 59.469 55.000 0.00 0.00 46.98 4.40
3183 3832 1.272313 TGGACCTAAGTACAGCGGAGT 60.272 52.381 0.00 0.00 29.22 3.85
3291 4025 6.708949 GCTGCTACTACTACTACTCATCTTCT 59.291 42.308 0.00 0.00 0.00 2.85
3429 4167 6.321181 TGGGCCTAATGTGTTTATCTGAATTC 59.679 38.462 4.53 0.00 0.00 2.17
3430 4168 6.096846 GTGGGCCTAATGTGTTTATCTGAATT 59.903 38.462 4.53 0.00 0.00 2.17
3431 4169 5.594317 GTGGGCCTAATGTGTTTATCTGAAT 59.406 40.000 4.53 0.00 0.00 2.57
3432 4170 4.947388 GTGGGCCTAATGTGTTTATCTGAA 59.053 41.667 4.53 0.00 0.00 3.02
3475 4213 0.603569 CCACTCCAGCTAGAACACGT 59.396 55.000 0.00 0.00 0.00 4.49
3536 4274 2.591429 CAGAACACAGCGCACCCA 60.591 61.111 11.47 0.00 0.00 4.51
3539 4277 0.946221 AGTAGCAGAACACAGCGCAC 60.946 55.000 11.47 0.00 35.48 5.34
3564 4303 0.807275 TCCGCACATGCAGAGATTCG 60.807 55.000 4.49 0.00 42.21 3.34
3581 4324 1.377333 GTGGGCTAGCAGTTGGTCC 60.377 63.158 18.24 7.02 31.53 4.46
3605 4348 4.697514 ACAGTTGGTTAGGATCATCATCG 58.302 43.478 0.00 0.00 0.00 3.84
3606 4349 5.674525 TGACAGTTGGTTAGGATCATCATC 58.325 41.667 0.00 0.00 0.00 2.92
3607 4350 5.698741 TGACAGTTGGTTAGGATCATCAT 57.301 39.130 0.00 0.00 0.00 2.45
3646 4389 1.076533 ACACGCACGATCAACGATCC 61.077 55.000 6.08 0.00 45.77 3.36
3668 4411 2.548480 GAGTTGTCCTTGTACCTGCAAC 59.452 50.000 0.00 0.00 37.18 4.17
3795 4541 1.898154 GTCGTAGGAGGTGGTGCAT 59.102 57.895 0.00 0.00 0.00 3.96
4025 4825 3.697747 CGTAGAACGGGGCCACCA 61.698 66.667 4.39 0.00 40.22 4.17
4146 4946 2.586792 GCGAGGATGGTGAGGCTT 59.413 61.111 0.00 0.00 0.00 4.35
4332 5141 0.892358 TGACGTAGCTCTTGGTCGGT 60.892 55.000 0.00 0.00 32.17 4.69
4516 5325 6.780031 AGAAATGACTAGAGAGCTGCCTAATA 59.220 38.462 0.00 0.00 0.00 0.98
4517 5326 5.602145 AGAAATGACTAGAGAGCTGCCTAAT 59.398 40.000 0.00 0.00 0.00 1.73
4518 5327 4.959210 AGAAATGACTAGAGAGCTGCCTAA 59.041 41.667 0.00 0.00 0.00 2.69
4519 5328 4.541705 AGAAATGACTAGAGAGCTGCCTA 58.458 43.478 0.00 0.00 0.00 3.93
4527 5336 6.489603 AGGAGTGAGAAGAAATGACTAGAGA 58.510 40.000 0.00 0.00 0.00 3.10
4528 5337 6.773976 AGGAGTGAGAAGAAATGACTAGAG 57.226 41.667 0.00 0.00 0.00 2.43
4529 5338 6.153680 GGAAGGAGTGAGAAGAAATGACTAGA 59.846 42.308 0.00 0.00 0.00 2.43
4545 5354 1.402984 CGAACGAGAAGGGAAGGAGTG 60.403 57.143 0.00 0.00 0.00 3.51
4547 5356 0.889306 ACGAACGAGAAGGGAAGGAG 59.111 55.000 0.14 0.00 0.00 3.69
4551 5360 3.387397 GAAAGAACGAACGAGAAGGGAA 58.613 45.455 0.14 0.00 0.00 3.97
4553 5362 2.067013 GGAAAGAACGAACGAGAAGGG 58.933 52.381 0.14 0.00 0.00 3.95
4555 5364 1.719780 CGGGAAAGAACGAACGAGAAG 59.280 52.381 0.14 0.00 0.00 2.85
4556 5365 1.067516 ACGGGAAAGAACGAACGAGAA 59.932 47.619 0.14 0.00 0.00 2.87
4557 5366 0.670162 ACGGGAAAGAACGAACGAGA 59.330 50.000 0.14 0.00 0.00 4.04
4558 5367 2.336554 TACGGGAAAGAACGAACGAG 57.663 50.000 0.14 0.00 0.00 4.18
4559 5368 2.607771 CCTTACGGGAAAGAACGAACGA 60.608 50.000 0.14 0.00 37.23 3.85
4560 5369 1.723003 CCTTACGGGAAAGAACGAACG 59.277 52.381 0.00 0.00 37.23 3.95
4593 5402 6.237901 TGCTTATGAAGAAAGAGCCTTACAA 58.762 36.000 0.00 0.00 32.53 2.41
4648 5457 9.903682 CATTATTCTGTTTCAACAACTTCAGAT 57.096 29.630 0.00 0.00 38.66 2.90
4649 5458 7.862372 GCATTATTCTGTTTCAACAACTTCAGA 59.138 33.333 0.00 0.00 38.66 3.27
4650 5459 7.648908 TGCATTATTCTGTTTCAACAACTTCAG 59.351 33.333 0.00 0.00 38.66 3.02
4651 5460 7.487484 TGCATTATTCTGTTTCAACAACTTCA 58.513 30.769 0.00 0.00 38.66 3.02
4652 5461 7.928908 TGCATTATTCTGTTTCAACAACTTC 57.071 32.000 0.00 0.00 38.66 3.01
4653 5462 7.981225 ACTTGCATTATTCTGTTTCAACAACTT 59.019 29.630 0.00 0.00 38.66 2.66
4654 5463 7.491682 ACTTGCATTATTCTGTTTCAACAACT 58.508 30.769 0.00 0.00 38.66 3.16
4655 5464 7.698836 ACTTGCATTATTCTGTTTCAACAAC 57.301 32.000 0.00 0.00 38.66 3.32
4656 5465 8.715191 AAACTTGCATTATTCTGTTTCAACAA 57.285 26.923 0.00 0.00 38.66 2.83
4657 5466 8.196771 AGAAACTTGCATTATTCTGTTTCAACA 58.803 29.630 15.53 0.00 42.99 3.33
4668 5477 4.759693 TCCGTGTCAGAAACTTGCATTATT 59.240 37.500 0.00 0.00 0.00 1.40
4698 5507 8.997621 ACGTATGTTTAGTGAATCATTGTAGT 57.002 30.769 0.00 0.00 0.00 2.73
4705 5514 7.604927 AGCCTTTTACGTATGTTTAGTGAATCA 59.395 33.333 0.00 0.00 0.00 2.57
4747 5556 0.763223 TCGAGGCCTTAAGGGGGATC 60.763 60.000 23.06 5.61 35.18 3.36
4759 5568 3.515901 AGGATAGAATACCATTCGAGGCC 59.484 47.826 0.00 0.00 0.00 5.19
4827 5933 8.419076 TCGTGTATAAGACATTGTACGTAGTA 57.581 34.615 0.00 0.00 40.96 1.82
4833 5939 8.684973 AAAGTCTCGTGTATAAGACATTGTAC 57.315 34.615 5.42 0.00 43.52 2.90
4929 6331 8.736097 TCTTTATGGGATTTGTATAGCTAGGA 57.264 34.615 0.00 0.00 0.00 2.94
4966 6368 4.498513 CCCATCACATGAATCAATGGTTCG 60.499 45.833 0.00 0.00 36.04 3.95
5153 6750 5.133221 AGGTGACATATATTCCACAAAGGC 58.867 41.667 13.31 0.00 37.29 4.35
5457 7056 9.780186 GCCCTAACTAACTAATTAAGTGATCAT 57.220 33.333 0.00 0.00 38.88 2.45
5483 7082 4.036380 GGTTTAAGGGTCGGCATTAGAATG 59.964 45.833 0.00 0.00 39.40 2.67
5484 7083 4.204799 GGTTTAAGGGTCGGCATTAGAAT 58.795 43.478 0.00 0.00 0.00 2.40
5485 7084 3.613030 GGTTTAAGGGTCGGCATTAGAA 58.387 45.455 0.00 0.00 0.00 2.10
5486 7085 3.271055 GGTTTAAGGGTCGGCATTAGA 57.729 47.619 0.00 0.00 0.00 2.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.