Multiple sequence alignment - TraesCS1D01G392500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS1D01G392500 chr1D 100.000 4988 0 0 1 4988 462474437 462479424 0.000000e+00 9212
1 TraesCS1D01G392500 chr1D 86.628 172 21 2 2317 2487 347410317 347410147 6.590000e-44 189
2 TraesCS1D01G392500 chr1B 96.193 1760 66 1 1711 3469 637593252 637595011 0.000000e+00 2878
3 TraesCS1D01G392500 chr1B 88.064 687 40 19 800 1467 637592552 637593215 0.000000e+00 776
4 TraesCS1D01G392500 chr1B 85.961 463 46 7 3735 4197 637595014 637595457 1.260000e-130 477
5 TraesCS1D01G392500 chr1B 78.988 652 91 26 4354 4988 637595531 637596153 2.160000e-108 403
6 TraesCS1D01G392500 chr1B 91.743 218 11 6 1 217 637591772 637591983 3.780000e-76 296
7 TraesCS1D01G392500 chr1B 85.057 261 27 6 504 756 637592170 637592426 6.410000e-64 255
8 TraesCS1D01G392500 chr1B 82.803 157 22 4 1512 1665 510811015 510811169 8.710000e-28 135
9 TraesCS1D01G392500 chr1B 81.633 147 22 3 1519 1663 500605497 500605640 3.150000e-22 117
10 TraesCS1D01G392500 chr1B 77.540 187 34 6 1515 1696 553893192 553893009 6.830000e-19 106
11 TraesCS1D01G392500 chr1A 96.239 1755 64 2 1711 3463 554305167 554306921 0.000000e+00 2874
12 TraesCS1D01G392500 chr1A 88.168 1479 95 35 1 1429 554303265 554304713 0.000000e+00 1688
13 TraesCS1D01G392500 chr1A 82.321 560 92 7 2577 3133 448034988 448034433 3.490000e-131 479
14 TraesCS1D01G392500 chr1A 82.957 487 50 22 3770 4241 554306956 554307424 4.650000e-110 409
15 TraesCS1D01G392500 chr1A 87.209 172 20 2 2317 2487 448035385 448035215 1.420000e-45 195
16 TraesCS1D01G392500 chr2A 92.321 1745 134 0 1716 3460 765016777 765018521 0.000000e+00 2481
17 TraesCS1D01G392500 chr2A 86.667 330 32 4 1132 1449 765016300 765016629 6.140000e-94 355
18 TraesCS1D01G392500 chr2A 84.314 357 40 9 3747 4088 765018537 765018892 8.000000e-88 335
19 TraesCS1D01G392500 chr2D 92.039 1746 139 0 1716 3461 639627826 639629571 0.000000e+00 2455
20 TraesCS1D01G392500 chr2D 89.965 289 22 5 1148 1429 639627353 639627641 2.840000e-97 366
21 TraesCS1D01G392500 chr2D 86.824 296 26 9 3747 4029 639629587 639629882 8.060000e-83 318
22 TraesCS1D01G392500 chr2B 92.034 1745 139 0 1716 3460 798631554 798629810 0.000000e+00 2453
23 TraesCS1D01G392500 chr2B 88.509 322 33 4 1132 1449 798632064 798631743 2.180000e-103 387
24 TraesCS1D01G392500 chr2B 84.831 356 42 6 3747 4091 798629794 798629440 1.030000e-91 348
25 TraesCS1D01G392500 chr2B 88.550 262 24 4 3465 3723 166592115 166592373 3.750000e-81 313
26 TraesCS1D01G392500 chr2B 82.888 187 21 7 4397 4576 798632490 798632308 1.860000e-34 158
27 TraesCS1D01G392500 chr2B 81.646 158 23 4 1513 1670 71316830 71316679 5.240000e-25 126
28 TraesCS1D01G392500 chr2B 78.610 187 27 9 1503 1686 719440724 719440900 1.470000e-20 111
29 TraesCS1D01G392500 chr7B 88.973 263 23 4 3464 3723 598296144 598296403 2.240000e-83 320
30 TraesCS1D01G392500 chr7B 79.444 180 30 5 1512 1686 77429439 77429616 2.440000e-23 121
31 TraesCS1D01G392500 chr5B 88.973 263 23 4 3464 3723 8022949 8022690 2.240000e-83 320
32 TraesCS1D01G392500 chr7A 89.189 259 22 4 3467 3723 707496350 707496096 8.060000e-83 318
33 TraesCS1D01G392500 chr7A 83.088 136 18 3 1516 1651 676361431 676361561 8.770000e-23 119
34 TraesCS1D01G392500 chr3D 89.683 252 22 2 3464 3714 62813597 62813845 8.060000e-83 318
35 TraesCS1D01G392500 chr7D 88.346 266 25 4 3461 3723 454944183 454943921 1.040000e-81 315
36 TraesCS1D01G392500 chr7D 86.786 280 28 6 3464 3739 465691394 465691668 2.260000e-78 303
37 TraesCS1D01G392500 chr4B 88.593 263 24 3 3464 3723 398088496 398088755 1.040000e-81 315
38 TraesCS1D01G392500 chr5D 88.213 263 25 4 3464 3723 85566772 85567031 4.850000e-80 309
39 TraesCS1D01G392500 chr5D 80.203 197 25 5 1519 1702 462454799 462454604 8.710000e-28 135
40 TraesCS1D01G392500 chr4A 85.714 133 18 1 1520 1651 319821329 319821461 6.730000e-29 139


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS1D01G392500 chr1D 462474437 462479424 4987 False 9212.000000 9212 100.000000 1 4988 1 chr1D.!!$F1 4987
1 TraesCS1D01G392500 chr1B 637591772 637596153 4381 False 847.500000 2878 87.667667 1 4988 6 chr1B.!!$F3 4987
2 TraesCS1D01G392500 chr1A 554303265 554307424 4159 False 1657.000000 2874 89.121333 1 4241 3 chr1A.!!$F1 4240
3 TraesCS1D01G392500 chr1A 448034433 448035385 952 True 337.000000 479 84.765000 2317 3133 2 chr1A.!!$R1 816
4 TraesCS1D01G392500 chr2A 765016300 765018892 2592 False 1057.000000 2481 87.767333 1132 4088 3 chr2A.!!$F1 2956
5 TraesCS1D01G392500 chr2D 639627353 639629882 2529 False 1046.333333 2455 89.609333 1148 4029 3 chr2D.!!$F1 2881
6 TraesCS1D01G392500 chr2B 798629440 798632490 3050 True 836.500000 2453 87.065500 1132 4576 4 chr2B.!!$R2 3444

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
927 1175 0.320374 TGAGCTTTCACCTGTACCCG 59.680 55.0 0.00 0.00 0.00 5.28 F
1429 1697 0.179029 AAAACCTCTCCACCACGGTG 60.179 55.0 9.36 9.36 45.02 4.94 F
1470 1933 0.532417 CTCTGGCTGCCTATGTCTGC 60.532 60.0 21.03 0.00 0.00 4.26 F
2324 3046 0.687354 AGACCGTCACCAAGCAGATT 59.313 50.0 0.40 0.00 0.00 2.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2586 3444 1.137513 GTCGTCGGGTCAAACTTGAG 58.862 55.000 0.00 0.0 37.98 3.02 R
3167 4025 2.592308 CTCCCCTTGCCTACCTGC 59.408 66.667 0.00 0.0 0.00 4.85 R
3713 4571 0.180406 ACTGTCTGCACCCTTCGTTT 59.820 50.000 0.00 0.0 0.00 3.60 R
4572 5492 0.037697 AGTATGCGCCACTTCGACAA 60.038 50.000 4.18 0.0 0.00 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
102 105 0.613260 AGGTGACTGTGTGTGTGTGT 59.387 50.000 0.00 0.00 41.13 3.72
308 422 2.526888 ACCAACCGAGAGATGACCTA 57.473 50.000 0.00 0.00 0.00 3.08
311 425 3.056035 ACCAACCGAGAGATGACCTAAAC 60.056 47.826 0.00 0.00 0.00 2.01
313 427 3.103080 ACCGAGAGATGACCTAAACCT 57.897 47.619 0.00 0.00 0.00 3.50
318 432 6.156429 ACCGAGAGATGACCTAAACCTTAATT 59.844 38.462 0.00 0.00 0.00 1.40
321 435 8.195436 CGAGAGATGACCTAAACCTTAATTACA 58.805 37.037 0.00 0.00 0.00 2.41
410 524 1.627879 ATGCTATTTTGCGCAAACGG 58.372 45.000 33.73 24.75 39.89 4.44
411 525 0.387878 TGCTATTTTGCGCAAACGGG 60.388 50.000 33.73 24.43 40.57 5.28
432 546 7.558604 ACGGGTAATAGTGCTTTTCAATAGTA 58.441 34.615 0.00 0.00 0.00 1.82
445 559 9.237846 GCTTTTCAATAGTAACATTTGATAGGC 57.762 33.333 0.00 0.00 30.78 3.93
449 563 8.902540 TCAATAGTAACATTTGATAGGCGAAT 57.097 30.769 0.00 0.00 0.00 3.34
495 609 9.936759 TTCAGTGTGTACATATTCTGATTTACA 57.063 29.630 11.90 0.00 33.10 2.41
528 659 2.461110 AAAATGACTAGCCCGCGCG 61.461 57.895 25.67 25.67 41.18 6.86
547 678 2.498167 CGGATGAAGGGATTGATGACC 58.502 52.381 0.00 0.00 0.00 4.02
570 701 1.684049 CTCCCTCGTGGCTCTTCCT 60.684 63.158 0.00 0.00 35.26 3.36
575 706 1.228894 TCGTGGCTCTTCCTGGTCT 60.229 57.895 0.00 0.00 35.26 3.85
577 708 0.390472 CGTGGCTCTTCCTGGTCTTC 60.390 60.000 0.00 0.00 35.26 2.87
578 709 0.980423 GTGGCTCTTCCTGGTCTTCT 59.020 55.000 0.00 0.00 35.26 2.85
579 710 1.349357 GTGGCTCTTCCTGGTCTTCTT 59.651 52.381 0.00 0.00 35.26 2.52
580 711 1.625818 TGGCTCTTCCTGGTCTTCTTC 59.374 52.381 0.00 0.00 35.26 2.87
589 720 2.299297 CCTGGTCTTCTTCTGTAACGGT 59.701 50.000 0.00 0.00 0.00 4.83
616 752 5.720261 AAAGAGAGTGAAAGTTTGACGTC 57.280 39.130 9.11 9.11 0.00 4.34
657 794 3.650647 ACAACATGTGATTCCCGCT 57.349 47.368 0.00 0.00 0.00 5.52
691 828 2.202797 CACAGTCCCGATCGGCAG 60.203 66.667 29.12 16.22 0.00 4.85
791 1031 1.001633 AGTCCAATACCGTCGCTTGTT 59.998 47.619 0.00 0.00 0.00 2.83
793 1033 2.995258 GTCCAATACCGTCGCTTGTTTA 59.005 45.455 0.00 0.00 0.00 2.01
803 1043 6.311723 ACCGTCGCTTGTTTAGAAAAATATG 58.688 36.000 0.00 0.00 0.00 1.78
824 1064 4.928398 CGGAGCTGTGCTTGAGAT 57.072 55.556 0.00 0.00 39.88 2.75
825 1065 3.149899 CGGAGCTGTGCTTGAGATT 57.850 52.632 0.00 0.00 39.88 2.40
833 1077 4.155462 AGCTGTGCTTGAGATTACAACATG 59.845 41.667 0.00 0.00 33.89 3.21
863 1107 3.560636 TTTAATCAGCAGCTCCTACCC 57.439 47.619 0.00 0.00 0.00 3.69
893 1141 1.018840 TCATCTTCTCCTCCCTCCCA 58.981 55.000 0.00 0.00 0.00 4.37
927 1175 0.320374 TGAGCTTTCACCTGTACCCG 59.680 55.000 0.00 0.00 0.00 5.28
933 1181 2.536761 TTCACCTGTACCCGAAACAG 57.463 50.000 5.18 5.18 43.26 3.16
938 1186 2.370849 ACCTGTACCCGAAACAGTTCAT 59.629 45.455 9.79 0.00 42.30 2.57
939 1187 3.000727 CCTGTACCCGAAACAGTTCATC 58.999 50.000 9.79 0.00 42.30 2.92
940 1188 3.556213 CCTGTACCCGAAACAGTTCATCA 60.556 47.826 9.79 0.00 42.30 3.07
1235 1503 3.576982 ACGGGGTGATTATGATGTCGTAT 59.423 43.478 0.00 0.00 0.00 3.06
1358 1626 1.022735 GAAGATCGACTACTCCGGCA 58.977 55.000 0.00 0.00 0.00 5.69
1429 1697 0.179029 AAAACCTCTCCACCACGGTG 60.179 55.000 9.36 9.36 45.02 4.94
1431 1699 4.742201 CCTCTCCACCACGGTGCG 62.742 72.222 10.89 4.70 44.16 5.34
1449 1912 3.506455 GTGCGTATATTCTCCTCCAGCTA 59.494 47.826 0.00 0.00 0.00 3.32
1450 1913 4.158764 GTGCGTATATTCTCCTCCAGCTAT 59.841 45.833 0.00 0.00 0.00 2.97
1451 1914 4.399618 TGCGTATATTCTCCTCCAGCTATC 59.600 45.833 0.00 0.00 0.00 2.08
1452 1915 4.642885 GCGTATATTCTCCTCCAGCTATCT 59.357 45.833 0.00 0.00 0.00 1.98
1465 1928 1.901159 AGCTATCTCTGGCTGCCTATG 59.099 52.381 21.03 10.15 37.87 2.23
1467 1930 2.353605 GCTATCTCTGGCTGCCTATGTC 60.354 54.545 21.03 0.00 0.00 3.06
1469 1932 1.117994 TCTCTGGCTGCCTATGTCTG 58.882 55.000 21.03 3.45 0.00 3.51
1470 1933 0.532417 CTCTGGCTGCCTATGTCTGC 60.532 60.000 21.03 0.00 0.00 4.26
1496 1959 5.464389 TGATCGTCTGATTGATAACAGCATG 59.536 40.000 0.00 0.00 37.19 4.06
1514 2236 5.865552 CAGCATGCAGTTAGCTAAACAAATT 59.134 36.000 21.98 0.00 45.94 1.82
1518 2240 7.430502 GCATGCAGTTAGCTAAACAAATTAGAG 59.569 37.037 14.21 0.00 43.16 2.43
1519 2241 7.979444 TGCAGTTAGCTAAACAAATTAGAGT 57.021 32.000 7.99 0.00 43.16 3.24
1520 2242 7.806690 TGCAGTTAGCTAAACAAATTAGAGTG 58.193 34.615 7.99 0.00 43.16 3.51
1521 2243 7.444183 TGCAGTTAGCTAAACAAATTAGAGTGT 59.556 33.333 7.99 0.00 43.16 3.55
1522 2244 7.746475 GCAGTTAGCTAAACAAATTAGAGTGTG 59.254 37.037 7.99 0.00 43.16 3.82
1523 2245 8.230486 CAGTTAGCTAAACAAATTAGAGTGTGG 58.770 37.037 7.99 0.00 43.16 4.17
1524 2246 7.937394 AGTTAGCTAAACAAATTAGAGTGTGGT 59.063 33.333 7.99 0.00 43.16 4.16
1525 2247 8.565416 GTTAGCTAAACAAATTAGAGTGTGGTT 58.435 33.333 7.99 0.00 43.16 3.67
1526 2248 9.781633 TTAGCTAAACAAATTAGAGTGTGGTTA 57.218 29.630 2.97 0.00 43.16 2.85
1527 2249 8.324163 AGCTAAACAAATTAGAGTGTGGTTAG 57.676 34.615 6.15 6.15 43.16 2.34
1528 2250 7.390718 AGCTAAACAAATTAGAGTGTGGTTAGG 59.609 37.037 10.77 0.00 43.16 2.69
1529 2251 7.174426 GCTAAACAAATTAGAGTGTGGTTAGGT 59.826 37.037 10.77 0.00 43.16 3.08
1530 2252 7.506328 AAACAAATTAGAGTGTGGTTAGGTC 57.494 36.000 0.00 0.00 0.00 3.85
1531 2253 6.435292 ACAAATTAGAGTGTGGTTAGGTCT 57.565 37.500 0.00 0.00 0.00 3.85
1532 2254 6.465084 ACAAATTAGAGTGTGGTTAGGTCTC 58.535 40.000 0.00 0.00 0.00 3.36
1533 2255 6.042781 ACAAATTAGAGTGTGGTTAGGTCTCA 59.957 38.462 0.00 0.00 0.00 3.27
1534 2256 5.923733 ATTAGAGTGTGGTTAGGTCTCAG 57.076 43.478 0.00 0.00 0.00 3.35
1535 2257 3.246416 AGAGTGTGGTTAGGTCTCAGT 57.754 47.619 0.00 0.00 0.00 3.41
1536 2258 3.158676 AGAGTGTGGTTAGGTCTCAGTC 58.841 50.000 0.00 0.00 0.00 3.51
1537 2259 1.887198 AGTGTGGTTAGGTCTCAGTCG 59.113 52.381 0.00 0.00 0.00 4.18
1538 2260 1.884579 GTGTGGTTAGGTCTCAGTCGA 59.115 52.381 0.00 0.00 0.00 4.20
1539 2261 1.884579 TGTGGTTAGGTCTCAGTCGAC 59.115 52.381 7.70 7.70 0.00 4.20
1540 2262 2.161030 GTGGTTAGGTCTCAGTCGACT 58.839 52.381 13.58 13.58 34.38 4.18
1541 2263 2.095161 GTGGTTAGGTCTCAGTCGACTG 60.095 54.545 34.76 34.76 45.08 3.51
1554 2276 5.769967 CAGTCGACTGAGATTTAACCAAG 57.230 43.478 36.73 7.53 46.59 3.61
1555 2277 5.470368 CAGTCGACTGAGATTTAACCAAGA 58.530 41.667 36.73 0.00 46.59 3.02
1556 2278 5.926542 CAGTCGACTGAGATTTAACCAAGAA 59.073 40.000 36.73 0.00 46.59 2.52
1557 2279 6.591834 CAGTCGACTGAGATTTAACCAAGAAT 59.408 38.462 36.73 0.00 46.59 2.40
1558 2280 6.814146 AGTCGACTGAGATTTAACCAAGAATC 59.186 38.462 19.30 0.00 33.49 2.52
1559 2281 5.805486 TCGACTGAGATTTAACCAAGAATCG 59.195 40.000 0.00 0.00 37.35 3.34
1560 2282 5.005779 CGACTGAGATTTAACCAAGAATCGG 59.994 44.000 0.00 0.00 37.35 4.18
1561 2283 5.805728 ACTGAGATTTAACCAAGAATCGGT 58.194 37.500 0.00 0.00 37.35 4.69
1562 2284 5.875359 ACTGAGATTTAACCAAGAATCGGTC 59.125 40.000 0.00 0.00 37.35 4.79
1563 2285 5.800296 TGAGATTTAACCAAGAATCGGTCA 58.200 37.500 0.00 0.00 37.35 4.02
1564 2286 6.234920 TGAGATTTAACCAAGAATCGGTCAA 58.765 36.000 0.00 0.00 37.35 3.18
1565 2287 6.371548 TGAGATTTAACCAAGAATCGGTCAAG 59.628 38.462 0.00 0.00 37.35 3.02
1566 2288 6.238648 AGATTTAACCAAGAATCGGTCAAGT 58.761 36.000 0.00 0.00 37.35 3.16
1567 2289 5.682943 TTTAACCAAGAATCGGTCAAGTG 57.317 39.130 0.00 0.00 34.99 3.16
1568 2290 3.485463 AACCAAGAATCGGTCAAGTGA 57.515 42.857 0.00 0.00 34.99 3.41
1569 2291 2.767505 ACCAAGAATCGGTCAAGTGAC 58.232 47.619 2.69 2.69 44.04 3.67
1570 2292 2.104111 ACCAAGAATCGGTCAAGTGACA 59.896 45.455 13.21 0.00 46.47 3.58
1571 2293 3.244561 ACCAAGAATCGGTCAAGTGACAT 60.245 43.478 13.21 0.00 46.47 3.06
1572 2294 4.020573 ACCAAGAATCGGTCAAGTGACATA 60.021 41.667 13.21 1.11 46.47 2.29
1573 2295 4.568359 CCAAGAATCGGTCAAGTGACATAG 59.432 45.833 13.21 4.51 46.47 2.23
1574 2296 3.786635 AGAATCGGTCAAGTGACATAGC 58.213 45.455 13.21 0.00 46.47 2.97
1575 2297 3.195610 AGAATCGGTCAAGTGACATAGCA 59.804 43.478 13.21 0.00 46.47 3.49
1576 2298 2.363788 TCGGTCAAGTGACATAGCAC 57.636 50.000 13.21 0.00 46.47 4.40
1577 2299 0.992072 CGGTCAAGTGACATAGCACG 59.008 55.000 13.21 2.96 46.47 5.34
1578 2300 1.668919 CGGTCAAGTGACATAGCACGT 60.669 52.381 13.21 0.00 46.47 4.49
1579 2301 2.414957 CGGTCAAGTGACATAGCACGTA 60.415 50.000 13.21 0.00 46.47 3.57
1580 2302 3.581755 GGTCAAGTGACATAGCACGTAA 58.418 45.455 13.21 0.00 46.47 3.18
1581 2303 3.612860 GGTCAAGTGACATAGCACGTAAG 59.387 47.826 13.21 0.00 46.47 2.34
1582 2304 4.482386 GTCAAGTGACATAGCACGTAAGA 58.518 43.478 6.57 0.00 44.18 2.10
1583 2305 4.921515 GTCAAGTGACATAGCACGTAAGAA 59.078 41.667 6.57 0.00 44.18 2.52
1584 2306 5.404366 GTCAAGTGACATAGCACGTAAGAAA 59.596 40.000 6.57 0.00 44.18 2.52
1585 2307 5.633601 TCAAGTGACATAGCACGTAAGAAAG 59.366 40.000 0.00 0.00 43.42 2.62
1586 2308 5.386958 AGTGACATAGCACGTAAGAAAGA 57.613 39.130 0.00 0.00 43.42 2.52
1587 2309 5.403246 AGTGACATAGCACGTAAGAAAGAG 58.597 41.667 0.00 0.00 43.42 2.85
1588 2310 5.183331 AGTGACATAGCACGTAAGAAAGAGA 59.817 40.000 0.00 0.00 43.42 3.10
1589 2311 5.862323 GTGACATAGCACGTAAGAAAGAGAA 59.138 40.000 0.00 0.00 43.62 2.87
1590 2312 6.365247 GTGACATAGCACGTAAGAAAGAGAAA 59.635 38.462 0.00 0.00 43.62 2.52
1591 2313 6.586463 TGACATAGCACGTAAGAAAGAGAAAG 59.414 38.462 0.00 0.00 43.62 2.62
1592 2314 6.688578 ACATAGCACGTAAGAAAGAGAAAGA 58.311 36.000 0.00 0.00 43.62 2.52
1593 2315 7.152645 ACATAGCACGTAAGAAAGAGAAAGAA 58.847 34.615 0.00 0.00 43.62 2.52
1594 2316 7.656137 ACATAGCACGTAAGAAAGAGAAAGAAA 59.344 33.333 0.00 0.00 43.62 2.52
1595 2317 6.920569 AGCACGTAAGAAAGAGAAAGAAAA 57.079 33.333 0.00 0.00 43.62 2.29
1596 2318 7.316544 AGCACGTAAGAAAGAGAAAGAAAAA 57.683 32.000 0.00 0.00 43.62 1.94
1639 2361 9.860898 TCATGGATCTCAATATAACATCTTACG 57.139 33.333 0.00 0.00 0.00 3.18
1640 2362 9.091784 CATGGATCTCAATATAACATCTTACGG 57.908 37.037 0.00 0.00 0.00 4.02
1641 2363 8.417273 TGGATCTCAATATAACATCTTACGGA 57.583 34.615 0.00 0.00 0.00 4.69
1642 2364 9.035890 TGGATCTCAATATAACATCTTACGGAT 57.964 33.333 0.00 0.00 34.51 4.18
1653 2375 7.891183 AACATCTTACGGATATAGCATCAAC 57.109 36.000 0.00 0.00 32.64 3.18
1654 2376 6.093404 ACATCTTACGGATATAGCATCAACG 58.907 40.000 0.00 0.00 32.64 4.10
1655 2377 5.952526 TCTTACGGATATAGCATCAACGA 57.047 39.130 0.00 0.00 0.00 3.85
1656 2378 6.321848 TCTTACGGATATAGCATCAACGAA 57.678 37.500 0.00 0.00 0.00 3.85
1657 2379 6.379386 TCTTACGGATATAGCATCAACGAAG 58.621 40.000 0.00 0.00 0.00 3.79
1658 2380 7.309255 ATCTTACGGATATAGCATCAACGAAGT 60.309 37.037 0.00 0.00 35.57 3.01
1659 2381 4.547532 ACGGATATAGCATCAACGAAGTC 58.452 43.478 0.00 0.00 45.00 3.01
1660 2382 4.278669 ACGGATATAGCATCAACGAAGTCT 59.721 41.667 0.00 0.00 45.00 3.24
1661 2383 5.221263 ACGGATATAGCATCAACGAAGTCTT 60.221 40.000 0.00 0.00 45.00 3.01
1662 2384 6.016527 ACGGATATAGCATCAACGAAGTCTTA 60.017 38.462 0.00 0.00 45.00 2.10
1663 2385 6.524933 CGGATATAGCATCAACGAAGTCTTAG 59.475 42.308 0.00 0.00 45.00 2.18
1664 2386 7.371936 GGATATAGCATCAACGAAGTCTTAGT 58.628 38.462 0.00 0.00 45.00 2.24
1665 2387 7.539366 GGATATAGCATCAACGAAGTCTTAGTC 59.461 40.741 0.00 0.00 45.00 2.59
1666 2388 4.521130 AGCATCAACGAAGTCTTAGTCA 57.479 40.909 0.00 0.00 45.00 3.41
1667 2389 4.883083 AGCATCAACGAAGTCTTAGTCAA 58.117 39.130 0.00 0.00 45.00 3.18
1668 2390 4.686554 AGCATCAACGAAGTCTTAGTCAAC 59.313 41.667 0.00 0.00 45.00 3.18
1669 2391 4.686554 GCATCAACGAAGTCTTAGTCAACT 59.313 41.667 0.00 0.00 45.00 3.16
1670 2392 5.862323 GCATCAACGAAGTCTTAGTCAACTA 59.138 40.000 0.00 0.00 45.00 2.24
1671 2393 6.365247 GCATCAACGAAGTCTTAGTCAACTAA 59.635 38.462 0.00 2.82 45.00 2.24
1703 2425 7.836183 AGCAAGACTAAATGAATTAATCTGGGT 59.164 33.333 0.00 0.00 30.81 4.51
1704 2426 8.470002 GCAAGACTAAATGAATTAATCTGGGTT 58.530 33.333 0.00 0.00 30.81 4.11
1705 2427 9.793252 CAAGACTAAATGAATTAATCTGGGTTG 57.207 33.333 0.00 0.00 30.81 3.77
1706 2428 9.753674 AAGACTAAATGAATTAATCTGGGTTGA 57.246 29.630 0.00 0.00 30.81 3.18
1707 2429 9.178758 AGACTAAATGAATTAATCTGGGTTGAC 57.821 33.333 0.00 0.00 29.29 3.18
1708 2430 7.985476 ACTAAATGAATTAATCTGGGTTGACG 58.015 34.615 0.00 0.00 0.00 4.35
1709 2431 4.900635 ATGAATTAATCTGGGTTGACGC 57.099 40.909 0.00 0.00 0.00 5.19
1710 2432 2.675844 TGAATTAATCTGGGTTGACGCG 59.324 45.455 3.53 3.53 0.00 6.01
1711 2433 1.663695 ATTAATCTGGGTTGACGCGG 58.336 50.000 12.47 0.92 36.61 6.46
1712 2434 1.022451 TTAATCTGGGTTGACGCGGC 61.022 55.000 12.47 8.67 35.41 6.53
1713 2435 2.173758 TAATCTGGGTTGACGCGGCA 62.174 55.000 12.71 12.71 35.41 5.69
1714 2436 2.819984 AATCTGGGTTGACGCGGCAT 62.820 55.000 19.26 0.00 35.41 4.40
2018 2740 2.920645 CGGACACAGCTCCACGAGT 61.921 63.158 0.00 0.00 31.39 4.18
2267 2989 1.130054 AGGCTCTCACCAAGCTCCAA 61.130 55.000 0.00 0.00 39.75 3.53
2324 3046 0.687354 AGACCGTCACCAAGCAGATT 59.313 50.000 0.40 0.00 0.00 2.40
2879 3737 4.656117 TCGTTTCTGCAGCGCGGA 62.656 61.111 13.03 7.79 42.66 5.54
2906 3764 2.357034 GTGGTGCACGACGTGGAT 60.357 61.111 27.86 0.00 36.11 3.41
3167 4025 1.679977 CAACAGAGGCACCCCCATG 60.680 63.158 0.00 0.00 35.39 3.66
3287 4145 1.447140 GGAGCACGGCGTGTTCATA 60.447 57.895 42.35 0.00 43.74 2.15
3471 4329 4.501058 CGCTCAAGGTAAGAATAGTACCCC 60.501 50.000 0.00 0.00 41.80 4.95
3475 4333 5.664457 TCAAGGTAAGAATAGTACCCCTTCC 59.336 44.000 0.00 0.00 41.80 3.46
3479 4337 5.104776 GGTAAGAATAGTACCCCTTCCGTTT 60.105 44.000 0.00 0.00 35.86 3.60
3480 4338 4.750021 AGAATAGTACCCCTTCCGTTTC 57.250 45.455 0.00 0.00 0.00 2.78
3481 4339 4.359996 AGAATAGTACCCCTTCCGTTTCT 58.640 43.478 0.00 0.00 0.00 2.52
3482 4340 4.781621 AGAATAGTACCCCTTCCGTTTCTT 59.218 41.667 0.00 0.00 0.00 2.52
3483 4341 5.250082 AGAATAGTACCCCTTCCGTTTCTTT 59.750 40.000 0.00 0.00 0.00 2.52
3484 4342 3.870538 AGTACCCCTTCCGTTTCTTTT 57.129 42.857 0.00 0.00 0.00 2.27
3485 4343 4.174704 AGTACCCCTTCCGTTTCTTTTT 57.825 40.909 0.00 0.00 0.00 1.94
3486 4344 5.308976 AGTACCCCTTCCGTTTCTTTTTA 57.691 39.130 0.00 0.00 0.00 1.52
3487 4345 5.693961 AGTACCCCTTCCGTTTCTTTTTAA 58.306 37.500 0.00 0.00 0.00 1.52
3488 4346 6.309357 AGTACCCCTTCCGTTTCTTTTTAAT 58.691 36.000 0.00 0.00 0.00 1.40
3489 4347 5.717078 ACCCCTTCCGTTTCTTTTTAATC 57.283 39.130 0.00 0.00 0.00 1.75
3490 4348 5.391256 ACCCCTTCCGTTTCTTTTTAATCT 58.609 37.500 0.00 0.00 0.00 2.40
3491 4349 5.243060 ACCCCTTCCGTTTCTTTTTAATCTG 59.757 40.000 0.00 0.00 0.00 2.90
3492 4350 5.161358 CCCTTCCGTTTCTTTTTAATCTGC 58.839 41.667 0.00 0.00 0.00 4.26
3493 4351 5.278758 CCCTTCCGTTTCTTTTTAATCTGCA 60.279 40.000 0.00 0.00 0.00 4.41
3494 4352 6.389906 CCTTCCGTTTCTTTTTAATCTGCAT 58.610 36.000 0.00 0.00 0.00 3.96
3495 4353 7.362574 CCCTTCCGTTTCTTTTTAATCTGCATA 60.363 37.037 0.00 0.00 0.00 3.14
3496 4354 8.190784 CCTTCCGTTTCTTTTTAATCTGCATAT 58.809 33.333 0.00 0.00 0.00 1.78
3730 4588 1.757682 AAAAACGAAGGGTGCAGACA 58.242 45.000 0.00 0.00 0.00 3.41
3731 4589 1.308998 AAAACGAAGGGTGCAGACAG 58.691 50.000 0.00 0.00 0.00 3.51
3732 4590 0.180406 AAACGAAGGGTGCAGACAGT 59.820 50.000 0.00 0.00 0.00 3.55
3733 4591 0.532862 AACGAAGGGTGCAGACAGTG 60.533 55.000 0.00 0.00 0.00 3.66
3768 4626 5.124384 GCGAATAGAATAGCGTTTCTTTCG 58.876 41.667 23.97 23.97 41.92 3.46
4023 4913 4.868171 ACCAGCATGTGTTAGTGTTATACG 59.132 41.667 0.00 0.00 0.00 3.06
4051 4941 2.422479 CCCACAACATGAATCAGCAGAG 59.578 50.000 0.00 0.00 0.00 3.35
4055 4945 5.152097 CACAACATGAATCAGCAGAGAAAC 58.848 41.667 0.00 0.00 0.00 2.78
4056 4946 4.083643 ACAACATGAATCAGCAGAGAAACG 60.084 41.667 0.00 0.00 0.00 3.60
4078 4972 2.783122 ATTGCTGCTGCTGCTCCCTT 62.783 55.000 27.67 9.05 40.48 3.95
4110 5004 5.192522 ACAGTTACATGGATCTTGGAAGGAT 59.807 40.000 0.00 0.00 0.00 3.24
4158 5056 2.224843 TGGAGTTGCCATGACAATGTCT 60.225 45.455 14.97 0.00 43.33 3.41
4179 5082 3.814625 TGTCAGTGTGTAATTCTTGGCA 58.185 40.909 0.00 0.00 0.00 4.92
4186 5089 5.048504 AGTGTGTAATTCTTGGCATGTTCTG 60.049 40.000 0.00 0.00 0.00 3.02
4202 5105 0.321346 TCTGATGCTTCCAAGTGCGA 59.679 50.000 0.00 0.00 0.00 5.10
4220 5123 1.673923 CGAAGCAGATGAGTTGGAGCA 60.674 52.381 0.00 0.00 0.00 4.26
4230 5133 5.415077 AGATGAGTTGGAGCATTTCTTTGAG 59.585 40.000 0.00 0.00 0.00 3.02
4233 5136 2.291209 TGGAGCATTTCTTTGAGCCA 57.709 45.000 0.00 0.00 0.00 4.75
4241 5144 4.641989 GCATTTCTTTGAGCCAGAGGATAA 59.358 41.667 0.00 0.00 0.00 1.75
4242 5145 5.221009 GCATTTCTTTGAGCCAGAGGATAAG 60.221 44.000 0.00 0.00 0.00 1.73
4244 5147 6.620877 TTTCTTTGAGCCAGAGGATAAGTA 57.379 37.500 0.00 0.00 0.00 2.24
4246 5149 5.273208 TCTTTGAGCCAGAGGATAAGTACT 58.727 41.667 0.00 0.00 0.00 2.73
4247 5150 5.361285 TCTTTGAGCCAGAGGATAAGTACTC 59.639 44.000 0.00 0.00 35.36 2.59
4248 5151 3.567397 TGAGCCAGAGGATAAGTACTCC 58.433 50.000 0.00 0.00 35.78 3.85
4249 5152 2.894765 GAGCCAGAGGATAAGTACTCCC 59.105 54.545 0.00 0.00 35.78 4.30
4250 5153 2.520549 AGCCAGAGGATAAGTACTCCCT 59.479 50.000 10.21 10.21 35.78 4.20
4251 5154 2.894765 GCCAGAGGATAAGTACTCCCTC 59.105 54.545 21.91 21.91 44.14 4.30
4257 5160 6.887626 GAGGATAAGTACTCCCTCTGTAAG 57.112 45.833 22.04 0.00 41.40 2.34
4258 5161 6.344232 AGGATAAGTACTCCCTCTGTAAGT 57.656 41.667 0.00 0.00 32.89 2.24
4259 5162 6.743788 AGGATAAGTACTCCCTCTGTAAGTT 58.256 40.000 0.00 0.00 32.89 2.66
4260 5163 7.190501 AGGATAAGTACTCCCTCTGTAAGTTT 58.809 38.462 0.00 0.00 32.89 2.66
4261 5164 7.679025 AGGATAAGTACTCCCTCTGTAAGTTTT 59.321 37.037 0.00 0.00 32.89 2.43
4262 5165 8.319881 GGATAAGTACTCCCTCTGTAAGTTTTT 58.680 37.037 0.00 0.00 33.76 1.94
4270 5173 9.892130 ACTCCCTCTGTAAGTTTTTATAAGATG 57.108 33.333 0.00 0.00 33.76 2.90
4271 5174 9.892130 CTCCCTCTGTAAGTTTTTATAAGATGT 57.108 33.333 0.00 0.00 33.76 3.06
4289 5192 6.803154 AGATGTTTAAGGTCACTAAAGTGC 57.197 37.500 5.21 1.28 45.25 4.40
4290 5193 6.534634 AGATGTTTAAGGTCACTAAAGTGCT 58.465 36.000 5.21 0.00 45.25 4.40
4291 5194 6.428159 AGATGTTTAAGGTCACTAAAGTGCTG 59.572 38.462 5.21 0.00 45.25 4.41
4292 5195 5.676552 TGTTTAAGGTCACTAAAGTGCTGA 58.323 37.500 5.21 0.00 45.25 4.26
4293 5196 5.526111 TGTTTAAGGTCACTAAAGTGCTGAC 59.474 40.000 5.21 0.00 45.25 3.51
4294 5197 3.838244 AAGGTCACTAAAGTGCTGACA 57.162 42.857 5.21 0.00 45.25 3.58
4295 5198 4.357918 AAGGTCACTAAAGTGCTGACAT 57.642 40.909 5.21 0.00 45.25 3.06
4296 5199 5.483685 AAGGTCACTAAAGTGCTGACATA 57.516 39.130 5.21 0.00 45.25 2.29
4297 5200 5.078411 AGGTCACTAAAGTGCTGACATAG 57.922 43.478 5.21 0.00 45.25 2.23
4298 5201 4.772624 AGGTCACTAAAGTGCTGACATAGA 59.227 41.667 5.21 0.00 45.25 1.98
4299 5202 5.246203 AGGTCACTAAAGTGCTGACATAGAA 59.754 40.000 5.21 0.00 45.25 2.10
4300 5203 5.348997 GGTCACTAAAGTGCTGACATAGAAC 59.651 44.000 5.21 0.00 45.25 3.01
4301 5204 5.926542 GTCACTAAAGTGCTGACATAGAACA 59.073 40.000 5.21 0.00 45.25 3.18
4302 5205 6.591834 GTCACTAAAGTGCTGACATAGAACAT 59.408 38.462 5.21 0.00 45.25 2.71
4303 5206 6.813649 TCACTAAAGTGCTGACATAGAACATC 59.186 38.462 5.21 0.00 45.25 3.06
4304 5207 6.815641 CACTAAAGTGCTGACATAGAACATCT 59.184 38.462 0.00 0.00 37.42 2.90
4305 5208 7.332926 CACTAAAGTGCTGACATAGAACATCTT 59.667 37.037 0.00 0.00 37.42 2.40
4306 5209 8.531982 ACTAAAGTGCTGACATAGAACATCTTA 58.468 33.333 0.00 0.00 37.42 2.10
4307 5210 9.539825 CTAAAGTGCTGACATAGAACATCTTAT 57.460 33.333 0.00 0.00 37.42 1.73
4309 5212 9.890629 AAAGTGCTGACATAGAACATCTTATAA 57.109 29.630 0.00 0.00 37.42 0.98
4310 5213 9.890629 AAGTGCTGACATAGAACATCTTATAAA 57.109 29.630 0.00 0.00 37.42 1.40
4311 5214 9.890629 AGTGCTGACATAGAACATCTTATAAAA 57.109 29.630 0.00 0.00 37.42 1.52
4350 5253 6.111382 AGTAGTACATATGCATGCATCCATC 58.889 40.000 35.35 21.44 37.82 3.51
4351 5254 4.267536 AGTACATATGCATGCATCCATCC 58.732 43.478 35.35 20.86 37.82 3.51
4352 5255 2.453521 ACATATGCATGCATCCATCCC 58.546 47.619 35.35 0.00 37.82 3.85
4365 5278 3.163616 TCCATCCCTTGGGTTTTGTAC 57.836 47.619 5.51 0.00 46.45 2.90
4377 5290 7.394923 CCTTGGGTTTTGTACAGATGGTTATTA 59.605 37.037 0.00 0.00 0.00 0.98
4439 5359 6.183360 GCCTGTCTTTAGTTTATGGATGTGAC 60.183 42.308 0.00 0.00 0.00 3.67
4442 5362 8.862325 TGTCTTTAGTTTATGGATGTGACAAT 57.138 30.769 0.00 0.00 0.00 2.71
4450 5370 8.855110 AGTTTATGGATGTGACAATTACAACAA 58.145 29.630 0.00 0.00 0.00 2.83
4452 5372 6.899393 ATGGATGTGACAATTACAACAAGT 57.101 33.333 0.00 0.00 0.00 3.16
4453 5373 6.707440 TGGATGTGACAATTACAACAAGTT 57.293 33.333 0.00 0.00 0.00 2.66
4454 5374 6.734137 TGGATGTGACAATTACAACAAGTTC 58.266 36.000 0.00 0.00 0.00 3.01
4457 5377 7.920682 GGATGTGACAATTACAACAAGTTCTTT 59.079 33.333 0.00 0.00 0.00 2.52
4458 5378 8.633075 ATGTGACAATTACAACAAGTTCTTTG 57.367 30.769 0.00 0.00 42.68 2.77
4459 5379 7.821652 TGTGACAATTACAACAAGTTCTTTGA 58.178 30.769 1.51 0.00 39.21 2.69
4460 5380 8.465999 TGTGACAATTACAACAAGTTCTTTGAT 58.534 29.630 1.51 0.00 39.21 2.57
4461 5381 8.958043 GTGACAATTACAACAAGTTCTTTGATC 58.042 33.333 1.51 0.00 39.21 2.92
4462 5382 8.902806 TGACAATTACAACAAGTTCTTTGATCT 58.097 29.630 0.00 0.00 39.21 2.75
4465 5385 8.571336 CAATTACAACAAGTTCTTTGATCTCCT 58.429 33.333 0.00 0.00 39.21 3.69
4466 5386 9.793259 AATTACAACAAGTTCTTTGATCTCCTA 57.207 29.630 0.00 0.00 39.21 2.94
4467 5387 8.833231 TTACAACAAGTTCTTTGATCTCCTAG 57.167 34.615 0.00 0.00 39.21 3.02
4470 5390 8.429641 ACAACAAGTTCTTTGATCTCCTAGTAA 58.570 33.333 0.00 0.00 39.21 2.24
4472 5392 9.847224 AACAAGTTCTTTGATCTCCTAGTAAAA 57.153 29.630 0.00 0.00 39.21 1.52
4474 5394 9.712305 CAAGTTCTTTGATCTCCTAGTAAAAGA 57.288 33.333 0.00 0.00 39.21 2.52
4475 5395 9.936759 AAGTTCTTTGATCTCCTAGTAAAAGAG 57.063 33.333 0.00 0.00 35.67 2.85
4477 5397 9.361315 GTTCTTTGATCTCCTAGTAAAAGAGTC 57.639 37.037 0.00 0.00 35.67 3.36
4478 5398 8.651589 TCTTTGATCTCCTAGTAAAAGAGTCA 57.348 34.615 0.00 0.00 31.79 3.41
4480 5400 6.777213 TGATCTCCTAGTAAAAGAGTCACC 57.223 41.667 0.00 0.00 0.00 4.02
4481 5401 5.357314 TGATCTCCTAGTAAAAGAGTCACCG 59.643 44.000 0.00 0.00 0.00 4.94
4482 5402 3.442977 TCTCCTAGTAAAAGAGTCACCGC 59.557 47.826 0.00 0.00 0.00 5.68
4484 5404 3.767673 TCCTAGTAAAAGAGTCACCGCAT 59.232 43.478 0.00 0.00 0.00 4.73
4485 5405 4.222145 TCCTAGTAAAAGAGTCACCGCATT 59.778 41.667 0.00 0.00 0.00 3.56
4486 5406 4.330074 CCTAGTAAAAGAGTCACCGCATTG 59.670 45.833 0.00 0.00 0.00 2.82
4487 5407 2.484264 AGTAAAAGAGTCACCGCATTGC 59.516 45.455 0.00 0.00 0.00 3.56
4514 5434 6.488769 TTATAGATCGCCTCCTGGTTTTTA 57.511 37.500 0.00 0.00 35.27 1.52
4525 5445 6.583562 CCTCCTGGTTTTTATCCTAGTGTAG 58.416 44.000 0.00 0.00 0.00 2.74
4535 5455 7.667043 TTTATCCTAGTGTAGTGCTTGTTTG 57.333 36.000 0.00 0.00 0.00 2.93
4559 5479 2.158279 TGGAATCATGGGAATGGATGGG 60.158 50.000 0.00 0.00 0.00 4.00
4563 5483 4.830717 ATCATGGGAATGGATGGGTTAA 57.169 40.909 0.00 0.00 0.00 2.01
4567 5487 3.909732 TGGGAATGGATGGGTTAACATC 58.090 45.455 8.10 2.81 45.05 3.06
4572 5492 5.388654 GAATGGATGGGTTAACATCTGGAT 58.611 41.667 8.10 0.00 45.11 3.41
4576 5496 4.580580 GGATGGGTTAACATCTGGATTGTC 59.419 45.833 8.10 0.00 45.11 3.18
4581 5501 4.935808 GGTTAACATCTGGATTGTCGAAGT 59.064 41.667 8.10 0.00 0.00 3.01
4583 5503 2.977914 ACATCTGGATTGTCGAAGTGG 58.022 47.619 0.00 0.00 0.00 4.00
4595 5515 2.864343 GTCGAAGTGGCGCATACTAATT 59.136 45.455 10.83 0.00 0.00 1.40
4597 5517 2.221055 CGAAGTGGCGCATACTAATTCC 59.779 50.000 10.83 0.92 0.00 3.01
4612 5532 3.336138 AATTCCTCCTTTCCGTGACTC 57.664 47.619 0.00 0.00 0.00 3.36
4613 5533 2.011122 TTCCTCCTTTCCGTGACTCT 57.989 50.000 0.00 0.00 0.00 3.24
4614 5534 2.893215 TCCTCCTTTCCGTGACTCTA 57.107 50.000 0.00 0.00 0.00 2.43
4616 5536 2.041350 TCCTCCTTTCCGTGACTCTAGT 59.959 50.000 0.00 0.00 0.00 2.57
4617 5537 2.164624 CCTCCTTTCCGTGACTCTAGTG 59.835 54.545 0.00 0.00 0.00 2.74
4618 5538 3.082548 CTCCTTTCCGTGACTCTAGTGA 58.917 50.000 0.00 0.00 0.00 3.41
4619 5539 3.697045 CTCCTTTCCGTGACTCTAGTGAT 59.303 47.826 0.00 0.00 0.00 3.06
4620 5540 4.087182 TCCTTTCCGTGACTCTAGTGATT 58.913 43.478 0.00 0.00 0.00 2.57
4622 5542 5.713389 TCCTTTCCGTGACTCTAGTGATTTA 59.287 40.000 0.00 0.00 0.00 1.40
4623 5543 6.380274 TCCTTTCCGTGACTCTAGTGATTTAT 59.620 38.462 0.00 0.00 0.00 1.40
4624 5544 6.697892 CCTTTCCGTGACTCTAGTGATTTATC 59.302 42.308 0.00 0.00 0.00 1.75
4625 5545 7.406031 TTTCCGTGACTCTAGTGATTTATCT 57.594 36.000 0.00 0.00 0.00 1.98
4626 5546 6.621316 TCCGTGACTCTAGTGATTTATCTC 57.379 41.667 0.00 0.00 0.00 2.75
4627 5547 6.358178 TCCGTGACTCTAGTGATTTATCTCT 58.642 40.000 0.00 0.63 35.16 3.10
4628 5548 6.261158 TCCGTGACTCTAGTGATTTATCTCTG 59.739 42.308 0.00 0.00 33.25 3.35
4629 5549 6.434596 CGTGACTCTAGTGATTTATCTCTGG 58.565 44.000 0.00 2.62 33.25 3.86
4630 5550 6.212955 GTGACTCTAGTGATTTATCTCTGGC 58.787 44.000 0.00 0.00 33.25 4.85
4631 5551 5.009110 TGACTCTAGTGATTTATCTCTGGCG 59.991 44.000 0.00 0.66 33.25 5.69
4632 5552 4.890581 ACTCTAGTGATTTATCTCTGGCGT 59.109 41.667 0.00 1.18 33.25 5.68
4633 5553 5.009210 ACTCTAGTGATTTATCTCTGGCGTC 59.991 44.000 0.00 0.00 33.25 5.19
4634 5554 3.085443 AGTGATTTATCTCTGGCGTCG 57.915 47.619 0.00 0.00 30.22 5.12
4635 5555 1.523095 GTGATTTATCTCTGGCGTCGC 59.477 52.381 9.22 9.22 0.00 5.19
4636 5556 1.136110 TGATTTATCTCTGGCGTCGCA 59.864 47.619 20.50 4.36 0.00 5.10
4674 5594 0.942410 GCCGTGTCGAGCTTGTTGTA 60.942 55.000 0.00 0.00 0.00 2.41
4675 5595 1.060713 CCGTGTCGAGCTTGTTGTAG 58.939 55.000 0.00 0.00 0.00 2.74
4683 5603 3.439476 TCGAGCTTGTTGTAGTAGAGTCC 59.561 47.826 0.00 0.00 0.00 3.85
4715 5635 8.707839 GTGTTTGTGTTTTCTTTCTGAATTTGA 58.292 29.630 0.00 0.00 34.24 2.69
4742 5662 9.319143 AGGTTATTCTAGATTTGTTTCATCTCG 57.681 33.333 0.00 0.00 32.94 4.04
4748 5668 9.869757 TTCTAGATTTGTTTCATCTCGTTCATA 57.130 29.630 0.00 0.00 32.94 2.15
4774 5700 5.695851 ATACAACTCCTTTTGCAGTTCAG 57.304 39.130 0.00 0.00 30.06 3.02
4788 5714 5.603596 TGCAGTTCAGCAATTTCAGATTTT 58.396 33.333 0.00 0.00 42.46 1.82
4789 5715 5.464057 TGCAGTTCAGCAATTTCAGATTTTG 59.536 36.000 0.00 0.00 42.46 2.44
4791 5717 6.201425 GCAGTTCAGCAATTTCAGATTTTGAA 59.799 34.615 0.00 0.00 43.92 2.69
4792 5718 7.568861 GCAGTTCAGCAATTTCAGATTTTGAAG 60.569 37.037 0.00 0.00 46.01 3.02
4793 5719 7.650504 CAGTTCAGCAATTTCAGATTTTGAAGA 59.349 33.333 0.00 0.00 46.01 2.87
4794 5720 7.650903 AGTTCAGCAATTTCAGATTTTGAAGAC 59.349 33.333 0.00 0.00 46.01 3.01
4800 5726 9.415544 GCAATTTCAGATTTTGAAGACTAATGT 57.584 29.630 0.00 0.00 46.01 2.71
4803 5729 6.169419 TCAGATTTTGAAGACTAATGTGCG 57.831 37.500 0.00 0.00 31.34 5.34
4804 5730 5.122239 TCAGATTTTGAAGACTAATGTGCGG 59.878 40.000 0.00 0.00 31.34 5.69
4810 5736 2.209838 AGACTAATGTGCGGTCATCG 57.790 50.000 0.00 0.00 42.76 3.84
4813 5739 0.930310 CTAATGTGCGGTCATCGGTG 59.070 55.000 0.00 0.00 39.69 4.94
4836 5762 3.306917 TTTGTTGAGCCATCAATGCAG 57.693 42.857 0.00 0.00 46.75 4.41
4839 5765 3.093814 TGTTGAGCCATCAATGCAGAAT 58.906 40.909 0.00 0.00 46.75 2.40
4840 5766 4.271661 TGTTGAGCCATCAATGCAGAATA 58.728 39.130 0.00 0.00 46.75 1.75
4841 5767 4.096833 TGTTGAGCCATCAATGCAGAATAC 59.903 41.667 0.00 0.00 46.75 1.89
4842 5768 4.160642 TGAGCCATCAATGCAGAATACT 57.839 40.909 0.00 0.00 30.61 2.12
4843 5769 5.294734 TGAGCCATCAATGCAGAATACTA 57.705 39.130 0.00 0.00 30.61 1.82
4844 5770 5.059161 TGAGCCATCAATGCAGAATACTAC 58.941 41.667 0.00 0.00 30.61 2.73
4845 5771 5.039920 AGCCATCAATGCAGAATACTACA 57.960 39.130 0.00 0.00 0.00 2.74
4847 5773 5.704515 AGCCATCAATGCAGAATACTACATC 59.295 40.000 0.00 0.00 29.80 3.06
4848 5774 5.471116 GCCATCAATGCAGAATACTACATCA 59.529 40.000 0.00 0.00 29.80 3.07
4849 5775 6.016860 GCCATCAATGCAGAATACTACATCAA 60.017 38.462 0.00 0.00 29.80 2.57
4850 5776 7.358066 CCATCAATGCAGAATACTACATCAAC 58.642 38.462 0.00 0.00 29.80 3.18
4851 5777 7.228108 CCATCAATGCAGAATACTACATCAACT 59.772 37.037 0.00 0.00 29.80 3.16
4852 5778 7.543947 TCAATGCAGAATACTACATCAACTG 57.456 36.000 0.00 0.00 29.80 3.16
4853 5779 5.998454 ATGCAGAATACTACATCAACTGC 57.002 39.130 0.00 0.00 45.92 4.40
4854 5780 4.191544 TGCAGAATACTACATCAACTGCC 58.808 43.478 0.00 0.00 45.39 4.85
4855 5781 4.191544 GCAGAATACTACATCAACTGCCA 58.808 43.478 0.00 0.00 41.88 4.92
4857 5783 5.178061 CAGAATACTACATCAACTGCCACA 58.822 41.667 0.00 0.00 0.00 4.17
4858 5784 5.643348 CAGAATACTACATCAACTGCCACAA 59.357 40.000 0.00 0.00 0.00 3.33
4859 5785 6.317140 CAGAATACTACATCAACTGCCACAAT 59.683 38.462 0.00 0.00 0.00 2.71
4860 5786 7.495606 CAGAATACTACATCAACTGCCACAATA 59.504 37.037 0.00 0.00 0.00 1.90
4861 5787 7.712639 AGAATACTACATCAACTGCCACAATAG 59.287 37.037 0.00 0.00 0.00 1.73
4862 5788 4.517285 ACTACATCAACTGCCACAATAGG 58.483 43.478 0.00 0.00 0.00 2.57
4863 5789 3.719268 ACATCAACTGCCACAATAGGA 57.281 42.857 0.00 0.00 0.00 2.94
4864 5790 3.347216 ACATCAACTGCCACAATAGGAC 58.653 45.455 0.00 0.00 0.00 3.85
4867 5793 4.098914 TCAACTGCCACAATAGGACTTT 57.901 40.909 0.00 0.00 0.00 2.66
4868 5794 3.820467 TCAACTGCCACAATAGGACTTTG 59.180 43.478 0.00 0.00 0.00 2.77
4869 5795 3.788227 ACTGCCACAATAGGACTTTGA 57.212 42.857 0.00 0.00 0.00 2.69
4870 5796 4.307032 ACTGCCACAATAGGACTTTGAT 57.693 40.909 0.00 0.00 0.00 2.57
4872 5798 4.702131 ACTGCCACAATAGGACTTTGATTC 59.298 41.667 0.00 0.00 0.00 2.52
4875 5801 4.462483 GCCACAATAGGACTTTGATTCCAA 59.538 41.667 0.00 0.00 35.33 3.53
4877 5803 6.351286 GCCACAATAGGACTTTGATTCCAAAT 60.351 38.462 0.00 0.00 41.03 2.32
4880 5806 9.740239 CACAATAGGACTTTGATTCCAAATATG 57.260 33.333 0.00 0.00 41.03 1.78
4881 5807 8.416329 ACAATAGGACTTTGATTCCAAATATGC 58.584 33.333 0.00 0.00 41.03 3.14
4882 5808 8.415553 CAATAGGACTTTGATTCCAAATATGCA 58.584 33.333 0.00 0.00 41.03 3.96
4884 5810 7.243604 AGGACTTTGATTCCAAATATGCAAA 57.756 32.000 0.00 0.00 41.03 3.68
4886 5812 8.980596 AGGACTTTGATTCCAAATATGCAAATA 58.019 29.630 0.00 0.00 41.03 1.40
4887 5813 9.252962 GGACTTTGATTCCAAATATGCAAATAG 57.747 33.333 0.00 0.00 41.03 1.73
4897 5823 9.194972 TCCAAATATGCAAATAGATTTACCACA 57.805 29.630 0.00 0.00 0.00 4.17
4898 5824 9.814899 CCAAATATGCAAATAGATTTACCACAA 57.185 29.630 0.00 0.00 0.00 3.33
4904 5830 8.531622 TGCAAATAGATTTACCACAACATTTG 57.468 30.769 0.00 0.00 35.98 2.32
4916 5842 4.511082 CCACAACATTTGGTTCAACATTCC 59.489 41.667 0.00 0.00 37.72 3.01
4929 5855 5.648178 TCAACATTCCATCTCACCAAATG 57.352 39.130 0.00 0.00 34.34 2.32
4937 5863 4.641541 TCCATCTCACCAAATGCAGTTATG 59.358 41.667 0.00 1.28 0.00 1.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
102 105 0.863144 GGCGAAACAGCACTAAACGA 59.137 50.000 0.00 0.00 39.27 3.85
266 271 9.140874 TGGTATGTGAATCCAATATATTGCAAA 57.859 29.630 18.40 7.79 36.48 3.68
377 491 9.586150 CGCAAAATAGCATAAACAGAGTATTAG 57.414 33.333 0.00 0.00 0.00 1.73
378 492 8.067784 GCGCAAAATAGCATAAACAGAGTATTA 58.932 33.333 0.30 0.00 0.00 0.98
379 493 6.912591 GCGCAAAATAGCATAAACAGAGTATT 59.087 34.615 0.30 0.00 0.00 1.89
380 494 6.038161 TGCGCAAAATAGCATAAACAGAGTAT 59.962 34.615 8.16 0.00 38.59 2.12
387 501 4.490160 CCGTTTGCGCAAAATAGCATAAAC 60.490 41.667 35.09 18.97 43.42 2.01
395 509 3.851976 ATTACCCGTTTGCGCAAAATA 57.148 38.095 35.09 21.49 36.67 1.40
400 514 1.080298 CACTATTACCCGTTTGCGCA 58.920 50.000 5.66 5.66 36.67 6.09
402 516 1.365699 AGCACTATTACCCGTTTGCG 58.634 50.000 0.00 0.00 35.10 4.85
470 584 9.366216 GTGTAAATCAGAATATGTACACACTGA 57.634 33.333 18.39 18.39 40.51 3.41
471 585 9.150348 TGTGTAAATCAGAATATGTACACACTG 57.850 33.333 13.45 5.95 43.71 3.66
495 609 5.393866 AGTCATTTTGGAACACCCTATTGT 58.606 37.500 0.00 0.00 39.29 2.71
500 631 3.421844 GCTAGTCATTTTGGAACACCCT 58.578 45.455 0.00 0.00 39.29 4.34
502 633 2.492088 GGGCTAGTCATTTTGGAACACC 59.508 50.000 0.00 0.00 39.29 4.16
528 659 2.498167 CGGTCATCAATCCCTTCATCC 58.502 52.381 0.00 0.00 0.00 3.51
547 678 3.358076 GAGCCACGAGGGAGAACCG 62.358 68.421 0.00 0.00 46.96 4.44
570 701 4.401022 TCTACCGTTACAGAAGAAGACCA 58.599 43.478 0.00 0.00 0.00 4.02
575 706 7.719483 TCTCTTTTTCTACCGTTACAGAAGAA 58.281 34.615 0.00 0.00 32.62 2.52
577 708 7.115095 CACTCTCTTTTTCTACCGTTACAGAAG 59.885 40.741 0.00 0.00 32.62 2.85
578 709 6.921857 CACTCTCTTTTTCTACCGTTACAGAA 59.078 38.462 0.00 0.00 0.00 3.02
579 710 6.263842 TCACTCTCTTTTTCTACCGTTACAGA 59.736 38.462 0.00 0.00 0.00 3.41
580 711 6.444633 TCACTCTCTTTTTCTACCGTTACAG 58.555 40.000 0.00 0.00 0.00 2.74
589 720 7.548075 ACGTCAAACTTTCACTCTCTTTTTCTA 59.452 33.333 0.00 0.00 0.00 2.10
616 752 5.001232 TGGACTAATGACTTTTTCCTTCCG 58.999 41.667 0.00 0.00 0.00 4.30
657 794 5.298276 GGACTGTGTGTTTGGAAGTTTGATA 59.702 40.000 0.00 0.00 0.00 2.15
691 828 4.836125 AAACATGTGAATCACTGGTCAC 57.164 40.909 14.97 6.77 43.66 3.67
752 893 4.331108 GACTGGAGCAAGAGGATTCTTTT 58.669 43.478 0.00 0.00 41.71 2.27
756 897 1.556911 TGGACTGGAGCAAGAGGATTC 59.443 52.381 0.00 0.00 0.00 2.52
791 1031 4.335315 CAGCTCCGCCACATATTTTTCTAA 59.665 41.667 0.00 0.00 0.00 2.10
793 1033 2.684881 CAGCTCCGCCACATATTTTTCT 59.315 45.455 0.00 0.00 0.00 2.52
803 1043 3.730761 CAAGCACAGCTCCGCCAC 61.731 66.667 0.21 0.00 38.25 5.01
833 1077 6.018343 GGAGCTGCTGATTAAATAGAGACAAC 60.018 42.308 7.01 0.00 0.00 3.32
863 1107 2.093764 GGAGAAGATGAGGTGACACAGG 60.094 54.545 8.08 0.00 33.32 4.00
927 1175 3.243168 TGCAGCTTGTGATGAACTGTTTC 60.243 43.478 0.00 0.00 0.00 2.78
933 1181 1.264020 TCGTTGCAGCTTGTGATGAAC 59.736 47.619 0.00 0.00 0.00 3.18
938 1186 1.783284 CTACTCGTTGCAGCTTGTGA 58.217 50.000 0.00 0.00 0.00 3.58
939 1187 0.164647 GCTACTCGTTGCAGCTTGTG 59.835 55.000 0.00 0.00 32.46 3.33
940 1188 0.034059 AGCTACTCGTTGCAGCTTGT 59.966 50.000 6.29 0.00 42.95 3.16
1101 1353 2.424956 GGCAAGAGATCGAAGCCATTTT 59.575 45.455 14.05 0.00 44.59 1.82
1235 1503 1.135915 ACGCAATTGGAACTGCAAACA 59.864 42.857 7.72 0.00 38.52 2.83
1303 1571 1.965754 GCTCCTTCCTCATCGCCAGT 61.966 60.000 0.00 0.00 0.00 4.00
1304 1572 1.227497 GCTCCTTCCTCATCGCCAG 60.227 63.158 0.00 0.00 0.00 4.85
1308 1576 1.066587 GTCGGCTCCTTCCTCATCG 59.933 63.158 0.00 0.00 0.00 3.84
1336 1604 1.604755 CCGGAGTAGTCGATCTTCCAG 59.395 57.143 0.00 0.00 0.00 3.86
1429 1697 4.642885 AGATAGCTGGAGGAGAATATACGC 59.357 45.833 0.00 0.00 0.00 4.42
1431 1699 7.333528 CAGAGATAGCTGGAGGAGAATATAC 57.666 44.000 0.00 0.00 32.26 1.47
1449 1912 1.693062 CAGACATAGGCAGCCAGAGAT 59.307 52.381 15.80 0.00 0.00 2.75
1450 1913 1.117994 CAGACATAGGCAGCCAGAGA 58.882 55.000 15.80 0.00 0.00 3.10
1451 1914 0.532417 GCAGACATAGGCAGCCAGAG 60.532 60.000 15.80 4.73 0.00 3.35
1452 1915 1.524002 GCAGACATAGGCAGCCAGA 59.476 57.895 15.80 0.32 0.00 3.86
1456 1919 0.531532 ATCACGCAGACATAGGCAGC 60.532 55.000 0.00 0.00 0.00 5.25
1459 1922 0.249073 ACGATCACGCAGACATAGGC 60.249 55.000 0.00 0.00 43.96 3.93
1460 1923 1.335182 AGACGATCACGCAGACATAGG 59.665 52.381 0.00 0.00 43.96 2.57
1461 1924 2.032178 TCAGACGATCACGCAGACATAG 59.968 50.000 0.00 0.00 43.96 2.23
1465 1928 1.585668 CAATCAGACGATCACGCAGAC 59.414 52.381 0.00 0.00 43.96 3.51
1467 1930 1.913317 TCAATCAGACGATCACGCAG 58.087 50.000 0.00 0.00 43.96 5.18
1469 1932 3.796717 TGTTATCAATCAGACGATCACGC 59.203 43.478 0.00 0.00 43.96 5.34
1470 1933 4.085363 GCTGTTATCAATCAGACGATCACG 60.085 45.833 0.00 0.00 37.55 4.35
1496 1959 7.746475 CACACTCTAATTTGTTTAGCTAACTGC 59.254 37.037 5.45 0.42 37.75 4.40
1514 2236 4.333690 GACTGAGACCTAACCACACTCTA 58.666 47.826 0.00 0.00 0.00 2.43
1518 2240 1.884579 TCGACTGAGACCTAACCACAC 59.115 52.381 0.00 0.00 0.00 3.82
1519 2241 1.884579 GTCGACTGAGACCTAACCACA 59.115 52.381 8.70 0.00 35.22 4.17
1520 2242 2.095161 CAGTCGACTGAGACCTAACCAC 60.095 54.545 36.73 0.00 46.59 4.16
1521 2243 2.160205 CAGTCGACTGAGACCTAACCA 58.840 52.381 36.73 0.00 46.59 3.67
1522 2244 2.923605 CAGTCGACTGAGACCTAACC 57.076 55.000 36.73 0.00 46.59 2.85
1532 2254 5.470368 TCTTGGTTAAATCTCAGTCGACTG 58.530 41.667 34.76 34.76 45.08 3.51
1533 2255 5.723672 TCTTGGTTAAATCTCAGTCGACT 57.276 39.130 13.58 13.58 0.00 4.18
1534 2256 6.237595 CGATTCTTGGTTAAATCTCAGTCGAC 60.238 42.308 7.70 7.70 31.15 4.20
1535 2257 5.805486 CGATTCTTGGTTAAATCTCAGTCGA 59.195 40.000 0.00 0.00 31.15 4.20
1536 2258 5.005779 CCGATTCTTGGTTAAATCTCAGTCG 59.994 44.000 0.00 0.00 31.15 4.18
1537 2259 5.875359 ACCGATTCTTGGTTAAATCTCAGTC 59.125 40.000 0.00 0.00 35.82 3.51
1538 2260 5.805728 ACCGATTCTTGGTTAAATCTCAGT 58.194 37.500 0.00 0.00 35.82 3.41
1539 2261 5.874810 TGACCGATTCTTGGTTAAATCTCAG 59.125 40.000 0.00 0.00 40.63 3.35
1540 2262 5.800296 TGACCGATTCTTGGTTAAATCTCA 58.200 37.500 0.00 0.00 40.63 3.27
1541 2263 6.371825 ACTTGACCGATTCTTGGTTAAATCTC 59.628 38.462 0.00 0.00 40.63 2.75
1542 2264 6.149474 CACTTGACCGATTCTTGGTTAAATCT 59.851 38.462 0.00 0.00 40.63 2.40
1543 2265 6.148811 TCACTTGACCGATTCTTGGTTAAATC 59.851 38.462 0.00 0.00 40.63 2.17
1544 2266 6.001460 TCACTTGACCGATTCTTGGTTAAAT 58.999 36.000 0.00 0.00 40.63 1.40
1545 2267 5.237779 GTCACTTGACCGATTCTTGGTTAAA 59.762 40.000 0.00 0.00 40.63 1.52
1546 2268 4.753107 GTCACTTGACCGATTCTTGGTTAA 59.247 41.667 0.00 0.00 40.63 2.01
1547 2269 4.202274 TGTCACTTGACCGATTCTTGGTTA 60.202 41.667 6.91 0.00 44.15 2.85
1548 2270 3.139077 GTCACTTGACCGATTCTTGGTT 58.861 45.455 0.00 0.00 40.63 3.67
1549 2271 2.104111 TGTCACTTGACCGATTCTTGGT 59.896 45.455 6.91 0.00 44.15 3.67
1550 2272 2.766313 TGTCACTTGACCGATTCTTGG 58.234 47.619 6.91 0.00 44.15 3.61
1551 2273 4.033358 GCTATGTCACTTGACCGATTCTTG 59.967 45.833 6.91 0.00 44.15 3.02
1552 2274 4.184629 GCTATGTCACTTGACCGATTCTT 58.815 43.478 6.91 0.00 44.15 2.52
1553 2275 3.195610 TGCTATGTCACTTGACCGATTCT 59.804 43.478 6.91 0.00 44.15 2.40
1554 2276 3.307242 GTGCTATGTCACTTGACCGATTC 59.693 47.826 6.91 0.00 44.15 2.52
1555 2277 3.262420 GTGCTATGTCACTTGACCGATT 58.738 45.455 6.91 0.00 44.15 3.34
1556 2278 2.735444 CGTGCTATGTCACTTGACCGAT 60.735 50.000 6.91 0.00 44.15 4.18
1557 2279 1.402325 CGTGCTATGTCACTTGACCGA 60.402 52.381 6.91 0.00 44.15 4.69
1558 2280 0.992072 CGTGCTATGTCACTTGACCG 59.008 55.000 6.91 0.00 44.15 4.79
1559 2281 2.080286 ACGTGCTATGTCACTTGACC 57.920 50.000 6.91 0.00 44.15 4.02
1560 2282 4.482386 TCTTACGTGCTATGTCACTTGAC 58.518 43.478 0.00 2.19 44.97 3.18
1561 2283 4.776795 TCTTACGTGCTATGTCACTTGA 57.223 40.909 0.00 0.00 34.92 3.02
1562 2284 5.633601 TCTTTCTTACGTGCTATGTCACTTG 59.366 40.000 0.00 0.00 34.92 3.16
1563 2285 5.779922 TCTTTCTTACGTGCTATGTCACTT 58.220 37.500 0.00 0.00 34.92 3.16
1564 2286 5.183331 TCTCTTTCTTACGTGCTATGTCACT 59.817 40.000 0.00 0.00 34.92 3.41
1565 2287 5.399858 TCTCTTTCTTACGTGCTATGTCAC 58.600 41.667 0.00 0.00 0.00 3.67
1566 2288 5.638596 TCTCTTTCTTACGTGCTATGTCA 57.361 39.130 0.00 0.00 0.00 3.58
1567 2289 6.807230 TCTTTCTCTTTCTTACGTGCTATGTC 59.193 38.462 0.00 0.00 0.00 3.06
1568 2290 6.688578 TCTTTCTCTTTCTTACGTGCTATGT 58.311 36.000 0.00 0.00 0.00 2.29
1569 2291 7.582435 TTCTTTCTCTTTCTTACGTGCTATG 57.418 36.000 0.00 0.00 0.00 2.23
1570 2292 8.603242 TTTTCTTTCTCTTTCTTACGTGCTAT 57.397 30.769 0.00 0.00 0.00 2.97
1571 2293 8.428186 TTTTTCTTTCTCTTTCTTACGTGCTA 57.572 30.769 0.00 0.00 0.00 3.49
1572 2294 6.920569 TTTTCTTTCTCTTTCTTACGTGCT 57.079 33.333 0.00 0.00 0.00 4.40
1613 2335 9.860898 CGTAAGATGTTATATTGAGATCCATGA 57.139 33.333 0.00 0.00 43.02 3.07
1614 2336 9.091784 CCGTAAGATGTTATATTGAGATCCATG 57.908 37.037 0.00 0.00 43.02 3.66
1615 2337 9.035890 TCCGTAAGATGTTATATTGAGATCCAT 57.964 33.333 0.00 0.00 43.02 3.41
1616 2338 8.417273 TCCGTAAGATGTTATATTGAGATCCA 57.583 34.615 0.00 0.00 43.02 3.41
1627 2349 9.587772 GTTGATGCTATATCCGTAAGATGTTAT 57.412 33.333 0.00 0.00 43.02 1.89
1628 2350 7.753580 CGTTGATGCTATATCCGTAAGATGTTA 59.246 37.037 0.00 0.00 43.02 2.41
1629 2351 6.586463 CGTTGATGCTATATCCGTAAGATGTT 59.414 38.462 0.00 0.00 43.02 2.71
1630 2352 6.072119 TCGTTGATGCTATATCCGTAAGATGT 60.072 38.462 0.00 0.00 43.02 3.06
1631 2353 6.322491 TCGTTGATGCTATATCCGTAAGATG 58.678 40.000 0.00 0.00 43.02 2.90
1632 2354 6.510879 TCGTTGATGCTATATCCGTAAGAT 57.489 37.500 0.00 0.00 43.02 2.40
1633 2355 5.952526 TCGTTGATGCTATATCCGTAAGA 57.047 39.130 0.00 0.00 43.02 2.10
1634 2356 6.150318 ACTTCGTTGATGCTATATCCGTAAG 58.850 40.000 0.00 0.00 0.00 2.34
1635 2357 6.016527 AGACTTCGTTGATGCTATATCCGTAA 60.017 38.462 0.00 0.00 0.00 3.18
1636 2358 5.472478 AGACTTCGTTGATGCTATATCCGTA 59.528 40.000 0.00 0.00 0.00 4.02
1637 2359 4.278669 AGACTTCGTTGATGCTATATCCGT 59.721 41.667 0.00 0.00 0.00 4.69
1638 2360 4.799678 AGACTTCGTTGATGCTATATCCG 58.200 43.478 0.00 0.00 0.00 4.18
1639 2361 7.371936 ACTAAGACTTCGTTGATGCTATATCC 58.628 38.462 0.00 0.00 0.00 2.59
1640 2362 8.076781 TGACTAAGACTTCGTTGATGCTATATC 58.923 37.037 0.00 0.00 0.00 1.63
1641 2363 7.941919 TGACTAAGACTTCGTTGATGCTATAT 58.058 34.615 0.00 0.00 0.00 0.86
1642 2364 7.329588 TGACTAAGACTTCGTTGATGCTATA 57.670 36.000 0.00 0.00 0.00 1.31
1643 2365 6.208988 TGACTAAGACTTCGTTGATGCTAT 57.791 37.500 0.00 0.00 0.00 2.97
1644 2366 5.638596 TGACTAAGACTTCGTTGATGCTA 57.361 39.130 0.00 0.00 0.00 3.49
1645 2367 4.521130 TGACTAAGACTTCGTTGATGCT 57.479 40.909 0.00 0.00 0.00 3.79
1646 2368 4.686554 AGTTGACTAAGACTTCGTTGATGC 59.313 41.667 0.00 0.00 0.00 3.91
1647 2369 7.869016 TTAGTTGACTAAGACTTCGTTGATG 57.131 36.000 0.00 0.00 33.83 3.07
1660 2382 8.179509 AGTCTTGCTAAGTCTTAGTTGACTAA 57.820 34.615 25.29 3.78 45.49 2.24
1661 2383 7.762588 AGTCTTGCTAAGTCTTAGTTGACTA 57.237 36.000 25.29 9.17 45.49 2.59
1663 2385 8.813643 TTTAGTCTTGCTAAGTCTTAGTTGAC 57.186 34.615 18.72 20.13 40.41 3.18
1664 2386 9.424319 CATTTAGTCTTGCTAAGTCTTAGTTGA 57.576 33.333 18.72 12.22 40.41 3.18
1665 2387 9.424319 TCATTTAGTCTTGCTAAGTCTTAGTTG 57.576 33.333 18.72 10.50 40.41 3.16
1666 2388 9.998106 TTCATTTAGTCTTGCTAAGTCTTAGTT 57.002 29.630 18.72 3.81 40.41 2.24
1676 2398 9.342308 CCCAGATTAATTCATTTAGTCTTGCTA 57.658 33.333 0.00 0.00 35.37 3.49
1677 2399 7.836183 ACCCAGATTAATTCATTTAGTCTTGCT 59.164 33.333 0.00 0.00 35.37 3.91
1678 2400 8.000780 ACCCAGATTAATTCATTTAGTCTTGC 57.999 34.615 0.00 0.00 35.37 4.01
1679 2401 9.793252 CAACCCAGATTAATTCATTTAGTCTTG 57.207 33.333 0.00 0.00 35.37 3.02
1680 2402 9.753674 TCAACCCAGATTAATTCATTTAGTCTT 57.246 29.630 0.00 0.00 35.37 3.01
1681 2403 9.178758 GTCAACCCAGATTAATTCATTTAGTCT 57.821 33.333 0.00 0.00 37.35 3.24
1682 2404 8.122952 CGTCAACCCAGATTAATTCATTTAGTC 58.877 37.037 0.00 0.00 0.00 2.59
1683 2405 7.415206 GCGTCAACCCAGATTAATTCATTTAGT 60.415 37.037 0.00 0.00 0.00 2.24
1695 2417 2.746277 GCCGCGTCAACCCAGATT 60.746 61.111 4.92 0.00 0.00 2.40
1696 2418 3.329542 ATGCCGCGTCAACCCAGAT 62.330 57.895 4.92 0.00 0.00 2.90
1698 2420 3.803082 CATGCCGCGTCAACCCAG 61.803 66.667 4.92 0.00 0.00 4.45
1703 2425 4.695993 TCCTGCATGCCGCGTCAA 62.696 61.111 16.68 0.00 46.97 3.18
1706 2428 4.704833 AAGTCCTGCATGCCGCGT 62.705 61.111 16.68 0.00 46.97 6.01
1707 2429 4.170062 CAAGTCCTGCATGCCGCG 62.170 66.667 16.68 0.00 46.97 6.46
1708 2430 3.818787 CCAAGTCCTGCATGCCGC 61.819 66.667 16.68 2.43 42.89 6.53
1709 2431 2.046023 TCCAAGTCCTGCATGCCG 60.046 61.111 16.68 9.00 0.00 5.69
1710 2432 2.413142 GCTCCAAGTCCTGCATGCC 61.413 63.158 16.68 0.00 0.00 4.40
1711 2433 1.654954 CTGCTCCAAGTCCTGCATGC 61.655 60.000 11.82 11.82 34.79 4.06
1712 2434 1.654954 GCTGCTCCAAGTCCTGCATG 61.655 60.000 0.00 0.00 34.79 4.06
1713 2435 1.378250 GCTGCTCCAAGTCCTGCAT 60.378 57.895 0.00 0.00 34.79 3.96
1714 2436 2.033141 GCTGCTCCAAGTCCTGCA 59.967 61.111 0.00 0.00 0.00 4.41
2066 2788 1.343465 ACGGAGATGACGTGGTTCTTT 59.657 47.619 0.00 0.00 43.78 2.52
2586 3444 1.137513 GTCGTCGGGTCAAACTTGAG 58.862 55.000 0.00 0.00 37.98 3.02
3167 4025 2.592308 CTCCCCTTGCCTACCTGC 59.408 66.667 0.00 0.00 0.00 4.85
3711 4569 1.676006 CTGTCTGCACCCTTCGTTTTT 59.324 47.619 0.00 0.00 0.00 1.94
3712 4570 1.308998 CTGTCTGCACCCTTCGTTTT 58.691 50.000 0.00 0.00 0.00 2.43
3713 4571 0.180406 ACTGTCTGCACCCTTCGTTT 59.820 50.000 0.00 0.00 0.00 3.60
3714 4572 0.532862 CACTGTCTGCACCCTTCGTT 60.533 55.000 0.00 0.00 0.00 3.85
3715 4573 1.069765 CACTGTCTGCACCCTTCGT 59.930 57.895 0.00 0.00 0.00 3.85
3716 4574 1.669115 CCACTGTCTGCACCCTTCG 60.669 63.158 0.00 0.00 0.00 3.79
3717 4575 0.685097 TACCACTGTCTGCACCCTTC 59.315 55.000 0.00 0.00 0.00 3.46
3718 4576 0.396811 GTACCACTGTCTGCACCCTT 59.603 55.000 0.00 0.00 0.00 3.95
3719 4577 0.471971 AGTACCACTGTCTGCACCCT 60.472 55.000 0.00 0.00 0.00 4.34
3720 4578 0.396811 AAGTACCACTGTCTGCACCC 59.603 55.000 0.00 0.00 0.00 4.61
3721 4579 2.256117 AAAGTACCACTGTCTGCACC 57.744 50.000 0.00 0.00 0.00 5.01
3996 4886 1.068333 CACTAACACATGCTGGTTGGC 60.068 52.381 7.92 0.00 0.00 4.52
4023 4913 1.112315 TTCATGTTGTGGGTGTGGGC 61.112 55.000 0.00 0.00 0.00 5.36
4051 4941 0.239347 AGCAGCAGCAATGTCGTTTC 59.761 50.000 3.17 0.00 45.49 2.78
4055 4945 2.202440 GCAGCAGCAGCAATGTCG 60.202 61.111 4.63 0.00 45.49 4.35
4056 4946 1.136984 GAGCAGCAGCAGCAATGTC 59.863 57.895 12.92 0.00 45.49 3.06
4078 4972 5.529289 AGATCCATGTAACTGTTAGGGAGA 58.471 41.667 16.07 7.03 0.00 3.71
4110 5004 6.216801 ACCTAGTATTGTAGCATTGTCGAA 57.783 37.500 0.00 0.00 0.00 3.71
4150 5048 6.291377 AGAATTACACACTGACAGACATTGT 58.709 36.000 10.08 8.54 41.83 2.71
4158 5056 3.814625 TGCCAAGAATTACACACTGACA 58.185 40.909 0.00 0.00 0.00 3.58
4162 5060 5.048504 CAGAACATGCCAAGAATTACACACT 60.049 40.000 0.00 0.00 0.00 3.55
4169 5067 4.119442 GCATCAGAACATGCCAAGAATT 57.881 40.909 0.00 0.00 43.03 2.17
4179 5082 2.490903 GCACTTGGAAGCATCAGAACAT 59.509 45.455 0.00 0.00 0.00 2.71
4186 5089 3.984292 CTTCGCACTTGGAAGCATC 57.016 52.632 0.00 0.00 35.01 3.91
4202 5105 2.803030 ATGCTCCAACTCATCTGCTT 57.197 45.000 0.00 0.00 0.00 3.91
4220 5123 6.072199 ACTTATCCTCTGGCTCAAAGAAAT 57.928 37.500 0.00 0.00 0.00 2.17
4230 5133 2.894765 GAGGGAGTACTTATCCTCTGGC 59.105 54.545 22.82 7.24 41.76 4.85
4244 5147 9.892130 CATCTTATAAAAACTTACAGAGGGAGT 57.108 33.333 0.00 0.00 0.00 3.85
4280 5183 6.940739 AGATGTTCTATGTCAGCACTTTAGT 58.059 36.000 0.00 0.00 0.00 2.24
4281 5184 7.840342 AAGATGTTCTATGTCAGCACTTTAG 57.160 36.000 0.00 0.00 0.00 1.85
4283 5186 9.890629 TTATAAGATGTTCTATGTCAGCACTTT 57.109 29.630 0.00 0.00 0.00 2.66
4284 5187 9.890629 TTTATAAGATGTTCTATGTCAGCACTT 57.109 29.630 0.00 0.00 0.00 3.16
4285 5188 9.890629 TTTTATAAGATGTTCTATGTCAGCACT 57.109 29.630 0.00 0.00 0.00 4.40
4313 5216 9.064706 GCATATGTACTACTACCTCTCTGTAAA 57.935 37.037 4.29 0.00 0.00 2.01
4314 5217 8.215736 TGCATATGTACTACTACCTCTCTGTAA 58.784 37.037 4.29 0.00 0.00 2.41
4315 5218 7.742767 TGCATATGTACTACTACCTCTCTGTA 58.257 38.462 4.29 0.00 0.00 2.74
4316 5219 6.602278 TGCATATGTACTACTACCTCTCTGT 58.398 40.000 4.29 0.00 0.00 3.41
4317 5220 7.534282 CATGCATATGTACTACTACCTCTCTG 58.466 42.308 0.00 0.00 0.00 3.35
4318 5221 6.151985 GCATGCATATGTACTACTACCTCTCT 59.848 42.308 14.21 0.00 36.65 3.10
4319 5222 6.071896 TGCATGCATATGTACTACTACCTCTC 60.072 42.308 18.46 0.00 36.65 3.20
4320 5223 5.775195 TGCATGCATATGTACTACTACCTCT 59.225 40.000 18.46 0.00 36.65 3.69
4321 5224 6.025749 TGCATGCATATGTACTACTACCTC 57.974 41.667 18.46 0.00 36.65 3.85
4322 5225 6.351371 GGATGCATGCATATGTACTACTACCT 60.351 42.308 32.27 6.05 36.70 3.08
4323 5226 5.812642 GGATGCATGCATATGTACTACTACC 59.187 44.000 32.27 19.83 36.70 3.18
4324 5227 6.398095 TGGATGCATGCATATGTACTACTAC 58.602 40.000 32.27 15.05 36.70 2.73
4325 5228 6.603940 TGGATGCATGCATATGTACTACTA 57.396 37.500 32.27 12.89 36.70 1.82
4326 5229 5.488262 TGGATGCATGCATATGTACTACT 57.512 39.130 32.27 8.08 36.70 2.57
4327 5230 5.295292 GGATGGATGCATGCATATGTACTAC 59.705 44.000 32.27 16.96 39.04 2.73
4328 5231 5.430886 GGATGGATGCATGCATATGTACTA 58.569 41.667 32.27 17.77 39.04 1.82
4329 5232 4.267536 GGATGGATGCATGCATATGTACT 58.732 43.478 32.27 10.58 39.04 2.73
4330 5233 3.379372 GGGATGGATGCATGCATATGTAC 59.621 47.826 32.27 20.07 39.04 2.90
4333 5236 2.735151 AGGGATGGATGCATGCATATG 58.265 47.619 32.27 0.00 39.04 1.78
4350 5253 2.825532 CCATCTGTACAAAACCCAAGGG 59.174 50.000 2.91 2.91 42.03 3.95
4351 5254 3.496331 ACCATCTGTACAAAACCCAAGG 58.504 45.455 0.00 0.00 0.00 3.61
4352 5255 6.834168 ATAACCATCTGTACAAAACCCAAG 57.166 37.500 0.00 0.00 0.00 3.61
4393 5313 8.491134 ACAGGCTATTACATTACATGGTCTTAA 58.509 33.333 0.00 0.00 33.60 1.85
4395 5315 6.900194 ACAGGCTATTACATTACATGGTCTT 58.100 36.000 0.00 0.00 33.60 3.01
4402 5322 9.953565 AAACTAAAGACAGGCTATTACATTACA 57.046 29.630 0.00 0.00 0.00 2.41
4414 5334 5.880332 TCACATCCATAAACTAAAGACAGGC 59.120 40.000 0.00 0.00 0.00 4.85
4415 5335 6.878923 TGTCACATCCATAAACTAAAGACAGG 59.121 38.462 0.00 0.00 0.00 4.00
4416 5336 7.905604 TGTCACATCCATAAACTAAAGACAG 57.094 36.000 0.00 0.00 0.00 3.51
4439 5359 8.571336 AGGAGATCAAAGAACTTGTTGTAATTG 58.429 33.333 0.00 0.00 36.34 2.32
4442 5362 8.429641 ACTAGGAGATCAAAGAACTTGTTGTAA 58.570 33.333 0.00 0.00 36.34 2.41
4444 5364 6.831976 ACTAGGAGATCAAAGAACTTGTTGT 58.168 36.000 0.00 0.00 36.34 3.32
4445 5365 8.833231 TTACTAGGAGATCAAAGAACTTGTTG 57.167 34.615 0.00 0.00 36.34 3.33
4447 5367 9.495572 CTTTTACTAGGAGATCAAAGAACTTGT 57.504 33.333 0.00 0.00 36.34 3.16
4448 5368 9.712305 TCTTTTACTAGGAGATCAAAGAACTTG 57.288 33.333 0.00 0.00 36.25 3.16
4450 5370 9.095700 ACTCTTTTACTAGGAGATCAAAGAACT 57.904 33.333 0.00 0.00 31.58 3.01
4452 5372 9.090103 TGACTCTTTTACTAGGAGATCAAAGAA 57.910 33.333 0.00 0.00 31.58 2.52
4453 5373 8.524487 GTGACTCTTTTACTAGGAGATCAAAGA 58.476 37.037 0.00 0.00 0.00 2.52
4454 5374 7.762159 GGTGACTCTTTTACTAGGAGATCAAAG 59.238 40.741 0.00 0.00 0.00 2.77
4457 5377 5.357314 CGGTGACTCTTTTACTAGGAGATCA 59.643 44.000 0.00 0.00 0.00 2.92
4458 5378 5.733937 GCGGTGACTCTTTTACTAGGAGATC 60.734 48.000 0.00 0.00 0.00 2.75
4459 5379 4.098196 GCGGTGACTCTTTTACTAGGAGAT 59.902 45.833 0.00 0.00 0.00 2.75
4460 5380 3.442977 GCGGTGACTCTTTTACTAGGAGA 59.557 47.826 0.00 0.00 0.00 3.71
4461 5381 3.192844 TGCGGTGACTCTTTTACTAGGAG 59.807 47.826 0.00 0.00 0.00 3.69
4462 5382 3.159472 TGCGGTGACTCTTTTACTAGGA 58.841 45.455 0.00 0.00 0.00 2.94
4465 5385 3.682858 GCAATGCGGTGACTCTTTTACTA 59.317 43.478 0.00 0.00 0.00 1.82
4466 5386 2.484264 GCAATGCGGTGACTCTTTTACT 59.516 45.455 0.00 0.00 0.00 2.24
4467 5387 2.851534 GCAATGCGGTGACTCTTTTAC 58.148 47.619 0.00 0.00 0.00 2.01
4481 5401 1.201965 GCGATCTATAAGCCGCAATGC 60.202 52.381 0.00 0.00 46.04 3.56
4482 5402 2.795121 GCGATCTATAAGCCGCAATG 57.205 50.000 0.00 0.00 46.04 2.82
4489 5409 1.896465 ACCAGGAGGCGATCTATAAGC 59.104 52.381 0.00 0.00 39.06 3.09
4499 5419 2.420058 AGGATAAAAACCAGGAGGCG 57.580 50.000 0.00 0.00 39.06 5.52
4514 5434 4.286032 TCCAAACAAGCACTACACTAGGAT 59.714 41.667 0.00 0.00 0.00 3.24
4525 5445 3.940209 TGATTCCATCCAAACAAGCAC 57.060 42.857 0.00 0.00 0.00 4.40
4535 5455 3.530928 TCCATTCCCATGATTCCATCC 57.469 47.619 0.00 0.00 31.07 3.51
4548 5468 3.891366 CCAGATGTTAACCCATCCATTCC 59.109 47.826 2.48 0.00 41.79 3.01
4559 5479 5.163854 CCACTTCGACAATCCAGATGTTAAC 60.164 44.000 0.00 0.00 0.00 2.01
4563 5483 2.936993 GCCACTTCGACAATCCAGATGT 60.937 50.000 0.00 0.00 0.00 3.06
4567 5487 1.970917 GCGCCACTTCGACAATCCAG 61.971 60.000 0.00 0.00 0.00 3.86
4572 5492 0.037697 AGTATGCGCCACTTCGACAA 60.038 50.000 4.18 0.00 0.00 3.18
4576 5496 2.221055 GGAATTAGTATGCGCCACTTCG 59.779 50.000 15.88 0.00 0.00 3.79
4581 5501 2.047061 AGGAGGAATTAGTATGCGCCA 58.953 47.619 4.18 0.00 30.57 5.69
4583 5503 3.498777 GGAAAGGAGGAATTAGTATGCGC 59.501 47.826 0.00 0.00 0.00 6.09
4595 5515 2.041350 ACTAGAGTCACGGAAAGGAGGA 59.959 50.000 0.00 0.00 0.00 3.71
4597 5517 3.082548 TCACTAGAGTCACGGAAAGGAG 58.917 50.000 0.00 0.00 0.00 3.69
4612 5532 4.222886 CGACGCCAGAGATAAATCACTAG 58.777 47.826 0.00 0.00 0.00 2.57
4613 5533 3.550233 GCGACGCCAGAGATAAATCACTA 60.550 47.826 9.14 0.00 0.00 2.74
4614 5534 2.799917 GCGACGCCAGAGATAAATCACT 60.800 50.000 9.14 0.00 0.00 3.41
4616 5536 1.136110 TGCGACGCCAGAGATAAATCA 59.864 47.619 18.69 0.00 0.00 2.57
4617 5537 1.852942 TGCGACGCCAGAGATAAATC 58.147 50.000 18.69 0.00 0.00 2.17
4618 5538 2.138320 CATGCGACGCCAGAGATAAAT 58.862 47.619 18.69 0.00 0.00 1.40
4619 5539 1.134818 ACATGCGACGCCAGAGATAAA 60.135 47.619 18.69 0.00 0.00 1.40
4620 5540 0.459899 ACATGCGACGCCAGAGATAA 59.540 50.000 18.69 0.00 0.00 1.75
4622 5542 1.086067 CAACATGCGACGCCAGAGAT 61.086 55.000 18.69 0.00 0.00 2.75
4623 5543 1.737735 CAACATGCGACGCCAGAGA 60.738 57.895 18.69 0.00 0.00 3.10
4624 5544 1.086067 ATCAACATGCGACGCCAGAG 61.086 55.000 18.69 6.87 0.00 3.35
4625 5545 0.673333 AATCAACATGCGACGCCAGA 60.673 50.000 18.69 8.21 0.00 3.86
4626 5546 0.521867 CAATCAACATGCGACGCCAG 60.522 55.000 18.69 12.20 0.00 4.85
4627 5547 0.952984 TCAATCAACATGCGACGCCA 60.953 50.000 18.69 5.87 0.00 5.69
4628 5548 0.378257 ATCAATCAACATGCGACGCC 59.622 50.000 18.69 0.00 0.00 5.68
4629 5549 1.459756 CATCAATCAACATGCGACGC 58.540 50.000 14.19 14.19 0.00 5.19
4630 5550 1.459756 GCATCAATCAACATGCGACG 58.540 50.000 0.00 0.00 36.33 5.12
4631 5551 1.402968 AGGCATCAATCAACATGCGAC 59.597 47.619 0.00 0.00 45.47 5.19
4632 5552 1.753930 AGGCATCAATCAACATGCGA 58.246 45.000 0.00 0.00 45.47 5.10
4633 5553 2.031420 CCTAGGCATCAATCAACATGCG 60.031 50.000 0.00 0.00 45.47 4.73
4634 5554 2.295349 CCCTAGGCATCAATCAACATGC 59.705 50.000 2.05 0.00 44.06 4.06
4658 5578 4.156664 TCTACTACAACAAGCTCGACAC 57.843 45.455 0.00 0.00 0.00 3.67
4674 5594 2.368875 CAAACACACAGGGGACTCTACT 59.631 50.000 0.00 0.00 40.21 2.57
4675 5595 2.104281 ACAAACACACAGGGGACTCTAC 59.896 50.000 0.00 0.00 40.21 2.59
4683 5603 3.866883 AGAAAACACAAACACACAGGG 57.133 42.857 0.00 0.00 0.00 4.45
4748 5668 9.113838 CTGAACTGCAAAAGGAGTTGTATATAT 57.886 33.333 7.11 0.00 32.47 0.86
4774 5700 9.415544 ACATTAGTCTTCAAAATCTGAAATTGC 57.584 29.630 2.05 0.00 43.54 3.56
4788 5714 3.521560 GATGACCGCACATTAGTCTTCA 58.478 45.455 0.00 0.00 35.73 3.02
4789 5715 2.535984 CGATGACCGCACATTAGTCTTC 59.464 50.000 0.00 0.00 33.59 2.87
4791 5717 1.202417 CCGATGACCGCACATTAGTCT 60.202 52.381 0.00 0.00 36.84 3.24
4792 5718 1.209128 CCGATGACCGCACATTAGTC 58.791 55.000 0.00 0.00 36.84 2.59
4793 5719 0.535335 ACCGATGACCGCACATTAGT 59.465 50.000 0.00 0.00 36.84 2.24
4794 5720 0.930310 CACCGATGACCGCACATTAG 59.070 55.000 0.00 0.00 36.84 1.73
4800 5726 1.228003 AAAACCACCGATGACCGCA 60.228 52.632 0.00 0.00 36.84 5.69
4803 5729 1.950909 TCAACAAAACCACCGATGACC 59.049 47.619 0.00 0.00 0.00 4.02
4804 5730 2.604614 GCTCAACAAAACCACCGATGAC 60.605 50.000 0.00 0.00 0.00 3.06
4810 5736 1.686052 TGATGGCTCAACAAAACCACC 59.314 47.619 0.00 0.00 34.36 4.61
4813 5739 2.738314 GCATTGATGGCTCAACAAAACC 59.262 45.455 2.25 0.00 43.92 3.27
4836 5762 6.683974 ATTGTGGCAGTTGATGTAGTATTC 57.316 37.500 0.00 0.00 0.00 1.75
4839 5765 5.423931 TCCTATTGTGGCAGTTGATGTAGTA 59.576 40.000 0.00 0.00 0.00 1.82
4840 5766 4.225042 TCCTATTGTGGCAGTTGATGTAGT 59.775 41.667 0.00 0.00 0.00 2.73
4841 5767 4.572389 GTCCTATTGTGGCAGTTGATGTAG 59.428 45.833 0.00 0.00 0.00 2.74
4842 5768 4.225042 AGTCCTATTGTGGCAGTTGATGTA 59.775 41.667 0.00 0.00 0.00 2.29
4843 5769 3.009473 AGTCCTATTGTGGCAGTTGATGT 59.991 43.478 0.00 0.00 0.00 3.06
4844 5770 3.614092 AGTCCTATTGTGGCAGTTGATG 58.386 45.455 0.00 0.00 0.00 3.07
4845 5771 4.307032 AAGTCCTATTGTGGCAGTTGAT 57.693 40.909 0.00 0.00 0.00 2.57
4847 5773 3.820467 TCAAAGTCCTATTGTGGCAGTTG 59.180 43.478 0.00 0.00 0.00 3.16
4848 5774 4.098914 TCAAAGTCCTATTGTGGCAGTT 57.901 40.909 0.00 0.00 0.00 3.16
4849 5775 3.788227 TCAAAGTCCTATTGTGGCAGT 57.212 42.857 0.00 0.00 0.00 4.40
4850 5776 4.096984 GGAATCAAAGTCCTATTGTGGCAG 59.903 45.833 0.00 0.00 31.94 4.85
4851 5777 4.016444 GGAATCAAAGTCCTATTGTGGCA 58.984 43.478 0.00 0.00 31.94 4.92
4852 5778 4.016444 TGGAATCAAAGTCCTATTGTGGC 58.984 43.478 0.00 0.00 36.03 5.01
4853 5779 6.588719 TTTGGAATCAAAGTCCTATTGTGG 57.411 37.500 0.00 0.00 37.89 4.17
4854 5780 9.740239 CATATTTGGAATCAAAGTCCTATTGTG 57.260 33.333 0.00 0.00 44.87 3.33
4855 5781 8.416329 GCATATTTGGAATCAAAGTCCTATTGT 58.584 33.333 0.00 0.00 44.87 2.71
4857 5783 8.537728 TGCATATTTGGAATCAAAGTCCTATT 57.462 30.769 0.00 0.00 44.87 1.73
4858 5784 8.537728 TTGCATATTTGGAATCAAAGTCCTAT 57.462 30.769 0.00 0.00 44.87 2.57
4859 5785 7.953005 TTGCATATTTGGAATCAAAGTCCTA 57.047 32.000 0.00 0.00 44.87 2.94
4860 5786 6.855763 TTGCATATTTGGAATCAAAGTCCT 57.144 33.333 0.00 0.00 44.87 3.85
4861 5787 9.252962 CTATTTGCATATTTGGAATCAAAGTCC 57.747 33.333 0.00 0.00 44.87 3.85
4872 5798 9.814899 TTGTGGTAAATCTATTTGCATATTTGG 57.185 29.630 5.98 0.00 34.62 3.28
4880 5806 7.962917 CCAAATGTTGTGGTAAATCTATTTGC 58.037 34.615 0.00 0.00 34.60 3.68
4893 5819 4.511082 GGAATGTTGAACCAAATGTTGTGG 59.489 41.667 0.00 0.00 42.28 4.17
4894 5820 5.114780 TGGAATGTTGAACCAAATGTTGTG 58.885 37.500 0.00 0.00 37.29 3.33
4895 5821 5.350504 TGGAATGTTGAACCAAATGTTGT 57.649 34.783 0.00 0.00 37.29 3.32
4896 5822 6.225318 AGATGGAATGTTGAACCAAATGTTG 58.775 36.000 0.00 0.00 37.29 3.33
4897 5823 6.041865 TGAGATGGAATGTTGAACCAAATGTT 59.958 34.615 0.00 0.00 40.81 2.71
4898 5824 5.539574 TGAGATGGAATGTTGAACCAAATGT 59.460 36.000 0.00 0.00 37.24 2.71
4904 5830 3.420893 TGGTGAGATGGAATGTTGAACC 58.579 45.455 0.00 0.00 0.00 3.62
4916 5842 5.823209 TCATAACTGCATTTGGTGAGATG 57.177 39.130 0.00 0.00 0.00 2.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.